HHsearch alignment for GI: 255764496 and conserved domain: PRK00558
>PRK00558 uvrC excinuclease ABC subunit C; Validated.
Probab=100.00 E-value=0 Score=1506.65 Aligned_cols=591 Identities=45% Similarity=0.767 Sum_probs=565.9
Q ss_pred HHHCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHCCCC-CCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 1258678862588869988889960125878887613788-778799999973444299982871999999998877618
Q gi|255764496|r 3 SEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSN-NHTHRITHMISQINNIRFTVTCTEVEALLLEANMIKRLK 81 (616)
Q Consensus 3 ~~~lP~~pGvY~~~~~~~~iiYvGKaknL~~Rv~syf~~~-~~~~k~~~l~~~~~~ie~~~t~~e~eAlilE~~lIk~~~ 81 (616)
T Consensus 11 l~~lP~~PGvY~~~d~~~~viYVGKAknLk~Rv~sYF~~~~~~~~kt~~mv~~i~~ie~ivt~sE~EALlLE~~LIK~~k 90 (609)
T PRK00558 11 LKTLPDSPGVYRMKDANGTVIYVGKAKNLKNRVSSYFRKKNDLSPKTRAMVSQIADIEYIVTRSETEALLLENNLIKKYK 90 (609)
T ss_pred HHHCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 97689998558998899989998510526678898578988899789999998624789996998999999999986758
Q ss_pred CCCEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf 72003364689772699808899845999812356784377037887899999999997301100355421247886624
Q gi|255764496|r 82 PRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYFGPFASVDAVEKTINSLQRTFFLRSCADSVFRHRTRPCLL 161 (616)
Q Consensus 82 P~yNi~LkDdk~yPyi~it~~~~~p~l~~~r~~~~~~~~yfGPf~~~~~~~~~l~~l~~~f~lR~C~~~~~~~~~~pCl~ 161 (616)
T Consensus 91 P~YNilLkDDK~YPyi~it~~e~~Pri~~~R~~~~~~~~YfGPf~~~~~~~~~l~~l~k~F~lR~C~~~~~~~r~RPCL~ 170 (609)
T PRK00558 91 PRYNILLRDDKSYPYIKITTNEKFPRLAITRGAKKDKGRYFGPYPSAGAVRETLNLLQKLFPLRTCEDSVFKNRTRPCLL 170 (609)
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
T ss_conf 98510124789983799977998730899957647897485786749999999999999835466774000347973224
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--
Q ss_conf 455425866131220356655543234550387158999999999999863338888889999999986221100024--
Q gi|255764496|r 162 FQIKRCSGPCTGEISSEKYMEFVHEAKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQNHNDSIY-- 239 (616)
Q Consensus 162 y~i~~C~gpC~~~is~~~Y~~~v~~~~~fL~G~~~~ii~~L~~~M~~aS~~l~FE~Aa~~RD~I~aL~~i~~~q~v~~-- 239 (616)
T Consensus 171 y~I~rC~aPC~g~Is~~~Y~~~V~~~~~fL~G~~~~l~~~L~~~M~~aS~~l~FE~Aa~~RD~i~aL~~i~~~Q~v~~~~ 250 (609)
T PRK00558 171 YQIGRCLAPCVGLVSKEEYAELVDEAKLFLQGKSDEVIKELEEKMEKASENLEFERAARLRDQIQALRRVQEKQKVSLAD 250 (609)
T ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
T ss_conf 43468566635757999999999999999827949999999999999997320667899999999999986356532588
Q ss_pred -CCCCHHHHCCCCCEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCHHHEECCCCC-HHHHHH
Q ss_conf -5420111000188347889984247454101135667778997898887775432137-8981231026888-578766
Q gi|255764496|r 240 -NRMDCFSLYHNKNLACIQTCFFHFGQNRGTCTFFLKTDSESTNAQILSYFLRQFYTDK-PCPENILLSEEAE-ETSLLE 316 (616)
Q Consensus 240 -~d~Dvi~i~~~~~~~~I~vl~vR~G~i~g~~~f~~~~~~~~~~~eil~~fI~qyY~~~-~iP~~Iiv~~~~~-~~~~l~ 316 (616)
T Consensus 251 ~~d~DVi~i~~~~~~~~i~v~~vR~G~i~g~~~~~~~~~~~~~~~eil~~fl~q~Y~~~~~~P~eIlv~~~~~~d~~~l~ 330 (609)
T PRK00558 251 LEDADVIAIAVDKGWACVQVFFIRGGKLLGRRSFFPKVPGDTELEEVLEAFIGQFYLDNRPIPKEILVPHELEIDKELLE 330 (609)
