HHSEARCH alignment of GI: 255764495 and SCOP domain: d2hy1a1

Alignment
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=1.1e-31  Score=224.36  Aligned_cols=231  Identities=16%  Similarity=0.190  Sum_probs=166.9

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC--CCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf             788994111427885410002221000121000001233089999999999626--997999937444489989999999
Q gi|255764495|r   10 FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLH--NVDHVSITGDIVNFTCNREIFTST   87 (309)
Q Consensus        10 ~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~--~pD~vvitGDl~~~~~~~~~~~~~   87 (309)
                      +||+||||+||+.....                ........+.|+++++.+++.  +||+|+++|||++.|.+++++.+.
T Consensus         5 ~~i~~iSD~Hl~~~~~~----------------~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~   68 (256)
T d2hy1a1           5 YVLLHISDTHLIGGDRR----------------LYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLR   68 (256)
T ss_dssp             EEEEEECCCCBC--------------------------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHH
T ss_pred             EEEEEEEECCCCCCCCC----------------CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf             89999962711898864----------------13674889999999999984389999999899888888715789999


Q ss_pred             HHHHHHC--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
Q ss_conf             9998618--99718999458842222035676643245431344444555621279971987999832888888755476
Q gi|255764495|r   88 HWLRSIG--NPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANG  165 (309)
Q Consensus        88 ~~~~~l~--~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~~~~~g  165 (309)
                      +++..+.  .++|+++|+||||...         .+..++....   .......+....+++.++++||.....   ..|
T Consensus        69 ~~l~~~~~~~~~p~~~v~GNHD~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~~~---~~g  133 (256)
T d2hy1a1          69 GLVEPFAAQLGAELVWVMGNHDDRA---------ELRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVPGH---HHG  133 (256)
T ss_dssp             HHHHHHHHHHTCEEEECCCTTSCHH---------HHHHHTTCCC---CCCSCCCEEEEETTEEEEECCCBCTTC---SSB
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCHH---------HHHHHHCCCC---CCCCCCCEEEEECCCCEEEEEEEECCC---CCC
T ss_conf             9864345405997899766322256---------6654210122---345654158970443202331121377---677


Q ss_pred             EECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC--CCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCC
Q ss_conf             0089999999999852433697089998376888764311--01279789999998749819999876753247871699
Q gi|255764495|r  166 YFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLY--NRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEK  243 (309)
Q Consensus       166 ~~~~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp~~~~~~~~--~~~~~~~~l~~~l~~~~v~lvl~GH~H~~~~~~~~~~~  243 (309)
                      .+.++|++||++.|++.+.  ..+|+++||||......+.  ..+.+++.+.++++++++++++|||+|.+....+.|  
T Consensus       134 ~~~~~~~~wl~~~L~~~~~--~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~~~g--  209 (256)
T d2hy1a1         134 EIRASQLGWLAEELATPAP--DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVG--  209 (256)
T ss_dssp             CCCHHHHHHHHHHHTSCCT--TCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEEETT--
T ss_pred             CCCHHHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHCEEECC--
T ss_conf             3248888999999876422--670255204885545433343232357889999745692499745356325459999--


Q ss_pred             CCEEEEEECCCCCCCC---------CCCCCCCEEEEEEECCCC
Q ss_conf             8689999576235778---------888778548999953898
Q gi|255764495|r  244 KLIPVVGIASASQKVH---------SNKPQASYNLFYIEKKNE  277 (309)
Q Consensus       244 ~~~~~~~~~s~~~~~~---------~~~~~~~y~li~i~~~~~  277 (309)
                        ++++.+||.++...         ......+|+++++.+++.
T Consensus       210 --i~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~d~~  250 (256)
T d2hy1a1         210 --IPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTV  250 (256)
T ss_dssp             --EEEEECCCCC-------------------CEEEEEECSSCE
T ss_pred             --EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE
T ss_conf             --99997498533666667888713665899889999978998


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Rv0805 cyclic nucleotide phosphodiesterase
species: Mycobacterium tuberculosis [TaxId: 1773]