PSIBLAST alignment of GI: 255764494 and protein with PDB id: 1hjo
>gi|6729803|pdb|1HJO|A Chain A, Heat-Shock 70kd Protein 42kd Atpase N-Terminal Domain Length = 380
Score = 333 bits (854), Expect = 5e-89, Method: Composition-based stats.
Identities = 200/384 (52%), Positives = 261/384 (67%), Gaps = 11/384 (2%)
Query: 2 SKVIGIDLGTTNSCVAIMDGKNVRVIENAEGTRTTPSMVGFTDEGERLVGQPAKRQAVTN 61
+ IGIDLGTT SCV + V +I N +G RTTPS V FTD ERL+G AK Q N
Sbjct: 2 AAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALN 60
Query: 62 PSNTIFAAKRLIGRRFNDSTVAKDASLVPFKIVEGKGGD---AWIEAQGKQYSPSQISAI 118
P NT+F AKRLIGR+F D V D PF+++ + + K + P +IS++
Sbjct: 61 PQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSM 120
Query: 119 VLQKMKETAESFLGETVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALA 178
VL KMKE AE++LG V+ AVITVPAYFND+QRQATKDAG IAGL+VLRIINEPTAAA+A
Sbjct: 121 VLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIA 180
Query: 179 YGLDK--KDARTVIVFDFGGGTFDVSLLEMGDGVFEVKATNGDTFLGGEDFDSCLVEHIC 236
YGLD+ K R V++FD GGGTFDVS+L + DG+FEVKAT GDT LGGEDFD+ LV H
Sbjct: 181 YGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFV 240
Query: 237 DTFKKENGIDLKQDTLALQRLKEAAEKAKIELSSTSQTEINLPFISANSAGAQHLNMKLT 296
+ FK+++ D+ Q+ A++RL+ A E+AK LSS++Q + + +T
Sbjct: 241 EEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDS----LFEGIDFYTSIT 296
Query: 297 RAQFERLVNHLIQKTVEPCKKCLQDAGLSPSDIDEVVLVGGMTRMPKIQQSVQDFFNKSP 356
RA+FE L + L + T+EP +K L+DA L + I ++VLVGG TR+PK+Q+ +QDFFN
Sbjct: 297 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRD 356
Query: 357 -SKGVNPDEVVAMGAAIQAGVLQG 379
+K +NPDE VA GAA+QA +L G
Sbjct: 357 LNKSINPDEAVAYGAAVQAAILMG 380