HHsearch alignment for GI: 255764490 and conserved domain: TIGR03186

>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. Several bacterial species have a paralog to homodimeric form of the pyruvate dehydrogenase E1 component (see model TIGR00759), often encoded next to L-methionine gamma-lyase gene (mdeA). The member from a strain of Pseudomonas putida was shown to act on alpha-ketobutyrate, which is produced by MdeA.This model serves as an exception model to TIGR00759, as other proteins hitting TIGR00759 should be identified as the pyruvate dehydrogenase E1 component.
Probab=97.97  E-value=4.3e-06  Score=59.20  Aligned_cols=119  Identities=22%  Similarity=0.260  Sum_probs=78.7

Q ss_pred             CCCCCCCCCCCCC-------CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCH-HHHHHHCCCCCCCCCCCCCCC-CCCHH
Q ss_conf             3254310011233-------44443310256654302456765443211401-110221034344444323214-86435
Q gi|255764490|r  166 LGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIENNQYAMGTSVSRASA-QTNFS  236 (364)
Q Consensus       166 ~A~G~A~a~k~~~-------~~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lP-vifvvenN~~aist~~~~~~~-~~~i~  236 (364)
T Consensus       197 ~aIYQArf~kYL~~Rgl~~~~~~kVWaflGDGEmDEPEs~gai~lA~rE~LDNLifVvNCNLQRLDGPVrGNgkIiqELE  276 (889)
T TIGR03186       197 NAIYQARFMRYLQNRGLARTEGRKVWGFFGDGEMDEPESIGALSLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELE  276 (889)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf             89999999999986699876788289993587668713333321566605777699995676546888468528889988


Q ss_pred             HHHH-----------------------------------------------------HH----------------HHHHH
Q ss_conf             7777-----------------------------------------------------76----------------31111
Q gi|255764490|r  237 KRGV-----------------------------------------------------SF----------------NIPGM  247 (364)
Q Consensus       237 ~ra~-----------------------------------------------------~~----------------gi~~~  247 (364)
T Consensus       277 ~~FrGAGWnVIKviWG~~WD~Ll~~D~~G~L~~rm~e~vDG~yQ~~~a~~Gay~Re~fFg~~pel~~lv~~~sD~~i~~L  356 (889)
T TIGR03186       277 SQFAGAGWNVIKVLWGSDWDALFARDATGALARAFAHTVDGQFQTFSANDGAYNRARFFGQDPALAALVAHLSDEDIDRL  356 (889)
T ss_pred             HHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
T ss_conf             77355885269986678578998528856799998854472878763467899999980899899999850899999860


Q ss_pred             HHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf             2100002336887542102455454655898315668876
Q gi|255764490|r  248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH  287 (364)
Q Consensus       248 ~vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~tyR~~gH  287 (364)
T Consensus       357 ~RGGHDp~KvyAAy~~A~~h---kG~PTVILakTvKGyGl  393 (889)
T TIGR03186       357 RRGGHDARKLYAAYDRAVRH---EGRPTVILAKTMKGFGM  393 (889)
T ss_pred             HCCCCCHHHHHHHHHHHHHC---CCCCEEEEEECEEECCC
T ss_conf             15799829999999999857---89985998423243564