BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|255764497|ref|YP_003065010.2| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] (587 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|255764497|ref|YP_003065010.2| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] gi|254547848|gb|ACT57070.2| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] Length = 587 Score = 1186 bits (3067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 587/587 (100%), Positives = 587/587 (100%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS Sbjct: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV Sbjct: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF Sbjct: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA Sbjct: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY Sbjct: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA Sbjct: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP Sbjct: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK Sbjct: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG Sbjct: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL Sbjct: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 >gi|315121797|ref|YP_004062286.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495199|gb|ADR51798.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 555 Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/553 (76%), Positives = 485/553 (87%) Query: 34 ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93 +L +QETTVP DIVDIVPITLDV SLP+YASRTTLRML A+V+SLLFTF+YATLAAKS Sbjct: 1 MLFRSVQETTVPCDIVDIVPITLDVSSLPKYASRTTLRMLIAIVVSLLFTFIYATLAAKS 60 Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RRLGMVL+PILDIMQSIPILGFLTFTV+YF++LYPG+VIGAE AAIFAIFTSQVWNMTFS Sbjct: 61 RRLGMVLIPILDIMQSIPILGFLTFTVIYFISLYPGRVIGAEFAAIFAIFTSQVWNMTFS 120 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 MYQSLCNIP+DLEEVSRSFRLSGWQKFW L VPFS+PGLVWNMM+SMSGGWFFVVA+EMI Sbjct: 121 MYQSLCNIPKDLEEVSRSFRLSGWQKFWNLDVPFSIPGLVWNMMISMSGGWFFVVAAEMI 180 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 VVGDTVI LPGIGSY+ALAIKE+ L+++LYAMLTM+GVI LYDQLLFRP+I WSNKFRLE Sbjct: 181 VVGDTVISLPGIGSYVALAIKERSLVSVLYAMLTMVGVILLYDQLLFRPIIAWSNKFRLE 240 Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333 RTT ++ +D WVL LFRKTNFLRF+G+SS+ PLS N KL R I+F+FP+N Sbjct: 241 RTTAVHSSDPWVLSLFRKTNFLRFLGHSSYKIILPLSCNFNKLYRLFNYIQFYFPDNLGL 300 Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 N+++SY+LDI WF V +A+GIAW+S YI+++ Y D+LYV WLGCITM RVV+L Sbjct: 301 FSCNKKISYILDIIWFLAVYSIAMGIAWKSFEYIIDNLGYYDILYVFWLGCITMLRVVIL 360 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 IIIA+IIW+P+G+WIG RPHI+SKIQPFAQ LAAFP+N+FFPLVVS + YY LNPN+WLS Sbjct: 361 IIIATIIWVPIGVWIGMRPHIASKIQPFAQFLAAFPSNIFFPLVVSIIFYYDLNPNIWLS 420 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 LMI GTQWYILFN+I+G SAFPNDFKEV SFH+TGW WRY+ILPGIFP+YVTGAITA Sbjct: 421 SLMILGTQWYILFNIISGTSAFPNDFKEVVQSFHVTGWYRWRYVILPGIFPFYVTGAITA 480 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 CGGAWNASIVSEVASWG+I+LR TGLGAYIAESTEKG+FPEV LG+L+MCCFVL LN FL Sbjct: 481 CGGAWNASIVSEVASWGNIYLRATGLGAYIAESTEKGNFPEVALGILVMCCFVLFLNIFL 540 Query: 574 WHPLYLYGTRCLR 586 W PLY Y R LR Sbjct: 541 WRPLYRYSARHLR 553 >gi|146337816|ref|YP_001202864.1| ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146190622|emb|CAL74624.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 577 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/588 (56%), Positives = 431/588 (73%), Gaps = 13/588 (2%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 M L ++ + + PNI+D++A ++V+G + ++++G ++TT+P +D P++LD + Sbjct: 1 MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSN 60 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA RTTLRML A++ SL+FTFVYA LAAKSRR +VL+P+LDI+QS+PILGFLTFTV Sbjct: 61 LPLYALRTTLRMLLAIICSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV 120 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 V+FMNL+PGKV+GAELA +FAIFTSQ WNMTFSMYQS+ N+P+DLEE +RSF LSGWQ+F Sbjct: 121 VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF 180 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 W L VP++MPGL+WN MMSMSGGWFFVVASE I VG+T + LPGIGSY+ALAI+++DL A Sbjct: 181 WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA 240 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 I A+LTML VI YDQLLFRP++ W++KFR E+T P SW+L LFR+T LR Sbjct: 241 IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALR---- 296 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF-CVVCGVAIGI 359 LS + RT +R ++P+ + + S ++D W VV G A Sbjct: 297 -------SLSIPFAAINRTFSNLRLNWPKAWSGPVRHAPPSQLVDGLWLAAVVVGCAYA- 348 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W++ Y+ DV I G IT+ RV VLI +AS+IW+PVG+WIG RP ++ ++Q Sbjct: 349 GWKTYLYLSTTLAPSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERMQ 408 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P AQ LAAFPAN+ FP+ V + Y LN ++WLS LMI GTQWYILFNVIAGASAFP+D Sbjct: 409 PLAQFLAAFPANLAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDL 468 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 +E A+S H+TGWRWW ++LPG+FPYY+TGAITA GG+WNA+IV+EVASWG HL +GL Sbjct: 469 REAAASLHLTGWRWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGL 528 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GAYIA +TE+G FP VVLG+ +MC V NR LW PLY +G R LRL Sbjct: 529 GAYIAAATERGDFPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRL 576 >gi|148258661|ref|YP_001243246.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146410834|gb|ABQ39340.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 577 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/587 (56%), Positives = 422/587 (71%), Gaps = 11/587 (1%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 M L + + + PNI+D++A ++V+G + ++++G ++TT P +D P++LD + Sbjct: 1 MMLQDFRTAVLRETVRPNIWDVVALIIVVGAMVLIVYGGEQTTQPLSALDTAPVSLDPSN 60 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA RTTLRML A+ SL+FTFVYA LAAKSRR +VL+P+LDI+QS+PILGFLTFTV Sbjct: 61 LPLYALRTTLRMLLAITCSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV 120 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 V+FMNL+PGKV+GAELA +FAIFTSQ WNMTFSMYQS+ N+P+DLEE +RSF LSGWQ+F Sbjct: 121 VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF 180 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 W L VP++MPGL+WN MMSMSGGWFFVVASE I VG+T + LPGIGSY+ALAI+++DL A Sbjct: 181 WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA 240 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 I A+LTML VI YDQLLFRP++ W++KFR E+T P SW+L LFR+T LR Sbjct: 241 IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGDPPSSWMLDLFRRTRALR---- 296 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 LS L R +R ++P + S ++D W VV Sbjct: 297 -------KLSVPFAALNRAFSNLRLNWPTAWSGPVRRAPPSQLVDGLWLAVVVIGCAYAG 349 Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W++ Y+ DVL G IT+ RV VLI +AS+IW+PVG+WIG RP ++ +IQP Sbjct: 350 WKTYLYLSATLAPSDVLSATGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERIQP 409 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 AQ LAAFPAN+ FP+ V + Y LN N+WLS LMI GTQWYILFNVIAGASAFP D + Sbjct: 410 LAQFLAAFPANLAFPVFVVLIVRYGLNANVWLSPLMILGTQWYILFNVIAGASAFPTDLR 469 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 E A+S H+TGWRWW ++LPG+FPYY+TGAITA GG+WNA+IV+EVASWG HL +GLG Sbjct: 470 EAAASLHLTGWRWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLG 529 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 AYIA +TE+G FP VVLG+ +MC V NR LW PLY +G R LRL Sbjct: 530 AYIAAATERGDFPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRL 576 >gi|148252998|ref|YP_001237583.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146405171|gb|ABQ33677.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 585 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/589 (55%), Positives = 428/589 (72%), Gaps = 14/589 (2%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 M L ++ ++R PN++DL+A +LVIG + ++++G ++TT+P +D+ P++LD + Sbjct: 8 MRLQDLRLAVLTRAPRPNVWDLIALILVIGAMVLIVYGGKQTTLPLSALDVSPVSLDPAN 67 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA RTTLRML A+ S +FTF+YA +AAKSRR MVL+P+LDI+QS+PILGFLTFTV Sbjct: 68 LPFYALRTTLRMLLAIACSTVFTFIYAAVAAKSRRAEMVLIPLLDILQSVPILGFLTFTV 127 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 V+F+NL+PG+V+GAELA +FAIFTSQ WNMTFSMYQSL N+P+DL+E S+SF LSGWQ+F Sbjct: 128 VFFLNLFPGRVLGAELACVFAIFTSQAWNMTFSMYQSLRNVPKDLDEASKSFHLSGWQRF 187 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 W L VPF+MPGL+WN MMSMSGGWFFVVASE I VG+T + LPG+GSY+ALAI+++DL A Sbjct: 188 WRLDVPFAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGVGSYVALAIEKRDLAA 247 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 I YA+ TML VI +YDQLLFRP++ W++KFR E+T SW+L LFR+T LR Sbjct: 248 IGYAIFTMLLVIIVYDQLLFRPIVAWADKFRFEQTASGDAPTSWMLDLFRRTRALR---- 303 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIG 358 L+ L R + +P L+ S S ++D WF ++ Sbjct: 304 -------ALTLPFAALNRAFSNLSAEWPRA-LRPSSKPGAPPSRLIDALWFAIIGIATGY 355 Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 A+++ Y+ + DV + G T+ RV+ LI +A++IW+P+G+WIG RP I+ ++ Sbjct: 356 AAYKAYYYLSANLQLSDVYEAVLGGFATLLRVITLIALATLIWVPIGVWIGLRPRIAERV 415 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 QP AQ LAAFPAN+ FP+ V + +Y LN N+WLS LMI GTQWYILFNVIAGASAFP+D Sbjct: 416 QPLAQFLAAFPANLAFPVFVLWIVHYGLNSNIWLSPLMILGTQWYILFNVIAGASAFPSD 475 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 +E A+S H+TGWRWW +ILPGIFPYYVTGAITA GG+WNASIV+EVASWG HL TG Sbjct: 476 LREAAASLHLTGWRWWIKVILPGIFPYYVTGAITASGGSWNASIVAEVASWGDTHLSATG 535 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGAYIA++TE G FP VVLG+ IMC V NR W PLY +G R LRL Sbjct: 536 LGAYIAKATEDGDFPRVVLGIAIMCIMVTLFNRLFWRPLYAFGERRLRL 584 >gi|222106535|ref|YP_002547326.1| ABC-type anion transport system, duplicated permease component [Agrobacterium vitis S4] gi|221737714|gb|ACM38610.1| ABC-type anion transport system, duplicated permease component [Agrobacterium vitis S4] Length = 556 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/566 (56%), Positives = 413/566 (72%), Gaps = 11/566 (1%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 ++A +L+IG+I + +G + TT+P +D P++LD +LP YA RT LRML+A+V SL+ Sbjct: 1 MMALLLIIGVIVLFAYGERVTTIPLSALDAAPLSLDPTNLPIYALRTILRMLAAIVFSLI 60 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 FT +YA++AAKSRR MV++P+LDI+QS+PILGFLTFTV +F+NL+PG+VIGAELAA+FA Sbjct: 61 FTLIYASVAAKSRRAEMVMIPVLDILQSVPILGFLTFTVTFFLNLFPGRVIGAELAAVFA 120 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IFTSQ WNMTFS+YQS+ + P+DLEE +RSF+LSGWQ+FW L VPF+MPGLVWN MMSMS Sbjct: 121 IFTSQAWNMTFSLYQSMRSQPKDLEEATRSFQLSGWQRFWRLDVPFAMPGLVWNTMMSMS 180 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GGWFFVVASE I VG+T + LPGIGSY+ALAIK+QD+LA+ YA++ ML VI LYDQL+FR Sbjct: 181 GGWFFVVASEAITVGNTTVTLPGIGSYVALAIKQQDILAVFYAVIAMLAVILLYDQLMFR 240 Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLG 321 P++ W++KFR E T SW+L L RK R + +PL N V + TL Sbjct: 241 PLVAWADKFRFETTASGVAPSSWMLDLLRKARVTRLL-------LAPL-NWVARQLWTLR 292 Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381 + + + +N RV + I A I S Y+ + ++ VI Sbjct: 293 LPKLRSTGSKTASPANSRVIDWIWIAIIACAAAWAAYI---SFDYLRASIGWSEIPTVIL 349 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 G IT+ RV+VL+ IA+++W+PVG+WIG RP +S K+QP AQ LAAFPAN+ FP+ V + Sbjct: 350 YGSITLLRVIVLMAIATVVWVPVGVWIGLRPKLSEKVQPLAQFLAAFPANIAFPVFVVVI 409 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 ++ LN ++WLS LMI GTQWYILFNVIAGASAFP+D KE A SFHITGWRWW +ILPG Sbjct: 410 VHFGLNADIWLSPLMILGTQWYILFNVIAGASAFPSDLKEAARSFHITGWRWWFKVILPG 469 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 IFPYY+TGAITA GG+WNASIV+EVASWG L T GLG+YIA +T G FP VVLG+++ Sbjct: 470 IFPYYITGAITASGGSWNASIVAEVASWGDTQLTTPGLGSYIANATTAGDFPRVVLGIIV 529 Query: 562 MCCFVLALNRFLWHPLYLYGTRCLRL 587 MC FV NR +W PLY YG LRL Sbjct: 530 MCTFVTLFNRLVWRPLYAYGESRLRL 555 >gi|158424701|ref|YP_001525993.1| putative ABC transporter nitrate permease [Azorhizobium caulinodans ORS 571] gi|158331590|dbj|BAF89075.1| putative ABC transporter nitrate permease [Azorhizobium caulinodans ORS 571] Length = 582 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/575 (54%), Positives = 408/575 (70%), Gaps = 11/575 (1%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RR F FDL AF+LV G+ + G Q+T +P ++ PI+L LP+YA RTTLRM Sbjct: 18 RRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPISLSPWDLPEYALRTTLRM 77 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+A+V SL+FTF+Y LAAKSRR MVL+P+LDI+QS+P+LGFL+FTV++FMNL+PGKVI Sbjct: 78 LAAIVASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGFLSFTVLFFMNLFPGKVI 137 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E+AA+FAIFTSQ WNMTFS YQSL +PRDL EVSR FRL+GWQ+FW L VPFSMPGL Sbjct: 138 GVEMAAVFAIFTSQAWNMTFSFYQSLKTLPRDLVEVSRGFRLTGWQRFWRLEVPFSMPGL 197 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 VWN MMSMSGGWFFVVASE I VG+T I LPGIG+Y++ AI E++L A+ +++ ML +I Sbjct: 198 VWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAERNLTAVAWSVGAMLVII 257 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 +YDQLLFRP++ W+++FR E++ G P SWVL + ++ + R + SP Sbjct: 258 LIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLFRLL-------LSP---- 306 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 V L R L + P + S +D W +V +A+ W + ++ Sbjct: 307 VGGLFRGLAALPLRLPVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVSFVATEVG 366 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V WLG +T+ RV VLI +AS+IW+PVG+WIG RP +++ +QP AQ LAAFPAN+ Sbjct: 367 LAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGVWIGLRPKVANALQPVAQFLAAFPANI 426 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V + L+PN+WLS LM+ GTQWYILFNVIAGASAFPND KE ASSFH+ G + Sbjct: 427 VFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASSFHLRGAQ 486 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WW +ILPG+FPYYVTGA+TA GG+WNASIV+EVASWG LR GLG+YIA++T + Sbjct: 487 WWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIADATTAADY 546 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P + LG+ +M +V+A NR LW PL+ + + LRL Sbjct: 547 PRITLGIAVMSLYVIAFNRTLWRPLFDFAAKRLRL 581 >gi|167585833|ref|ZP_02378221.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 584 Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFIAFPLIICVIAMAVVGFHETMAPITTLNTQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDKNLGAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + F+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKAARIP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P ++ S+ DI W +V + W+ + ++ T Sbjct: 317 LRLPLS-GAVRFTLPR------VEKKASFAADIAWALLVLAGTAYVVWRVVSFVAAGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV+VLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 370 AEVGHVFTLGLITLLRVIVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++++ LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 430 FPAFVIVIAHFRLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG+ + GLGAYIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGNTKIEAHGLGAYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 550 KIILGITVMSLFVTLFNRLLWRPLYAYAESKLRL 583 >gi|171321263|ref|ZP_02910228.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] gi|171093457|gb|EDT38635.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] Length = 585 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W V I W+ + ++ T Sbjct: 318 LRLPLS-GTMRFTLPK------VEKKASRTVDIAWSGFVLIGTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 ADVGHVLVLGLITLLRVVVLITIASVIWVPIGVWVGLRPRLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 >gi|167841086|ref|ZP_02467770.1| ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 585 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 412/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQKISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGIVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIAEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P ++ S+ DI W +V + W+ +G++ T Sbjct: 318 LRLPLS-GAVRFTLPR------VEKKASFAADIVWAILVLAGTAYVVWRVVGFVSTGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVV+LI +AS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVVLLIALASVVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ Y LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARYRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE+ WG ++ GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSELVQWGDTRIQAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|134296585|ref|YP_001120320.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] gi|134139742|gb|ABO55485.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] Length = 585 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIATLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W +V I W+ + ++ T Sbjct: 318 LRLPVS-GAMRFSLPK------VEKKASRTVDIAWAVLVVLATAYIVWRVVSFVATGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +VI LG IT+ RVVVLI IAS++W+P+G+ +G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVIVLGLITLLRVVVLISIASVVWVPIGVLVGLRPKLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 >gi|107023335|ref|YP_621662.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116690418|ref|YP_836041.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|170733738|ref|YP_001765685.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|105893524|gb|ABF76689.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116648507|gb|ABK09148.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|169816980|gb|ACA91563.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 585 Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W +V I W+ + ++ T Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 >gi|206560942|ref|YP_002231707.1| binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|198036984|emb|CAR52905.1| binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] Length = 585 Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPSGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W +V I W+ + ++ T Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTKIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 >gi|154245217|ref|YP_001416175.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154159302|gb|ABS66518.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 582 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/576 (55%), Positives = 412/576 (71%), Gaps = 8/576 (1%) Query: 13 RRIF-PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 RR F PN++D LAF L+ G + +++HG +ET P +D+ P++LD LP+YA RTT+R Sbjct: 13 RRTFAPNLWDALAFGLLFGGLILMVHGGKETLAPLAALDLAPVSLDPAMLPEYALRTTMR 72 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML+A+V SL+FTF Y LAAKSRR MVLVP+LDI+QS+P+LGFL+FTVV FM+L+PG+V Sbjct: 73 MLAAIVASLVFTFAYGALAAKSRRAEMVLVPMLDILQSVPVLGFLSFTVVGFMSLFPGRV 132 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G ELAAIFAIFTSQ WNMTFS YQSL +PRDL+E +RSFRLSGWQ+FW L VPFSMPG Sbjct: 133 LGVELAAIFAIFTSQAWNMTFSFYQSLKTVPRDLDEATRSFRLSGWQRFWRLEVPFSMPG 192 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 LVWN MMSMSGGWFFVVASE I VGDT I LPG+GSY+ALAIKEQ+L A+ +A+L ML V Sbjct: 193 LVWNTMMSMSGGWFFVVASEAISVGDTTITLPGVGSYVALAIKEQNLAAVGWAVLAMLAV 252 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I LYDQLLFRP++ W++KFR+E + SW+L R+T + + PL Sbjct: 253 ILLYDQLLFRPLVAWADKFRVETSASGAAPRSWLLSAARRTYLFQRV-------LQPLGA 305 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + + R ++ ++ + S + W +V VA + + ++ Sbjct: 306 MLAAVPRQRLAFSAPVSQDTRRVVESAWASPWAEGIWLALVFAVAGYALYVIVAFVGTEL 365 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T +V V LG +TM RV+VLI +A++IW+P+G+WIG RP + ++QP AQ LAAFPAN Sbjct: 366 TLPEVTQVFGLGVLTMIRVIVLIALATLIWVPIGVWIGLRPRWAQRVQPLAQFLAAFPAN 425 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP V + L+P++WLS LM+ GTQWYILFNV+AGASAFPND KE AS+F I GW Sbjct: 426 IIFPFAVVAIVRLGLDPDIWLSPLMVLGTQWYILFNVVAGASAFPNDLKEAASTFRIRGW 485 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYYVTGAITA GG+WNASIV+EVASWG LR G+GAYIA++T G Sbjct: 486 NWWRKVMLPGIFPYYVTGAITASGGSWNASIVAEVASWGDTTLRAHGVGAYIADATAAGD 545 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P +VLGV +M FV+ NR LW P++ + R LRL Sbjct: 546 YPRIVLGVAVMSIFVIFFNRLLWRPMFTFAGRRLRL 581 >gi|254251726|ref|ZP_04945044.1| ABC-type anion transport system duplicated permease component [Burkholderia dolosa AUO158] gi|124894335|gb|EAY68215.1| ABC-type anion transport system duplicated permease component [Burkholderia dolosa AUO158] Length = 584 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/574 (54%), Positives = 409/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFIAFPLIICVIAMAVVGFHETMAPIGTLQAQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADRNLGAVGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G IRF P ++ S + D W VV + W+ ++ T Sbjct: 317 LRLPLS-GAIRFTLPR------VEKKASRVADATWAVVVLVATAYVVWRVFSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V LG IT+ RVVVLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 370 ADVGHVFVLGLITLLRVVVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ ++LN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 430 FPVFVIVIARFNLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583 >gi|78067194|ref|YP_369963.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77967939|gb|ABB09319.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia sp. 383] Length = 585 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPG+G+Y+A AI +++L AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGVGAYLAQAISDKNLGAIGWVILTMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + Sbjct: 258 AYDQFLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P ++ S +DI W +V + W+ + ++ T Sbjct: 318 LRLPLS-GAMRFSLPR------VEKKASRTVDIAWAILVLIGTAYVVWRVVSFVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RV VLI IAS+IW+PVG+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVLVLGLITLLRVAVLIAIASVIWVPVGVWIGLRPRLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPAFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG+ + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGNTKIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 >gi|254247536|ref|ZP_04940857.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia PC184] gi|124872312|gb|EAY64028.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia PC184] Length = 585 Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W +V I W+ + ++ T Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTVAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 584 >gi|115352494|ref|YP_774333.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|172061350|ref|YP_001809002.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gi|115282482|gb|ABI87999.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|171993867|gb|ACB64786.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 585 Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/576 (54%), Positives = 411/576 (71%), Gaps = 11/576 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHF 371 +L + G +RF P+ ++ S +DI W F ++C I W+ + ++ Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWSGFVLICTAY--IVWRVVSFVATGV 368 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T DV +V+ LG IT+ RVVVLI IAS+IW+P+G+ IG RP ++ K+QP AQ LAAFPAN Sbjct: 369 TMADVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAAFPAN 428 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW Sbjct: 429 LLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGW 488 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G Sbjct: 489 QWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAGD 548 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP+++LG+ +M FV NR LW PLY + LRL Sbjct: 549 FPKIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 >gi|254254292|ref|ZP_04947609.1| ABC-type anion transport system duplicated permease component [Burkholderia dolosa AUO158] gi|124898937|gb|EAY70780.1| ABC-type anion transport system duplicated permease component [Burkholderia dolosa AUO158] Length = 584 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 409/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +T P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDAVAFPLIICMLAMAIVGFHQTMAPIGTLQAQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRSITLPGIGAYLAQAIADRNLGAVGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGSAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G IRF P ++ S + D W VV + W+ ++ T Sbjct: 317 LRLPLS-GAIRFTLPR------VEKKASRVADATWAVVVLVATAYVVWRVFSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V LG IT+ RVVVLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 370 ADVGHVFVLGLITLLRVVVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ ++LN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 430 FPVFVVVIARFNLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583 >gi|161524071|ref|YP_001579083.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189351168|ref|YP_001946796.1| sulfonate/nitrate/taurine transporter permease [Burkholderia multivorans ATCC 17616] gi|221199378|ref|ZP_03572422.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221205720|ref|ZP_03578735.1| ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221211591|ref|ZP_03584570.1| ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160341500|gb|ABX14586.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189335190|dbj|BAG44260.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221168952|gb|EEE01420.1| ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221174558|gb|EEE06990.1| ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221180663|gb|EEE13066.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 584 Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 408/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQSQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+P +V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+GWQ+FW L VPFSMPGLV Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKLEVPFSMPGLV 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAEAIVERNLGAVGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + F+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKAARIP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L T +RF P ++ S + D+ W VV + W+ + ++ T Sbjct: 317 LRLSPTRA-MRFTLPR------VEKKASRVADVTWAVVVLLATAYVLWRVMSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVVVLI IAS++W+P+G+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 370 DEVGHVFVLGLITLLRVVVLIAIASVVWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 430 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA+ T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAQMTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583 >gi|83719463|ref|YP_441452.1| ABC transporter permease [Burkholderia thailandensis E264] gi|167580221|ref|ZP_02373095.1| ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167618330|ref|ZP_02386961.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257139872|ref|ZP_05588134.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83653288|gb|ABC37351.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 585 Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust. Identities = 312/574 (54%), Positives = 404/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ + Sbjct: 258 AYDQFLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L +RF P ++ S DI W V + +AW+ Y+ T Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTLYVAWRVFAYVKTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKAQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|167569249|ref|ZP_02362123.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 584 Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G Sbjct: 77 AAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +Q+L A+ + +LTM VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITDQNLRAVGWVILTMTIVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + + Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAK-AARI 315 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L +RF P ++ S + DI W +V I + + Y+ T Sbjct: 316 PLRVPSLDAVRFTMPR------VEKKASRVADIAWAILVIAGTIYVVSRVFVYVKTGVTL 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV++LI +AS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 370 AEVGHVFVLGLITLLRVMLLIALASLVWVPIGVWIGLRPAIAEKVQPIAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 430 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG ++ GLGAYIA++T G +P Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIQAHGLGAYIAQTTAAGDYP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 583 >gi|167561998|ref|ZP_02354914.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147] Length = 584 Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G Sbjct: 77 AAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +Q+L A+ + +LTM VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDQNLRAVGWVILTMTIVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + + Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAK-AARI 315 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L +RF P ++ S + DI W +V I + + Y+ T Sbjct: 316 PLRVPSLDAVRFTMPR------VEKKASRVADIAWAILVIAGTIYVVSRVFVYVKTGVTL 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV++LI +AS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 370 AEVGHVFVLGLITLLRVMLLIALASLVWVPIGVWIGLRPAIAEKVQPIAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 430 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG ++ GLGAYIA++T G +P Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIQAHGLGAYIAQTTAAGDYP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 583 >gi|238028311|ref|YP_002912542.1| hypothetical protein bglu_1g27720 [Burkholderia glumae BGR1] gi|237877505|gb|ACR29838.1| Hypothetical protein bglu_1g27720 [Burkholderia glumae BGR1] Length = 584 Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust. Identities = 308/574 (53%), Positives = 403/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L++ +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V G Sbjct: 77 AAMIASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVAG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGLV Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLV 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI EQ+L A+ + +LTM VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQNLHAVGWVILTMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + F+ ++ Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKMARLP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + RF P ++ S + DI W +V + W+ + ++ T Sbjct: 317 FRLP-SFDAARFALPR------VEKQASRVADIGWAILVLLGTAYVVWRVVAFVSTGVTL 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG T+ RVVVLI+IAS+IW+P+G+WIG RP ++ K QP AQ LAAFPAN+ Sbjct: 370 AEVGHVFLLGLATLLRVVVLIVIASVIWVPIGVWIGLRPALAEKAQPVAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ Y LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 430 FPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGI PYY+TGAITA GGAWNASIVSE WG GLGAYIA+ T G +P Sbjct: 490 WRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIAQMTAAGDYP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++++G+ +M FV NR LW PLY Y LRL Sbjct: 550 KIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRL 583 >gi|107025965|ref|YP_623476.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116692851|ref|YP_838384.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|170737883|ref|YP_001779143.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|105895339|gb|ABF78503.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116650851|gb|ABK11491.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|169820071|gb|ACA94653.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 584 Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust. Identities = 308/575 (53%), Positives = 407/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G +T P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + + W LS Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWL----LSQA 313 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + R V E S +R S + DI W V + + +AW+ + ++ T Sbjct: 314 ARIPLRVPSVTGTRVRE-----ASARRSSRIGDIVWGAFVILLTVYVAWRVVSFVATGVT 368 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 VAEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANL 428 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+ Sbjct: 429 LFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQ 488 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G F Sbjct: 489 WWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTAAGDF 548 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 PKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 >gi|161520447|ref|YP_001583874.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189353362|ref|YP_001948989.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160344497|gb|ABX17582.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189337384|dbj|BAG46453.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 583 Score = 628 bits (1620), Expect = e-178, Method: Compositional matrix adjust. Identities = 310/574 (54%), Positives = 402/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +ET P + I LD +LP+YA RTTLRML Sbjct: 17 RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKIALDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+GWQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI EQ+L A+ + ++ M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ SW+L L R+T + + + S + V Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSAGDAPQSWLLDLLRRTRAIHQLLVPAGWLLSQ-AARV 315 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 R L V+R + + + S D W V + + +A + + Y+ T Sbjct: 316 PLRVRALDVMR-------ARDTAQRSPSRFGDFVWAAAVIVLTLYVASRVVSYVSTGVTI 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 ADVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE +F I GW+W Sbjct: 429 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIAE T G FP Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582 >gi|221209695|ref|ZP_03582676.1| ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221170383|gb|EEE02849.1| ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 596 Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust. Identities = 308/574 (53%), Positives = 402/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +ET P + I+LD +LP+YA RTTLRML Sbjct: 30 RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKISLDPSNLPEYALRTTLRML 89 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 90 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 149 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+GWQ+FW L VPFSMPGL+ Sbjct: 150 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 209 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI EQ+L A+ + ++ M VI Sbjct: 210 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 269 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E ++ SW+L L R+T + + + S + V Sbjct: 270 AYDQLLFRPLVAWADKFRMENSSAGDAPQSWLLDLLRRTRAIHQLLVPAGWLLSQ-AARV 328 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 R L +R + + + S D W V + + +A + + Y+ T Sbjct: 329 PLRLRALDAMR-------ARETAQRSPSRFGDFVWAAAVIVLTVYVAARVVSYVSTGVTI 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 382 DDVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE +F I GW+W Sbjct: 442 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIAE T G FP Sbjct: 502 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 562 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 595 >gi|91782448|ref|YP_557654.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91686402|gb|ABE29602.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia xenovorans LB400] Length = 583 Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/575 (54%), Positives = 405/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICLIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLVFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTIVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + PL Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIH-------RLLVPLGWMF 309 Query: 314 KKLCRT-LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 K R L + F P Q+ Q+ S + DI W +V + + ++ Y+ + Sbjct: 310 AKAARVPLRLPAFQGPR--FQIPQMQKSSRVGDIVWAALVLVTTVYVVYRVFMYVRTGVS 367 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 368 LDEVWHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+ Sbjct: 428 LFPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ILPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G + Sbjct: 488 WWRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDY 547 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P++++G+ +M FV NR LW P+Y Y LRL Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|34499738|ref|NP_903953.1| nitrate ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34105589|gb|AAQ61943.1| probable ABC transporter nitrate permease [Chromobacterium violaceum ATCC 12472] Length = 564 Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/575 (54%), Positives = 415/575 (72%), Gaps = 14/575 (2%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + PN +DL+AF L++G + + GI+ET P + PI+L+ +LP+YA RTTLRML+ Sbjct: 1 MIPNRWDLIAFPLILGFLLMATTGIRETWAPITALQTAPISLEPGNLPEYALRTTLRMLA 60 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 AM SL FT VY TLAAKSRR G++LVPILDI+QS+P+LG+++FTV +F+ L+PG+V+GA Sbjct: 61 AMAASLAFTLVYGTLAAKSRRAGLLLVPILDILQSVPVLGYISFTVTFFLALFPGRVLGA 120 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIFTSQ WNMTFS YQSL +PRDL+EVS + RL+ WQKFW L VP++MPG++W Sbjct: 121 EFAAIFAIFTSQAWNMTFSFYQSLRTVPRDLQEVSVNLRLTAWQKFWKLEVPYAMPGMIW 180 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSGGWFFVVASE I VGD + LPG+GSY+ALAI+ +DL A+ + +LTM VI + Sbjct: 181 NMMMSMSGGWFFVVASEAITVGDKTVMLPGVGSYLALAIQHKDLAAVGWVILTMSVVILI 240 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQ LFRP++ W++KFRLE T +SWVL L ++T F++ P Sbjct: 241 YDQFLFRPLVAWADKFRLEDTASQNAPESWVLNLIQRTRFIQ-------QLLKPFG---- 289 Query: 315 KLCRTLGVIRFH--FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 KL +T +R + P+ L ++ VS +D+ W+ +V +A+ A + + +I Sbjct: 290 KLLKTAARLRLNISLPKG-LHSEAHTPVSRGIDVLWWALVGLIAVAAASKLVHFIATEVG 348 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +VL V LG +T+ RV +LI IAS+IW+P+G+ IG RP ++ K+QP AQ LAAFPAN+ Sbjct: 349 AWEVLKVFGLGLVTLVRVSLLIAIASLIWVPLGVLIGLRPALAEKVQPLAQFLAAFPANL 408 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V +++Y LNP++WLS L++ GTQWYILFNVIAGA+AFPNDFKE A++F I GW+ Sbjct: 409 LFPVFVIVIAHYKLNPDIWLSPLIVLGTQWYILFNVIAGATAFPNDFKEAAANFRIRGWQ 468 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ++LPGIFPYYVTGAITA GGAWNASIVSE SWG L GLGAYIA++T G + Sbjct: 469 WWRKVMLPGIFPYYVTGAITASGGAWNASIVSEFVSWGDDKLAAHGLGAYIAQTTAAGDY 528 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P+++LG+ +M FV+ NR LW P+Y LRL Sbjct: 529 PKILLGIAVMSLFVVLFNRLLWRPMYAIAENKLRL 563 >gi|254250281|ref|ZP_04943601.1| ABC-type anion transport system, duplicated permease component [Burkholderia cenocepacia PC184] gi|124876782|gb|EAY66772.1| ABC-type anion transport system, duplicated permease component [Burkholderia cenocepacia PC184] Length = 584 Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust. Identities = 309/577 (53%), Positives = 409/577 (70%), Gaps = 14/577 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G +T P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + + W LS Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWM----LSQA 313 Query: 313 VKKLCR--TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 + R +L R H S +R S + DI W V + + +AW+ + ++ Sbjct: 314 ARIPLRVPSLTGTRVHG-------ASARRSSRIGDIVWGVFVILLTVYVAWRVVSFVATG 366 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 T +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPA Sbjct: 367 VTMAEVGHVLVLGLITLLRVLVLIAIASMIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPA 426 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I G Sbjct: 427 NLLFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRG 486 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G Sbjct: 487 WQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTVAG 546 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 547 DFPKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 >gi|172063625|ref|YP_001811276.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gi|171996142|gb|ACB67060.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 584 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 305/575 (53%), Positives = 404/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G +T P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQAQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR+GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRVGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + + W Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 317 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 ++ R R S + S + DI W V + + + W+ +G++ T Sbjct: 318 LRAPSRNGAPSR---------AASARGSSRLGDIVWGTFVILITVYVGWRVVGFVATGVT 368 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 DV +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 MGDVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPALAEKIQPLAQFLAAFPANL 428 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+ Sbjct: 429 LFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQ 488 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T G F Sbjct: 489 WWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDF 548 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 PKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 >gi|254181361|ref|ZP_04887958.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|184211899|gb|EDU08942.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 585 Score = 625 bits (1611), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 406/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ + Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAVAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|296159051|ref|ZP_06841878.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295890612|gb|EFG70403.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 583 Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust. Identities = 311/575 (54%), Positives = 406/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICLIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLVFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTIVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + PL Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIH-------RLLVPLGWMF 309 Query: 314 KKLCRT-LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 K R L + F P Q+ Q+ S + DI W +V + + ++ + Y+ + Sbjct: 310 AKAARVPLRLPAFQGPR--FQIPQMQKSSRVGDIAWAALVLVTTVYVVYRVVMYVRTGVS 367 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 368 LDEVWHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+ Sbjct: 428 LFPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ILPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G + Sbjct: 488 WWRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDY 547 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P++++G+ +M FV NR LW P+Y Y LRL Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|187923127|ref|YP_001894769.1| binding-protein-dependent transporters inner membrane component [Burkholderia phytofirmans PsJN] gi|187714321|gb|ACD15545.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 583 Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust. Identities = 310/575 (53%), Positives = 405/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICVIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + PL Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIH-------RLLVPLGWMF 309 Query: 314 KKLCRT-LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 K R + F P Q+ Q+ S + D+ W +V + + ++ + Y+ + Sbjct: 310 AKAARVPFRLPAFQGPR--FQIPQMQKSSRVGDMVWAALVLLATVYVVYRVVIYVRTGVS 367 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V LG IT+ RVVVLI IAS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 368 LDEVWHVFVLGLITLLRVVVLIAIASVIWVPVGVLIGLRPALAEKIQPIAQFLAAFPANL 427 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+ Sbjct: 428 LFPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR +LPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G + Sbjct: 488 WWRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDY 547 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P++++G+ +M FV NR LW P+Y Y LRL Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|53718680|ref|YP_107666.1| putative ABC transporter membrane protein [Burkholderia pseudomallei K96243] gi|53725139|ref|YP_102518.1| ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67639868|ref|ZP_00438698.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|76811263|ref|YP_332667.1| ABC transporter permease [Burkholderia pseudomallei 1710b] gi|124384265|ref|YP_001028971.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126441907|ref|YP_001058148.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126449210|ref|YP_001081114.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126453617|ref|YP_001065383.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134281122|ref|ZP_01767831.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|166999929|ref|ZP_02265758.1| ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167718626|ref|ZP_02401862.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167737653|ref|ZP_02410427.1| ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167814788|ref|ZP_02446468.1| ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167823241|ref|ZP_02454712.1| ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167851450|ref|ZP_02476958.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167908611|ref|ZP_02495816.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|217420250|ref|ZP_03451756.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|226194385|ref|ZP_03789983.1| ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237811368|ref|YP_002895819.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242315247|ref|ZP_04814263.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254178013|ref|ZP_04884668.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254190761|ref|ZP_04897268.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254199428|ref|ZP_04905794.1| ABC transporter, permease protein [Burkholderia mallei FMH] gi|254205743|ref|ZP_04912095.1| ABC transporter, permease protein [Burkholderia mallei JHU] gi|254258247|ref|ZP_04949301.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254298312|ref|ZP_04965764.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|254357899|ref|ZP_04974172.1| ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|52209094|emb|CAH35035.1| putative ABC transport system, membrane protein [Burkholderia pseudomallei K96243] gi|52428562|gb|AAU49155.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76580716|gb|ABA50191.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|124292285|gb|ABN01554.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126221400|gb|ABN84906.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126227259|gb|ABN90799.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126242080|gb|ABO05173.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134247428|gb|EBA47513.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147749024|gb|EDK56098.1| ABC transporter, permease protein [Burkholderia mallei FMH] gi|147753186|gb|EDK60251.1| ABC transporter, permease protein [Burkholderia mallei JHU] gi|148027026|gb|EDK85047.1| ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|157808237|gb|EDO85407.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157938436|gb|EDO94106.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|160699052|gb|EDP89022.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|217397554|gb|EEC37570.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|225933470|gb|EEH29459.1| ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237506027|gb|ACQ98345.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|238520476|gb|EEP83936.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242138486|gb|EES24888.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|243064050|gb|EES46236.1| ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254216936|gb|EET06320.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 585 Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust. Identities = 311/574 (54%), Positives = 406/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ + Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|330817956|ref|YP_004361661.1| hypothetical protein bgla_1g30970 [Burkholderia gladioli BSR3] gi|327370349|gb|AEA61705.1| hypothetical protein bgla_1g30970 [Burkholderia gladioli BSR3] Length = 584 Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust. Identities = 306/580 (52%), Positives = 401/580 (69%), Gaps = 19/580 (3%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L++ +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIGTLSTQKISLDPANLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V G Sbjct: 77 AAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVAG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGLV Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTTWQRFWKLEVPFSMPGLV 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI ++++ AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTIILPGIGAYLAQAISDKNIGAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + P + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIH-------QLLVPAGWLL 309 Query: 314 KKLCR------TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + R + RF P ++ S DI W +V + W+ + ++ Sbjct: 310 ARAARLPFRLPSFDAARFALPR------VEKQASRAADIGWAILVLIGTAYVVWRVVSFV 363 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 T +V +V LG T+ RV+VLI IAS++W+P+G+WIG RP ++ K QP AQ LAA Sbjct: 364 ATGVTLAEVGHVFLLGLATLLRVLVLIAIASLVWVPIGVWIGLRPALAEKAQPIAQFLAA 423 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F Sbjct: 424 FPANLLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFR 483 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 I GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE+ WG ++ GLGAYI+E T Sbjct: 484 IRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSELVQWGDTKIQAHGLGAYISEMT 543 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G +P++++G+ +M FV NR LW PLY Y LRL Sbjct: 544 AAGDYPKIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRL 583 >gi|323525236|ref|YP_004227389.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] gi|323382238|gb|ADX54329.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] Length = 583 Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust. Identities = 312/575 (54%), Positives = 406/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I II + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAAAITEKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + R + W F + Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAK--AAR 314 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 V L RF P+ Q+ S + DI W +V + + ++ Y+ + Sbjct: 315 VPFRLPALQGPRFPIPQ-------MQKSSRVGDIVWGALVLLGTVYVVYRVFIYVRTGVS 367 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V LG IT+ RVV+LI +AS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 368 LDEVGHVFLLGLITLLRVVLLIALASVIWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+ Sbjct: 428 LFPVFVIVIVRFHLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR +LPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G + Sbjct: 488 WWRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTRVAAHGLGAYIAQSTAAGDY 547 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P++++G+ +M FV NR LW P+Y Y LRL Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|221195992|ref|ZP_03569039.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] gi|221202666|ref|ZP_03575685.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221176600|gb|EEE09028.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221182546|gb|EEE14946.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] Length = 583 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 307/574 (53%), Positives = 398/574 (69%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +ET P + I LD +LP+YA RTTLRML Sbjct: 17 RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKIALDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+GWQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 NMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI EQ+L A+ + ++ M VI Sbjct: 197 RNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ SW+L L R+T + P + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSAGDAPQSWLLDLLRRTRAIH-------QLLVPAGWLL 309 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + R +R F + + + S D W V + + +A + + Y+ T Sbjct: 310 SQAARVPLRVR-AFDAMRAREKAQRSPSRFGDFVWAAAVIVLTLYVASRVVSYVSTGVTI 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 ADVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE +F I GW+W Sbjct: 429 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIAE T G FP Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ + P D +E +++FR+ GWQ + +P P V + + G W Sbjct: 457 WYILFNVIAGATSYPNDYKEATKNFRIRGWQWWRQAMLPGIFPYYVTGAITASGGAWNAS 516 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE + GDT + G+G+YIA D I+ + M + L+++LL+RPM ++ Sbjct: 517 IVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFPKIILGIAVMSLFVTLFNRLLWRPMYAYA 576 Query: 268 -NKFRLE 273 ++ RL+ Sbjct: 577 ESRLRLD 583 >gi|115358889|ref|YP_776027.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|115284177|gb|ABI89693.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] Length = 584 Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust. Identities = 304/575 (52%), Positives = 406/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G +T P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQSQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR+GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRIGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + + W LS Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWL----LSQT 313 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + R + + S + S + DI W V + + +AW+ + ++ T Sbjct: 314 ARIPLRAPSLAGARS-----RAASVRGSSRIGDIVWGTFVILITVYVAWRVVSFVATGVT 368 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 MDEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANL 428 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+ Sbjct: 429 LFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQ 488 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T G F Sbjct: 489 WWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDF 548 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 PKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ + P D +E +++FR+ GWQ + +P P V + + G W Sbjct: 458 WYILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNAS 517 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE + GDT + G+GSYIA D I+ + M + L+++LL+RPM ++ Sbjct: 518 IVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFPKIILGIAVMSLFVTLFNRLLWRPMYAYA 577 Query: 268 -NKFRLE 273 ++ RL+ Sbjct: 578 ESRLRLD 584 >gi|134293957|ref|YP_001117693.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] gi|134137114|gb|ABO58228.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] Length = 584 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 302/575 (52%), Positives = 403/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAVAFPLIIGILAMAIVGFHETMAPIATLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMVASLVFTLGYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L PFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEAPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADKNLAAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQLLFRP++ W++KFR+E T SW+L + R+T+ + + + + W Sbjct: 258 AYDQLLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARVP 317 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 ++ TL R ++ D+ W VV + + +AW+ +G++ T Sbjct: 318 LRAPSVTLARSRGKSSRRSSRVG---------DLVWAAVVIALTLYVAWRVVGFVATGVT 368 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 LAEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANL 428 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+ Sbjct: 429 LFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQ 488 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T G F Sbjct: 489 WWRQAMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDF 548 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 PKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 >gi|167918066|ref|ZP_02505157.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 585 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 309/574 (53%), Positives = 404/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMAAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ + Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ + LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|167900084|ref|ZP_02487485.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167916728|ref|ZP_02503819.1| ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|254196166|ref|ZP_04902590.1| ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|169652909|gb|EDS85602.1| ABC transporter, permease protein [Burkholderia pseudomallei S13] Length = 585 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 310/574 (54%), Positives = 405/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ + Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ + LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|307728994|ref|YP_003906218.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] gi|307583529|gb|ADN56927.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] Length = 583 Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust. Identities = 312/575 (54%), Positives = 406/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I II + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKNQTISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAITEKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + R + W F + Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAK--AAR 314 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 V L RF P Q+ + RV DI W +V + + ++ Y+ + Sbjct: 315 VPLRMPALQGPRFQIP----QIQKSSRVG---DIVWGALVLIGTVYVVYRVFMYVRTGVS 367 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V LG IT+ RVV+LI +AS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 368 LDEVGHVFLLGLITLLRVVLLIALASLIWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + ++LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+ Sbjct: 428 LFPVFVIAIVRFNLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAARNFHIRGWQ 487 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR +LPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G + Sbjct: 488 WWRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVVAHGLGAYIAQSTAAGDY 547 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P++++G+ +M FV NR LW P+Y Y LRL Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582 >gi|170691899|ref|ZP_02883063.