HHsearch alignment for GI: 255764497 and conserved domain: PRK10417
>PRK10417 nikC nickel transporter permease NikC; Provisional.
Probab=99.35 E-value=8.6e-10 Score=87.49 Aligned_cols=205 Identities=12% Similarity=0.023 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 688999999999999999999731000011245436-6789998544667754446999999999831556650479999
Q gi|255764497|r 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR-PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 (587)
Q Consensus 376 ~~~l~~~~~~tl~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (587)
T Consensus 59 ~srll~G~r~sl~i~l~~~~~~~~iG~~lG~~ag~~gg~~d~~~~~~~d~~~~iP~lll~i~l~~~~g~~~----~~~il 134 (272)
T PRK10417 59 FSRLMAGTRVSLGSVMACLLLVLALGLVIGGSAGLLGGRVDQATMRVADMFMTFPTSILSFFMVGVLGTGL----TNVII 134 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC----HHHHH
T ss_conf 99999999999999999999999999999999997187612477777889862862877888886448972----58999
Q ss_pred HHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999999-97399899999997498878998999857457789999999999999999999985055644
Q gi|255764497|r 455 LMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 (587)
Q Consensus 455 ~~~~~~~~~~~~~~~~g-l~~i~~~l~eaa~~lGa~~~~~~~~V~LPl~~P~i~~g~~~a~~~a~~~~~~ae~~~~~~~~ 533 (587)
T Consensus 135 ~l~l~~w~~~ar~iR~~~l~~~~~~yV~AAr~~G~s~~~I~~rhilPni~~~i~v~~~~~~~~~Il~~a~LsFLGlG~~- 213 (272)
T PRK10417 135 AIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLLGAVIPSLLVLATLDIGHMMLHVAGLSFLGLGVT- 213 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-
T ss_conf 9999889999999999999999899999999839587783220176763789999999999999999999999047899-
Q ss_pred CCCCCHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 223783799999997349--79899999999999999999972157899987633
Q gi|255764497|r 534 LRTTGLGAYIAESTEKGS--FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 (587)
Q Consensus 534 ~~~~GlG~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~r~~ 586 (587)
T Consensus 214 pp~~~WG~ml~~~~~~l~~~pw~~~~P~~~i~l~vl~~nll-gd~Lrd~ldP~l~ 267 (272)
T PRK10417 214 APTAEWGVMINDARQFIWTQPLLMFWPGLALFISVMAFNLL-GDALRDHLDPHLV 267 (272)
T ss_pred CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCC
T ss_conf 99988999999999999978499999999999999999999-9999996096645