HHsearch alignment for GI: 255764490 and conserved domain: PRK12315

>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.
Probab=99.85  E-value=4.1e-21  Score=155.47  Aligned_cols=227  Identities=16%  Similarity=0.225  Sum_probs=145.3

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCEEEE--CCCCHHHHHHH
Q ss_conf             76343888999999999899999999999999789877722058987899999996238-9989994--30068999997
Q gi|255764490|r   42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMIT--AYREHGHILAC  118 (364)
Q Consensus        42 ~~~~~ls~e~l~~~yr~M~~~R~~e~~~~~l~~qg~i~g~~~~~~GqEa~~vg~~~al~-~~D~~~~--~yR~~~~~l~~  118 (364)
T Consensus        10 ~dlk~l~~~~L~~la~---~iR~~~i~~v~--~~~---GH~g~~lg~~el~~alh~~f~~p~Dr~v~s~GH~sY~~~~Lt   81 (581)
T PRK12315         10 KDIKKLSLEELEQLAT---EIRTALLEKDS--AHG---GHVGPNLGVVELTIALHYVFNSPKDKIVWDVSHQSYPHKMLT   81 (581)
T ss_pred             HHHHHCCHHHHHHHHH---HHHHHHHHHHH--HCC---CCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
T ss_conf             9986299999999999---99999999974--438---867857689999999998528988874773761789999995


Q ss_pred             HHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             4212-222343210123443455677321112212367667466767432543100112334444331025665430245
Q gi|255764490|r  119 GVDA-SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV  197 (364)
Q Consensus       119 G~~~-~~~~ae~~gk~~g~~~Gr~gs~H~~~~~~~~~~~~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f  197 (364)
T Consensus        82 gr~~~~~~~~~~----~~l----~g~~~~~e~~~d~-~~tG~~g~gls~avGmA~A~~~~~~~~~v~~v~GDG~l~eG~~  152 (581)
T PRK12315         82 GRKEAFLDPDHY----DDV----TGYTNPEESEHDF-FTVGHTSTSIALATGMAKARDLKGEKENIIAVIGDGSLSGGLA  152 (581)
T ss_pred             CCCCCCCCCHHC----CCC----CCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
T ss_conf             660116861212----888----8989898888987-7877637899999999999997299984899985513440167


Q ss_pred             HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC---------CCCCCHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHCCC
Q ss_conf             67654432114011102210343444443232---------14864357777763111121-000023368875421024
Q gi|255764490|r  198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRA---------SAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAY  267 (364)
Q Consensus       198 ~Ealn~A~~~~lPvifvvenN~~aist~~~~~---------~~~~~i~~ra~~~gi~~~~v-DG~D~~~v~~~~~~a~~~  267 (364)
T Consensus       153 ~EA~~~Ag~~~~nlivi~ddN~isI~~~~~~~~~~~~~~~~~~~~~~~~~fe~~G~~~~~v~DGhd~~~i~~al~~ak~-  231 (581)
T PRK12315        153 FEGLNNAAELKSNLIIIVNDNQMSIAENHGGLYKNLKELRDTNGQSENNLFKAMGLDYRYVEDGNDLESLIELFKEVKD-  231 (581)
T ss_pred             HHHHHHHCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH-
T ss_conf             9998763458985599997688023587307777778877503755010699849868825799999999999999863-


Q ss_pred             CCCCCCCEEEEECCCCCCCCCC
Q ss_conf             5545465589831566887666
Q gi|255764490|r  268 CRAHKGPIIIEMLTYRYRGHSM  289 (364)
Q Consensus       268 ~r~~~gP~lie~~tyR~~gHs~  289 (364)
T Consensus       232 ---~~~P~~I~v~T~kG~G~~~  250 (581)
T PRK12315        232 ---IDHPIVLHIHTLKGKGYKP  250 (581)
T ss_pred             ---CCCCEEEEEEECCCCCCCC
T ss_conf             ---6999799999678636661