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gi|170143183|gb|EDT11347.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 583 Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust. Identities = 311/575 (54%), Positives = 405/575 (70%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I II + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI ++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAIVVKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + R + W F + Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAK--AAR 314 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 V L RF P+ Q+ S + DI W +V + + ++ Y+ + Sbjct: 315 VPFRLPALQAPRFPIPQ-------IQKSSRIGDIVWGALVLVATVYVVYRVFIYVRTGVS 367 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 368 LDEVGHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANL 427 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + ++LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+ Sbjct: 428 LFPVFVIVIVRFNLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQ 487 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ILPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G + Sbjct: 488 WWRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDY 547 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P++++G+ +M FV NR LW P+Y Y LRL Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|121599465|ref|YP_992337.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|121228275|gb|ABM50793.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] Length = 585 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 310/574 (54%), Positives = 405/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +L +YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLLEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ + Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLA-RI 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 317 PLRVPSLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|295675893|ref|YP_003604417.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] gi|295435736|gb|ADG14906.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] Length = 583 Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust. Identities = 310/575 (53%), Positives = 409/575 (71%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICLIAMASIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ ++PG+V+G Sbjct: 77 AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLAMFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + R + W F + Sbjct: 257 AYDQLLFRPLVAWADKFRMEFTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAR--AAR 314 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 V+ RFH P+ +++ S + DI W +V + + ++ Y+ T Sbjct: 315 VRFQLPAFSAPRFHIPQ-------SEKNSKLGDIIWAAIVLLATVYVVYRVFLYVRTGVT 367 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 ++ +V LG +T+ RVVVLI IAS+IW+PVG+ IG RP ++ K+QP AQ LAAFPAN+ Sbjct: 368 LDEIGHVFLLGLVTLLRVVVLIAIASVIWVPVGVLIGLRPALAEKVQPLAQFLAAFPANL 427 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGAS++PND++E A +FHI GW+ Sbjct: 428 LFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGASSYPNDYREAAKNFHIRGWQ 487 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR +LPGIFPYYVTGAITA GGAWNASIV+E WG L GLGAYIA++T G + Sbjct: 488 WWRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTRLAAHGLGAYIAQTTAAGDY 547 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P++++G+ +M FV NR LW P+Y Y LRL Sbjct: 548 PKIIVGIAVMSLFVTLFNRLLWRPMYAYAEGKLRL 582 >gi|327396383|dbj|BAK13805.1| glycine betaine/L-proline transport system permease protein ProW [Pantoea ananatis AJ13355] Length = 578 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 301/575 (52%), Positives = 406/575 (70%), Gaps = 9/575 (1%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +RR+ PN++D +AF L+I +I ++ G +T +P D + I+LD +LP+YA RTTLR Sbjct: 11 NRRLLPNVWDAVAFPLIICLIAMVAVGFHQTLMPIDSLKTQAISLDPTNLPEYAMRTTLR 70 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML AM+ SL+F+ +Y TLAAKSRR VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V Sbjct: 71 MLVAMLASLVFSLIYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFIALFPGQV 130 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G ELAAIFA+FTSQ WNMTFS YQSL +P DL EVSR F L+GWQ+FW L PF++PG Sbjct: 131 LGVELAAIFALFTSQAWNMTFSFYQSLRTVPADLVEVSRGFHLTGWQRFWKLDAPFAVPG 190 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 LVWNMMMSMSGGWFF+VASE I VG+ LPG+G Y+A AI +D+ A+ + +LTM+ V Sbjct: 191 LVWNMMMSMSGGWFFIVASEAITVGNNTFTLPGVGGYLAQAILHKDIHAVGWVLLTMVIV 250 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I YDQLLFRP++ W++KFR+E T SWV L R+T + I ++ Sbjct: 251 ILAYDQLLFRPLVAWADKFRMENTRSGNAPTSWVRDLMRRTRLIHQI-FTPLRLLLSALA 309 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + T +RF EN + +R S + DI W V + + + ++ I Y+ Sbjct: 310 RISWRWPTAAPVRF---EN-----NTRRASRLGDIVWGAFVILLTLYVVYRVITYVQIGV 361 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T +V +V LG IT+ RV VLI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN Sbjct: 362 TLDEVKHVFTLGLITLLRVTVLILISSLIWVPLGVMIGLRPALAGKIQPVAQFLAAFPAN 421 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP+ V + ++HLNP++WLS L++ GTQWYILFNV+AG +AFPND+KE A++FHI GW Sbjct: 422 LMFPVFVIMIVHFHLNPDIWLSPLIVLGTQWYILFNVVAGTTAFPNDYKEAAANFHIRGW 481 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +WWR ++LPGIFPYY+TGAITA GGAWNASIVSE WG+ + GLGAYIA++T G Sbjct: 482 QWWRQVMLPGIFPYYITGAITASGGAWNASIVSEFVQWGNTQVTAHGLGAYIAQTTAAGD 541 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 FP+++LG+ +M FV NR LW PLY+Y R Sbjct: 542 FPKIILGIAVMSLFVTLFNRLLWRPLYVYAESKFR 576 >gi|288961668|ref|YP_003451978.1| binding-protein-dependent transport systems inner membrane component [Azospirillum sp. B510] gi|288913948|dbj|BAI75434.1| binding-protein-dependent transport systems inner membrane component [Azospirillum sp. B510] Length = 586 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 301/582 (51%), Positives = 407/582 (69%), Gaps = 24/582 (4%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++A LVIG++ +L G + +P ++ VPITLD LP+YA R+TLRML+AM Sbjct: 17 PNRWDVVALPLVIGLLALLAIGGHQMALPLGSIEEVPITLDPWMLPEYALRSTLRMLAAM 76 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLFTF YATLAAKSRR GM+L+P+LD++QS+P+LG+++FTVV+F++L+PG V+GAE Sbjct: 77 AASLLFTFTYATLAAKSRRAGMLLIPVLDVLQSVPVLGYISFTVVFFLSLFPGSVLGAEC 136 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS YQSL +PRDL+E + F SGWQ+FW L P++ PGLVWNM Sbjct: 137 AAIFAIFTSQAWNMAFSFYQSLRTVPRDLDEAATGFGFSGWQRFWTLEAPYAAPGLVWNM 196 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VGD I LPGIGSY+A AI Q L A+ +A+L ML VI YD Sbjct: 197 MMSMSGGWFFVVASEAITVGDKTITLPGIGSYLAKAIDGQRLDAVGWAVLAMLLVILAYD 256 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR+E T +SW+L LF++T F R I F+P + + +L Sbjct: 257 QLLFRPLVAWADKFRVELTGAQEVPESWLLTLFQRTRFFRAI-------FAPFDSLLGRL 309 Query: 317 CRTLGVIRFHFPENFLQLCS-----------NQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 I P L + ++ + +D+ W+ ++ + W + Sbjct: 310 ------IWLRLPTGGLGRGAAGGLRSVGGLLDRVPARAVDMGWYLLLAVTGLWAGWSMVV 363 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 +I + + DV V+ LG T+ RV+VLI +A+++W+P+G+ IG RP ++ K+QP AQ L Sbjct: 364 FIASGVAWGDVGTVLLLGGATLLRVLVLIALATLVWVPLGVLIGLRPRLAEKVQPVAQFL 423 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AAFPAN+ FP+ V + + LNP++WLS LMI GTQWYILFNV+AGA+AFP+D KE A++ Sbjct: 424 AAFPANLLFPVAVVVIVRFDLNPDIWLSPLMILGTQWYILFNVVAGATAFPSDLKEAAAN 483 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 F I GW+WWR ++LPG+FPYYVTGA+TA GG+WNASIV+E +WG L GLG+YIA+ Sbjct: 484 FRIRGWQWWRDVMLPGVFPYYVTGAVTASGGSWNASIVAEAVNWGDTQLTAHGLGSYIAQ 543 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +T G +P +VLG+ +M FV+ NR LW PLY + R LRL Sbjct: 544 ATTAGDYPRIVLGIAVMSLFVILFNRLLWRPLYAFAERRLRL 585 >gi|291616142|ref|YP_003518884.1| ProW [Pantoea ananatis LMG 20103] gi|291151172|gb|ADD75756.1| ProW [Pantoea ananatis LMG 20103] Length = 578 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 301/575 (52%), Positives = 406/575 (70%), Gaps = 9/575 (1%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +RR+ PN++D +AF L+I +I ++ G +T +P D + I+LD +LP+YA RTTLR Sbjct: 11 NRRLLPNVWDAVAFPLIICLIAMVAVGFHQTLMPIDSLKTQAISLDPTNLPEYAMRTTLR 70 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML AM+ SL+F+ +Y TLAAKSRR VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V Sbjct: 71 MLVAMLASLVFSLIYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFIALFPGQV 130 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G ELAAIFA+FTSQ WNMTFS YQSL +P DL EVSR F L+GWQ+FW L PF++PG Sbjct: 131 LGVELAAIFALFTSQAWNMTFSFYQSLRTVPADLVEVSRGFHLTGWQRFWKLDAPFAVPG 190 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 LVWNMMMSMSGGWFF+VASE I VG+ LPG+G Y+A AI +D+ A+ + +LTM+ V Sbjct: 191 LVWNMMMSMSGGWFFIVASEAITVGNNTFTLPGVGGYLAQAILHKDIHAVGWVLLTMVIV 250 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I YDQLLFRP++ W++KFR+E T SWV L R+T + I ++ Sbjct: 251 ILAYDQLLFRPLVAWADKFRMENTRSGNAPTSWVRDLMRRTRLIHQI-FTPLRLLLSALA 309 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + T +RF EN + +R S + DI W V + + + ++ I Y+ Sbjct: 310 RISWRWPTAAPVRF---EN-----NTRRASRLGDIVWGAFVILLTLYVVYRVITYVQIGV 361 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T +V +V LG IT+ RV VLI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN Sbjct: 362 TLNEVKHVFTLGLITLLRVTVLILISSLIWVPLGVMIGLRPALAGKIQPVAQFLAAFPAN 421 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP+ V + ++HLNP++WLS L++ GTQWYILFNV+AG +AFPND+KE A++FHI GW Sbjct: 422 LMFPVFVIMIVHFHLNPDIWLSPLIVLGTQWYILFNVVAGTTAFPNDYKEAAANFHIRGW 481 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +WWR ++LPGIFPYY+TGAITA GGAWNASIVSE WG+ + GLGAYIA++T G Sbjct: 482 QWWRQVMLPGIFPYYITGAITASGGAWNASIVSEFVQWGNTQVTAHGLGAYIAQTTAAGD 541 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 FP+++LG+ +M FV NR LW PLY+Y R Sbjct: 542 FPKIILGIAVMSLFVTLFNRLLWRPLYVYAESKFR 576 >gi|241761115|ref|ZP_04759204.1| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374734|gb|EER64195.1| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 584 Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust. Identities = 306/580 (52%), Positives = 402/580 (69%), Gaps = 13/580 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P F I PNI+DL+AF L+ G I +++HG + + +++ PI+L + LP+YA R Sbjct: 15 PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+ Sbjct: 75 TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L PF Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++ AI A+L Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ +I LY+QLLFRP++ W+ KF++E++T +SWV + R T ++ Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSTSKEKVNSWVYDIIRHTRLIK----------- 303 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGY 366 LS + + L +IRF EN + ++ S + D W FCV+ + G W + Y Sbjct: 304 RLSTPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGFCVLSAILWG-GWVTFDY 362 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + ++QDV G +T+ RV VLI++AS++W+PVGIWIG RP ++ IQP AQ LA Sbjct: 363 LRQALSWQDVWISFSCGLMTLLRVAVLIMLASLLWVPVGIWIGLRPSLAQHIQPIAQFLA 422 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPANV FP VV + NPN+WLS LMI GTQWYILFNVIAGA++FP D KE + + Sbjct: 423 AFPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVY 482 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 I W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+ L GLGAYIA + Sbjct: 483 QIRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANA 542 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 T G VVLG+++M FV NR LW PLY + R +R Sbjct: 543 TTAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582 >gi|311279626|ref|YP_003941857.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] gi|308748821|gb|ADO48573.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] Length = 608 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 301/578 (52%), Positives = 404/578 (69%), Gaps = 14/578 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R + PN +D++AF L+I +I +++ G +T +P + I+LD +LP+YA RTTLRM Sbjct: 41 RHLKPNRWDIVAFPLIICLIAMMVTGFNQTMMPIVSLKTQTISLDPANLPEYALRTTLRM 100 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L AM+ +LLFT VY TLAA+SRR +L+PILDI+QS+P+LG+++FTV +F+ L+PG+V+ Sbjct: 101 LVAMIAALLFTLVYGTLAARSRRAEKILIPILDILQSVPVLGYISFTVTFFIALFPGRVL 160 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G ELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPF+MPGL Sbjct: 161 GVELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLVEVSRGFHLTPWQRFWKLDVPFAMPGL 220 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFF+VASE I VG+ LPGIG+Y+A AI +++ AI + +L M VI Sbjct: 221 IWNMMMSMSGGWFFIVASEAITVGNNTFTLPGIGAYLAQAILSKNMHAIGWVLLAMTLVI 280 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 YDQLLFRP++ W++KFR+E T SWVL L R+T + SP Sbjct: 281 LAYDQLLFRPLVAWADKFRMENTRSGSAPTSWVLNLIRRTRLIH-------RLLSPFGFL 333 Query: 313 VKKLCRTLGVIRFHFPENFLQLC---SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + + R I H P S +R+S ++DI W +V +A+ +AW+ I Y+ Sbjct: 334 LSGMAR----IPLHVPLPHWGAASPRSARRLSRVVDILWGTLVILLALYVAWRVISYVSA 389 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +V +V LG T+ RV VLI+I+S++W+P+G+ IG RP ++ KIQP AQ LAAFP Sbjct: 390 GVSLSEVGHVFLLGFATLLRVSVLILISSLVWVPLGVMIGMRPALAGKIQPIAQFLAAFP 449 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 AN+ FP+ V + ++ LNPN+WLS L++ GTQWYILFNV+AG SA PND++E A++FHI Sbjct: 450 ANLLFPIFVITIVHFQLNPNIWLSPLIVLGTQWYILFNVVAGTSAIPNDYREAAANFHIR 509 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 GW+WWR ++LPGIFPYY+TGAITA GGAWNASIV+E WG L G+GAYIA++T Sbjct: 510 GWQWWREVMLPGIFPYYITGAITASGGAWNASIVAEFVQWGDTQLTAYGIGAYIAKTTAA 569 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G FP+++LGV +M FV NR LW PLY Y R+ Sbjct: 570 GDFPKIILGVAVMSLFVTLFNRLLWRPLYAYAESRFRI 607 >gi|114326819|ref|YP_743976.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114314993|gb|ABI61053.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 574 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 315/584 (53%), Positives = 408/584 (69%), Gaps = 18/584 (3%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 + P SRR PN+FDL++ +V + ++H + T VP D ++LD +LP Y Sbjct: 4 TVFPALASRRRLPNLFDLVSIAVVFAALVAVVHVTRGTLVPLDDRYAHAVSLDPWNLPAY 63 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RTTLRML A+ +L FTF YAT AAKSRR M+L+P+LDI+QS+PILGFLTFTVV+FM Sbjct: 64 AFRTTLRMLLALAAALFFTFTYATWAAKSRRAAMLLIPMLDILQSVPILGFLTFTVVFFM 123 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 NL+PG+V+GAELA+IFAIFTSQ WNM FS YQSL +P DL E +R+FRLS WQ+FW L Sbjct: 124 NLFPGQVLGAELASIFAIFTSQAWNMAFSFYQSLTTLPGDLVEATRAFRLSPWQRFWKLE 183 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VPF+MPGLVWN MMSMSGGWFFVVASE + VGD LPGIGSY+ALA+++QD+ AI YA Sbjct: 184 VPFAMPGLVWNAMMSMSGGWFFVVASEAVSVGDNTWMLPGIGSYVALALRQQDMAAIGYA 243 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF---IGYS 301 +L M VI LYDQLLFRP++ WS KFR E T G + W+L L R+T +LR + S Sbjct: 244 ILAMAVVILLYDQLLFRPLVAWSEKFRFETTQGSTSEEPWLLRLLRRTAWLRAGSELLAS 303 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 +N F+ L I F P L SNQ S ++D+ W +V + + AW Sbjct: 304 GFNAFTNLR------------IGFRLPR--LIRASNQP-SRIVDMLWGLIVFAMLVWCAW 348 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 ++ DVL + +GCITM RV+VL+I+A++IW+P+G+ IG RPH++ +QP Sbjct: 349 HIYAFLSGRIAPSDVLQAVLMGCITMLRVIVLMIVATLIWVPIGVAIGLRPHVARFVQPL 408 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 Q LAAFPAN+FFPL V ++ + LNP++WL+ LMI G QWYI+FNVIAGA+AFP D +E Sbjct: 409 VQFLAAFPANLFFPLFVLVIARFSLNPDIWLTPLMILGAQWYIMFNVIAGAAAFPGDMQE 468 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A FHI G+ WWR +ILPGIFPYY+TGAITA GGAWNA+IVSEV +WG L+ GLG Sbjct: 469 AARGFHIRGFLWWRRVILPGIFPYYITGAITASGGAWNAAIVSEVVTWGPNTLQAHGLGR 528 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 +IA+++ G++P +LGV +M FV+ NR LW PL+ + TR L Sbjct: 529 FIADASADGNWPRTILGVAVMSAFVVGFNRALWKPLFNFATRRL 572 >gi|206563802|ref|YP_002234565.1| ABC transporter permease [Burkholderia cenocepacia J2315] gi|198039842|emb|CAR55817.1| ABC transporter, permease protein [Burkholderia cenocepacia J2315] Length = 584 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 302/577 (52%), Positives = 404/577 (70%), Gaps = 14/577 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAVAFPLIICVLAMAIVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAIADKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + P + Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIH-------QLLVPAGWLL 310 Query: 314 KKLCRTLGVIRFHFPE---NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 + R I P ++ S++R S + DI W V + + + W+ + ++ Sbjct: 311 SQAAR----IPLRVPSLAGTRVRGASSRRSSRIGDIVWGAFVIALTLYVVWRVVSFVATG 366 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 T +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPA Sbjct: 367 VTMGEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPA 426 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I G Sbjct: 427 NLLFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRG 486 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W+WWR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T G Sbjct: 487 WQWWRQAMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAG 546 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 547 DFPKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 >gi|78061821|ref|YP_371729.1| ABC anion transporter, fused inner membrane subunits [Burkholderia sp. 383] gi|77969706|gb|ABB11085.1| ABC anion transporter, fused inner membrane subunits [Burkholderia sp. 383] Length = 583 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 304/577 (52%), Positives = 403/577 (69%), Gaps = 14/577 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +T P ++ I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + P + Sbjct: 257 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIH-------QLLVPAGWLL 309 Query: 314 KKLCRTLGVIRFHFPE---NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 + R I FP + S++ S + DI W V + + + W+ + ++ Sbjct: 310 SQAAR----IPLRFPSMKGTRARGASSRSSSRIGDIVWGTFVILLTVYVVWRVVTFVATG 365 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 T +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPA Sbjct: 366 VTMGEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPALAEKIQPLAQFLAAFPA 425 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I G Sbjct: 426 NLLFPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRG 485 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G Sbjct: 486 WQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTAAG 545 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 546 DFPKIILGIAVMSLFVTLFNRVLWRPMYAYAESRLRL 582 >gi|283856284|ref|YP_162306.2| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis ZM4] gi|283775280|gb|AAV89195.2| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis ZM4] Length = 584 Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust. Identities = 305/580 (52%), Positives = 401/580 (69%), Gaps = 13/580 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P F I PNI+DL+AF L+ G I +++HG + + +++ PI+L + LP+YA R Sbjct: 15 PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+ Sbjct: 75 TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L PF Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++ AI A+L Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ +I LY+QLLFRP++ W+ KF++E++ +SWV + R T ++ Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSASKEKVNSWVYDIIRHTRLIK----------- 303 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGY 366 LS + + L +IRF EN + ++ S + D W FCV+ + G W + Y Sbjct: 304 RLSAPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGFCVLSAILWG-GWVTFDY 362 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + ++QDV G +T+ RV VLI++AS++W+PVGIWIG RP ++ IQP AQ LA Sbjct: 363 LRQALSWQDVWISFSCGLMTLLRVAVLILLASLLWVPVGIWIGLRPSLAQHIQPIAQFLA 422 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPANV FP VV + NPN+WLS LMI GTQWYILFNVIAGA++FP D KE + + Sbjct: 423 AFPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVY 482 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 I W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+ L GLGAYIA + Sbjct: 483 QIRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANA 542 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 T G VVLG+++M FV NR LW PLY + R +R Sbjct: 543 TTAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582 >gi|260752921|ref|YP_003225814.1| binding-protein-dependent transporters inner membrane component [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552284|gb|ACV75230.1| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 584 Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust. Identities = 305/580 (52%), Positives = 401/580 (69%), Gaps = 13/580 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P F I PNI+DL+AF L+ G I +++HG + + +++ PI+L + LP+YA R Sbjct: 15 PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+ Sbjct: 75 TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L PF Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++ AI A+L Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ +I LY+QLLFRP++ W+ KF++E++T +SWV + R T ++ Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSTSKEKVNSWVYDIIRHTRLIK----------- 303 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGY 366 LS + + L +IRF EN + ++ S + D W CV+ + G W + Y Sbjct: 304 RLSAPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGLCVLSAILWG-GWVTFDY 362 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + ++QDV G +T+ RV VLI++AS++W+PVGIWIG RP ++ IQP AQ LA Sbjct: 363 LRQALSWQDVWISFSCGLMTLLRVAVLILLASLLWVPVGIWIGLRPSLAQHIQPIAQFLA 422 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPANV FP VV + NPN+WLS LMI GTQWYILFNVIAGA++FP D KE + + Sbjct: 423 AFPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVY 482 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 I W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+ L GLGAYIA + Sbjct: 483 QIRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANA 542 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 T G VVLG+++M FV NR LW PLY + R +R Sbjct: 543 TTAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582 >gi|222081809|ref|YP_002541174.1| sugar ABC transporter [Agrobacterium radiobacter K84] gi|221726488|gb|ACM29577.1| sugar ABC transporter [Agrobacterium radiobacter K84] Length = 586 Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust. Identities = 305/575 (53%), Positives = 397/575 (69%), Gaps = 11/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 RI PN +DL+AF V + + +HG E P D + PI+LD LP+YA RTTLRM Sbjct: 21 RILPNGYDLVAFAFVAALAVLAVHGAAEMRAPLDGLANAPISLDPARLPEYALRTTLRMF 80 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A+ SL+FTFV+ATLAAKSRR M+++P LDI+QS+P+LGFLTFTV +FM ++PG +G Sbjct: 81 AAIGASLVFTFVFATLAAKSRRAEMIIIPALDILQSVPVLGFLTFTVTFFMGIFPGSQLG 140 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AE A++FAIFTSQ WNM FS YQSL +PRDL+EVSR F LS WQ+FW L PFS PGL+ Sbjct: 141 AECASVFAIFTSQAWNMAFSFYQSLRTVPRDLDEVSRGFGLSAWQRFWRLEAPFSAPGLI 200 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMSMSGGWFFVVASE I VG+T + LPG+GS++A+AI +QD A+ +A+L M VI Sbjct: 201 WNTMMSMSGGWFFVVASEAITVGNTTVQLPGLGSWLAVAIDKQDFAAVSWAVLAMGVVIV 260 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-FIGYSSWNFFSPLSNN 312 LYDQLLFRP++ W++KFR E+T G SWV L ++T L+ +G +W + S + Sbjct: 261 LYDQLLFRPIVAWADKFRFEQTAGQEKPRSWVYSLIQRTRLLKCLMGPLAWAWGSLMLVR 320 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + + R V+R + N + MLD WF ++ G+ I W + ++ T Sbjct: 321 LPAMPRKAPVVRHN----------NAVATRMLDYAWFVLIAGIGIWGIWTAFAFVSQTLT 370 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + D G +T+ RV+VLI +AS+IW+P+G+WIG RP ++ ++QP AQ LAAFPANV Sbjct: 371 WSDAWEAFSGGLVTLLRVLVLIAVASVIWVPIGVWIGLRPAVAERVQPVAQFLAAFPANV 430 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V + +PN+WLS LM+ GTQWYILFNVIAGASAFP D KE S + + W Sbjct: 431 LFPFAVIAIVATGASPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEACSVYQLRSWT 490 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ILPGIFPYYVTGA+TA GG+WNASIV+EV SWGH L GLG+YIA++TE G + Sbjct: 491 WWRRAILPGIFPYYVTGALTASGGSWNASIVAEVVSWGHTKLEAFGLGSYIAKATEAGDY 550 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 V+LG+ +M FV LNR LW PLY++ R LRL Sbjct: 551 QRVILGIAVMSLFVTLLNRTLWRPLYVFAERRLRL 585 >gi|312115324|ref|YP_004012920.1| binding-protein-dependent transporters inner membrane component [Rhodomicrobium vannielii ATCC 17100] gi|311220453|gb|ADP71821.1| binding-protein-dependent transport systems inner membrane component [Rhodomicrobium vannielii ATCC 17100] Length = 583 Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust. Identities = 305/574 (53%), Positives = 391/574 (68%), Gaps = 11/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 + +PN +D++ F+ + ++ + HG + P + P++LD +LPQYA TTLRM Sbjct: 21 QAWPNRYDVVVFLALGAVLVAMAHGAKTMQQPLTGLAANPVSLDPANLPQYALLTTLRMF 80 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A+ SLLFTF+ A LAAKSR+ V++P LDI+QS+P+LGFLTFTVV+F+NL+PG IG Sbjct: 81 AALGFSLLFTFIVAPLAAKSRKAERVIIPALDILQSVPVLGFLTFTVVFFLNLFPGSQIG 140 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDLEEV+ FRL+ WQ+FW L VPF+ PGLV Sbjct: 141 AELAAIFAIFTSQAWNMTFSFYQSLKTVPRDLEEVTEQFRLTPWQRFWKLEVPFATPGLV 200 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VGDT I LPGIGSYIALAI+++++ A+ +A+ M VI Sbjct: 201 WNMMMSMSGGWFFVVASEAISVGDTTITLPGIGSYIALAIEQKNIGAVAWAVGAMGVVIV 260 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 LYDQLLFRP++ WS+KFR+E P +SWVL L R+T ++ + V Sbjct: 261 LYDQLLFRPIVAWSDKFRVELVASQNPPESWVLNLLRRTRLIQAVNGLLGRIAGLFGGGV 320 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R H PE + + + + + +I VV A I Y+ + Sbjct: 321 STLSR-------HAPEPRIGKTAGRALDILFNIVLAAVVVWAAWSI----YSYVRATLGW 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV+ + GCIT RV+VLI IAS+IW+PVG++IG RP ++ +IQP AQ LAAFPANV Sbjct: 370 SDVVQAVTDGCITFVRVMVLIAIASLIWVPVGVYIGLRPKLAERIQPLAQFLAAFPANVL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP VV + + L+PN+WLS L+I GTQWYILFNVIAGAS FP D E + + + GW W Sbjct: 430 FPFVVMGIVAWKLDPNIWLSPLIILGTQWYILFNVIAGASVFPRDLGEASELYRLKGWLW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ++LP I PYYVTGA+TA GG+WNASIV+E SWG + GLGAYIA++T G F Sbjct: 490 WRKVMLPSILPYYVTGALTASGGSWNASIVAEAVSWGDTKVEAQGLGAYIADATAAGDFH 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 VVLGV +M FV+ALNR LW LY Y R LR+ Sbjct: 550 RVVLGVGVMSVFVVALNRVLWRRLYAYADRRLRI 583 >gi|186476907|ref|YP_001858377.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184193366|gb|ACC71331.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 584 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 309/575 (53%), Positives = 402/575 (69%), Gaps = 10/575 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + PI+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPISTLQNAPISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G VLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRAGQVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVS+ F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSKGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPG+GSY+A AI E++L AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGMGSYLAQAIAEKNLHAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNN 312 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + R + W F + Sbjct: 258 AYDQFLFRPLVAWTDKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPIGWMFAK--AAR 315 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 V +G +RF P + S DI W +V V + ++ + Y+ T Sbjct: 316 VPIRWPRVGPVRFAKP-------VEHKPSKTGDIVWSVIVMLVTAFVVYRVVAYVRTGVT 368 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V LG +T+ RV +LI +AS++W+PVG+ IG RP ++ K+QP AQ LAAFPAN+ Sbjct: 369 LDEVGHVFVLGLLTLLRVTLLIALASVVWLPVGVLIGLRPALAEKVQPLAQFLAAFPANL 428 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V + + LNP++WLS L++ GTQWYILFNVIAGASA+PND+KE A +F I GW+ Sbjct: 429 LFPAFVLVIVRFDLNPDIWLSPLIVLGTQWYILFNVIAGASAYPNDYKEAAKNFRIRGWQ 488 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR +LPG+FPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ T G + Sbjct: 489 WWRQAMLPGVFPYYVTGAITASGGAWNASIVAEAVQWGDTKVAAHGLGAYIAQYTAAGDY 548 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P+++LG+ +M FV NR LW PLY Y LRL Sbjct: 549 PKIILGIAVMSLFVSLFNRVLWRPLYAYAESRLRL 583 >gi|188591808|ref|YP_001796407.1| putative Binding-protein-dependent transporter, inner membrane component [Cupriavidus taiwanensis] gi|170939203|emb|CAP64246.1| putative Binding-protein-dependent transporter, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 578 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 309/579 (53%), Positives = 407/579 (70%), Gaps = 11/579 (1%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P +RR+ PN +D +A L+IG++ + GI+ET P I+LD LP+YA RT Sbjct: 10 PGTARRLLPNRWDFIALPLIIGLLVVAASGIRETLAPLAGPSAEAISLDPAMLPEYALRT 69 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TLRML+A+ SLLFTF Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTVV+F+ L+P Sbjct: 70 TLRMLAALAASLLFTFTYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVVFFLALFP 129 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G+++GAELAAIFAIFTSQ WNMTFS YQSL +P DL EVS S RL+ WQKFW L VPF+ Sbjct: 130 GRMLGAELAAIFAIFTSQAWNMTFSFYQSLRTLPPDLIEVSNSMRLTPWQKFWKLEVPFA 189 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 MPGL+WNMMMSMSGGWFFVVASE I VGD I LPG+G+++A AI + ++ A+ + +L M Sbjct: 190 MPGLIWNMMMSMSGGWFFVVASEAITVGDKSITLPGVGAFLATAIADSNMAAVGWVILAM 249 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 + VI LYDQ LFRPM+ W+++FRLE T+ SWVL L +T+ ++ Sbjct: 250 IAVIVLYDQFLFRPMVAWADRFRLESTSAQTAPQSWVLNLVHRTHLIQ-----------S 298 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 L +L R L RF ++ ++D+ W +V +A + W+++ Y+ Sbjct: 299 LLRTFGRLLRKLARARFAVQLPAASGPQRAGLARVVDVVWSLLVAVLAGYLLWRTVSYVH 358 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 +V+ VI LG +T+ RV+VLI++ S+IW+PVG+ IG RP ++ KIQP AQ LAAF Sbjct: 359 TEAGLDEVVKVIGLGLLTLLRVLVLIVLTSLIWVPVGVMIGLRPRLAEKIQPLAQFLAAF 418 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PAN+ FP+ V + ++HLNP++WLS L++ G QWYILFNVIAGA+AFPNDF+E A++F I Sbjct: 419 PANLLFPVFVFGIVHFHLNPDIWLSPLIVLGVQWYILFNVIAGATAFPNDFREAATNFRI 478 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 GW+WWR I+LPGIFPYYVTGAITA GGAWNASIVSE SWG L GLGAYIA+ST Sbjct: 479 RGWQWWRQIMLPGIFPYYVTGAITASGGAWNASIVSEAVSWGSTSLSAHGLGAYIAQSTA 538 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G +P++VLG+ +M V+ NRFLW PLY LR+ Sbjct: 539 AGDYPKIVLGIAVMSIMVVCFNRFLWRPLYAIAESKLRM 577 >gi|217976878|ref|YP_002361025.1| binding-protein-dependent transport systems inner membrane component [Methylocella silvestris BL2] gi|217502254|gb|ACK49663.1| binding-protein-dependent transport systems inner membrane component [Methylocella silvestris BL2] Length = 578 Score = 595 bits (1533), Expect = e-168, Method: Compositional matrix adjust. Identities = 290/577 (50%), Positives = 393/577 (68%), Gaps = 10/577 (1%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 + R+ PN +DLL L+ + H T+P + +LD LP YA RTTL Sbjct: 11 LGRKALPNQYDLLGLGLIFSAFIAIAHFSHGLTLPIAAPNSTVTSLDYAGLPYYAMRTTL 70 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM +AM SLLFTF YATLAAKSRR +VL+P+LDI+QS+PILGFL+FTV +F+ L+PG Sbjct: 71 RMFAAMAASLLFTFTYATLAAKSRRAELVLIPLLDILQSVPILGFLSFTVTFFLGLFPGS 130 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIFAIFTSQ WNM FS YQSL ++PRDL EV+ F+LSGWQ+FW L PF+MP Sbjct: 131 ILGVECAAIFAIFTSQAWNMAFSFYQSLRSVPRDLVEVASGFQLSGWQRFWQLEAPFAMP 190 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 GL+WNMMMSMSGGWFFVVASE I VGDT I LPG+GSY+ALAI+++ + A+ A++TM Sbjct: 191 GLIWNMMMSMSGGWFFVVASEAISVGDTTIKLPGVGSYLALAIEQKRIDAVFAAVVTMAI 250 Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310 VI YDQLLFRP++ + ++FR+E + G + S+V LF +T++LR + + F + Sbjct: 251 VILAYDQLLFRPLVAFGSRFRVELSAGQSQSRSFVRDLFLRTHWLRALTRPPSDLFQSFA 310 Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 +L R+ + + + +S ++DI WF + + W+ + Y+ Sbjct: 311 LWRLELRRS----------HKFKPAPDPALSRLVDILWFVAIAAMIAWSGWRIVDYVSTE 360 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 T+ D+ + T+ RVVVL+ +A+I+W+PVG+WIG RP ++ KIQP AQ LAAFPA Sbjct: 361 LTFADLGQAVEYTLFTLIRVVVLLALATIVWVPVGVWIGLRPALADKIQPLAQFLAAFPA 420 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 NV FP+ V + + LNP++WLS L++FGTQWYILFNVIAGA+AFPND KE + F I G Sbjct: 421 NVIFPIAVVLILRFSLNPDIWLSPLIVFGTQWYILFNVIAGAAAFPNDLKEAVAGFRIHG 480 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 WW+ +++P IFP+YVTGA+TA GG+WNA+IV+E WG + G+GAYIAE+TEKG Sbjct: 481 LDWWKSVMIPAIFPFYVTGALTASGGSWNAAIVAEYVRWGDTVVAAHGIGAYIAEATEKG 540 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P++VLGV +M V+ NR W PL+ R LRL Sbjct: 541 DYPKIVLGVAVMAAVVILFNRLFWRPLFGLAERRLRL 577 >gi|271499902|ref|YP_003332927.1| binding-protein-dependent transporter inner membrane component [Dickeya dadantii Ech586] gi|270343457|gb|ACZ76222.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech586] Length = 584 Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust. Identities = 298/569 (52%), Positives = 394/569 (69%), Gaps = 15/569 (2%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D+L F L+ ++ ++++G+++ ++P I+D P+ LD+ LP+YA RTTLRM A+ +SL Sbjct: 28 DILFFTLLALVVALVVYGMEQMSLPLSILDASPVRLDIALLPEYALRTTLRMFVALAVSL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 LFT V ATLAAKSR+ MV++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 LFTLVIATLAAKSRKAEMVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WNM FS +QSL +P DL EVS+ F S W++F L +PF++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNMAFSFFQSLRTLPGDLSEVSQQFGFSPWRRFIRLELPFAIPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVASE I VG+T + LPGIGS++ALAI +++L AI +A++ M VI LYDQLLF Sbjct: 208 SGGWFFVVASEAITVGNTTVSLPGIGSWLALAIAQENLTAIAWAVVAMTVVIVLYDQLLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF-LRFIGYSSWNFFSPLSNNVKKLCRT 319 RP++ W++KFR E+T SWV L R+T+ I SW F+ T Sbjct: 268 RPVVAWADKFRFEQTASQKRPRSWVYDLVRRTHISTAIINVLSWPFY------------T 315 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFC-VVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L +R+ FL+ + R + + D W V+ GV G+ Q + YI DV+ Sbjct: 316 LAALRWPSVPRFLRHTPSPRYNKITDRLWLALVIIGVLAGVV-QLVQYIGASLGMADVIA 374 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V +G T+ RVVVLI +AS+IW+P+G+WIG +P ++ ++QP AQ LAAFPANV FP V Sbjct: 375 VFGMGLATLARVVVLIALASVIWVPIGVWIGLQPSVAERLQPLAQFLAAFPANVLFPFAV 434 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ ++LNP++WLS LM+ GTQWYILFNVIAG +A P D E A + I W+WWR + Sbjct: 435 ILIAGFNLNPDIWLSPLMVLGTQWYILFNVIAGTAALPTDLLEAARIYGIRRWQWWRQVA 494 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPGIFPYYVTGA+TA GG+WNASIVSE SWG HL TGLGAYIA +T F +V LG Sbjct: 495 LPGIFPYYVTGALTASGGSWNASIVSESISWGKQHLEATGLGAYIANATTAADFHQVALG 554 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + +M FV+A NR LW PLY + R LRL Sbjct: 555 IAVMSVFVIAFNRLLWRPLYQFAERRLRL 583 >gi|307130273|ref|YP_003882289.1| ABC transporter nitrate permease [Dickeya dadantii 3937] gi|306527802|gb|ADM97732.1| ABC transporter nitrate permease [Dickeya dadantii 3937] Length = 593 Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust. Identities = 297/568 (52%), Positives = 392/568 (69%), Gaps = 13/568 (2%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D+L F L+ + ++++G+++ ++P I+D P+ LD+ LP+YA RTTLRM A+ +SL Sbjct: 37 DMLFFTLLALLAALVVYGMEQMSLPLSILDASPVRLDIALLPEYALRTTLRMFVALGVSL 96 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 LFT V ATLAAKSR+ MV++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 97 LFTLVIATLAAKSRKAEMVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIF 156 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WNM FS +QSL +P DL EVS+ F S W++F L +PF+ PGLVWNMMMSM Sbjct: 157 AIFTSQAWNMAFSFFQSLRTLPGDLSEVSQQFGFSPWRRFIRLELPFATPGLVWNMMMSM 216 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVASE I VG+T + LPGIGS++ALAI +++L AI +A++ M VI LYDQLLF Sbjct: 217 SGGWFFVVASEAITVGNTTVNLPGIGSWLALAIAQENLTAIAWAVVAMTVVIVLYDQLLF 276 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SWV L R+T + + ++N + L Sbjct: 277 RPVVAWADKFRFEQTASQKRPRSWVYDLIRRT-----------HISTAIANVLGWPLHAL 325 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFC-VVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 +R+ +FL+ R S + D W V+ GV G+ Q + YI DV+ V Sbjct: 326 AALRWPRLPSFLRHTPGPRYSKVTDRLWLALVIIGVLAGVV-QLVQYIGASLGMADVIAV 384 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 +G T+ RVVVLI +AS+IW+P+G+WIG +P ++ ++QP AQ LAAFPANV FP V Sbjct: 385 FSMGLATLARVVVLIALASVIWLPIGVWIGLQPSVAERLQPLAQFLAAFPANVLFPFAVI 444 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ ++LNP++WLS LM+ GTQWYILFNVIAGA+A P D E A + I W+WWR + L Sbjct: 445 LIAGFNLNPDIWLSPLMVLGTQWYILFNVIAGAAALPTDLLEAARIYGIRRWQWWRQVAL 504 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 PGIFPYYVTGA+TA GG+WNASIVSE SWG HL TGLGAYIA +T FP V LG+ Sbjct: 505 PGIFPYYVTGALTASGGSWNASIVSESISWGKQHLEATGLGAYIANATTAADFPRVALGI 564 Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R LRL Sbjct: 565 AVMSVFVIAFNRLLWRPLYQFAERRLRL 592 >gi|294637815|ref|ZP_06716088.1| ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] gi|291089055|gb|EFE21616.1| ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] Length = 578 Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust. Identities = 292/572 (51%), Positives = 398/572 (69%), Gaps = 9/572 (1%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + PN +D++AF L+I +I ++ G +T P ++ I+L +LP+YA RTTLRML Sbjct: 14 LHPNRWDVVAFPLIISLIAMMAIGFHQTLQPLASLEKQSISLAPAALPEYALRTTLRMLV 73 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 AM+ SLLFT +Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 74 AMLASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFVALFPGRVLGV 133 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 ELAAIFAIFTSQ WNMTFS YQSL +P DL+EV+R +GWQ+FW L PF+MPGL+W Sbjct: 134 ELAAIFAIFTSQAWNMTFSFYQSLRTVPSDLDEVARGLHFTGWQRFWKLDAPFAMPGLIW 193 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSGGWFF+VASE I VG T LPGIG+Y+A AI ++DL AI + +LTM+ VI Sbjct: 194 NMMMSMSGGWFFIVASEAITVGHTHFVLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILA 253 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQLLFRP++ W++KFR+E T P SW+ L R+T+ F+PL + Sbjct: 254 YDQLLFRPLVAWADKFRMETTRSATPPTSWLFNLLRRTHLFH-------RLFAPLGQLLG 306 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 L R P L++ + R+ +D W + + + ++ + Y+ + + Sbjct: 307 WLARLPLRCPRRRPT--LKVATPSRIGPTIDRLWGGAILLLTLYLSVRVGAYVQSGVSLH 364 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 +V +V LG IT+ RV +LI+I+S+IW+P+G+ IG RP +++KIQP AQ LAAFPAN+ F Sbjct: 365 EVGHVFLLGLITLLRVSLLILISSLIWVPLGVLIGLRPALAAKIQPLAQFLAAFPANLLF 424 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P+ V + ++ L+P++WLS L++ GTQWYILFNV+AG +FPND++E A++FHI GW+WW Sbjct: 425 PVFVIVIVHFRLDPDIWLSPLIVLGTQWYILFNVVAGTMSFPNDYREAAANFHIHGWQWW 484 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 R I+LP +FPYYVTGAITA GGAWNASIV+E WG L GLGAYIAE+T G+FP Sbjct: 485 RQIMLPAVFPYYVTGAITAAGGAWNASIVAEYVQWGDTRLIAHGLGAYIAENTASGNFPH 544 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 ++LG+ +M FV NR LW PLY Y R Sbjct: 545 IILGIAMMALFVTLFNRLLWRPLYAYAETRFR 576 >gi|330810315|ref|YP_004354777.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378423|gb|AEA69773.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 546 Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust. Identities = 293/551 (53%), Positives = 377/551 (68%), Gaps = 12/551 (2%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 HG+ + P ++D P++LD+ LP+Y RTTLRM A+ S +F+ V ATLAAKSR+ Sbjct: 7 HGLDQMNQPLGVLDSSPLSLDLVHLPEYTLRTTLRMFIALFASFVFSLVVATLAAKSRKA 66 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 +V++P LDI+QS+P+LGFLTFTVV+FM L+PGK G E AAIFAIFTSQVWNMTFS YQ Sbjct: 67 AIVILPALDILQSVPVLGFLTFTVVFFMGLFPGKETGVECAAIFAIFTSQVWNMTFSFYQ 126 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 SL +P DL EVSR F S WQ+F L +PF+ PGLVWNMMMSMSGGWFFVVASE I VG Sbjct: 127 SLRTVPNDLYEVSRQFAFSPWQRFIRLELPFATPGLVWNMMMSMSGGWFFVVASEAITVG 186 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 DT + LPGIGS++ALAI++Q++ AI +A+L M+ VI YD L FRP++ W++KFR E+T Sbjct: 187 DTTVSLPGIGSWLALAIEQQNIAAIAWAVLAMVAVIIAYDLLFFRPIVAWADKFRFEQTA 246 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336 S V L R T + + + + + L ++KL R L IRF + Sbjct: 247 SQKRPRSRVYDLLRSTRLVPLVLLALGSIKASL--FLEKLPR-LPSIRFK---------T 294 Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396 + RVS D W +V I Q +I + ++DV LG IT+ RV VLI++ Sbjct: 295 SARVSRTADRVWLALVAAACIAGILQLSRFIGSTLGWEDVASTFGLGLITLVRVSVLIVL 354 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 AS++W+P+G+WIG P + ++QP AQLLAAFPANV FP V + LNP++WLS LM Sbjct: 355 ASVVWVPIGVWIGLNPRWAERLQPIAQLLAAFPANVLFPFAVIAIVALKLNPDVWLSPLM 414 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 I GTQWYILFNVIAGASA P D +E A SFHI GW+WWR + LPG+FPYYVTGA+TA GG Sbjct: 415 ILGTQWYILFNVIAGASALPTDLREAARSFHIHGWQWWRQVALPGVFPYYVTGALTAAGG 474 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576 +WNASIV+E SWG HL +GLG++IA++T G V LGV++M FV+ NR LW P Sbjct: 475 SWNASIVAEAVSWGDHHLYASGLGSFIAQATTAGDLQRVALGVVVMSIFVVGFNRLLWRP 534 Query: 577 LYLYGTRCLRL 587 LY + R LR+ Sbjct: 535 LYGFAERRLRI 545 >gi|285018221|ref|YP_003375932.1| ABC transporter permease [Xanthomonas albilineans GPE PC73] gi|283473439|emb|CBA15944.1| putative abc transporter transmembrane permease protein [Xanthomonas albilineans] Length = 584 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 295/580 (50%), Positives = 384/580 (66%), Gaps = 25/580 (4%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + PN+ DL F L++G+ +LLHG + P ++LD+ LP+Y RTTLRM + Sbjct: 20 VLPNLHDLTVFALLLGLGVLLLHGAADMRAPLPPPGTTSVSLDLWQLPEYGLRTTLRMFA 79 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 AM SLLFTFV ATLAAKSRR V+VP LDI+QS+P+LGFLTFTV +F+ L+PG+ IGA Sbjct: 80 AMAASLLFTFVVATLAAKSRRAERVIVPALDILQSVPVLGFLTFTVTFFLGLFPGRQIGA 139 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 ELA+IFAIFTSQ WNM FS YQSL N+PRDL+EV+R F +S WQ+FW L P++ P L+W Sbjct: 140 ELASIFAIFTSQAWNMAFSFYQSLRNVPRDLDEVARGFGMSAWQRFWRLEAPYATPSLIW 199 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSGGWFFVVASE I VGD + LPGIG+Y+ALAI +++ A+ +A+L M +I L Sbjct: 200 NMMMSMSGGWFFVVASEAITVGDHTLELPGIGAYLALAIGQRNFGAVAWAVLAMAVLIAL 259 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS-SWNF-------F 306 YDQLLFRP++ WS+KFR E T SW+ L R+T ++ + SW + + Sbjct: 260 YDQLLFRPIVAWSDKFRAELTASQNKPQSWLYDLLRRTRLVKRLAAPLSWAWQRTLLLRW 319 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +P +V +LG R + D FW + + AW + Y Sbjct: 320 APRRASVSTAEASLG-----------------RGAVWGDRFWSVSLAAAGLTAAWFAFDY 362 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 H + D+ G T+ RVVVLI +AS++W+P+G+WIG RP ++ ++QP AQ LA Sbjct: 363 GRRHLSLHDLGDAFCGGLATLLRVVVLIALASLVWVPIGVWIGLRPKVAQRVQPLAQFLA 422 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPANV FP V + NPN+WLS LMI GTQWYILFNVIAGASAFP D +E A+ + Sbjct: 423 AFPANVLFPFAVLAIVATGANPNIWLSPLMILGTQWYILFNVIAGASAFPTDLREAATIY 482 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + W WWR +ILPGIFPYYVTGA+TA GG+WNASIV+E+ASWG H++ GLG+YIA + Sbjct: 483 RLRSWTWWRRVILPGIFPYYVTGALTASGGSWNASIVAELASWGDRHVQAYGLGSYIARA 542 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 T G V+LGV +M FV NR +W LY++ R LR Sbjct: 543 TAAGDGARVLLGVAVMSLFVSIFNRAVWRRLYVFAERRLR 582 >gi|237801737|ref|ZP_04590198.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024596|gb|EGI04652.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 584 Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust. Identities = 291/567 (51%), Positives = 383/567 (67%), Gaps = 11/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D + VL+ + +LL+G + P D++ P++LD LP+YA RTTLRM A+ SL Sbjct: 28 DGVCLVLLAVFVGLLLYGAGQMLQPIDVLTSSPVSLDPARLPEYAWRTTLRMFIALAASL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNIAFSFYQSLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L+AI +A+ M VI YDQLLF Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLMAIAWAVGAMALVILAYDQLLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SW+ L R++ +G + L+ K L Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLRRSRLAPMLG-------ALLAAPWKGLM--- 317 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +I + N ++ VS ++D W +V + +I D+ Sbjct: 318 -LIDWRVLSNVWKVRPTPAVSRLIDYLWLGLVMAGCLAGGTYLFRFIEASLGLSDMATAF 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLIIIAS+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMLRVIVLIIIASLIWVPIGVWIGLRPVWAERLQPVAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 ++ HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LP Sbjct: 437 IAGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+FPYYVTGA+TA GG+WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|328543644|ref|YP_004303753.1| nitrate transporter permease [polymorphum gilvum SL003B-26A1] gi|326413389|gb|ADZ70452.1| Putative nitrate transport system permease protein [Polymorphum gilvum SL003B-26A1] Length = 577 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 293/570 (51%), Positives = 386/570 (67%), Gaps = 11/570 (1%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 +++DL+A +LV+G + L + P D I LD +LP YA+ TTLRML+AMV Sbjct: 18 SLWDLIAILLVLGALVFLAEASRGLMQPLPAADENVIVLDPAALPGYAAHTTLRMLAAMV 77 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +SL+FTF YAT AAKS R VL+P+LDI+QS+PILGF++ TVV+F++L PG ++GAELA Sbjct: 78 LSLVFTFTYATWAAKSHRAERVLIPLLDILQSVPILGFISVTVVFFLSLAPGMMLGAELA 137 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 A+FAIFTSQ WNM FS YQSL +P +L E +RSFRLS W +FW L VPF+MP LVWNMM Sbjct: 138 AVFAIFTSQAWNMAFSFYQSLRTVPAELAEAARSFRLSPWMRFWRLEVPFAMPALVWNMM 197 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MSMSGGWFFVVA+E I VG T + LPGIGSYIALAI E+DL AI +A+ TML VI +YDQ Sbjct: 198 MSMSGGWFFVVAAEAISVGGTTVTLPGIGSYIALAIAERDLGAIGWAIGTMLLVILIYDQ 257 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRP++ W+++FR E+ TG+ P SWVL R++ R + ++ + + + + L Sbjct: 258 LLFRPLVAWADRFRFEQETGVAPPRSWVLMTLRRS---RLVARATASLGAAWRWSYRALP 314 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 + R + LD V VA+ ++ ++ DV Sbjct: 315 KP--------GAGSASAAHPGRGARWLDRLLLGSVAVVALLGVVKAAQFLTAGVGLADVA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 + LG TM RV VLI IASIIW+PVG+WIG RP + QP AQ +AAFPAN+ FPL Sbjct: 367 TAVLLGFATMIRVFVLIAIASIIWVPVGVWIGLRPGAARIAQPVAQFMAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 VS + + L+P++WLS LMI GTQWYILFNV+AGAS P++ +++ +S + GW WW+ I Sbjct: 427 VSVIVGFRLDPDIWLSPLMILGTQWYILFNVVAGASTIPSELRDIGASLRVRGWLWWQRI 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 LP +FP+YVTGAITA GG+WNASIV+EVASWG L+ GLGA+IA++TE G F +VL Sbjct: 487 ALPAVFPFYVTGAITASGGSWNASIVAEVASWGQDRLQAHGLGAFIADATEAGDFHRIVL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G+ +M FV+ +NR W PLY + R RL Sbjct: 547 GIAVMSAFVVVINRIFWRPLYAFAERKYRL 576 >gi|269140443|ref|YP_003297144.1| binding-protein-dependent transport system inner membrane component [Edwardsiella tarda EIB202] gi|267986104|gb|ACY85933.1| binding-protein-dependent transport system inner membrane component [Edwardsiella tarda EIB202] gi|304560235|gb|ADM42899.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Edwardsiella tarda FL6-60] Length = 579 Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust. Identities = 293/571 (51%), Positives = 397/571 (69%), Gaps = 10/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++AF L+I +I ++ G + P ++ I+L +LP YA RTTLRML AM Sbjct: 16 PNRWDIVAFPLIISLIAMMAIGFHQALQPLASLEKQTISLAPSALPDYALRTTLRMLVAM 75 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + SLLFT +Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G EL Sbjct: 76 LASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFIALFPGRVLGVEL 135 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNMTFS YQSL +P DL+EV+R + WQ+FW L VPF+MPGL+WNM Sbjct: 136 AAIFAIFTSQAWNMTFSFYQSLRTVPGDLDEVARGLHFTSWQRFWKLDVPFAMPGLIWNM 195 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFF+VASE I VG+T LPGIG+Y+A AI ++DL AI + +LTM+ VI +YD Sbjct: 196 MMSMSGGWFFIVASEAITVGNTHFTLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILIYD 255 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR+E T P SW+L L R+T +PL + + L Sbjct: 256 QLLFRPLVAWADKFRMENTRTANPPTSWLLNLLRRTRLFH-------RLLAPLGHLLGWL 308 Query: 317 CRTLGVIRFHFPENFLQLCSNQ-RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R +R+ P + + R S LD+ W V + + + + + Y+ + + + Sbjct: 309 ARL--PLRWPGPARYRPAPTTPGRSSRYLDLLWGAAVLVLTLYLCTRVVLYVRSGVSLHE 366 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V YV+ +G +T+ RV +LI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ FP Sbjct: 367 VGYVLLMGLVTLLRVSLLILISSLIWVPLGVLIGLRPALAGKIQPLAQFLAAFPANLLFP 426 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 V + ++ LNP++WLS L++ GTQWYILFNV+AG FPND++EV ++ HI GW+WWR Sbjct: 427 AFVIAIMHFQLNPDIWLSPLIVLGTQWYILFNVVAGTMNFPNDYREVTANLHIRGWQWWR 486 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 I+LP IFPYYVTGA+TA GGAWNASIV+E WG + GLGAYIAE+T G+FP++ Sbjct: 487 QIMLPAIFPYYVTGAVTAAGGAWNASIVAEYVQWGDTRVAAHGLGAYIAENTASGNFPKI 546 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 +LG+ IM FV NR LW PLY Y R Sbjct: 547 ILGIAIMSLFVTLFNRLLWRPLYAYAESRFR 577 >gi|30248980|ref|NP_841050.1| putative nitrate transport system permease protein [Nitrosomonas europaea ATCC 19718] gi|30138597|emb|CAD84888.1| putative nitrate transport system permease protein [Nitrosomonas europaea ATCC 19718] Length = 580 Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust. Identities = 291/585 (49%), Positives = 389/585 (66%), Gaps = 23/585 (3%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 +S R +DL+A +LV+G++ L ++ P I+L+ LP+Y RT+L Sbjct: 10 LSHRFSAIFWDLVAVLLVLGMVVFLAQTSRDLMQPLAGPGETVISLEPSGLPEYVLRTSL 69 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RML+AMV+SL+FTF YAT AAKSRR G VL+P+LDI+QS+PILGF++ TVV+FM+ PG+ Sbjct: 70 RMLAAMVLSLIFTFTYATWAAKSRRAGQVLIPLLDILQSVPILGFISVTVVFFMSFAPGR 129 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++GAEL AIFAIFTSQ WNM FS YQSL +P +L E SRSFRLS W +FW L VPF+MP Sbjct: 130 MLGAELVAIFAIFTSQAWNMAFSFYQSLRTVPTELVEASRSFRLSPWMRFWKLEVPFAMP 189 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 LVWNMMMSMS GWFFVVASE I VG+TV+ LPGIGSYIALAI ++DL A+ A+ ML Sbjct: 190 ALVWNMMMSMSAGWFFVVASEAISVGNTVVTLPGIGSYIALAIDQRDLGAVGRAIAVMLI 249 Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-----FIGYSSWNF 305 VI +YDQLLFRP++ W ++FR E+ P SWVL R++ ++ + W + Sbjct: 250 VILIYDQLLFRPLVAWVDRFRFEQEADRNPPRSWVLMALRRSRWVAMAVVPLVRMWRWTY 309 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF---CVVCGVAIGIAWQ 362 + ++L RT + V LD W+ V+C V++ W+ Sbjct: 310 RAGNDGASRELART------------ARNTMGSGVISWLDWLWYGAIAVICAVSM---WK 354 Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 +++ T +V ++LGC+TM RV VLI +AS+IW+PVG+WIG P + IQP Sbjct: 355 ITVFVLQGVTPDEVGTTVFLGCVTMVRVFVLIAVASVIWVPVGVWIGLHPAAARIIQPVT 414 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q +AAFPAN+ FPL VS + L+P++WLS LMI GTQWYILFNVIAGAS P + +++ Sbjct: 415 QFMAAFPANLLFPLAVSGIVVLRLDPDIWLSPLMILGTQWYILFNVIAGASTIPGELRDI 474 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + + GW WWR I LP +FP+Y+TGA+TA GG+WNASIV+E+A+WG L+ GLGAY Sbjct: 475 GINLGVRGWLWWRRIALPAVFPFYMTGAVTASGGSWNASIVAELANWGDTTLKANGLGAY 534 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 IAE+T G F +VLG+ +M FV+ +NR W PLY+ R RL Sbjct: 535 IAEATAAGDFHRIVLGIAVMSAFVVLINRLFWRPLYILAERKFRL 579 >gi|187926710|ref|YP_001893055.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gi|241665042|ref|YP_002983401.1| binding-protein-dependent transporters inner membrane component [Ralstonia pickettii 12D] gi|187728464|gb|ACD29628.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gi|240867069|gb|ACS64729.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] Length = 577 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 292/571 (51%), Positives = 383/571 (67%), Gaps = 12/571 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P DLLA +LV+G++ +L G ++ P I+L +LP Y RT RM +A+ Sbjct: 18 PRWRDLLAMLLVLGMVLLLGSGARQMVGPLVAASQPEISLSPLALPAYVLRTVTRMFAAL 77 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +SLLFTF YATLAAKSRR MVL+P+LD++QS+PILG+L+FTVV+FM L+PG V+GAEL Sbjct: 78 ALSLLFTFTYATLAAKSRRAEMVLIPLLDVLQSVPILGYLSFTVVFFMALFPGNVLGAEL 137 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AA+FAIFTSQ WNM FS YQ+L IP DL+E SR FR S WQ+FW L VPF+MPGLVWNM Sbjct: 138 AAVFAIFTSQAWNMAFSFYQALRTIPADLDEASRGFRASSWQRFWRLEVPFAMPGLVWNM 197 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VGD + LPG+G+Y+A AI ++DL A+ +A+L M I LYD Sbjct: 198 MMSMSGGWFFVVASEAISVGDVRVALPGVGAYVARAIAQRDLGAVGWAILAMAVAIVLYD 257 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRPM+ W++KFR E+T P SW+L LF ++ +++ +P+ + + Sbjct: 258 QLLFRPMVAWADKFRFEQTASQMPPRSWLLDLFHRSAWVQ-------RMMAPVGIALHQA 310 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R +R+ P + +R+ D W + A + DV Sbjct: 311 ARAQ--LRWPLPAMRWKGAMPRRLG---DALWLGLCAAGAAYAMLALYRLAGRTLAWTDV 365 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V G T+ RV+VLI +ASI+W+PVG+ +G P ++++QP AQ LAAFPAN+ FP+ Sbjct: 366 ATVARSGAFTLLRVMVLIALASIVWVPVGVAVGLSPRWTARVQPLAQFLAAFPANLLFPV 425 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV + +H + ++WLSLLMI GTQWYILFNVIAGA+AFP+D +E A+SF I WWR Sbjct: 426 VVFLIVRFHGSVDVWLSLLMILGTQWYILFNVIAGAAAFPSDLRETATSFRIRAPNWWRK 485 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LPGI PYYVTG ITA GGAWNASIV+E SWG +HL+ GLGAY+A+ T G +P + Sbjct: 486 VMLPGILPYYVTGVITASGGAWNASIVAEAVSWGAVHLQAQGLGAYVAQQTAAGDYPRIA 545 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ M V+A NR LW PLY Y R +RL Sbjct: 546 LGIAAMSLMVIATNRLLWRPLYAYAERRMRL 576 >gi|226939379|ref|YP_002794452.1| ABC transporter nitrate permease [Laribacter hongkongensis HLHK9] gi|226714305|gb|ACO73443.1| probable ABC transporter nitrate permease [Laribacter hongkongensis HLHK9] Length = 576 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 292/586 (49%), Positives = 391/586 (66%), Gaps = 27/586 (4%) Query: 12 SRRIF----PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 SRR P +D LAF L+ G++ + HG++E P I+ P++LD +LP YA Sbjct: 7 SRRFLAGFRPTPWDGLAFALIFGLLLLFGHGVREAWQPLAILQAEPVSLDPANLPAYALY 66 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRML+A+ +S LFT YATLAA+S R G +++P LDI+QSIP+LG+L+FTV +F+ L+ Sbjct: 67 TTLRMLAALAVSFLFTLGYATLAARSARAGKLMIPALDILQSIPVLGYLSFTVTFFLALF 126 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+++GAE AAIFAIFTSQ WNM FS+YQSL +PRDL EV+ S RL+ WQ+FW L +P+ Sbjct: 127 PGRMMGAECAAIFAIFTSQAWNMAFSLYQSLTTLPRDLVEVAASLRLTAWQRFWKLDLPY 186 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +MPGLVWNMMMSMSG WFFVVASE +VVG + LPGIGSY+A+AI +DL A+ + +LT Sbjct: 187 AMPGLVWNMMMSMSGSWFFVVASEALVVGQQQVMLPGIGSYLAVAIDVRDLGAVGWVVLT 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ML VI LYDQ+LFRP++ WS KF L+ T G+ + SW+L L + ++ + Sbjct: 247 MLVVIILYDQVLFRPLVAWSEKFNLQVTAGVAGSGSWLLTLGERARLIQTL--------- 297 Query: 308 PLSNNVKKLCRTLGVIRFHF------PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 L R G + H P Q + D W + +A+ W Sbjct: 298 --------LVRPAGRLLSHVAQLPLGPRLRWQAEAPASTPGWPDRLWLAGLTALALWALW 349 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 Y+ + DVL V LG +T+ RV VLI++AS++W+PVG+WIG RP ++ ++Q Sbjct: 350 SVWHYLAQAVDFHDVLAVFGLGALTLLRVAVLIVLASLVWVPVGVWIGLRPQLAGRVQAM 409 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 AQ LAAFPAN+ FP V + ++ L+PN+WLS L+IFGTQWYILFNV+AGA AFP +++E Sbjct: 410 AQFLAAFPANLLFPACVVLIIHFRLDPNVWLSPLLIFGTQWYILFNVVAGAQAFPAEYRE 469 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 VAS+ I G WWR ++LPGIFPY++TGA+TA GGAWNASIV E SWG+ L GLG+ Sbjct: 470 VASNLQIRGGLWWRKVMLPGIFPYFLTGALTASGGAWNASIVGEYVSWGNDVLVAKGLGS 529 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 YIAE T G P+V+LG+L+M +V+ NR LW PL R L L Sbjct: 530 YIAEHTASGQHPQVLLGILVMAVYVVLFNRLLWRPLQELAERRLSL 575 >gi|148553197|ref|YP_001260779.1| binding-protein-dependent transport systems inner membrane component [Sphingomonas wittichii RW1] gi|148498387|gb|ABQ66641.1| binding-protein-dependent transport systems inner membrane component [Sphingomonas wittichii RW1] Length = 582 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 285/571 (49%), Positives = 372/571 (65%), Gaps = 12/571 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN D++A +L+ G+ +++ G + P + P+TLD +LP YA RTTLRM +A+ Sbjct: 23 PNRADIIAVLLLAGLSILVIRGAEGMAEPLARLRNAPVTLDPWNLPGYALRTTLRMFAAL 82 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL FT TLAA+SRR ++VP LDI+QS+PILGFLTFTV +FM L+PG+ +G EL Sbjct: 83 FASLAFTLAIGTLAARSRRAEQIIVPALDILQSVPILGFLTFTVTFFMGLFPGRQLGVEL 142 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 A+IFAIFTSQ WNM FS YQSL ++P DLEEVSR F LS ++F L +PF+ P LVWN Sbjct: 143 ASIFAIFTSQAWNMAFSFYQSLRSVPSDLEEVSRGFGLSPLRRFLRLELPFATPALVWNA 202 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VG+T + LPGIGS++ALAI D + +A+ M VI LYD Sbjct: 203 MMSMSGGWFFVVASEAITVGNTSVTLPGIGSWLALAIDRSDFTGVAWAVGAMAVVILLYD 262 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QL+FRP++ W+++FR E+ SW LFR+T L + + + Sbjct: 263 QLVFRPVVAWADRFRFEQVASTERPRSWAYELFRRTRLLPLLLM--------PLAGLGRA 314 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 L +R P + R + D W + + AW IGY+ + + Sbjct: 315 LLMLDPVRAPRPAG----RAEARRGVIGDRVWTAAIAIAVLFAAWTIIGYVGRTLDWAEA 370 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V L C+TM RV+ LI +AS+IW+PVG+WIG RP + ++QP AQ LAAFPANV FP Sbjct: 371 AAVFGLACLTMLRVLALIAVASLIWVPVGVWIGLRPQWAERLQPVAQFLAAFPANVLFPF 430 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + + L+P++WLS LM+ GTQWYILFNVIAGASA P D +E A F + GW+WWR Sbjct: 431 AVIAIVRWKLDPDIWLSPLMVMGTQWYILFNVIAGASAIPTDLREAAGMFGVRGWQWWRQ 490 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPGIFPYYVTGA+TA GG+WNASIV+E SWG HL +GLGA+IA++T G +P V Sbjct: 491 VALPGIFPYYVTGALTASGGSWNASIVAEAVSWGDDHLHASGLGAFIADATAIGDYPRVA 550 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+A NR LW PLY + R LRL Sbjct: 551 LGIAMMSLFVIAFNRLLWRPLYSFAERRLRL 581 >gi|148258639|ref|YP_001243224.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146410812|gb|ABQ39318.