HHsearch alignment for GI: 255764490 and conserved domain: cd02001
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase). Methanococcus jannaschii sulfopyruvate decarboxylase (ComDE) is a dodecamer of six alpha (D) subunits and six (E) beta subunits which, catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde in the coenzyme M pathway. Ppyr decarboxylase is a homotrimeric enzyme which functions in the biosynthesis of C-P compounds such as bialaphos tripeptide in Streptomyces hygroscopicus. Ppyr decarboxylase and ComDE require TPP and divalent metal cation cofactors.
Probab=98.99 E-value=1.6e-10 Score=87.66 Aligned_cols=118 Identities=22% Similarity=0.336 Sum_probs=83.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHCC-CHHHHHHHCCC-CCCCC
Q ss_conf 22123676674667674325431001123344443310256654--3024567654432114-01110221034-34444
Q gi|255764490|r 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA--NQGQVYESFNIAALWN-LNVIYVIENNQ-YAMGT 224 (364)
Q Consensus 149 ~~~~~~~~~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~--~eG~f~Ealn~A~~~~-lPvifvvenN~-~aist 224 (364)
T Consensus 34 ~~~~f~~-~GsMG~~~~~alG~al~~p----~-kVi~idGDGs~lM~lg~----LaTi~~~~~~nl~~ivlnN~~~~s~G 103 (157)
T cd02001 34 RDGHFYM-LGSMGLAGSIGLGLALGLS----R-KVIVVDGDGSLLMNPGV----LLTAGEFTPLNLILVVLDNRAYGSTG 103 (157)
T ss_pred CCCCEEE-ECHHHHHHHHHHHHHHCCC----C-CEEEEECCHHHHHCCCH----HHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf 8886686-5401328899999985389----9-68999575588752461----99998638988799999797532467
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
Q ss_conf 4323214864357777763111121000023368875421024554546558983156
Q gi|255764490|r 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 (364)
Q Consensus 225 ~~~~~~~~~~i~~ra~~~gi~~~~vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~ty 282 (364)
T Consensus 104 gQ~t~~~~~df~~iA~a~G~~~~~v~--~~~el~~al~~~l----~~~GP~fIeV~I~ 155 (157)
T cd02001 104 GQPTPSSNVNLEAWAAACGYLVLSAP--LLGGLGSEFAGLL----ATTGPTLLHAPIA 155 (157)
T ss_pred CCCCCCCCCCHHHHHHHCCCCEEEEC--CHHHHHHHHHHHH----CCCCCEEEEEEEC
T ss_conf 85675446699999998698579958--9999999999998----4999989999956