HHsearch alignment for GI: 255764494 and conserved domain: TIGR02529
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein; InterPro: IPR013366 Salmonella typhimurium is capable of growth on ethanolamine as a sole source of carbon nitrogen and energy . During growth on this compound the cells form a multimolecular structure known as a metabolosome, which is similar to the carboxysome used by some photosynthetic bacteria to fix CO2, and is thought to contain the enzymes needed to metabolise this compound to acetyl-CoA. The metabolosome is not directly involved in the biochemistry of ethanolamine utilization - instead its role is thought to be to concentrate the enzymes involved in this process, while also protecting the cell from the build-up of toxic intermediates . The genes involved in growth on ethanolamine are encoded in a 17-gene operon known as the ethanolamine utilization (eut) operon. EutJ shows similarity to chaperonins and may play a role in assembly of the metabolosme , though it is not necessary for growth on this compound..
Probab=99.64 E-value=9.3e-16 Score=138.10 Aligned_cols=192 Identities=26% Similarity=0.421 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 99999999999983884733698537788740257886344211222222221024788886034456550799872441
Q gi|255764494|r 118 IVLQKMKETAESFLGETVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALAYGLDKKDARTVIVFDFGGG 197 (652)
Q Consensus 118 ~iL~~lk~~ae~~l~~~v~~~VitVP~~f~~~qR~a~~~Aa~~AGl~v~~li~EptAAal~Y~~~~~~~~~vlV~D~Ggg 197 (652)
T Consensus 44 ~iV~rLK~~lE~klG~~lt~A~~A~PPGt~~~~~k~~vNV~EsAG~eV~~V~DEPTAAa~v--L~i---~nG~VVDvGGG 118 (240)
T TIGR02529 44 EIVKRLKDKLEKKLGIELTHAATAVPPGTEEGDVKVIVNVVESAGIEVLKVLDEPTAAAAV--LQI---KNGAVVDVGGG 118 (240)
T ss_pred HHHHHHHHHHHHHHCCEEEECCEECCCCCCCCCEEEEEEEEECCCEEEEEEECCHHHHHHH--HCC---CCCEEEEECCC
T ss_conf 8999999888888094564131500897588975899998722561576651427899987--288---57279984788
Q ss_pred EEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 14543101023146542013322455213447665536787642013430244789999999999885411556503586
Q gi|255764494|r 198 TFDVSLLEMGDGVFEVKATNGDTFLGGEDFDSCLVEHICDTFKKENGIDLKQDTLALQRLKEAAEKAKIELSSTSQTEIN 277 (652)
Q Consensus 198 t~dvsi~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~d~~~~~~a~~rL~~~~e~aK~~LS~~~~~~i~ 277 (652)
T Consensus 119 TTGiSI~--K~GKViy--~-ADEpTGGtHm~LV~AG--------~ygi~~E-----------EAEe~K~~~--k~e~E~- 171 (240)
T TIGR02529 119 TTGISIL--KKGKVIY--S-ADEPTGGTHMSLVLAG--------AYGISFE-----------EAEEIKRDK--KKEEEV- 171 (240)
T ss_pred CEEEEEE--ECCCEEE--E-EECCCCCCCEEEEEEE--------CCCCCHH-----------HHHHHHHCC--CCCEEE-
T ss_conf 0335799--7596899--8-2379998615678861--------2688888-----------988786305--884378-
Q ss_pred ECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHCC-CCCC
Q ss_conf 304434678872126873110000123420000110011110101356311014663078530567788654101-1111
Q gi|255764494|r 278 LPFISANSAGAQHLNMKLTRAQFERLVNHLIQKTVEPCKKCLQDAGLSPSDIDEVVLVGGMTRMPKIQQSVQDFF-NKSP 356 (652)
Q Consensus 278 i~~~~~~~~~g~d~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~I~~V~lvGGssriP~v~~~i~~~f-g~~~ 356 (652)
T Consensus 172 -------------F----------~~v~PV~qKmA~Iv~~hi~~~~-----v~~~yLVGGac~~~~f~~~F~k~~Pg~~v 223 (240)
T TIGR02529 172 -------------F----------SVVKPVVQKMASIVKKHIEGQK-----VKDLYLVGGACSFSGFEDVFEKELPGLNV 223 (240)
T ss_pred -------------E----------EEECCHHHHHHHHHHHHHCCCC-----CCEEEEECCCCCCHHHHHHHHHHCCCCCC
T ss_conf -------------8----------7604137778999999851188-----33689824400522467888764278762
Q ss_pred CCCCCCCCHHHHH
Q ss_conf 1135653101111
Q gi|255764494|r 357 SKGVNPDEVVAMG 369 (652)
Q Consensus 357 ~~~~npdeaVa~G 369 (652)
T Consensus 224 ~~P~~P~~vTPLG 236 (240)
T TIGR02529 224 IKPAEPLYVTPLG 236 (240)
T ss_pred CCCCCCEEECHHH
T ss_conf 1689873454133