HHsearch alignment for GI: 255764496 and conserved domain: PRK10430

>PRK10430 DNA-binding transcriptional activator DcuR; Provisional.
Probab=94.26  E-value=0.25  Score=29.15  Aligned_cols=175  Identities=17%  Similarity=0.130  Sum_probs=89.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCC--CCCC--CCCCCCCCCCCCCCEEEEECCHHHH---HHHHHHHHHCCCCCCCCEEEE
Q ss_conf             11689989999999977531311--1233--3333334545798489980985899---999999997588778718999
Q gi|255764496|r  425 QDDCAMMRMVLERRFSQLIKNEE--NLNF--HPKKQEYSFPSWPDVVILDGGKGQL---SAAQGVLKKLNVENRITIISI  497 (616)
Q Consensus       425 ~DD~~~m~Evi~RR~~r~~~~~~--~l~~--~~~~~~~~~~~~PDLilIDGGkgQl---n~a~~vl~~l~i~~~i~vigl  497 (616)
T Consensus         7 VEDD~~v~~~~~~~l~~~~gf~vv~~a~t~~eA~~~l~~~~~~~DLILLDi~mPd~~Glell~-~lR~~~~~--~~VI~I   83 (239)
T PRK10430          7 VDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQQENGLDLLP-VLHEAGCK--SDVIVI   83 (239)
T ss_pred             EECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHH-HHHHHCCC--CEEEEE
T ss_conf             929899999999998518990899998999999999965799985899789999997899999-99985899--819999


Q ss_pred             ECCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCCHHC---------------C
Q ss_conf             7187767663489817983488579989999999887877887889899864321-4-771004---------------8
Q gi|255764496|r  498 AKGPKRSAGMEKFFVKKGEALVLNMRDPILYFIQRLRDEAHRFAITTHRKRRKKA-A-YSPLDE---------------I  560 (616)
Q Consensus       498 aK~~~r~~~~e~~~~~~~~~i~l~~~~~~l~~Lq~iRDEaHRFAi~~hRk~r~k~-~-~S~Ld~---------------I  560 (616)
T Consensus        84 Ta~~d~~~v~~Al~~Ga~D-YLiKPf~-----~~rl~~~L~~y~~-~~~~l~~~~~~~Q~~iD~l~~~~~~~~~~~~~lP  156 (239)
T PRK10430         84 SSAADAATIKDSLHYGVVD-YLIKPFQ-----ASRFEEALTGWRQ-KKMALEKRQYYDQAELDQLIHGSSSNEQDPRRLP  156 (239)
T ss_pred             EECCCHHHHHHHHHCCCHH-HEECCCC-----HHHHHHHHHHHHH-HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             7268899999999839503-0489999-----9999999999999-9998545787899999999850578888766699


Q ss_pred             CCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCC
Q ss_conf             88798999999998088898993898888627899989999999985478
Q gi|255764496|r  561 NGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHFHKN  610 (616)
Q Consensus       561 ~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~~~  610 (616)
T Consensus       157 KGl~~~TL~~i~~~l~~~~~-~~~sa~eva~~~giSRvTaRRYLe~L~~~  205 (239)
T PRK10430        157 KGLTPQTLRTLCQWIDAHQD-YEFSTDELANEVNISRVSCRKYLIWLVNC  205 (239)
T ss_pred             CCCCHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf             99999999999999982799-98469999988585298899999999868