HHsearch results for GI: 255764496 and protein with PDBid: 1yd6_A
>1yd6_A UVRC; DNA binding protein; 2.00A {Bacillus caldotenax}
Probab=99.96 E-value=6.1e-29 Score=226.69 Aligned_cols=91 Identities=41% Similarity=0.800 Sum_probs=86.9
Q ss_pred HHHCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCC
Q ss_conf 12586788625888699888899601258788876137887787999999734442999828719999999988776187
Q gi|255764496|r 3 SEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTEVEALLLEANMIKRLKP 82 (616)
Q Consensus 3 ~~~lP~~pGvY~~~~~~~~iiYvGKaknL~~Rv~syf~~~~~~~k~~~l~~~~~~ie~~~t~~e~eAlilE~~lIk~~~P 82 (616)
.++||++||||+|+|++|+|||||||+|||+||+|||++. .+.++.+|+.++.+|+|++|.||.+|++||+.||++|+|
T Consensus 9 l~~lP~~pGVY~f~d~~g~vlYVGKaknLr~Rv~shf~~~-~~~~~~~l~~~~~~i~~~~t~~e~~A~llE~~lIk~~~P 87 (99)
T 1yd6_A 9 LAVLPEQPGCYLMKDKHGTVIYVGKAKSLKERVRSYFTGT-HDGKTQRLVEEIADFEYIVTSSNAEALILEMNLIKKHDP 87 (99)
T ss_dssp HHTCCSSCEEEEEECSSCCEEEEEEESCHHHHHHGGGSSC-CCHHHHHHHHHCSEEEEEECSSHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHC-CHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 9868999868999899998999767375889999996213-227899999873372089849788889999999998299
Q ss_pred CCEECCCCCCCC
Q ss_conf 200336468977
Q gi|255764496|r 83 RFNILLRDDKSF 94 (616)
Q Consensus 83 ~yNi~LkDdk~y 94 (616)
+||++|||||+|
T Consensus 88 ~yN~~~k~~k~y 99 (99)
T 1yd6_A 88 KYNVMLKDDKSY 99 (99)
T ss_dssp HHHHHTCC----
T ss_pred CCHHCCCCCCCC
T ss_conf 740102589999