HHsearch alignment for GI: 255764496 and conserved domain: TIGR00194

>TIGR00194 uvrC excinuclease ABC, C subunit; InterPro: IPR004791 Excinuclease ABC complex is involved in DNA replication, recombination and repair. This group defines the C subunit.; GO: 0009381 excinuclease ABC activity, 0006281 DNA repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.
Probab=100.00  E-value=0  Score=758.75  Aligned_cols=573  Identities=39%  Similarity=0.656  Sum_probs=525.2

Q ss_pred             CHHHCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHCCCCC--CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             912586788625888699888899601258788876137887--787999999734442999828719999999988776
Q gi|255764496|r    2 SSEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNN--HTHRITHMISQINNIRFTVTCTEVEALLLEANMIKR   79 (616)
Q Consensus         2 ~~~~lP~~pGvY~~~~~~~~iiYvGKaknL~~Rv~syf~~~~--~~~k~~~l~~~~~~ie~~~t~~e~eAlilE~~lIk~   79 (616)
T Consensus         4 ~~~~~p~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~   83 (601)
T TIGR00194         4 KLKKLPDEPGCYLWKDRNGKVLYVGKAKNLKKRVKSYFRENNPRASAKTELLVKQIADIEYILTSNENEALLLEANLIKQ   83 (601)
T ss_pred             CHHHCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH
T ss_conf             20216677761566327871688402367888888865103454137899999877542100213503567777667753


Q ss_pred             HCCCCEECCCCCCCCCEEEEECCCCCCEEEEEE--CCCCCCCEEEECCC-CHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             187200336468977269980889984599981--23567843770378-878999999999973011003554212478
Q gi|255764496|r   80 LKPRFNILLRDDKSFPYILITDKHKIPALYKHR--DSSTIQGSYFGPFA-SVDAVEKTINSLQRTFFLRSCADSVFRHRT  156 (616)
Q Consensus        80 ~~P~yNi~LkDdk~yPyi~it~~~~~p~l~~~r--~~~~~~~~yfGPf~-~~~~~~~~l~~l~~~f~lR~C~~~~~~~~~  156 (616)
T Consensus        84 ~~p~~~~~l~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~  163 (601)
T TIGR00194        84 YKPRYNVLLKDDKGYPYIYLTHSEKYPRLLLTRKKGLKKDKGKYFGPFPSNAFALRETLDLLLKLFPLRKCAKPVYHNRD  163 (601)
T ss_pred             CCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             07753236633776305886255432301111222201233320255544156789999999875545531001221257


Q ss_pred             CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86624455425866131220356655543234550387158999999999999863338888889999999986221100
Q gi|255764496|r  157 RPCLLFQIKRCSGPCTGEISSEKYMEFVHEAKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQNHND  236 (616)
Q Consensus       157 ~pCl~y~i~~C~gpC~~~is~~~Y~~~v~~~~~fL~G~~~~ii~~L~~~M~~aS~~l~FE~Aa~~RD~I~aL~~i~~~q~  236 (616)
T Consensus       164 ~pc~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (601)
T TIGR00194       164 RPCLYYQLGRCLGPCVGGITEEEYRELLEKVELFLNGGPDEVLKELEEKLEKASENLEFEEAARLRDQIKALLELNEKQK  243 (601)
T ss_pred             CCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             74110123334433431010467899999999986276568999999888876642127789999999999988766665


Q ss_pred             CCC----CCCCHHHHCCCCCEEEEEEEEEECCEEEECC-CCCCCCCCCCCHHHHHHHHHHHHHCC----CCCCHHHEECC
Q ss_conf             024----5420111000188347889984247454101-13566777899789888777543213----78981231026
Q gi|255764496|r  237 SIY----NRMDCFSLYHNKNLACIQTCFFHFGQNRGTC-TFFLKTDSESTNAQILSYFLRQFYTD----KPCPENILLSE  307 (616)
Q Consensus       237 v~~----~d~Dvi~i~~~~~~~~I~vl~vR~G~i~g~~-~f~~~~~~~~~~~eil~~fI~qyY~~----~~iP~~Iiv~~  307 (616)
T Consensus       244 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  323 (601)
T TIGR00194       244 VSLTKDLLDLDIIGYAFDGGVAAVVVLFIRDGKLLGKDGSFDFSLPGGTDLDELLETFLGQFYLSGYENRLLPSEILLPL  323 (601)
T ss_pred             HHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
T ss_conf             54322100211124421676123454320045100000111101135551578999999987741000113640103112