T ss_pred CCCCEEEEEEECCCEEEEEEEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH
T ss_conf 76540799997198589999998788996005677046677998999999999998417899976883576785689999
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE
Q ss_conf 65432013433321256552667899999999986554323343389999999875156643516999707443775404
Q gi|255764496|r 317 ISFFKQYGYKVKITVPKQGEKRKIIEQALINAHRSHTQKLSTEISHQMILKDFTKKFALPHIPKRIEIYDNSHIMGCSAV 396 (616)
Q Consensus 317 ~~L~~k~g~kV~i~~P~rG~kk~Ll~lA~~NA~~~l~~k~~~~~~~~~~l~~Lk~~L~L~~~p~rIE~fDiSh~~G~~~V 396 (616)
T Consensus 331 ~~L~~~~~~kv~i~~PkrG~Kk~Ll~lA~~NA~~~l~~~~~~~~~~~~~l~~L~~~L~L~~~p~rIE~fDiSh~~G~~~V 410 (609)
T PRK00558 331 EALSEKAGRKVKIRVPQRGDKKELLELAEKNAREALERKLSDQSTQTAALEELAEALGLPTLPKRIECFDISHIQGTDTV 410 (609)
T ss_pred HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEE
T ss_conf 99985359946996188536899999999999999999987555699999999998388998878999824321687605
Q ss_pred EEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH
Q ss_conf 88888516872803232110244445541168998999999997753131112333333334545798489980985899
Q gi|255764496|r 397 GCMVVVGENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGGKGQL 476 (616)
Q Consensus 397 as~Vvf~~g~~~K~~YR~f~Ik~~~v~~~DD~~~m~Evi~RR~~r~~~~~~~l~~~~~~~~~~~~~~PDLilIDGGkgQl 476 (616)
T Consensus 411 gsmVvf~~g~~~K~~YRkf~Ik--~~~~~DDy~~M~Evl~RR~~r~~~e~--------------~~lPDLilIDGGkgQL 474 (609)
T PRK00558 411 ASMVVFEDGGPDKSEYRRYNIK--GITGGDDYAAMREVLTRRFSRLLKEF--------------AKLPDLILIDGGKGQL 474 (609)
T ss_pred EEEEEEECCCCCHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCC--------------CCCCCEEEECCCHHHH
T ss_conf 8999997897276764711369--99998659999999999998887538--------------9999889954977899
Q ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEE-CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC
Q ss_conf 99999999758877871899971877676634898-17983488579989999999887877887889899864321-47
Q gi|255764496|r 477 SAAQGVLKKLNVENRITIISIAKGPKRSAGMEKFF-VKKGEALVLNMRDPILYFIQRLRDEAHRFAITTHRKRRKKA-AY 554 (616)
Q Consensus 477 n~a~~vl~~l~i~~~i~viglaK~~~r~~~~e~~~-~~~~~~i~l~~~~~~l~~Lq~iRDEaHRFAi~~hRk~r~k~-~~ 554 (616)
T Consensus 475 ~~a~~~l~~l~l~-~i~viglaK~~~r~~~~E~i~~~~~~~~i~l~~~s~~l~lLq~iRDEaHRFAi~~hR~~R~k~~~~ 553 (609)
T PRK00558 475 NAAKEVLEELGLD-DIPVIGLAKGDERKAGTEELFFPDGGEPFSLPPNSPALYLLQRIRDEAHRFAITFHRQKRSKARLT 553 (609)
T ss_pred HHHHHHHHHCCCC-CCCEEEEECCCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999976999-860899971687777740899789982554499998999999998729887999999975020025
Q ss_pred CCHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCC
Q ss_conf 71004888798999999998088898993898888627899989999999985478
Q gi|255764496|r 555 SPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHFHKN 610 (616)
Q Consensus 555 S~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~~~ 610 (616)
T Consensus 554 s~Ld~I~GIG~kr~~~Ll~~Fgs~~~i~~As~eeL~~v~Gi~~~~A~~I~~~l~~~ 609 (609)
T PRK00558 554 SRLDDIPGIGPKRRKALLKHFGSLKAIKEASVEELAKVPGISKKLAEKIYEALHKK 609 (609)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCC
T ss_conf 71647899799999999997079999973899999648998999999999997059