HHsearch alignment for GI: 255764490 and conserved domain: cd07038

>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=92.13  E-value=0.073  Score=32.08  Aligned_cols=95  Identities=14%  Similarity=0.178  Sum_probs=52.7

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCC---CCCCCCCCCCCCCHH---HHHHHHHHHHHHHHCCH
Q ss_conf             444331025665430245676544321140111022103434---444432321486435---77777631111210000
Q gi|255764490|r  180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA---MGTSVSRASAQTNFS---KRGVSFNIPGMQVDGMD  253 (364)
Q Consensus       180 ~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifvvenN~~a---ist~~~~~~~~~~i~---~ra~~~gi~~~~vDG~D  253 (364)
T Consensus        60 ~gv~~~t~GPG~tN---~~tgl~~A~~d~~Pvl~isG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itk~~~~v--~~  134 (162)
T cd07038          60 LGALVTTYGVGELS---ALNGIAGAYAEHVPVVHIVGAPSTKAQASGLLLHHTLGDGDFDVFLKMFEEITCAAARL--TD  134 (162)
T ss_pred             CEEEEECCCCCHHH---HHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEE--CC
T ss_conf             65666557871888---99999999983898799968877556525763001126521699999998673288992--99


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf             23368875421024554546558983
Q gi|255764490|r  254 IRAVKATMDKAVAYCRAHKGPIIIEM  279 (364)
Q Consensus       254 ~~~v~~~~~~a~~~~r~~~gP~lie~  279 (364)
T Consensus       135 ~~~~~~~l~~A~~~A~~~~gPV~l~i  160 (162)
T cd07038         135 PENAAEEIDRVLRTALRESRPVYIEI  160 (162)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             99999999999999842898889963