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 585 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 284/552 (51%), Positives = 372/552 (67%), Gaps = 17/552 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+ + P ++ P+ L + LP+YA +TLRM A+ SL+FT ATLAAKSR+ Sbjct: 46 GVGQMRQPLTALNAAPVDLQLLHLPEYALLSTLRMFGALAASLIFTLTVATLAAKSRKAE 105 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 +++VP LDI+QS+P+LGFLTFTV++FMNL+PG+ +G E AAIFAIFTSQ WNM FS YQS Sbjct: 106 LIIVPALDILQSVPVLGFLTFTVMFFMNLFPGRQLGVECAAIFAIFTSQAWNMAFSFYQS 165 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P+DL+EVSR F S W++F L +PF+MPGLVWN MMSMSGGWFFVVASE I VG+ Sbjct: 166 LRTVPKDLDEVSRQFGFSSWRRFVRLELPFAMPGLVWNAMMSMSGGWFFVVASEAIAVGN 225 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 T I LPGIGS++ALAI+ +D A+ +A+ M VI LYDQL+FRP++ W++KFR E+T Sbjct: 226 TTIALPGIGSWLALAIERKDFGAVAWAVFAMAVVIVLYDQLIFRPIVAWADKFRFEQTAS 285 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC---RTLGVIRFHFPENFLQL 334 SWV L R+T L I ++ L R L + + P L Sbjct: 286 RERPRSWVYDLARRTRLLPSI--------------IELLLVAGRALSALSWSAPPRRQTL 331 Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394 N+ + + D W + V G + + +I T D++ ++ LG T+ RV VLI Sbjct: 332 HPNKHIIRVPDGLWIGFIAVVCFGASLWLLRFISTSLTAADIISIVGLGFATLVRVAVLI 391 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 IASIIW+P+G+WIG RP S ++QP AQ LAAFPANV FP V + L+PN+WLS Sbjct: 392 AIASIIWVPIGVWIGLRPTWSERLQPVAQFLAAFPANVLFPFAVVIIIGLRLDPNIWLSP 451 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 LMI GTQWYILFNVIAGASA PND +E A +F++ G +WWR + LPGIFPY+VTGA+TA Sbjct: 452 LMILGTQWYILFNVIAGASALPNDLREAARTFNMRGLQWWRQVALPGIFPYFVTGALTAS 511 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574 GG+WNASIV+E SWG L+ TGLG++IA++T G P V +G+++M FV+ LNR LW Sbjct: 512 GGSWNASIVAESVSWGDKRLQATGLGSFIADATAAGDLPRVAVGIVVMSAFVVTLNRTLW 571 Query: 575 HPLYLYGTRCLR 586 PLY Y R LR Sbjct: 572 RPLYRYAERRLR 583 >gi|170742462|ref|YP_001771117.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168196736|gb|ACA18683.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 602 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 295/583 (50%), Positives = 388/583 (66%), Gaps = 16/583 (2%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + PN +D+ AF++VIG + LHG+ E P +D P+ LD LP YA RTTLR+ + Sbjct: 25 LIPNGYDVAAFLVVIGGLIATLHGVHEMRAPLAALDGEPVRLDPWLLPDYALRTTLRLFA 84 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 AM SL+FT + A LAAKSR+ +V+VP LDI+QS+P+LGFL+FTV +F+ L+PG+ +GA Sbjct: 85 AMAASLVFTVLVAPLAAKSRKAELVIVPALDILQSVPVLGFLSFTVAFFLGLFPGRQLGA 144 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFA+FT+Q WNM FS YQSL N+PRDL EV+R FRLS WQ+F L PF++PGLVW Sbjct: 145 ECAAIFAVFTAQAWNMAFSFYQSLRNLPRDLTEVTRHFRLSPWQRFVRLEAPFAVPGLVW 204 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 N MMSMSG WFF+VASE I VGDT I LPGIG+++ALAI +DL AI +A+ + VI L Sbjct: 205 NAMMSMSGSWFFIVASEAISVGDTRITLPGIGAWLALAIDRKDLAAIAWAVAAIAAVILL 264 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR----------FIGYSSWN 304 YDQL+FRP++ W++KFR E+T S+V L R+T LR + S Sbjct: 265 YDQLVFRPIVAWADKFRFEQTAAQARPRSFVYDLLRRTRALRGIAALVGAAAALLGSVIR 324 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P L T +R P L + ++ + D W V +A W + Sbjct: 325 AAAPFRRASSLLPATRK-LRLAKP-----LLAKPLLATLADRAWLVAVVALAASALWIAA 378 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ D++ + LG +T+ RVVVLI +AS+IW+P+G+WIG RP ++ QP AQ Sbjct: 379 DFVRATLGLGDLVEAVALGALTLLRVVVLIAVASVIWVPIGVWIGLRPAVAEATQPLAQF 438 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+ FP V + +PN+WLS LM+ GTQ YILFNV+AGASAFP D +E A+ Sbjct: 439 LAAFPANILFPFAVVAIVATGADPNIWLSPLMVLGTQCYILFNVVAGASAFPTDLREAAT 498 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + + W+WWR ILPGIFPYYVTGA+TA GG+WNASIV+EVASWG L+ GLGAYIA Sbjct: 499 LYRMRSWQWWRDAILPGIFPYYVTGALTASGGSWNASIVAEVASWGDTKLKAAGLGAYIA 558 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++T+ G +P VVLGV +M FV+ NR +W PLY YG R RL Sbjct: 559 QATDAGDYPRVVLGVAVMSLFVVVFNRLVWRPLYAYGERRFRL 601 >gi|71734937|ref|YP_277251.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555490|gb|AAZ34701.1| ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 584 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 284/567 (50%), Positives = 380/567 (67%), Gaps = 11/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ SL Sbjct: 28 DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLF Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SW+ L ++ +G + + C+ L Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPCKCL 316 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +I + + V+ +LD W +V + + +I D++ + Sbjct: 317 MLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAL 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRRVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|330961443|gb|EGH61703.1| ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 584 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 285/569 (50%), Positives = 380/569 (66%), Gaps = 11/569 (1%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 I D + V++ I +L +G+ + P ++D P+TLD LP+YA RTTLRM A+ Sbjct: 26 IADGICVVILAVFIALLWYGVGQMLQPLAVLDSSPVTLDPARLPEYALRTTLRMFIALAA 85 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SL+FTF+ ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA Sbjct: 86 SLIFTFIVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMM Sbjct: 146 IFAIFTSQAWNIAFSFYQSLRTVPNDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 SMSGGWFFVVA E I VGDT + LPGIGS++ALA+++++L AI +A+ M VI YDQL Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAVEQKNLPAIGWAVGAMALVILAYDQL 265 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 LFRP++ W++KFR E+T SWV + ++ + + + Sbjct: 266 LFRPVVAWADKFRFEQTASSKRPRSWVYSVLGRSRLAPLL-----------GALLAAPWK 314 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L +I + F ++ RV+ ++D W +V + + +I D++ Sbjct: 315 GLMLIDWRVVSRFWKVKPTPRVARLIDYLWLGMVMAACLTASLYLFRFIEASLGLSDMIT 374 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 LG TM RV+VLI++AS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 375 AFGLGLATMLRVIVLIMVASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAV 434 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + Sbjct: 435 IAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIASATQAGDFPRVTLG 554 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + +M FV+A NR LW PLY + R L L Sbjct: 555 IAVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|320321792|gb|EFW77890.1| ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331540|gb|EFW87480.1| ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 584 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 283/567 (49%), Positives = 379/567 (66%), Gaps = 11/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ SL Sbjct: 28 DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +P ++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPLAVPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLF Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SW+ L ++ +G + + C+ L Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPCKCL 316 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +I + + V+ +LD W +V + + +I D++ + Sbjct: 317 MLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAL 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRRVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|15837013|ref|NP_297701.1| ABC transporter nitrate permease [Xylella fastidiosa 9a5c] gi|9105249|gb|AAF83221.1|AE003892_6 ABC transporter nitrate permease [Xylella fastidiosa 9a5c] Length = 584 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 293/576 (50%), Positives = 386/576 (67%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN++DL+A L++ + LLHG + P + + ++LD LP+Y RTTLRM Sbjct: 19 RAQLPNVYDLVALALILLLGIALLHGAEGARAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +AM SLLFTFV ATLAAKS+R ++VP LD++QS+P+LGFLTFTV +F+ L+PG + Sbjct: 79 FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 GAE A++FA+FTSQ WNM FS YQSL +PRDL+EVSR F S W +FW L VPF+MPGL Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI Q A+ +A+ M +I Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMAFLI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQLLFRP++VW++KFR+E T G SWV L +T L+ +PL+ Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLK-------RLVAPLT-- 309 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 +L + + ++R+ + + R S D W V+ VA + + Sbjct: 310 --RLWQRVLLLRWTKRNRVTVVPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 +D+ + T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP Q LAAFPAN Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 V FP V + NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A + + W Sbjct: 428 VLFPFAVVAIVTTGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+ GLG+YIA +TE G Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P V+LGV++M FV NR LW L+++ R LRL Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583 >gi|289625535|ref|ZP_06458489.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649788|ref|ZP_06481131.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330870904|gb|EGH05613.1| ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 584 Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust. Identities = 284/567 (50%), Positives = 378/567 (66%), Gaps = 11/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ SL Sbjct: 28 DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLF Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SW+ L ++ +G + + C+ L Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPCKCL 316 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +I + + V +LD W +V + + +I D++ Sbjct: 317 MLIDWRVVSRLWNVKLTPGVVRLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAF 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMGRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRRVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|257485651|ref|ZP_05639692.1| ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 584 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 282/567 (49%), Positives = 380/567 (67%), Gaps = 11/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ SL Sbjct: 28 DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQ+LF Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQVLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SW+ + ++ +G + + C+ L Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLG-----------SILAAPCKCL 316 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +I + + V+ +LD W +V + + +I D++ + Sbjct: 317 MLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAL 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRCVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|331011939|gb|EGH91995.1| ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 584 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 281/567 (49%), Positives = 379/567 (66%), Gaps = 11/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ SL Sbjct: 28 DGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQ+LF Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQVLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SW+ + ++ +G + + C+ L Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLG-----------SILAAPCKCL 316 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +I + + V+ +LD W +V + + +I D++ + Sbjct: 317 MLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAL 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRCVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+ PYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVVPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|197116829|ref|YP_002137256.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197086189|gb|ACH37460.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 578 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 285/574 (49%), Positives = 387/574 (67%), Gaps = 10/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R PN +DL AF++V+G++ + G +E +P + +P++LD +LP+YA RT LRM Sbjct: 14 RAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVNLPEYALRTVLRMA 73 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A+ SLLFTF Y TLAAKSRR +LVP+L+I+QS+PILGFL+ TV F+ ++PGK++G Sbjct: 74 AALAFSLLFTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTVTGFIAMFPGKLLG 133 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E AAIFAIFTSQ WNM FS YQSL IP DL E S F LS WQ+FW L PF+MP L+ Sbjct: 134 VECAAIFAIFTSQAWNMAFSFYQSLKTIPSDLSEASVLFGLSPWQRFWKLDAPFAMPPLI 193 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMS+SGGWFFVVASE I VG T + LPGIGSY+A AI + L AI +A+LTML VI Sbjct: 194 WNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSAIGWALLTMLLVIL 253 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 +YDQLLFRPM+ W++KF+ E T + SWVL LF++ LR G N + L++ + Sbjct: 254 VYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGRFLVNRWIRLTDLL 313 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + + R F + + + +I W ++ G AW + ++ Sbjct: 314 PRRKQ-----RASFRD-----ATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGEVDG 363 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ V +LG +T+ RV VL+IIAS+IW+P+G++IG P ++++QP AQ LAAFPAN+F Sbjct: 364 AEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGLNPKWATRVQPLAQFLAAFPANLF 423 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +YHL+P +W + LMI GTQWYILFNVI GASA P D +E A +F ++GW+ Sbjct: 424 FPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSGWKL 483 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 W+ ++LPGIFP VTG +TA GG WNASIV+E+ +WG+ L TGLG+YIA TEKG +P Sbjct: 484 WKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKGDYP 543 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + LG+ +M +VL LNRF W L+ RL Sbjct: 544 RIALGIAVMSIYVLVLNRFFWERLFTVSQTRYRL 577 >gi|330986971|gb|EGH85074.1| ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 584 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 283/567 (49%), Positives = 377/567 (66%), Gaps = 11/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ SL Sbjct: 28 DGICLVVIAVFITLVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIALAASL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 VFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLF Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SW+ L ++ +G + + C+ L Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPCKCL 316 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +I + + V +LD W +V + + +I D++ Sbjct: 317 MLIDWRVVSRLWNVKLTPGVVRLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDLVTAF 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLI+IAS+IW+PVG+WIG R + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGVWIGLRLVWAERLQPIAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRRVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|182678590|ref|YP_001832736.1| binding-protein-dependent transport systems inner membrane component [Beijerinckia indica subsp. indica ATCC 9039] gi|182634473|gb|ACB95247.1| binding-protein-dependent transport systems inner membrane component [Beijerinckia indica subsp. indica ATCC 9039] Length = 578 Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/579 (50%), Positives = 395/579 (68%), Gaps = 12/579 (2%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 F+ R+ PN +D AF+L++ + +G T+P + I+LD +LP YA RTT Sbjct: 10 FLDRKSLPNPYDFAAFILLLAAFVAVAYGSSGLTLPLSAPEATHISLDYGALPYYALRTT 69 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LRM +A+ SL+FTF YATLAAKS+R +VL+P+LDI+QS+PILGFL+FTV +F++L+PG Sbjct: 70 LRMFAAIAASLVFTFTYATLAAKSQRAALVLIPLLDILQSVPILGFLSFTVTFFLHLFPG 129 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 +G E AA+FAIFTSQ WNM FS YQSL ++PRDL EV+ F LS WQKFW L P++M Sbjct: 130 STLGVECAAVFAIFTSQAWNMAFSFYQSLRSLPRDLVEVANGFHLSPWQKFWQLETPYAM 189 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P L+WN MMSMSGGWFFVVASE I VGDT + LPGIGSY+A AI+ + + A++ A+ M Sbjct: 190 PALIWNTMMSMSGGWFFVVASEAISVGDTTVKLPGIGSYLAQAIEMRRIDAVIAAVAAMA 249 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 VI LYDQLLFRP++V++ KFR+E + SWV LF +T +LR + + Sbjct: 250 IVILLYDQLLFRPLVVFAGKFRVELSASQTKESSWVADLFNRTRWLRAL----------M 299 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQ-RVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 S V+ L ++ + R P Q Q S +LD+ W ++ +++ I ++ Sbjct: 300 SMPVQTLS-SIALWRLELPFWRAQAIDKQAHSSRVLDLLWITLIAFLSLWALRFVIVFVG 358 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 T+ D+ + L TM RVV+L+ +A+++W+P+G++IG RP ++ KIQP AQ LAAF Sbjct: 359 QTLTFADIQESLILTFFTMLRVVLLMALATLVWVPIGVFIGLRPALAEKIQPLAQFLAAF 418 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PANV FP+VV + + LNP++WLS L+IFGTQWYILFNVIAG AFPND KE ASSF I Sbjct: 419 PANVVFPIVVVVIVRFGLNPDIWLSFLIIFGTQWYILFNVIAGTMAFPNDLKEAASSFGI 478 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 GW WW +ILPGIFP+YVTGA+TA GG+WNA+IV+E WG + + G+GAYIA++T Sbjct: 479 KGWNWWTSVILPGIFPFYVTGALTASGGSWNAAIVAESVKWGDVSIEAHGIGAYIADATA 538 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 KG +P +VLGV +M V+ NR +W PL+ R LRL Sbjct: 539 KGDYPRIVLGVTVMSIVVILFNRLVWRPLFGLAERRLRL 577 >gi|289677501|ref|ZP_06498391.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae FF5] gi|330898685|gb|EGH30104.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 584 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 283/567 (49%), Positives = 377/567 (66%), Gaps = 11/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D + L+ I + ++G + P +++ P++LD LP+YA RTTLRM A+ SL Sbjct: 28 DGICLALLTLFIGLFIYGFGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIALGASL 87 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIF Sbjct: 88 IFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIF 147 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMMSM Sbjct: 148 AIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSM 207 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLF Sbjct: 208 SGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLF 267 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KFR E+T SW+ L ++ +G + + + L Sbjct: 268 RPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SVLAAPWKCL 316 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +I + ++ V+ +LD W +V + + +I D++ Sbjct: 317 MLIDWRVFSRLWKVKLTPGVARVLDYVWLGLVMAACLAGSVYLFRFIEASLGASDMVTAF 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|330937353|gb|EGH41350.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 584 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 281/556 (50%), Positives = 374/556 (67%), Gaps = 11/556 (1%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 I + ++G+ + P +++ P++LD LP+YA RTTLRM A+ SL+FTFV ATLAA Sbjct: 39 IGLFIYGLGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIALGASLIFTFVVATLAA 98 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 KSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ Sbjct: 99 KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278 Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331 E+T SW+ L ++ +G + + + L +I + Sbjct: 279 FEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SILAAPWKCLMLIDWRVFSRL 327 Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 ++ V+ +LD W +V + + +I D++ LG TM RV+ Sbjct: 328 WKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDMVTAFGLGLATMVRVI 387 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP V + HLNP++W Sbjct: 388 VLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 LS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+ Sbjct: 448 LSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG+++M FV+A NR Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567 Query: 572 FLWHPLYLYGTRCLRL 587 LW PLY + R L L Sbjct: 568 LLWRPLYGFAERRLSL 583 >gi|330878195|gb|EGH12344.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 584 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 280/550 (50%), Positives = 368/550 (66%), Gaps = 11/550 (2%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G + P D+++ P++LD LP+YA RTTLRM A+ SL+FTF ATLAAKSR+ Sbjct: 45 GAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFAVATLAAKSRKAE 104 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQS Sbjct: 105 QVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQS 164 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 T + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR E+T Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFRFEQTAS 284 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 SW+ L ++ LS + + L +I ++ Sbjct: 285 SKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333 Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 V ++D W +V + + +I + D++ LG TM RV+VLI+IA Sbjct: 334 PGVVRVMDYLWLALVMAGCLTASVYLFRFIEASLGFSDMVSAFGLGLATMLRVIVLIVIA 393 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V + HLNP++WLS LM+ Sbjct: 394 SLIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLMV 453 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+ Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG+++M FV+A NR LW PL Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573 Query: 578 YLYGTRCLRL 587 Y + R L L Sbjct: 574 YGFAERRLSL 583 >gi|167561672|ref|ZP_02354588.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147] Length = 577 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 282/553 (50%), Positives = 365/553 (66%), Gaps = 18/553 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G ++ +P D+ I+L +LP YA RT LRML+A+ S FTF YATLAA+SR Sbjct: 39 GARQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFAFTFAYATLAARSRAAE 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTVV+F+++ P GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVVFFLSITPSSTFGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 LC +PRDL+E SRS R +GWQ+FW L VPF+MPGL WN MMSMSGGWFFVVASE I VGD Sbjct: 159 LCTVPRDLDEASRSLRQTGWQRFWRLEVPFAMPGLAWNAMMSMSGGWFFVVASEAISVGD 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPG+G+Y+A AI E+DL A+ YA+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LHIALPGVGAYVARAIAERDLAAVGYAIAAMTIAIVLYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 SW+L L + + + +G +PL + + R + P + L Sbjct: 279 GPAPRSWLLDLLHRASLPQRVG-------TPLGAMLHRAARARLSLGARLPAHERSLSRR 331 Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIG---YIVNHFTYQDVLYVIWLGCITMFRVVVLI 394 I WF +C A GI + IG + T+ DV+ V G +T+ RV+VLI Sbjct: 332 -----FGRIVWFS-LC--AAGIVYAGIGLFRFAAPVLTWADVVDVARNGALTLARVLVLI 383 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +AS +W+P+G+ IG RP ++ +QP AQ LAAFPAN+ FP V ++++ L P +WLS Sbjct: 384 GVASAVWVPIGVLIGLRPRATAFVQPIAQFLAAFPANLLFPPAVFAIAHFELTPAIWLSP 443 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 LMI GTQWYILFNVIAGA+ FP+D KE A+S + WW ++LPGI PYYVTGAITA Sbjct: 444 LMILGTQWYILFNVIAGATVFPDDLKEAAASLRVRTPTWWTKVVLPGILPYYVTGAITAS 503 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574 GGAWNASIVSE+ WGH L +GLGAY+A T G +P + LGV M V+A+NR +W Sbjct: 504 GGAWNASIVSELVGWGHTTLDASGLGAYVARMTAAGDYPRIALGVAAMSLLVIAMNRLMW 563 Query: 575 HPLYLYGTRCLRL 587 PLY + R RL Sbjct: 564 RPLYAFAERRSRL 576 >gi|330952378|gb|EGH52638.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae Cit 7] Length = 584 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 286/567 (50%), Positives = 374/567 (65%), Gaps = 33/567 (5%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 I + ++G+ + P +++ P++LD LP+YA RTTLRM A+ SL+FTFV ATLAA Sbjct: 39 IGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLAA 98 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 KSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ Sbjct: 99 KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278 Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIG-----------YSSWNFFSPLSNNVKKLCRTL 320 E+T SW+ + ++ +G W FS L K+ T Sbjct: 279 FEQTASSKRPRSWMYSVLGRSRVAPMLGSILAAPWKCLMLIDWRVFSRL----WKVKLTP 334 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 GV+R +LD W +V + + +I D++ Sbjct: 335 GVVR------------------VLDYAWLGLVMAACLAGSVYLFRFIEASLGVSDMVTAF 376 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 LG TM RV+VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP V Sbjct: 377 GLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIA 436 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LP Sbjct: 437 IVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALP 496 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG++ Sbjct: 497 GVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIV 556 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+A NR LW PLY + R L L Sbjct: 557 VMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|238921314|ref|YP_002934829.1| nitrate/sulfonate/bicarbonate ABC transporter [Edwardsiella ictaluri 93-146] gi|238870883|gb|ACR70594.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Edwardsiella ictaluri 93-146] Length = 578 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 292/570 (51%), Positives = 394/570 (69%), Gaps = 9/570 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++AF L+I +I ++ G + P + I+L +LP YA RTTLRML AM Sbjct: 16 PNRWDIVAFPLIISLIAMMAIGFHQALQPLASLGKQSISLAPDALPDYALRTTLRMLLAM 75 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + SLLFT +Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G EL Sbjct: 76 LASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFIALFPGRVLGVEL 135 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNMTFS YQSL +P DL+EV+R +GWQ+FW L VPF+MPGL+WNM Sbjct: 136 AAIFAIFTSQAWNMTFSFYQSLRTVPGDLDEVARGLHFTGWQRFWKLDVPFAMPGLIWNM 195 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFF+VASE I VG+T LPGIG+Y+A AI ++DL AI + +LTM+ VI +YD Sbjct: 196 MMSMSGGWFFIVASEAITVGNTHFTLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILIYD 255 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+++FR+E T P SW+L L R+T F+PL + L Sbjct: 256 QLLFRPLVAWADRFRMENTRTANPPTSWLLNLLRRTRLFH-------RLFTPLGQLLGWL 308 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R +R+ + + R LD+ W + + + + + I Y+ + + +V Sbjct: 309 ARL--PLRWPGQPRYRPAPAPGRSQRYLDLLWSAAILLLTLYLCTRVILYVHSGVSLHEV 366 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 YV+ +G +T+ RV +LI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ FP Sbjct: 367 GYVLLMGLVTLLRVSLLILISSLIWVPLGVLIGLRPALAGKIQPLAQFLAAFPANLLFPA 426 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + ++ LNP++WLS L++ GTQWYILFNV+AG FPND++EV ++ HI GW+WWR Sbjct: 427 FVIAIMHFQLNPDIWLSPLIVLGTQWYILFNVVAGTMNFPNDYREVTANLHIRGWQWWRQ 486 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP IFPYYVTGA+TA GGAWNASIV+E WG + GLGAYIAE+T G+FP ++ Sbjct: 487 IMLPAIFPYYVTGAVTAAGGAWNASIVAEYVQWGDTRVVAHGLGAYIAENTASGNFPNII 546 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 LG+ IM FV NR LW PLY Y R Sbjct: 547 LGIAIMSLFVTLFNRLLWRPLYAYAESRFR 576 >gi|330970284|gb|EGH70350.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 584 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 278/556 (50%), Positives = 373/556 (67%), Gaps = 11/556 (1%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 I + ++G+ + P +++ P++LD LP+YA RTT+RM A+ SL+FTFV ATLAA Sbjct: 39 IGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTMRMFIALAASLIFTFVVATLAA 98 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 KSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ Sbjct: 99 KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278 Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331 E+T SW+ + ++ +G + + + L +I Sbjct: 279 FEQTASSKRPRSWMYSVLGRSRVAPMLG-----------SVLAAPWKCLMLIDGRVISRL 327 Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 ++ V+ +LD W +V + + +I D++ LG TM RV+ Sbjct: 328 WKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDMVTAFGLGLATMVRVI 387 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 VLI++AS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP V + HLNP++W Sbjct: 388 VLIVVASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 LS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+ Sbjct: 448 LSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG+++M FV+A NR Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567 Query: 572 FLWHPLYLYGTRCLRL 587 LW PLY + R L L Sbjct: 568 LLWRPLYGFAERRLSL 583 >gi|302188283|ref|ZP_07264956.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae 642] Length = 584 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 280/556 (50%), Positives = 373/556 (67%), Gaps = 11/556 (1%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 I + ++G + P +++ P++LD LP+YA RTTLRM A+ SL+FTFV ATLAA Sbjct: 39 IGLFIYGFGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIALGASLIFTFVVATLAA 98 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 KSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ Sbjct: 99 KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278 Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331 E+T SW+ L ++ L++ + + L +I + Sbjct: 279 FEQTASSKRPRSWMYSLLGRSRVAPM-----------LASVLAAPWKCLMLIDWRVFSRL 327 Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 ++ ++ +LD W +V + + +I D++ LG TM RV+ Sbjct: 328 WKVKLTPGIARVLDYVWLGLVMAACLAGSVYLFRFIEASLGTSDMVTAFGLGLATMVRVI 387 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP V + HLNP++W Sbjct: 388 VLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 LS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+ Sbjct: 448 LSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG+++M FV+A NR Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567 Query: 572 FLWHPLYLYGTRCLRL 587 LW PLY + R L L Sbjct: 568 LLWRPLYGFAERRLSL 583 >gi|330976362|gb|EGH76419.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 584 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 281/556 (50%), Positives = 373/556 (67%), Gaps = 11/556 (1%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 I + ++G+ + P +++ P++LD LP+YA RTTLRM A+ SL+FTFV ATLAA Sbjct: 39 IGLFIYGLGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIALGASLIFTFVVATLAA 98 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 KSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ Sbjct: 99 KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR Sbjct: 219 AISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278 Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331 E+T SW+ L ++ +G + + + L +I + Sbjct: 279 FEQTASSKRPRSWMYSLLGRSRVAPMLG-----------SVLAAPWKCLMLIDWRVFSRL 327 Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 ++ V+ +LD W +V + + +I D++ LG TM RV+ Sbjct: 328 WKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDMVTAFGLGLATMVRVI 387 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP V + HLNP++W Sbjct: 388 VLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 LS LM GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+ Sbjct: 448 LSPLMGLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG+++M FV+A NR Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567 Query: 572 FLWHPLYLYGTRCLRL 587 LW PLY + R L L Sbjct: 568 LLWRPLYGFAERRLSL 583 >gi|330964413|gb|EGH64673.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 584 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 279/550 (50%), Positives = 368/550 (66%), Gaps = 11/550 (2%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G + P D+++ P++LD LP+YA RTTLRM A+ SL+FTF ATLAAKSR+ Sbjct: 45 GAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFAVATLAAKSRKAE 104 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS +QS Sbjct: 105 QVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFFQS 164 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 T + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR E+T Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFRFEQTAS 284 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 SW+ L ++ LS + + L +I ++ Sbjct: 285 SKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333 Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 V ++D W +V + + +I + D++ LG TM RV+VLI+IA Sbjct: 334 PGVVRVMDYLWLALVMAGCLTASVYLFRFIEASLGFSDMVGAFGLGLATMLRVIVLIVIA 393 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V + HLNP++WLS LM+ Sbjct: 394 SLIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLMV 453 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+ Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG+++M FV+A NR LW PL Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573 Query: 578 YLYGTRCLRL 587 Y + R L L Sbjct: 574 YGFAERRLSL 583 >gi|167835552|ref|ZP_02462435.1| ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 578 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 284/555 (51%), Positives = 372/555 (67%), Gaps = 21/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ ++P DI I+L +LP Y RT LRML+A+ S+ FTF YA LAAKSR Sbjct: 39 GVRQMSLPLDIARPEAISLSPLALPGYVLRTVLRMLAALGASIAFTFAYAPLAAKSRTAE 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTVV+F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 TVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGTTLGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMMSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPG+G+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LHIALPGVGAYVARAIAERDLAAVGWAIAAMTIAITLYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR---TLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + R +LG +R E L Sbjct: 279 GPAPRSWLLDLLHRASLPQRVG-------APLGATLHRAARARLSLGALRLSTRERAL-- 329 Query: 335 CSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 ++R++ I W C V G+A I ++ DV+ V G +T+ RV+V Sbjct: 330 --SRRIA---RIVWLSLCAALAVYAGVALLRIA--APALSWFDVVDVARNGALTLARVLV 382 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+PVG+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 383 LIGVATVVWVPVGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 442 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGA+AFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 443 SPLMILGTQWYILFNVIAGATAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 502 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH + GLGAYIA +T G +P + LGV M V+A+NR Sbjct: 503 ASGGAWNASIVSELVVWGHTTIDAAGLGAYIARTTAAGDYPRIALGVAAMSLLVIAMNRL 562 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 563 IWRPLYAFAERRSRL 577 >gi|66048315|ref|YP_238156.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|63259022|gb|AAY40118.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas syringae pv. syringae B728a] Length = 584 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 277/556 (49%), Positives = 372/556 (66%), Gaps = 11/556 (1%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 I + ++G+ + P +++ P++LD LP+YA RTT+RM A+ SL+FTFV ATLAA Sbjct: 39 IGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTMRMFIALAASLIFTFVVATLAA 98 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 KSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ Sbjct: 99 KSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVECAAIFAIFTSQAWNLA 158 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E Sbjct: 159 FSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACE 218 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 I VGDT + LPGIGS++AL I++++L AI +A+ M VI YDQLLFRP++ W++KFR Sbjct: 219 AISVGDTTVNLPGIGSWLALTIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFR 278 Query: 272 LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331 E+T SW+ + ++ +G + + + L +I Sbjct: 279 FEQTASSKRPRSWMYSVLGRSRVAPMLG-----------SVLAAPWKCLMLIDGRVISRL 327 Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 ++ V+ +LD W +V + + +I D++ LG TM RV+ Sbjct: 328 WKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDMVTAFGLGLATMVRVI 387 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 VLI++AS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP V + HLNP++W Sbjct: 388 VLIVVASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIW 447 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 LS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR + LPG+FPYY+TGA+ Sbjct: 448 LSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRRVALPGVFPYYITGAL 507 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V LG+++M FV+A NR Sbjct: 508 TASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVALGIVVMSVFVIAFNR 567 Query: 572 FLWHPLYLYGTRCLRL 587 LW PLY + R L L Sbjct: 568 LLWRPLYGFAERRLSL 583 >gi|326387996|ref|ZP_08209600.1| binding-protein-dependent transport systems inner membrane component [Novosphingobium nitrogenifigens DSM 19370] gi|326207497|gb|EGD58310.1| binding-protein-dependent transport systems inner membrane component [Novosphingobium nitrogenifigens DSM 19370] Length = 581 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 288/571 (50%), Positives = 367/571 (64%), Gaps = 13/571 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P+ D +AFV++ G+ I + T P + + P+TLD LP YA RT LRM A+ Sbjct: 23 PSREDAIAFVILGGLAAIFFRTAEATVAPLSTLQLEPLTLDPSYLPYYALRTVLRMFVAL 82 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 S +FT V ATLAA+SR LG ++VP LDI+QS+PILGFLTFTV +FM L+PG V+G E Sbjct: 83 FASTVFTLVVATLAARSRHLGQLIVPALDILQSVPILGFLTFTVTFFMGLFPGSVLGVEC 142 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 A+IFAI TSQ WNM FS YQSL IP DLEE + +RLS ++F L +PF+ P LVWN Sbjct: 143 ASIFAILTSQAWNMAFSFYQSLRAIPSDLEEATVIYRLSPIRRFLKLDLPFATPALVWNA 202 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VG T + LPGIGS++ALAI +D LA+ A+ M VI YD Sbjct: 203 MMSMSGGWFFVVASEAITVGKTTVTLPGIGSWLALAIGRRDFLAVGEAVAAMALVIVAYD 262 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QL FRP++ W+++FR E T SWV L R+T L + +PL + +L Sbjct: 263 QLFFRPIVAWADRFRFEMTASAERPRSWVFDLLRRTRLLPVV-------LAPL-GAIGRL 314 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 ++ F + R +L+ W +V A YI+ + DV Sbjct: 315 -----LLAFEPRVGRRKAIGPARSYPLLEKVWQALVIVAATAALVLLSRYIMRSLMWGDV 369 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L + L +TM RV+VLI +AS++W+PVG+WIG RP + ++QP AQ LAAFPANV FP Sbjct: 370 LTAVLLAGLTMIRVMVLIALASLVWVPVGVWIGLRPVWAERLQPLAQFLAAFPANVLFPF 429 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + + L P++WLS LMI GTQWYILFNVIAGASA P D +E A F + GW+WWR Sbjct: 430 AVMAIVRFDLAPDVWLSPLMILGTQWYILFNVIAGASAIPTDLREAAWMFRVRGWQWWRQ 489 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPGIFPYYVTGA+TA GG+WNASIV+E WG+ HL GLG++IAE+T G +P V Sbjct: 490 VALPGIFPYYVTGALTASGGSWNASIVAEAVDWGNRHLVARGLGSFIAEATTAGDYPRVA 549 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FVL NR LW PLY Y R LRL Sbjct: 550 LGIGVMSLFVLGFNRLLWRPLYAYADRRLRL 580 >gi|331017764|gb|EGH97820.1| ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 584 Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust. Identities = 280/550 (50%), Positives = 365/550 (66%), Gaps = 11/550 (2%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G + P D+++ P++LD LP+YA RTTLRM A+ SL+FTFV ATL AKSR+ Sbjct: 45 GAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLGAKSRKAE 104 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQS Sbjct: 105 QVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQS 164 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 T + LPGIGS++ALAI++++L AI +A+ M VI YDQ LFRP++ W++KFR E+T Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQFLFRPIVAWADKFRFEQTAS 284 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 SW+ L + LS + + L +I ++ Sbjct: 285 SKRPRSWMYSLLGGSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333 Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 V ++D W +V + + +I + D++ LG TM RV+VLI IA Sbjct: 334 PGVVRVIDYLWLALVMAGCLTASVYLFHFIEASLGFSDMVGAFGLGLATMLRVIVLIAIA 393 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V + HLNPN+WLS LM+ Sbjct: 394 SVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPNIWLSPLMV 453 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+ Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG+++M FV+A NR LW PL Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573 Query: 578 YLYGTRCLRL 587 Y + R L L Sbjct: 574 YGFAERRLSL 583 >gi|114332379|ref|YP_748601.1| binding-protein-dependent transport systems inner membrane component [Nitrosomonas eutropha C91] gi|114309393|gb|ABI60636.1| binding-protein-dependent transport systems inner membrane component [Nitrosomonas eutropha C91] Length = 579 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 276/535 (51%), Positives = 368/535 (68%), Gaps = 10/535 (1%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+LD +LP+YA RT+LRML AMV+SL+FTF YAT AAKS R +L+P+LDI+QS+P+L Sbjct: 53 ISLDPSALPEYALRTSLRMLLAMVLSLIFTFTYATWAAKSWRAEQILIPLLDILQSVPVL 112 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF++ TVV+F++ PGK++GAELA++FAIFTSQ WNM FS YQSL +PR+L+EVSRSFR Sbjct: 113 GFISITVVFFLSFAPGKMLGAELASVFAIFTSQAWNMAFSFYQSLHTVPRELDEVSRSFR 172 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 LS W +FW L VPF+MP L+WNMMMSMSG WFFVVASE I VGDT++ LPGIGSYIALAI Sbjct: 173 LSPWMRFWKLEVPFAMPALIWNMMMSMSGSWFFVVASEAISVGDTIVTLPGIGSYIALAI 232 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG-IYPADSWVLYLFRKT 292 ++DL AI +A+ ML VI +YDQLLFRP++ W+++FR E+ TG + P SWVL + ++ Sbjct: 233 DQRDLGAIGWAIAVMLIVILIYDQLLFRPLVAWADRFRFEQETGGMPPPHSWVLTVLHRS 292 Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 ++ F + ++ R + F + + +D W+ + Sbjct: 293 QWITFTTALFARIWRWTYRKSQQPARK---------KAFTWKGTGTNLKPWVDWLWYGTI 343 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 V I+W+ +I+ +V ++LG ITM RV VLI +AS+IW+PVG+W+G RP Sbjct: 344 TVVCAIISWKITFFILQEVALAEVGTAMFLGFITMVRVFVLIAVASVIWVPVGVWLGLRP 403 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + QP AQ +AAFPAN+ FP V + L+P++WLS LMI GTQWYILFNVIAGA Sbjct: 404 GAARIAQPIAQFMAAFPANLLFPPAVYGIVVLQLDPDIWLSPLMILGTQWYILFNVIAGA 463 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 S P + +++++ + GW WWR I LP +FP+YVTGAITA GG+WNASIV+E+ SWG Sbjct: 464 STIPGELHDISANLGVRGWLWWRRIALPAVFPFYVTGAITASGGSWNASIVAEIVSWGST 523 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L+ GLGAYI E+T G F V LG+ +M FV+ +NR W PLY R RL Sbjct: 524 TLQAHGLGAYITEATVAGDFHRVALGIAVMSAFVVVINRLFWRPLYALAERKFRL 578 >gi|28199540|ref|NP_779854.1| ABC transporter nitrate permease [Xylella fastidiosa Temecula1] gi|182682275|ref|YP_001830435.1| binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa M23] gi|28057655|gb|AAO29503.1| ABC transporter nitrate permease [Xylella fastidiosa Temecula1] gi|182632385|gb|ACB93161.1| binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa M23] gi|307578552|gb|ADN62521.1| ABC transporter nitrate permease [Xylella fastidiosa subsp. fastidiosa GB514] Length = 584 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 294/576 (51%), Positives = 387/576 (67%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN++DL+A L++ + LLHG + + P + + ++LD LP+Y RTTLRM Sbjct: 19 RAQLPNVYDLVALALILLLGIALLHGAEGASAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +AM SLLFTFV ATLAAKS+R ++VP LD++QS+P+LGFLTFTV +F+ L+PG + Sbjct: 79 FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 GAE A++FA+FTSQ WNM FS YQSL +PRDL+EVSR F S W +FW L VPF+MPGL Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI Q A+ +A+ M +I Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMALLI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQLLFRP++VW++KFR+E T G SWV L +T L+ +PL+ Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLK-------RLVAPLT-- 309 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 +L + + ++R+ L + R S D W V+ VA + + Sbjct: 310 --RLWQRVLILRWTKRNRVTVLPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 +D+ + T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP Q LAAFPAN Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 V FP V + NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A + + W Sbjct: 428 VLFPFAVVAIVSTDANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+ GLG+YIA +TE G Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P V+LGV++M FV NR LW L+++ R LRL Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583 >gi|213968477|ref|ZP_03396620.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301384946|ref|ZP_07233364.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302062022|ref|ZP_07253563.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302134333|ref|ZP_07260323.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926765|gb|EEB60317.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 584 Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust. Identities = 279/550 (50%), Positives = 365/550 (66%), Gaps = 11/550 (2%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G + P +++ P++LD LP+YA RTTLRM A+ SL+FTFV ATLAAKSR+ Sbjct: 45 GASQMLQPIEVLTSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLAAKSRKAE 104 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQS Sbjct: 105 HVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQS 164 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 T + LPGIGS++ALAI++++L AI +A+ M VI YDQ LFRP++ W++KFR E+T Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQFLFRPIVAWADKFRFEQTAS 284 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 SW+ L ++ LS + + L +I ++ Sbjct: 285 SKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333 Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 V ++D W +V + + +I D++ LG TM RV+VLI IA Sbjct: 334 PGVVRVIDYLWLALVMAGCLTASVYLFRFIEASLGLSDMVGAFGLGLATMLRVIVLIAIA 393 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V + HLNP++WLS LM+ Sbjct: 394 SVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLMV 453 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+ Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG+++M FV+A NR LW PL Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573 Query: 578 YLYGTRCLRL 587 Y + R L L Sbjct: 574 YGFAERRLSL 583 >gi|28872656|ref|NP_795275.1| ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855912|gb|AAO58970.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 584 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 279/550 (50%), Positives = 365/550 (66%), Gaps = 11/550 (2%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G + P +++ P++LD LP+YA RTTLRM A+ SL+FTFV ATLAAKSR+ Sbjct: 45 GAGQMLQPIEVLTSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLAAKSRKAE 104 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQS Sbjct: 105 HVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQS 164 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E I VGD Sbjct: 165 LRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVGD 224 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 T + LPGIGS++ALAI++++L AI +A+ M VI YDQ LFRP++ W++KFR E+T Sbjct: 225 TTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQFLFRPIVAWADKFRFEQTAS 284 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 SW+ L ++ LS + + L +I ++ Sbjct: 285 SKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKPT 333 Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 V ++D W +V + + +I D++ LG TM RV+VLI IA Sbjct: 334 PGVVRVIDYLWLALVMAGCLTASVYLFRFIEASLGLSDMVGAFGLGLATMLRVIVLIAIA 393 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V + HLNP++WLS LM+ Sbjct: 394 SVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLMV 453 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG+ Sbjct: 454 LGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGGS 513 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG+++M FV+A NR LW PL Sbjct: 514 WNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRPL 573 Query: 578 YLYGTRCLRL 587 Y + R L L Sbjct: 574 YGFAERRLSL 583 >gi|71899312|ref|ZP_00681473.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Ann-1] gi|71730938|gb|EAO33008.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Ann-1] Length = 584 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 294/576 (51%), Positives = 387/576 (67%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN++DL+A L++ + LLHG + + P + + ++LD LP+Y RTTLRM Sbjct: 19 RAQLPNVYDLVALALILLLGIALLHGAEGASAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +AM SLLFTFV ATLAAKS+R ++VP LD++QS+P+LGFLTFTV +F+ L+PG + Sbjct: 79 FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 GAE A++FA+FTSQ WNM FS YQSL +PRDL+EVSR F S W +FW L VPF+MPGL Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI Q A+ +A+ M +I Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMALLI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQLLFRP++VW++KFR+E T G SWV L +T L+ +PL+ Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQLPRSWVYDLICRTRLLK-------RLVAPLT-- 309 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 +L + + ++R+ L + R S D W V+ VA + + Sbjct: 310 --RLWQRVLILRWTKRNRVTVLPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 +D+ + T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP Q LAAFPAN Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 V FP V + NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A + + W Sbjct: 428 VLFPFAVVAIVSTGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+ GLG+YIA +TE G Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P V+LGV++M FV NR LW L+++ R LRL Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583 >gi|71274644|ref|ZP_00650932.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Dixon] gi|71899643|ref|ZP_00681797.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Ann-1] gi|170730910|ref|YP_001776343.1| putative nitrate transport system permease [Xylella fastidiosa M12] gi|71164376|gb|EAO14090.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Dixon] gi|71730595|gb|EAO32672.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Ann-1] gi|167965703|gb|ACA12713.1| putative nitrate transport system permease protein [Xylella fastidiosa M12] Length = 584 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 295/576 (51%), Positives = 386/576 (67%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN +DL+A L++ + LLHG + P + + ++LD LP+Y RTTLRM Sbjct: 19 RAQLPNAYDLVALALILLLGIALLHGAEGARAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +AM SLLFTFV ATLAAKS+R ++VP LD++QS+P+LGFLTFTV +F+ L+PG + Sbjct: 79 FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 GAE A++FA+FTSQ WNM FS YQSL +PRDL+EVSR F S W +FW L VPF+MPGL Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI Q A+ +A+ M +I Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIANQQFGAVAWAVAAMALLI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQLLFRP++VW++KFR+E T G SWV L +T L+ +PL+ Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLK-------RLVAPLT-- 309 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 +L + + ++R+ L + RV S D W V+ VA + + Sbjct: 310 --RLWQRVLILRWTKRNRVTVLPVSPRVGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 +D+ + T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP Q LAAFPAN Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 V FP V + NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A + + W Sbjct: 428 VLFPFAVVAIVSAGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+ GLG+YIA +TE G Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P V+LGV++M FV NR LW L+++ R LRL Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583 >gi|167579935|ref|ZP_02372809.1| ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 577 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 281/554 (50%), Positives = 364/554 (65%), Gaps = 18/554 (3%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G ++ +P I+L +LP Y RT LRML+A+ S +FTF YA+LAAKSR Sbjct: 38 SGARQMALPLGAARPEAISLSPLALPGYTLRTVLRMLAALGASFVFTFAYASLAAKSRAA 97 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 VL+P+LD++QS+PILG+L+FTVV+F+++ PG GAELAAIFAIFTSQ WNM FS YQ Sbjct: 98 EAVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGSTFGAELAAIFAIFTSQAWNMAFSFYQ 157 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 SL +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I VG Sbjct: 158 SLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMMSMSGGWFFVVASEAISVG 217 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 D I LPG+G+Y+A AI E++L AI +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 218 DLRIALPGVGAYVARAIAERNLAAIGFAIAAMTIAIVLYDQLLFRPMVAWAHKFRCDQTV 277 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR---TLGVIRFHFPENFLQ 333 SW+L L + + + +G +PL + + R +LGV R E + Sbjct: 278 SGPAPRSWLLDLLHRASLPQRVG-------APLGAMLHRAARARLSLGV-RLSARERSMS 329 Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 + + + WF + A+ + ++ DV V G +T+ RV+VL Sbjct: 330 RRAGR-------VVWFSLCAAGALYAGAALLRIAAPALSWSDVADVARNGALTLARVLVL 382 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 I IA+ +W+PVG+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS Sbjct: 383 IGIATAVWVPVGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWLS 442 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR I+LPGI PYYVTGAITA Sbjct: 443 ALMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREIVLPGILPYYVTGAITA 502 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GGAWNASIVSE+ WG L +GLGAY+A +T G +P + LGV M V+A+NR + Sbjct: 503 SGGAWNASIVSELVGWGPTTLDASGLGAYVARTTAAGDYPRIALGVAAMSLLVIAMNRLM 562 Query: 574 WHPLYLYGTRCLRL 587 W PLY + R RL Sbjct: 563 WRPLYAFAERRSRL 576 >gi|83721275|ref|YP_441179.1| ABC transporter permease [Burkholderia thailandensis E264] gi|167618011|ref|ZP_02386642.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257140157|ref|ZP_05588419.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83655100|gb|ABC39163.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 577 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 281/554 (50%), Positives = 363/554 (65%), Gaps = 18/554 (3%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G ++ +P I+L +LP Y RT LRML+A+ S +FTF YA+LAAKSR Sbjct: 38 SGARQMALPLGAARPEAISLSPLALPGYTLRTVLRMLAALGASFVFTFAYASLAAKSRAA 97 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 VL+P+LD++QS+PILG+L+FTVV+F+++ PG GAELAAIFAIFTSQ WNM FS YQ Sbjct: 98 EAVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGSTFGAELAAIFAIFTSQAWNMAFSFYQ 157 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 SL +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I VG Sbjct: 158 SLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMMSMSGGWFFVVASEAISVG 217 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 D I LPG+G+Y+A AI E++L AI +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 218 DLRIALPGVGAYVARAIAERNLAAIGFAIAAMTIAIVLYDQLLFRPMVAWAHKFRCDQTV 277 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR---TLGVIRFHFPENFLQ 333 SW+L L + + + +G +PL + + R +LGV R E L Sbjct: 278 SGPAPRSWLLDLLHRASLPQRVG-------APLGAMLHRAARARLSLGV-RLSARERSLS 329 Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 + + + WF + A+ + ++ DV V G +T+ RV+VL Sbjct: 330 RRAGR-------VVWFSLCAAGALYAGAALLRIAAPALSWSDVADVARNGALTLARVLVL 382 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 I IA+ +W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS Sbjct: 383 IGIATAVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFRLAPAIWLS 442 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR I+LPGI PYYVTGAITA Sbjct: 443 PLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREIVLPGILPYYVTGAITA 502 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GGAWNASIVSE+ WG L +GLGAY+A +T G +P + LGV M V+A+NR + Sbjct: 503 SGGAWNASIVSELVGWGPTTLDASGLGAYVARTTAAGDYPRIALGVAAMSLLVIAMNRLM 562 Query: 574 WHPLYLYGTRCLRL 587 W PLY + R RL Sbjct: 563 WRPLYAFAERRSRL 576 >gi|165919264|ref|ZP_02219350.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|165917058|gb|EDR35662.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] Length = 581 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 284/572 (49%), Positives = 382/572 (66%), Gaps = 12/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM AM Sbjct: 20 PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 80 FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSG W F+ ASE I V + I LPGIGSY ALAI+ + +AI+Y ++TM VI LYD Sbjct: 200 MMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALYD 259 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ +FS L+ N Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFS-LAGNATVN 314 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R + + P ++ N + +L I W ++ GVA + S +I+ + + Sbjct: 315 WR---LFQHRRPRKLIE--PNYQFRRLLTIAWKVLLILGVAAALFLLS-KFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI++E SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LNR +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580 >gi|153206202|ref|ZP_01945465.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212217904|ref|YP_002304691.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] gi|120577332|gb|EAX33956.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012166|gb|ACJ19546.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] Length = 581 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 284/572 (49%), Positives = 382/572 (66%), Gaps = 12/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM AM Sbjct: 20 PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 80 FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSG W F+ ASE I V + I LPGIGSY ALAI+ + +AI+Y ++TM VI LYD Sbjct: 200 MMSMSGSWIFLTASESISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALYD 259 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ +FS L+ N Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFS-LAGNATVN 314 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R + + P ++ N + +L I W ++ GVA + S +I+ + + Sbjct: 315 WR---LFQHRRPRKLIE--PNYQFRRLLTIAWKVLLILGVAAALFLLS-KFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI++E SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LNR +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580 >gi|29655059|ref|NP_820751.1| ABC transporter permease protein [Coxiella burnetii RSA 493] gi|161829804|ref|YP_001597596.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|29542328|gb|AAO91265.1| ABC transporter permease protein [Coxiella burnetii RSA 493] gi|161761671|gb|ABX77313.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] Length = 581 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 282/572 (49%), Positives = 380/572 (66%), Gaps = 12/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM AM Sbjct: 20 PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 80 FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSG W F+ ASE I V + I LPGIGSY ALAI+ + +AI+Y ++TM VI LYD Sbjct: 200 MMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALYD 259 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ +FS N + Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFSLAGNAIVNW 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375 + + P ++ N + +L I W ++ GVA + S +I+ + + Sbjct: 316 R----LFQHRRPRKLIE--PNYQFRRLLTIAWNVLLILGVAAALFLLS-KFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI++E SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LNR +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580 >gi|212211812|ref|YP_002302748.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] gi|212010222|gb|ACJ17603.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] Length = 581 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 280/572 (48%), Positives = 379/572 (66%), Gaps = 12/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM AM Sbjct: 20 PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 80 FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSG W F+ ASE I + + I LPGIGSY ALAI+ + +AI+Y ++ M VI LYD Sbjct: 200 MMSMSGSWIFLTASEAISIANHNIMLPGIGSYTALAIEHANKMAIIYVIVMMFIVIALYD 259 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ +FS N + Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFSSAGNAIVNW 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375 + + P ++ N + +L I W ++ GVA + S +I+ + + Sbjct: 316 R----LFQHRRPRKLIE--PNYQFRRLLTIAWNVLLILGVAAALFLLS-KFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI++E SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LNR +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580 >gi|154705925|ref|YP_001423658.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] gi|154355211|gb|ABS76673.