HHsearch alignment for GI: 255764497 and conserved domain: COG1177

>COG1177 PotC ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].
Probab=99.93  E-value=1.2e-21  Score=173.40  Aligned_cols=226  Identities=15%  Similarity=0.130  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCC--CC---CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-
Q ss_conf             99999999999999986410233--13---5203668707406899999999999999999999999999999715026-
Q gi|255764497|r   23 LAFVLVIGIINILLHGIQETTVP--RD---IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL-   96 (587)
Q Consensus        23 ~~~~~v~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~l~~~~~~Tl~~~~~~~~~~~~ig~~~a~~~~~~~~~-   96 (587)
T Consensus        20 ~~~fLylPi~~~v~~Sfn~~~~~~~~p~G~Sl~WY~~l~~~~~~~~a~~~Sl~IA~~s~~~s~~lg~~aA~al~r~~~~g   99 (267)
T COG1177          20 VLLFLYLPLLVLVLYSFNSSRLGLVFPPGFSLKWYGALFSDPRLLSALWNSLLIALLSALLATLLGTLAALALARYRFRG   99 (267)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             99999999999999850588877778998788999998578489999999999999999999999999999999704026


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
Q ss_conf             78999999999743289999999999840145542104799999999985359999999999729989999999628882
Q gi|255764497|r   97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG  176 (587)
Q Consensus        97 ~~~~~~~l~~~~~iP~~~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~l~~i~~~l~eaa~~~Ga~~  176 (587)
T Consensus       100 ~~~~~~l~~~PlvvP~Iv~gi~ll~~f~~~~---~~~~~~~ivlaH~~~~lP~v~~~v~a~l~~~d~~L~eAA~dLGAs~  176 (267)
T COG1177         100 KNLLEGLILLPLVVPDIVTGIALLLLFAALG---LPGGFWTIVLAHIVFALPFVVVVVSARLQGFDRSLEEAARDLGASP  176 (267)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
T ss_conf             8999999974241509999999999999868---8752999999999998668999999999738967999998769988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf             0123655526215789999999999998998999997354442036788999999863113256999999999999999
Q gi|255764497|r  177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY  255 (587)
Q Consensus       177 ~~~f~~v~lP~~~P~i~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  255 (587)
T Consensus       177 ~~~f~~V~LP~i~PgIlsg~llaF~~S~Defvit~f~~gp~~~----TLP~~i~s~~r~~~~P~i~Alstll~~~~~ll  251 (267)
T COG1177         177 WQTFRRVTLPLILPGILSGALLAFTLSFDEFVITFFLAGPGFT----TLPLQIYSMIRRGITPEINALSTLLLLLSLLL  251 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC----CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             8898997697527999999999999998677863113289987----21899999865589819999999999999999