RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|255764491|ref|YP_003065078.2| hypothetical protein CLIBASIA_02760 [Candidatus Liberibacter asiaticus str. psy62] (55 letters) >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 Score = 27.9 bits (61), Expect = 0.57 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 9/36 (25%) Query: 22 GRPYNGLGKRLEKYNNQRTQQ--DGKQIREKYVTQM 55 GRPY G + + +T++ D K ++ KY T + Sbjct: 870 GRPYTG-------WVDSKTKEPVDDKDVKAKYETSI 898 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.317 0.137 0.383 Gapped Lambda K H 0.267 0.0488 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 444,414 Number of extensions: 13296 Number of successful extensions: 22 Number of sequences better than 10.0: 1 Number of HSP's gapped: 22 Number of HSP's successfully gapped: 1 Length of query: 55 Length of database: 5,693,230 Length adjustment: 27 Effective length of query: 28 Effective length of database: 5,038,642 Effective search space: 141081976 Effective search space used: 141081976 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 50 (23.6 bits)