RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|255764491|ref|YP_003065078.2| hypothetical protein CLIBASIA_02760 [Candidatus Liberibacter asiaticus str. psy62] (55 letters) >gnl|CDD|39015 KOG3811, KOG3811, KOG3811, Transcription factor AP-2 [Transcription]. Length = 434 Score = 23.8 bits (51), Expect = 9.7 Identities = 8/27 (29%), Positives = 11/27 (40%) Query: 19 CEYGRPYNGLGKRLEKYNNQRTQQDGK 45 YG P N L + + RT+Q Sbjct: 81 DPYGIPLNPLHAQPLPWPGYRTRQGAG 107 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.317 0.137 0.383 Gapped Lambda K H 0.267 0.0557 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 608,179 Number of extensions: 20639 Number of successful extensions: 36 Number of sequences better than 10.0: 1 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 2 Length of query: 55 Length of database: 6,263,737 Length adjustment: 28 Effective length of query: 27 Effective length of database: 5,658,685 Effective search space: 152784495 Effective search space used: 152784495 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 50 (23.4 bits)