HHsearch alignment for GI: 255764494 and conserved domain: pfam06406
>pfam06406 StbA StbA protein. This family consists of several bacterial StbA plasmid stability proteins.
Probab=99.24 E-value=3.5e-10 Score=95.84 Aligned_cols=204 Identities=17% Similarity=0.253 Sum_probs=113.3
Q ss_pred CCCCCEEEEEECC--CCC-CCHHHHHHHHHHHCCC--------------CCCCCCCCHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf 8847336985377--887-4025788634421122--------------2222221024788886034456550799872
Q gi|255764494|r 132 GETVSKAVITVPA--YFN-DAQRQATKDAGRIAGL--------------DVLRIINEPTAAALAYGLDKKDARTVIVFDF 194 (652)
Q Consensus 132 ~~~v~~~VitVP~--~f~-~~qR~a~~~Aa~~AGl--------------~v~~li~EptAAal~Y~~~~~~~~~vlV~D~ 194 (652)
T Consensus 93 ~~~V-~lvvgLPvseyy~~d~q~n~~nI~rK~~nl~~~v~l~~~~~f~I~~v~V~pEslpA~~d~l~~~~~~~s~LIVDi 171 (318)
T pfam06406 93 PQPV-DLVVTLPLSEYYDANNQPNEENIERKKANVMRPVELNGGDSFTIRSVSVMPESLPAGFSVLKDLDSFESLLIVDL 171 (318)
T ss_pred CCEE-EEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 8705-899658469973753231488999999975060210787741577777850542567768874287673389980
Q ss_pred CCCEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 44114543101023146542013322455213447665536787642013430244789999999999885411556503
Q gi|255764494|r 195 GGGTFDVSLLEMGDGVFEVKATNGDTFLGGEDFDSCLVEHICDTFKKENGIDLKQDTLALQRLKEAAEKAKIELSSTSQT 274 (652)
Q Consensus 195 Gggt~dvsi~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~d~~~~~~a~~rL~~~~e~aK~~LS~~~~~ 274 (652)
T Consensus 172 GGtT~Dv~vv~--g~~~~~s~~~g~~~iGvs~v~~~v~~~L~~~-----~~~~s-~~-----iad--~~I~~r~d~~~l~ 236 (318)
T pfam06406 172 GGTTLDVAHVR--GQLEGISKIHGDSRIGVSLVTDAVKSALATA-----STRTS-SF-----IAD--ELIKHRHDNDYLK 236 (318)
T ss_pred CCCEEEEEEEC--CCCCCCCEEECCCCCCHHHHHHHHHHHHHHH-----CCCCC-HH-----HHH--HHHHHHHHHHHHH
T ss_conf 89468899982--6767544010479977689999999999873-----27751-24-----589--9999631255554
Q ss_pred EEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC-
Q ss_conf 5863044346788721268731100001234200001100111101013563110146630785305677886541011-
Q gi|255764494|r 275 EINLPFISANSAGAQHLNMKLTRAQFERLVNHLIQKTVEPCKKCLQDAGLSPSDIDEVVLVGGMTRMPKIQQSVQDFFN- 353 (652)
Q Consensus 275 ~i~i~~~~~~~~~g~d~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~I~~V~lvGGssriP~v~~~i~~~fg- 353 (652)
T Consensus 237 ~-----~~~d~----~-~~~~V~~~i~~~~~~L~~~v----~~~l~~----~~~~~~V~lVGGGA~l--i~~air~a~~~ 296 (318)
T pfam06406 237 Q-----RINDE----D-KRDSVMNVINEAVKKLQERV----IRALSR----FSGYTHVMVVGGGAEL--IATAIKKATGV 296 (318)
T ss_pred H-----HCCCH----H-HHHHHHHHHHHHHHHHHHHH----HHHHHC----CCCCCEEEEECCCHHH--HHHHHHHHHCC
T ss_conf 4-----21771----4-77999999999999999999----999852----2787669998787899--89999998469
Q ss_pred --CCCCCCCCCCCHHHHHHH
Q ss_conf --111113565310111110
Q gi|255764494|r 354 --KSPSKGVNPDEVVAMGAA 371 (652)
Q Consensus 354 --~~~~~~~npdeaVa~GAA 371 (652)
T Consensus 297 p~~~i~~~d~PqFAnarGm~ 316 (318)
T pfam06406 297 PDAKFIMVDNPQFALVLGMA 316 (318)
T ss_pred CCCEEEECCCHHHHHHHHHH
T ss_conf 98808956980677877775