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] Length = 581 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 282/572 (49%), Positives = 379/572 (66%), Gaps = 12/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM AM Sbjct: 20 PNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIAM 79 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 80 FFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPES 139 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 140 AAIFAIFTAQVWNMTLSFYQSLRTVPLDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWNT 199 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSG W F+ ASE I V + I LPGIGSY ALAI+ + +AI+Y ++TM VI LYD Sbjct: 200 MMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALYD 259 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ +FS N + Sbjct: 260 QLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGH----YFSLAGNAIVNW 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFTYQD 375 + + P ++ N + +L I W ++ GVA + S +I+ + + Sbjct: 316 R----LFQHRRPRKLIE--PNYQFRRLLTIAWNVLLILGVAAALFLLS-KFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI+SE SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIISEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LN +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNCTMWRPLYRLAEERFRV 580 >gi|237810965|ref|YP_002895416.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|237503515|gb|ACQ95833.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] Length = 621 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 275/550 (50%), Positives = 361/550 (65%), Gaps = 12/550 (2%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 83 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 142 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 143 AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 202 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 203 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 262 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 263 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 322 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 SW+L L + + + +G +PL + + R + P Sbjct: 323 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGVRLPTR-----GR 370 Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 R + + W + A+ + ++ D+ V G +T+ RV+VLI +A Sbjct: 371 ARAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVA 430 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS LMI Sbjct: 431 TVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWLSPLMI 490 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAITA GGA Sbjct: 491 LGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGA 550 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 WNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR +W PL Sbjct: 551 WNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPL 610 Query: 578 YLYGTRCLRL 587 Y + R RL Sbjct: 611 YAFAERRSRL 620 >gi|126440929|ref|YP_001057811.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126220422|gb|ABN83928.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] Length = 577 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 278/556 (50%), Positives = 366/556 (65%), Gaps = 22/556 (3%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 38 SGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAA 97 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQ Sbjct: 98 QAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQ 157 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 SL +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 158 SLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVG 217 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 218 GLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTV 277 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQ 333 SW+L L + + + +G +PL + + +LGV + Sbjct: 278 SGPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------R 320 Query: 334 LCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 L + R + + W + A+ + ++ D+ V G +T+ RV+ Sbjct: 321 LSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVL 380 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +W Sbjct: 381 VLIGVATVVWVPAGVLIGLRPRATALVQPIAQFLAAFPANLLFPLAVFAIVRFGLAPAIW 440 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 LS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAI Sbjct: 441 LSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAI 500 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 TA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 501 TASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNR 560 Query: 572 FLWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 561 LIWRPLYAFAERRSRL 576 >gi|254181699|ref|ZP_04888296.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|184212237|gb|EDU09280.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 577 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 280/572 (48%), Positives = 374/572 (65%), Gaps = 22/572 (3%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D ++ +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ S Sbjct: 22 DAISALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASF 81 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIF Sbjct: 82 VFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIF 141 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFTSQ WNM FS YQSL +P DL+E S S R +GWQ+FW L VPF+MPGLVWN M+SM Sbjct: 142 AIFTSQAWNMAFSFYQSLRTVPHDLDEASCSLRHTGWQRFWRLEVPFAMPGLVWNAMLSM 201 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 SGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLF Sbjct: 202 SGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLF 261 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLC 317 RPM+ W++KFR ++T SW+L L + + + +G +PL + + Sbjct: 262 RPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARAR 314 Query: 318 RTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 +LGV +L + R + + W + A+ + ++ D Sbjct: 315 ASLGV----------RLSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSD 364 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 + V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FP Sbjct: 365 LADVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFP 424 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR Sbjct: 425 LAVFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWR 484 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + Sbjct: 485 EVMLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRI 544 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV M V+A+NR +W PLY + R RL Sbjct: 545 ALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 >gi|296115222|ref|ZP_06833863.1| binding-protein-dependent transport systems inner membrane component [Gluconacetobacter hansenii ATCC 23769] gi|295978323|gb|EFG85060.1| binding-protein-dependent transport systems inner membrane component [Gluconacetobacter hansenii ATCC 23769] Length = 573 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 289/575 (50%), Positives = 383/575 (66%), Gaps = 13/575 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P R+ PN+FDL+ V+++G L + VP I LD LP YA RT Sbjct: 7 PTHGLRVRPNLFDLVGLVILMGFAVALATVGRHMLVPLSPATAQAIHLDPSWLPGYALRT 66 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 T RM +A++ S++FTF YA AAKSRR G +LVP+LDI+QS+PILGFLTFTVV+F+ L+P Sbjct: 67 TFRMFAALLASVVFTFTYAVWAAKSRRAGQILVPVLDILQSVPILGFLTFTVVFFLGLFP 126 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G+++GAELAAIF IFTSQ WNM FSMYQSL +P DLEE +R F L+ WQ+FW L VPF+ Sbjct: 127 GRMMGAELAAIFTIFTSQAWNMAFSMYQSLRTVPADLEEAARCFGLTAWQRFWRLEVPFA 186 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P LVWN M+SMSGGWF VV SE I VG+T I LPGIGSY+ AI +DLLAILYA++TM Sbjct: 187 IPSLVWNAMISMSGGWFMVVYSETITVGNTDIALPGIGSYVGTAIAHRDLLAILYAIVTM 246 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 L VI YDQLLFRP++ WS +F +E T G D WVL L R+T+ LR Sbjct: 247 LAVILAYDQLLFRPLVAWSARFSIEDTQGEAAPDPWVLALLRRTSLLRRA---------- 296 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 S+ + + +G +R + + + MLDI W+ + G + + + + Y Sbjct: 297 -SDALGRALTFIGWLRIGRAPS--DVTPSHMSGRMLDIAWWACLGGCTLVLGGKVLTYAA 353 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 HFT V V+ LG +T+ RV+V +++AS+IW+PVGIW+G + + Q AQ +AAF Sbjct: 354 GHFTASQVFQVMGLGGLTLLRVLVTLLVASLIWVPVGIWLGLDARRARRAQFVAQFMAAF 413 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PAN+FFPL V + +HLN N+WL+ LM+ GTQWYILFN++AGAS++P D E A +F + Sbjct: 414 PANLFFPLFVLFIVRFHLNSNIWLTPLMLLGTQWYILFNIVAGASSYPTDLLEAARNFQV 473 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 G WW ++LPGI P+++TGAITA GGAWNA+I +E+ASWG LR GLGAYIA++T Sbjct: 474 RGTLWWMRVMLPGIVPFFITGAITASGGAWNAAIATEMASWGSTTLRAQGLGAYIAQATI 533 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G+ V LG+++M FVL NR +W PL Y R Sbjct: 534 DGATDRVGLGMVVMSLFVLLFNRAVWRPLANYAAR 568 >gi|167822873|ref|ZP_02454344.1| putative transmembrane transporter [Burkholderia pseudomallei 9] Length = 577 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 441 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 562 IWRPLYAFAERRSRL 576 >gi|53718355|ref|YP_107341.1| putative transmembrane transporter [Burkholderia pseudomallei K96243] gi|167814398|ref|ZP_02446078.1| putative transmembrane transporter [Burkholderia pseudomallei 91] gi|52208769|emb|CAH34706.1| putative transmembrane transporter [Burkholderia pseudomallei K96243] Length = 577 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 441 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 562 IWRPLYAFAERRSRL 576 >gi|254187628|ref|ZP_04894140.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|157935308|gb|EDO90978.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] Length = 621 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 83 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 142 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 143 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 202 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 203 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 262 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 263 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 322 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 323 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 365 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 366 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 425 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 426 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 485 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 486 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 545 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 546 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 605 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 606 IWRPLYAFAERRSRL 620 >gi|76811160|ref|YP_332348.1| putative transmembrane transporter [Burkholderia pseudomallei 1710b] gi|76580613|gb|ABA50088.1| putative transmembrane transporter [Burkholderia pseudomallei 1710b] Length = 576 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 38 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 97 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 98 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 158 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 217 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 218 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 277 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 278 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 320 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 321 STRGRAWAVRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 380 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 381 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 440 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 441 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 500 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 501 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 560 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 561 IWRPLYAFAERRSRL 575 >gi|78221745|ref|YP_383492.1| binding-protein dependent transport system inner membrane protein [Geobacter metallireducens GS-15] gi|78193000|gb|ABB30767.1| Binding-protein-dependent transport systems inner membrane component [Geobacter metallireducens GS-15] Length = 579 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 291/583 (49%), Positives = 379/583 (65%), Gaps = 19/583 (3%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRT 68 F + PN +DL AF LV+GII +L G +E +P VP ++ D LP YA RT Sbjct: 10 FRGKLTTPNAWDLAAFFLVMGIIALLAWGSREMALPYVPGKTVPSLSPDPWHLPYYALRT 69 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 +RM +A+ +SL FT YATLAAKSRRLG +LVP LDI+QS+PILGFL+ TV F++L+P Sbjct: 70 VIRMGAALGLSLAFTLTYATLAAKSRRLGPILVPALDILQSVPILGFLSVTVTGFISLFP 129 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G ++G E A+IFAIFTSQ WNM FS YQS+ +P+DL E + F LS W++FW + PF Sbjct: 130 GSLLGVEAASIFAIFTSQAWNMAFSFYQSMKTVPKDLGEAATIFGLSPWKRFWRVEAPFG 189 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P L+WN+MMS+SGGWFFVVASE I VG T + LPGIGSY+ALAI QDL AI +A+ TM Sbjct: 190 VPPLIWNIMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYMALAIHRQDLGAIGWALATM 249 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT----NFLRFIGYSSWN 304 VIFLYDQL FRP++ W+ KFR+E T P +SW+L +F +T LR IG Sbjct: 250 ALVIFLYDQLFFRPLVAWAEKFRVELTESGAPPESWLLTIFTRTRLMGRLLRLIGALPAR 309 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 + R+ IR PE V +D W + A+ W+ + Sbjct: 310 LAERFPRRRRLPRRSRYPIR---PE----------VQRTIDRAWNAIFALAALYGLWK-L 355 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 V+ ++VL V LG T+ RV VL+ +AS++WIPVG+ IG P ++++QP AQ Sbjct: 356 ATFVSVIPLREVLSVFGLGLATLARVTVLLALASLLWIPVGVRIGLNPRWATRVQPVAQF 415 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+FFP+VV + + LNP +W + LMI GTQWYILFNVIAGASA PND +E A+ Sbjct: 416 LAAFPANLFFPVVVVLIVRFRLNPEIWTAPLMILGTQWYILFNVIAGASAIPNDLREAAT 475 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + ++GW WR ++LPGIFP VTG +TA GG WNASIV+E+ SWG L TGLG+ IA Sbjct: 476 NLGLSGWELWRRLLLPGIFPSLVTGLVTASGGTWNASIVAEMVSWGPTTLTATGLGSAIA 535 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 TE+G +P +VLG+ +M FV+ LNR W LYL RL Sbjct: 536 RWTEQGDYPHIVLGIAVMSIFVVCLNRLFWRRLYLLAQTRYRL 578 >gi|126452920|ref|YP_001065052.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242317395|ref|ZP_04816411.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|126226562|gb|ABN90102.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242140634|gb|EES27036.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b] Length = 577 Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWL 441 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 562 IWRPLYAFAERRSRL 576 >gi|254260499|ref|ZP_04951553.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254219188|gb|EET08572.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 577 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 322 STRGRAWAVRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 441 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 562 IWRPLYAFAERRSRL 576 >gi|226196748|ref|ZP_03792328.1| ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|225931279|gb|EEH27286.1| ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] Length = 577 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWL 441 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVI+GASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 442 SPLMILGTQWYILFNVISGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 502 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 562 IWRPLYAFAERRSRL 576 >gi|254196922|ref|ZP_04903346.1| ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|169653665|gb|EDS86358.1| ABC transporter, permease protein [Burkholderia pseudomallei S13] Length = 621 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/555 (49%), Positives = 365/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 83 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 142 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 143 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 202 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 203 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 262 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 263 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 322 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 323 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 365 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 366 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 425 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 426 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWL 485 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 486 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 545 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 546 ASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 605 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 606 IWRPLYAFAERRSRL 620 >gi|167892962|ref|ZP_02480364.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894] Length = 577 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 281/557 (50%), Positives = 367/557 (65%), Gaps = 26/557 (4%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321 Query: 335 CSNQR--VSYMLDIFWF--CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 + R + + W C V GIA + ++ D+ V G +T+ RV Sbjct: 322 STRGRAWAGRIARVAWLAPCSAAAVYAGIAL--LRTTAPALSWSDLADVARNGALTLARV 379 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 +VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P + Sbjct: 380 LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAI 439 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGA Sbjct: 440 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 499 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+N Sbjct: 500 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMN 559 Query: 571 RFLWHPLYLYGTRCLRL 587 R +W PLY + R RL Sbjct: 560 RLIWRPLYAFAERRSRL 576 >gi|217420095|ref|ZP_03451601.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217397399|gb|EEC37415.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 577 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 281/557 (50%), Positives = 367/557 (65%), Gaps = 26/557 (4%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321 Query: 335 CSNQR--VSYMLDIFWF--CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 + R + + W C V GIA + ++ D+ V G +T+ RV Sbjct: 322 STRGRAWAGRIARVAWLAPCSAAAVYAGIAL--LRTTAPALSWSDLADVARNGALTLARV 379 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 +VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P + Sbjct: 380 LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAI 439 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGA Sbjct: 440 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 499 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+N Sbjct: 500 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMN 559 Query: 571 RFLWHPLYLYGTRCLRL 587 R +W PLY + R RL Sbjct: 560 RLIWRPLYAFAERRSRL 576 >gi|134279659|ref|ZP_01766371.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167901440|ref|ZP_02488645.1| putative transmembrane transporter [Burkholderia pseudomallei NCTC 13177] gi|134248859|gb|EBA48941.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] Length = 577 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/555 (49%), Positives = 364/555 (65%), Gaps = 22/555 (3%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS---NNVKKLCRTLGVIRFHFPENFLQL 334 SW+L L + + + +G +PL + + +LGV +L Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAARARASLGV----------RL 321 Query: 335 CSNQR--VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 + R + + W + A+ + ++ D+ V G +T+ RV+V Sbjct: 322 STRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLV 381 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WL Sbjct: 382 LIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWL 441 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAIT Sbjct: 442 SPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAIT 501 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE+ WGH GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 502 ASGGAWNASIVSELVVWGHTTRDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRL 561 Query: 573 LWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 562 IWRPLYAFAERRSRL 576 >gi|54293082|ref|YP_125497.1| hypothetical protein lpl0120 [Legionella pneumophila str. Lens] gi|54296116|ref|YP_122485.1| hypothetical protein lpp0135 [Legionella pneumophila str. Paris] gi|296105630|ref|YP_003617330.1| ABC transporter, permease protein [Legionella pneumophila 2300/99 Alcoy] gi|53749901|emb|CAH11283.1| hypothetical protein lpp0135 [Legionella pneumophila str. Paris] gi|53752914|emb|CAH14350.1| hypothetical protein lpl0120 [Legionella pneumophila str. Lens] gi|295647531|gb|ADG23378.1| ABC transporter, permease protein [Legionella pneumophila 2300/99 Alcoy] gi|307608865|emb|CBW98263.1| hypothetical protein LPW_01211 [Legionella pneumophila 130b] Length = 579 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 274/572 (47%), Positives = 377/572 (65%), Gaps = 14/572 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P SR F N +DLL +L ++ L + P + D +PI+L+ +LP YA R Sbjct: 11 PDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALR 68 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LRM A++ S+LFTF+ LAAK+RR +++P +DI+QSIP+L FL+ TV F++L+ Sbjct: 69 TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLF 128 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E A+IFAIF++QVWNMTF YQSL +P DL EVS FRLS WQ+FW + VPF Sbjct: 129 PNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFWKVEVPF 188 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 SM GL+WNMM+SMS WFFVV SE I V I LPG+GSYIALAI ++DL A+ YA+LT Sbjct: 189 SMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAVGYAILT 248 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ VIFLYDQ+LFRP+I WS KF++E++ SW++ L R + ++ + + W + Sbjct: 249 MVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRV--TEW--LA 304 Query: 308 PLSNN-VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +N+ V +G ++ +F + LD W +V I W + + Sbjct: 305 VFTNSFVNARWLRIGEVKAVKEIDF-------KRQKRLDRLWTALVLIAVITGGWFLLKF 357 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I+ D+ +V LG T RV++LI+++S++WIPVG+WIG RP ++ KIQP Q +A Sbjct: 358 ILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPIIQFVA 417 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN+F+PL V + ++L+ +W++ LMI GTQWYILFNVIAGAS+ P D A +F Sbjct: 418 AFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNF 477 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E SWG+I L+ TGLG YI S Sbjct: 478 GLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQAS 537 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 T G FP++ LG +MC +VLA N +W PLY Sbjct: 538 TTAGDFPQIALGTAMMCVYVLAFNHLIWRPLY 569 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 18/209 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R+ + +I + + VG + P +L + P F L ++ + H Sbjct: 69 TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSF--LSITVTGFIH 126 Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498 L PN L S+ IF Q W + F P+D EV++ F ++ W R+W+ + Sbjct: 127 LFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFWKVEV 186 Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 P+ ++G + + +W ++SE S H ++R G+G+YIA + + Sbjct: 187 -----PFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHA 241 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M + ++ L+ PL + + Sbjct: 242 VGYAILTMVIVIFLYDQILFRPLIAWSEK 270 >gi|52840376|ref|YP_094175.1| ABC transporter, permease protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627487|gb|AAU26228.1| ABC transporter, permease protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 579 Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust. Identities = 274/572 (47%), Positives = 377/572 (65%), Gaps = 14/572 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P SR F N +DLL +L ++ L + P + D +PI+L+ +LP YA R Sbjct: 11 PDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALR 68 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LRM A++ S+LFTF+ LAAK+RR +++P +DI+QSIP+L FL+ TV F++L+ Sbjct: 69 TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLF 128 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E A+IFAIF++QVWNMTF YQSL +P DL EVS FRLS WQ+FW + VPF Sbjct: 129 PNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFWKVEVPF 188 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 SM GL+WNMM+SMS WFFVV SE I V I LPG+GSYIALAI ++DL A+ YA+LT Sbjct: 189 SMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAVGYAILT 248 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ VIFLYDQ+LFRP+I WS KF++E++ SW++ L R + ++ + + W + Sbjct: 249 MVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRV--TEW--LA 304 Query: 308 PLSNN-VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +N+ V +G ++ +F + LD W +V I W + + Sbjct: 305 VFTNSFVNARWLRIGEVKAVKEIDF-------KRQKRLDRLWTALVLIAVITGGWFLLKF 357 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I+ D+ +V LG T RV++LI+++S++WIPVG+WIG RP ++ KIQP Q +A Sbjct: 358 ILAELKVSDIFHVFLLGAATGSRVIILILLSSMLWIPVGVWIGLRPRLAQKIQPIIQFVA 417 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN+F+PL V + ++L+ +W++ LMI GTQWYILFNVIAGAS+ P D A +F Sbjct: 418 AFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNF 477 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E SWG+I L+ TGLG YI S Sbjct: 478 GLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQAS 537 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 T G FP++ LG +MC +VLA N +W PLY Sbjct: 538 TTAGDFPQIALGTAMMCVYVLAFNHLIWRPLY 569 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 18/209 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R+ + +I + + VG + P +L + P F L ++ + H Sbjct: 69 TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSF--LSITVTGFIH 126 Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498 L PN L S+ IF Q W + F P+D EV++ F ++ W R+W+ + Sbjct: 127 LFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFWKVEV 186 Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 P+ ++G + + +W ++SE S H ++R G+G+YIA + + Sbjct: 187 -----PFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHA 241 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M + ++ L+ PL + + Sbjct: 242 VGYAILTMVIVIFLYDQILFRPLIAWSEK 270 >gi|148358279|ref|YP_001249486.1| ABC transporter permease [Legionella pneumophila str. Corby] gi|148280052|gb|ABQ54140.1| ABC transporter, permease protein [Legionella pneumophila str. Corby] Length = 579 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 273/572 (47%), Positives = 376/572 (65%), Gaps = 14/572 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P SR F N +DLL +L ++ L + P + D +PI+L+ +LP YA R Sbjct: 11 PDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALR 68 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LRM A++ S+LFTF+ LAAK+RR +++P +DI+QSIP+L FL+ TV F++L+ Sbjct: 69 TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLF 128 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E A+IFAIF++QVWNMTF YQSL +P DL EVS RLS WQ+FW + VPF Sbjct: 129 PNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMLRLSAWQRFWKVEVPF 188 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 SM GL+WNMM+SMS WFFVV SE I V I LPG+GSYIALAI ++DL A+ YA+LT Sbjct: 189 SMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAVGYAILT 248 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ VIFLYDQ+LFRP+I WS KF++E++ SW++ L R + ++ + + W + Sbjct: 249 MVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRV--TEW--LA 304 Query: 308 PLSNN-VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +N+ V +G ++ +F + LD W +V I W + + Sbjct: 305 VFTNSFVNARWLRIGEVKAVKEIDF-------KRQKRLDRLWTALVLIAVITGGWFLLKF 357 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I+ D+ +V LG T RV++LI+++S++WIPVG+WIG RP ++ KIQP Q +A Sbjct: 358 ILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPIIQFVA 417 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN+F+PL V + ++L+ +W++ LMI GTQWYILFNVIAGAS+ P D A +F Sbjct: 418 AFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNF 477 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E SWG+I L+ TGLG YI S Sbjct: 478 GLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQAS 537 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 T G FP++ LG +MC +VLA N +W PLY Sbjct: 538 TTAGDFPQIALGTAMMCVYVLAFNHLIWRPLY 569 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 18/209 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R+ + +I + + VG + P +L + P F L ++ + H Sbjct: 69 TVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSF--LSITVTGFIH 126 Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498 L PN L S+ IF Q W + F P+D EV++ ++ W R+W+ + Sbjct: 127 LFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMLRLSAWQRFWKVEV 186 Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 P+ ++G + + +W ++SE S H ++R G+G+YIA + + Sbjct: 187 -----PFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHA 241 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M + ++ L+ PL + + Sbjct: 242 VGYAILTMVIVIFLYDQILFRPLIAWSEK 270 >gi|326403633|ref|YP_004283715.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325050495|dbj|BAJ80833.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 577 Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust. Identities = 292/577 (50%), Positives = 384/577 (66%), Gaps = 12/577 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P + R PN +D+ A LV ++ + H Q T P + I L+ LP YA R Sbjct: 7 PALVHGRRLPNTWDVAAMALVFALLIGVAHVAQGTMAPLARMKSGHIHLNPAWLPGYALR 66 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM +A+++SL FTF ATLAAKSRR ++++PILDI+QSIPILGF++FTV++F++L+ Sbjct: 67 TTLRMFAALLVSLGFTFTVATLAAKSRRAAIIIIPILDILQSIPILGFISFTVLFFLHLF 126 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ +GAELA +F IFTSQ WNM FS YQSL P DL E RSF L+ WQ+FW L VPF Sbjct: 127 PGQELGAELAVVFVIFTSQAWNMAFSFYQSLTTEPADLVEACRSFGLTPWQRFWRLDVPF 186 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++PGLVWN M+SMSGGWFFVVASE I VG T LPGIGSY+A+A++ +D AI+YA+L Sbjct: 187 AVPGLVWNTMLSMSGGWFFVVASEAITVGHTTFTLPGIGSYVAVALQHRDFAAIVYALLA 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ML VI LYDQLLFRP++ WS KFR E + WVL L R+T LR G W Sbjct: 247 MLVVILLYDQLLFRPLVAWSGKFRFETVPSAGETEPWVLRLLRRTFLLRAAG--DW---- 300 Query: 308 PLSNNVKKLCR-TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 LS+ + R LG F L + + + D ++ VV A A Q + + Sbjct: 301 -LSDQFAHVVRLRLGRADRKFGSAGLDRATGR----IGDAAFYAVVIIAAGAAAAQVVEF 355 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + D+ + L T+ RV+ ++I+ +IW+PVG+W+GFRP + +QP AQ LA Sbjct: 356 CARTMYWSDLAQCVVLAFYTLARVIAALVISCVIWVPVGVWVGFRPWATRLVQPAAQFLA 415 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN+ FP+VV+ + ++ L PN+WL+ LMI GTQWY+LFNV+AGA+A P D KE AS+F Sbjct: 416 AFPANLVFPVVVAGIVHFRLTPNIWLTPLMILGTQWYVLFNVVAGAAALPGDLKEAASNF 475 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 ++G WWR +I+PGI PY+VTGA+TA G AWNASIV+EVASWGH L GLGAYIA++ Sbjct: 476 RLSGLLWWRRLIIPGILPYFVTGALTATGAAWNASIVAEVASWGHTTLVARGLGAYIAQA 535 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 T G+ +VLGV +M FVL NR +W PLY Y +R Sbjct: 536 TMAGNTSRIVLGVAVMAAFVLGFNRLVWRPLYAYASR 572 >gi|330994257|ref|ZP_08318185.1| Glycine betaine/L-proline transport system permease protein proW [Gluconacetobacter sp. SXCC-1] gi|329758724|gb|EGG75240.1| Glycine betaine/L-proline transport system permease protein proW [Gluconacetobacter sp. SXCC-1] Length = 572 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 281/581 (48%), Positives = 376/581 (64%), Gaps = 35/581 (6%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN+ DLL + ++ ++ + VP + I L LP YA RTTLRM Sbjct: 11 RVRPNLADLLGLLAIMAGAAVIATAGRHMLVPIPASETGTIHLSPAWLPAYAVRTTLRMF 70 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A+ SL+FTF YA AAKSRR VL+P+LDI+QS+PILGFLTFTVV+F+ L+PG+++G Sbjct: 71 AALAASLVFTFTYAVWAAKSRRAAQVLIPLLDILQSVPILGFLTFTVVFFLGLFPGRMMG 130 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIF IFTSQ WNM F+MYQ+L +P DLEE +R F L+ WQ+FW L VPF++P LV Sbjct: 131 AELAAIFTIFTSQAWNMAFAMYQALRTVPPDLEEAARCFGLTPWQRFWRLEVPFAIPSLV 190 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN M+SMSGGWF VV SE I VG T I LPGIGSY+ +AI+++++ AI YA++ ML VI Sbjct: 191 WNTMISMSGGWFMVVYSETITVGSTDIALPGIGSYVGVAIEQRNIGAIFYAIIAMLAVIT 250 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVL-----------YLFRKTNFLRFIGYSS 302 +YDQLLFRP++ WS +F + + D WVL + R + + IG Sbjct: 251 IYDQLLFRPLVAWSARFSTDDGATMAAPDPWVLTLLRRTHLLRQFCLRLGDTMTRIG--- 307 Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362 W P R +R P S ++D W + A+ I W+ Sbjct: 308 WLAIGP---------RPSQPVRAIIP------------SRLMDGAWGMALAVCALTIGWK 346 Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + Y +H++ VL+V+ LG IT+ RV+ +I+AS++W+P+GIW+G P + Q A Sbjct: 347 TWTYGSSHYSVAQVLHVVMLGGITLLRVMGTVIVASLVWVPLGIWLGLSPRRARHAQMAA 406 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q +AAFPAN+FFPL+V + ++HLN N+WL+ LM+ GTQWYILFN++AGAS++P D E Sbjct: 407 QFMAAFPANLFFPLMVIGIVHWHLNSNIWLTPLMLLGTQWYILFNIVAGASSYPGDLLEA 466 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A +FH+ GW WWR I+LPGI PY++TGA+TA GGAWNA+I +EVASWG L GLGAY Sbjct: 467 ARNFHVRGWLWWRRIMLPGIMPYFITGALTASGGAWNAAIATEVASWGDTTLSAQGLGAY 526 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 IA +T G+ V LG+ IM FVL LNR LW PL Y R Sbjct: 527 IAHATVAGATDRVGLGMAIMAGFVLLLNRVLWRPLANYAAR 567 >gi|148260439|ref|YP_001234566.1| binding-protein-dependent transport systems inner membrane component [Acidiphilium cryptum JF-5] gi|146402120|gb|ABQ30647.1| binding-protein-dependent transport systems inner membrane component [Acidiphilium cryptum JF-5] Length = 577 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 292/577 (50%), Positives = 384/577 (66%), Gaps = 12/577 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P + R PN +D+ A LV ++ + H Q T P + I L+ LP YA R Sbjct: 7 PALVHGRRLPNTWDVAAMALVFALLIGVAHVAQGTMAPLARMKSGHIHLNPAWLPGYALR 66 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM +A+++SL FTF ATLAAKSRR ++++PILDI+QSIPILGF++FTV++F++L+ Sbjct: 67 TTLRMFAALLVSLGFTFTVATLAAKSRRAAIIIIPILDILQSIPILGFISFTVLFFLHLF 126 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ +GAELA +F IFTSQ WNM FS YQSL P DL E RSF L+ WQ+FW L VPF Sbjct: 127 PGQELGAELAVVFVIFTSQAWNMAFSFYQSLTTEPADLVEACRSFGLTPWQRFWRLDVPF 186 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++PGLVWN M+SMSGGWFFVVASE I VG T LPGIGSY+A+A++ +D AI+YA+L Sbjct: 187 AVPGLVWNTMLSMSGGWFFVVASEAITVGHTTFTLPGIGSYVAVALQHRDFAAIVYALLA 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ML VI LYDQLLFRP++ WS KFR E + WVL L R+T LR G W Sbjct: 247 MLVVILLYDQLLFRPLVAWSGKFRFETVPSAGETEPWVLRLLRRTFLLRAAG--DW---- 300 Query: 308 PLSNNVKKLCR-TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 LS+ + R LG F L + + + D ++ VV A A Q + + Sbjct: 301 -LSDQFAHVVRLRLGRADRKFGSAGLDRATGR----IGDAAFYAVVIIAAGAAAAQVVEF 355 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + D+ + L T+ RV+ ++I+ +IW+PVG+W+GFRP + +QP AQ LA Sbjct: 356 CARTMYWSDLAQCVVLAFYTLARVIAALVISCVIWVPVGVWVGFRPWATRLVQPAAQFLA 415 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN+ FP+VV+ + ++ L PN+WL+ LMI GTQWY+LFNV+AGA+A P D KE AS+F Sbjct: 416 AFPANLVFPVVVAGIVHFRLAPNIWLTPLMILGTQWYVLFNVVAGAAALPGDLKEAASNF 475 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 ++G WWR +I+PGI PY+VTGA+TA G AWNASIV+EVASWGH L GLGAYIA++ Sbjct: 476 RLSGLLWWRRLIIPGILPYFVTGALTATGAAWNASIVAEVASWGHTTLVARGLGAYIAQA 535 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 T G+ +VLGV +M FVL NR +W PLY Y +R Sbjct: 536 TMAGNTSRIVLGVAVMAAFVLGFNRLVWRPLYAYASR 572 >gi|172065456|ref|YP_001816168.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gi|171997698|gb|ACB68615.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 577 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 278/574 (48%), Positives = 381/574 (66%), Gaps = 18/574 (3%) Query: 17 PNIFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 P DL+A ++V+G + LL GI + P + I+L +LP Y RT RM + Sbjct: 18 PGWRDLVATLIVVGFL--LLAGIWAHQMAGPLTVAHPPAISLSPAALPGYTLRTVARMFA 75 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++ S+ FTFV+AT AA+SRR +L+P+LD +QS+PILG+L+FTV+ F++L+PG+++GA Sbjct: 76 ALLASIAFTFVFATAAARSRRAERMLIPLLDALQSVPILGYLSFTVLVFLSLFPGRILGA 135 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIFTSQ WNMTFS YQ+L +P DL+E SRSFRLS WQ+FW L VPF+MPGLVW Sbjct: 136 ECAAIFAIFTSQAWNMTFSFYQALRTVPLDLDETSRSFRLSAWQRFWRLDVPFAMPGLVW 195 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 N MMSMSGGWFFVVASE I VG+ + LPG+G+Y+A AI +DL A+ +A++ M+ I L Sbjct: 196 NAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMIVAIVL 255 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQLLFRP++ WS +FR + SW+L LF+++ R++ +S P+ + Sbjct: 256 YDQLLFRPLVSWSERFRYGDAAPAIASRSWMLDLFQRS---RWVARAS----GPVRALLH 308 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHFTY 373 + R +R P ++ + D+ WF +CG A++ T+ Sbjct: 309 RAARAR--LRGFTPAWRGRIALPRHTG---DVLWFA-MCGAGCAYAAYELFRLGRTTLTW 362 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D+ V G +T RV VL+++AS++W+P+GI IG RP ++++IQP Q LAAFPAN+ Sbjct: 363 TDLRVVAAAGALTFARVTVLVMLASVLWVPIGISIGLRPDVAARIQPVTQFLAAFPANLL 422 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + L P++WL LLMI G QWY+LFNVIAGASAFP D +E A+ F + W Sbjct: 423 FPVAVFAIVRLRLAPDIWLCLLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPVTW 482 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ++LPG+ PY+VTGAITA GGAWNASIV+E SWG+ L GLGAYIA T+ G +P Sbjct: 483 WRRVMLPGVLPYFVTGAITASGGAWNASIVAEAVSWGNTRLNAGGLGAYIARMTDAGDYP 542 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + LGV +M FV+A NRF+W PLY + R RL Sbjct: 543 RIALGVAVMSLFVIATNRFVWRPLYAFAERRTRL 576 >gi|298506983|gb|ADI85706.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 578 Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust. Identities = 284/576 (49%), Positives = 375/576 (65%), Gaps = 17/576 (2%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQE---TTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 PN++D+ AF+LV+G++ +L G +E T VP IV ++LD LP YA RT +RM Sbjct: 15 LPNLWDVAAFLLVLGVVALLAWGSREMAATFVPGKIVP--SLSLDPRHLPYYALRTVIRM 72 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +A+ +SL FT Y TLAAKSRRL +LVP LDI+QS+PILGFL+ TV F+ L+PG ++ Sbjct: 73 GAALCLSLAFTLTYGTLAAKSRRLSPILVPTLDILQSVPILGFLSVTVTGFIALFPGSLM 132 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNM FS YQSL IPRDL E + F LSGWQ+FW + PF++P L Sbjct: 133 GVEAASIFAIFTSQAWNMAFSFYQSLKTIPRDLGEAATLFGLSGWQRFWRVEAPFAVPPL 192 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 VWN+MMS+SGGWFFVVASE I VG T + LPGIGSY+ALAI QD+ AI +A+ TML VI Sbjct: 193 VWNIMMSVSGGWFFVVASEAITVGKTAVTLPGIGSYVALAIHRQDMGAIAWALATMLAVI 252 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSN 311 LYDQL FRP++ W+ KFR+E + +SW L LF +T FL R + + Sbjct: 253 LLYDQLFFRPLVAWAEKFRVELSQARIAPESWCLTLFARTRFLARALSLAGALPELLTER 312 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 ++ G R + + ++D W A+ W+ + V+ Sbjct: 313 LPRRRRPRTGEHRHR----------GRPAARIMDRIWNAAFAVAALWALWK-LARFVSVI 361 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + ++L V LG TM RV VL+I+AS+ W+P+G+ IG P ++++QP AQ LAAFPAN Sbjct: 362 PFGEILSVFGLGLATMARVAVLLIMASLFWVPIGVTIGLNPRWTTRVQPVAQFLAAFPAN 421 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP V + + LNP +W + LMI GTQWYILFNVIAGASA PND +E A++ ++GW Sbjct: 422 LLFPAAVVLIVRFRLNPEIWTAPLMILGTQWYILFNVIAGASAIPNDLREAAANLGLSGW 481 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WR ++LPGIFP +TG +TA GG WNASIV+EV SWG L TGLG+ IA TE+G Sbjct: 482 ELWRRLLLPGIFPSLITGLVTASGGTWNASIVAEVVSWGPTTLTATGLGSAIARWTEQGD 541 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P +VLG+ +M +V+ LNRF W LYL RL Sbjct: 542 YPHIVLGIAVMSMYVVCLNRFFWRRLYLLAQTRYRL 577 >gi|299065148|emb|CBJ36312.1| Putative binding-protein-dependent transporter [Ralstonia solanacearum CMR15] Length = 585 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 276/577 (47%), Positives = 376/577 (65%), Gaps = 23/577 (3%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVVQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLF+F +A +A+++R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ S L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVK----------SLLERTAALA 315 Query: 317 CRTL--GVIRFH----FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 RTL G R F++L RV+ D+ ++ A+ W + ++ + Sbjct: 316 ERTLAWGAERTRPKASGSNGFVRLPWAGRVA---DV----IILLAALAAVWHILQFVRSE 368 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + +V V+WLG +TM RV+VLI +A++IW+P+GI IG P+++ QP AQ LAAFPA Sbjct: 369 VGWGEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFPA 428 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FPLVV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + + A + + G Sbjct: 429 NLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNLGLRG 488 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W W+ ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG Sbjct: 489 WLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKG 548 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP + LG+ +M FV+ NR LW+ LY RL Sbjct: 549 DFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 585 >gi|300689778|ref|YP_003750773.1| binding-protein-dependent transporter [Ralstonia solanacearum PSI07] gi|299076838|emb|CBJ49450.1| Putative binding-protein-dependent transporter [Ralstonia solanacearum PSI07] Length = 586 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 277/578 (47%), Positives = 375/578 (64%), Gaps = 24/578 (4%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLF+F +A +A+++R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315 Query: 317 CRTL--GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV-----AIGIAWQSIGYIVN 369 RTL G R P+ + R+ W V V A+ AW + ++ + Sbjct: 316 ERTLAWGAERTR-PKAHTNNSGSPRLP------WAGRVADVIILLIALAAAWHILQFVRS 368 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +V V+WLG +TM RV+VLI +A++IW+P+GI IG P+++ QP AQ LAAFP Sbjct: 369 EVGWSEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFP 428 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 AN+ FPLVV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + + A +F + Sbjct: 429 ANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNFGLR 488 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 GW W+ ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T K Sbjct: 489 GWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAK 548 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G FP + LG+ +M FV+ NR LW+ LY RL Sbjct: 549 GDFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 586 >gi|254497295|ref|ZP_05110103.1| ABC transporter, permease protein [Legionella drancourtii LLAP12] gi|254353523|gb|EET12250.1| ABC transporter, permease protein [Legionella drancourtii LLAP12] Length = 580 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 273/568 (48%), Positives = 369/568 (64%), Gaps = 20/568 (3%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 F N +DLL +L+ ++ L + P + D +PI+L +LP YA RT LR+ A Sbjct: 18 FINRWDLLLLILIFAVLFFLGWAGSQMATPYQLGDQIPISLVPENLPFYALRTVLRLFIA 77 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 + S+LFTF LAAK+RR V++P +DI+QSIP+L FL+ TV F++L+P ++G E Sbjct: 78 LFFSILFTFAVGLLAAKNRRAEQVIIPAIDILQSIPVLSFLSITVTGFIHLFPHSLLGPE 137 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 A+IFAIF +QVWNMTF YQSL IP DL+EV+ FRLS WQ+FW L VPFSM GL+WN Sbjct: 138 CASIFAIFCAQVWNMTFGFYQSLKTIPHDLQEVAAMFRLSAWQRFWKLEVPFSMSGLLWN 197 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MM+SMS WFFVV SE I V I LPGIGSYIALAI+++DL A+ YA+LTM+ VIFLY Sbjct: 198 MMISMSASWFFVVLSEAISVAHQNIRLPGIGSYIALAIQQRDLHAVGYAILTMVIVIFLY 257 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 DQ+LFRP+I WS KF+ E + SW++ R + ++ F+ + + Sbjct: 258 DQILFRPLIAWSEKFKFEPSPDESEYQSWLVDWIRCSRLMK--------RFTEIIDIFTN 309 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW-----FCVVCGVAIGIAWQSIGYIVNH 370 R P+ ++ + + +D FW FCV+ G W + +I+ Sbjct: 310 SFVNARWFRIGEPKAIKEI--DFKRQKRIDRFWSTMVLFCVLSG-----GWFLLRFILAE 362 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 D+L+V LG T RV+ LI+++S+IWIPVG+WIG RP I+ +IQP Q +AAFPA Sbjct: 363 LKVSDILHVFLLGAATGTRVIALIVLSSLIWIPVGVWIGLRPRIAQRIQPVIQFVAAFPA 422 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+F+PL V + ++LN +W++ LMI GTQWYILFNVIAGAS P + A +F + G Sbjct: 423 NLFYPLFVIAIVEFNLNVEIWVTPLMILGTQWYILFNVIAGASTIPRELYLAADNFGLKG 482 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W WW+ ++LPGIFP+Y+TGAITA GGAWNASIV+E SWG++ L+ TGLGAYI ST G Sbjct: 483 WLWWKRLVLPGIFPFYITGAITAAGGAWNASIVAEWVSWGNVTLKATGLGAYIQASTTIG 542 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLY 578 FP++ LG +MC +VL N +W PLY Sbjct: 543 DFPQIALGTAMMCLYVLTFNHLIWRPLY 570 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 18/209 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R+ + + + + VG+ I P +L + P F L ++ + H Sbjct: 70 TVLRLFIALFFSILFTFAVGLLAAKNRRAEQVIIPAIDILQSIPVLSF--LSITVTGFIH 127 Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498 L P+ L S+ IF Q W + F P+D +EVA+ F ++ W R+W+ + Sbjct: 128 LFPHSLLGPECASIFAIFCAQVWNMTFGFYQSLKTIPHDLQEVAAMFRLSAWQRFWKLEV 187 Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 P+ ++G + + +W ++SE S H ++R G+G+YIA + ++ Sbjct: 188 -----PFSMSGLLWNMMISMSASWFFVVLSEAISVAHQNIRLPGIGSYIALAIQQRDLHA 242 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M + ++ L+ PL + + Sbjct: 243 VGYAILTMVIVIFLYDQILFRPLIAWSEK 271 >gi|326314965|ref|YP_004232637.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371801|gb|ADX44070.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] Length = 578 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 268/562 (47%), Positives = 371/562 (66%), Gaps = 11/562 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D LV+ + +L +G + P ++ D++P++LD LP Y RTTLRM A+ Sbjct: 19 PNRWDWALLPLVLAGVVLLAYGAAQMARPFEMGDVIPLSLDPWQLPYYLLRTTLRMFIAL 78 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+F V+A LAAK R VLVP+LDI+QSIPILGFL+ TV F+ L+PG ++G E Sbjct: 79 GASLIFACVFAVLAAKYRLAERVLVPLLDILQSIPILGFLSITVTGFIALFPGSLLGVEC 138 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQSL +P +L+E +R F+LSGWQ+FW L +PF+MPGL+WNM Sbjct: 139 AAIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWRLELPFAMPGLLWNM 198 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPG+GSYIA+AI+ +DL AI +A+ ML I LYD Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIAMAIEARDLPAIGWAIACMLVAILLYD 258 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E + SW+L R+ + + + W ++L Sbjct: 259 QLLFRPLVAWADKFRFEEGSSDAAPRSWLLDWLRRARATQTV--AGW--------CQRQL 308 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL + + ++ + ++ + GV IA + + ++ + +V Sbjct: 309 GRTLTLFKRSHDGTSIRARPPAPSARAERVWDAVLAAGVLFAIA-RLVQFVHTEVGWHEV 367 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++V LG T+ RV+VLI +A+++W+P+G+WIG P + ++Q AQ LAAFPAN+FFP+ Sbjct: 368 VHVFTLGGYTLVRVMVLIALAAVVWVPIGVWIGMNPRWAGRLQAVAQFLAAFPANLFFPV 427 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V V ++ LNP++WLS LMI GTQWYILFNVIAGAS+ PN+ + A + ++GW W+ Sbjct: 428 AVMLVVHWKLNPDVWLSPLMILGTQWYILFNVIAGASSIPNELRLAAQNLGLSGWLKWKR 487 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +LP +FP +VTGAITA GG+WNASIV+E +WG L+ GLG+YIA+ T G FP + Sbjct: 488 YLLPAVFPSFVTGAITASGGSWNASIVAEYVTWGDTTLQARGLGSYIAQMTATGDFPRIA 547 Query: 557 LGVLIMCCFVLALNRFLWHPLY 578 LG+ M FV+ LN FLW LY Sbjct: 548 LGIGAMVVFVMGLNHFLWRRLY 569 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 3/133 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 ++ IF +Q W + F++ P + +E A F ++GW R+WR + LP P + Sbjct: 140 AIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWR-LELPFAMPGLLWNM 198 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + + G W + SE S H ++ G+G+YIA + E P + + M +L + Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIAMAIEARDLPAIGWAIACMLVAILLYD 258 Query: 571 RFLWHPLYLYGTR 583 + L+ PL + + Sbjct: 259 QLLFRPLVAWADK 271 >gi|17548088|ref|NP_521490.1| transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17430395|emb|CAD16868.1| putative transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 586 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 276/579 (47%), Positives = 377/579 (65%), Gaps = 26/579 (4%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLF+F +A +A+++R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ S L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVK----------SLLERTAALA 315 Query: 317 CRTL--GVIRFHFPE------NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 RTL G R P+ +F++L RV+ ++ + W + ++ Sbjct: 316 ERTLAWGAERTR-PKASSGGNSFVRLPWAGRVADLIILLAALAAV-------WHILQFVR 367 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + +V V+WLG +TM RV+VLI +A++IW+P+GI IG P+++ QP AQ LAAF Sbjct: 368 SEVGWGEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAF 427 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PAN+ FPLVV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + + A +F + Sbjct: 428 PANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNFGL 487 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 GW W+ ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T Sbjct: 488 RGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTA 547 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 KG FP + LG+ +M FV+ NR LW+ LY RL Sbjct: 548 KGDFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 586 >gi|162147550|ref|YP_001602011.1| glycine betaine transport system permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545655|ref|YP_002277884.1| binding-protein-dependent transport systems inner membrane component [Gluconacetobacter diazotrophicus PAl 5] gi|161786127|emb|CAP55709.1| putative glycine betaine transport system permease protein [Gluconacetobacter diazotrophicus PAl 5] gi|209533332|gb|ACI53269.1| binding-protein-dependent transport systems inner membrane component [Gluconacetobacter diazotrophicus PAl 5] Length = 575 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 286/586 (48%), Positives = 384/586 (65%), Gaps = 22/586 (3%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 LP SR PN+FDL A + ++G+ +L + P + I LD LP YA Sbjct: 6 LPAPSSRPARPNVFDLAALLCIMGLAVVLGTAGRHMLAPISAPNAATIHLDPAWLPGYAV 65 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RTTLRM +A+ SL FTF YA AAKS R G+VLVP+LD++QS+PILGFLTFTVV+FM L Sbjct: 66 RTTLRMFAALGASLFFTFTYAVWAAKSPRAGLVLVPVLDVLQSVPILGFLTFTVVFFMGL 125 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 +PG+++GAELAAIF IFTSQ WNM FSMYQSL +P DL+EV+R F L+GWQKFW L VP Sbjct: 126 FPGRILGAELAAIFTIFTSQAWNMAFSMYQSLRAVPPDLDEVARCFGLTGWQKFWRLEVP 185 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 F++PGLVWN M+SMSGGWF VV SE I VG+T + LPGIGSY+ AI ++DL A+LYA++ Sbjct: 186 FAVPGLVWNAMISMSGGWFMVVYSETITVGNTNVLLPGIGSYVGTAIAQRDLWAVLYAIV 245 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 M+ VI YDQL+FRP++ WS +F G +D W+L L R+T LR I Sbjct: 246 AMMVVILAYDQLVFRPLVAWSGRFAATGIEGASASDPWLLVLLRRTALLRRI-------- 297 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML-----DIFWFCVVCGVAIGIAW 361 ++ + +G ++ + S+ R + ++ D+ W + ++ G AW Sbjct: 298 ---TDAIGDGLTAIGGLKLG------RRPSDARRTPLVPDRIRDVVWAVGLAMLSGGAAW 348 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 Q Y + + L+V+ LG +T+ RVV ++++AS+IW+P G+W+G P + + Q Sbjct: 349 QVWLYARATISMAEFLHVVSLGGLTLARVVAMVLLASLIWVPAGVWLGLDPVRARRAQFI 408 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 AQ +AAFPAN+FFP+ V + ++HL+ ++WL+ LMI GTQWYILFNV+AGA+++P D E Sbjct: 409 AQFMAAFPANLFFPIFVLFIVHFHLSSDIWLTPLMILGTQWYILFNVVAGAASYPADLLE 468 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 VA S + G WW +ILPGI P+Y+TGAITA GGAWNA+I +EVASWG HL GLGA Sbjct: 469 VARSLQVGGRLWWLRVILPGIVPFYITGAITASGGAWNAAIAAEVASWGDDHLSAHGLGA 528 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 YIA +T G V LG+ +M FVL NR +W PL Y R L Sbjct: 529 YIAHATVAGDTAHVGLGMTVMAAFVLLFNRAVWRPLAEYARRHFTL 574 >gi|39998041|ref|NP_953992.1| ABC transporter permease [Geobacter sulfurreducens PCA] gi|39984986|gb|AAR36342.1| ABC transporter, permease protein [Geobacter sulfurreducens PCA] Length = 538 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 273/550 (49%), Positives = 356/550 (64%), Gaps = 14/550 (2%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 + T VP IV ++LD LP YA RT +RM +A+ +SL FT Y TLAAKSRRL Sbjct: 1 MAATFVPGKIVP--SLSLDPRHLPYYALRTVIRMGAALCLSLAFTLTYGTLAAKSRRLSP 58 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +LVP LDI+QS+PILGFL+ TV F+ L+PG ++G E A+IFAIFTSQ WNM FS YQSL Sbjct: 59 ILVPTLDILQSVPILGFLSVTVTGFIALFPGSLMGVEAASIFAIFTSQAWNMAFSFYQSL 118 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 IPRDL E + F LSGWQ+FW + PF++P LVWN+MMS+SGGWFFVVASE I VG T Sbjct: 119 KTIPRDLGEAATLFGLSGWQRFWRVEAPFAVPPLVWNIMMSVSGGWFFVVASEAITVGKT 178 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278 + LPGIGSY+ALAI QD+ AI +A+ TML VI LYDQL FRP++ W+ KFR+E + Sbjct: 179 AVTLPGIGSYVALAIHRQDMGAIAWALATMLAVILLYDQLFFRPLVAWAEKFRVELSQAR 238 Query: 279 YPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 +SW L LF +T FL R + + ++ G R Sbjct: 239 IAPESWCLTLFARTRFLARALSLAGALPELLTERLPRRRRPRTGEHRHR----------G 288 Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 + + ++D W A+ W+ + V+ + ++L V LG TM RV VL+I+A Sbjct: 289 RPAARIMDRIWNAAFAVAALWALWK-LARFVSVIPFGEILSVFGLGLATMARVAVLLIMA 347 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+ W+P+G+ IG P ++++QP AQ LAAFPAN+ FP V + + LNP +W + LMI Sbjct: 348 SLFWVPIGVTIGLNPRWTTRVQPVAQFLAAFPANLLFPAAVVLIVRFRLNPEIWTAPLMI 407 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA PND +E A++ ++GW WR ++LPGIFP +TG +TA GG Sbjct: 408 LGTQWYILFNVIAGASAIPNDLREAAANLGLSGWELWRRLLLPGIFPSLITGLVTASGGT 467 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 WNASIV+EV SWG L TGLG+ IA TE+G +P +VLG+ +M +V+ LNRF W L Sbjct: 468 WNASIVAEVVSWGPTTLTATGLGSAIARWTEQGDYPHIVLGIAVMSMYVVCLNRFFWRRL 527 Query: 578 YLYGTRCLRL 587 YL RL Sbjct: 528 YLLAQTRYRL 537 >gi|189348224|ref|YP_001941420.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|189338362|dbj|BAG47430.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 577 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/576 (47%), Positives = 374/576 (64%), Gaps = 22/576 (3%) Query: 17 PNIFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 P DL A ++V+G + LL GI ++ P + I+L +LP Y RT RM + Sbjct: 18 PGWRDLAAMLIVVGFL--LLAGISARQMAGPLAVAHPPAISLSPAALPGYTLRTVARMFA 75 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++ S++FTFVYAT AA+SRR VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GA Sbjct: 76 ALLASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGA 135 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIFTSQ WNMTFS YQ+L +P DL+E SRSFRLS WQ+FW L VPF+MPGLVW Sbjct: 136 ECAAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVPFAMPGLVW 195 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 N MMSMSGGWFFVVASE I VG+ + LPG+G+Y+A AI +DL A+ +A++ M I L Sbjct: 196 NAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVL 255 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQLLFRP++ WS +FR + SW+L LF ++ R++G +S Sbjct: 256 YDQLLFRPLVAWSERFRYGDAAPTVASRSWMLDLFHRS---RWMGRAS-----------G 301 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHF 371 + L P F+ ++ V D+ WF +CG A++ Sbjct: 302 PVRALLRRAARARPRGFMSAWRDRIVLPPRTGDVLWFA-LCGAGCAYAAYELFRLGRATL 360 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T+ D+ V G +T RV VL+ +AS+IW+P+GI IG RP ++++IQP Q LAAFP N Sbjct: 361 TWTDLRVVASEGGLTFVRVTVLVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPTN 420 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP+ V + L P++WL LMI G QWY+LFNVIAGASAFP D +E A+ F + Sbjct: 421 LLFPVAVFAIVRLRLEPDIWLCPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPA 480 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR+++LPG+ PY+VTGAI A GGAWNASIV+E SWG L GLGAYIA T+ G Sbjct: 481 TWWRHVMLPGVLPYFVTGAIAASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGD 540 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P + LGV +M V+A NR +W P+Y + R RL Sbjct: 541 YPRIALGVAVMSLLVIATNRLVWRPMYAFAERRTRL 576 >gi|120608820|ref|YP_968498.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] gi|120587284|gb|ABM30724.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] Length = 578 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 267/562 (47%), Positives = 369/562 (65%), Gaps = 11/562 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D LV+ + +L +G + P ++ D++P++LD LP Y RTTLRM A+ Sbjct: 19 PNRWDWALLPLVLAGVVLLAYGAAQMARPFEMGDVIPLSLDPWQLPYYLLRTTLRMFIAL 78 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+F V+A LAAK R VLVP+LDI+QSIPILGFL+ TV F+ L+PG ++G E Sbjct: 79 GASLVFACVFAVLAAKYRLAERVLVPLLDILQSIPILGFLSITVTGFIALFPGSLLGVEC 138 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQSL +P +L+E +R F+LSGWQ+FW L +PF+MPGL+WNM Sbjct: 139 AAIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWRLELPFAMPGLLWNM 198 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPG+GSYIALAI+ +DL I +A+ ML I LYD Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIALAIEARDLPTIGWAIACMLVAILLYD 258 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E + SW+L R+ + + + W ++L Sbjct: 259 QLLFRPLVAWADKFRFEEGSADAAPRSWLLDWLRRARATQTV--AGW--------CQRQL 308 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL + R ++ + ++ + GV IA + + ++ + +V Sbjct: 309 GRTLTLFRRSHDGTSIRARPPAPSARAERVWDAVLAAGVLFAIA-RLVQFVHTEVGWHEV 367 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++V LG T+ RV+VLI +A+++W+P+G+WIG P + ++Q AQ LAAFPAN+FFP+ Sbjct: 368 VHVFTLGGYTLARVMVLIALAAVVWVPIGVWIGMNPRWAGRLQAVAQFLAAFPANLFFPV 427 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V ++ LNP++WLS LMI GTQWYILFNVIAGAS+ PN+ + A + ++GW W+ Sbjct: 428 AVMLAVHWKLNPDVWLSPLMILGTQWYILFNVIAGASSIPNELRLAAQNLGLSGWLQWKR 487 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +LP +FP +VTGAITA GG+WNASIV+E +WG L+ GLG+YIA+ T G FP + Sbjct: 488 YLLPAVFPSFVTGAITASGGSWNASIVAEYVTWGDTTLQARGLGSYIAQMTAAGDFPRIA 547 Query: 557 LGVLIMCCFVLALNRFLWHPLY 578 LG+ M FV+ LN F+W LY Sbjct: 548 LGIGAMVVFVMGLNHFVWRRLY 569 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 3/133 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 ++ IF +Q W + F++ P + +E A F ++GW R+WR + LP P + Sbjct: 140 AIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWR-LELPFAMPGLLWNM 198 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + + G W + SE S H ++ G+G+YIA + E P + + M +L + Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIALAIEARDLPTIGWAIACMLVAILLYD 258 Query: 571 RFLWHPLYLYGTR 583 + L+ PL + + Sbjct: 259 QLLFRPLVAWADK 271 >gi|161522946|ref|YP_001585875.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|160346499|gb|ABX19583.