HHsearch results for GI: 255764496 and protein with PDBid: 3ga2_A
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=96.85 E-value=0.00093 Score=45.07 Aligned_cols=114 Identities=17% Similarity=0.105 Sum_probs=59.4
Q ss_pred HHHHHHHCCCC-----CCCEEEEEECCCCCCC---CCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99987515664-----3516999707443775---404888885168728032321102444455411689989999999
Q gi|255764496|r 367 KDFTKKFALPH-----IPKRIEIYDNSHIMGC---SAVGCMVVVGENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVLERR 438 (616)
Q Consensus 367 ~~Lk~~L~L~~-----~p~rIE~fDiSh~~G~---~~Vas~Vvf~~g~~~K~~YR~f~Ik~~~v~~~DD~~~m~Evi~RR 438 (616)
.+|++.+.+.. ..+.|-|+|+|....+ .++|+.||+.-... +--|+.+-+..-+.-..--|-|.||+--
T Consensus 22 ~~L~~~v~~~~~~~~~~v~~VaGvDvsy~~~~~~~~~~a~~Vvl~~~~~-~~v~~~~~~~~~~~PYIPG~LaFRE~p~-- 98 (246)
T 3ga2_A 22 FNLKNRINLSPTIHPDSINTTAGVDLAYWEQDGEPYGVCCIIVIDADTK-EVIEKVHSMGRISVPYVSGFLAFRELPL-- 98 (246)
T ss_dssp HHHHTTCCCCCCCCGGGCSEEEEEEEEEEEETTEEEEEEEEEEEETTTC-CEEEEEEEEEECCCCSSSSCGGGGTHHH--
T ss_pred HHHHHHEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCC-CEEEEEEEEEECCCCCCCCHHHHHHHHH--
T ss_conf 9998514746788987676899998666548886489999999977987-1899999996236883652365621799--
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC-HHHH---HHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 9775313111233333333454579848998098-5899---9999999975887787189997187
Q gi|255764496|r 439 FSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGG-KGQL---SAAQGVLKKLNVENRITIISIAKGP 501 (616)
Q Consensus 439 ~~r~~~~~~~l~~~~~~~~~~~~~~PDLilIDGG-kgQl---n~a~~vl~~l~i~~~i~viglaK~~ 501 (616)
+..+.+. | ...||||+|||- .-|= ..|-. +|+..++|.||+||..
T Consensus 99 ll~al~~---L-----------~~~PDvllvDG~Gi~HPR~~GlA~H----lGv~l~~PtIGVAK~~ 147 (246)
T 3ga2_A 99 IIEAAKK---L-----------ETEPDVFLFDGNGYLHYNHMGVATH----AAFFLGKPTIGIAKTY 147 (246)
T ss_dssp HHHHHHH---C-----------SSCCSCEEEEBCSSSSTTSCCHHHH----HHHHHTSCEEEEESSC
T ss_pred HHHHHHH---C-----------CCCCCEEEECCCCCCCCCCCCHHHH----EEEECCCCEEEEECCE
T ss_conf 9999985---6-----------7899999992862106877645331----0000398876441333