HHsearch results for GI: 255764496 and protein with PDBid: 1dgs_A
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=94.60 E-value=0.015 Score=36.38 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=49.5
Q ss_pred CHHCCCCCCHHHHHHHHHH--HCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCC
Q ss_conf 1004888798999999998--0888989938988886278999899999999854786
Q gi|255764496|r 556 PLDEINGIGPLRKRLLLQS--FGTVKMISRSSPETLASIEGISKKIACKIYNHFHKNT 611 (616)
Q Consensus 556 ~Ld~I~GIG~k~~~~Ll~~--Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~~~~ 611 (616)
.-.+|.|+|+++.++|+.. ..++..|...+.++|.+++|++++.|++|++.+.+..
T Consensus 442 ~~l~I~GlG~~~i~~L~e~g~I~~i~Diy~L~~~~l~~l~gfg~ksa~nll~sIe~sk 499 (667)
T 1dgs_A 442 KAMDIEGLGEKLIERLLEKGLVRDVADLYHLRKEDLLGLERMGEKSAQNLLRQIEESK 499 (667)
T ss_dssp TSSCCTTCCHHHHHHHHHTTSCSSGGGGGGGCCHHHHTTSSCCSTTHHHHHHHHHHGG
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHC
T ss_conf 4427576089999999867872767884137887763577634023789999987641