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] Length = 600 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/576 (47%), Positives = 374/576 (64%), Gaps = 22/576 (3%) Query: 17 PNIFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 P DL A ++V+G + LL GI ++ P + I+L +LP Y RT RM + Sbjct: 41 PGWRDLAAMLIVVGFL--LLAGISARQMAGPLAVAHPPAISLSPAALPGYTLRTVARMFA 98 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++ S++FTFVYAT AA+SRR VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GA Sbjct: 99 ALLASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGA 158 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIFTSQ WNMTFS YQ+L +P DL+E SRSFRLS WQ+FW L VPF+MPGLVW Sbjct: 159 ECAAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVPFAMPGLVW 218 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 N MMSMSGGWFFVVASE I VG+ + LPG+G+Y+A AI +DL A+ +A++ M I L Sbjct: 219 NAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVL 278 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQLLFRP++ WS +FR + SW+L LF ++ R++G +S Sbjct: 279 YDQLLFRPLVAWSERFRYGDAAPTVASRSWMLDLFHRS---RWMGRAS-----------G 324 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHF 371 + L P F+ ++ V D+ WF +CG A++ Sbjct: 325 PVRALLRRAARARPRGFMSAWRDRIVLPPRTGDVLWFA-LCGAGCAYAAYELFRLGRATL 383 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T+ D+ V G +T RV VL+ +AS+IW+P+GI IG RP ++++IQP Q LAAFP N Sbjct: 384 TWTDLRVVASEGGLTFVRVTVLVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPTN 443 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP+ V + L P++WL LMI G QWY+LFNVIAGASAFP D +E A+ F + Sbjct: 444 LLFPVAVFAIVRLRLEPDIWLCPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPA 503 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR+++LPG+ PY+VTGAI A GGAWNASIV+E SWG L GLGAYIA T+ G Sbjct: 504 TWWRHVMLPGVLPYFVTGAIAASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGD 563 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P + LGV +M V+A NR +W P+Y + R RL Sbjct: 564 YPRIALGVAVMSLLVIATNRLVWRPMYAFAERRTRL 599 >gi|289166596|ref|YP_003456734.1| ABC transporter, permease protein [Legionella longbeachae NSW150] gi|288859769|emb|CBJ13750.1| putative ABC transporter, permease protein [Legionella longbeachae NSW150] Length = 579 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 265/546 (48%), Positives = 354/546 (64%), Gaps = 26/546 (4%) Query: 41 ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100 + P + + +PI+LD +LP YA RT LRM A+ S++FTF AAK+RR ++ Sbjct: 42 QMATPYQLGEQIPISLDPSNLPFYALRTVLRMFIALFFSIIFTFTVGLWAAKNRRAEQII 101 Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 +P +DI+QSIP+L FL+ TV F++L+P ++G E A+IFAIF +QVWNMTF YQS+ Sbjct: 102 IPAIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKT 161 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 +P DL+EV+ FRLS WQ+FW L VPFSM L+WNMM+SMS WFFVV SE I V I Sbjct: 162 LPHDLKEVASMFRLSAWQRFWKLEVPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNI 221 Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280 LPG+GSYIALAI+++DL A+ YA+LTM+ VIFLYDQ+ FRP+I WS KF+ E + Sbjct: 222 RLPGVGSYIALAIQQRDLHAVGYAILTMVIVIFLYDQIFFRPLIAWSEKFKAETSHDEAE 281 Query: 281 ADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHF-PENFLQLCSNQR 339 SW++ R + + K+ +GV HF +++L ++ Sbjct: 282 YQSWLVDWMRGSRLM------------------KQFAEIIGVFTDHFVNARWMRLNESKA 323 Query: 340 VSYM-------LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 V + LD FW V AW + +I+ D+++V LG T RV+ Sbjct: 324 VKEIDLKKQRRLDRFWGAFVFLCVCSGAWFLLRFILAELKISDIVHVFLLGAATGTRVIC 383 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 LII++S+IWIPVG+WIG RP I+ KIQP Q +AAFPAN+F+PL V + +HLN +W+ Sbjct: 384 LIILSSLIWIPVGVWIGMRPRIAQKIQPVIQFVAAFPANLFYPLFVIAIVKFHLNVEIWV 443 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 + LMI GTQWYILFNVIAGASA P + A +F + GW WW+ + +PGIFP+Y+TGAIT Sbjct: 444 TPLMILGTQWYILFNVIAGASAIPRELYLAADNFGLKGWLWWKRLAVPGIFPFYITGAIT 503 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIV+E SWG+ LR TGLG YI ST G FP++ LG +MC +VLA N Sbjct: 504 AAGGAWNASIVAEFVSWGNTTLRATGLGEYIQASTATGDFPKIALGTAMMCLYVLAFNHL 563 Query: 573 LWHPLY 578 +W PLY Sbjct: 564 IWRPLY 569 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 10/205 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R+ + + + I VG+W I P +L + P F L ++ + H Sbjct: 69 TVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIIIPAIDILQSIPVLSF--LSITVTGFIH 126 Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498 L PN L S+ IF Q W + F P+D KEVAS F ++ W R+W+ + Sbjct: 127 LFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTLPHDLKEVASMFRLSAWQRFWK-LE 185 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P + + + +W ++SE S H ++R G+G+YIA + ++ V Sbjct: 186 VPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIQQRDLHAVGYA 245 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583 +L M + ++ + PL + + Sbjct: 246 ILTMVIVIFLYDQIFFRPLIAWSEK 270 >gi|83310424|ref|YP_420688.1| ABC-type anion transport system [Magnetospirillum magneticum AMB-1] gi|82945265|dbj|BAE50129.1| ABC-type anion transport system [Magnetospirillum magneticum AMB-1] Length = 579 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/580 (47%), Positives = 376/580 (64%), Gaps = 14/580 (2%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 ++ + PN +DL ++ ++ +L +G + T P D+ + + ++LD LP Y R+ L Sbjct: 10 VAPELKPNFWDLAIIPIIFALLALLAYGGAQMTTPYDVGEKLALSLDPAGLPYYLLRSAL 69 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM +A++ SL+FT +YA+LAAK L VL+PILDI+QSIPILGFL+ TV F+ L+PG Sbjct: 70 RMAAALLASLIFTLIYASLAAKVPALEKVLIPILDILQSIPILGFLSITVTGFIALFPGN 129 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIFAIFTSQ WNMTFS+Y SL +P DL E S F LS WQ+FW L +P++MP Sbjct: 130 LLGVECAAIFAIFTSQAWNMTFSLYSSLKTVPNDLIEASEMFHLSPWQRFWRLELPWAMP 189 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 GLVWNMMMS+SGGWFFVVASE I V I LPG+GSYIALAI E++L AI +AML +L Sbjct: 190 GLVWNMMMSVSGGWFFVVASEAISVSGQSIALPGVGSYIALAIAEENLAAIGWAMLAVLA 249 Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY---SSWNFFS 307 I +YDQL+FRP++ W++KF+++ G +SW+L L ++ R++ ++W+ F+ Sbjct: 250 GIMIYDQLMFRPLVAWADKFKVDSAPGEQQPESWLLTLMQRGRLFRYLARLPSAAWDRFT 309 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 L R + H P + L S + + + V +G+ +I Sbjct: 310 FLLRQ-----REETTLFHHAPIRMVTLPSWAERVWDGLLILAALGALVEVGL------FI 358 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +V V+ G T RVVVLI +AS+IW+PVG+WIG RP ++ +Q AQ LAA Sbjct: 359 HGAIGLWEVWQVLLYGLTTALRVVVLISLASLIWVPVGVWIGQRPLVAQNVQWVAQFLAA 418 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FP+ V + ++ N ++W S LMI GTQWYILFNVIAGASA P D K+ A + Sbjct: 419 FPANLMFPVAVVLIVHFDANVDVWTSPLMILGTQWYILFNVIAGASAIPQDMKDAAGNLG 478 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 ++GW W+ ILP IFP YVTGA+TA GG+WNASIVSE+ SWG L GLG+YIA +T Sbjct: 479 LSGWLRWKKFILPAIFPSYVTGAVTASGGSWNASIVSELVSWGDTKLEAVGLGSYIARAT 538 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G FP + LG+ +MC FV+ NRFLW LY+ LRL Sbjct: 539 ADGDFPRIALGIAVMCLFVMGFNRFLWRRLYMLAADRLRL 578 >gi|270158574|ref|ZP_06187231.1| ABC transporter permease domain protein [Legionella longbeachae D-4968] gi|269990599|gb|EEZ96853.1| ABC transporter permease domain protein [Legionella longbeachae D-4968] Length = 537 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 265/544 (48%), Positives = 353/544 (64%), Gaps = 26/544 (4%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P + + +PI+LD +LP YA RT LRM A+ S++FTF AAK+RR +++P Sbjct: 2 ATPYQLGEQIPISLDPSNLPFYALRTVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIIIP 61 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +DI+QSIP+L FL+ TV F++L+P ++G E A+IFAIF +QVWNMTF YQS+ +P Sbjct: 62 AIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTLP 121 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 DL+EV+ FRLS WQ+FW L VPFSM L+WNMM+SMS WFFVV SE I V I L Sbjct: 122 HDLKEVASMFRLSAWQRFWKLEVPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIRL 181 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD 282 PG+GSYIALAI+++DL A+ YA+LTM+ VIFLYDQ+ FRP+I WS KF+ E + Sbjct: 182 PGVGSYIALAIQQRDLHAVGYAILTMVIVIFLYDQIFFRPLIAWSEKFKAETSHDEAEYQ 241 Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHF-PENFLQLCSNQRVS 341 SW++ R + + K+ +GV HF +++L ++ V Sbjct: 242 SWLVDWMRGSRLM------------------KQFAEIIGVFTDHFVNARWMRLNESKAVK 283 Query: 342 YM-------LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394 + LD FW V AW + +I+ D+++V LG T RV+ LI Sbjct: 284 EIDLKKQRRLDRFWGAFVFLCVCSGAWFLLRFILAELKISDIVHVFLLGAATGTRVICLI 343 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 I++S+IWIPVG+WIG RP I+ KIQP Q +AAFPAN+F+PL V + +HLN +W++ Sbjct: 344 ILSSLIWIPVGVWIGMRPRIAQKIQPVIQFVAAFPANLFYPLFVIAIVKFHLNVEIWVTP 403 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 LMI GTQWYILFNVIAGASA P + A +F + GW WW+ + +PGIFP+Y+TGAITA Sbjct: 404 LMILGTQWYILFNVIAGASAIPRELYLAADNFGLKGWLWWKRLAVPGIFPFYITGAITAA 463 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574 GGAWNASIV+E SWG+ LR TGLG YI ST G FP++ LG +MC +VLA N +W Sbjct: 464 GGAWNASIVAEFVSWGNTTLRATGLGEYIQASTATGDFPKIALGTAMMCLYVLAFNHLIW 523 Query: 575 HPLY 578 PLY Sbjct: 524 RPLY 527 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 10/205 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R+ + + + I VG+W I P +L + P F L ++ + H Sbjct: 27 TVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIIIPAIDILQSIPVLSF--LSITVTGFIH 84 Query: 446 LNPNLWL-----SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498 L PN L S+ IF Q W + F P+D KEVAS F ++ W R+W+ + Sbjct: 85 LFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTLPHDLKEVASMFRLSAWQRFWK-LE 143 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P + + + +W ++SE S H ++R G+G+YIA + ++ V Sbjct: 144 VPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIQQRDLHAVGYA 203 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583 +L M + ++ + PL + + Sbjct: 204 ILTMVIVIFLYDQIFFRPLIAWSEK 228 >gi|73542714|ref|YP_297234.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gi|72120127|gb|AAZ62390.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 584 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 272/572 (47%), Positives = 371/572 (64%), Gaps = 14/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FD +++ II ++ Q+ VP + + + LD+ LP Y RT++RML+A+ Sbjct: 26 PNRFDFALLPIILAIIVMVAFAAQQMNVPFVPGEPMTVHLDIAYLPYYLMRTSIRMLAAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+F+ +A LA+K+R VLVP LDI+QSIP+LGFL+ TV F+ L+PG +IG E Sbjct: 86 AASLVFSLAFAALASKNRTAEKVLVPALDILQSIPVLGFLSITVTGFIALFPGNLIGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DL E + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYIALAI++Q+L AI +A+L ML I +YD Sbjct: 206 MMSMSGGWFFVVASEAISVSGQDIRLPGIGSYIALAIQQQNLAAIGWAILAMLVGILVYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+++FR E + +SW+L L R++ ++R + + Sbjct: 266 QLLFRPLVAWADRFRFETLSQDNEPESWLLDLLRRSEWVRALLART----------AALA 315 Query: 317 CRTLG-VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 RTL R P +RV + + V+ VA+ + + ++ + + + Sbjct: 316 ERTLAWGARRQAPAT--AEPDPRRVQWR-ERAGNAVILLVALAALSRVMYFVHSEVGWLE 372 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V +V+WLG +TM RV+VLI +A++IW+P+GI IG P ++ QP AQ LAAFPAN+ FP Sbjct: 373 VGHVLWLGTLTMVRVIVLIALAAVIWVPIGIRIGLNPSVARIAQPVAQFLAAFPANLMFP 432 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + + LNP +WLS L+IFGTQWYILFNV+AGAS P + K A +F + GW W+ Sbjct: 433 LVVMLIVRFGLNPEIWLSPLLIFGTQWYILFNVVAGASGIPTELKLAARNFGLRGWLLWK 492 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++P +FP +TG +TA GG+WNASIV+E +WG L TGLG+YIAE+T +G FP + Sbjct: 493 RFLIPAVFPSLLTGLVTAAGGSWNASIVAEYVTWGDRTLVATGLGSYIAETTARGDFPRI 552 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 553 ALGIGVMALFVVGFNRLLWNRLYQLAQERTRL 584 >gi|83749465|ref|ZP_00946456.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|207722076|ref|YP_002252514.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|207744869|ref|YP_002261261.1| transmembrane protein [Ralstonia solanacearum IPO1609] gi|83723862|gb|EAP71049.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|206587250|emb|CAQ17834.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|206596279|emb|CAQ63206.1| transmembrane protein [Ralstonia solanacearum IPO1609] Length = 586 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 277/576 (48%), Positives = 372/576 (64%), Gaps = 20/576 (3%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + + LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYIPGEALDVRLDVVQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 AGSLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA-----WQSIGYIVNHF 371 RTL E SN S++ W V V I +A W + ++ + Sbjct: 316 ERTLA----WGAERTRPKASNSN-SFLPRFPWSGRVADVVIMLAALAALWHILQFVRSEV 370 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + +V V+WLG +TM RV++LI +A++IW+P+GI IG P+++ QP AQ LAAFPAN Sbjct: 371 GWAEVGRVVWLGVLTMTRVLLLIALAAVIWVPIGIRIGLNPNVARIAQPVAQFLAAFPAN 430 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FPLVV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS P + + A +F + GW Sbjct: 431 LMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASGIPMELRLAARNFGLRGW 490 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 W+ ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG Sbjct: 491 LMWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTSKGD 550 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP + LG+ +M FV+ NR LW+ LYL RL Sbjct: 551 FPRIALGIAVMSLFVVGFNRLLWNRLYLLAQERTRL 586 >gi|300702458|ref|YP_003744058.1| binding-protein-dependent transporter [Ralstonia solanacearum CFBP2957] gi|299070119|emb|CBJ41408.1| Putative binding-protein-dependent transporter [Ralstonia solanacearum CFBP2957] Length = 586 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 274/576 (47%), Positives = 373/576 (64%), Gaps = 20/576 (3%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + + LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEALDVRLDVVQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 AGSLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA-----WQSIGYIVNHF 371 RTL + + ++ S++ W V V I +A W + ++ + Sbjct: 316 ERTLA-----WGAERTRPKASGSNSFLPRFPWSGRVADVIIMLAALAALWHILQFVRSEV 370 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + +V V+WLG +TM RV++LI +A++IW+P+GI IG P+++ QP AQ LAAFPAN Sbjct: 371 GWAEVGRVVWLGVLTMTRVLLLIALAAVIWVPIGIRIGLNPNVARIAQPVAQFLAAFPAN 430 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FPLVV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS P + + A +F + GW Sbjct: 431 LMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASGIPMELRLAARNFGLRGW 490 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 W+ ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG Sbjct: 491 LMWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTSKGD 550 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP + LG+ +M FV+ NR LW+ LYL RL Sbjct: 551 FPRIALGIAVMSLFVVGFNRLLWNRLYLLAQERTRL 586 >gi|113869274|ref|YP_727763.1| ABC transporter permease [Ralstonia eutropha H16] gi|113528050|emb|CAJ94395.1| ABC-type transporter, duplicated permease domains: TauT family [Ralstonia eutropha H16] Length = 583 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/585 (48%), Positives = 371/585 (63%), Gaps = 20/585 (3%) Query: 8 PPFISR--RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 P F S+ R PN FDL +++ +I ++ Q+ P + + LDV LP Y Sbjct: 14 PGFDSQLLRAPPNRFDLALLPIILAVIVMIAFTAQQMNAPFQPDQQLAVHLDVAYLPYYL 73 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 RT++RML+A+ SLLF+ +A LA+KSR VLVP LDI+QSIP+LGFL+ TV F+ Sbjct: 74 MRTSIRMLAALAASLLFSLAFAALASKSRTAEKVLVPALDILQSIPVLGFLSITVTGFIA 133 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L+PG + G E AAIFAIFTSQ WNM FS+YQS IP DL E + FRLS WQ+FW L V Sbjct: 134 LFPGNIAGVECAAIFAIFTSQAWNMAFSLYQSFRTIPGDLMEAAAMFRLSPWQRFWRLEV 193 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 PF+MPGL+WNMMMSMSGGWFFVVASE I V I LPGIGSYIALAI++QDL AI +A+ Sbjct: 194 PFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQDLAAIGWAI 253 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 L ML I LYDQLLFRP++ W+++FR E SW+L L R++ ++ + Sbjct: 254 LAMLAGILLYDQLLFRPLVAWADRFRFETQAQDKLPQSWLLDLLRRSAWVGAV------- 306 Query: 306 FSPLSNNVKKLCRTL--GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363 L+ RTL G R P N R + V+ VA+ A Sbjct: 307 ---LAQTAALAGRTLAWGARRGQAPAQ----PDNPRRALWFGRVRDAVIVLVALA-ALLR 358 Query: 364 IGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 +GY V+ + +V +V+WLG ITM RVVVLI +A+++W+P+GI IG P ++ QP A Sbjct: 359 VGYFVHSEVGWAEVGHVLWLGTITMVRVVVLIALAALVWVPIGIRIGLSPELARIAQPIA 418 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q LAAFPAN+ FPL V + + LNP +WLS L+IFGTQWYILFNV+AGAS P + K Sbjct: 419 QFLAAFPANLMFPLAVMLIVRFGLNPEIWLSPLLIFGTQWYILFNVVAGASGIPTELKLA 478 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 +F + GW W+ ++P +FP +TG +TA GG+WNASIVSE +WG + TGLG+Y Sbjct: 479 TRNFGLRGWLLWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTIVATGLGSY 538 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 IAE+T +G FP + LG+++M FV+ NR LW+ LY RL Sbjct: 539 IAETTARGDFPRIALGIVVMALFVVGFNRLLWNRLYQLAQERTRL 583 >gi|317407655|gb|EFV87594.1| ABC transport system permease [Achromobacter xylosoxidans C54] Length = 577 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 256/563 (45%), Positives = 364/563 (64%), Gaps = 13/563 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 N +D LV+G++ + +G + + P + + +PI+LD LP Y RT LRM +A+ Sbjct: 20 NRWDWALLPLVLGVLAAMAYGASQMSRPFAVGEELPISLDPIYLPYYLLRTILRMFTALA 79 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 SLLF+FV+A +AAK R ++P+LDI+QS+PILGF + F+ L+PG ++G E A Sbjct: 80 FSLLFSFVFAAIAAKFRTAEKAMIPMLDILQSVPILGFQAIAIAPFIALFPGNLLGVECA 139 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS+YQS+ +P +L E +R FRLSGWQ+FW L +P++ PGL+WNMM Sbjct: 140 AIFAIFTSQAWNMAFSLYQSMRTVPAELNEAARVFRLSGWQRFWRLELPYATPGLLWNMM 199 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MSMSGGWFF+VA+E I V I LPGIGSYIA+AI ++ AI +A+ M+ I LYDQ Sbjct: 200 MSMSGGWFFLVAAEAISVAGQDIKLPGIGSYIAVAIDAENGRAIAWAIGAMMAGILLYDQ 259 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L FRP++ W++KFR E + SW+L R++ +++ + W ++ Sbjct: 260 LFFRPLLAWADKFRFEESQADVAQQSWLLDWTRRSRWMQALSNMFW----------ARMR 309 Query: 318 RTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R LG F P + + + + W ++ A+ ++ + ++ + +V Sbjct: 310 RALGW--FSVPYDGTSIRARAKAPDPRWTRIWDSLLAAAALLATYKLVVFVHQEVGWGEV 367 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L+V+ LG IT+ RV+VLI +AS+IW+P+ +WIG RP S ++Q AQ LAAFP N+ FP Sbjct: 368 LHVVGLGGITLARVMVLIGLASLIWVPIAVWIGLRPRYSQRVQAVAQFLAAFPVNLLFPA 427 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV + + LNPN+WLS L+IFGTQWYILFNV+AGAS PN+ + A + + GW WR Sbjct: 428 VVFVMVAFKLNPNIWLSPLIIFGTQWYILFNVVAGASTIPNELRLAAGNLGLKGWLLWRR 487 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LP +FP ++TGAITA GG+WNASIV+E SWG+ L GLG+YI + TE+G F + Sbjct: 488 VYLPAVFPSFITGAITASGGSWNASIVAEYVSWGNTSLVADGLGSYIKQMTEQGDFHRIA 547 Query: 557 LGVLIMCCFVLALNRFLWHPLYL 579 LG+ +M FV+ LNRF W LYL Sbjct: 548 LGIGVMSIFVMLLNRFFWRKLYL 570 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 20/168 (11%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476 I PF +A FP N+ L V C + + IF +Q W + F++ P Sbjct: 122 IAPF---IALFPGNL---LGVECAAIFA-----------IFTSQAWNMAFSLYQSMRTVP 164 Query: 477 NDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E A F ++GW R+WR + LP P + + + G W + +E S ++ Sbjct: 165 AELNEAARVFRLSGWQRFWR-LELPYATPGLLWNMMMSMSGGWFFLVAAEAISVAGQDIK 223 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G+G+YIA + + + + + M +L ++ + PL + + Sbjct: 224 LPGIGSYIAVAIDAENGRAIAWAIGAMMAGILLYDQLFFRPLLAWADK 271 >gi|160872910|ref|ZP_02063042.1| ABC transporter, permease protein [Rickettsiella grylli] gi|159121709|gb|EDP47047.1| ABC transporter, permease protein [Rickettsiella grylli] Length = 577 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 263/586 (44%), Positives = 382/586 (65%), Gaps = 14/586 (2%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62 +YN S +I PN +D +A ++V+G++ + ++ T P + +TLD LP Sbjct: 4 IYNRFSFRSSFKILPNAWDFVALIMVLGMLAAFVWAGKQITSPYHVGQPFALTLDPLQLP 63 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 +YA T LR+ +AM SLLFTF TLAAK++R +++P +DI+QS+P++G L+ T+V Sbjct: 64 KYALFTVLRLFTAMAFSLLFTFTVGTLAAKNKRAARIIIPCIDILQSVPVIGLLSITIVG 123 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F+ L+ G +G E AAIFA+FT+QVWN+T S YQSL ++P +L+E + F LS WQ+FW Sbjct: 124 FITLFQGSRLGPEAAAIFAVFTAQVWNITLSFYQSLRSVPTELKEAADIFHLSSWQRFWR 183 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 L VPFSMPGL+WN+MMSMS W F++ASE I V + I LPGIGSY+ LAI + ++ Sbjct: 184 LDVPFSMPGLLWNIMMSMSASWIFLIASESISVNNQTIILPGIGSYLGLAINRASISGVI 243 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302 Y +LTM VI LYDQLLFRP++ WS KF E+ + Y + SW+ L ++T L+++G Sbjct: 244 YTILTMFVVILLYDQLLFRPLLNWSKKFTFEQVSQEYVSRSWLTSLLQQTYILKYLG--- 300 Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS-YMLDIFWFCVVCGVAIGIAW 361 FF L + ++ F + ++ + + S +D W+ + W Sbjct: 301 -RFFGKLGDT---------IVNISFFKTKKEVSAKKSGSNKFIDFIWYSMTFVFVSLSLW 350 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + +I+ + + ++++V +LGCIT R++ +I+IASIIWIP+G++IG I+ IQP Sbjct: 351 LLLQFILKNLSLHELIHVFFLGCITALRIISIILIASIIWIPIGVFIGLNRRIAEWIQPI 410 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 AQ AAFPANV FP+VV + YHLN +W + L++ GTQWYILFNVIAG +A P D KE Sbjct: 411 AQFFAAFPANVLFPIVVILILKYHLNFEIWSTPLLLLGTQWYILFNVIAGTAALPEDLKE 470 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 V+S+F + GW+WWR +ILPGIFP+++TG ITA GG WN +I++E+ +WG I L +TGLGA Sbjct: 471 VSSNFGVKGWQWWRRLILPGIFPHWITGTITAIGGGWNLTILTEIINWGSITLVSTGLGA 530 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 YIA+S + G FP + LG+ +M FVL +N +W PLY RL Sbjct: 531 YIAKSADAGDFPRIALGMAMMSLFVLVMNHLVWRPLYNLSQSRYRL 576 >gi|23013971|ref|ZP_00053815.1| COG4986: ABC-type anion transport system, duplicated permease component [Magnetospirillum magnetotacticum MS-1] Length = 582 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 279/581 (48%), Positives = 373/581 (64%), Gaps = 16/581 (2%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 ++ + PN +DL ++ ++ +L +G + T P D+ + + ++LD LP Y R+ L Sbjct: 13 VAPELKPNFWDLAIIPMIFALLALLAYGGAQMTTPYDVGEKLALSLDPAGLPYYLLRSAL 72 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM +A++ SL FT VYATLAAK L VL+P+LDI+QSIPILGFL+ TV F+ L+PG Sbjct: 73 RMAAALLASLAFTLVYATLAAKVPALEKVLIPVLDILQSIPILGFLSITVTGFIALFPGN 132 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIFAIFTSQ WNMTFS+Y SL DL E S F LS WQ+FW L +P++MP Sbjct: 133 LLGVECAAIFAIFTSQAWNMTFSLYSSLKTERYDLIEASEMFHLSPWQRFWRLELPWAMP 192 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 GLVWNMMMS+SGGWFFVVASE I V I LPG+GSYIALAI E++L AI +A+L +L Sbjct: 193 GLVWNMMMSVSGGWFFVVASEAISVSGQSIALPGVGSYIALAIAEENLAAIGWAVLAVLA 252 Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY---SSWNFFS 307 I +YDQL+FRP++ W++KF+++ G +SW+L L ++ R + + W+ F+ Sbjct: 253 GIMIYDQLMFRPLVAWADKFKVDSLPGEQQPESWLLTLMQRGRMFRTLARLPSAMWDRFT 312 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR-VSYMLDIFWFCVVCGVAIGIAWQSIGY 366 L L R FH + + + + R V D C G + +A + Sbjct: 313 FL------LRRKDRAQLFH--QAPIHMVTLPRWVERTWDGLLICGAVGALVEVAL----F 360 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I +V V+ G T FRVVVLI +AS+IW+PVG+WIG RP ++ +Q AQ LA Sbjct: 361 IHGSIGLWEVGQVLLYGFATAFRVVVLISLASLIWVPVGVWIGQRPLVAQNVQWVAQFLA 420 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN+ FP+ V + + N ++W S LMI GTQWYILFNVIAGASA P D K+ A + Sbjct: 421 AFPANLMFPVAVVLIVRFDANVDVWTSPLMILGTQWYILFNVIAGASAIPQDMKDAAGNL 480 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 ++GW W+ ILP IFP YVTGA+TA GG+WNASIVSE+ SWG L GLG+YIA + Sbjct: 481 GLSGWLRWKKFILPAIFPSYVTGAVTASGGSWNASIVSELVSWGDTKLEAVGLGSYIARA 540 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 T G FP + LG+ +MC FV+ NRFLW LY+ LRL Sbjct: 541 TADGDFPRIALGIAVMCLFVMGFNRFLWRRLYMLAADRLRL 581 >gi|241664824|ref|YP_002983184.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] gi|240866851|gb|ACS64512.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] Length = 594 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 272/572 (47%), Positives = 374/572 (65%), Gaps = 12/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 34 PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 94 GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A+L ML I LYD Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-FIGYSSWNFFSPLSNNVKK 315 QLLFRP+I W+++FR + + SW+L L R++ +++ + ++ LS ++ Sbjct: 274 QLLFRPLIAWADRFRFDTMSSEREPQSWLLDLLRRSEWVKALLERTAALAEHTLSWGAER 333 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 T P + + RV+ ++ I + VA + ++ + + + Sbjct: 334 TRPTAAGSNGFLP----RFPWSHRVADVVII--LAALMAVA-----HVLQFVRSEVGWAE 382 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V +V WLG +TM RV++LI +A+++W+P+GI IG P+++ QP AQ LAAFPAN+ FP Sbjct: 383 VGHVFWLGFLTMLRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFP 442 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L V ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K A +F + GW W+ Sbjct: 443 LAVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLWK 502 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 503 RFLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRI 562 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 563 ALGIAVMSLFVVGFNRLLWNRLYDIAQERTRL 594 >gi|187930633|ref|YP_001901120.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gi|187727523|gb|ACD28688.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] Length = 594 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 272/573 (47%), Positives = 370/573 (64%), Gaps = 14/573 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 34 PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 94 GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPIDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A+L ML I LYD Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 274 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 323 Query: 317 CRTL--GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 RTL G R P R + + ++ + +A + ++ + + Sbjct: 324 ERTLSWGAERTR-PTAAGGNGFLPRFPWSHRVADVIIILAALVAVA-HVLQFVRSEVGWA 381 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 +V +V WLG +TM RV++LI +A+++W+P+GI IG P+++ QP AQ LAAFPAN+ F Sbjct: 382 EVGHVFWLGFLTMVRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMF 441 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL V ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K A +F + GW W Sbjct: 442 PLAVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLW 501 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 + ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP Sbjct: 502 KRFLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPR 561 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + LG+ +M FV+ NR LW+ LY RL Sbjct: 562 IALGIAVMSLFVVGFNRLLWNRLYDIAQERTRL 594 >gi|309780369|ref|ZP_07675120.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308921072|gb|EFP66718.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 594 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 272/573 (47%), Positives = 371/573 (64%), Gaps = 14/573 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 34 PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 94 GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPIDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A+L ML I LYD Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 274 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 323 Query: 317 CRTL--GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 RTL G R P R + + ++ + +A + ++ + + Sbjct: 324 ERTLSWGAERTR-PTAAGGNGFLPRFPWSHRVADVIIILAALVAVA-HVLQFVRSEVGWA 381 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 +V +V WLG +TM RV++LI +A+++W+P+GI IG P+++ QP AQ LAAFPAN+ F Sbjct: 382 EVGHVFWLGFLTMVRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMF 441 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL V ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K A +F + GW W Sbjct: 442 PLAVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLW 501 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 + ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP Sbjct: 502 KRFLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPR 561 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + LG+++M FV+ NR LW+ LY RL Sbjct: 562 IALGIVVMSLFVVGFNRLLWNRLYDIAQERTRL 594 >gi|152980896|ref|YP_001353349.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] gi|151280973|gb|ABR89383.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] Length = 577 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 269/578 (46%), Positives = 376/578 (65%), Gaps = 20/578 (3%) Query: 10 FISRR-------IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62 F+ RR I PN +D LV+ ++ + G + T P + ++ PI+LD +LP Sbjct: 5 FVPRRTDRSLLAISPNRWDWALLPLVLAVLVAVGFGAMQMTRPFVVGEVTPISLDPANLP 64 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Y RT LRM A+ +LLF+FV+A +AAK R V++P LDI+QS+PILGF + Sbjct: 65 YYLLRTILRMFIALGCALLFSFVFAAIAAKYRAAEKVMIPTLDILQSVPILGFQAIAIAP 124 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F+ +PG ++G E AAIFAIF+SQ WNM FS+YQS+ +P +L E +R FRLSGWQ+FW Sbjct: 125 FIAFFPGSLLGVECAAIFAIFSSQAWNMAFSLYQSIRTVPSELNEAARVFRLSGWQRFWR 184 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 L +P++MPGL+WNMMMSMSGGWFF+VA+E I V + I LPGIG+YIA+AI+ +DL AIL Sbjct: 185 LELPYAMPGLLWNMMMSMSGGWFFLVAAEAISVANQDIKLPGIGAYIAVAIEAKDLHAIL 244 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302 +A+ ML I LYDQL FRP++ W++KFR E + G SW+L R++ ++R Sbjct: 245 WAIGAMLAGIVLYDQLFFRPLLAWADKFRFEESQGETEQRSWLLNWGRRSRWMRAGTDRM 304 Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362 W L TLG F + ++ RV + + + + VV +A G+A Sbjct: 305 WAM----------LRSTLGW--FSVSYDGTAPRASARVIHPMWMRVWNVVLLLAAGLAVY 352 Query: 363 SIG-YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 +G ++ + + +V +V+WLG IT+ RV++LI +AS++W+P+ +WIG RP S ++Q Sbjct: 353 RLGIFVHSEVGWAEVGHVLWLGVITLTRVLLLIALASLVWVPIAVWIGLRPKYSQRVQGL 412 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 AQ LAAFP N+ FPLVV + LNPN+WLS LM+FGTQWYILFNV+AGAS PN+ + Sbjct: 413 AQFLAAFPVNLMFPLVVYLLLTMQLNPNIWLSPLMVFGTQWYILFNVVAGASTIPNELRL 472 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 + + + GW W+ + LP +FP YVTGAITA GG+WNASIV+E +WG L GLG+ Sbjct: 473 ASDNLGLKGWLKWKRVYLPAVFPSYVTGAITASGGSWNASIVAEYVTWGKTTLIADGLGS 532 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579 YI + T+ G F + LG+ +MC FV+ LNRF W LYL Sbjct: 533 YIKQMTDAGDFHRIALGIGVMCIFVMLLNRFFWRKLYL 570 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 17/166 (10%) Query: 423 QLLAAFPANVFFP---LVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPND 478 Q +A P FFP L V C + + IF +Q W + F++ P++ Sbjct: 118 QAIAIAPFIAFFPGSLLGVECAAIFA-----------IFSSQAWNMAFSLYQSIRTVPSE 166 Query: 479 FKEVASSFHITGW-RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 E A F ++GW R+WR + LP P + + + G W + +E S + ++ Sbjct: 167 LNEAARVFRLSGWQRFWR-LELPYAMPGLLWNMMMSMSGGWFFLVAAEAISVANQDIKLP 225 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G+GAYIA + E ++ + M ++ ++ + PL + + Sbjct: 226 GIGAYIAVAIEAKDLHAILWAIGAMLAGIVLYDQLFFRPLLAWADK 271 >gi|94312116|ref|YP_585326.1| binding-protein-dependent transport systems inner membrane component [Cupriavidus metallidurans CH34] gi|93355968|gb|ABF10057.1| ABC-type transporter, permease component [Cupriavidus metallidurans CH34] Length = 581 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 269/572 (47%), Positives = 369/572 (64%), Gaps = 13/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FD +++ +I I+ ++ VP D + + LDV SLP Y RT++RML+A+ Sbjct: 22 PNRFDFALLPIILAVIVIVAFAAKQMVVPYQPGDALSVQLDVASLPYYLMRTSIRMLAAL 81 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLF+F +A +A+++R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 82 AASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 141 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DL E + FRLS WQ+FW L VP++MPGL+WNM Sbjct: 142 AAIFAIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPYAMPGLLWNM 201 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYIALAI++Q+L AI +A++ ML I +YD Sbjct: 202 MMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQNLPAIGWAIVAMLVGILIYD 261 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 Q LFRP++ W+++FR E SW+L L R++ ++ + L Sbjct: 262 QFLFRPLVAWADRFRFETLAQDTMPQSWLLDLLRRSAWVHAL----------LKWTASLG 311 Query: 317 CRTLGVIRFHFPENFLQL-CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 RTL H N + L + R S L+ V+ +A+ ++ + ++ + + + Sbjct: 312 GRTLAWSARH--RNMVVLPAAPARWSPWLERLRDTVIIVIALAALYRVVHFVHSEVGWGE 369 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 +V+WLG +TM RV+VLI +A++IW+P+GI IG P ++ QP AQ +AAFPAN+ FP Sbjct: 370 AAHVLWLGVLTMTRVIVLIALAALIWVPIGIRIGLNPSVARIAQPIAQFMAAFPANLMFP 429 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L V + + LNP +WLS LMIFGTQWYILFNV+AGAS P + + A +F + GW WR Sbjct: 430 LAVMAIVRFGLNPEIWLSPLMIFGTQWYILFNVVAGASGIPTELRLAARNFGLKGWLMWR 489 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++P +FP +TG +TA GG+WNASIVSE +WG L TGLG+YIAE T +G FP + Sbjct: 490 RFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTLVATGLGSYIAEMTARGDFPRI 549 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 550 ALGIGVMALFVVGFNRLLWNRLYDLAQLRTRL 581 >gi|194290861|ref|YP_002006768.1| binding-protein-dependent transporter inner membrane component [Cupriavidus taiwanensis LMG 19424] gi|193224696|emb|CAQ70707.1| putative Binding-protein-dependent transporter, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 584 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 279/584 (47%), Positives = 374/584 (64%), Gaps = 17/584 (2%) Query: 8 PPFISR--RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 P F S+ R PN FDL +++ +I ++ Q+ VP + + LDV LP Y Sbjct: 14 PGFDSQLLRAPPNRFDLALLPIILAVIVMIAFAAQQMNVPFRPDQPLAVHLDVAYLPYYL 73 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 RT++RML+A+ SLLF+ +A LA+KSR VLVP LDI+QSIP+LGFL+ TV F+ Sbjct: 74 MRTSVRMLAALAASLLFSLAFAALASKSRSAEKVLVPALDILQSIPVLGFLSITVTGFIA 133 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L+PG + G E AAIFAIFTSQ WNM FS+YQS IP DL E + FRLS WQ+FW L V Sbjct: 134 LFPGNLAGVECAAIFAIFTSQAWNMAFSLYQSFRTIPGDLLEAAAMFRLSPWQRFWRLEV 193 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P++MPGL+WNMMMSMSGGWFFVVASE I V I LPGIGSYIALAI++QDL AI +A+ Sbjct: 194 PYAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQDLAAIGWAI 253 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 + ML I LYDQLLFRP++ W+++FR E SW+L L R++ + + + Sbjct: 254 VAMLAGILLYDQLLFRPLVAWADRFRFETLAQDKLPQSWLLDLLRRSAWAGALLAQAAAL 313 Query: 306 FSPLSNNVKKLCRTLG-VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 S RTL R P + + R + L + VA+ A + Sbjct: 314 GS----------RTLAWGARGRAPAPARPI--DPRRARWLGRARDTAIVLVALA-ALLRV 360 Query: 365 GYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 GY V+ + +V++V+WLG +TM RV+VLI +A+++W+P+GI IG P ++ QP AQ Sbjct: 361 GYFVHSEVGWSEVVHVLWLGTLTMVRVIVLIALAALVWVPIGIRIGLNPDLARIAQPVAQ 420 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 LAAFPAN+ FPL V ++ + LNP +WLS L+IFGTQWYILFNVIAGAS P + + A Sbjct: 421 FLAAFPANLMFPLAVMLIARFGLNPEIWLSPLLIFGTQWYILFNVIAGASGIPTELRLAA 480 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +F + GW W+ ++P +FP +TG +TA GG+WNASIVSE +WG + TGLG+YI Sbjct: 481 RNFGLRGWLLWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTIVATGLGSYI 540 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 AE+T +G FP + LG+++M FV+ NR LW+ LY RL Sbjct: 541 AETTARGDFPRIALGIVVMALFVVGFNRLLWNRLYQLAQERTRL 584 >gi|296137104|ref|YP_003644346.1| binding-protein-dependent transport systems inner membrane component [Thiomonas intermedia K12] gi|294341397|emb|CAZ89814.1| putative ABC-type transport system, permease component [Thiomonas sp. 3As] gi|295797226|gb|ADG32016.1| binding-protein-dependent transport systems inner membrane component [Thiomonas intermedia K12] Length = 570 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 257/572 (44%), Positives = 367/572 (64%), Gaps = 14/572 (2%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 PN DL+A LVIG++ I+ H ++ VP + + V ++L LP+YA T LRML+A Sbjct: 12 LPNRRDLIALPLVIGMLLIIGHASRQMAVPFHLGETVALSLKPADLPEYALYTVLRMLAA 71 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 + S +FT +YA +AA +R ++VP+LD++QS+PILG+L+ TV F+ L+PG ++G + Sbjct: 72 LAASTVFTLIYAWIAANNRYAEKIMVPLLDVLQSVPILGYLSITVTGFIALFPGSMLGLQ 131 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 A IFA+FTSQ WNMTFS+YQSL +PRDL E + +RL+ WQ+FW L +P++ PGL+WN Sbjct: 132 FAVIFAVFTSQAWNMTFSLYQSLKTVPRDLTEAATLYRLNAWQRFWKLELPYAAPGLLWN 191 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MMSMSGGWFFVVA+E + V + +PGIGSYIA AI ++L AI +A+L M VI Y Sbjct: 192 AMMSMSGGWFFVVAAEALTVAGQQVSVPGIGSYIAAAIAAKNLGAIGWAILAMALVILSY 251 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 D LLFRP++ W++KFRL+ T + S VL R+T + + + + Sbjct: 252 DFLLFRPIVAWADKFRLDNTVSVDAPRSVVLDFLRRTRLTQRLARLPAVLW-------EM 304 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R L + H RV +++ + F + VA+ + + F + Sbjct: 305 SVRLLPAVPLHKSPQRAPSVWGDRV-FVVSMVLFTLGLIVALFLV------LPRDFGWLQ 357 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V +V+ LG T +V VL+ I+++IW+PVGIW+G RP ++ QP AQ LAAFPAN+ FP Sbjct: 358 VGHVMLLGAFTALKVFVLVAISALIWVPVGIWVGLRPRWAAVAQPVAQFLAAFPANLLFP 417 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + ++HLN N++ + LMI G+QWY+LF+VI ASA P+D +E + + GW WR Sbjct: 418 LVVVAIVHWHLNVNVFTAPLMILGSQWYVLFSVIGAASALPSDLREAGRNLGLRGWLLWR 477 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + LP +FP +VTGA+TA GGAWNASIV+EV SWG L TGLGAYI E+T++G +V Sbjct: 478 KLYLPAVFPGFVTGALTASGGAWNASIVAEVVSWGSHTLVATGLGAYITEATQQGQTLKV 537 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV +M +V+A+NR +WH LY +RL Sbjct: 538 GLGVGVMALYVIAINRLVWHRLYKIAATRVRL 569 >gi|255019932|ref|ZP_05292006.1| binding-protein-dependent transport systems inner membrane component [Acidithiobacillus caldus ATCC 51756] gi|254970591|gb|EET28079.1| binding-protein-dependent transport systems inner membrane component [Acidithiobacillus caldus ATCC 51756] Length = 572 Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust. Identities = 257/565 (45%), Positives = 365/565 (64%), Gaps = 21/565 (3%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +LV+G +L H ++ +VP + + +PI+ +L A TTLRML+A+ SL+FT Sbjct: 25 LLVLGFF-VLAHATRQMSVPFTLGEALPISTRPSALVDDALYTTLRMLAAVAASLIFTIF 83 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 Y LAAK+R G +L+P+LDI+QS+PILG+L+ TV F+ L+PG +IG +LA +FA+FTS Sbjct: 84 YGLLAAKNRYAGKILIPLLDILQSVPILGYLSITVTGFIALFPGSLIGVQLAVVFAVFTS 143 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 QVWNMTF+ YQ+L +P+DL+E +R +RL+ WQ+F+ L +PF++P L+WN MMSMSGGWF Sbjct: 144 QVWNMTFAFYQALITLPKDLDEAARLYRLNAWQRFFRLELPFAVPPLLWNTMMSMSGGWF 203 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 FVVA+E I V + +PGIGSYIA+AI +++L A+ +A+L ML VI LYD LLFRP++ Sbjct: 204 FVVAAEAITVAGHEVMVPGIGSYIAMAIAQKNLAAVFWAILAMLLVIGLYDFLLFRPVVA 263 Query: 266 WSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY---SSWNFFSPLSNNVKKLCRTLGV 322 W++KF+LE + SWVL R++ + + W F R L Sbjct: 264 WADKFKLETGADLQRPRSWVLDFLRRSRLAQAVAMVPAELWEFS----------LRILPP 313 Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 R H+ + +R + +F V + G WQ + F +++V++L Sbjct: 314 GRPHW------VGEEKRRPWADVLFLLLVGGVLVYGF-WQLYATLARSFDLTTLVHVLFL 366 Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 G +T RV+VL+ ++ +IW+PVGI +G RP +S +IQ Q LAAFPAN+ FP+VV + Sbjct: 367 GLVTGLRVMVLVALSLLIWVPVGILVGLRPGLSGRIQAAIQFLAAFPANLLFPMVVLAIL 426 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 ++HLN N+W+S LMI G+QWY+LFNVI A+A P D KE A + + GW W+ ++LPG Sbjct: 427 HWHLNVNIWVSPLMILGSQWYVLFNVIGAAAALPADLKEAARNLGLRGWLLWKRLLLPGT 486 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 FP VTG ITA GGAWNASIV+EV SWG+ L TGLGAYI +T G+ V LG+ +M Sbjct: 487 FPGTVTGGITASGGAWNASIVAEVVSWGNHTLVATGLGAYITLATAAGNLNAVALGIGVM 546 Query: 563 CCFVLALNRFLWHPLYLYGTRCLRL 587 +V+ +NR W LY R LRL Sbjct: 547 SFYVVVVNRLFWRRLYDLAARRLRL 571 >gi|134094843|ref|YP_001099918.1| putative transmembrane ABC transporter protein [Herminiimonas arsenicoxydans] gi|133738746|emb|CAL61793.1| putative ABC-type transport system, permease component [Herminiimonas arsenicoxydans] Length = 577 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 259/565 (45%), Positives = 362/565 (64%), Gaps = 11/565 (1%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 I PN +D LV+ ++ + G + + P + + PI+LD LP Y RT LRM Sbjct: 17 ISPNRWDWALLPLVLIVLLAVAFGAAQMSRPFMVGEATPISLDPAYLPYYLLRTILRMFM 76 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+ SLLF+FV+A +AAK R +++P+LDI+QS+PILGF + F+ +PG ++G Sbjct: 77 ALGFSLLFSFVFAAIAAKYRAAEKIMIPMLDILQSVPILGFQAIAIAPFIAFFPGNLLGV 136 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIFTSQ WNM FS+YQS+ +P +L E +R FRLSGWQ+FW + +P++MPGL+W Sbjct: 137 ECAAIFAIFTSQAWNMAFSLYQSIRTVPSELNEAARVFRLSGWQRFWRMELPYAMPGLLW 196 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSGGWFF+VA+E I V I LPGIG+YIA+AI+ +DL AIL+A+ ML I L Sbjct: 197 NMMMSMSGGWFFLVAAEAISVAGQDIKLPGIGAYIAVAIEARDLHAILWAIGAMLAGIVL 256 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQL FRP++ W++KFR E + G SW+L R++ ++R W+ Sbjct: 257 YDQLFFRPLLAWADKFRFEESQGDTAQRSWLLDWGRRSRWMRAFSARVWSL--------- 307 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 L RTLG Q S + + W +V ++ ++ +I + Sbjct: 308 -LRRTLGWFSLRHDGTSPQ-TSARTIHPWWPRIWDGLVLFASLLAVFRLALFIHSDIGLT 365 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L+V+ LG IT+ RV++LI +AS+IW+P+ +WIG RP S +Q AQ LAAFP N+ F Sbjct: 366 EILHVVKLGFITLLRVLLLIGLASLIWVPIAVWIGLRPKYSQCVQGAAQFLAAFPVNLMF 425 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PLVV + LNP++WLS LM+FGTQWYILFNV+AGA+ PN+ + + + + GW W Sbjct: 426 PLVVYLLVSMQLNPDIWLSPLMVFGTQWYILFNVVAGAATIPNELRLASDNLGLKGWLKW 485 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 + + LP +FP Y+TGAITA GG+WNASIV+E +WG L GLG+YI + T+ G F Sbjct: 486 KRVYLPAVFPSYITGAITASGGSWNASIVAEYVTWGKTTLIADGLGSYIKQMTDIGDFHR 545 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYL 579 + LG+ +MC FV+ LNRF W LYL Sbjct: 546 IGLGIGVMCIFVMLLNRFFWRKLYL 570 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 17/164 (10%) Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFK 480 A +A FP N+ L V C + + IF +Q W + F++ P++ Sbjct: 123 APFIAFFPGNL---LGVECAAIFA-----------IFTSQAWNMAFSLYQSIRTVPSELN 168 Query: 481 EVASSFHITGW-RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 E A F ++GW R+WR + LP P + + + G W + +E S ++ G+ Sbjct: 169 EAARVFRLSGWQRFWR-MELPYAMPGLLWNMMMSMSGGWFFLVAAEAISVAGQDIKLPGI 227 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 GAYIA + E ++ + M ++ ++ + PL + + Sbjct: 228 GAYIAVAIEARDLHAILWAIGAMLAGIVLYDQLFFRPLLAWADK 271 >gi|258542332|ref|YP_003187765.1| anion transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256633410|dbj|BAH99385.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256636469|dbj|BAI02438.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256639522|dbj|BAI05484.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642578|dbj|BAI08533.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645633|dbj|BAI11581.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648686|dbj|BAI14627.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651739|dbj|BAI17673.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654730|dbj|BAI20657.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 582 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 263/536 (49%), Positives = 358/536 (66%), Gaps = 12/536 (2%) Query: 52 VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111 +PI LD+ LP YA RTT+RM +A+ SL+FTFVYATLAAKSRR G +LVP+LD++QS+P Sbjct: 58 MPIHLDMWHLPGYALRTTIRMFAALACSLVFTFVYATLAAKSRRAGQILVPLLDVLQSVP 117 Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 ILGFL+FT+ +F+ L+PG+++GAE AAIF IFTSQ WNM MYQ L ++P +LEE +R Sbjct: 118 ILGFLSFTITFFLGLFPGRILGAECAAIFTIFTSQAWNMALGMYQGLRSVPPELEETARC 177 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231 F L+ WQKFW L VP ++P LVWN MMSM+GGWF VV SE I VG T I LPGIGSY+ + Sbjct: 178 FGLTSWQKFWRLEVPCTIPSLVWNAMMSMAGGWFMVVYSESITVGSTDITLPGIGSYVGM 237 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 AI +Q++ A+ A++ M+ VI +YDQ+LFRP+ W+ +FRLE + W L L R+ Sbjct: 238 AIDQQNIGAVAAAIVAMMVVILVYDQVLFRPLAAWATRFRLESVNATQVVEPWFLRLVRR 297 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 T LR G N + + R + + + +++ +++ D W+ Sbjct: 298 TRLLRMCG-----------NALLSVGRRISYLPLGSRPDTMRVDADESTGGP-DWLWWGF 345 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + V +G +WQ Y H+T + YV LG IT+ RVV ++++AS+IW+PVGIW G Sbjct: 346 LLLVCLGASWQVWDYAHTHYTLGQIAYVFGLGGITLVRVVSMLVLASLIWVPVGIWCGLD 405 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P + + Q AQ AAFPAN+FFP+ V + ++ L P++WL+ LMI G QWYILFNVIAG Sbjct: 406 PTRARRAQILAQYGAAFPANLFFPVFVVVIVHFRLTPDIWLTPLMILGAQWYILFNVIAG 465 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 AS+FP++ EV + + GW WWR IILPGI PYY+ G + A GGAWNA+I SEVA WG Sbjct: 466 ASSFPSNLLEVGRNLEVRGWFWWRRIILPGIAPYYLVGVMAAAGGAWNAAIASEVAQWGE 525 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L GLGAY+A+ST+ G+ V LG ++MC FV+ N +W PL + R L+L Sbjct: 526 TTLTAHGLGAYVAQSTQLGNISNVGLGTVVMCVFVMFTNALVWRPLSDFVARRLKL 581 >gi|329113495|ref|ZP_08242276.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] gi|326697320|gb|EGE48980.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] Length = 582 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 262/536 (48%), Positives = 357/536 (66%), Gaps = 12/536 (2%) Query: 52 VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111 +PI LD+ LP YA RTT+RM +A+ SL+FTFVYATLAAKSRR G +L+P+LD++QS+P Sbjct: 58 MPIHLDMWHLPGYALRTTIRMFAALACSLVFTFVYATLAAKSRRAGQILIPLLDVLQSVP 117 Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 ILGFL+FT+ +F+ L+PG+++GAE AAIF IFTSQ WNM MYQ L ++P +LEE +R Sbjct: 118 ILGFLSFTITFFLGLFPGRILGAECAAIFTIFTSQAWNMALGMYQGLRSVPPELEETARC 177 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231 F L+ WQKFW L VP ++P LVWN MMSM+GGWF VV SE I VG T + LPGIGSY+ + Sbjct: 178 FGLTSWQKFWRLEVPCTIPSLVWNAMMSMAGGWFMVVYSESITVGSTDVTLPGIGSYVGM 237 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 AI +Q++ A+ A++ M+ VI +YDQ+LFRP+ W+ +FRLE + W L L R+ Sbjct: 238 AIDQQNIGAVAAAIVAMMVVILVYDQVLFRPLAAWATRFRLESVNTAQVVEPWFLRLVRR 297 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 T LR G N + + R + + + + ++ S D W+ Sbjct: 298 TRLLRMGG-----------NALLSVGRRISYLPLGARPDTVHATADDN-SDGADWLWWGF 345 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + V + +WQ Y H+T+ + YV LG IT+ RVV ++++AS+IW+PVGIW G Sbjct: 346 LLIVCLAASWQVWAYAHTHYTFGQIAYVFGLGGITLLRVVSMLVLASLIWVPVGIWCGLD 405 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P + + Q AQ AAFPAN+FFP+ V + ++HL P++WL+ LMI G QWYILFNVIAG Sbjct: 406 PMRARRAQILAQYGAAFPANLFFPVFVVVIVHFHLTPDIWLTPLMILGAQWYILFNVIAG 465 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 AS+FP++ EV + + GW WWR IILPGI PYY+ G + A GGAWNA+I SEVA WG Sbjct: 466 ASSFPSNLLEVGRNLEVRGWFWWRRIILPGIAPYYLVGVMAAAGGAWNAAIASEVAQWGE 525 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L GLGAY+A+ST+ G+ V LG ++MC FV+ N +W PL + R L+L Sbjct: 526 TTLTAHGLGAYVAQSTQLGNISNVGLGTVVMCIFVMFTNALVWRPLSDFVARRLKL 581 >gi|86605760|ref|YP_474523.1| taurine ABC transporter permease protein [Synechococcus sp. JA-3-3Ab] gi|86554302|gb|ABC99260.1| NitT/TauT family ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 575 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 242/529 (45%), Positives = 333/529 (62%), Gaps = 12/529 (2%) Query: 51 IVP-ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109 +VP I LD +LP YA+R+TLRM A+ S LFT +Y +AAKSR +L+P+LDI+QS Sbjct: 49 VVPHIDLDPRNLPYYAARSTLRMFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDILQS 108 Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169 +P+LGFL+ TV F+ L+PG ++G E A+IFAIFTSQVWNMTFS YQSL +P++L E Sbjct: 109 VPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAV 168 Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 +RLSGWQ+F L VP +M GL+WN MMS GGWFFV ASE I V + LPG+GSY+ Sbjct: 169 TLYRLSGWQRFVQLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYV 228 Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLF 289 A++ +DL + +A+LTM VI L DQL +RP++ WS+KFRLE++ G +SW+ L Sbjct: 229 EAAVQAEDLPKLGWALLTMAVVILLVDQLFWRPLVAWSDKFRLEQSAGAAAPESWLYDLL 288 Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349 R IG N+ +P +L L +R+ P N + +R +L + Sbjct: 289 TTARIPRLIG----NWLAPSRELADRLLSHLTRLRWGDPPN---PEAERRRERLLTQLSW 341 Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 + G+ I I + ++ + +VL LG +T+ RV VL++ A++IW P+G+ IG Sbjct: 342 AAIAGIGIWIVY----FVTTTVGFGEVLLTFGLGILTLLRVSVLLVFATVIWTPIGVAIG 397 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 F P ++ +QP Q LAAFPAN FP ++ LLM G QWYILFN I Sbjct: 398 FNPGLAKLLQPVVQFLAAFPANFLFPFATLFFIRTQISIEWGSILLMSLGAQWYILFNSI 457 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AGA + P D +E+A + GW+ W+ +I+PGIF +VTG ITA GGAWNASIVSE+ +W Sbjct: 458 AGAQSIPTDLREMAVDVGLRGWQRWQKLIIPGIFSAWVTGGITASGGAWNASIVSEIVAW 517 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 G L+ TGLG YIAE+T G +P + LG+ +M FV+ +NR W LY Sbjct: 518 GSTTLKATGLGTYIAEATAVGDWPRITLGIGMMSLFVVGINRLFWRRLY 566 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 1/132 (0%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 S+ IF +Q W + F+ P + E + + ++GW+ + + +P + A+ Sbjct: 137 SIFAIFTSQVWNMTFSFYQSLRTLPQELVEAVTLYRLSGWQRFVQLEVPAAMVGLIWNAM 196 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + GG W SE S + GLG+Y+ + + P++ +L M +L +++ Sbjct: 197 MSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALLTMAVVILLVDQ 256 Query: 572 FLWHPLYLYGTR 583 W PL + + Sbjct: 257 LFWRPLVAWSDK 268 >gi|291456097|ref|ZP_06595487.1| ABC transporter, permease protein, NitT/TauT family [Bifidobacterium breve DSM 20213] gi|291382506|gb|EFE90024.1| ABC transporter, permease protein, NitT/TauT family [Bifidobacterium breve DSM 20213] Length = 596 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 248/571 (43%), Positives = 351/571 (61%), Gaps = 13/571 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 RI + + + + G+I +L I E P+ + ++ ++ LP YA R+ RM Sbjct: 33 RIAADALVIAGILALFGLIAWILPAIGEPIGPKGVPS--SVSTNLADLPYYALRSVFRMF 90 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTFVY T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 91 VALFFSLVFTFVYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + PR+L+E +RS RL+ WQ+FW L VP +M L+ Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPRELDEAARSLRLTRWQRFWTLDVPNAMIPLL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++TM+ V+ Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAEENLAAICWAIVTMVAVVL 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + F P+ Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSAVLTIIRQSHIDEMLD----RLFQPVGELF 326 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI-FWFCVVCGVAIGIAWQSIGYIVNHFT 372 L R LG +P + + S +LD+ F VV A G+ + + I Sbjct: 327 DTLTRPLGRTGGRWP-----VETKSTRSRVLDVLFMVVVVTASAFGVI-ELMLVIHRDAG 380 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + ++ + + LG +T RV +L I+ S+IW+PVG IG P +S +QP Q+LA+FP+N Sbjct: 381 FDELGHALALGMLTFLRVALLTIVCSVIWVPVGALIGMNPRVSRFMQPIVQVLASFPSNF 440 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V +N N LLM GTQWYILFNVIAGAS P+D +E+A SF + W+ Sbjct: 441 TFPFVTLWFVACSVNINWGSILLMALGTQWYILFNVIAGASQIPDDLREMAHSFQLGRWQ 500 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G Sbjct: 501 RWRELILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGQHTLTASGLGAYIAEATENGDT 560 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++GV +M FV+A+NR W+PL R Sbjct: 561 VRTIIGVAVMSVFVVAVNRLFWNPLQRLAER 591 >gi|86607766|ref|YP_476528.1| taurine ABC transporter permease protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556308|gb|ABD01265.1| NitT/TauT family ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 575 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 245/529 (46%), Positives = 337/529 (63%), Gaps = 12/529 (2%) Query: 51 IVP-ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109 +VP I LD +LP YA+R+TLRM A+ S LFT +Y +AAKSR +L+P+LD++QS Sbjct: 49 VVPRIDLDPRNLPYYAARSTLRMFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDVLQS 108 Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169 +P+LGFL+ TV F+ L+PG ++G E A+IFAIFTSQVWNMTFS YQSL +P++L E + Sbjct: 109 VPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAA 168 Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 +RLSGWQ+F L VP +M GL+WN MMS GGWFFV ASE I V + LPG+GSY+ Sbjct: 169 TLYRLSGWQRFTQLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYV 228 Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLF 289 A++ +DL + +A+LTM GVI L DQL +RP++ WS+KFRLE+++G +SW+ L Sbjct: 229 EAAVQAEDLPKLGWALLTMAGVILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLL 288 Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349 R IG SW SPL+ V +L L R H+ + L + +R +L Sbjct: 289 TTARIPRLIG--SW--LSPLAELVDRLLSYL--TRPHWVDP-LSPEAERRRERLLTQLSR 341 Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 + G+ I I + ++ + +V+ LG +T+ RV VL++ A++IW P+G+ IG Sbjct: 342 AAIGGIGIWIVY----FVATTVGFGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIG 397 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 F P ++ +QP Q LAAFPAN FP ++ LLM G QWYILFN I Sbjct: 398 FNPKLAKLLQPVVQFLAAFPANFLFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSI 457 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AGA + P D +E+A + GW+ WR +I+PGIF +VTG +TA GGAWNASIVSE+ +W Sbjct: 458 AGAQSIPTDLREMAVDVGLRGWQRWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAW 517 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 G L TGLG YIAE+T G +P + LG+ +M FV+ +NR W LY Sbjct: 518 GSTTLTATGLGTYIAEATAVGDWPRITLGIGMMSLFVVGINRLFWRRLY 566 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 1/132 (0%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 S+ IF +Q W + F+ P + E A+ + ++GW+ + + +P + A+ Sbjct: 137 SIFAIFTSQVWNMTFSFYQSLRTLPQELVEAATLYRLSGWQRFTQLEVPAAMVGLIWNAM 196 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + GG W SE S + GLG+Y+ + + P++ +L M +L +++ Sbjct: 197 MSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALLTMAGVILLVDQ 256 Query: 572 FLWHPLYLYGTR 583 W PL + + Sbjct: 257 LFWRPLVAWSDK 268 >gi|311063794|ref|YP_003970519.1| ABC transporter permease [Bifidobacterium bifidum PRL2010] gi|310866113|gb|ADP35482.1| Permease protein of ABC transporter system [Bifidobacterium bifidum PRL2010] Length = 593 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 243/574 (42%), Positives = 354/574 (61%), Gaps = 19/574 (3%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RRI ++ + + G++ LL I E P + V + D+H LP YA R+ RM Sbjct: 31 RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPSTV--SDDLHLLPYYALRSVFRM 88 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ +SL+F+F+Y AA+ RRL MVL+P+LDI+QS+PILGFL+ TV +M L+PG ++ Sbjct: 89 FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM L Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN MMS+ GGWFF+ ASEMI V + LPG+GS++A+A + + L +L+A++TM+ V+ Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFFSPL 309 L D LL++P+ W+ KFR+ + + S VL + R+ ++ L +G P+ Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSVLRRSGISDALALVG-------RPI 321 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 +N + L R LG +P +R + LDI + ++ + W + +I + Sbjct: 322 ANLMFWLTRPLGRTGARWPA-----AGTRRRT--LDIAFMALMAVACLAGLWMLVRFISD 374 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +V + + LG IT RV +L ++ SIIW+P+G+ IG P IS +QP Q+LA+FP Sbjct: 375 GEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFVQPLVQVLASFP 434 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 +N FP V +H++ + LLM GTQWYILFNVIAGASA P+D +E +FH+ Sbjct: 435 SNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLD 494 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 + W +ILP +F + TG ITA GGAWNASIVSE+ ++GH L GLG YIA +T Sbjct: 495 TRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAV 554 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G + ++GV +M FV+ +NR W PL Y R Sbjct: 555 GDTGKTIIGVAVMSVFVVGVNRLFWRPLQTYAER 588 >gi|310286892|ref|YP_003938150.1| nitrate/sulfonate/taurine transport system, permease protein [Bifidobacterium bifidum S17] gi|309250828|gb|ADO52576.1| nitrate/sulfonate/taurine transport system, permease protein [Bifidobacterium bifidum S17] Length = 593 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 242/574 (42%), Positives = 354/574 (61%), Gaps = 19/574 (3%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RRI ++ + + G++ LL I E P + V + D+H LP YA R+ RM Sbjct: 31 RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPSTV--SDDLHLLPYYALRSVFRM 88 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ +SL+F+F+Y AA+ RRL MVL+P+LDI+QS+PILGFL+ TV +M L+PG ++ Sbjct: 89 FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM L Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN MMS+ GGWFF+ ASEMI V + LPG+GS++A+A + + L +L+A++TM+ V+ Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFFSPL 309 L D LL++P+ W+ KFR+ + + S VL + R+ ++ L +G P+ Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSVLRRSGISDALALVG-------RPI 321 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 ++ + L R LG +P +R + LDI + ++ + W + +I + Sbjct: 322 ADLMFWLTRPLGRTGARWPA-----AGTRRRT--LDIAFMALMAVACLAGLWMLVRFISD 374 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +V + + LG IT RV +L ++ SIIW+P+G+ IG P IS +QP Q+LA+FP Sbjct: 375 GEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFVQPLVQVLASFP 434 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 +N FP V +H++ + LLM GTQWYILFNVIAGASA P+D +E +FH+ Sbjct: 435 SNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLD 494 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 + W +ILP +F + TG ITA GGAWNASIVSE+ ++GH L GLG YIA +T Sbjct: 495 TRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAV 554 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G + ++GV +M FV+ +NR W PL Y R Sbjct: 555 GDTGKTIIGVAVMSVFVVGVNRLFWRPLQAYAER 588 >gi|320450800|ref|YP_004202896.1| ABC transporter permease [Thermus scotoductus SA-01] gi|320150969|gb|ADW22347.1| ABC transporter, permease protein [Thermus scotoductus SA-01] Length = 553 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/535 (45%), Positives = 332/535 (62%), Gaps = 24/535 (4%) Query: 52 VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111 PI+LD LP+YA RT RM A+++S LFT VYA LAAK+R L L+ +LDI+QS+P Sbjct: 42 TPISLDPRHLPEYALRTAFRMGVALLLSTLFTLVYAPLAAKTR-LEPFLIAVLDILQSVP 100 Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 ILGFL +V L+PGK +G ELAAIFA+FTSQ WNM FS YQSL +PR+LEE +R Sbjct: 101 ILGFLAASVAALSGLFPGKALGFELAAIFAVFTSQAWNMAFSFYQSLKTLPRELEEAARL 160 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231 +RL+ Q+F L +P+++PGLVWN MMSMSGGWFFVVASE I VG T + LPG+GSY+A Sbjct: 161 YRLTPPQRFLRLELPYALPGLVWNAMMSMSGGWFFVVASEAISVGKTEVDLPGVGSYLAR 220 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 A+ + ++ A+ YA+L ML I LYDQLLFRP++ WS +F+ E G A SWVL L R+ Sbjct: 221 ALAQGNMEALAYALLAMLLTILLYDQLLFRPLVAWSERFKYEERPGEATARSWVLDLLRR 280 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 + R +G W + L +RFH P + L + Sbjct: 281 SRATRRLG--EWLAEALLER----------ALRFHPPR-----------ALGLPPWLGPA 317 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + ++ ++ + L I LG T RV+ ++++A+ +W+PVG+ +G R Sbjct: 318 LLTALGLLGLEAAARLLLPLGPGEWLRAIALGFFTFLRVMGILLLATAVWVPVGVLLGLR 377 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P ++ ++Q Q LAAFPAN+ +P + Y L+ ++ + LM GTQWYILFNV AG Sbjct: 378 PRVAVRVQALLQFLAAFPANLLYPFAAYLLLRYRLSMEVFSAFLMALGTQWYILFNVTAG 437 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A+A P D E A ++ ++G R WR ++LPG+FPY VTG +TA GG WNASIV+EV WG Sbjct: 438 ATALPADLLEAARAYRLSGARLWRRLLLPGVFPYLVTGLVTASGGTWNASIVAEVVQWGP 497 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 L TGLGAYI +TE G ++LG+ +M V+ LNR LW LY + R Sbjct: 498 HRLEATGLGAYITRATEAGDERRLLLGIAMMSLMVVTLNRLLWRRLYQWAEERFR 552 >gi|313139598|ref|ZP_07801791.1| NitT/TauT family ABC transporter [Bifidobacterium bifidum NCIMB 41171] gi|313132108|gb|EFR49725.1| NitT/TauT family ABC transporter [Bifidobacterium bifidum NCIMB 41171] Length = 570 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 242/574 (42%), Positives = 353/574 (61%), Gaps = 19/574 (3%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RRI ++ + + G++ LL I E P + V + D+H LP YA R+ RM Sbjct: 8 RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPSTV--SDDLHLLPYYALRSVFRM 65 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ +SL+F+F+Y AA+ RRL MVL+P+LDI+QS+PILGFL+ TV +M L+PG ++ Sbjct: 66 FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 125 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM L Sbjct: 126 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 185 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN MMS+ GGWFF+ ASEMI V + LPG+GS++A+A + + L +L+A++TM+ V+ Sbjct: 186 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 245 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFFSPL 309 L D LL++P+ W+ KFR+ + + S VL + R+ ++ L +G P+ Sbjct: 246 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSILRRSGISDALALVG-------RPI 298 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 ++ + L R LG +P +R + LDI + ++ + W + +I + Sbjct: 299 ADLMFWLTRPLGRTGARWPA-----AGTRRRT--LDIAFMALMAVACLAGLWMLVRFISD 351 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +V + + LG IT RV +L ++ SIIW+P+G+ IG P IS QP Q+LA+FP Sbjct: 352 GEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFAQPLVQVLASFP 411 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 +N FP V +H++ + LLM GTQWYILFNVIAGASA P+D +E +FH+ Sbjct: 412 SNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLD 471 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 + W +ILP +F + TG ITA GGAWNASIVSE+ ++GH L GLG YIA +T Sbjct: 472 TRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAV 531 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G + ++GV +M FV+ +NR W PL Y R Sbjct: 532 GDTGKTIIGVAVMSVFVVGVNRLFWRPLQAYAER 565 >gi|224282450|ref|ZP_03645772.