HHsearch alignment for GI: 255764490 and conserved domain: cd02006
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl). E. coli glyoxylate carboligase, plays a key role in glyoxylate metabolism where it catalyzes the condensation of two molecules of glyoxylate to give tartronic semialdehyde and carbon dioxide. This enzyme requires TPP, magnesium ion and FAD as cofactors.
Probab=99.36 E-value=1.2e-13 Score=107.73 Aligned_cols=122 Identities=20% Similarity=0.264 Sum_probs=90.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCC-CCCC----------
Q ss_conf 76674667674325431001123344443310256654302456765443211401110221034-3444----------
Q gi|255764490|r 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ-YAMG---------- 223 (364)
Q Consensus 155 ~~~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifvvenN~-~ais---------- 223 (364)
T Consensus 54 ~~~g~mG~glPaAiGaklA----~Pdr~Vv~i~GDGsf~m~-~~E-L~Ta~r~~lpii~vV~NN~~~g~ir~~q~~~~~~ 127 (202)
T cd02006 54 GQAGPLGWTVPAALGVAAA----DPDRQVVALSGDYDFQFM-IEE-LAVGAQHRIPYIHVLVNNAYLGLIRQAQRAFDMD 127 (202)
T ss_pred CCCCHHHHHHHHHHHHHHH----CCCCEEEEEECCCCHHHH-HHH-HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCC
T ss_conf 9987033189999999987----699859999768405512-999-9999996998399999795568999999985347
Q ss_pred ----CCCCCC------CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
Q ss_conf ----443232------1486435777776311112100002336887542102455454655898315668
Q gi|255764490|r 224 ----TSVSRA------SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 (364)
Q Consensus 224 ----t~~~~~------~~~~~i~~ra~~~gi~~~~vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~tyR~ 284 (364)
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~D~~kiAea~G~~g~rV~--~~~eL~~Al~~A~~~~~~~~~P~lIeviidr~ 196 (202)
T cd02006 128 YQVNLAFENINSSELGGYGVDHVKVAEGLGCKAIRVT--KPEELAAAFEQAKKLMAEHRVPVVVEAILERV 196 (202)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEC--CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf 4423254666885446789899999997899899979--99999999999998751479978999997671