RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|255764491|ref|YP_003065078.2| hypothetical protein
CLIBASIA_02760 [Candidatus Liberibacter asiaticus str. psy62]
         (55 letters)



>gnl|CDD|39015 KOG3811, KOG3811, KOG3811, Transcription factor AP-2
           [Transcription].
          Length = 434

 Score = 23.8 bits (51), Expect = 9.7
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 19  CEYGRPYNGLGKRLEKYNNQRTQQDGK 45
             YG P N L  +   +   RT+Q   
Sbjct: 81  DPYGIPLNPLHAQPLPWPGYRTRQGAG 107


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.317    0.137    0.383 

Gapped
Lambda     K      H
   0.267   0.0557    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 608,179
Number of extensions: 20639
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 2
Length of query: 55
Length of database: 6,263,737
Length adjustment: 28
Effective length of query: 27
Effective length of database: 5,658,685
Effective search space: 152784495
Effective search space used: 152784495
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.4 bits)