HHsearch results for GI: 255764496 and protein with PDBid: 2a1j_A
>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=99.28 E-value=3.6e-12 Score=105.74 Aligned_cols=60 Identities=20% Similarity=0.298 Sum_probs=56.5
Q ss_pred CCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 4771004888798999999998088898993898888627899989999999985478678
Q gi|255764496|r 553 AYSPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHFHKNTSH 613 (616)
Q Consensus 553 ~~S~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~~~~~~ 613 (616)
..+.|++|||||+++.+.|++||||+++|.+||.+||.+|+| |++.|+.||++||...++
T Consensus 2 ~~d~L~~IPGIg~~~~~~Ll~~fgSi~~l~~as~eeL~~v~G-~~~~A~~i~~~l~~~~~~ 61 (63)
T 2a1j_A 2 PQDFLLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILG-NAANAKQLYDFIHTSFAE 61 (63)
T ss_dssp CCHHHHTSTTCCHHHHHHHHHHCSSHHHHHTCCHHHHHHHHS-CHHHHHHHHHHHHCCCCC
T ss_pred CHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHCCC-CHHHHHHHHHHHCCCCCC
T ss_conf 588885299988999999999867999998799999987869-899999999998021001