HHsearch alignment for GI: 255764497 and conserved domain: PRK09471
>PRK09471 oppB oligopeptide transporter permease; Reviewed.
Probab=99.33 E-value=9.4e-10 Score=87.20 Aligned_cols=203 Identities=14% Similarity=0.074 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCC
Q ss_conf 88999999999999999999731000011245436--67899985446677544469999999998315-------5665
Q gi|255764497|r 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR--PHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-------YHLN 447 (587)
Q Consensus 377 ~~l~~~~~~tl~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~-------~~~~ 447 (587)
T Consensus 88 ~~i~~~lp~Tl~L~~~a~~i~~~lgi~lGi~aa~~~~~~~D~~~~~~~~~~~siP~F~la~lli~iF~~~l~~~P~~g~~ 167 (306)
T PRK09471 88 DLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGFAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWN 167 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99998889999999999999999999999999983475161999999999999899999999988999721763778887
Q ss_pred H--HH---HHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0--47---999999999999999999999-97399899999997498878998999857457789999999999999999
Q gi|255764497|r 448 P--NL---WLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 (587)
Q Consensus 448 ~--~~---~~~~~~~~~~~~~~~~~~~~g-l~~i~~~l~eaa~~lGa~~~~~~~~V~LPl~~P~i~~g~~~a~~~a~~~~ 521 (587)
T Consensus 168 ~~~~~~liLP~~~l~l~~~~~~~r~~R~~~~~~l~~dyV~~ArakGl~~~~i~~rh~lrnal~P~it~~~~~~~~ll~Gs 247 (306)
T PRK09471 168 GGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGS 247 (306)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 52078875369999999999999999999999987799999998699840073001298429999999999999984587
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99998505564422378379999999734979899999999999999999972157899987633
Q gi|255764497|r 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 (587)
Q Consensus 522 ~~ae~~~~~~~~~~~~GlG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~r~~ 586 (587)
T Consensus 248 vivE~iF------~~PGiG~l~~~Ai~~~D~p~v~g~~l~~a~~~i~~nll~-Dil~~~lDPRiR 305 (306)
T PRK09471 248 MVIETIF------GLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIV-DVLYAVIDPKIR 305 (306)
T ss_pred HHHHHHH------CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCC
T ss_conf 1210986------476759999999980498999999999999999999999-999997297558