HHsearch alignment for GI: 255764496 and conserved domain: PRK09482
>PRK09482 xni exonuclease IX; Provisional.
Probab=96.93 E-value=0.0014 Score=45.28 Aligned_cols=62 Identities=23% Similarity=0.334 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHCC---C-CHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 88788989986432147---7-100488879899999999808889899389888862789998999999998
Q gi|255764496|r 538 HRFAITTHRKRRKKAAY---S-PLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNH 606 (616)
Q Consensus 538 HRFAi~~hRk~r~k~~~---S-~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~ 606 (616)
T Consensus 161 ek~Gv~P~q~~d~~aL~GD~SDNIPGV~GIG~KtA~~LL~~fgsle~i~~n~-d~------i~~k~~~~l~~~ 226 (256)
T PRK09482 161 QEFGVEPQQLPDYWGLAGISSSKIPGVAGIGPKSAAELLNQFRSLEGIYESL-DA------LPEKWRKKLEEH 226 (256)
T ss_pred HHCCCCHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH-HH------CCHHHHHHHHHC
T ss_conf 8528287353230247465436899999858889999999855099999837-75------568999999968