Q ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             888578766654320134333212565526678999999999865543233433---89999999875156643516999
Q gi|255764496|r  308 EAEETSLLEISFFKQYGYKVKITVPKQGEKRKIIEQALINAHRSHTQKLSTEIS---HQMILKDFTKKFALPHIPKRIEI  384 (616)
Q Consensus       308 ~~~~~~~l~~~L~~k~g~kV~i~~P~rG~kk~Ll~lA~~NA~~~l~~k~~~~~~---~~~~l~~Lk~~L~L~~~p~rIE~  384 (616)
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  403 (601)
T TIGR00194       324 SLEDLKLLEDLLSELRGRKVNVHLPKKGDKKKLLELAIKNAKLALKEKWSQFERNLDKTEALEDLAELLNLPELPKRLEG  403 (601)
T ss_pred             CHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
T ss_conf             10016789999875304401220265413789999988667888877653221035788899999997423333201000


Q ss_pred             EECCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCC--HHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCC
Q ss_conf             70744377540488888516872803232110244445541--1689989999999977531-31112333333334545
Q gi|255764496|r  385 YDNSHIMGCSAVGCMVVVGENGFVKNQYRKFNLHPNDVKTQ--DDCAMMRMVLERRFSQLIK-NEENLNFHPKKQEYSFP  461 (616)
Q Consensus       385 fDiSh~~G~~~Vas~Vvf~~g~~~K~~YR~f~Ik~~~v~~~--DD~~~m~Evi~RR~~r~~~-~~~~l~~~~~~~~~~~~  461 (616)
T Consensus       404 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~~~~~~~~~~~~~~~~g~~-------------~~  470 (601)
T TIGR00194       404 FDISHLDGSNTVGSLVVFEDGKPLKASYRRYNLKNPSLTGGESDDYAALREVLRRRYSSILKGEN-------------NL  470 (601)
T ss_pred             EEHHHCCCCCCHHEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-------------CC
T ss_conf             00000133210100123304530123322101367555676531578899999987655431423-------------47


Q ss_pred             CCCCEEEEECCHHHHHHHHHHHHHCCC--CCCCCEEEEECCCCCCCCCEEEECCCCCEEEE--CCCCHHHHHHHHHHHHH
Q ss_conf             798489980985899999999997588--77871899971877676634898179834885--79989999999887877
Q gi|255764496|r  462 SWPDVVILDGGKGQLSAAQGVLKKLNV--ENRITIISIAKGPKRSAGMEKFFVKKGEALVL--NMRDPILYFIQRLRDEA  537 (616)
Q Consensus       462 ~~PDLilIDGGkgQln~a~~vl~~l~i--~~~i~viglaK~~~r~~~~e~~~~~~~~~i~l--~~~~~~l~~Lq~iRDEa  537 (616)
T Consensus       471 p~~~~~~~dgg~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  549 (601)
T TIGR00194       471 PLPDLLLIDGGKGQLNAALEVLKSLGVWDLNKPPVIGLAKGAKRHEG-DILLLGDPEPVNLDLPPNSPALHLLQHLRDEA  549 (601)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC-CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             86643786176035789999986224444322102210012210024-30210255554433466641578888776665


Q ss_pred             HHHHHHHHHHHHHHH-CCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHH
Q ss_conf             887889899864321-477100488879899999999808889899389888
Q gi|255764496|r  538 HRFAITTHRKRRKKA-AYSPLDEINGIGPLRKRLLLQSFGTVKMISRSSPET  588 (616)
Q Consensus       538 HRFAi~~hRk~r~k~-~~S~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~ee  588 (616)
T Consensus       550 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~  601 (601)
T TIGR00194       550 HRFAIGFHRKKRLKASLQSPLDKIPGVGEKRKKKLLKHFGSLDGIKEASVEE  601 (601)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             5565443455555555554433203554678999998741132333320249