HHsearch alignment for GI: 255764490 and conserved domain: cd02007

>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=99.84  E-value=3.1e-22  Score=162.67  Aligned_cols=124  Identities=23%  Similarity=0.388  Sum_probs=108.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             36766746676743254310011233444433102566543024567654432114011102210343444443232148
Q gi|255764490|r  153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ  232 (364)
Q Consensus       153 ~~~~~~~vg~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifvvenN~~aist~~~~~~~~  232 (364)
T Consensus        70 ~~~stGsLG~Gls~a~G~Ala~k~~~~~~~v~~l~GDGEl~EG~~wEA~~~A~~~~~nli~iid~N~~~i~~~~~-----  144 (195)
T cd02007          70 DAFGTGHSSTSISAALGMAVARDLKGKKRKVIAVIGDGALTGGMAFEALNNAGYLKSNMIVILNDNEMSISPNVG-----  144 (195)
T ss_pred             CEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCC-----
T ss_conf             845886468899999999999956799984999977811401899999999765189869999679876148866-----


Q ss_pred             CCHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
Q ss_conf             643577777631111-210000233688754210245545465589831566887
Q gi|255764490|r  233 TNFSKRGVSFNIPGM-QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG  286 (364)
Q Consensus       233 ~~i~~ra~~~gi~~~-~vDG~D~~~v~~~~~~a~~~~r~~~gP~lie~~tyR~~g  286 (364)
T Consensus       145 -~~~~~f~afGw~~v~~vDGhd~~~i~~al~~a~----~~~~P~~Iia~TikGkG  194 (195)
T cd02007         145 -TPGNLFEELGFRYIGPVDGHNIEALIKVLKEVK----DLKGPVLLHVVTKKGKG  194 (195)
T ss_pred             -CCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHH----HCCCCEEEEEEEECCCC
T ss_conf             -642368774886778607899999999999986----28999899999641508