HHsearch alignment for GI: 255764495 and conserved domain: PRK10966
>PRK10966 exonuclease subunit SbcD; Provisional.
Probab=99.89 E-value=6.3e-21 Score=156.53 Aligned_cols=246 Identities=18% Similarity=0.197 Sum_probs=128.1
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--HHHHHH
Q ss_conf 788994111427885410002221000121000001233089999999999626997999937444489989--999999
Q gi|255764495|r 10 FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNR--EIFTST 87 (309)
Q Consensus 10 ~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~pD~vvitGDl~~~~~~~--~~~~~~ 87 (309)
T Consensus 1 MkiLHTSDWHLGk~l~g----------------~sr~~eq~~fL~~l~~~~~~e~vDavlIAGDifD~~~P~~~A~~l~~ 64 (402)
T PRK10966 1 MRILHTSDWHLGQNFYS----------------KSRAAEHQAFLDWLLEQAQEHQVDAIIVAGDIFDTGSPPSYARELYN 64 (402)
T ss_pred CCEEEHHHHHCCCCCCC----------------CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 95076103343821489----------------78299999999999999998499999988755799999999999999
Q ss_pred HHHHHHCC-CCCEEEEECCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCC---CC
Q ss_conf 99986189-97189994588422220356766-432454313444445556212799719879998328888887---55
Q gi|255764495|r 88 HWLRSIGN-PHDISIVPGNHDAYISGAKEKSL-HAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPP---FS 162 (309)
Q Consensus 88 ~~~~~l~~-~~~v~~v~GNHD~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~---~~ 162 (309)
T Consensus 65 ~fl~~l~~~~~~vvvIaGNHDS~~rL~~~~~ll~~~~~~v~~~~~~~~~~~~i~l~~~~G~~~~~~~alPyl~p~~~~~~ 144 (402)
T PRK10966 65 RFVVNLQQTGCQLVVLAGNHDSVATLNESRDLLAFLNTTVIASASDDLGHQVIILPRRDGTPGAVLCAIPFLRPRDVITS 144 (402)
T ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHCCHHHHHHCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHH
T ss_conf 99999996699689994798987776243657886786997035656666429985599877689997798998996532
Q ss_pred CCCEECHH-HH----------HHHHH---HHHHCCCCCCEEEEEEECCCCCCCCCCCCC---CCCHHHHH-HHHHHCCCE
Q ss_conf 47600899-99----------99999---985243369708999837688876431101---27978999-999874981
Q gi|255764495|r 163 ANGYFGQE-QA----------HATSK---LLRKANKKGFFRIIMMHHPPVLDTSSLYNR---MFGIQRFQ-KMIWHEGAD 224 (309)
Q Consensus 163 ~~g~~~~~-q~----------~~l~~---~L~~~~~~~~~~iv~~Hhpp~~~~~~~~~~---~~~~~~l~-~~l~~~~v~ 224 (309)
T Consensus 145 ~~g~~~~~~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~~p~i~~~Hl~~~G~~~sdSeR~i~vGg~~~v~~~~f--~~~d 222 (402)
T PRK10966 145 QAGLSGIEKQQALQQAIADHYQQLYQLACELRDALGQPLPIIATGHLTTVGASKSDSVRDIYIGTLDAFPAQAF--PPAD 222 (402)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHC--CCCC
T ss_conf 04777115899999999999999999999986311457756999730542776577624688878240568677--9878
Q ss_pred EEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 99998767532478716998689999576235778888778548999953898
Q gi|255764495|r 225 LILHGHTHLNSLHWIKNEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNE 277 (309)
Q Consensus 225 lvl~GH~H~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~y~li~i~~~~~ 277 (309)
T Consensus 223 YvALGHlH~pQ~v---~~~~~irYSGSP-l~~sFsE~~~~K~v~lVd~~~~~~ 271 (402)
T PRK10966 223 YIALGHIHRAQKV---GGTEHIRYCGSP-IPLSFDELGKSKSVHLVEFDQGKL 271 (402)
T ss_pred EEECCCCCCCCCC---CCCCCEEECCCC-CCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 7635776665606---899867976985-523533246765599999779984