HHsearch results for GI: 255764495 and protein with PDBid: 2q8u_A
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8}
Probab=99.93 E-value=6.7e-25 Score=181.21 Aligned_cols=247 Identities=14% Similarity=0.081 Sum_probs=136.4
Q ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC---HHHHH
Q ss_conf 327889941114278854100022210001210000012330899999999996269979999374444899---89999
Q gi|255764495|r 8 IMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTC---NREIF 84 (309)
Q Consensus 8 ~m~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~pD~vvitGDl~~~~~---~~~~~ 84 (309)
.| ||+|+||+|||......... ..+.......++++++.+.+++||+|+++|||++.+. .+...
T Consensus 18 ~M-kilH~SDlHLG~~~~~~~~~------------~~~~~~~~~~l~~i~~~a~~~~~D~vliaGDlf~~~~~~~~~~~~ 84 (336)
T 2q8u_A 18 EL-KILHTSDWHLGVTSWTSSRP------------VDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALH 84 (336)
T ss_dssp EE-EEEEEECCCBTCEECTTTCC------------EECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHH
T ss_pred CC-EEEEEECCCCCCCCCCCCCC------------HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHH
T ss_conf 75-89898046799877775541------------568999999999999999974999999898777799988899999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC--EEEEEECCCCCCCCC-
Q ss_conf 99999986189971899945884222203567664324543134444455562127997198--799983288888875-
Q gi|255764495|r 85 TSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNN--IALIGCSTAIATPPF- 161 (309)
Q Consensus 85 ~~~~~~~~l~~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~s~~~~~~~- 161 (309)
.+..+++.+....|+++++||||.+............... ......... .......+ +.++++.........
T Consensus 85 ~~~~~~~~l~~~~~v~~i~GNHD~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~ 159 (336)
T 2q8u_A 85 DLLDYLKRMMRTAPVVVLPGNHDWKGLKLFGNFVTSISSD----ITFVMSFEP-VDVEAKRGQKVRILPFPYPDESEALR 159 (336)
T ss_dssp HHHHHHHHHHHHSCEEECCC------CHHHHHHHHHHCSS----EEECCSSSC-EEEECTTSCEEEEEEECCC-------
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHHHHHCCCC----CEECCCCCC-EEEECCCCCEEEEECCCCCCCCCCCC
T ss_conf 9999999874289789945764641000110022210455----001145565-68870279669994366643000123
Q ss_pred CCCCEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEC
Q ss_conf 54760089999999999852433697089998376888764311012797899999987498199998767532478716
Q gi|255764495|r 162 SANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKN 241 (309)
Q Consensus 162 ~~~g~~~~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~l~~~l~~~~v~lvl~GH~H~~~~~~~~~ 241 (309)
...+.......++++..++.+..+..+.|+++|++.............+...+.+.+...+++++++||+|.++...-
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~I~~~H~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~GH~H~~~~~~~-- 237 (336)
T 2q8u_A 160 KNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQK-- 237 (336)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEEEEE--
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCEEECC--
T ss_conf 330678899999999999873264665399875421576666752237654551666313862899277757558779--
Q ss_pred CCCCEEEEEECCCCC-CCCCCCCCCCEEEEEEECCCC
Q ss_conf 998689999576235-778888778548999953898
Q gi|255764495|r 242 EKKLIPVVGIASASQ-KVHSNKPQASYNLFYIEKKNE 277 (309)
Q Consensus 242 ~~~~~~~~~~~s~~~-~~~~~~~~~~y~li~i~~~~~ 277 (309)
.+. +..+||... ++...+...||.+++++.++.
T Consensus 238 -~~~--i~y~Gs~~~~~~~E~~~~kg~~lvdi~~~~~ 271 (336)
T 2q8u_A 238 -QPL--TIYPGSLIRIDFGEEADEKGAVFVELKRGEP 271 (336)
T ss_dssp -TTE--EEECCCSSCCSGGGTTCCCEEEEEEEETTSC
T ss_pred -CCC--EEECCCCCCCCCCCCCCCCEEEEEEECCCCC
T ss_conf -998--8973896267725147998799999828981