HHsearch alignment for GI: 255764497 and conserved domain: TIGR01726
>TIGR01726 HEQRo_perm_3TM amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; InterPro: IPR010065 This entry represents one of several classes of multiple membrane spanning regions found in the inner membrane component of binding-protein-dependent transport systems. The region covered by this entry generally is predicted to contain three transmembrane helices. Substrate specificities attributed to members of this family include histidine, arginine, glutamine, glutamate, and (in Agrobacterium) the opines octopine and nopaline.; GO: 0005215 transporter activity, 0006810 transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.
Probab=96.44 E-value=0.063 Score=30.40 Aligned_cols=89 Identities=19% Similarity=0.204 Sum_probs=67.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 406899999999999999999999999999999-7150267899999999974328999999999984014554210479
Q gi|255764497|r 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA-AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 (587)
Q Consensus 58 ~~~l~~~~~~Tl~~~~~~~~~~~~ig~~~a~~~-~~~~~~~~~~~~~l~~~~~iP~~~~~~~~~~~f~~~~~~~~~~~~~ 136 (587)
T Consensus 2 ~p~l~~G~~~Tl~~~~~~~~~g~~~Gl~~al~r~s~~~~l~~~~~~Y~~~~Rg~PlLvql--f~~yfgLP~~Gi~l~~~~ 79 (99)
T TIGR01726 2 LPFLLKGLLLTLLISVLSILLGLVLGLLLALLRLSGNRPLRWIATVYVELFRGTPLLVQL--FFIYFGLPLIGIRLSPLT 79 (99)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCCCCCHHH
T ss_conf 178999999999999999999999999999998713599999999999999620799999--999984354277067789
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999998535
Q gi|255764497|r 137 AAIFAIFTSQVW 148 (587)
Q Consensus 137 ~~i~~~~~~~~~ 148 (587)
T Consensus 80 Aa~~al~l~~~A 91 (99)
T TIGR01726 80 AAVIALTLFEGA 91 (99)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999998799