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium bifidum NCIMB 41171] Length = 593 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 242/574 (42%), Positives = 353/574 (61%), Gaps = 19/574 (3%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RRI ++ + + G++ LL I E P + V + D+H LP YA R+ RM Sbjct: 31 RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPSTV--SDDLHLLPYYALRSVFRM 88 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ +SL+F+F+Y AA+ RRL MVL+P+LDI+QS+PILGFL+ TV +M L+PG ++ Sbjct: 89 FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM L Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN MMS+ GGWFF+ ASEMI V + LPG+GS++A+A + + L +L+A++TM+ V+ Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFFSPL 309 L D LL++P+ W+ KFR+ + + S VL + R+ ++ L +G P+ Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSILRRSGISDALALVG-------RPI 321 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 ++ + L R LG +P +R + LDI + ++ + W + +I + Sbjct: 322 ADLMFWLTRPLGRTGARWPA-----AGTRRRT--LDIAFMALMAVACLAGLWMLVRFISD 374 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +V + + LG IT RV +L ++ SIIW+P+G+ IG P IS QP Q+LA+FP Sbjct: 375 GEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFAQPLVQVLASFP 434 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 +N FP V +H++ + LLM GTQWYILFNVIAGASA P+D +E +FH+ Sbjct: 435 SNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLD 494 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 + W +ILP +F + TG ITA GGAWNASIVSE+ ++GH L GLG YIA +T Sbjct: 495 TRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAV 554 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G + ++GV +M FV+ +NR W PL Y R Sbjct: 555 GDTGKTIIGVAVMSVFVVGVNRLFWRPLQAYAER 588 >gi|300309875|ref|YP_003773967.1| anion ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072660|gb|ADJ62059.1| ABC-type anion transport system, duplicated permease component protein [Herbaspirillum seropedicae SmR1] Length = 581 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/572 (42%), Positives = 347/572 (60%), Gaps = 18/572 (3%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D L ++ G++ LH + V D D + + +P YA RT LRM A SL Sbjct: 22 DALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAFAFSL 81 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 F LAAKSRR +++P LDI+QS+P+LGFL+ TV FM L+PG ++G E AAIF Sbjct: 82 FFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVECAAIF 141 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFT QVWNM F Y S+ IP D++E + ++RL+ WQ+F + +P S L+WN MMS Sbjct: 142 AIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNSMMSF 201 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 GGWFFV SE I V + + LPG+GSY+A AI + D A L+A++ ML +I + DQL++ Sbjct: 202 GGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSDQLVW 261 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KF++E T P SWV L R + ++ W PL + + + Sbjct: 262 RPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQ---PLGDWLAR--HRP 316 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ----SIGYIVNHFTYQDV 376 G P + +RV L +CG+ I A + +I + ++ Sbjct: 317 GTSAAPTPARITRERWTKRVLTGL-------ICGLLIFEALRGLVAAIDALHGAMSWSLF 369 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +++WLG +TM RV+ + +IA++IW PVG+WIG +PHI+ QP AQ+ A+FP N+ FPL Sbjct: 370 GHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPL 429 Query: 437 VVSCVSYYHLNPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 VV +++ N W S+L+I GTQWYILFNVIAGA A PND KE A + ++ W W+ Sbjct: 430 VVGWFVAANVSMN-WGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 +ILP IFP++VTGA TA GGAWNASIV+E+ASWG + L+ GLGAYI+ T+ G P + Sbjct: 489 TLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLI 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + + +M FV+ +N+F+W LY + R RL Sbjct: 549 IASIGVMSMFVVLMNKFVWRRLYAFAERRFRL 580 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 5/207 (2%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LR+L+ VI+ L + P+ I S P+ +TF +V + + Sbjct: 379 TMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPV--NMTFPLV--VGWF 434 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + +I I W + F++ IP DL+E +R + LS W + L +P Sbjct: 435 VAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILPA 494 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 P V + G W + +E+ GD + G+G+YI+ K D I+ ++ Sbjct: 495 IFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIGV 554 Query: 248 MLGVIFLYDQLLFRPMIVWSN-KFRLE 273 M + L ++ ++R + ++ +FRL+ Sbjct: 555 MSMFVVLMNKFVWRRLYAFAERRFRLD 581 >gi|320450206|ref|YP_004202302.1| ABC transporter permease [Thermus scotoductus SA-01] gi|320150375|gb|ADW21753.1| ABC transporter, permease protein [Thermus scotoductus SA-01] Length = 557 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 251/535 (46%), Positives = 340/535 (63%), Gaps = 22/535 (4%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 PI+LD LP+Y RT RM A ++S LFT VYA LAAK+R L L+ +LDI+QS+PI Sbjct: 43 PISLDPLKLPEYTLRTAFRMGVAFLLSTLFTLVYAPLAAKTR-LEPFLISLLDILQSVPI 101 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 LGFL T F L+PG+ +G ELAAIFA+FTSQ WN+ FS YQSL +PR+L+E + F Sbjct: 102 LGFLAATAGAFAALFPGRALGYELAAIFAVFTSQAWNIAFSFYQSLKTLPRELDEAATLF 161 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 RLS WQ+F+ L +PF++PGLVWN MMSMSGGWFFVVASE I VG T + LPGIGSY+A A Sbjct: 162 RLSPWQRFFRLELPFALPGLVWNAMMSMSGGWFFVVASEAIAVGKTQVELPGIGSYLATA 221 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292 I + + A+L A L+ML I YDQLLFRP++ WS +F+ E G+ PA SWVL L R+T Sbjct: 222 IAQGNGRAVLLAALSMLVAILAYDQLLFRPLVAWSQRFKYEERPGLEPARSWVLDLLRRT 281 Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 + LR I ++ FS + +L R R P+ L I W + Sbjct: 282 HTLRGIAEAT---FSWALEALFQLERRRPPRRLILPQWVPVLPLLLLGGIGAFILWRQL- 337 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 Q +G++ +V V LG T RV+ ++++A+ IW+PVGI +G RP Sbjct: 338 ---------QPLGWL-------EVARVFLLGFFTFLRVMGVLLLATAIWVPVGILLGLRP 381 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 ++ +++ QLLAAFP N+ +PL+ + +HL+ ++ + LM GTQWYILFN +AG+ Sbjct: 382 RVAQRVEALLQLLAAFPVNLLYPLLALFLLRHHLSLEVFSAFLMALGTQWYILFNAVAGS 441 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 A P D KE A SF + G WR ++LPG FP+ +TG ITA GG WNA+IV+EV WG + Sbjct: 442 MALPEDLKEAARSFGLKGLTLWRRLLLPGTFPHILTGLITASGGTWNAAIVAEVVQWGSL 501 Query: 533 HLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 L+ TGLG+YIA T E+G P ++LG+ +M +V+ +NRF+W LY R Sbjct: 502 TLQATGLGSYIARWTLEEGQGPHLLLGIAVMSLYVVVINRFVWRRLYRLAEERFR 556 >gi|171914592|ref|ZP_02930062.1| NitT/TauT family ABC transporter, permease protein [Verrucomicrobium spinosum DSM 4136] Length = 582 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 240/569 (42%), Positives = 345/569 (60%), Gaps = 10/569 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 DL+ + ++G++ +LH + V D P+ V ++P YA RT LRM A SL Sbjct: 21 DLVVMLALLGLLWSVLHFGRGMWVHFDEAKAPPLDTSVWNIPYYAGRTLLRMWMAFACSL 80 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FTFV AAK+R V++P LD++QS+P+LGFL+ TV FM L+PG + G E A IF Sbjct: 81 VFTFVVGYAAAKNRVARAVILPALDVLQSVPVLGFLSATVTGFMALFPGSLFGVECACIF 140 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AIFT QVWNMTF Y SL IP D+EE + ++ L+ WQ+F + +P SM L++N MMS Sbjct: 141 AIFTGQVWNMTFGFYNSLVTIPADMEEAASTYGLNRWQRFTTVQLPASMHSLIFNSMMSF 200 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 GGWFFV SE I V + I LPG+GSY+A A++ D A L+A+ ML +I DQL++ Sbjct: 201 GGGWFFVAQSEAISVMNKNIKLPGLGSYMASAVETGDNRAALWAVAAMLLIILASDQLVW 260 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++K+R+E T P SW+ L R+ + + PL + ++ L L Sbjct: 261 RPLLAWADKYRMELTESGSPPRSWLYDLLRRAYVFEWFNHR----LEPLCDWIRHLTFRL 316 Query: 321 GVIRFHFPENFLQLCS-NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 + P++ + + S R ++ + W C + A + + +H + + + Sbjct: 317 TTVEPSRPQSRVPMGSLVVRGLGLVVLAWVGSKCATGLVAA---VVNVRDHVSPAQMGNI 373 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 G T+ RV+V+ +A++IW+PVG+WIG RP ++ QP AQ+ A+FP N+ FP VV Sbjct: 374 AMAGLFTLLRVLVMTTLATLIWVPVGVWIGLRPGVARFAQPLAQMAASFPVNMTFPFVVG 433 Query: 440 CVSYYHLNPNLWLSL-LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 +H+ P W S+ LM GTQWYILFNV+AGA A PND KE A ++ + GW WR +I Sbjct: 434 FYVAWHI-PMGWGSIFLMAMGTQWYILFNVVAGAMAIPNDLKEAARTYGLRGWNLWRTLI 492 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP IFPY+VTGA TA GGAWNASIV+E+A+WG L+ GLGA +AE+T +G P ++ Sbjct: 493 LPAIFPYWVTGACTAAGGAWNASIVAELATWGPTQLKANGLGATLAEATHQGDKPVIICS 552 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + +M FV+ +NR LW LY R RL Sbjct: 553 IAMMSLFVVLMNRVLWRRLYRLAERRFRL 581 >gi|121535326|ref|ZP_01667139.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] gi|121306112|gb|EAX47041.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] Length = 580 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/581 (41%), Positives = 345/581 (59%), Gaps = 34/581 (5%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 SRR + D+L V ++ +L+ +P + + I+ D LP YA R+ LR Sbjct: 10 SRRF--GLIDILVIAFVFALLFSVLYLGAGMVIPFSPENQIEISTDPADLPYYAGRSLLR 67 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M A SLLFTF+Y ++AAKSR VLVP+LDI+QS+P+LGFL+ T+ F+ L+P + Sbjct: 68 MFIAYGASLLFTFIYGSIAAKSRTAEKVLVPLLDILQSVPVLGFLSVTITMFIGLFPNSL 127 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G ELA+IFAIFT Q WNMTFS Y SL +P+DL+E + RL+ WQ+F L VPF+M Sbjct: 128 LGVELASIFAIFTGQCWNMTFSFYHSLTTLPQDLKEAAAVLRLNWWQRFIKLEVPFAMIS 187 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 LVWN MMS G WFF+ ASE I V + I LPG+GS++A A+++ ++ A+ YA+LTM+ + Sbjct: 188 LVWNSMMSFGGAWFFLAASEAITVLNQDIRLPGVGSFMAAAVEKGNMSAVGYAILTMIIM 247 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I L DQL +RP++VWS KF++ERT I + S V + ++ F+ ++ FF P++ Sbjct: 248 IMLVDQLFWRPIVVWSQKFKMERTEAIEVSTSLVYDILKRA---VFVAWAQKYFFGPITQ 304 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ---SIGYIV 368 + ++ C+ I + + + + W + Y V Sbjct: 305 LI---------------DSAFNRCARVSGKVAAQIEHLTPLSYLTVAMKWALLLATIYYV 349 Query: 369 NHFTYQDVL-----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 TYQ +L +I LG T+ RV +I + +PVG+WIG P +S Sbjct: 350 GQQTYQGILLIASMGFDKLVKIITLGFYTLGRVTAASLIGVLWTVPVGVWIGTNPRLSKF 409 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 QP Q+ A+FPAN+ +P VV Y +N L LLM+ GTQWYILFNVIAGA A P Sbjct: 410 FQPIVQVTASFPANMIYPFVVVLYLNYGINFELGSILLMMLGTQWYILFNVIAGAMAIPT 469 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 D KE ++ F ++GW+ WR +ILP IFP+ +TG ITA GGAWNASIVSE+ +W L T Sbjct: 470 DLKEASTVFKLSGWQKWRKLILPAIFPHLITGCITASGGAWNASIVSELVTWKDQQLNAT 529 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 GLG +I + TE G + ++ G+++MC FV+ +NR W LY Sbjct: 530 GLGNFIGQVTEAGDWSGILGGIIVMCAFVIIINRLFWRRLY 570 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-----SLLMIFGTQ-WYILFNVIAGAS 473 P +L + P F L V+ + L PN L S+ IF Q W + F+ + Sbjct: 98 PLLDILQSVPVLGF--LSVTITMFIGLFPNSLLGVELASIFAIFTGQCWNMTFSFYHSLT 155 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 P D KE A+ + W+ + + +P V ++ + GGAW SE + + Sbjct: 156 TLPQDLKEAAAVLRLNWWQRFIKLEVPFAMISLVWNSMMSFGGAWFFLAASEAITVLNQD 215 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 +R G+G+++A + EKG+ V +L M ++ +++ W P+ ++ + Sbjct: 216 IRLPGVGSFMAAAVEKGNMSAVGYAILTMIIMIMLVDQLFWRPIVVWSQK 265 >gi|308235357|ref|ZP_07666094.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC 14018] gi|311115105|ref|YP_003986326.1| ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019] gi|310946599|gb|ADP39303.1| ABC superfamily ATP binding cassette transporter, membrane protein [Gardnerella vaginalis ATCC 14019] Length = 582 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 233/570 (40%), Positives = 349/570 (61%), Gaps = 13/570 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R + +I + + + G+ LL I + P+ I V + D+ +LP Y R+ RM+ Sbjct: 21 RFWSDIIVCVGIIALFGVSAFLLQRINQPIGPKGIPSAV--STDLINLPYYTLRSVFRMM 78 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A++ SL+FT +Y +LAA+SRRLG VL+P+LDI+QS+PILGFL+ TV ++ ++PG ++G Sbjct: 79 LALIASLIFTIIYGSLAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSMMG 138 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNMTFS ++SL + P++L+E RS +L+ WQ+FW L +P +M L+ Sbjct: 139 VEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLL 198 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPG+GS++A + E L I +A+L+M+ V+ Sbjct: 199 WNCMMSVGGGWFFLTASEMISVNNHTYALPGVGSFVAQSAAENKLGNIWWAILSMIVVVL 258 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 D L++P+ W+ +FR+ ++ S VL L R ++ I FSP+ + Sbjct: 259 AIDFFLWKPLTAWAERFRITQSASDEERKSAVLTLIRHSHADEVIS----KLFSPIREWL 314 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + + R G +P ++QR + D+ + V+ + +G+A Q + ++ Sbjct: 315 EIITRPFGRTGSQWPRK-----ASQR--KLGDLVFNIVMAVLILGLAAQMLYFVATRTGL 367 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 Q+ LG +T RV VLI ++S+IW+PVG++IG P IS +QP Q+LA+FPAN Sbjct: 368 QEFATAGALGALTFARVAVLIFVSSLIWVPVGVYIGMNPKISRIMQPVVQILASFPANFV 427 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP + +H++ +LM GTQWYILFNVIAGASA P+D +E+A SF + Sbjct: 428 FPFAMMWFMAWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMARSFRLNRMLK 487 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 W+ ++LP IF + TG ITA GGAWNASIVSE+ +G H+ T GLGAYI +T G Sbjct: 488 WKTLVLPAIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMATQGLGAYITNATTVGDSV 547 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + ++GV +M V+ NR W PL Y + Sbjct: 548 KTLVGVTVMSLIVVLSNRLFWTPLQRYSAK 577 >gi|302527762|ref|ZP_07280104.1| binding-protein-dependent transport system inner membrane component [Streptomyces sp. AA4] gi|302436657|gb|EFL08473.1| binding-protein-dependent transport system inner membrane component [Streptomyces sp. AA4] Length = 577 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/534 (43%), Positives = 328/534 (61%), Gaps = 11/534 (2%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 ++ D LP YA R+ LRM A+V+S+ FTF YAT AA+ RR +L+P LDI+QS+P+L Sbjct: 54 VSTDPAELPYYAGRSLLRMFVALVLSVGFTFCYATAAARLRRTEKILLPALDILQSVPVL 113 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GFL+ T+ F+ L+PG +G E A+IFAIFTSQ WNMTF+ + SL + PRDL+E SR R Sbjct: 114 GFLSVTITGFIALFPGSQLGLECASIFAIFTSQAWNMTFAFHHSLVSQPRDLDEASRLLR 173 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 LS WQ+FW + VP M LVWN MMS GGWFF+ ASE + V + LPGIG+Y+A A Sbjct: 174 LSRWQRFWRVDVPSGMIPLVWNGMMSFGGGWFFLTASEALSVNNQKFALPGIGAYVATAS 233 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 +E DL +L A+ M+ ++ + L +RP+ WS +FR+E + S VL L R++ Sbjct: 234 EEGDLGKVLLAVGVMVVLVVGVNVLFWRPLTAWSERFRIENSEAAEAPRSLVLDLLRRSR 293 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 +G PL R L V F E L+ +R + DI + VV Sbjct: 294 IPTLLGRVLGKLVFPLD-------RALAV--FGLAEYPLRFSPARRRAA--DIVFSVVVF 342 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 G+ + + + +I Y ++ +V+ LG IT RVV L+++ +++W+PVG+WIG P Sbjct: 343 GLILYGTVRMVLFIGETTGYGEIGHVLLLGLITFARVVALVVVGTLVWVPVGVWIGMNPR 402 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 +S QP Q+LA+FPAN FPL+ + + ++ + LLM G QWYILFNVIAGAS Sbjct: 403 VSRLAQPVVQVLASFPANFLFPLITAVLLATGISLDWGGILLMSLGAQWYILFNVIAGAS 462 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 A P+D +E +++ + WWR ++LP +FP YVTG ITA GGAWNASIV+E+ S+ + Sbjct: 463 AIPHDLREASANLRLPRALWWRRLVLPAVFPSYVTGGITAAGGAWNASIVAEIVSYHGVT 522 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L TGLGAYIA++T G ++LGV +M +V+ LNR W LY R L Sbjct: 523 LTATGLGAYIADATSTGDSGRILLGVAVMSLYVVGLNRLFWRRLYRLAERRFSL 576 >gi|320457401|dbj|BAJ68022.1| ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 596 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 238/570 (41%), Positives = 347/570 (60%), Gaps = 11/570 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ ++ + + G+I +L I E P+ + ++ ++ LP YA R+ RML Sbjct: 33 RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPS--QVSTNLADLPYYALRSVFRML 90 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTF+Y T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 91 VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + P +L+E +RS +L+ WQ+FW L VP +M L+ Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++TM+ V+ Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + + F P+ + Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAW----LFRPVGDLF 326 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG + + + R + +F V+ A G+ Q + I + Sbjct: 327 DTLTRPLGRTGGRWAAD----VKSARSRALDVVFTVLVLAACAFGLV-QLMLVIHRDAGF 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ LG +T RV +L ++ S IW+P+G IG P +S +QP Q+LA+FP+N Sbjct: 382 GELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ N LLM GTQWYILFNVIAGAS P+D +E+ SF + W+ Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G+ Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++GV +M FV+A+NR W+PL R Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAER 591 >gi|213691332|ref|YP_002321918.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522793|gb|ACJ51540.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 594 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 238/570 (41%), Positives = 347/570 (60%), Gaps = 11/570 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ ++ + + G+I +L I E P+ + ++ ++ LP YA R+ RML Sbjct: 31 RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPS--QVSTNLADLPYYALRSVFRML 88 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTF+Y T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 89 VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 148 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + P +L+E +RS +L+ WQ+FW L VP +M L+ Sbjct: 149 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++TM+ V+ Sbjct: 209 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 268 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + + F P+ + Sbjct: 269 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAW----LFRPVGDLF 324 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG + + + R + +F V+ A G+ Q + I + Sbjct: 325 DTLTRPLGRTGGRWAAD----VKSARSRALDVVFTVLVLAACAFGLV-QLMLVIHRDAGF 379 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ LG +T RV +L ++ S IW+P+G IG P +S +QP Q+LA+FP+N Sbjct: 380 GELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 439 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ N LLM GTQWYILFNVIAGAS P+D +E+ SF + W+ Sbjct: 440 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 499 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G+ Sbjct: 500 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 559 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++GV +M FV+A+NR W+PL R Sbjct: 560 RTIIGVTVMSVFVVAVNRLFWNPLQRMAER 589 >gi|167626908|ref|YP_001677408.1| anion ABC transporter permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596909|gb|ABZ86907.1| ABC-type anion transport system, duplicated permease component [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 601 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/561 (42%), Positives = 331/561 (59%), Gaps = 18/561 (3%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + T + ++LD+ LP Y + T +RM + ISLL TF + LAAKS+R Sbjct: 40 LGGSIDYTSQSSVQQYSEVSLDLWLLPYYTAETVMRMFIGLGISLLITFTFGALAAKSKR 99 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P +DI+QSIPILGF TV F+ L+P + GA+ A IF I T+Q WNM S Y Sbjct: 100 AESIIIPAVDILQSIPILGFFAITVTGFLVLFPSSLWGAQSAVIFGIITAQAWNMILSFY 159 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQ+FW + VPFSMPGLVWN MMSMS WF +VASE I+V Sbjct: 160 QSLKTVPKELVEAADMYQLSAWQRFWKVEVPFSMPGLVWNTMMSMSACWFMIVASETIIV 219 Query: 216 GDTV-----IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 + I LPGIGS+I A QD A+ A++ ML I LYDQLLFRP++VWS KF Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQDFRAVGAAIMMMLVTIILYDQLLFRPLVVWSEKF 279 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 L + SW L + +K+ + + S L N ++ + L + ++ P + Sbjct: 280 VLGENQSEVYSKSWFLKILQKSAITKLFSSIFGSISSALVN-IRFFKKNLNKV-YNQPRH 337 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITM 387 Q ++ + + I W + +G+ A+Q++ + + V G +T Sbjct: 338 RKQ---EKQETLLQKILWTVFTLMIVVGLFYFAYQAVYGGNSDIGLSETFKVFGYGLLTG 394 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 FRVVVLI I SIIW+P+G+W+G RP I+ K+QP+AQ+ AAFP NV + + + V LN Sbjct: 395 FRVVVLIFITSIIWVPIGVWVGMRPRIAQKVQPYAQMAAAFPVNVLYGIFGTLVITLGLN 454 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 N+W LLM GTQWYILFNVIAGASA P++ K A + + G+ WR + P + PYYV Sbjct: 455 FNIWCILLMALGTQWYILFNVIAGASAIPDELKLAAKNMQLKGFMKWRKYLFPAVMPYYV 514 Query: 508 TGAITACGGAWNASIVSEVASWG---HIHLRTTGLGAYIAEST--EKGSFPEVVLGVLIM 562 TGAITA GGAWNASIV E +WG ++ +GLG YI T + V+LGV++M Sbjct: 515 TGAITAAGGAWNASIVCEYINWGTGDQSIIQASGLGDYITYYTNLQGDHTANVLLGVIVM 574 Query: 563 CCFVLALNRFLWHPLYLYGTR 583 C V+A N+ W LY Y Sbjct: 575 CVLVVASNKLFWRRLYNYAEN 595 >gi|317482033|ref|ZP_07941058.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] gi|291517374|emb|CBK70990.1| ABC-type anion transport system, duplicated permease component [Bifidobacterium longum subsp. longum F8] gi|316916600|gb|EFV37997.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] Length = 596 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 237/570 (41%), Positives = 346/570 (60%), Gaps = 11/570 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ ++ + + G+I +L I E P+ + ++ ++ LP YA R+ RM Sbjct: 33 RLASDVLVAAGILALFGLIAWILPAIGEPIGPKGVPS--QVSTNLADLPYYALRSVFRMF 90 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTF+Y T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 91 VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + P +L+E +RS +L+ WQ+FW L VP +M L+ Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++TM+ V+ Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + + F P+ + Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAW----LFRPVDDLF 326 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG + + + R + +F V+ A G+ Q + I + Sbjct: 327 DTLTRPLGRTGGRWAAD----VKSARSRALDVVFTVLVLAACAFGLV-QLMLVIHRDAGF 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ LG +T RV +L + S+IW+P+G IG P +S +QP Q+LA+FP+N Sbjct: 382 GELGQAFVLGMVTFLRVALLTLACSVIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ N LLM GTQWYILFNVIAGAS P+D +E+ SF + W+ Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G+ Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++GV +M FV+A+NR W+PL R Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAER 591 >gi|299135927|ref|ZP_07029111.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] gi|298602051|gb|EFI58205.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] Length = 590 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 230/539 (42%), Positives = 336/539 (62%), Gaps = 14/539 (2%) Query: 41 ETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 E+ V D++P I+LD +LP YA+R+TLRM A+ S LFTFVY AA+SRR V Sbjct: 55 ESLVKFSPPDVIPTISLDPRNLPNYAARSTLRMFIALGFSTLFTFVYGYAAARSRRAEKV 114 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+P+LDI+QS+P+LGFL+ TV F+ ++ G ++G E A+IFAIFT Q WNM FS YQSL Sbjct: 115 LIPLLDILQSVPVLGFLSVTVTLFIAMFRGSLLGLEAASIFAIFTGQAWNMAFSFYQSLR 174 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +P +++E+ + LS W++F L +P S+ GLVWN MMS GGWFF+ ASE I V + Sbjct: 175 TVPAEMDEMVTLYGLSKWERFTRLELPSSVIGLVWNGMMSFGGGWFFLAASESISVLNRQ 234 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279 LPG+GSY+A AI +DL A+ +A++TM+ ++ L DQ ++P++ +++++LE + G Sbjct: 235 YTLPGLGSYVASAIAARDLHAVAWAVVTMIILVLLIDQFFWKPLVTIADRYKLELSAG-E 293 Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 WV+ L+R + P + +L L ++ H + Sbjct: 294 ERRFWVVDLWRAASLPALFEC----ILGPSLIRLDRLFSNLTRVKPH--------PGHTS 341 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 S D + VV +A+G+ ++ +I++ +V + LG T RV+ L++++++ Sbjct: 342 PSKTADRVFNVVVSLLALGMIVAAVRFILSSVGMAEVGHAALLGLATGARVLALLVLSTL 401 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 IW P+G+ IGF P ++ QP Q+ A+FPAN FP ++ N LLM G Sbjct: 402 IWTPIGVAIGFNPRLARLSQPLVQICASFPANFLFPFATLIFIRLGIHLNWGSMLLMALG 461 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 QWY+LFNVI GA + PND +E+A+S + G+R W+++I P IF +VTGAITA GGAWN Sbjct: 462 AQWYLLFNVIGGAQSVPNDLREMATSIGLRGFRKWKFLIGPSIFGSWVTGAITASGGAWN 521 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 ASIV+E+ SWGH LR GLGAYIA++T G +P +VLGV +M FV+ LNR LW PLY Sbjct: 522 ASIVAEIVSWGHTTLRAAGLGAYIADATSVGDWPRIVLGVSLMSVFVVTLNRILWKPLY 580 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 1/132 (0%) Query: 453 SLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 S+ IF G W + F+ P + E+ + + ++ W + + LP V + Sbjct: 153 SIFAIFTGQAWNMAFSFYQSLRTVPAEMDEMVTLYGLSKWERFTRLELPSSVIGLVWNGM 212 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + GG W SE S + GLG+Y+A + V V+ M VL +++ Sbjct: 213 MSFGGGWFFLAASESISVLNRQYTLPGLGSYVASAIAARDLHAVAWAVVTMIILVLLIDQ 272 Query: 572 FLWHPLYLYGTR 583 F W PL R Sbjct: 273 FFWKPLVTIADR 284 >gi|241667484|ref|ZP_04755062.1| ABC-type anion transport system, duplicated permease component [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876031|ref|ZP_05248741.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842052|gb|EET20466.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 601 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/561 (42%), Positives = 332/561 (59%), Gaps = 18/561 (3%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + T + ++L++ LP Y + T +RM + ISLL TF++ LAAKS+R Sbjct: 40 LGGSIDYTNQASVQQYSEVSLNLWLLPYYTAETVMRMFIGLGISLLITFIFGALAAKSKR 99 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P +DI+QSIPILGF TV F+ L+P + GA+ A IF I T+Q WNM S Y Sbjct: 100 AESIIIPAVDILQSIPILGFFAITVTGFLVLFPSSLWGAQSAVIFGIITAQAWNMILSFY 159 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQ+FW + VPFSMPGLVWN MMSMS WF +VASE I+V Sbjct: 160 QSLKTVPKELVEAADMYQLSAWQRFWKVEVPFSMPGLVWNTMMSMSACWFMIVASETIIV 219 Query: 216 GDTV-----IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 + I LPGIGS+I A QD A+ A++ ML I LYDQLLFRP++VWS KF Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQDFRAVGAAIMMMLVTIILYDQLLFRPLVVWSEKF 279 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 L + SW L + +K+ + + S L N ++ + L + ++ P + Sbjct: 280 VLGENQSEVYSKSWFLKILQKSAITKLFSSIFGSISSALVN-IRFFKKNLNKV-YNQPRH 337 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITM 387 Q ++ + + I W + +G+ A+Q++ + + V G +T Sbjct: 338 RKQ---EKQETLLQKILWTVFTLMIVVGLFYFAYQAVYGGNSDIGLSETFKVFGYGLLTG 394 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 FRVVVLI I SIIW+P+G+W+G RP I+ K+QP+AQ+ AAFP NV + + + V LN Sbjct: 395 FRVVVLIFITSIIWVPIGVWVGMRPRIAQKVQPYAQMAAAFPVNVLYGIFGTLVITLGLN 454 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 N+W LLM GTQWYILFNVIAGASA P++ K A + + G+ WR + P + PYYV Sbjct: 455 FNIWCILLMALGTQWYILFNVIAGASAIPDELKLAAKNMQLKGFMKWRKYLFPAVMPYYV 514 Query: 508 TGAITACGGAWNASIVSEVASWG---HIHLRTTGLGAYIAEST--EKGSFPEVVLGVLIM 562 TGAITA GGAWNASIV E +WG ++ +GLG YI T + V+LGV++M Sbjct: 515 TGAITAAGGAWNASIVCEYINWGTGDQSIIQASGLGDYITYYTNLQGDHTANVLLGVIVM 574 Query: 563 CCFVLALNRFLWHPLYLYGTR 583 C V+A N+ W LY Y Sbjct: 575 CVLVVASNKLFWRRLYNYAEN 595 >gi|296453563|ref|YP_003660706.1| binding-protein-dependent transporter inner membrane component [Bifidobacterium longum subsp. longum JDM301] gi|296182994|gb|ADG99875.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium longum subsp. longum JDM301] Length = 596 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 235/564 (41%), Positives = 345/564 (61%), Gaps = 11/564 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ ++ + + G+I +L I E P+ + ++ ++ LP YA R+ RM Sbjct: 33 RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPS--QVSTNLADLPYYALRSVFRMF 90 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTF+Y T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 91 VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + P +L+E +RS +L+ WQ+FW L VP +M L+ Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++ M+ V+ Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVMMVLVVL 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + + F P+ + Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAW----LFRPVGDLF 326 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG + + + R + +F V+ A G+ Q + I + Sbjct: 327 DTLTRPLGRTGGRWAAD----VKSARSRALDAVFTVLVLAACAFGLV-QLMLVIHRDAGF 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ LG +T RV +L ++ S+IW+P+G IG P +S +QP Q+LA+FP+N Sbjct: 382 GELGQAFVLGMVTFLRVALLTLVCSVIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ N LLM GTQWYILFNVIAGAS P+D +E+ SF + W+ Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G+ Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577 ++GV +M FV+A+NR W+PL Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPL 585 >gi|209522523|ref|ZP_03271110.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209497040|gb|EDZ97308.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 402 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 207/415 (49%), Positives = 280/415 (67%), Gaps = 20/415 (4%) Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +FW L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L Sbjct: 1 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNL 60 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298 AI + +L M VI YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + Sbjct: 61 HAIGWVILAMTVVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLIRRTRLIH-- 118 Query: 299 GYSSWNFFSPLSNNVKKLCR------TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 PL + + R RFH P++ ++ S + DI W +V Sbjct: 119 -----RLLVPLGWMLARAARVRFQLPAFSAPRFHIPQS-------EKSSKLGDIIWAAIV 166 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 + + ++ Y+ + ++ +V LG IT+ RVV+LI IAS+IW+P+G+ IG RP Sbjct: 167 LLATVYVVYRVFLYVRTGVSMDEIGHVFVLGLITLLRVVLLIAIASVIWVPIGVLIGLRP 226 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 ++ K+QP AQ LAAFPAN+ FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA Sbjct: 227 ALAEKVQPLAQFLAAFPANLLFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGA 286 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 S++PND++E A++FHI GW+WWR ++LPGIFPYYVTGAITA GGAWNASIVSE WG Sbjct: 287 SSYPNDYREAATNFHIRGWQWWRQVMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDT 346 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + GLGAYIA++T G FP++++G+ +M FV NR LW P+Y Y LRL Sbjct: 347 KVAAHGLGAYIAQTTAAGDFPKIIVGIAVMSLFVTLFNRLLWRPMYAYAEGKLRL 401 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ + P D E + +F + GWQ + + +P P V + + G W Sbjct: 276 WYILFNVIAGASSYPNDYREAATNFHIRGWQWWRQVMLPGIFPYYVTGAITASGGAWNAS 335 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE + GDT + G+G+YIA D I+ + M + L+++LL+RPM ++ Sbjct: 336 IVSEFVQWGDTKVAAHGLGAYIAQTTAAGDFPKIIVGIAVMSLFVTLFNRLLWRPMYAYA 395 Query: 268 N-KFRLE 273 K RL+ Sbjct: 396 EGKLRLD 402 >gi|297242881|ref|ZP_06926819.1| ABC-type anion transporter, duplicated permease component [Gardnerella vaginalis AMD] gi|296889092|gb|EFH27826.1| ABC-type anion transporter, duplicated permease component [Gardnerella vaginalis AMD] Length = 582 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 229/564 (40%), Positives = 340/564 (60%), Gaps = 13/564 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R + +I + + V G+ L+ I + P I ++ D+ +LP Y R+ RML Sbjct: 21 RFWSDIIVCVGIIAVFGVTAFLIQRINQPIGPSGIPS--KVSTDLINLPYYTLRSVFRML 78 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+V SL+FT VY ++AA+SRRLG VL+P+LDI+QS+PILGFL+ TV ++ ++PG ++G Sbjct: 79 IALVASLIFTIVYGSIAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSMLG 138 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNMTFS ++SL + P++L+E RS +L+ WQ+FW L +P +M L+ Sbjct: 139 VEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLL 198 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E L I +A+++M+ V+ Sbjct: 199 WNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIVVL 258 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 D L++P+ W+ +FR+ ++ S +L L R ++ I F P+ + Sbjct: 259 ALDFFLWKPLTAWAERFRITQSASDNERHSAILTLIRHSHADEVIS----KLFLPIREWL 314 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +K+ R G +P Q ++ ++ ++ +V A + + ++ Sbjct: 315 EKVTRPFGRTGSKWPHKAAQ---HKLGDWVFNVIMLIIVAAGAAHMLY----FVYTTAGL 367 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + LG IT RV VLI+I+S+IW+PVG+ IG P IS +QP Q+LA+FPAN Sbjct: 368 HEFITAGMLGGITFIRVAVLILISSLIWVPVGVVIGMNPKISRIMQPIVQILASFPANFI 427 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP ++ +H++ +LM GTQWYILFNVIAGASA P+D +E+ SF + Sbjct: 428 FPFAMAWFMAWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMTRSFRLDRTLR 487 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 W+ +ILP IF + TG ITA GGAWNASIVSE+ +G H+ T GLGAYI +T G Sbjct: 488 WKTLILPSIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMETQGLGAYITNATTLGDSA 547 Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577 ++GV +M V+ NR W P+ Sbjct: 548 RTLVGVTVMSLIVVLSNRLFWSPM 571 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 1/132 (0%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 S+ IF +Q W + F+ + P + E S +T W+ + + +P + + Sbjct: 143 SIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLLWNCM 202 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + GG W SE+ S + G+G+++A++ + + ++ M VLAL+ Sbjct: 203 MSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIVVLALDF 262 Query: 572 FLWHPLYLYGTR 583 FLW PL + R Sbjct: 263 FLWKPLTAWAER 274 >gi|283782843|ref|YP_003373597.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] gi|298253320|ref|ZP_06977112.1| ABC-type anion transporter, duplicated permease component [Gardnerella vaginalis 5-1] gi|283442170|gb|ADB14636.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] gi|297532715|gb|EFH71601.1| ABC-type anion transporter, duplicated permease component [Gardnerella vaginalis 5-1] Length = 582 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 229/564 (40%), Positives = 339/564 (60%), Gaps = 13/564 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R + +I + + V G+ L+ I + P I ++ D+ +LP Y R+ RML Sbjct: 21 RFWSDIIVCVGIIAVFGVTAFLIQRINQPIGPSGIPS--KVSTDLINLPYYTLRSVFRML 78 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+V SL+FT VY +LAA+SRRLG VL+P+LDI+QS+PILGFL+ TV ++ ++PG ++G Sbjct: 79 IALVASLIFTIVYGSLAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSMLG 138 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNMTFS ++SL + P++L+E RS +L+ WQ+FW L +P +M L+ Sbjct: 139 VEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLL 198 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E L I +A+++M+ V+ Sbjct: 199 WNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIVVL 258 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 D L++P+ W+ +FR+ ++ S +L L R ++ I F P+ + Sbjct: 259 ALDFFLWKPLTAWAERFRITQSASDNERHSAILTLIRHSHADEVIS----KLFLPIREWL 314 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +K+ R G +P Q ++ ++ ++ +V A + + ++ Sbjct: 315 EKVTRPFGRTGSKWPHKAAQ---HKLGDWVFNVIMLIIVAAGAAHMLY----FVYTTAGL 367 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + LG IT RV LI+I+S+IW+PVG+ IG P IS +QP Q+LA+FPAN Sbjct: 368 HEFITAGMLGGITFMRVAALILISSLIWVPVGVVIGMNPKISRIMQPIVQILASFPANFI 427 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP ++ +H++ +LM GTQWYILFNVIAGASA P+D +E+ SF + Sbjct: 428 FPFAMAWFMSWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMTRSFRLDRTLR 487 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 W+ +ILP IF + TG ITA GGAWNASIVSE+ +G H+ T GLGAYI +T G Sbjct: 488 WKTLILPSIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMETQGLGAYITNATTLGDSA 547 Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577 ++GV +M V+ NR W P+ Sbjct: 548 RTLVGVTVMSLIVVLSNRLFWSPM 571 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 1/132 (0%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 S+ IF +Q W + F+ + P + E S +T W+ + + +P + + Sbjct: 143 SIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIPLLWNCM 202 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + GG W SE+ S + G+G+++A++ + + ++ M VLAL+ Sbjct: 203 MSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIVVLALDF 262 Query: 572 FLWHPLYLYGTR 583 FLW PL + R Sbjct: 263 FLWKPLTAWAER 274 >gi|208779974|ref|ZP_03247317.1| ABC transporter, membrane protein [Francisella novicida FTG] gi|208743978|gb|EDZ90279.1| ABC transporter, membrane protein [Francisella novicida FTG] Length = 591 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/549 (42%), Positives = 326/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L++ LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 50 ISLNLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 109 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 110 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 169 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 170 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 229 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 230 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 289 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + SN ++ F + L NQ+V D Sbjct: 290 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 336 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 337 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 396 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 397 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 456 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 457 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 516 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 517 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 576 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 577 RRLYNYAEN 585 >gi|254372120|ref|ZP_04987613.1| hypothetical protein FTCG_01262 [Francisella tularensis subsp. novicida GA99-3549] gi|151569851|gb|EDN35505.1| hypothetical protein FTCG_01262 [Francisella novicida GA99-3549] Length = 599 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 58 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + SN ++ F + L NQ+V D Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 344 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 585 RRLYNYAEN 593 >gi|56707421|ref|YP_169317.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669892|ref|YP_666449.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|224456498|ref|ZP_03664971.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370883|ref|ZP_04986888.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254874257|ref|ZP_05246967.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|56603913|emb|CAG44898.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320225|emb|CAL08281.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151569126|gb|EDN34780.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254840256|gb|EET18692.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|282158563|gb|ADA77954.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis NE061598] Length = 599 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 58 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + SN ++ F + L NQ+V D Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKHE 344 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 585 RRLYNYAEN 593 >gi|89255582|ref|YP_512943.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314089|ref|YP_762812.1| ABC transporter ATP-binding protein [Francisella tularensis subsp. holarctica OSU18] gi|169656490|ref|YP_001427591.2| ABC transporter membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254366983|ref|ZP_04983019.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|254368580|ref|ZP_04984596.1| hypothetical protein FTAG_01566 [Francisella tularensis subsp. holarctica FSC022] gi|290954416|ref|ZP_06559037.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|295312158|ref|ZP_06802964.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|89143413|emb|CAJ78586.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115128988|gb|ABI82175.1| ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134252809|gb|EBA51903.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|157121483|gb|EDO65674.1| hypothetical protein FTAG_01566 [Francisella tularensis subsp. holarctica FSC022] gi|164551558|gb|ABU60635.2| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 599 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 58 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + SN ++ F + L NQ+V D Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKHE 344 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 585 RRLYNYAEN 593 >gi|167010348|ref|ZP_02275279.1| ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica FSC200] Length = 591 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 50 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 109 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 110 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 169 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 170 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 229 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 230 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 289 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + SN ++ F + L NQ+V D Sbjct: 290 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKHE 336 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 337 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 396 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 397 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 456 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 457 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 516 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 517 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 576 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 577 RRLYNYAEN 585 >gi|194324063|ref|ZP_03057838.1| ABC transporter, membrane protein [Francisella tularensis subsp. novicida FTE] gi|194321960|gb|EDX19443.1| ABC transporter, membrane protein [Francisella tularensis subsp. novicida FTE] Length = 591 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 50 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 109 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 110 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 169 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 170 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 229 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 230 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETYSKSWFLTI 289 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + SN ++ F + L NQ+V D Sbjct: 290 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 336 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 337 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 396 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 397 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 456 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 457 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 516 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 517 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 576 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 577 RRLYNYAEN 585 >gi|118496755|ref|YP_897805.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. novicida U112] gi|118422661|gb|ABK89051.1| ABC-type anion transport system, duplicated permease component [Francisella novicida U112] Length = 599 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 58 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETYSKSWFLTI 297 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + SN ++ F + L NQ+V D Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 344 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 585 RRLYNYAEN 593 >gi|134302641|ref|YP_001122610.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134050418|gb|ABO47489.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 599 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/549 (42%), Positives = 325/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 58 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 178 LSSWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + SN ++ F + L NQ+V D Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKHE 344 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 585 RRLYNYAEN 593 >gi|187932197|ref|YP_001892182.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. mediasiatica FSC147] gi|187713106|gb|ACD31403.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. mediasiatica FSC147] Length = 599 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 232/550 (42%), Positives = 322/550 (58%), Gaps = 34/550 (6%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 58 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348 +K ++ F + SN ++ F + L NQ+V D Sbjct: 298 LQKAYVVKIFT----TFLAKCSNK---------IVNIKFFKKNLDKAYNQKVHRKADKH- 343 Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQ------------DVLYVIWLGCITMFRVVVLIII 396 V + + + + +F YQ + V G T RV VLI+I Sbjct: 344 ESVTKRILWNVIIILMILALLYFVYQIVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILI 403 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 404 TSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLM 463 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG Sbjct: 464 ALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGG 523 Query: 517 AWNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFL 573 +WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ Sbjct: 524 SWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLF 583 Query: 574 WHPLYLYGTR 583 W LY Y Sbjct: 584 WRRLYNYAEN 593 >gi|254375266|ref|ZP_04990746.1| ABC-type anion transport system [Francisella novicida GA99-3548] gi|151572984|gb|EDN38638.1| ABC-type anion transport system [Francisella novicida GA99-3548] Length = 599 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/549 (41%), Positives = 325/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 58 ISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 117 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 118 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 177 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 178 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 237 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 238 IDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTI 297 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD--- 345 +K ++ F + S+ ++ F + L NQ+V D Sbjct: 298 LQKAYVVKIFT----TFLAKCSSK---------IVNIKFFKKNLDKAYNQKVHKKADKHE 344 Query: 346 -----IFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 I W ++ + + + +Q++ ++ V G T RV VLI+I Sbjct: 345 SVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILIT 404 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM Sbjct: 405 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMA 464 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 465 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 524 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A N+ W Sbjct: 525 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFW 584 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 585 RRLYNYAEN 593 >gi|328675308|gb|AEB27983.1| ABC-type anion transport system, duplicated permease component [Francisella cf. novicida 3523] Length = 591 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/549 (41%), Positives = 327/549 (59%), Gaps = 32/549 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + LP Y + TT+RM + ISLL TF++ T AAK++R +++P++DI+QSIP+L Sbjct: 50 ISLSLWLLPYYTAETTIRMFIGLFISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVL 109 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++ Sbjct: 110 GFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQ 169 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSY 228 LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V + I LPGIGS+ Sbjct: 170 LSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSF 229 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 I A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + Sbjct: 230 IDAANNAQNFTAVGAAIVTMLVTIVLYDQLLFRPLVAWSEKFVIGDNPSETYSKSWFLTI 289 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV-------- 340 +K ++ F++ SNN ++ +F + L NQ+V Sbjct: 290 LQKAYVVKIFT----RFWTKCSNN---------IVNINFFKKNLDKAYNQKVHKKAEKHE 336 Query: 341 SYMLDIFWFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 S + I W ++ + + + +Q++ ++ V G T RV LI+I Sbjct: 337 STIKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAALILIT 396 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN ++W LLM Sbjct: 397 SLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFDIWCILLMA 456 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGAITA GG+ Sbjct: 457 LGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGS 516 Query: 518 WNASIVSEVASWGHIH-LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLW 574 WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+A NR W Sbjct: 517 WNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNRLFW 576 Query: 575 HPLYLYGTR 583 LY Y Sbjct: 577 RRLYNYAEN 585 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/226 (20%), Positives = 94/226 (41%), Gaps = 17/226 (7%) Query: 373 YQDVLYVIWL----GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 Y D+ +WL T R+ + + I+ +I G W S I P +L + Sbjct: 47 YSDISLSLWLLPYYTAETTIRMFIGLFISLLITFIFGTWAAKNKRAESIIIPLVDILQSI 106 Query: 429 PANVFFPLVVSCVSYYHLNP-NLW-LSLLMIFG----TQWYILFNVIAGASAFPNDFKEV 482 P FF + V+ + + P +LW +IFG W ++ + P + +E Sbjct: 107 PVLGFFAITVT--GFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREA 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV-----ASWGHIHLRTT 537 A + ++ W+ + + +P P V + + G+W + SE ++ I + Sbjct: 165 ADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLP 224 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G+G++I + +F V ++ M ++ ++ L+ PL + + Sbjct: 225 GIGSFIDAANNAQNFTAVGAAIVTMLVTIVLYDQLLFRPLVAWSEK 270 >gi|303232762|ref|ZP_07319447.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] gi|302481248|gb|EFL44323.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] Length = 582 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 229/573 (39%), Positives = 345/573 (60%), Gaps = 15/573 (2%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 + R++ +I + + G+ LL + P+ I V + D+ +LP Y R+ R Sbjct: 19 ATRVWSDIVVCVGIFALFGLTAFLLQCTTQPIGPQGIPSTV--STDIVNLPYYTLRSVFR 76 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M A++ SL+FT +Y +LAA S LG +L+P+LDI+QS+PILGFL+ TV ++ L+P + Sbjct: 77 MFVALIASLVFTILYGSLAAHSSTLGKILIPLLDILQSVPILGFLSATVSIWLVLFPESM 136 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G E A++FAIFTSQ WNMTFS Y SL + P++LEE +RS RL+ WQ+FW L +P + Sbjct: 137 LGVEAASMFAIFTSQAWNMTFSFYHSLQSEPKELEEAARSLRLTHWQRFWVLSMPNATIA 196 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 L+WN MMS+ GGWFF+ ASEMI V + LPGIGS++A + EQ L I +A+L M+ V Sbjct: 197 LLWNCMMSVGGGWFFLTASEMISVNNNTYALPGIGSFVAQSAAEQKLDNIWWAILAMVIV 256 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 + D L+++P + W+ KFR+ ++ + S +L L R ++ + +PL Sbjct: 257 VIAIDFLVWKPFLAWAEKFRITQSASVDERHSAILTLIRHSHADEVLR----ALMAPLRA 312 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV-AIGIAWQSIGYIVNH 370 + +L R G+ L RV M+ I CV+ GV A+ + + + V Sbjct: 313 WLDRLTRIFGITGASSKPAAAHL----RVIDMIIIAAACVLIGVFAVNLLY-VVATSVGL 367 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 F + Y LG +T RV +L++++S+IW+P+G+ IG P IS QP Q+ A+FPA Sbjct: 368 FEFA---YAGMLGALTFVRVALLVVVSSLIWVPIGVCIGMNPKISRIAQPIVQICASFPA 424 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N FP ++ +H++ ++ +LM GTQWYILFNVIAGASA P+D +++A+SF + Sbjct: 425 NFIFPFAMTWFMAWHIDLSIGSIILMALGTQWYILFNVIAGASAIPDDLRQMATSFQLPL 484 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W+ +ILP IF + TGA+TA GGAWNASIV+E+ +G H+ T GLGAYI +T G Sbjct: 485 IMRWKTLILPAIFGAWCTGALTAAGGAWNASIVAEIVEFGAFHMETQGLGAYITAATTVG 544 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + ++GV +M V+ NR +W PL + Sbjct: 545 DGAKTLVGVTVMSLIVVVSNRLIWTPLQRLAEK 577 >gi|209521906|ref|ZP_03270577.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209497664|gb|EDZ97848.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 402 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 203/409 (49%), Positives = 278/409 (67%), Gaps = 8/409 (1%) Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +FW L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L Sbjct: 1 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNL 60 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298 A+ + +LTM VI YDQ LFRP++ W++KFR+E T+ SW+L + R+T + Sbjct: 61 HAVGWVILTMTVVILAYDQFLFRPLVAWADKFRMETTSSGNAPQSWLLDMMRRTRLIH-- 118 Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358 +P + R I F + +++ + + DI W +V + + Sbjct: 119 -----ELLTPAGVMLATAARIPLRIPFANGRRAGR-ARSEKSTRVGDIVWGILVFMLTVY 172 Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 + ++ + Y+ T +V +V LG IT+ RVV+LI I+S+IW+P+G+ IG RP ++ K+ Sbjct: 173 VIYRVVSYVRTGVTLDEVGHVFVLGLITLLRVVLLIAISSVIWVPIGVLIGLRPALAEKV 232 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 QP AQ LAAFPAN+ FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+A+PND Sbjct: 233 QPLAQFLAAFPANLLFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATAYPND 292 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 ++EVA++F I GW+WWR ++LPG+FPYYVTGAITA GGAWNASIVSE WG + G Sbjct: 293 YREVATNFRIRGWQWWRQVMLPGVFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHG 352 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGA+IAE+T G FP+++LGV +M FV NR LW PLY + LRL Sbjct: 353 LGAFIAETTAAGDFPKIILGVAVMSLFVTLFNRTLWRPLYAFAEARLRL 401 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ P D EV+ +FR+ GWQ + + +P P V + + G W Sbjct: 276 WYILFNVIAGATAYPNDYREVATNFRIRGWQWWRQVMLPGVFPYYVTGAITASGGAWNAS 335 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE + GDT + G+G++IA D I+ + M + L+++ L+RP+ ++ Sbjct: 336 IVSEFVQWGDTKVAAHGLGAFIAETTAAGDFPKIILGVAVMSLFVTLFNRTLWRPLYAFA 395 Query: 268 N-KFRLE 273 + RL+ Sbjct: 396 EARLRLD 402 >gi|148240768|ref|YP_001226155.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synechococcus sp. WH 7803] gi|147849307|emb|CAK24858.