HHsearch alignment for GI: 255764490 and conserved domain: TIGR00759
>TIGR00759 aceE 2-oxo-acid dehydrogenase E1 component, homodimeric type; InterPro: IPR004660 Most members of this family are pyruvate dehydrogenase complex, E1 component. It includes a counterexample from Pseudomonas putida, MdeB, that is active as an E1 component of an alpha-ketoglutarate dehydrogenase complex rather than a pyruvate dehydrogenase complex. The second pyruvate dehydrogenase complex E1 protein from Alcaligenes eutrophus, PdhE, complements an aceE mutant of Escherichia coli but is not part of a pyruvate dehydrogenase complex operon, is more similar to the Pseudomonas putida MdeB than to E. coli AceE, and may have also have a different primary specificity. ; GO: 0016491 oxidoreductase activity.
Probab=97.94 E-value=9e-06 Score=57.12 Aligned_cols=154 Identities=19% Similarity=0.202 Sum_probs=95.6
Q ss_pred CCCCCCCCCCCC-------CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-HHHHHHHCCCCCCCCCCCCCCC-CCCHHH
Q ss_conf 254310011233-------4444331025665430245676544321140-1110221034344444323214-864357
Q gi|255764490|r 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASA-QTNFSK 237 (364)
Q Consensus 167 A~G~A~a~k~~~-------~~~v~v~~~GDGa~~eG~f~Ealn~A~~~~l-PvifvvenN~~aist~~~~~~~-~~~i~~ 237 (364)
T Consensus 203 AIYQARF~kYL~~RGlk~~~d~~VwaFLGDGEMDEPES~Ga~~~AarE~LDNL~FviNCNLQRLDGPVrGNGKIIQELEs 282 (905)
T TIGR00759 203 AIYQARFLKYLENRGLKDTSDQKVWAFLGDGEMDEPESKGAITFAAREKLDNLVFVINCNLQRLDGPVRGNGKIIQELES 282 (905)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99998987765404774202775899847875571877999876655237541788632130368754157412011243
Q ss_pred HHHHHHH---------------------------------------------------------------------HHHH
Q ss_conf 7777631---------------------------------------------------------------------1112
Q gi|255764490|r 238 RGVSFNI---------------------------------------------------------------------PGMQ 248 (364)
Q Consensus 238 ra~~~gi---------------------------------------------------------------------~~~~ 248 (364)
T Consensus 283 lF~GAGWNVIKV~WGS~WD~Ll~~D~~G~L~~~m~~~vDG~yQT~kA~DGaY~REHFFn~~Pel~ALV~dmsD~dIw~Ln 362 (905)
T TIGR00759 283 LFRGAGWNVIKVLWGSEWDALLARDTSGVLVKLMNETVDGDYQTYKAKDGAYVREHFFNRTPELKALVADMSDADIWALN 362 (905)
T ss_pred HCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCCCCCCHHHHHHHHCCCHHHHHHHC
T ss_conf 12688831788840885689987151337899985258973000002688631043468887899986167878999740
Q ss_pred HHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC---CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC
Q ss_conf 10000233688754210245545465589831566887---666787667899999998983893799999999878999
Q gi|255764490|r 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG---HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 (364)
Q Consensus 249 vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~tyR~~g---Hs~~D~~~YR~~~Ei~~~~~~~DPI~~~~~~L~~~g~~t 325 (364)
T Consensus 363 RGGHD~~K~YAAy~~A~~~---KG~PTvILAkTiKGYg~g~~~e~rN----~AHQ~KK--l~~~~lk~fRD~f-~lP-ls 431 (905)
T TIGR00759 363 RGGHDPRKVYAAYAAAQEH---KGKPTVILAKTIKGYGLGDAAEARN----VAHQVKK--LEVDALKEFRDRF-ELP-LS 431 (905)
T ss_pred CCCCCHHHHHHHHHHHHCC---CCCCEEEECCCCCCCCCCHHHHHCC----HHHHHCC--CCHHHHHHHHHHC-CCC-CC
T ss_conf 6799738899999998628---9984786054346646764332201----3553056--6878898420002-488-77
Q ss_pred HHHHHH
Q ss_conf 899999
Q gi|255764490|r 326 EGDLKE 331 (364)
Q Consensus 326 e~e~~~ 331 (364)
T Consensus 432 D~QvE~ 437 (905)
T TIGR00759 432 DAQVEK 437 (905)
T ss_pred HHHHHH
T ss_conf 677730