HHsearch alignment for GI: 255764497 and conserved domain: PRK10914
>PRK10914 dipeptide transporter permease DppB; Provisional.
Probab=99.30 E-value=2.5e-09 Score=84.08 Aligned_cols=204 Identities=18% Similarity=0.138 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------CC
Q ss_conf 6889999999999999999997310000112454366--78999854466775444699999999983155-------66
Q gi|255764497|r 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP--HISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-------HL 446 (587)
Q Consensus 376 ~~~l~~~~~~tl~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~-------~~ 446 (587)
T Consensus 89 ~~~i~~~lp~Tl~L~~~a~il~~~igi~lGi~aa~~~~~~~D~~~~~~~~~~~siP~F~lallli~if~~~l~~~P~~G~ 168 (339)
T PRK10914 89 WEEFVPRFKATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGR 168 (339)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99998727258999999999999999999999998527511136788898612306999999999999999574777676
Q ss_pred -CH-------------------------H-----HHH---HHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHCCCCHH
Q ss_conf -50-------------------------4-----799---9999999999999999999-97399899999997498878
Q gi|255764497|r 447 -NP-------------------------N-----LWL---SLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGW 491 (587)
Q Consensus 447 -~~-------------------------~-----~~~---~~~~~~~~~~~~~~~~~~g-l~~i~~~l~eaa~~lGa~~~ 491 (587)
T Consensus 169 ~~~~~~~~~~~p~~g~~~~~~~~~g~~~~~~~~l~hliLP~l~L~l~~~a~~~r~~R~~~~~~l~~dyV~~ArakGl~~~ 248 (339)
T PRK10914 169 VSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRM 248 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 76531246666655410011142045113788999999999999999999999999999999983499999998594933
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99899985745778999999999999999999998505564422378379999999734979899999999999999999
Q gi|255764497|r 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 (587)
Q Consensus 492 ~~~~~V~LPl~~P~i~~g~~~a~~~a~~~~~~ae~~~~~~~~~~~~GlG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (587)
T Consensus 249 ~i~~~h~lrnal~P~it~~g~~~~~ll~GsvivE~vF------~~pGiG~l~~~Ai~~rD~pvi~g~~l~~~~~~i~~nl 322 (339)
T PRK10914 249 RVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIF------SWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNL 322 (339)
T ss_pred HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 1404983986099899999999999997699986986------7757699999999835889999999999999999999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 972157899987633
Q gi|255764497|r 572 FLWHPLYLYGTRCLR 586 (587)
Q Consensus 572 l~~~~l~~~~~~r~~ 586 (587)
T Consensus 323 i~-Dil~~~lDPRiR 336 (339)
T PRK10914 323 LV-DLLYGVVNPRIR 336 (339)
T ss_pred HH-HHHHHHCCCCCC
T ss_conf 99-999986284047