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synechococcus sp. WH 7803] Length = 586 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 221/537 (41%), Positives = 326/537 (60%), Gaps = 21/537 (3%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 +D+ PI LP YA+R++LRM + ISL V TLAA++ V++P++DI+Q Sbjct: 65 IDLNPI-----HLPAYAARSSLRMFIGLGISLGICLVVGTLAARNAIAERVILPLVDILQ 119 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 S+P+LGFL TV +F+NL+ G ++G E A+IFAI T Q+WN+ FS YQSL +P DL E Sbjct: 120 SVPVLGFLAITVAFFINLFRGSLLGLEAASIFAIVTGQLWNLIFSYYQSLRTVPSDLSEA 179 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 + +R SGWQ+F L +P LVWN MMS +GGWFF SE I V + LPG+GSY Sbjct: 180 ATLYRFSGWQRFTQLDLPAGSINLVWNGMMSFAGGWFFATQSEAISVNNADYTLPGLGSY 239 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 +A AI Q L IL+A++TM+ V+ + DQL +RP++ WS +FRL+ PA SW L L Sbjct: 240 VAAAIAAQRLDCILWALITMVLVVVISDQLFWRPLVAWSERFRLDSGAAGEPARSWFLDL 299 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348 ++ LR++ + PL+ +++L + PE SN R S + + Sbjct: 300 LNRSGGLRWLKAAGAITLQPLTRTLRRLTQA--------PEQ----PSNTRESGAVPAWL 347 Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 ++ +A + I++ + L V+ G +T+ RV+ ++ ++S++++P+ + I Sbjct: 348 DPLLLLLAGAAVVWGLDVILHEVGPAETLEVLGFGLLTLGRVLAVVALSSLVFLPLAVMI 407 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS--LLMIFGTQWYILF 466 G RP +S+ +QP +LA+ PAN+ FP + L +W+ +LM G+QWY+LF Sbjct: 408 GLRPRLSTLLQPLILMLASIPANLLFPFFTLLFLFSGL--PMWIGSVILMALGSQWYVLF 465 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N AGASA PND +E+ F + G + W +LP +F +VTGAITA G AWNASIV+EV Sbjct: 466 NTTAGASAIPNDLREMEQVFGLRGKQRWSRYLLPAVFSSWVTGAITASGAAWNASIVAEV 525 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 +WG L+TTGLGAYIAE+T G P ++LG+++M FV+ NR LW PLY R Sbjct: 526 VTWGSTTLQTTGLGAYIAEATRSGDGPRILLGLMVMSLFVVGFNRLLWRPLYRIAER 582 >gi|328676212|gb|AEB27082.1| ABC transporter, permease protein [Francisella cf. novicida Fx1] Length = 524 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/532 (42%), Positives = 311/532 (58%), Gaps = 34/532 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M +VISLL TF++ T AAK++R +++P++DI+QSIP+LGF TV F+ ++P + Sbjct: 1 MFIGLVISLLITFIFGTWAAKNKRAENIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSL 60 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 GA+ A IF I T+Q WNM S YQSL +P++L E + ++LS WQKFW L VPF+MPG Sbjct: 61 WGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPG 120 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTV-----IPLPGIGSYIALAIKEQDLLAILYAML 246 LVWN MMSMSG WF +VASE I+V + I L GIGS+I A Q+ A+ A++ Sbjct: 121 LVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLSGIGSFIDAANNAQNFTAVGAAIV 180 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 TML I LYDQLLFRP++ WS KF + + SW L + +K ++ F Sbjct: 181 TMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQKAYVVKIFT----TFL 236 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 + SN + + F + L NQ+V D + V + + + Sbjct: 237 AKCSNKI---------VNIKFFKKNLDKAYNQKVHRKADKY-ESVTKRILWNVIIILMIL 286 Query: 367 IVNHFTYQDV------------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 + +F YQ V V G T RVVVLI+I S+IW+P+GIWIG RP I Sbjct: 287 ALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVVVLILITSLIWVPIGIWIGLRPKI 346 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 + K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM GTQWYILFNVIAGASA Sbjct: 347 AQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAGASA 406 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH- 533 P + K A + + G + ++P + PYYVTGAITA GG+WNASI+SE +WG Sbjct: 407 IPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGKDSV 466 Query: 534 LRTTGLGAYIAESTE--KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++ +G+G YI + T V+LGV++MC V+A N+ W LY Y Sbjct: 467 IQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAEN 518 >gi|260892984|ref|YP_003239081.1| binding-protein-dependent transport systems inner membrane component [Ammonifex degensii KC4] gi|260865125|gb|ACX52231.1| binding-protein-dependent transport systems inner membrane component [Ammonifex degensii KC4] Length = 572 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/572 (38%), Positives = 346/572 (60%), Gaps = 19/572 (3%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLH---GIQETTVPRDIVDIVPITLDVHSLPQYAS 66 ++RR + D+ + V+ ++ L+H G+ E +D+ PI LP Y Sbjct: 7 LVARRF--SFIDVAVILTVLALLYTLIHLGAGMAEPLRMGAKIDLNPI-----HLPYYVG 59 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 R+ LRM A++ SL+F VY AA S R +L+P LDI+QS+P+LGFL+ T+ + L Sbjct: 60 RSLLRMFIALIASLIFAIVYGYWAAYSLRAEKILIPFLDILQSVPVLGFLSATITGLVAL 119 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 +P ++GAELA+IFA+FT+Q WN+T+ YQSL IPR+L + + FRL+ W + W L +P Sbjct: 120 FPNSMLGAELASIFAVFTAQAWNITYGFYQSLRTIPRELRDAAAIFRLNWWHRLWQLELP 179 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 FS LV+N MMS +G WFF+ ASE I V + I LPG+GSY+A AI +D+ A++ +++ Sbjct: 180 FSAIPLVYNAMMSFAGSWFFLSASEAITVLNRQIYLPGLGSYLATAIMHKDMKALILSII 239 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 TM I L DQL +RP+ +WS +F+LE+T + W+L + ++++ +R G Sbjct: 240 TMAVTIVLVDQLFWRPVAIWSQRFKLEQTKEQMESH-WLLKMLQRSSLVRAFGS---RVL 295 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 P+ ++ + G + E+ L +R+ ++L +F ++ G ++ + Sbjct: 296 EPMQ---RRFIISGGRLVAGTAESSLG-AGIKRIVHLLGVFLLLLLIGYTAYYGYRGV-L 350 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 ++ + +L + LG + RVV + + ++I +P+G+++G+ + + QPF +A Sbjct: 351 LIAQLGLEGILDLFRLGFYSFLRVVAAVALGTLIMLPLGVYLGWNAERARRWQPFITFVA 410 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 +FPAN+ FP H++ LM+ GTQWYILFNVIAG S+ PND KE A+ Sbjct: 411 SFPANMLFPFFTILFLRLHISQEWGAIPLMMLGTQWYILFNVIAGVSSLPNDLKEAAAVL 470 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + GW+ WRY ILPGIFP+ VTG ITA GGAWNA+IV+EV SWG L+ TGLGAYI + Sbjct: 471 GVKGWKRWRYFILPGIFPFLVTGGITAAGGAWNATIVAEVVSWGDHTLQATGLGAYITNA 530 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 TE G++P ++ G++ M +V+A+NR W LY Sbjct: 531 TEAGNWPAIMGGIITMSLYVVAINRLFWRRLY 562 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 6/203 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + +I + I I G W + + PF +L + P F ++ + Sbjct: 61 SLLRMFIALIASLIFAIVYGYWAAYSLRAEKILIPFLDILQSVPVLGFLSATITGLVALF 120 Query: 446 LNPNLWLSLLMIFG----TQWYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILP 500 N L L IF W I + P + ++ A+ F + W R W+ + Sbjct: 121 PNSMLGAELASIFAVFTAQAWNITYGFYQSLRTIPRELRDAAAIFRLNWWHRLWQLELPF 180 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P V A+ + G+W SE + + + GLG+Y+A + ++L ++ Sbjct: 181 SAIPL-VYNAMMSFAGSWFFLSASEAITVLNRQIYLPGLGSYLATAIMHKDMKALILSII 239 Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583 M ++ +++ W P+ ++ R Sbjct: 240 TMAVTIVLVDQLFWRPVAIWSQR 262 >gi|296141005|ref|YP_003648248.1| binding-protein-dependent transporters inner membrane component [Tsukamurella paurometabola DSM 20162] gi|296029139|gb|ADG79909.1| binding-protein-dependent transport systems inner membrane component [Tsukamurella paurometabola DSM 20162] Length = 588 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 241/576 (41%), Positives = 335/576 (58%), Gaps = 15/576 (2%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-VPITLDVHSLPQYASRTTL 70 RR + D+L +I +++ Q P D+ + D +LP YA+R+ L Sbjct: 20 GRRGAGIVADVLVVAGAAAMIWLVIRVGQGMDTPIDLQHADARVDTDPANLPYYAARSLL 79 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM A+ S++FTF YATLAA+SRR VL+P+LD++QS+PILGFL+ TV F+ L+PG Sbjct: 80 RMFLALGASIVFTFAYATLAARSRRARAVLMPLLDVLQSVPILGFLSITVTLFIALFPGS 139 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +G ELAAIFAIFTSQ WNMTF+ YQSL + PRDL E + LS WQ+FW L VP M Sbjct: 140 TLGLELAAIFAIFTSQAWNMTFAFYQSLISQPRDLGEAAEDIGLSRWQRFWRLDVPSGMI 199 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 LVWN MMS GGWFF+ ASE + V LPGIG+Y+A A + DL + +A+ TM+ Sbjct: 200 PLVWNAMMSFGGGWFFLTASEAVSVAGNEYALPGIGAYVASASADGDLGLVGWAIGTMIV 259 Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310 VI + L + P+ W+ +FRLE + S VL + R+++ G + SP+ Sbjct: 260 VIIGVNFLFWSPLTAWAERFRLEDSATGREPKSVVLTVLRRSH----AGEAFGRLMSPI- 314 Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 V R GV P + + +R + L F VV V G+ W++ I++ Sbjct: 315 --VALTDRFFGVFGRSAPSH--DVTPARRRAGDL-AFGIVVVAVVGYGL-WRAAETILST 368 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 +V +V LG TM RV ++++ A+++W+P+G+ IG P +S +QP Q+ A+FPA Sbjct: 369 SGIAEVGHVFLLGLATMGRVALVMLFATVVWVPIGVIIGLNPKLSRALQPVIQVFASFPA 428 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N FPL+ + + ++ +L +LM GTQWYILFNVIA ASA P D E A + Sbjct: 429 NFLFPLITAVLIAGNIPLDLGGVVLMALGTQWYILFNVIAAASAIPGDLLEAADDMSLPR 488 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK- 549 W WRY++LPG+F YVTG ITA GGAWNASIV+EV S+ GLG YIA++T Sbjct: 489 WMRWRYVLLPGVFAGYVTGGITAAGGAWNASIVAEVVSYDGQTYHAFGLGDYIADATAAT 548 Query: 550 --GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++LG+ +MC FV+ N LW LY R Sbjct: 549 GPAHTSNLLLGISVMCLFVVGTNALLWRRLYRVAER 584 >gi|295696444|ref|YP_003589682.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] gi|295412046|gb|ADG06538.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] Length = 569 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/538 (42%), Positives = 331/538 (61%), Gaps = 26/538 (4%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G+ E P+ + ++LD +LP YA R+ +RM A+ S++FT +YA LA++SR Sbjct: 35 KGMVEPYAPQSMT----VSLDPSALPYYAGRSLMRMFVALGASVVFTVLYARLASRSRLG 90 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 +L+P+LDI+QS+P+LGFL+ TVV FM L+PG ++G ELA+IFAIFT QVWNMTF YQ Sbjct: 91 ERILIPLLDILQSVPVLGFLSVTVVGFMALFPGSLLGPELASIFAIFTGQVWNMTFGFYQ 150 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 S+ +P++L E SR + L G ++F+ L + + LVWN MMS GGWFF+ SE I V Sbjct: 151 SITGVPKELREASRLYGLGGVRRFFVLDLAYGAVPLVWNSMMSFGGGWFFLAVSESITVM 210 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 I LPGIGSY+A A+ D+ A+LYAM+TM+ VI + DQL +RP++ W+ +F++E+T Sbjct: 211 HRDIRLPGIGSYMAAAMDAGDVRALLYAMVTMVIVIIVVDQLFWRPLVAWAQRFKVEQTA 270 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP--LSNNVKKLCRTLGVIRFHFPENFLQL 334 G SW+L L R+++ ++ FF P L + R R P ++ Sbjct: 271 GPDLPTSWMLTLLRRSHIAE---WARRVFFEPAWLWMIAGRPPRA---PRMRMPSVAKKV 324 Query: 335 CSNQ--RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 S +++ ++W ++ G G ++ ++++ + + G +T+ RV Sbjct: 325 VSAVIWAAVFVVAVYW--IIRG----------GLMLRELGWRELFFPVLYGVLTLLRVAA 372 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 +++ ++ IPVG+WIG P S QP + A+FPAN+FFPL+ + H++ Sbjct: 373 AVLLGALWTIPVGVWIGTHPKWSRVAQPVVLVAASFPANMFFPLITAAFLSLHVSLEWGS 432 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 LM+ GTQWYILFNVIAGASA P D +E + + GWR WR +ILP IFP VTG +T Sbjct: 433 VALMMLGTQWYILFNVIAGASAIPGDLREASDLMRLGGWRRWRLLILPVIFPSLVTGLVT 492 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A GGAWNASIV+EV SW L TGLGAYI +T G +P +V G+++M FV+A+N Sbjct: 493 AAGGAWNASIVAEVVSWKGTQLAATGLGAYITRATTNGDWPAIVWGIVVMAAFVVAVN 550 >gi|317016935|gb|ADU86008.1| putative binding-protein-dependent transport systems inner membrane component [Dactylosporangium aurantiacum subsp. hamdenensis] Length = 584 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 215/525 (40%), Positives = 311/525 (59%), Gaps = 11/525 (2%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I + LP YA R+ LRM A+ +S +FTF YA AA+SRRL +L+P LDI+QS+P+L Sbjct: 61 IDTNPARLPYYAGRSLLRMFVALGVSTVFTFGYAYAAARSRRLEKILIPALDILQSVPVL 120 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FLT + + L+P IG ELA+IFAIFTSQ WNMTFS Y SL +PRDL+E+SRS R Sbjct: 121 AFLTVAIGALLALFPHSFIGLELASIFAIFTSQAWNMTFSFYHSLITLPRDLDELSRSLR 180 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ W +FW + VP GL+WN MMS GGWFF+VASE + V + LPG+G+Y AI Sbjct: 181 LTRWMRFWKIEVPNGAIGLIWNGMMSFGGGWFFLVASEAVTVANAQYTLPGVGAYAGAAI 240 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 + +L + A+ M ++ + +RPM W+ KF+ E++ S VL R+++ Sbjct: 241 AQGNLGHVFLAIAAMAVMVIGVNFFFWRPMTAWAEKFKQEQSEATEVQRSVVLDFLRRSH 300 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 + + + +P + G + F + L + +R++ + +F + Sbjct: 301 WPQAL--------APARRKLAGWSARAGRV-FGTDDRPLPVSHARRLAGDV-VFAAATIA 350 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 + G+ + + Y+ V + LG +T RV+VL+++ +++W+P+G+ IG P Sbjct: 351 LIGWGL-YSLLRYLHGTAGLGVVAEPLLLGLLTPGRVIVLVVLTTLVWVPIGVRIGSSPR 409 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++ QP Q+LA+FPAN FPL L+ ++ LLM G QWYILFN IAGA Sbjct: 410 LARIAQPIVQILASFPANFLFPLATWLFVRTGLSIDIGGILLMGLGAQWYILFNTIAGAM 469 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 A P D +E + + GWR WR +I+P IFPYYVTG ITA GGAWNASIV+EV + Sbjct: 470 AIPTDLREAMDNLGVHGWRRWRRLIIPAIFPYYVTGGITASGGAWNASIVAEVVGFAGTT 529 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 L GLGAYIA+ST G++P ++ G+ +M +V+ LNR W LY Sbjct: 530 LTAHGLGAYIADSTATGNYPHLIAGIAVMSLYVVGLNRLFWRRLY 574 >gi|325525200|gb|EGD03069.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 421 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 203/435 (46%), Positives = 271/435 (62%), Gaps = 18/435 (4%) Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 Q+L +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I V Sbjct: 1 QALRTVPLDLDEASRSFRLSAWQRFWRLDVPFAMPGLVWNAMMSMSGGWFFVVASEAIAV 60 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275 G+ + LPG+G+Y+A AI +DL A+ +A++ M I LYDQLLF P++ WS +FR Sbjct: 61 GNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVLYDQLLFGPLVAWSERFRYGDA 120 Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335 + SW+L LF ++ R++G +S + L F+ Sbjct: 121 APTVASRSWMLDLFHRS---RWMGRAS-----------GPVRALLRRAARARLRGFMSAW 166 Query: 336 SNQRV--SYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 ++ V D+ WF + CG A++ T+ D+ V G +T RV V Sbjct: 167 RDRIVLPPRTGDVLWFAL-CGAGCAYAAYELFRLGRATLTWTDLRVVASEGGLTFVRVTV 225 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 L+ +AS+IW+P+GI IG RP ++++IQP Q LAAFPAN+ FP+ V + L P++WL Sbjct: 226 LVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPANLLFPVAVFAIVRLRLEPDIWL 285 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 LMI G QWY+LFNVIAGASAFP D +E A+ F + WWR+++LPG+ PY+VTGAIT Sbjct: 286 CPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPATWWRHVMLPGVLPYFVTGAIT 345 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIV+E SWG L GLGAYIA T+ G +P + LGV +M V+A NR Sbjct: 346 ASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIALGVAVMSLLVIATNRL 405 Query: 573 LWHPLYLYGTRCLRL 587 +W P+Y + R RL Sbjct: 406 VWRPMYAFAERRTRL 420 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/122 (22%), Positives = 56/122 (45%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ P DL E + FR+ + ++ +P +P V + + G W Sbjct: 295 WYVLFNVIAGASAFPADLREAAACFRVRPATWWRHVMLPGVLPYFVTGAITASGGAWNAS 354 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + +E + G T + G+G+YIA D I + M ++ ++L++RPM ++ Sbjct: 355 IVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIALGVAVMSLLVIATNRLVWRPMYAFA 414 Query: 268 NK 269 + Sbjct: 415 ER 416 >gi|225872174|ref|YP_002753629.1| inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake transporter (NitT) family, permease protein [Acidobacterium capsulatum ATCC 51196] gi|225793760|gb|ACO33850.1| inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake transporter (NitT) family, permease protein [Acidobacterium capsulatum ATCC 51196] Length = 587 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 214/529 (40%), Positives = 308/529 (58%), Gaps = 9/529 (1%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA +T+R+ A ++SL+F VY +AA +R L +++ LDI+QSIP+L FL + Sbjct: 64 LPMYALESTVRIFVAYILSLIFAIVYGYIAAYNRWLEALMIATLDILQSIPVLSFLPGVM 123 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + M+L+P + IG EL AI IFT +VWNM FS Y SL +IP++L E R S WQ+ Sbjct: 124 LAMMSLFPNRQIGIELGAILLIFTGEVWNMAFSFYSSLKSIPKELMEACTINRFSRWQRL 183 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 L +PFS GL+WN M+S++ GWFF++ EM VG LPG+GSY+ A D++A Sbjct: 184 IQLELPFSAIGLIWNSMVSVASGWFFLMVCEMFPVGSRNFRLPGLGSYLQTAASNGDVVA 243 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 I++ +LTM+ +I L DQLL+RP+I WS+KF+ E S +L+L R +N L+++ Sbjct: 244 IIWGLLTMMLIIVLTDQLLWRPIIAWSDKFKFENVESAERITSPILHLIRNSNMLQYV-- 301 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 S +P+S G R P +R S + + +V +GI Sbjct: 302 -SRRAVTPISEAFYTRVARGGPTRRRLPAA----DETRRSSRGRTLTYALIVTAAVLGIG 356 Query: 361 WQSIGYIV--NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 + +V + + L ++ +T RV ++IAS+ IPVG+ IGF P +++ Sbjct: 357 TLAFHAMVLLREASTHEFLVLLGAAGMTFLRVNASLLIASLWTIPVGVAIGFHPRLANIA 416 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 QP AQ+ A+FPA FPL+V + + + LM+ GTQWYILFNVIAGA A P+D Sbjct: 417 QPIAQIAASFPATALFPLIVIGLMRLGMGLGIGSIALMLLGTQWYILFNVIAGAMAIPSD 476 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 +EVA F + W +ILPGIFPY VTG ITA GGAWNASIV+E ++T G Sbjct: 477 LREVAGLFRFGNLQRWTTLILPGIFPYLVTGLITASGGAWNASIVAEYFKIQGKTMQTIG 536 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGA I+ +++ G FP ++L +IM V+ +NR +W LY G RL Sbjct: 537 LGAQISAASDHGDFPRLLLATIIMALMVVTINRLVWRRLYHLGETRFRL 585 >gi|254375277|ref|ZP_04990757.1| hypothetical protein FTDG_01471 [Francisella novicida GA99-3548] gi|151572995|gb|EDN38649.1| hypothetical protein FTDG_01471 [Francisella novicida GA99-3548] Length = 574 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 208/574 (36%), Positives = 326/574 (56%), Gaps = 22/574 (3%) Query: 11 ISRRIF-PNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRT 68 I+++IF PN D++ L++ + + + + D + I+LD LP Y RT Sbjct: 7 ITKKIFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDHSHLPYYMLRT 66 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 T+R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 67 TMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFP 126 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+S Sbjct: 127 HSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPYS 186 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 MPGL+WN+M+S S WF + ASE I + GD + LPGIGSYIALA+ + +++AI YA+ Sbjct: 187 MPGLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNIIAIFYALA 244 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWN 304 ++ I L+DQLLFRP++ WS KF+ E + W+ ++K+ + I +S+ Sbjct: 245 AIIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIV 304 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 F+ L N L + I P +++ I W+ V+ I W Sbjct: 305 FW--LINGASFLNKK---INLKSPIRDIKILKKLSC-----IAWYIVIISTCI---WAG- 350 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + + F D Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ Sbjct: 351 NALWHFFPDGDKSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQI 410 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 AA P +FFP+V + + N+W L++ GT WY+LFNVIAG S+ P + E+ Sbjct: 411 GAAIPQPIFFPIVAVLILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTK 470 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 SFH+ GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ Sbjct: 471 SFHLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS 530 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +T E L V+ +C V F+W PLY Sbjct: 531 TTTANNQLHEAALAVVALCSLVALCVIFIWKPLY 564 >gi|118496766|ref|YP_897816.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. novicida U112] gi|194324074|ref|ZP_03057849.1| ABC transporter, permease protein [Francisella tularensis subsp. novicida FTE] gi|118422672|gb|ABK89062.1| ABC-type anion transport system, duplicated permease component [Francisella novicida U112] gi|194321971|gb|EDX19454.1| ABC transporter, permease protein [Francisella tularensis subsp. novicida FTE] Length = 574 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 208/573 (36%), Positives = 324/573 (56%), Gaps = 23/573 (4%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70 +R PN D++ L++ + + + + D + I+LD LP Y RTT+ Sbjct: 9 KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 69 RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+P Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPYSVP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 GL+WN+M+S S WF + ASE I + GD + LPGIGSYIALA+ + ++ AILYA++ + Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNITAILYALVAI 246 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306 + I L+DQLLFRP++ WS KF+ E W+ ++K+ F+ I +S+ F+ Sbjct: 247 IINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVFW 306 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L N L + I P +++ ++ + I CV G A+ W Sbjct: 307 --LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH--- 355 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AA P +FFP+V + + N+W L++ GT WY+LFNVIAG S P + E+ S Sbjct: 412 AAIPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKS 471 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 FH+ GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ Sbjct: 472 FHLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVST 531 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +T E L V+ +C V F+W PLY Sbjct: 532 TTANNQLHEAALAVVALCSLVALCVIFIWKPLY 564 >gi|255524913|ref|ZP_05391861.1| binding-protein-dependent transport systems inner membrane component [Clostridium carboxidivorans P7] gi|255511391|gb|EET87683.1| binding-protein-dependent transport systems inner membrane component [Clostridium carboxidivorans P7] Length = 574 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 211/584 (36%), Positives = 340/584 (58%), Gaps = 26/584 (4%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 ++R++ + D++ F++++ I+ + + GI+ I ++ D+ +LP Y ++ Sbjct: 8 VNRKL--GVLDIIIFLVIVSILYLAIAPGIKGNVNTSGI----QVSTDIRNLPIYVLKSV 61 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 RM +A ++SL+FT +Y +AA + + V++PILDI+QSIP+L FL V+ + L+P Sbjct: 62 GRMTAAYILSLIFTLIYGYIAAHNEKAEKVMMPILDILQSIPVLSFLPAVVLGLIALFPS 121 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 IG EL++I IFT Q WNMTFS Y S+ +P+DLEE S F L+ WQKF L VPF++ Sbjct: 122 HNIGLELSSIILIFTGQAWNMTFSFYHSIKILPKDLEEASGVFGLNKWQKFKRLEVPFAV 181 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 GLVWN MMS SGGWFF++A EM + L GIGS++ A + D A+ + ++ Sbjct: 182 IGLVWNSMMSWSGGWFFLMACEMFTLKGKDFRLEGIGSFLQTAASQGDKKALACGIAALI 241 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 VI L DQL+++P+ VW++KF++E T S+VL L R++ + F+ + P+ Sbjct: 242 FVIVLLDQLVWKPVTVWADKFKMELTESGEAPHSFVLTLLRRSVIVDFL---VKKIYEPI 298 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYI 367 + N+ + + RF + + + + W ++ GV + + + + Sbjct: 299 AENLNE-----AIDRFVVKLASKEKTKEKGIGIGFIVRWIVRILIYGVLLYSGFNAFKLL 353 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + + + ++ + RV +IA I +PVG+ IG +++ +QP Q++A+ Sbjct: 354 M-QLSKNEWGRILPSVGYSFLRVAAAQVIALIWTVPVGVAIGMNKKVANVLQPIIQVVAS 412 Query: 428 FPANVFFPLVVSCVSYYHLNP----NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 PA FP+++ Y +N N+ +LM+ GTQWYILFNVIAGA A P D K A Sbjct: 413 IPATALFPVIL----IYFMNKLGGLNIASVILMLMGTQWYILFNVIAGAMAIPEDLKAAA 468 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +F I GW+ W+ +ILP IFPY +TG +TA GG WNASIVSE ++G + T GLGA I Sbjct: 469 KTFGINGWKRWKVLILPSIFPYLLTGMVTATGGCWNASIVSEYVNFGGRTVSTVGLGALI 528 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +E+TEKG++P +++ +IMC V+ +N+ LW LY+ ++ Sbjct: 529 SEATEKGNYPLLLIATIIMCVVVVGVNKTLWKRLYVLSEEKFKI 572 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 108/205 (52%), Gaps = 5/205 (2%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LR+ +A VI+L++T ++++ VL PI+ ++ SIP ++YFMN Sbjct: 373 LRVAAAQVIALIWTVPVGVAIGMNKKVANVLQPIIQVVASIPATALFPVILIYFMN---- 428 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 K+ G +A++ + W + F++ IP DL+ +++F ++GW+++ L +P Sbjct: 429 KLGGLNIASVILMLMGTQWYILFNVIAGAMAIPEDLKAAAKTFGINGWKRWKVLILPSIF 488 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P L+ M+ + G W + SE + G + G+G+ I+ A ++ + +L A + M Sbjct: 489 PYLLTGMVTATGGCWNASIVSEYVNFGGRTVSTVGLGALISEATEKGNYPLLLIATIIMC 548 Query: 250 GVIFLYDQLLFRPMIVWS-NKFRLE 273 V+ ++ L++ + V S KF++E Sbjct: 549 VVVVGVNKTLWKRLYVLSEEKFKIE 573 >gi|298250430|ref|ZP_06974234.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] gi|297548434|gb|EFH82301.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] Length = 607 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 221/563 (39%), Positives = 322/563 (57%), Gaps = 6/563 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D+L +V+G+I +L+ P + V I+L + LP YA + LRM+ A ++SL Sbjct: 46 DVLIVCVVLGLIALLVVAASRWVAP--LTPKVSISLAPNMLPAYAGYSMLRMMLAYILSL 103 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FT Y AA R G+V+VP+LDI+QSIP+L FL V+ + +P IG ELA++ Sbjct: 104 IFTLAYGHFAATRPRAGLVMVPLLDILQSIPVLSFLPAVVLALVAAFPHSNIGLELASVL 163 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IFT Q WNMTFS Y S +P+DL+E S L WQ+F L VP SM GL+WN MMS Sbjct: 164 LIFTGQAWNMTFSFYHSARTLPKDLQEFSAIANLRPWQRFLKLEVPSSMIGLIWNSMMSW 223 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +GGWFF++ASE V+GD LPG+GSY+ A D +A+ + T++ +I L + + Sbjct: 224 AGGWFFLMASEQFVLGDHSFQLPGLGSYLQAAANAGDTVALFLGLGTLIVLIILINFFFW 283 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KF+LE + P S VL L R + + I F PL + + L L Sbjct: 284 RPLVAWADKFKLELGSEADPPTSPVLSLLRHSALVAGI---QARIFRPLGDLLAGLLNRL 340 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 + E L +L++FW + GV +G ++ ++ H ++ + Sbjct: 341 QPLPSVQQERMLTRKKGLDAGRLLNVFWLLCLLGV-VGWGLWNMVVLLAHISFAGWGRLF 399 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 T R + ++I +P+G+ IG P S ++QP Q++A+ PA FFP+++ Sbjct: 400 IAAGATWLRTLAALLIGVAWTLPLGVAIGLSPRWSKRLQPVVQVVASIPATAFFPILLPL 459 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + +L +LM+ GTQWY+LFNVIAGA A PND KE A+++ +TGWR WR +ILP Sbjct: 460 LVSLPGGLSLAAIVLMLLGTQWYVLFNVIAGAMAIPNDLKEAATTYQVTGWRRWRVLILP 519 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 GIFPY VTG +TA GGAWNASIVSE + ++T GLGA IA + +F ++ L Sbjct: 520 GIFPYLVTGLLTASGGAWNASIVSEYVQFNAHTVQTVGLGAEIAAAATANNFALLLAATL 579 Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583 +M FV+ +NR LW LY R Sbjct: 580 LMAAFVVVINRLLWKRLYALAER 602 >gi|157827293|ref|YP_001496357.1| ABC-type anion transport system permease component [Rickettsia bellii OSU 85-389] gi|157802597|gb|ABV79320.1| ABC-type anion transport system permease component [Rickettsia bellii OSU 85-389] Length = 422 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 199/432 (46%), Positives = 271/432 (62%), Gaps = 24/432 (5%) Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ FS YQSL IP DL E S F+LS +KF L +PF+ GL+WN MMSMSGGWFF+V Sbjct: 3 NIAFSFYQSLKTIPNDLVEASNIFKLSPLKKFLKLELPFATQGLIWNSMMSMSGGWFFLV 62 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 ASE +V+G I +PGIGSYIA AI E+D+++I+Y+++TM VI LYDQ++FRP+IVW++ Sbjct: 63 ASETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYDQIIFRPLIVWAD 122 Query: 269 KFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFP 328 KFR E S V+ LF+KTNF+ ++ + L L +I Sbjct: 123 KFRYENIVKACAPKSMVVDLFKKTNFITIY----------IAKIISNLLSKLYIIFIKPI 172 Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 N L + I W+ + +AI A + ++ + + L VI LG T+ Sbjct: 173 PNLL-----------IAIIWYGCLACLAIYAANKCYDFVKTTISLSEFLLVIKLGFFTLL 221 Query: 389 RVVVLIIIASIIWIPVGI--WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 RV+ ++I+A IIW WI + + K+ P Q+ +AFPAN FP VV +S+Y+L Sbjct: 222 RVITMVILALIIWGAYRCIYWIKNSSY-TEKMMPVIQIASAFPANFLFPFVVIFISHYNL 280 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 NPN+ LS LMI GTQWYILFNVIAG SAFP D KE A+ F + GW WW+ IILPGIFP+ Sbjct: 281 NPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNIILPGIFPHI 340 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 VTG ITA GGAWNASIV+E+ SWG++ + TGLG YI + + V +GV++M +V Sbjct: 341 VTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSLVAIGVVVMSLYV 400 Query: 567 LALNRFLWHPLY 578 + ++R +W PLY Sbjct: 401 IVISRLVWRPLY 412 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 9/199 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLA-AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM-- 124 T LR+++ ++++L+ Y + K+ ++P++ I + P F V++ Sbjct: 219 TLLRVITMVILALIIWGAYRCIYWIKNSSYTEKMMPVIQIASAFPANFLFPFVVIFISHY 278 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 NL P +A F + W + F++ P DL+E + FR+ GW + + Sbjct: 279 NLNP------NIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNII 332 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P P +V ++ + G W + +E++ G+ I G+G YI A D + Sbjct: 333 LPGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSLVAIG 392 Query: 245 MLTMLGVIFLYDQLLFRPM 263 ++ M + + +L++RP+ Sbjct: 393 VVVMSLYVIVISRLVWRPL 411 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/120 (19%), Positives = 54/120 (45%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I F+ PND E ++ F ++ + + + LP + ++ + G W + Sbjct: 4 IAFSFYQSLKTIPNDLVEASNIFKLSPLKKFLKLELPFATQGLIWNSMMSMSGGWFFLVA 63 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 SE G + G+G+YIA++ + ++ V+ M ++ ++ ++ PL ++ + Sbjct: 64 SETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYDQIIFRPLIVWADK 123 >gi|206891166|ref|YP_002247994.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743104|gb|ACI22161.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 570 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/559 (38%), Positives = 335/559 (59%), Gaps = 15/559 (2%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D+ F +V+GI++ +++ E P + V I L+ ++PQYA ++ R+ A ++SL Sbjct: 18 DIAVFFIVLGILSFIIYIASEWGTPYE--RTVEINLNPSNIPQYAIQSLARIFFAYILSL 75 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 F+ Y A++S+ +++P+LDI+QSIP+L FL V+ + L+PGK IG ELA I Sbjct: 76 TFSIWYGYTASRSKIHEKIMIPLLDILQSIPVLSFLPGVVLAMIALFPGKRIGLELACIL 135 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IFT QVWNMTFS Y S+ IP+++ EV + F+ + + KF L +PFS GL+WN MMS+ Sbjct: 136 LIFTGQVWNMTFSFYHSISTIPKEMREVVKVFKFNKFSKFLRLDLPFSAIGLIWNSMMSV 195 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +GGWFF++A EM ++ D LPGIGSYI A E ++ ++Y + TM+ +I + D ++ Sbjct: 196 AGGWFFLMACEMFILEDKDFRLPGIGSYIQTAANEGNIEYVIYGLGTMILLIIILDLFIW 255 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP+IVWS KFR+E +S+VL LF + F++ + L NN L Sbjct: 256 RPLIVWSQKFRIETIPPEEERESFVLNLFSGSIFIKKV--------VDLLNNTINKVEKL 307 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 +F N + R+S ++ I ++ V I ++ G +V++ ++ D++ +I Sbjct: 308 SYRKFSLSGNPVV----NRLSKIMGIISLIIILLVIIWAILKAAG-LVSNISFNDIITII 362 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ RV V ++IA + +PVG++IG P + +Q Q+ A+ PA FP+++ Sbjct: 363 KAAFYSLLRVFVALLIALVWTLPVGVYIGLNPRAAKILQSIVQIAASVPATAVFPVILLF 422 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + ++ LM+ GTQWY+LFN+IAGASA P D E++ ++ + G R W+ +ILP Sbjct: 423 LIKLGGGLDIGAIFLMLLGTQWYLLFNIIAGASAIPKDLIEISRAYGVKGIRKWKTLILP 482 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 GIFPY VTG ITA GGAWNA+IVSE S+G + T GLGA I++S+ G+F ++L Sbjct: 483 GIFPYLVTGLITASGGAWNATIVSEYVSFGGEIMHTAGLGALISQSSASGNFGLLLLSTC 542 Query: 561 IMCCFVLALNRFLWHPLYL 579 M V+ +NR LW L++ Sbjct: 543 FMSLTVVGINRLLWKRLFI 561 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 8/198 (4%) Query: 394 IIIASIIWIPVGIWIGF---RPHISSKIQ-PFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 I A I+ + IW G+ R I KI P +L + P F P VV + Sbjct: 67 IFFAYILSLTFSIWYGYTASRSKIHEKIMIPLLDILQSIPVLSFLPGVVLAMIALFPGKR 126 Query: 450 LWLSL---LMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L L L+IF G W + F+ S P + +EV F + + + LP Sbjct: 127 IGLELACILLIFTGQVWNMTFSFYHSISTIPKEMREVVKVFKFNKFSKFLRLDLPFSAIG 186 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + ++ + G W + E+ R G+G+YI + +G+ V+ G+ M Sbjct: 187 LIWNSMMSVAGGWFFLMACEMFILEDKDFRLPGIGSYIQTAANEGNIEYVIYGLGTMILL 246 Query: 566 VLALNRFLWHPLYLYGTR 583 ++ L+ F+W PL ++ + Sbjct: 247 IIILDLFIWRPLIVWSQK 264 >gi|320107387|ref|YP_004182977.1| binding-protein-dependent transport systems inner membrane component [Terriglobus saanensis SP1PR4] gi|319925908|gb|ADV82983.1| binding-protein-dependent transport systems inner membrane component [Terriglobus saanensis SP1PR4] Length = 589 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/571 (37%), Positives = 329/571 (57%), Gaps = 21/571 (3%) Query: 13 RRIFPNIFDLLAFVLVI----GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 RR +P + DLL + + G++ I + P I+ + P +LP+YA + Sbjct: 24 RRTWPVMLDLLVAAIGLACFYGVVRIATMWMAHAQ-PDVIISLAP-----SALPRYAFFS 77 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 +RM A +SL F Y +AA SRRL +++ LDI+QSIP+L FL ++ + L+P Sbjct: 78 MVRMALAYFLSLAFAIGYGYVAAYSRRLEALMIAGLDILQSIPVLSFLPGVMLAMVALFP 137 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 + IG EL AI IFT Q WN+ FS Y SL +IP++L+E + + S WQ+ W L +P++ Sbjct: 138 SRQIGVELGAIILIFTGQAWNIAFSFYASLKSIPKELDEAATLYGFSRWQRLWQLELPYA 197 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 GL+WN M+S++GGWFF++A EM V+G LPG+GSY+ A + A+L+ + TM Sbjct: 198 AIGLIWNSMVSVAGGWFFLMACEMFVLGPRDFRLPGLGSYLQTAASRGNFPAMLWGIATM 257 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 +G++ L DQL++RP+I WS++F+ E+ S +L+ + + R + S P Sbjct: 258 IGIVVLTDQLVWRPLIAWSDRFKFEQVESKSHVRSPLLHALQHSTAFRSV---SKKIIRP 314 Query: 309 LSNNVKKLCRTLGVIR-FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 L+ +K+ R R H + ++ + RV + I + ++CGV A +I + Sbjct: 315 LN---EKIYRHFAATRTTHIEYDAVKRGAPSRV--LRAIVFIALLCGVGYS-AVHAID-L 367 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + Q L ++ T RV + +++AS+ IPVG+ IGF P ++ QP AQ+ A+ Sbjct: 368 LRSVELQQFLTILRGAAATFLRVNIALVLASLWTIPVGVAIGFNPRLARIAQPVAQIAAS 427 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 PA FP+++ + + L LLM+ GTQWYILFNVIAGA A P D EVA+ F Sbjct: 428 VPATALFPILLLALVRFRGGMGLAAILLMLLGTQWYILFNVIAGAMAIPTDLLEVATLFR 487 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + + W+ +ILPGIFPY +TG +TA GGAWNASIV+E L+T GLG I+ +T Sbjct: 488 FSRIQKWKTVILPGIFPYLITGLLTASGGAWNASIVAEYFRLHDQTLKTFGLGEQISSAT 547 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 + G F ++L ++M V+ +NR +W PL+ Sbjct: 548 DSGQFQLLLLATIVMALMVVTMNRLVWRPLF 578 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 14/170 (8%) Query: 423 QLLAAFPANVFFPLV----VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 +L + P F P V V+ + L +L+ G W I F+ A + P + Sbjct: 114 DILQSIPVLSFLPGVMLAMVALFPSRQIGVELGAIILIFTGQAWNIAFSFYASLKSIPKE 173 Query: 479 FKEVASSFHITGW-RWWRYIILPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIH 533 E A+ + + W R W+ + PY G ++ + G W + E+ G Sbjct: 174 LDEAATLYGFSRWQRLWQLEL-----PYAAIGLIWNSMVSVAGGWFFLMACEMFVLGPRD 228 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 R GLG+Y+ + +G+FP ++ G+ M V+ ++ +W PL + R Sbjct: 229 FRLPGLGSYLQTAASRGNFPAMLWGIATMIGIVVLTDQLVWRPLIAWSDR 278 >gi|208779963|ref|ZP_03247306.1| ABC transporter, permease protein [Francisella novicida FTG] gi|208743967|gb|EDZ90268.1| ABC transporter, permease protein [Francisella novicida FTG] Length = 574 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/573 (36%), Positives = 323/573 (56%), Gaps = 23/573 (4%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70 +R PN D++ L++ + + + + D + I+LD LP Y RTT+ Sbjct: 9 KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 69 RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+P Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPYSVP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 GL+WN+M+S S WF + ASE I + GD + LPGIGSYIALA+ + ++ AILYA+ + Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNITAILYALAAI 246 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306 + I L+DQLLFRP++ WS KF+ E W+ ++K+ F+ I +S+ F+ Sbjct: 247 IINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVFW 306 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L N L + I P +++ ++ + I CV G A+ W Sbjct: 307 --LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH--- 355 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AA P +FFP+V + + N+W L++ GT WY+LFNVIAG S P + E+ S Sbjct: 412 AAIPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKS 471 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 FH+ GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ Sbjct: 472 FHLKGWKWWLKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVST 531 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +T E L V+ +C V F+W PLY Sbjct: 532 TTANNQLHEAALAVVALCSLVALCVIFIWKPLY 564 >gi|299136998|ref|ZP_07030181.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] gi|298601513|gb|EFI57668.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] Length = 590 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/530 (39%), Positives = 312/530 (58%), Gaps = 18/530 (3%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L +LP YA + +R+ A ++SLLF Y +AA SRRL ++V LDI QSIP+L Sbjct: 63 ISLSPRALPLYAFYSIVRIGLAYILSLLFAVGYGYVAAYSRRLEPLMVAGLDICQSIPVL 122 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FL ++ + L+P + IG E+ AI IFT +VWNM FS Y S+ +IPR+L E + +R Sbjct: 123 SFLPGVMLAMVALFPTRQIGVEMGAILLIFTGEVWNMAFSFYSSIKSIPRELSEAATIYR 182 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 S WQ+ W L +P+ GLVWN M+S++GGWFF++A EM V+G LPG+GSY+ A Sbjct: 183 FSRWQRLWQLELPYGAIGLVWNSMVSVAGGWFFLMACEMFVLGTRDFRLPGLGSYLQTAA 242 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 E D AI+ + M+G+I DQL++RP IVWS+KF+ E+ G S +L+L + Sbjct: 243 SENDTRAIVMGLAVMIGIIVAIDQLIWRPAIVWSDKFKFEQVEGGAHVRSPLLHLLTHSG 302 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF---- 349 LR + + P+S N+ C +L R E L L V+ WF Sbjct: 303 ALRTLRRHT---LDPVSENI--YC-SLAQRR----ERRLSLADG--VTEKKGSAWFRWVA 350 Query: 350 -CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 ++ I +A +++ ++ ++ V+ T RV + ++IA+ IPVG+ I Sbjct: 351 VLLLLVAVIYLASEAL-ILLRQVRAPQLVAVLHGAAATFLRVNIALVIAAAWTIPVGVAI 409 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 GF P ++ QP AQ+ A+ PA FP+++ + + LLM+ GTQWYILFNV Sbjct: 410 GFNPKLARLAQPLAQIAASVPATALFPVILLALIRVGGGMGIASILLMLIGTQWYILFNV 469 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 IAGA A P+D +EVA FH + + WR +ILPGIFP+ +TG +TA GGAWNASI++E Sbjct: 470 IAGAMAIPSDLREVAQLFHFSTLQRWRTVILPGIFPFLITGMVTASGGAWNASIIAEYFH 529 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 + ++T GLGA I+ +T+ G F ++L ++M V+ +NR +W PLY Sbjct: 530 LNNQTMQTVGLGAQISSATDHGEFHLLLLSTIVMALMVVTINRLVWRPLY 579 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/209 (20%), Positives = 89/209 (42%), Gaps = 18/209 (8%) Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA----QLLAAFPANVFFPLV----VS 439 F +V I +A I+ + + G+ S +++P + + P F P V V+ Sbjct: 75 FYSIVRIGLAYILSLLFAVGYGYVAAYSRRLEPLMVAGLDICQSIPVLSFLPGVMLAMVA 134 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYII 498 + + LL+ G W + F+ + + P + E A+ + + W R W+ + Sbjct: 135 LFPTRQIGVEMGAILLIFTGEVWNMAFSFYSSIKSIPRELSEAATIYRFSRWQRLWQLEL 194 Query: 499 LPGIFPYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 PY G ++ + G W + E+ G R GLG+Y+ + + Sbjct: 195 -----PYGAIGLVWNSMVSVAGGWFFLMACEMFVLGTRDFRLPGLGSYLQTAASENDTRA 249 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 +V+G+ +M ++A+++ +W P ++ + Sbjct: 250 IVMGLAVMIGIIVAIDQLIWRPAIVWSDK 278 >gi|22299940|ref|NP_683187.1| ABC transporter permease protein [Thermosynechococcus elongatus BP-1] gi|22296125|dbj|BAC09949.1| ABC transporter permease protein [Thermosynechococcus elongatus BP-1] Length = 574 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 200/529 (37%), Positives = 310/529 (58%), Gaps = 15/529 (2%) Query: 52 VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111 + I L LP Y ++T LRML A +ISL+F+ +Y+ +A +R +L+P+LDI+QSIP Sbjct: 49 ITIELSPAVLPSYTAQTLLRMLIAYMISLVFSILYSYIAYYNRTAEKILLPLLDILQSIP 108 Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 +L FL V+ + L+PG +G ELAAI I+T WNMTFS YQSL ++P++L EV++ Sbjct: 109 VLSFLPGVVLALIALFPGSRMGVELAAIILIYTGMAWNMTFSFYQSLISVPQELREVAKI 168 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIAL 231 +RL WQ+ W L +P GL+WN +MS++GGWFF++A E +G+ LPG+GSY+A Sbjct: 169 YRLGWWQRVWTLDLPAGAIGLIWNSVMSVAGGWFFLMAIESFTIGEKTFTLPGLGSYLAT 228 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 A EQD A++Y + ++GVI D L++RP+I W KF++E S++L R+ Sbjct: 229 AANEQDYAALIYGLAVLIGVIITIDILVWRPLIAWGEKFKMEMVEAENVPKSFLLDFLRR 288 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 + LR F+P+ + + R + P N + R++ ++ + Sbjct: 289 SPTLRAFHQ---QIFAPVWERLDEQLRPKHPRQSLAPRNG---QGHWRITPII-----LL 337 Query: 352 VCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 + V +G W +I ++ F ++Q + +T RV+ ++++ + +PVG+ IG Sbjct: 338 ISAVVVG--WGAIAFVQQMFKVSWQQWQQITLGAVLTTLRVMTALLLSLLWTVPVGVAIG 395 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 P + +QP Q+ A+ PA FP+++ ++ + LM+ GT WYILFNVI Sbjct: 396 RNPRAAQVLQPIVQIAASVPATALFPVLLLALANVGGGLEIGSVALMMLGTMWYILFNVI 455 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AGA A P + E A + + W+ WR +ILPGIFPY +TG ITA GGAWNASIVSE + Sbjct: 456 AGAQAIPTELFEAAVVYQLPWWQRWRTLILPGIFPYLMTGIITAVGGAWNASIVSEYVEF 515 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 + +T GLGA I+E++ +G FP ++ +M V+ NR +W PLY Sbjct: 516 QNQTEQTLGLGALISEASVRGDFPLLMAATAVMSLLVVLTNRLVWRPLY 564 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/182 (19%), Positives = 81/182 (44%), Gaps = 5/182 (2%) Query: 407 WIGFRPHISSKIQ-PFAQLLAAFPANVFFP-LVVSCVSYY---HLNPNLWLSLLMIFGTQ 461 +I + + KI P +L + P F P +V++ ++ + + L +L+ G Sbjct: 85 YIAYYNRTAEKILLPLLDILQSIPVLSFLPGVVLALIALFPGSRMGVELAAIILIYTGMA 144 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + F+ + P + +EVA + + W+ + LP + ++ + G W Sbjct: 145 WNMTFSFYQSLISVPQELREVAKIYRLGWWQRVWTLDLPAGAIGLIWNSVMSVAGGWFFL 204 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 + E + G GLG+Y+A + + + ++ G+ ++ ++ ++ +W PL +G Sbjct: 205 MAIESFTIGEKTFTLPGLGSYLATAANEQDYAALIYGLAVLIGVIITIDILVWRPLIAWG 264 Query: 582 TR 583 + Sbjct: 265 EK 266 >gi|148658669|ref|YP_001278874.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] gi|148570779|gb|ABQ92924.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] Length = 581 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 214/565 (37%), Positives = 322/565 (56%), Gaps = 19/565 (3%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++V+ I+ +L GI V I+L + +LP YA + RM +A +SL FT + Sbjct: 32 IIVLIIVGLLALGIWLAEAAPAEVRGPEISLSITALPFYAFHSVGRMAAAYALSLGFTLI 91 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 Y +AA + R VL+P+LD++QS+PIL FL ++ F + P + I ELA+I IFTS Sbjct: 92 YGYVAAYNPRAERVLMPLLDVLQSVPILSFLPVVLLSFTAILP-EGIAVELASIVLIFTS 150 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 QVWNMTF+ YQSL +PR+L E S FR + W++ L +PF L+WN MMS +GGWF Sbjct: 151 QVWNMTFAWYQSLTTVPRELREASSIFRFTRWRRLTTLELPFGALALIWNSMMSWAGGWF 210 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 F++A+E+ +G LPG+G+Y+ A ++L AI Y + T++ VI L DQL++RP++V Sbjct: 211 FLMAAEIFTLGARDFRLPGLGAYLQTAANAENLPAIGYGIATLIVVIVLLDQLIWRPLLV 270 Query: 266 WSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL-CRTLGVIR 324 W+++F+LE P SW L + IG +P+ + L R L + R Sbjct: 271 WADRFKLEMVESDNPPQSWFYDLLQHATLKDVIG----GVVAPVGRTLDALFDRLLPLPR 326 Query: 325 FHFPENFLQLCSNQRVSYM-LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-IWL 382 + S R+ ++ L + V G +G G ++ + + L + I L Sbjct: 327 ATSGDT----NSGFRIGWLFLALIGAAAVAGTLLG------GRMLIQVSPEQWLGIGIGL 376 Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 G T RVV + IA I +P+G++IG +P ++ +QP Q++A+ PA FP++V + Sbjct: 377 GA-TFLRVVAALAIALIWTVPLGVYIGMQPRAAAVLQPIIQIVASVPATALFPVLVLALL 435 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 N+ LLM+ GTQWY+LFNVIAGASA P D + ++GW+ WR +ILP + Sbjct: 436 SIPGGLNIAAVLLMLLGTQWYVLFNVIAGASAIPQDLRYTTDLLQLSGWQRWRTLILPAL 495 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 FPY +TG ITA GGAWNASIV+E +G ++TG+GA I +T G +P ++ L M Sbjct: 496 FPYLITGMITASGGAWNASIVAEFVVFGGQTYQSTGVGAQITSATADGDYPRLLAATLAM 555 Query: 563 CCFVLALNRFLWHPLYLYGTRCLRL 587 V+A+NR +W LY R+ Sbjct: 556 VITVVAINRLVWRRLYRLAETVYRM 580 >gi|312797025|ref|YP_004029947.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454] gi|312168800|emb|CBW75803.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 407 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 188/380 (49%), Positives = 256/380 (67%), Gaps = 8/380 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IG+I + G ++T P + I+LD LP+YA RTTLRML Sbjct: 23 RLLPNRWDFVAFPLIIGLIAMAAIGFEQTMAPISTLKTQAISLDPIYLPEYALRTTLRML 82 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ + +FT Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTV +F+ L+P +V G Sbjct: 83 AAMLAAFVFTLAYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVAFFIALFPTRVAG 142 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AE AAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+GWQ+FW L VPFSMPGL+ Sbjct: 143 AECAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKLEVPFSMPGLI 202 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPG+G+Y+A AI E++L AI + +LTM VI Sbjct: 203 WNMMMSMSGGWFFVVASEAITVGNHTITLPGVGAYLAQAITERNLPAIGWVILTMTLVIL 262 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T SW+L L R+T + P Sbjct: 263 AYDQLLFRPLVAWADKFRMENTASASAPQSWLLDLVRRTRLIH-------QLLVPAGWLF 315 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ R L + P + +++ S + D+ W +V + + W+ IGY+ T+ Sbjct: 316 ARMAR-LPLRWRKLPLVGPAVGPHRKPSRLGDLAWGGLVLAGTVYLLWRVIGYVSTGVTW 374 Query: 374 QDVLYVIWLGCITMFRVVVL 393 +V +V+ +GCIT+ RV+VL Sbjct: 375 DEVWHVLAMGCITLARVLVL 394 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 3/133 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 ++ IF +Q W + F+ P D EV+ FH+TGW R+W+ + +P P + Sbjct: 147 AIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWK-LEVPFSMPGLIWNM 205 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + + G W + SE + G+ + G+GAY+A++ + + P + +L M +LA + Sbjct: 206 MMSMSGGWFFVVASEAITVGNHTITLPGVGAYLAQAITERNLPAIGWVILTMTLVILAYD 265 Query: 571 RFLWHPLYLYGTR 583 + L+ PL + + Sbjct: 266 QLLFRPLVAWADK 278 >gi|156740188|ref|YP_001430317.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] gi|156231516|gb|ABU56299.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] Length = 574 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 213/584 (36%), Positives = 334/584 (57%), Gaps = 23/584 (3%) Query: 12 SRRIF-PNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQY 64 +RR+F P+ D F + G+I +++ G+ + P ++ I+L + +LP Y Sbjct: 5 TRRVFTPSPPDRPRFTVADGVILLIIVGLLALGIWAAESAPAEVRG-PEISLSISALPFY 63 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A + RM +A V+SL+FT +Y +AA + R VL+P+LD++QS+PIL FL ++ Sbjct: 64 ALHSVGRMAAAYVLSLVFTLIYGYVAAYNPRAERVLMPLLDVLQSVPILSFLPIVLLSLT 123 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + P + I ELA+I IFTSQVWNMTF+ YQSL +PR+L E S FR + W++ L Sbjct: 124 AILP-EGIAVELASIVLIFTSQVWNMTFAWYQSLTTVPRELREASAIFRFTRWRRLTVLE 182 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +PF L+WN MMS +GGWFF++A+E+ +G LPG+G+Y+ A E++L AI Y Sbjct: 183 LPFGALALIWNSMMSWAGGWFFLMAAEIFTLGARDFRLPGLGAYLQTAANEENLTAIGYG 242 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + T++ VI L DQL++RP++VW+++F+LE P SW L ++ + + Sbjct: 243 IATLVVVIVLLDQLVWRPLLVWADRFKLEMVESDNPPQSWFYDLVQRAALNNAVAGA--- 299 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P+ L L P + L +N+R S +F +V +A G+ + Sbjct: 300 -VAPIGRVFDALMDRL----LPLPRS-LNAETNRRFSVGWLVFAAIIVAALA-GVLFG-- 350 Query: 365 GYIVNHFTYQDVLYV-IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 G ++ + + + I +G T RVV + IA + P+G++IG +P ++ +QP Q Sbjct: 351 GRLLLQVSLDQWIDIGIGIGA-TFLRVVAALTIALLWTAPLGVYIGTQPRAAAVLQPIVQ 409 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 ++A+ PA FP++V + N+ LLM+ GTQWY+LFNVIAGA+A P D + Sbjct: 410 IVASIPATALFPVLVLALLAVPGGLNVAAVLLMLLGTQWYLLFNVIAGAAAIPQDLRYTT 469 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++GW+ WR +ILP +FPY +TG ITA GGAWNASIV+E +G ++ G+GA I Sbjct: 470 DLLQLSGWQRWRTLILPALFPYLITGMITASGGAWNASIVAEYVVFGGQAYQSIGVGAQI 529 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +T G +P ++ L M V+A+NR +W LY R+ Sbjct: 530 TSATADGDYPRLLAATLAMVVTVVAINRLVWRRLYRLAENVYRM 573 >gi|90577269|ref|ZP_01233080.1| hypothetical protein VAS14_09499 [Vibrio angustum S14] gi|90440355|gb|EAS65535.1| hypothetical protein VAS14_09499 [Vibrio angustum S14] Length = 574 Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 189/535 (35%), Positives = 308/535 (57%), Gaps = 23/535 (4%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + LP RTT+R++ M S +F AAK++ L +++P ++IM+S+P+LGF+ Sbjct: 58 SLSQLPYDMLRTTMRLVIGMFFSFIFAITAGVAAAKNKHLERIILPFINIMESVPLLGFI 117 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 TF+ + F+NL+P V+G E AAIF +FT Q WNM +YQ+L +P++++E ++ F LS Sbjct: 118 TFSTIIFINLFPNSVMGLEAAAIFGVFTGQAWNMALVVYQTLRIVPKEIQEAAQLFNLSP 177 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 WQKFW + P+++PGL+WN M+S S WF +VA+E+I + +PL G+G++I +A+ Sbjct: 178 WQKFWRVEFPYTIPGLIWNAMVSQSAAWFAIVAAEIIPLSGKDMPLHGVGTFIQIALNNA 237 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296 D+ I++A+L ++ I ++DQL FRP++ WS KF+ E SW + T L+ Sbjct: 238 DVKMIIWAVLAIIINIMVFDQLFFRPLVRWSEKFKYESVKTHKHNTSWFYNVLSDTLLLK 297 Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF----WFCVV 352 I P+ N + I + +L S+ + L +F W+ +V Sbjct: 298 RI-------IRPIKNTAE--------IFVNGGRRYLPARSSYALPKTLKLFSVISWYAIV 342 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 +++ Y+ + ++L ++ L T RV+ ++++ +I +PVG+WIG P Sbjct: 343 LYFCTTWSYELWHYVPKN----EILSMVPLMAKTTLRVLAAMLLSLVIGVPVGVWIGLSP 398 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + QP Q+ +A P N+FFPLV + + + NLW L++ GT WY+LFNVIAG Sbjct: 399 KATRIAQPIIQIGSALPPNIFFPLVTIALMATNTSLNLWTIPLIMMGTTWYVLFNVIAGV 458 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 + P + E+A F +TG WW +LP IFPY +TG I+A GGAWN++I +E+ WG Sbjct: 459 TTLPQEMIELAKLFKLTGRTWWLRFMLPAIFPYILTGVISAAGGAWNSAICAELLQWGVS 518 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + T+GLG YI+++T + P+ LG + M V F+W+PLY R ++ Sbjct: 519 TVHTSGLGFYISKATIDNALPQAALGCVAMSVLVGLCIVFIWNPLYKLTERKYKI 573 >gi|206900627|ref|YP_002250486.1| ABC transporter permease protein [Dictyoglomus thermophilum H-6-12] gi|206739730|gb|ACI18788.1| ABC transporter permease protein [Dictyoglomus thermophilum H-6-12] Length = 570 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 206/549 (37%), Positives = 317/549 (57%), Gaps = 20/549 (3%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 T+ +++ + L LP Y+ + LRM+ A ISL+FT VYA AA + L +L+ Sbjct: 36 NTIYSKPTEVISLDLSPQKLPLYSLFSLLRMILAYFISLIFTIVYAYTAAYKKSLEKILI 95 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+LDI+QSIP+L FL + ++++PG +G E+ +I IFT QVWNM FS YQSL +I Sbjct: 96 PLLDILQSIPVLSFLPPVFMAVISMFPGSKLGLEITSIILIFTGQVWNMVFSFYQSLISI 155 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 PRDL+E ++ F+L+ WQ+FWYL +P+S GL+WN MMS +GGWFF++A EM + + Sbjct: 156 PRDLKEAAQLFKLNPWQRFWYLELPYSAIGLIWNSMMSWAGGWFFLMACEMFTLTNQNFV 215 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281 LPG+GSY++ A + DLL I Y + ++ VI L DQL++RP++ WS KF++E Sbjct: 216 LPGLGSYLSFAALKGDLLKIFYGLFALITVIILLDQLVWRPLLSWSQKFKVEYVQAEEYY 275 Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341 +S VL +R++ R PL ++ L + ++ + Q ++S Sbjct: 276 ESKVLLWYRRS---RIFDLLYKKIILPLRERLEILFIS------YYDKKEKQEIKTSKIS 326 Query: 342 YMLD-----IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396 +L+ I F V+ G IG+ I +N ++D++Y +L T+ RV ++I Sbjct: 327 KLLNLIVSTILIFLVLRGF-IGLLKLIINLPLNM--WKDIIYSAFL---TLLRVTTAVLI 380 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +P+G+ IG P +S IQP Q++A+ PA FP++V + N+ +LM Sbjct: 381 ALSWTLPLGVRIGMNPKLSKVIQPIVQIVASVPATAIFPVIVMYLINLPGGLNIASIVLM 440 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + GTQWY+LFN+IAG + PND EV+ ++ W+ +I+P I P+ VTG ITA GG Sbjct: 441 LLGTQWYLLFNIIAGGMSIPNDLIEVSELLKLSKIDKWKILIIPSILPFLVTGGITAMGG 500 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576 A+NASIVSE + + + GLGA I E++ KG+ + L+M V+ +NR W Sbjct: 501 AFNASIVSEYIEFHNQIYKIKGLGALITEASSKGNNSLLAASTLVMALIVVTINRLFWKR 560 Query: 577 LYLYGTRCL 585 L+ L Sbjct: 561 LFKKSEELL 569 >gi|89072382|ref|ZP_01158961.1| hypothetical protein SKA34_06400 [Photobacterium sp. SKA34] gi|89051914|gb|EAR57366.1| hypothetical protein SKA34_06400 [Photobacterium sp. SKA34] Length = 574 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 193/536 (36%), Positives = 308/536 (57%), Gaps = 21/536 (3%) Query: 57 DVH----SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 +VH LP RTT+R++ M S +F AAK++ L +++P ++IM+S+P+ Sbjct: 54 EVHGALSQLPYDMLRTTMRLVIGMFFSFIFAITAGVAAAKNKHLERIILPFINIMESVPL 113 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 LGF+TF+ + F+NL+P V+G E A+IF +FT Q WNM +YQ+L +P++L+E ++ F Sbjct: 114 LGFITFSTIIFINLFPNSVMGLEAASIFGVFTGQAWNMALVVYQTLRIVPQELQEAAQLF 173 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 LS WQKFW + P+++PGL+WN M+S S WF +VA+E+I + +PL G+G++I +A Sbjct: 174 NLSPWQKFWRVEFPYTIPGLIWNAMVSQSAAWFAIVAAEIIPLSGKDMPLHGVGTFIQIA 233 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292 + D+ I++A+L ++ I ++DQL FRP++ WS KF+ E SW + T Sbjct: 234 LNNADVKMIIWAVLAIIINIMVFDQLFFRPLVRWSEKFKYESVKTHKHNTSWFYNVLSDT 293 Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 L+ I N N ++ R+ P+ L+L S +S+ + +FC Sbjct: 294 LLLKRIIRPIKNTAEVFVNGGRRYLSNRK--RYALPKT-LRLFS--VISWYAIVLYFCTT 348 Query: 353 CGVAIGIAWQSIGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 W Y + H+ ++L ++ L T RV+ ++++ +I +P G+WIG Sbjct: 349 --------W---SYELWHYVPKNEILSMVPLMAKTTLRVLAAMLLSLVIGVPAGVWIGLS 397 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P + QP Q+ +A P N+FFPLV + + NLW L++ GT WY+LFNVIAG Sbjct: 398 PRATRIAQPIIQIGSALPPNIFFPLVTIALMATSTSLNLWTIPLIMMGTTWYVLFNVIAG 457 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 + P + E+A F +TG WW +LP IFPY +TG I+A GGAWN++I +E+ WG Sbjct: 458 VTTLPQEMIELAKLFKLTGRTWWLRFMLPAIFPYILTGVISAAGGAWNSAICAELLQWGV 517 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + T+GLG YI+++T + P+ LG + M V F+W+PLY R ++ Sbjct: 518 STVHTSGLGFYISKATIDNALPQAALGCVAMSVLVGLCIVFIWNPLYKLTERKYKI 573 >gi|241667474|ref|ZP_04755052.1| ABC-type anion transport system, duplicated permease component [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876021|ref|ZP_05248731.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842042|gb|EET20456.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 574 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 208/573 (36%), Positives = 324/573 (56%), Gaps = 23/573 (4%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70 +R PN D++ L++ + + + + D + I+LD LP Y RTT+ Sbjct: 9 KKRFLPNKADVIIVALILVVSALAYYAWNDMHQSFIDASSVSAISLDPSHLPYYMLRTTM 68 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ M+ S F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 69 RLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLFPHS 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIF IFTSQ WNM +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+P Sbjct: 129 IMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 GL+WN+M+S S WF + ASE I + GD + LPGIGSYIALA+ + ++ AILYA++ + Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNITAILYALVAI 246 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306 + I L+DQLLFRP++ WS KF+ E W+ ++K+ F+ I +S+ F+ Sbjct: 247 IINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVFW 306 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L N L + I P +++ +++ + I CV G A+ W Sbjct: 307 --LINGASFLNKK---INLKSPIRDIKILKKLSCIAWYIVIISACVWAGNAL---WH--- 355 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AA P +FFP+V + + N+W L++ GT WY+LFNVIAG S+ P + E+ S Sbjct: 412 AAIPQPIFFPIVAVLILGGGGSLNVWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKS 471 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 FH+ GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ Sbjct: 472 FHLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVST 531 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +T E L V+ +C V F+W PLY Sbjct: 532 TTGNNQLHEAALAVVALCSLVALCVIFIWKPLY 564 >gi|186685736|ref|YP_001868932.1| binding-protein-dependent transporters inner membrane component [Nostoc punctiforme PCC 73102] gi|186468188|gb|ACC83989.1| binding-protein-dependent transport systems inner membrane component [Nostoc punctiforme PCC 73102] Length = 579 Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 201/528 (38%), Positives = 314/528 (59%), Gaps = 14/528 (2%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+ ++++LP Y ++T +RM A SL+FT +YA A +SR +L+P+LDI+QSIP+L Sbjct: 52 ISTNINALPGYTAQTLIRMGLAYFFSLIFTLLYAYTAYRSRIAERILIPMLDILQSIPVL 111 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FL V+ ++L+PG+ IG ELAAI IFT WNMTFS YQSL +IP++L E SR +R Sbjct: 112 SFLPGVVLALISLFPGQRIGVELAAILLIFTGMTWNMTFSFYQSLQSIPQELLETSRVYR 171 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ WQ+FW L +P + GLVWN +MS++GGWFF++A E +G+ LPG+GS++ A Sbjct: 172 LNPWQRFWTLELPSGVIGLVWNSVMSVAGGWFFLIAIESFTLGNQDFRLPGLGSFLGTAA 231 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 + D AI + ++ ++ +I D ++RP+I W+ +F+LE SW+L FR++ Sbjct: 232 NKGDFKAIFWGLVLLIAIIVATDFFVWRPLIAWAERFKLEMIETENAPQSWILDTFRRSP 291 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 LR I S F PL + +IR FP + + + ++ + W V Sbjct: 292 TLRAI---SDRVFQPLQTVLDD-----SLIR-SFPVRSVPINAKGNLNLPSFLNW-IFVS 341 Query: 354 GVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 G ++ + W+++ ++ + D VI +T RV++ +I++ + +PVG+ IG Sbjct: 342 GFSLIVLWGTWEAV-LLLRTLGWDDWQQVIKGAMLTALRVIIALILSLLWTVPVGVAIGR 400 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 ++ +QP Q+ A+ PA FP+++ ++ + LM+ GT WYILFNVIA Sbjct: 401 NRRLAQVLQPLVQIAASVPATALFPVLLLGLTRIAGGLQIGAIALMMLGTMWYILFNVIA 460 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 GA + P+D E AS + ++ + WR +ILP IFPY +TG I+A GGAWNASIVSE ++ Sbjct: 461 GAQSIPSDLIEAASVYKLSRLQRWRTLILPAIFPYLITGIISAVGGAWNASIVSEYVTFQ 520 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 + T+GLGA I+ +T G+F ++ IM V+ N +W PLY Sbjct: 521 GRVISTSGLGATISYATATGNFSLLLASTAIMSLLVVLTNHLVWRPLY 568 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 5/180 (2%) Query: 409 GFRPHISSKIQ-PFAQLLAAFPANVFFP-LVVSCVSYY---HLNPNLWLSLLMIFGTQWY 463 +R I+ +I P +L + P F P +V++ +S + + L LL+ G W Sbjct: 88 AYRSRIAERILIPMLDILQSIPVLSFLPGVVLALISLFPGQRIGVELAAILLIFTGMTWN 147 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + F+ + P + E + + + W+ + + LP V ++ + G W I Sbjct: 148 MTFSFYQSLQSIPQELLETSRVYRLNPWQRFWTLELPSGVIGLVWNSVMSVAGGWFFLIA 207 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 E + G+ R GLG+++ + KG F + G++++ ++A + F+W PL + R Sbjct: 208 IESFTLGNQDFRLPGLGSFLGTAANKGDFKAIFWGLVLLIAIIVATDFFVWRPLIAWAER 267 >gi|254372131|ref|ZP_04987624.1| hypothetical protein FTCG_01273 [Francisella tularensis subsp. novicida GA99-3549] gi|151569862|gb|EDN35516.1| hypothetical protein FTCG_01273 [Francisella novicida GA99-3549] Length = 574 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 206/573 (35%), Positives = 321/573 (56%), Gaps = 23/573 (4%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70 +R PN D++ L++ + + + + D + I+LD LP Y RTT+ Sbjct: 9 KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ M+ S F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 69 RLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLFPHS 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIF IFTSQ WNM +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+P Sbjct: 129 IMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSIP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 GL+WN+M+S S WF + ASE I + GD + LPGIGSYIALA+ + +++AI YA++ + Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNIIAIFYALVAI 246 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306 + I L+DQLLFRP++ WS KF+ E W+ ++K+ F+ I +S+ F+ Sbjct: 247 IVNIVLFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVFW 306 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L N L + I P +++ ++ + I CV G A+ W Sbjct: 307 --LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH--- 355 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AA P +FFP+V + + N+W L++ GT WY+LFNVIAG S P + E+ S Sbjct: 412 AAIPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKS 471 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 FH+ GW+WW +P +FPY V G I+A GAWN++I +E+ WG ++ G+GA ++ Sbjct: 472 FHLKGWKWWFKFAIPAVFPYIVCGIISAASGAWNSAIAAELVIWGSNTIKVDGIGALVST 531 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +T E L V+ +C V F+W PLY Sbjct: 532 TTANNQLHEAALAVVALCSLVAVCVIFIWKPLY 564 >gi|167626895|ref|YP_001677395.1| anion ABC transporter permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596896|gb|ABZ86894.1| ABC-type anion transport system, duplicated permease component [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 574 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 207/573 (36%), Positives = 323/573 (56%), Gaps = 23/573 (4%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70 +R PN D++ L++ + + + + D + I+LD LP Y RTT+ Sbjct: 9 KKRFLPNKADVIIVALILVVSALAYYAWNDMHQSFIDASSVSAISLDPSHLPYYMLRTTM 68 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ M+ S F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 69 RLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLFPHS 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIF IFTSQ WNM +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+P Sbjct: 129 IMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 GL+WN+M+S S WF + ASE I + GD + LPGIGSYIALA+ + ++ AILYA++ + Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNITAILYALVAI 246 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFF 306 + I L+DQLLFRP++ WS KF+ E W+ ++K+ + I +S+ F+ Sbjct: 247 IINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQLVNTIKPIFSTIVFW 306 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L N L + I P +++ +++ + I CV G A+ W Sbjct: 307 --LINGASFLNKK---INLKSPIRDIKILKKLSCIAWYIVIISACVWAGNAL---WH--- 355 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ Sbjct: 356 ----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIG 411 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AA P +FFP+V + + N+W L++ GT WY+LFNVIAG S+ P + E+ S Sbjct: 412 AAIPQPIFFPIVAVLILGGGGSLNVWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKS 471 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 FH+ GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ Sbjct: 472 FHLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVST 531 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +T E L V+ +C V F+W PLY Sbjct: 532 TTGNNQLHEAALAVVALCSLVALCVIFIWKPLY 564 >gi|238027857|ref|YP_002912088.1| ABC transporter permease [Burkholderia glumae BGR1] gi|237877051|gb|ACR29384.1| ABC transporter, permease protein [Burkholderia glumae BGR1] Length = 573 Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 196/540 (36%), Positives = 303/540 (56%), Gaps = 23/540 (4%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + L +L Y+ RTT+R L MV S LF+ V+ LAA+ + V++P ++ M+S+P++ Sbjct: 48 VALAPANLLYYSMRTTMRFLIGMVWSTLFSLVFGVLAARYAPMRRVILPFVNFMESVPLV 107 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF+TFT +F+ LYP +G E AIFA+FT Q WNM ++YQ++ +P++L EV+ SFR Sbjct: 108 GFMTFTTGFFLGLYPHNTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELREVADSFR 167 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIAL 231 + WQ+FW L P+S+PG +WN + S + WF +VASE I GDTV+ LPG+GSY+++ Sbjct: 168 YNAWQRFWRLEWPYSVPGFLWNAINSQAAAWFALVASEAIPAANGDTVL-LPGVGSYVSM 226 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD--SWVLYLF 289 A+ A++YA++ ++ I + DQ +FRP++ ++ +F+ + + SW Sbjct: 227 ALDSASYRAVVYALIALVLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCL 286 Query: 290 RKTNFLRFIGYSSWNFFSPLSNN-VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348 + R G + L+N + L R +R L R +++ W Sbjct: 287 ASSRIARSAG----ELLAQLANAWIFGLPRVWYALRIDCLTRLLA-----RANWLWSTIW 337 Query: 349 -FCVVCGVAIGIAWQSIGYIV-NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 F + G A G GY + + QD+ + W T RV + ++++ ++++P+G+ Sbjct: 338 YFALTVGCAYG------GYQLWQYVPKQDLAIMPWWMLETAARVTLAMLLSCLLFVPLGV 391 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 W+ P + QP AQ+LAA P N+++PL+ V H + W +++ GTQWY LF Sbjct: 392 WMACHPRRLTWCQPVAQVLAAIPPNIYYPLIALFVITAHRSLGWWTIPMIMVGTQWYYLF 451 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N IAG A P EV+ FH+ G WWR +LP IFPY VTG I+A GGAWNA+I +E+ Sbjct: 452 NAIAGTLAIPTQITEVSQIFHLKGAMWWRKYMLPAIFPYIVTGTISAAGGAWNAAIAAEI 511 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 WG T+GLGA+I+ +T G LG MC V F+W PLY + R R Sbjct: 512 VQWGSHTASTSGLGAFISTTTANGDHAAAALGCTAMCSMVALCIMFVWQPLYRFAERKFR 571 >gi|134302716|ref|YP_001122684.1| ABC transporter permease family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134050493|gb|ABO47564.1| ABC transporter permease family protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 574 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 201/574 (35%), Positives = 321/574 (55%), Gaps = 25/574 (4%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70 +R PN D++ L++ + + + + D + I+LD LP Y RTT+ Sbjct: 9 KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 69 RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+P Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAMLT 247 GL+WN+M+S S WF + ASE I + GD + LPGIGSYIAL + + +++AI YA++ Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALGLTDSNIIAIFFYALVA 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNF 305 ++ I L+DQLLFRP++ WS KF+ E + W+ ++K+ + I +S+ F Sbjct: 247 IIINIVLFDQLLFRPLVKWSEKFKYESINNKTIDNPWLYRSYKKSQLVNAIKPIFSTIVF 306 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSI 364 + L N L + I P +++ ++ + I CV G A+ W Sbjct: 307 W--LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH-- 356 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ Sbjct: 357 -----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQI 411 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 AA P +FFP+V + + N+W L++ GT Y+LFNVI+G S P + E+ Sbjct: 412 GAAIPQPIFFPIVAVLILAGDGSLNVWCIPLIMTGTSCYVLFNVISGFSNLPTEIIEMTK 471 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 SFH+ G +WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ Sbjct: 472 SFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS 531 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +T + L V+ +C V F+W PLY Sbjct: 532 -TTANNQLHDAALAVVALCSLVALCIIFIWKPLY 564 >gi|217967159|ref|YP_002352665.1| binding-protein-dependent transport systems inner membrane component [Dictyoglomus turgidum DSM 6724] gi|217336258|gb|ACK42051.1| binding-protein-dependent transport systems inner membrane component [Dictyoglomus turgidum DSM 6724] Length = 570 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 205/554 (37%), Positives = 312/554 (56%), Gaps = 30/554 (5%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 T+ +I+ + L LP Y+ + LRM+ A ISL+FT VYA AA + L +L+ Sbjct: 36 NTIYSKPTEIISLDLSPQKLPLYSLFSLLRMIFAYFISLVFTIVYAYTAAYKKSLEKILI 95 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+LDI+QSIP+L FL + + ++PG +G E+ +I IFT QVWNM FS YQSL +I Sbjct: 96 PLLDILQSIPVLSFLPPVFMAVIAMFPGSKLGLEITSIILIFTGQVWNMVFSFYQSLISI 155 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+DL E + +L+ WQ+FWYL +P++ GL+WN MMS +GGWFF++A EM + + Sbjct: 156 PKDLREAASLLKLNPWQRFWYLELPYAAIGLIWNSMMSWAGGWFFLMACEMFTLTNQNFV 215 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE--RTTGIY 279 LPG+GSY++ A + DLL I Y + ++ VI L DQL++RP++ WS KF++E + G Y Sbjct: 216 LPGLGSYLSFAALKGDLLKIFYGLFALITVIVLLDQLVWRPLLAWSQKFKVEYVQAEGYY 275 Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 S VL +R++ F+ Y F PL + ENF L N+R Sbjct: 276 --SSRVLLWYRRSRIFDFL-YKKVIF--PLREKL---------------ENFFVLYYNKR 315 Query: 340 -----VSYMLDIFWFCVVCGVAIGIAWQS-IGYIVNHFTYQDVLY--VIWLGCITMFRVV 391 + ++ + ++ + I + + IG + T ++ +I+ +T+ RV Sbjct: 316 GTQEGKASIVSKLFITLISLITIALVLRGFIGLLRLIITLPLPMWKNIIYSALLTLLRVT 375 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 ++IA +P+G+ IG P +S IQP Q++A+ PA FP++V + N+ Sbjct: 376 TAVLIALSWTLPLGVRIGMNPKLSRLIQPVVQIVASVPATAIFPVIVMYLINLPGGLNIA 435 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 +LM+ GTQWY+LFN IAG + PND E+++ ++ WR +ILP I P+ VTG I Sbjct: 436 SIILMLLGTQWYLLFNTIAGGMSIPNDLIEISALLKLSKIDRWRILILPSILPFVVTGGI 495 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 TA GGA+NASIVSE + + + GLGA I E++ KG + L+M V+ +NR Sbjct: 496 TAMGGAFNASIVSEYIEFQNQIYKIKGLGALITEASSKGDNALLAASTLVMAIMVVTINR 555 Query: 572 FLWHPLYLYGTRCL 585 W L+ L Sbjct: 556 LFWKRLFKKSEELL 569 >gi|320160169|ref|YP_004173393.