HHsearch alignment for GI: 255764497 and conserved domain: COG1177
>COG1177 PotC ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].
Probab=99.93 E-value=1.2e-21 Score=173.40 Aligned_cols=226 Identities=15% Similarity=0.130 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC--CC---CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-
Q ss_conf 99999999999999986410233--13---5203668707406899999999999999999999999999999715026-
Q gi|255764497|r 23 LAFVLVIGIINILLHGIQETTVP--RD---IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL- 96 (587)
Q Consensus 23 ~~~~~v~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~l~~~~~~Tl~~~~~~~~~~~~ig~~~a~~~~~~~~~- 96 (587)
T Consensus 20 ~~~fLylPi~~~v~~Sfn~~~~~~~~p~G~Sl~WY~~l~~~~~~~~a~~~Sl~IA~~s~~~s~~lg~~aA~al~r~~~~g 99 (267)
T COG1177 20 VLLFLYLPLLVLVLYSFNSSRLGLVFPPGFSLKWYGALFSDPRLLSALWNSLLIALLSALLATLLGTLAALALARYRFRG 99 (267)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 99999999999999850588877778998788999998578489999999999999999999999999999999704026
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
Q ss_conf 78999999999743289999999999840145542104799999999985359999999999729989999999628882
Q gi|255764497|r 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 (587)
Q Consensus 97 ~~~~~~~l~~~~~iP~~~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~l~~i~~~l~eaa~~~Ga~~ 176 (587)
T Consensus 100 ~~~~~~l~~~PlvvP~Iv~gi~ll~~f~~~~---~~~~~~~ivlaH~~~~lP~v~~~v~a~l~~~d~~L~eAA~dLGAs~ 176 (267)
T COG1177 100 KNLLEGLILLPLVVPDIVTGIALLLLFAALG---LPGGFWTIVLAHIVFALPFVVVVVSARLQGFDRSLEEAARDLGASP 176 (267)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
T ss_conf 8999999974241509999999999999868---8752999999999998668999999999738967999998769988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 0123655526215789999999999998998999997354442036788999999863113256999999999999999
Q gi|255764497|r 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 (587)
Q Consensus 177 ~~~f~~v~lP~~~P~i~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 255 (587)
T Consensus 177 ~~~f~~V~LP~i~PgIlsg~llaF~~S~Defvit~f~~gp~~~----TLP~~i~s~~r~~~~P~i~Alstll~~~~~ll 251 (267)
T COG1177 177 WQTFRRVTLPLILPGILSGALLAFTLSFDEFVITFFLAGPGFT----TLPLQIYSMIRRGITPEINALSTLLLLLSLLL 251 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC----CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8898997697527999999999999998677863113289987----21899999865589819999999999999999