HHsearch alignment for GI: 255764496 and conserved domain: PRK05797
>PRK05797 consensus.
Probab=96.93 E-value=0.0019 Score=44.36 Aligned_cols=137 Identities=21% Similarity=0.250 Sum_probs=74.2
Q ss_pred CCCCEEEEECCHH-----HHHHHHHHH--HHCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEE--EECCCCHHHHHHHH
Q ss_conf 7984899809858-----999999999--97588778718999718776766348981798348--85799899999998
Q gi|255764496|r 462 SWPDVVILDGGKG-----QLSAAQGVL--KKLNVENRITIISIAKGPKRSAGMEKFFVKKGEAL--VLNMRDPILYFIQR 532 (616)
Q Consensus 462 ~~PDLilIDGGkg-----Qln~a~~vl--~~l~i~~~i~viglaK~~~r~~~~e~~~~~~~~~i--~l~~~~~~l~~Lq~ 532 (616)
T Consensus 584 ~L~~~i~~~-gRiHt~f~Q~~t~TGRLSS~~PNLQN-IP~r~-e~G~~--iR-~aFi~~~~~~~l~saDYSQIELRilAh 657 (869)
T PRK05797 584 GLKNVIDED-GRIHSNFNQTVTTTGRLSSTEPNLQN-IPIKY-EMGRE--IR-KVFIPNTEDSVILSADYSQIELRVLAH 657 (869)
T ss_pred HHHHHCCCC-CCCCCHHHHHHCCCCCCCCCCCCCCC-CCCCC-CCHHH--HH-HEEECCCCCCEEEECCHHHHHHHHHHH
T ss_conf 899742624-65054266543440211468986456-87765-20122--55-357147776158852277899999999
Q ss_pred H-HHHHHHHHH----HHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 8-787788788----98998643214771004888798999999998088898993898888627899989999999985
Q gi|255764496|r 533 L-RDEAHRFAI----TTHRKRRKKAAYSPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHF 607 (616)
Q Consensus 533 i-RDEaHRFAi----~~hRk~r~k~~~S~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~l 607 (616)
T Consensus 658 ~s~d~~l~~af~~~~DiH~~tA~~vf~~~~~~v~--~~~R~~AK~infGiiYG---~~~~gLs~~l~i~~~eA~~~i~~y 732 (869)
T PRK05797 658 ISGDENLIDAFNHHEDIHTKTASEVFKVPIEEVT--PLMRSNAKAVNFGIVYG---IGDFSLSQDLNISRKEAKEYIDNY 732 (869)
T ss_pred HHCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHCC--HHHHHHHHHHHHHHHHC---CCHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 8468999998855997689999999598911179--88999988988566555---686778985298999999999999
Q ss_pred CC
Q ss_conf 47
Q gi|255764496|r 608 HK 609 (616)
Q Consensus 608 ~~ 609 (616)
T Consensus 733 f~ 734 (869)
T PRK05797 733 FE 734 (869)
T ss_pred HH
T ss_conf 99