HHsearch results for GI: 255764496 and protein with PDBid: 1cuk_A

>1cuk_A RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli} SCOP: a.5.1.1 a.60.2.1 b.40.4.2 PDB: 1hjp_A 1bdx_A* 1c7y_A 1d8l_A

Probab=97.53  E-value=0.00012  Score=51.57  Aligned_cols=60  Identities=23%  Similarity=0.412  Sum_probs=50.6

Q ss_pred             HHHCCCCHHCCCCCCHHHHHHHHHHHC---CHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCC
Q ss_conf             321477100488879899999999808---889899389888862789998999999998547
Q gi|255764496|r  550 KKAAYSPLDEINGIGPLRKRLLLQSFG---TVKMISRSSPETLASIEGISKKIACKIYNHFHK  609 (616)
Q Consensus       550 ~k~~~S~Ld~I~GIG~k~~~~Ll~~Fg---s~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~~  609 (616)
                      .+.++..|-.|+|||||..-.+|..+.   =+..|.+-...-|.++||||+++|++|.-.|+.
T Consensus        68 Er~lF~~Li~VsGIGPK~AL~ILs~~~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIilELkd  130 (203)
T 1cuk_A           68 ERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKD  130 (203)
T ss_dssp             HHHHHHHHHHSSSCCHHHHHHHHHHSCHHHHHHHHHTTCHHHHHTSTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf             999999985768857566888861279899999987189988606998779999999999999