HHsearch results for GI: 255764496 and protein with PDBid: 1t94_A
>1t94_A Polymerase (DNA directed) kappa; replication, DNA repair, Y-family DNA polymerase, translesion DNA synthesis, lesion bypass; 2.40A {Homo sapiens} SCOP: d.240.1.1 e.8.1.7 PDB: 2oh2_A* 2w7o_A* 2w7p_A* 3hed_A* 3in5_A*
Probab=90.82 E-value=0.67 Score=24.46 Aligned_cols=108 Identities=17% Similarity=0.199 Sum_probs=63.0
Q ss_pred HHHHHHHHHCCCCCCCCEEEEECCCC-CCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999758877871899971877-67663489817983488579989999999887877887889899864321477
Q gi|255764496|r 477 SAAQGVLKKLNVENRITIISIAKGPK-RSAGMEKFFVKKGEALVLNMRDPILYFIQRLRDEAHRFAITTHRKRRKKAAYS 555 (616)
Q Consensus 477 n~a~~vl~~l~i~~~i~viglaK~~~-r~~~~e~~~~~~~~~i~l~~~~~~l~~Lq~iRDEaHRFAi~~hRk~r~k~~~S 555 (616)
..-..+.+++|+. .-+|||.+.- -|-+.+ +-.++|..+.++....+..|| ..-
T Consensus 229 ~ir~~I~~~~gl~---~SiGIa~nk~lAKlAs~-~~KP~G~~~~~~~~~~~~~~L----------------------~~l 282 (459)
T 1t94_A 229 EIRFRIEQKTTLT---ASAGIAPNTMLAKVCSD-KNKPNGQYQILPNRQAVMDFI----------------------KDL 282 (459)
T ss_dssp HHHHHHHHHHSCC---EEEEEESSHHHHHHHHH-HTTTTCEEECCSSHHHHHHHH----------------------TTC
T ss_pred HHHHHHHHHHCCC---EEEEECCCHHHHHHHHH-HCCCCCCEEEECCHHHHHHHH----------------------HHC
T ss_conf 9999999986996---25442476888898897-369987089914689999998----------------------629
Q ss_pred CHHCCCCCCHHHHHHHHHHHC--CHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 100488879899999999808--88989938988886278999899999999854786789
Q gi|255764496|r 556 PLDEINGIGPLRKRLLLQSFG--TVKMISRSSPETLASIEGISKKIACKIYNHFHKNTSHT 614 (616)
Q Consensus 556 ~Ld~I~GIG~k~~~~Ll~~Fg--s~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~~~~~~~ 614 (616)
++.+|+|||+++.++| ..+| ++..+.+.. +.|..+. ++..++.+++..+..+.++
T Consensus 283 pv~~l~GIG~~~~~~L-~~~gI~ti~dL~~~~-~~l~~~~--g~~~~~~~~~~~~Gid~~~ 339 (459)
T 1t94_A 283 PIRKVSGIGKVTEKML-KALGIITCTELYQQR-ALLSLLF--SETSWHYFLHISLGLGSTH 339 (459)
T ss_dssp BGGGCTTSCHHHHHHH-HHTTCCBHHHHHHTH-HHHHHHS--CHHHHHHHHHHHTTCCCSC
T ss_pred CCCEECCCCCHHHHHH-HHHCCCCHHHHHHHH-HHHHHHH--CCHHHHHHHHHHCCCCCCC
T ss_conf 8353368884137889-870784999999858-8899984--5136664687762867633