HHsearch results for GI: 255764496 and protein with PDBid: 3goc_A
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: YES; 1.60A {Streptomyces avermitilis ma-4680}
Probab=96.41 E-value=0.0013 Score=44.11 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=54.0
Q ss_pred CEEEEEECCCCCCC-CCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 16999707443775-40488888516872803232110244445541168998999999997753131112333333334
Q gi|255764496|r 380 KRIEIYDNSHIMGC-SAVGCMVVVGENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEY 458 (616)
Q Consensus 380 ~rIE~fDiSh~~G~-~~Vas~Vvf~~g~~~K~~YR~f~Ik~~~v~~~DD~~~m~Evi~RR~~r~~~~~~~l~~~~~~~~~ 458 (616)
++|-|+|+|.-.+. .++|++||++-.... --+..+-......-..--|-+.||+-- +..+.+.
T Consensus 40 ~~VaGvDvsy~~~~~~~~a~~Vvl~~~~~~-~v~~~~~~~~~~~PYIPG~LaFRE~p~--~l~al~~------------- 103 (237)
T 3goc_A 40 GRVTGVDVAYDDERDVVVAAAVVLDAATLD-VVAEATAVGEVSFPYVPGLLAFREIPT--VLAALDA------------- 103 (237)
T ss_dssp SEEEEEEEEECSSSSEEEEEEEEEETTTCC-EEEEEEEEEECCSCCCTTCGGGGTHHH--HHHHHHT-------------
T ss_pred CEEEEEEEEEECCCCEEEEEEEEEECCCCE-EEEEEEEEEECCCCCCCCHHHHHHHHH--HHHHHHH-------------
T ss_conf 789999866856998699999999889854-999999994047875653254520189--9999985-------------
Q ss_pred CCCCCCCEEEEECC-HHH---HHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 54579848998098-589---9999999997588778718999718
Q gi|255764496|r 459 SFPSWPDVVILDGG-KGQ---LSAAQGVLKKLNVENRITIISIAKG 500 (616)
Q Consensus 459 ~~~~~PDLilIDGG-kgQ---ln~a~~vl~~l~i~~~i~viglaK~ 500 (616)
....||||||||= ..| +..|-.+ |+..++|.||+||.
T Consensus 104 -l~~~PdlllvDG~Gi~HPR~~GlAsHl----Gv~l~~PtIGVAK~ 144 (237)
T 3goc_A 104 -LPCPPGLIVCDGYGVAHPRRFGLASHL----GVLTGLPTIGVAKN 144 (237)
T ss_dssp -SSSCCSEEEEESCSSCSTTSCCHHHHH----HHHHCSCEEEEESS
T ss_pred -CCCCCCEEEECCCEEECCCCCCHHHEE----EECCCCCEEEEECC
T ss_conf -678999999828602278766642203----21059886754144