HHsearch alignment for GI: 255764496 and conserved domain: PRK11617

>PRK11617 endonuclease V; Provisional.
Probab=96.58  E-value=0.0061  Score=40.76  Aligned_cols=109  Identities=18%  Similarity=0.167  Sum_probs=63.6

Q ss_pred             HHHCCCCCCCEEEEEECCCCCC-CCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH--HHHHHHHHCCCC
Q ss_conf             7515664351699970744377-5404888885168728032321102444455411689989999--999977531311
Q gi|255764496|r  371 KKFALPHIPKRIEIYDNSHIMG-CSAVGCMVVVGENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVL--ERRFSQLIKNEE  447 (616)
Q Consensus       371 ~~L~L~~~p~rIE~fDiSh~~G-~~~Vas~Vvf~~g~~~K~~YR~f~Ik~~~v~~~DD~~~m~Evi--~RR~~r~~~~~~  447 (616)
T Consensus        21 d~~~~~-~~~~VaGvDvSf~~~~~~~~Aa~Vvl~~p~l~vv-~~~~~~~~~~fPYIPG~LaFRE~p~ll~a~~~L-----   93 (223)
T PRK11617         21 DRLDKD-PPDLIAGADVGFEQGGEVTRAAMVLLKYPSLELV-EYQVARIATTMPYIPGFLSFREYPALLAAWEQL-----   93 (223)
T ss_pred             CCCCCC-CCCEEEEEEEEEECCCCEEEEEEEEEECCCCEEE-EEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHC-----
T ss_conf             789988-7638999988685699779999999988993699-999999743688566146560349999999962-----


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEC-CHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             123333333345457984899809-85899999999997588778718999718
Q gi|255764496|r  448 NLNFHPKKQEYSFPSWPDVVILDG-GKGQLSAAQGVLKKLNVENRITIISIAKG  500 (616)
Q Consensus       448 ~l~~~~~~~~~~~~~~PDLilIDG-GkgQln~a~~vl~~l~i~~~i~viglaK~  500 (616)
T Consensus        94 -------------~~~PDvllvDG~Gi~HPRr~-GlAsHlGV~l~~PTIGVAK~  133 (223)
T PRK11617         94 -------------SQKPDLVFVDGHGISHPRRL-GVASHFGLLVDVPTIGVAKK  133 (223)
T ss_pred             -------------CCCCCEEEECCCCCCCCCCC-CHHHEEEEECCCCCCCCCCC
T ss_conf             -------------77999999879754376241-61202455428783230053