HHsearch alignment for GI: 255764496 and conserved domain: TIGR00575
>TIGR00575 dnlj DNA ligase, NAD-dependent; InterPro: IPR001679 DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalyzing the formation of an internucleotide ester bond between phosphate and deoxyribose. It is active during DNA replication, DNA repair and DNA recombination. There are two forms of DNA ligase: one requires ATP (6.5.1.1 from EC), the other NAD (6.5.1.2 from EC). This family is predominantly composed of NAD-dependent bacterial DNA ligases. They are proteins of about 75 to 85 Kd whose sequence is well conserved , . They also show similarity to yicF, an Escherichia coli hypothetical protein of 63 Kd.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair.
Probab=98.57 E-value=8.1e-08 Score=75.93 Aligned_cols=56 Identities=34% Similarity=0.529 Sum_probs=53.2
Q ss_pred HCCCCCCHHHHHHHHHHHCCHHHHHHCCHH-----------HHHHCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 048887989999999980888989938988-----------88627899989999999985478678
Q gi|255764496|r 558 DEINGIGPLRKRLLLQSFGTVKMISRSSPE-----------TLASIEGISKKIACKIYNHFHKNTSH 613 (616)
Q Consensus 558 d~I~GIG~k~~~~Ll~~Fgs~~~i~~As~e-----------eL~~v~gi~~~~A~~I~~~l~~~~~~ 613 (616)
T Consensus 524 LGIr~VG~~~A~~La~~f~tl~~L~~A~~e~~~~~~~f~~s~L~~~~g~G~~vA~~~~~~F~~~~~~ 590 (706)
T TIGR00575 524 LGIRHVGEVTAKLLAKHFGTLDKLKAASLETLESIYQFDRSELLSVEGVGPKVAESIVNFFHDPNNL 590 (706)
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 2860357999999998558868998508216778875160556410140278999999987120001