HHsearch alignment for GI: 255764497 and conserved domain: PRK09497
>PRK09497 potB spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.94 E-value=8.6e-24 Score=189.08 Aligned_cols=229 Identities=16% Similarity=0.128 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC-----CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 9999999999999999864102331-----35203668707406899999999999999999999999999999715026
Q gi|255764497|r 22 LLAFVLVIGIINILLHGIQETTVPR-----DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 (587)
Q Consensus 22 ~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~Tl~~~~~~~~~~~~ig~~~a~~~~~~~~~ 96 (587)
T Consensus 18 ~l~~f~~~Pl~~~i~~SF~~~~~~~~~~~~~tl~ny~~lf-~~~~~~~l~nSl~~a~~~tvi~~~ig~~~A~~l~~~~~~ 96 (285)
T PRK09497 18 WLVLFVFLPNLMIIGTSFLTRDDANFVKMVFTLDNYTRLL-DPLYAEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHK 96 (285)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999999999999962888887776734289999998-389999999999999999999999999988863016754
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 7-899999999974328999999999984014--------------5542104799999999985359999999999729
Q gi|255764497|r 97 G-MVLVPILDIMQSIPILGFLTFTVVYFMNLY--------------PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 (587)
Q Consensus 97 ~-~~~~~~l~~~~~iP~~~~~~~~~~~f~~~~--------------~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~l~~i 161 (587)
T Consensus 97 ~r~~~~~l~~~P~~~p~~v~~~~~~~~~~~~G~ln~~l~~lg~~~~p~~~l~~~~~vii~~v~~~lPf~~l~l~a~l~~i 176 (285)
T PRK09497 97 VRPLLLFLLIVPFWTNSLIRIYGLKIFLGTKGYLNEFLLWLGVIDTPIRIMFTESAVIIGLVYILLPFMVLPLYSSIEKL 176 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHEEECHHHHHHHHHHHHCC
T ss_conf 38999999999998799999999999814330788999981575662354234988878753131206774378788408
Q ss_pred CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-HHHHCCHHH
Q ss_conf 9899999996288820123655526215789999999999998998999997354442036788999999-863113256
Q gi|255764497|r 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL-AIKEQDLLA 240 (587)
Q Consensus 162 ~~~l~eaa~~~Ga~~~~~f~~v~lP~~~P~i~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~g~g~~~~~-~~~~~~~~~ 240 (587)
T Consensus 177 ~~~l~EAA~~lGAs~~~~F~~I~lPl~~Pgi~~~~il~fi~s~~~F~~~~~lgG~~~~----~l~~~i~~~~~~~~~~~~ 252 (285)
T PRK09497 177 DKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLGGAKNL----LIGNVIKSQFLNIRDWPF 252 (285)
T ss_pred CHHHHHHHHHCCCCHHHEEHHEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC----HHHHHHHHHHHHCCCCHH
T ss_conf 9689999987599978913202208108999999999999998876210010489755----299999999987069069
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|255764497|r 241 ILYAMLTMLGVIFLY 255 (587)
Q Consensus 241 ~~~~~~~i~~~~~~~ 255 (587)
T Consensus 253 aaA~svil~~i~~~~ 267 (285)
T PRK09497 253 GAATSITLTIVMGLM 267 (285)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999