HHsearch results for GI: 255764496 and protein with PDBid: 2a1j_A

>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=99.28  E-value=3.6e-12  Score=105.74  Aligned_cols=60  Identities=20%  Similarity=0.298  Sum_probs=56.5

Q ss_pred             CCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             4771004888798999999998088898993898888627899989999999985478678
Q gi|255764496|r  553 AYSPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHFHKNTSH  613 (616)
Q Consensus       553 ~~S~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~~~~~~  613 (616)
                      ..+.|++|||||+++.+.|++||||+++|.+||.+||.+|+| |++.|+.||++||...++
T Consensus         2 ~~d~L~~IPGIg~~~~~~Ll~~fgSi~~l~~as~eeL~~v~G-~~~~A~~i~~~l~~~~~~   61 (63)
T 2a1j_A            2 PQDFLLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILG-NAANAKQLYDFIHTSFAE   61 (63)
T ss_dssp             CCHHHHTSTTCCHHHHHHHHHHCSSHHHHHTCCHHHHHHHHS-CHHHHHHHHHHHHCCCCC
T ss_pred             CHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHCCC-CHHHHHHHHHHHCCCCCC
T ss_conf             588885299988999999999867999998799999987869-899999999998021001