BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= gi|255764495|ref|YP_003065022.2| putative phosphoesterase
protein [Candidatus Liberibacter asiaticus str. psy62]
         (309 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>gi|255764495|ref|YP_003065022.2| putative phosphoesterase protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 309

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/309 (100%), Positives = 309/309 (100%)

Query: 1   MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDI 60
           MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDI
Sbjct: 1   MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDI 60

Query: 61  LLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHA 120
           LLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHA
Sbjct: 61  LLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHA 120

Query: 121 WKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLR 180
           WKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLR
Sbjct: 121 WKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLR 180

Query: 181 KANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIK 240
           KANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIK
Sbjct: 181 KANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIK 240

Query: 241 NEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYS 300
           NEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYS
Sbjct: 241 NEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYS 300

Query: 301 DIFYDTLVL 309
           DIFYDTLVL
Sbjct: 301 DIFYDTLVL 309


>gi|254780583|ref|YP_003064996.1| glyoxalase II [Candidatus Liberibacter asiaticus str. psy62]
          Length = 256

 Score = 25.0 bits (53), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 99  ISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRN 145
           +S  P N +     +K KS+ +   Y T+ +T S  KK+ P+LRI N
Sbjct: 182 LSCDPHNLELQKYCSKVKSMRSQNLY-TNPSTISLEKKVNPFLRIEN 227


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.322    0.136    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 218,789
Number of Sequences: 1233
Number of extensions: 9440
Number of successful extensions: 26
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 3
length of query: 309
length of database: 328,796
effective HSP length: 74
effective length of query: 235
effective length of database: 237,554
effective search space: 55825190
effective search space used: 55825190
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 38 (19.2 bits)