HHsearch alignment for GI: 255764494 and conserved domain: TIGR03286
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=96.66 E-value=0.0036 Score=42.68 Aligned_cols=46 Identities=24% Similarity=0.358 Sum_probs=42.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 1466307853056778865410111111135653101111100022
Q gi|255764494|r 330 DEVVLVGGMTRMPKIQQSVQDFFNKSPSKGVNPDEVVAMGAAIQAG 375 (652)
Q Consensus 330 ~~V~lvGGssriP~v~~~i~~~fg~~~~~~~npdeaVa~GAA~~a~ 375 (652)
T Consensus 357 ~~VvftGGVA~N~GIv~ALEe~LG~~IiVPp~pQ~~GAiGAALLAs 402 (404)
T TIGR03286 357 EPVILVGGTSLIEGLVKALGDLLGIEVVVPEYSQYIGAVGAALLAS 402 (404)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHC
T ss_conf 9979989620548999999998599377189734331999999853