PSIBLAST alignment of GI: 255764494 and protein with PDB id: 1dkg
>gi|2392283|pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383
Score = 353 bits (904), Expect = 7e-95, Method: Composition-based stats.
Identities = 249/378 (65%), Positives = 307/378 (81%), Gaps = 5/378 (1%)
Query: 1 MSKVIGIDLGTTNSCVAIMDGKNVRVIENAEGTRTTPSMVGFTDEGERLVGQPAKRQAVT 60
M K+IGIDLGTTNSCVAIMDG RV+ENAEG RTTPS++ +T +GE LVGQPAKRQAVT
Sbjct: 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT 60
Query: 61 NPSNTIFAAKRLIGRRFNDSTVAKDASLVPFKIVEGKGGDAWIEAQGKQYSPSQISAIVL 120
NP NT+FA KRLIGRRF D V +D S++PFKI+ GDAW+E +G++ +P QISA VL
Sbjct: 61 NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVL 120
Query: 121 QKMKETAESFLGETVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALAYG 180
+KMK+TAE +LGE V++AVITVPAYFNDAQRQATKDAGRIAGL+V RIINEPTAAALAYG
Sbjct: 121 KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180
Query: 181 LDK-KDARTVIVFDFGGGTFDVSLLEMG----DGVFEVKATNGDTFLGGEDFDSCLVEHI 235
LDK RT+ V+D GGGTFD+S++E+ + FEV ATNGDT LGGEDFDS L+ ++
Sbjct: 181 LDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 236 CDTFKKENGIDLKQDTLALQRLKEAAEKAKIELSSTSQTEINLPFISANSAGAQHLNMKL 295
+ FKK+ GIDL+ D LA+QRLKEAAEKAKIELSS QT++NLP+I+A++ G +H+N+K+
Sbjct: 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV 300
Query: 296 TRAQFERLVNHLIQKTVEPCKKCLQDAGLSPSDIDEVVLVGGMTRMPKIQQSVQDFFNKS 355
TRA+ E LV L+ +++E K LQDAGLS SDID+V+LVGG TRMP +Q+ V +FF K
Sbjct: 301 TRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE 360
Query: 356 PSKGVNPDEVVAMGAAIQ 373
P K VNPDE VA+GAA+Q
Sbjct: 361 PRKDVNPDEAVAIGAAVQ 378