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319994022|dbj|BAJ62793.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 574 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 211/570 (37%), Positives = 329/570 (57%), Gaps = 16/570 (2%) Query: 20 FDLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 F + +++ G+ +L GI+ P + + V I+L LP YA R+ RM +A ++ Sbjct: 18 FGVADVLVLFGLAALLYAGIRLALNAPPAVREPV-ISLQPQVLPWYALRSVSRMFAAYLL 76 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 S+ FT +Y +AA +RR VL+P+LD++QS+PIL FL ++ + P + + AEL++ Sbjct: 77 SMAFTLIYGRVAAYNRRAEQVLIPLLDVLQSVPILSFLPVVLLGLRAILP-EGLAAELSS 135 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 + IFTSQVWN+TF+ YQSL IP++L E S FRL+ W +F L +PF+ LVWN MM Sbjct: 136 VVLIFTSQVWNLTFAWYQSLRTIPKELREASAIFRLNTWFQFKTLELPFAAIALVWNSMM 195 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 S +GGWFF++A+E+ VG+ LPG+G+Y+ A + ++ AI + +L ++ I + DQL Sbjct: 196 SWAGGWFFLMAAEIFTVGEQDYRLPGLGAYLHEAANQGNIPAIFWGVLALILTIIILDQL 255 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK-KLC 317 ++RP++ W+ +F+LE P SW L + R I + + F+P++ + ++ Sbjct: 256 VWRPLMAWTERFKLEMVENDNPPTSWFYNLIGHS---RIIHWLNQRIFTPINEAIDARMA 312 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 R L L+ ++++ + +I V GV + Q++ + N Sbjct: 313 RWLN-------PPLLRPAHSRKIPWG-EIVLGLVCIGVVLYWGAQALRLLFNLSLSSWSA 364 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 + +G T RV++ ++IA IPVG+ IG P ++S QP Q++A+ PA FP+ Sbjct: 365 IALGIGA-TFLRVLISLLIALAWTIPVGVAIGTNPRLASLFQPLVQVVASVPATAIFPIF 423 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + NL LLM+ GTQWY+LFNVIAGASA P D + A H++ W+ WR + Sbjct: 424 VLLLIQLPGGINLSAILLMLMGTQWYLLFNVIAGASAIPQDLRYTARLIHLSKWQQWRTL 483 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILP +FPY VTG ITA GGAWNASIVSE ++G + T G+GA I +ST +G + ++ Sbjct: 484 ILPALFPYLVTGMITASGGAWNASIVSEYVTFGGKIVNTVGIGALITQSTAQGDYSLLLA 543 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L M V+ +NR W +YL R+ Sbjct: 544 STLAMVVTVVLINRLFWRRMYLLAEERYRM 573 >gi|254368619|ref|ZP_04984635.1| hypothetical protein FTAG_01610 [Francisella tularensis subsp. holarctica FSC022] gi|157121522|gb|EDO65713.1| hypothetical protein FTAG_01610 [Francisella tularensis subsp. holarctica FSC022] Length = 574 Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 200/574 (34%), Positives = 319/574 (55%), Gaps = 25/574 (4%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDVHSLPQYASRTTL 70 +R PN D++ L++ + + + + D + I+LD LP Y RTT+ Sbjct: 9 KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 69 RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+P Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAMLT 247 GL+WN+M+S S WF + ASE I + GD + LP IGSYIAL + + +++AI YA++ Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPDIGSYIALGLTDSNIIAIFFYALVA 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNF 305 ++ I L+DQLLFRP++ WS KF+ E + W+ ++K + I +S+ F Sbjct: 247 IIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKFQLVNAIKPIFSTIVF 306 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSI 364 + L N L + I P +++ ++ + I CV G A+ W Sbjct: 307 W--LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH-- 356 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ Sbjct: 357 -----FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQI 411 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 AA P +FF +V + + N+W L++ GT WY+LFNVI+G S P + E+ Sbjct: 412 GAAIPQPIFFSIVAVLILAGDGSLNVWCIPLIMTGTSWYVLFNVISGFSNLPTEIIEMTK 471 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 SFH+ G +WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ Sbjct: 472 SFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS 531 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +T + L V+ +C V F+W PLY Sbjct: 532 -TTANNQLHDAALAVVALCSLVALCIIFIWKPLY 564 >gi|91205578|ref|YP_537933.1| ABC-type anion transport system permease component [Rickettsia bellii RML369-C] gi|91069122|gb|ABE04844.1| ABC-type anion transport system permease component [Rickettsia bellii RML369-C] Length = 389 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 179/389 (46%), Positives = 250/389 (64%), Gaps = 17/389 (4%) Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFF+VASE +V+G I +PGIGSYIA AI E+D+++I+Y+++TM VI LYD Sbjct: 1 MMSMSGGWFFLVASETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYD 60 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW-------NFFSPL 309 Q++FRP+IVW++KFR E S V+ LF+KTNF+ NFF + Sbjct: 61 QIIFRPLIVWADKFRYENIVKACAPKSMVVDLFKKTNFITIYIAKIISIIFIPCNFF--I 118 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 +N K + L + F + L ++ I W+ + +AI A + ++ Sbjct: 119 NNITKIISNLLSKLYIIFIKPIPNL--------LIAIIWYGCLACLAIYAANKCYDFVKT 170 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + + L VI LG T+ RV+ ++I+A IIW+P+G++IG + K+ P Q+ +AFP Sbjct: 171 TISLSEFLLVIKLGFFTLLRVITMVILALIIWVPIGVFIGLNSSYTEKMMPVIQIASAFP 230 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 AN FP VV +S+Y+LNPN+ LS LMI GTQWYILFNVIAG SAFP D KE A+ F + Sbjct: 231 ANFLFPFVVIFISHYNLNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVK 290 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 GW WW+ IILPGIFP+ VTG ITA GGAWNASIV+E+ SWG++ + TGLG YI + Sbjct: 291 GWLWWKNIILPGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANA 350 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 + V +GV++M +V+ ++R +W PLY Sbjct: 351 SDYSRVAIGVVVMSLYVIVISRLVWRPLY 379 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 8/198 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM--N 125 T LR+++ ++++L+ + ++P++ I + P F V++ N Sbjct: 187 TLLRVITMVILALIIWVPIGVFIGLNSSYTEKMMPVIQIASAFPANFLFPFVVIFISHYN 246 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L P +A F + W + F++ P DL+E + FR+ GW + + + Sbjct: 247 LNP------NIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNIIL 300 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P P +V ++ + G W + +E++ G+ I G+G YI A D + + Sbjct: 301 PGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSRVAIGV 360 Query: 246 LTMLGVIFLYDQLLFRPM 263 + M + + +L++RP+ Sbjct: 361 VVMSLYVIVISRLVWRPL 378 >gi|163849245|ref|YP_001637289.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aurantiacus J-10-fl] gi|222527230|ref|YP_002571701.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus sp. Y-400-fl] gi|163670534|gb|ABY36900.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aurantiacus J-10-fl] gi|222451109|gb|ACM55375.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus sp. Y-400-fl] Length = 570 Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 203/540 (37%), Positives = 305/540 (56%), Gaps = 27/540 (5%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+L + +LP YA + RM A ++S +FT VY +AA + R +L+P+LD++QS+PIL Sbjct: 51 ISLSLTALPFYALYSVGRMAMAYMLSFIFTLVYGYIAAYNPRAERILIPLLDVLQSVPIL 110 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FL ++ + P + EL A+ IFTSQVWNMTF+ YQSL IP++L E S FR Sbjct: 111 SFLPVVLLGLSAILP-QAFAVELTAVVLIFTSQVWNMTFAWYQSLTTIPKELREASSIFR 169 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 S WQ+F L PF P LVWN MMS +GGWFF++A+E+ +G+ LPG+G+++ A Sbjct: 170 FSWWQRFITLEFPFGAPTLVWNSMMSWAGGWFFLMAAEIFTLGERDFRLPGLGAFLQTAA 229 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 DL AI + + ++ VI + DQL++RP++VWS +FRLE + SW L++++ Sbjct: 230 DTGDLGAIGWGLFSLAVVIVVLDQLVWRPLLVWSRRFRLEFVEREEDSTSWFYDLWQRSM 289 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 + +IG ++ L LG P + + +R +F + + Sbjct: 290 LVAWIG-----------RRLRWLNDLLGRWLGQHPADDVPTGERRR-----SLFGWIALA 333 Query: 354 GVAIGIAWQSIG-----YIVNHFTYQDVLYVIWLGCITMF-RVVVLIIIASIIWIPVGIW 407 + + W + + V+ + ++L LG F RV V + IA + +P+G+ Sbjct: 334 VIIVLTGWGLLNGSRFLFSVSLTQWGEIL----LGVAATFGRVSVAMCIALLWTVPLGVL 389 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 IG R I++ +QP Q+LA+ PA FP++V + + NL LM+ GTQWYILFN Sbjct: 390 IGTRQKIAAVLQPVVQILASIPATALFPVLVLALLEFPGGLNLAAIALMMLGTQWYILFN 449 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 VIAG +A P D + + + GWR WR +ILPG+FPY +TG ITA GGAWNASIV+E Sbjct: 450 VIAGVNAIPQDLRFTSDLLQLHGWRRWRTLILPGLFPYLITGLITASGGAWNASIVAEYV 509 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + +T G+G+ IA +T+ G F ++ L M V+ +NR +W LY RL Sbjct: 510 VFNQQTYQTIGIGSTIAAATDAGDFAKLFAATLTMIITVVTINRLVWRRLYRLAEDRYRL 569 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 5/204 (2%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ AM I+LL+T L +++ VL P++ I+ SIP V+ + +PG Sbjct: 371 RVSVAMCIALLWTVPLGVLIGTRQKIAAVLQPVVQILASIPATALFPVLVLALLE-FPG- 428 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G LAAI + W + F++ + IP+DL S +L GW+++ L +P P Sbjct: 429 --GLNLAAIALMMLGTQWYILFNVIAGVNAIPQDLRFTSDLLQLHGWRRWRTLILPGLFP 486 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 L+ ++ + G W + +E +V GIGS IA A D + A LTM+ Sbjct: 487 YLITGLITASGGAWNASIVAEYVVFNQQTYQTIGIGSTIAAATDAGDFAKLFAATLTMII 546 Query: 251 VIFLYDQLLFRPMI-VWSNKFRLE 273 + ++L++R + + +++RLE Sbjct: 547 TVVTINRLVWRRLYRLAEDRYRLE 570 >gi|219847812|ref|YP_002462245.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aggregans DSM 9485] gi|219542071|gb|ACL23809.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aggregans DSM 9485] Length = 583 Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 208/535 (38%), Positives = 296/535 (55%), Gaps = 15/535 (2%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I L + +LP YA R+ RM A +S LFT +Y +AA + R VL+P+LD++QS+PIL Sbjct: 62 IDLSLSALPFYALRSVGRMALAYALSFLFTMIYGYIAAYNARAERVLIPLLDVLQSVPIL 121 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FL ++ + P + + EL A+ IFTSQVWNMTF+ YQSL IPR+L E S FR Sbjct: 122 SFLPVVLLSLSTVLP-EALAVELTAVVLIFTSQVWNMTFAWYQSLTTIPRELREASSIFR 180 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 S WQ+F L PF LVWN MMS +GGWFF++A+E+ +G+ LPG+G+++ A Sbjct: 181 FSRWQRFTTLEFPFGALALVWNSMMSWAGGWFFLMAAEIFTLGERDFRLPGLGAFLQTAA 240 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRKT 292 DL AI + +LT++ VI + DQ ++RP++ W+ +FRLE A SW L R++ Sbjct: 241 NAGDLTAIGWGILTLVAVIVILDQFVWRPLLAWAGQFRLEMIERDDEEAQSWFYDLIRQS 300 Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 +IG + + + R L R P+ +L S +R + + VV Sbjct: 301 VVAGWIG-------GLMGAIDRMIMRRLS--RGPAPDPYLS-GSTRRSWWGWVLVVVSVV 350 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 G + V + + + TM RV + IA + +PVG++IG RP Sbjct: 351 LVGWGGWVGSGLLLSVPLVQWGAIALSV---GATMARVATAMTIALLWTVPVGVFIGTRP 407 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 ++ +QP Q+ A+ PA FP++V NL LLM+ GTQWYILFNVIAGA Sbjct: 408 RAAAILQPIVQIAASVPATALFPVLVLAFLALPGGLNLAAVLLMMLGTQWYILFNVIAGA 467 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 +A P D + + + GW+ WR +ILPG+FPY VTG ITA GGAWNASIV+E + Sbjct: 468 AAIPQDLRFTSELLQLRGWQRWRTLILPGLFPYLVTGLITASGGAWNASIVAEYVVFNQQ 527 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +T G+GA IA +T G F + L M V+ +NR +W LY R+ Sbjct: 528 TYQTIGIGAQIAVATADGDFAGLFAATLAMIVAVVTINRLVWRRLYRLAETKYRM 582 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 5/207 (2%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ +AM I+LL+T R +L PI+ I S+P V+ F+ L Sbjct: 381 TMARVATAMTIALLWTVPVGVFIGTRPRAAAILQPIVQIAASVPATALFPVLVLAFLAL- 439 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG G LAA+ + W + F++ IP+DL S +L GWQ++ L +P Sbjct: 440 PG---GLNLAAVLLMMLGTQWYILFNVIAGAAAIPQDLRFTSELLQLRGWQRWRTLILPG 496 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 P LV ++ + G W + +E +V GIG+ IA+A + D + A L Sbjct: 497 LFPYLVTGLITASGGAWNASIVAEYVVFNQQTYQTIGIGAQIAVATADGDFAGLFAATLA 556 Query: 248 MLGVIFLYDQLLFRPMI-VWSNKFRLE 273 M+ + ++L++R + + K+R+E Sbjct: 557 MIVAVVTINRLVWRRLYRLAETKYRME 583 >gi|223937549|ref|ZP_03629452.1| binding-protein-dependent transport systems inner membrane component [bacterium Ellin514] gi|223893712|gb|EEF60170.1| binding-protein-dependent transport systems inner membrane component [bacterium Ellin514] Length = 572 Score = 343 bits (879), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 207/565 (36%), Positives = 329/565 (58%), Gaps = 25/565 (4%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRD----IVDIVPITLDVHSLPQYASRTTLRMLSA 75 F + +++G++ ++ +GI T V R+ + + I LD+ LP Y + R + A Sbjct: 14 FSWVDLAVLVGLVAVI-YGI--TAVAREWSGQLQPVAEIHLDLRYLPLYTLFSLTRGVIA 70 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 VIS FT Y +AA+ + V++P+LDI+QSIP+LGFL V+ ++L+P + +G E Sbjct: 71 YVISFFFTMTYGYVAARVKGSERVMLPMLDILQSIPVLGFLPGFVLGLIHLFPHRNLGLE 130 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 +A++ IFT QVWNMTFS Y SL ++P +L V+R +L+ WQ+F L + ++ GLVWN Sbjct: 131 IASVLMIFTGQVWNMTFSFYYSLKSVPEELNAVARLSKLTWWQRFLRLDLSYAASGLVWN 190 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 M+SM+GGWFF+ SE V+G LPG+GSY++LAI++ ++ A + ++ M +I Sbjct: 191 SMLSMAGGWFFLTVSEAFVLGSHDFRLPGLGSYMSLAIEQGNVTAQVMGVVAMGSMIVFL 250 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 DQL++RP++ WS KF E + +SW+ R++ + P ++ K Sbjct: 251 DQLVWRPVVAWSQKFSDEDASTRGGTESWLWDRVRRS-----------RLWGPFVRSLSK 299 Query: 316 LC-RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY--IVNHFT 372 L R ++ P+ Q S +RV + + WF V+ ++ G + I Y +++ + Sbjct: 300 LLPRANKMLSAGLPQP--QSRSQKRV-FAQILKWFFVIAALS-GAIFAGIKYFQLLHSLS 355 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 D ++ +T RV+ + +AS+ IPVG+ IG P S +QP Q++A+FPA + Sbjct: 356 KADWKSILLSTAMTFGRVIAAVALASLWTIPVGVMIGRNPRWSRAMQPIIQMVASFPAPM 415 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+VV+ V + L++ GTQWY+LFNVI+G+SA P + EV+ ++ Sbjct: 416 LFPIVVALVLSLGGGLGIGSVFLLLLGTQWYVLFNVISGSSAIPRELWEVSRLKRLSLSA 475 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WR +ILPGIFP +TG ITA GGAWNASIV+E + L T GLGA I+++T++G F Sbjct: 476 RWRKLILPGIFPSLLTGWITAMGGAWNASIVAEYMKYKGQTLSTIGLGALISQATDEGRF 535 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPL 577 + V +M V+ +NR +W PL Sbjct: 536 ALLGAAVGVMSFTVVLVNRLVWRPL 560 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 12/172 (6%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL---SLLMIF-GTQWYILFNVIAGASAF 475 P +L + P F P V + + + NL L S+LMIF G W + F+ + Sbjct: 97 PMLDILQSIPVLGFLPGFVLGLIHLFPHRNLGLEIASVLMIFTGQVWNMTFSFYYSLKSV 156 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG----AITACGGAWNASIVSEVASWGH 531 P + VA +T W+ R++ L Y +G ++ + G W VSE G Sbjct: 157 PEELNAVARLSKLTWWQ--RFLRLD--LSYAASGLVWNSMLSMAGGWFFLTVSEAFVLGS 212 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 R GLG+Y++ + E+G+ V+GV+ M ++ L++ +W P+ + + Sbjct: 213 HDFRLPGLGSYMSLAIEQGNVTAQVMGVVAMGSMIVFLDQLVWRPVVAWSQK 264 >gi|170703959|ref|ZP_02894622.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] gi|170131130|gb|EDS99794.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] Length = 334 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 166/340 (48%), Positives = 224/340 (65%), Gaps = 7/340 (2%) Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M VI YDQ LFRP+I W++KFR+E T SW+L L R+T + + + FF+ Sbjct: 1 MTVVILAYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFA 60 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + +L + G +RF P+ ++ S +DI W V I W+ + ++ Sbjct: 61 KAARIPLRLPLS-GTMRFTLPK------VEKKASRTVDIAWSGFVLIGTAYIVWRVVSFV 113 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 T DV +V+ LG IT+ RVVVLI IAS+IW+P+G+ IG RP ++ K+QP AQ LAA Sbjct: 114 ATGVTMADVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAA 173 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F Sbjct: 174 FPANLLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFR 233 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 I GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T Sbjct: 234 IRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTT 293 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G FP+++LG+ +M FV NR LW PLY + LRL Sbjct: 294 AAGDFPKIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 333 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ + P D E + +FR+ GWQ + +P P V + + G W Sbjct: 208 WYILFNVIAGATSYPNDYREAATNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNAS 267 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE + G T I G+G+YIA D I+ + M + L+++LL+RP+ ++ Sbjct: 268 IVSEAVQWGTTKIEAHGLGAYIAQTTAAGDFPKIILGIAVMSLFVTLFNRLLWRPLYAFA 327 Query: 268 N-KFRLE 273 K RL+ Sbjct: 328 EAKLRLD 334 >gi|322434965|ref|YP_004217177.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX9] gi|321162692|gb|ADW68397.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX9] Length = 590 Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 194/536 (36%), Positives = 307/536 (57%), Gaps = 9/536 (1%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 ++L +LP YA + +R+ A ++SL F Y AA + R+ ++ +LDI+QSIP+L Sbjct: 60 VSLSPRALPAYAFYSVVRIGLAYLLSLAFAIAYGYTAAYNTRIEPFMIAVLDILQSIPVL 119 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FL ++ + L+P + +G EL AI IFT VWNM FS Y SL +IPR+L E +R +R Sbjct: 120 SFLPGVMLAMVGLFPTRHLGVELGAIVLIFTGAVWNMAFSFYSSLKSIPRELIEATRVYR 179 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 S +Q+ L +P++ GL+WN +MS++G WFF++A EM LPG+GSY+ A Sbjct: 180 YSPFQRLVQLELPYAAIGLLWNSIMSVAGAWFFLMACEMFHFRSQDFRLPGLGSYLQTAA 239 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 + + AI + + TM+ +I DQLL+RP+I WS+KF+ E+ S +L L ++N Sbjct: 240 DQGNGHAIAWGLFTMVAIIVATDQLLWRPLIAWSDKFKFEQVESSKRVASPILALLTQSN 299 Query: 294 FLRFIGYSSWNFFSPLSNNV--KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 L + + PL+ V + R + +++ + + + + +L + Sbjct: 300 ALTALKEHTTE---PLTEYVYTRYAERRIAILKR---QEGRPPAAPSKSANLLAYALIAI 353 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 V + +A Q++ +++ L ++ T RV + + +A+ IPVG+ IGF Sbjct: 354 AAVVVLYLARQTL-ILISPLQRSQYLELLKGAAATFGRVNLSLALAAAWTIPVGVAIGFH 412 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P ++ QP AQ+ A+ PA FP+++ + + LM+ GTQWYILFNVIAG Sbjct: 413 PRLARIAQPLAQIAASVPATALFPVILLALVRIGGGLGIGSIALMLLGTQWYILFNVIAG 472 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A A P D KEVA+ FH + + W+ +ILPGIFP+ +TG +TA GGAWNASI++E + Sbjct: 473 ALAIPTDLKEVATLFHFSTLQRWKTVILPGIFPFLITGMVTASGGAWNASIIAEYFRLNN 532 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L+T GLGA I+ +TE+G FP ++LG +++ V+ NR +W PL+ RL Sbjct: 533 QTLQTVGLGAMISNATEQGQFPILLLGTVMISLMVVTTNRLVWRPLFRLAETRYRL 588 >gi|220909907|ref|YP_002485218.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7425] gi|219866518|gb|ACL46857.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7425] Length = 578 Score = 339 bits (869), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 204/530 (38%), Positives = 310/530 (58%), Gaps = 18/530 (3%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I L SLP Y +RT LRML A ++SL F+ YA LA ++ +L+P+LDI+QSIP+L Sbjct: 52 IDLSPASLPSYTARTLLRMLVAYLLSLGFSLGYAYLAFYNKVAERILLPLLDILQSIPVL 111 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FL V+ + L+PG+ IG ELA+I IFT WNMTFS YQSL +P++L EV++ +R Sbjct: 112 SFLPGVVLALIALFPGQQIGVELASIILIFTGMAWNMTFSFYQSLTGVPKELREVAQIYR 171 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 LS WQ FW + +P + GL+WN +MS++GGWFF++A E +G+ L G+GSY+ A Sbjct: 172 LSWWQNFWTVDLPAGVIGLIWNSVMSVAGGWFFLIAIESFTLGNRSFKLAGLGSYLGTAA 231 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 + A+ Y ++ ++GVI L D L++RP+I W KF+ + S+VL R++ Sbjct: 232 NAANYAALTYGLIVLIGVIILIDLLIWRPLIAWGEKFKFQLVEAENVPQSFVLDFLRRSP 291 Query: 294 FLRFIGYSSWNFFSPLSNNVKKL-----CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348 LR + N F+PL + + TL + R F Q + +L F Sbjct: 292 TLRALHL---NLFTPLQETIDRQFATTPASTLPISRAKSSPKFNQWVNR----LLLGGFA 344 Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 F V+ G +W+++ ++ ++ D V+ +T RV+V + ++ + +PVG+ I Sbjct: 345 FIVLWG-----SWEAL-LLLRVLSWADWQTVMLGAILTTIRVLVALALSLLWTVPVGVAI 398 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G P +S +QP Q+ A+ PA FP+++ ++ + LLM+ GT WYILFNV Sbjct: 399 GRSPRLSQLVQPIVQIAASVPATALFPVLLLALANVGGGLQIGSVLLMMLGTMWYILFNV 458 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 IAGA A P + E A+ + ++ + WR +ILPGIFPY +TG ITA GGAWNASIVSE Sbjct: 459 IAGAQAIPTELLEAATVYQLSWSQRWRTVILPGIFPYLITGIITAVGGAWNASIVSEYVE 518 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 + + T GLG+ I++++ G+FP ++ + M V+ NR +W LY Sbjct: 519 FRNQTETTLGLGSIISKASAAGNFPLLLASTVTMSLLVVLTNRLVWRRLY 568 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 86/184 (46%), Gaps = 9/184 (4%) Query: 407 WIGFRPHISSKIQ-PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-----SLLMIF-G 459 ++ F ++ +I P +L + P F P VV ++ L P + S+++IF G Sbjct: 86 YLAFYNKVAERILLPLLDILQSIPVLSFLPGVV--LALIALFPGQQIGVELASIILIFTG 143 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 W + F+ + P + +EVA + ++ W+ + + LP + ++ + G W Sbjct: 144 MAWNMTFSFYQSLTGVPKELREVAQIYRLSWWQNFWTVDLPAGVIGLIWNSVMSVAGGWF 203 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579 I E + G+ + GLG+Y+ + ++ + G++++ ++ ++ +W PL Sbjct: 204 FLIAIESFTLGNRSFKLAGLGSYLGTAANAANYAALTYGLIVLIGVIILIDLLIWRPLIA 263 Query: 580 YGTR 583 +G + Sbjct: 264 WGEK 267 >gi|218885906|ref|YP_002435227.1| binding-protein-dependent transporters inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756860|gb|ACL07759.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 576 Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 208/571 (36%), Positives = 311/571 (54%), Gaps = 18/571 (3%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 D+ + V G++ + GI R I+L LP+YA+ + RM A ++S Sbjct: 20 LDVFGLLFVAGVLGL---GIWFALAHRHAAAGPDISLAPGMLPRYAAYSVGRMFMAYLLS 76 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 +LF+ Y TLAA+SRR G VL+ +LDI+QS+PIL FL ++ + P + + E A++ Sbjct: 77 MLFSLGYGTLAARSRRAGPVLLAVLDILQSVPILSFLPVVLLSLSAVLP-QAVAVEAASV 135 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 IFTSQ WN+TF+ YQ+ +P DL E +R+ WQ+F L +PF+ L+WN +MS Sbjct: 136 VLIFTSQAWNITFAWYQAQTTLPGDLREAVSGYRMGAWQRFRTLDLPFAGVSLLWNSIMS 195 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +GGWFF++A+EM VG LPG+GSY+ A +D AIL + TM+ VI DQL+ Sbjct: 196 WAGGWFFLMAAEMFTVGSRDFRLPGLGSYLQEAAAREDTPAILMGLGTMMVVIVTLDQLV 255 Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK-LCR 318 +RP++ W +F+L +SW L L R + + +P + + L R Sbjct: 256 WRPLLAWGERFKLTMVAEDEQPESWFLDLLRAARRMAPVRALLERVLAPAAEGMDAWLIR 315 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI--VNHFTYQDV 376 FP + + + + +F + VA G+ W+ G + V +++D+ Sbjct: 316 -------RFPPSGESMDVVRHDPWAGRLFGVLLFGCVAFGL-WKGSGLLLQVAPESWRDI 367 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I T RV+ + +A +PVG+ IG ++ +QP Q+ A+ PA FP+ Sbjct: 368 VIGI---AATFLRVMAAMAVALAWTLPVGVLIGTNARLARVLQPVVQIAASIPATALFPV 424 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + N LLM+ GTQWY+LFN+IAGAS+ P D K+ A+ ++ + WR Sbjct: 425 FLMVLVDVTHGLNAAAVLLMLLGTQWYLLFNIIAGASSIPRDLKDTAALIGLSRAQRWRT 484 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILP +FPY VTGAITA GGAWNASIVSE S+G L TG+GA IA +T +G FP + Sbjct: 485 LILPALFPYIVTGAITASGGAWNASIVSEYVSFGGRTLSATGIGAIIARATAEGDFPLLF 544 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G L M V+ NR +W LY R+ Sbjct: 545 AGTLSMIVTVVGFNRLVWRRLYRLAEERFRM 575 >gi|86160237|ref|YP_467022.1| ABC transporter inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85776748|gb|ABC83585.1| ABC transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 579 Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 203/539 (37%), Positives = 301/539 (55%), Gaps = 20/539 (3%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 T PR V+I L + +LP Y + R L+A V+SLLFT Y AA+ R VLV Sbjct: 48 TGAPRPAVEI---DLSLGALPGYTLLSLSRGLAAYVLSLLFTLAYGYWAARDRIAERVLV 104 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P LDI+QSIP+LGF+ V+ + +PG +G ELAA+ IFT Q WNMTFS Y SL +I Sbjct: 105 PALDILQSIPVLGFMPGLVLGLVAAFPGSNVGLELAAVVMIFTGQAWNMTFSFYHSLKSI 164 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 PRDL EV+ R WQ+F ++ +PF GLVWN MMSM+GGWFF++ SE V+GD Sbjct: 165 PRDLTEVATLSRFHWWQRFRWVELPFGAIGLVWNGMMSMAGGWFFLMISESFVLGDKDFR 224 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281 LPG+GSY+++A+ D A+ A++ M +I DQLL+RP++VW+ KFR+E + Sbjct: 225 LPGLGSYMSVAVAHGDGGAMFAAVVAMASMIVAVDQLLWRPVVVWAQKFRVEESGQTEAM 284 Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341 +SW L R++ L + S +++ RT+ P + + Sbjct: 285 ESWFLDFLRRSRLLPWA-----------SGLLRRAVRTVSSTPRPPPRSAPRAGRRS--- 330 Query: 342 YMLDIFWFCVVCGVAIGIAWQSIG--YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + + + W ++G +++ + + +T+ RV++ + ++ Sbjct: 331 -LAGAVSLALFVALLALLGWSAVGLVHLLRRVPFGAWAGIGAAATLTLGRVLLATALGTL 389 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 +P G+ IG P +S +QP Q++A+FPA + FP VV+ ++ + LLM+ G Sbjct: 390 WTVPAGLAIGLSPRLSRILQPVVQVVASFPAPMLFPAVVAVLAAAGVGLGWGSILLMLLG 449 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 TQWYILFNVIAGA+A P D +E A + + + +R + LP +FPY VTG +TA GGAWN Sbjct: 450 TQWYILFNVIAGATAIPADLREAARVYRVGTLQRFRDLYLPAVFPYLVTGWVTAAGGAWN 509 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 ASIVSE S+ L T GLGA I+ + G + + +M V NR +W L+ Sbjct: 510 ASIVSEYMSFRGRVLATDGLGARISHAAASGDLAVLAAAITVMAALVAIFNRLVWRRLH 568 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 9/180 (5%) Query: 411 RPHISSKIQ-PFAQLLAAFPANVFFP-LVVSCVSYYHLNPNLWLSL---LMIF-GTQWYI 464 R I+ ++ P +L + P F P LV+ V+ + N+ L L +MIF G W + Sbjct: 95 RDRIAERVLVPALDILQSIPVLGFMPGLVLGLVAAFP-GSNVGLELAAVVMIFTGQAWNM 153 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP-GIFPYYVTGAITACGGAWNASIV 523 F+ + P D EVA+ W+ +R++ LP G G ++ GG W ++ Sbjct: 154 TFSFYHSLKSIPRDLTEVATLSRFHWWQRFRWVELPFGAIGLVWNGMMSMAGG-WFFLMI 212 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 SE G R GLG+Y++ + G + V+ M ++A+++ LW P+ ++ + Sbjct: 213 SESFVLGDKDFRLPGLGSYMSVAVAHGDGGAMFAAVVAMASMIVAVDQLLWRPVVVWAQK 272 >gi|307152632|ref|YP_003888016.1| binding-protein-dependent transporter inner membrane component [Cyanothece sp. PCC 7822] gi|306982860|gb|ADN14741.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7822] Length = 578 Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 208/529 (39%), Positives = 304/529 (57%), Gaps = 16/529 (3%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I ++ LP Y ++T LRM A +SL FT VYA A +S +L+P+LDI+QSIP+L Sbjct: 52 INTNLSELPSYTAQTLLRMTVAYFLSLGFTLVYAYTAYRSAVAAQILLPLLDILQSIPVL 111 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FL V+ + L+PG+ IG E+AA+ IFT WNMTFS YQSL NIP++L E +R +R Sbjct: 112 SFLPGVVLALIGLFPGQRIGIEIAAVILIFTGMTWNMTFSFYQSLSNIPKELLEAARIYR 171 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ WQ+FW L +P GLVWN +MS++GGWFF++A E +G LPG+GS++A A Sbjct: 172 LNFWQRFWTLELPIGAIGLVWNSVMSVAGGWFFLIAIESFTLGKRSFRLPGLGSFLAKAA 231 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 E + AI + ++ ++GVI L D L++RP+I W +F+ E T S VL R++ Sbjct: 232 DEGNYRAIFWGLMVLIGVIVLLDFLVWRPLIAWVERFKFEMVTSENAPQSEVLDFLRRSP 291 Query: 294 FLRFIGYSSWNFFSPLSNNVKK-LCRTLGVIRFHFPENFLQLCSNQR--VSYMLDIFWFC 350 LR S P NV + L +TL RF + S R + F F Sbjct: 292 TLRAF---SQQILQPFWQNVDRGLNQTL--TRFSRRSFSGKTSSLGRWFNGLFVSGFAFI 346 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW-IPVGIWIG 409 V+ G W+++ ++ D ++ +G I V+ +I S++W +PVG+ IG Sbjct: 347 VIWGT-----WEAV-LLLRTLDLSDWRQLM-IGAIESALRVMTALILSLLWTVPVGVAIG 399 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 P ++ +QP Q++A+ PA FP+++ ++ + LM+ GT WYILFNVI Sbjct: 400 RNPKLAQILQPIVQIVASVPATALFPVLLLFLARLGGGLQIGSVALMMLGTMWYILFNVI 459 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AGA + P++ E A + ++ W+ +ILPGIFPY +TG ITA GGAWNASIVSE + Sbjct: 460 AGAQSIPSELFEAAKIYKLSLIERWQTVILPGIFPYLITGIITAVGGAWNASIVSEYVHF 519 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 L TTGLG I+ +T G+FP ++ +M V+ NR +W LY Sbjct: 520 QGHTLTTTGLGETISVATASGNFPLLLAATGVMSLLVVLTNRLVWRRLY 568 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/182 (20%), Positives = 85/182 (46%), Gaps = 5/182 (2%) Query: 407 WIGFRPHISSKIQ-PFAQLLAAFPANVFFP-LVVSCVSYY---HLNPNLWLSLLMIFGTQ 461 + +R ++++I P +L + P F P +V++ + + + + +L+ G Sbjct: 86 YTAYRSAVAAQILLPLLDILQSIPVLSFLPGVVLALIGLFPGQRIGIEIAAVILIFTGMT 145 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + F+ S P + E A + + W+ + + LP V ++ + G W Sbjct: 146 WNMTFSFYQSLSNIPKELLEAARIYRLNFWQRFWTLELPIGAIGLVWNSVMSVAGGWFFL 205 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 I E + G R GLG+++A++ ++G++ + G++++ ++ L+ +W PL + Sbjct: 206 IAIESFTLGKRSFRLPGLGSFLAKAADEGNYRAIFWGLMVLIGVIVLLDFLVWRPLIAWV 265 Query: 582 TR 583 R Sbjct: 266 ER 267 >gi|281492278|ref|YP_003354258.1| ABC transporter permease [Lactococcus lactis subsp. lactis KF147] gi|161702115|gb|ABX75585.1| ABC transporter, permease protein [Lactococcus lactis subsp. lactis KF147] Length = 599 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 197/569 (34%), Positives = 315/569 (55%), Gaps = 23/569 (4%) Query: 22 LLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 L AF+L++ I I + D V + L + +L ++ RT RM+ M+ S+ Sbjct: 43 LFAFILIVTQITINQPLSSLPSQSSVDDVKKMHDFLSIGNLAYFSMRTMFRMIVGMMWSI 102 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 LF+ + LA K + +++P+++ ++S+P+LGF+TFT + + LYP V+GAE AIF Sbjct: 103 LFSVICGVLAIKFKTARRIILPMVNFLESVPLLGFMTFTTAFLLGLYPNNVMGAEALAIF 162 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+FT Q WN+ S+YQ + +P+DL+EV+ FR S W+KFW L +S+PGL+WN+++S Sbjct: 163 AVFTGQAWNIMLSLYQIMEVVPKDLKEVTSQFRYSAWEKFWRLEFVYSIPGLLWNLVISQ 222 Query: 201 SGGWFFVVASEMIVVG----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 S WF +VASE + V +T+I LPGIGSYI +A+ D A +A++ ++ + + + Sbjct: 223 SAAWFAIVASEQVTVAIPKSETLI-LPGIGSYIQVALDRADFKACGFAVIALIINVVILN 281 Query: 257 QLLFRPMIVWSNKFRL-ERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN-VK 314 L+F+P++ + +R E TT P S V L + +NF G + + + + Sbjct: 282 FLVFQPLVKATYYYRYDEGTTQGNPPKSIVYNLVKASNF----GKILMKWIQKIKDFWIF 337 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 KL R ++R + +L +V + I W+ ++ G A+ I+ + + H + Sbjct: 338 KLPRVWYILRINLIFKYL-----GKVKKYISIIWY-ILLGYAVVISAIKLYRFLPH---E 388 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 D + L +T RVV+ ++IA+ I+ P+G+W+ S IQP Q++ + P+NV+ Sbjct: 389 DFSIIPHLMLLTTLRVVLAMLIAAAIFTPLGVWVASNKRRLSFIQPIGQVVGSIPSNVYT 448 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P +V +S + W+ L++ G QWY FNVIAG A P+D KEV F ++ ++WW Sbjct: 449 PFIVIFISLGYKQLEWWILPLIMVGCQWYYFFNVIAGYLAIPDDIKEVTKIFPLSKFKWW 508 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++P +FPY +T I A G AWNA I +E WG + TGLG YIA G + Sbjct: 509 TRYLIPSMFPYLITAIINAAGAAWNADIAAESLQWGKETINVTGLGQYIA--VNDGIKDK 566 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 LG L MC V F+W PLY Y Sbjct: 567 SALGTLAMCAVVGLCIIFVWQPLYKYARE 595 >gi|170703452|ref|ZP_02894222.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] gi|170131637|gb|EDT00195.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] Length = 333 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 156/338 (46%), Positives = 217/338 (64%), Gaps = 10/338 (2%) Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPL 309 VI YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + + W Sbjct: 4 VILAYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAA 63 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 ++ R + + S + S + DI W V V + +AW+ + ++ Sbjct: 64 RIPLRAPSRN---------DARARAASVRGSSRIGDIAWGTFVILVTVYVAWRVVSFVAT 114 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 T +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFP Sbjct: 115 GVTTGEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFP 174 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 AN+ FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I Sbjct: 175 ANLLFPVFVIAIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIR 234 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T Sbjct: 235 GWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAA 294 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G FP+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 295 GDFPKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 332 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ + P D +E +++FR+ GWQ + +P P V + + G W Sbjct: 207 WYILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNAS 266 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE + GDT + G+GSYIA D I+ + M + L+++LL+RPM ++ Sbjct: 267 IVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFPKIILGIAVMSLFVTLFNRLLWRPMYAYA 326 Query: 268 -NKFRLE 273 ++ RL+ Sbjct: 327 ESRLRLD 333 >gi|257085682|ref|ZP_05580043.1| ABC transporter permease component [Enterococcus faecalis Fly1] gi|256993712|gb|EEU81014.1| ABC transporter permease component [Enterococcus faecalis Fly1] Length = 585 Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 187/548 (34%), Positives = 292/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 47 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + L W+ + GV I + HF +QD + L T RV Sbjct: 340 LLAKLR--HFLKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 569 AFVWQPLY 576 >gi|315151513|gb|EFT95529.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] Length = 590 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 52 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 345 LLAKLR--HFFKTLWYVSLTIVGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 574 AFVWQPLY 581 >gi|315030083|gb|EFT42015.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] Length = 590 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 52 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKFALGTLAMCFVVGLCI 573 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 574 AFVWQPLY 581 >gi|315145489|gb|EFT89505.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] Length = 590 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 52 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVEMAWSFLFSFVFGILAVKYKTARR 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 574 AFVWQPLY 581 >gi|227552838|ref|ZP_03982887.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229546263|ref|ZP_04434988.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229550452|ref|ZP_04439177.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|256852709|ref|ZP_05558079.1| ABC transporter [Enterococcus faecalis T8] gi|293382614|ref|ZP_06628545.1| ABC transporter, permease protein [Enterococcus faecalis R712] gi|293387504|ref|ZP_06632054.1| ABC transporter, permease protein [Enterococcus faecalis S613] gi|307269364|ref|ZP_07550711.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307272307|ref|ZP_07553565.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307275184|ref|ZP_07556332.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307281685|ref|ZP_07561904.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307290727|ref|ZP_07570629.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312899285|ref|ZP_07758621.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312908093|ref|ZP_07767073.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312979014|ref|ZP_07790734.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|227178016|gb|EEI58988.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229304432|gb|EEN70428.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308624|gb|EEN74611.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|256711168|gb|EEU26206.1| ABC transporter [Enterococcus faecalis T8] gi|291080014|gb|EFE17378.1| ABC transporter, permease protein [Enterococcus faecalis R712] gi|291083088|gb|EFE20051.1| ABC transporter, permease protein [Enterococcus faecalis S613] gi|306498227|gb|EFM67742.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306503916|gb|EFM73135.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306508126|gb|EFM77248.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306511002|gb|EFM80014.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|306514301|gb|EFM82869.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625904|gb|EFQ09187.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|311288193|gb|EFQ66749.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311293570|gb|EFQ72126.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315026922|gb|EFT38854.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315033145|gb|EFT45077.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315034115|gb|EFT46047.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315146470|gb|EFT90486.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315156438|gb|EFU00455.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315160071|gb|EFU04088.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315160897|gb|EFU04914.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315169124|gb|EFU13141.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315171730|gb|EFU15747.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315174572|gb|EFU18589.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|315575453|gb|EFU87644.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581015|gb|EFU93206.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] gi|327534689|gb|AEA93523.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] gi|329577146|gb|EGG58617.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 590 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 52 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 574 AFVWQPLY 581 >gi|312904784|ref|ZP_07763929.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|310631875|gb|EFQ15158.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|315576827|gb|EFU89018.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] Length = 590 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 290/548 (52%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 52 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YI S G + LG L MC V Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCI 573 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 574 AFVWQPLY 581 >gi|312952925|ref|ZP_07771782.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310629121|gb|EFQ12404.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|315153623|gb|EFT97639.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] Length = 590 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 52 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 345 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 574 AFVWQPLY 581 >gi|255973271|ref|ZP_05423857.1| ABC transporter permease [Enterococcus faecalis T1] gi|255964289|gb|EET96765.1| ABC transporter permease [Enterococcus faecalis T1] Length = 585 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 47 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 569 AFVWQPLY 576 >gi|257089467|ref|ZP_05583828.1| ABC transporter permease [Enterococcus faecalis CH188] gi|256998279|gb|EEU84799.1| ABC transporter permease [Enterococcus faecalis CH188] Length = 585 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 290/548 (52%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 47 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YI S G + LG L MC V Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCI 568 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 569 AFVWQPLY 576 >gi|256762067|ref|ZP_05502647.1| ABC transporter permease [Enterococcus faecalis T3] gi|256683318|gb|EEU23013.1| ABC transporter permease [Enterococcus faecalis T3] Length = 585 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 47 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 569 AFVWQPLY 576 >gi|29375633|ref|NP_814787.1| ABC transporter, permease protein [Enterococcus faecalis V583] gi|255976265|ref|ZP_05426851.1| ABC transporter permease [Enterococcus faecalis T2] gi|256958551|ref|ZP_05562722.1| ABC transporter permease component [Enterococcus faecalis DS5] gi|256962353|ref|ZP_05566524.1| ABC transporter permease component [Enterococcus faecalis Merz96] gi|256965545|ref|ZP_05569716.1| ABC transporter permease component [Enterococcus faecalis HIP11704] gi|257078141|ref|ZP_05572502.1| ABC transporter permease component [Enterococcus faecalis JH1] gi|257086411|ref|ZP_05580772.1| ABC transporter permease component [Enterococcus faecalis D6] gi|257415672|ref|ZP_05592666.1| ABC transporter permease component [Enterococcus faecalis AR01/DG] gi|257418889|ref|ZP_05595883.1| ABC transporter permease [Enterococcus faecalis T11] gi|257423026|ref|ZP_05600016.1| ABC transporter [Enterococcus faecalis X98] gi|294780797|ref|ZP_06746153.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300859648|ref|ZP_07105736.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|29343094|gb|AAO80857.1| ABC transporter, permease protein [Enterococcus faecalis V583] gi|255969137|gb|EET99759.1| ABC transporter permease [Enterococcus faecalis T2] gi|256949047|gb|EEU65679.1| ABC transporter permease component [Enterococcus faecalis DS5] gi|256952849|gb|EEU69481.1| ABC transporter permease component [Enterococcus faecalis Merz96] gi|256956041|gb|EEU72673.1| ABC transporter permease component [Enterococcus faecalis HIP11704] gi|256986171|gb|EEU73473.1| ABC transporter permease component [Enterococcus faecalis JH1] gi|256994441|gb|EEU81743.1| ABC transporter permease component [Enterococcus faecalis D6] gi|257157500|gb|EEU87460.1| ABC transporter permease component [Enterococcus faecalis ARO1/DG] gi|257160717|gb|EEU90677.1| ABC transporter permease [Enterococcus faecalis T11] gi|257164850|gb|EEU94810.1| ABC transporter [Enterococcus faecalis X98] gi|294452117|gb|EFG20563.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300850466|gb|EFK78215.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|323480296|gb|ADX79735.1| ABC-type anion transport system [Enterococcus faecalis 62] Length = 585 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 47 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 569 AFVWQPLY 576 >gi|227518311|ref|ZP_03948360.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227074232|gb|EEI12195.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] Length = 590 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 52 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 344 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 345 LLAKLR--HFFKTLWYVSLTIVGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 395 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 396 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 455 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 456 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 515 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 516 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 573 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 574 VFVWQPLY 581 >gi|307288219|ref|ZP_07568219.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306500817|gb|EFM70136.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|315165381|gb|EFU09398.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] Length = 590 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 188/559 (33%), Positives = 289/559 (51%), Gaps = 52/559 (9%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 52 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 112 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 171 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 172 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 231 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 232 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 291 Query: 275 TTGIYPADSWVLYLFRKTNFLR-----FIGYSS---------WNFFSPLSNNVKKLCRTL 320 P S + +L +K + F+ +S W FF + L R L Sbjct: 292 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYGLPKVWYFF-----KLDYLYRLL 346 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-TYQDVLYV 379 +R F + + + + V C + + HF +QD + Sbjct: 347 AKLRHFF-----------KTLWYVSLTIIGVYCSIKL-----------YHFLPHQDFSMI 384 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 L T RV + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V Sbjct: 385 PRLTLYTTLRVTLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVL 444 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 +S W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++ Sbjct: 445 IISMGFNKLEWWILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLI 504 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P I PY +T I A G AWNA I +E WG + TGLG YIA + G + LG Sbjct: 505 PSILPYLITAIINAAGAAWNADIAAESIQWGKKSIDVTGLGQYIAAN--DGVKDKSALGT 562 Query: 560 LIMCCFVLALNRFLWHPLY 578 L MC V F+W PLY Sbjct: 563 LAMCFVVGLCIAFVWQPLY 581 >gi|257082979|ref|ZP_05577340.1| ABC transporter permease component [Enterococcus faecalis E1Sol] gi|256991009|gb|EEU78311.1| ABC transporter permease component [Enterococcus faecalis E1Sol] Length = 585 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 47 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G QWY FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 451 WILPLIMVGCQWYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YIA + G + LG L MC V Sbjct: 511 INAAGAAWNADIAAESIQWGTKSIDVTGLGQYIAAN--DGVKDKSALGTLAMCFVVGLCI 568 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 569 AFVWQPLY 576 >gi|28378703|ref|NP_785595.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|28271540|emb|CAD64445.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum WCFS1] Length = 580 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 181/560 (32%), Positives = 308/560 (55%), Gaps = 43/560 (7%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G +TT +D L + L A RTT R+ M S+LF+ ++ LAA+ R Sbjct: 47 QGYLDTTGGKDY-------LTMSHLVAAALRTTTRLFIGMGYSILFSLIFGILAARYRSA 99 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 V++PI+++++S+P+LGFLTFT +FM L+P V+G E AIF +FT+Q WN+ ++YQ Sbjct: 100 RYVILPIVNLLESVPLLGFLTFTTAWFMGLFPNNVLGVEAVAIFGVFTAQAWNIMLALYQ 159 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE---MI 213 SL P DL V++ F + WQ+FW L ++ P ++WN+++S S WF +VA E ++ Sbjct: 160 SLRVTPEDLMTVAKQFGCNSWQRFWRLEFLYATPSILWNIVISQSAAWFALVACEQATIV 219 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 V + + LPGIGSYI +A+ + A++ A++ ++ + L + +F+P+I + ++ Sbjct: 220 VPKNETLVLPGIGSYIQIALDTANFGAVINAVIALVICVLLVNVFIFQPLIKGTAHYKYG 279 Query: 274 RTTGIY-PADSWV--LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHF--- 327 +T P S V L + K L VK+L R IR+ + Sbjct: 280 TSTDSQLPQQSQVYDLMVMAKVPLL-----------------VKRLHRH---IRYWWLYG 319 Query: 328 -PENFLQLCSNQ--RVSYMLDIFWFCVVCGVAIGIAWQSIG-YIVNHFTYQDVLYVIWLG 383 P+ + +L ++ R+ ++W + + I + +G ++ + + ++ + Sbjct: 320 APKQWQKLGFSRIIRILKKYTVYW-RIAWWLVIAVGLYRLGVLLIKYLDWINLSVLFKWT 378 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T RV++ ++++++I+IP+ +W+ IQP Q+L + PA+++ P+V ++ Sbjct: 379 FLTTSRVLIAVLLSALIFIPLAVWVASNARRLKLIQPVGQVLGSIPADIYIPIVALMITL 438 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + W+ L++ GTQWY FN+IAG A P+D K+V + FH++GWRWW + ++P +F Sbjct: 439 TGTTQHWWVIPLIMTGTQWYFFFNIIAGYLAIPSDIKDVVNIFHLSGWRWWTHFLIPSLF 498 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P ++T I A G AWNA I +E+ SWG TGLGAYIA++ P GVLI+C Sbjct: 499 PSFITAIINAAGAAWNADIAAELISWGTHQYAVTGLGAYIAQNINNK--PAEATGVLIIC 556 Query: 564 CFVLALNRFLWHPLYLYGTR 583 V +W PLY + R Sbjct: 557 VIVGLCVVLIWQPLYRFAER 576 >gi|328676224|gb|AEB27094.1| ABC transporter, permease protein [Francisella cf. novicida Fx1] Length = 445 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 170/452 (37%), Positives = 257/452 (56%), Gaps = 22/452 (4%) Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G E AAIF IFTSQ WNM +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+PG Sbjct: 1 MGLEAAAIFGIFTSQAWNMALILYQTIRIVPTELTEAATAFKLNAWQRFWKIELPYSVPG 60 Query: 192 LVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 L+WN+M+S S WF + ASE I + GD + LPGIGSYIALA+ + +++AI YA+ ++ Sbjct: 61 LLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALALTDSNIIAIFYALAAII 118 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG--YSSWNFFS 307 I L+DQLLFRP++ WS KF+ E + W+ ++K+ + I +S+ F+ Sbjct: 119 INIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIVFW- 177 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 L N L + I P +++ ++ + I CV G A+ W Sbjct: 178 -LINGASFLNKK---INLKSPTRDIKILKKLSCTAWYIVIISACVWAGNAL---WH---- 226 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ A Sbjct: 227 ---FFPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGA 283 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 A P +FFP+V + + N+W L++ GT WY+LFNVIAG S P + E+ SF Sbjct: 284 AIPQPIFFPIVAVLILAGDGSLNVWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSF 343 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 H+ GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ + Sbjct: 344 HLKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTT 403 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 T E L V+ +C V F+W PLY Sbjct: 404 TANNQLHEAALAVIALCSLVALCVIFIWKPLY 435 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 4/197 (2%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TT+R+ AM+IS+ S + + PI+ I +IP F F +V + L Sbjct: 242 ETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIF--FPIVAVLIL 299 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + + I I T W + F++ N+P ++ E+++SF L GW+ ++ +P Sbjct: 300 AGDGSL--NVWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFHLKGWKWWFKFAIP 357 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 P +V ++ + G W +A+E+++ G I + GIG+ ++ L A++ Sbjct: 358 AVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLHEAALAVI 417 Query: 247 TMLGVIFLYDQLLFRPM 263 + ++ L +++P+ Sbjct: 418 ALCSLVALCVIFIWKPL 434 >gi|256618637|ref|ZP_05475483.1| ABC transporter permease component [Enterococcus faecalis ATCC 4200] gi|256598164|gb|EEU17340.1| ABC transporter permease component [Enterococcus faecalis ATCC 4200] Length = 585 Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 185/548 (33%), Positives = 289/548 (52%), Gaps = 30/548 (5%) Query: 43 TVPRDIVDIVPITLDVHSLPQ----YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 T+P + P D P ++ RT RM+ M S LF+FV+ LA K + Sbjct: 47 TLPSEEFLATPSKTDDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARR 106 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V++P+++ ++S+P+LGFLTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + Sbjct: 107 VILPLVNFLESVPLLGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIM 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-- 216 IP DL V+ F+ + W+KFW L +S+PGL+WN+++S + WF +VASE V Sbjct: 167 EVIPSDLVNVTDQFKYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFP 226 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE-R 274 +T + LPGIGSYI +A+ D + L+A+ +L + + + L+F+P++ + F+ E Sbjct: 227 KETNLYLPGIGSYIQVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETD 286 Query: 275 TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFL-Q 333 P S + +L +K ++ + F ++ K + + F ++L + Sbjct: 287 VESTTPPKSIIYHLLKKATLTKYFSKAFVKFSHFWIYDLPK-------VWYFFKLDYLYR 339 Query: 334 LCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHF-TYQDVLYVIWLGCITMFRV 390 L + R + W+ + GV I + HF +QD + L T RV Sbjct: 340 LLAKLR--HFFKTLWYVSLTIIGVYCSIK-------LYHFLPHQDFSMIPRLTLYTTLRV 390 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +++A II+ P+ IW+ S +QP Q+L + P+NV+ P +V +S Sbjct: 391 TLAMVVAGIIFTPLAIWVANDNRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEW 450 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W+ L++ G Q Y FNVIAG A P+D ++V F ++ W+WW ++P I PY +T Sbjct: 451 WILPLIMVGCQGYFFFNVIAGYLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAI 510 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I A G AWNA I +E WG + TGLG YI S G + LG L MC V Sbjct: 511 INAAGAAWNADIAAESIQWGKKSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCI 568 Query: 571 RFLWHPLY 578 F+W PLY Sbjct: 569 AFVWQPLY 576 >gi|167909682|ref|ZP_02496773.1| putative transmembrane transporter [Burkholderia pseudomallei 112] Length = 310 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 148/262 (56%), Positives = 192/262 (73%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIG 299 SW+L L + + + +G Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG 300 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 ++ IF +Q W + F+ P+D E + S TGW R+WR + +P P V A Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + + G W + SE S G + + G+GAY+A + + V Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242 >gi|167917694|ref|ZP_02504785.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 317 Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 148/262 (56%), Positives = 192/262 (73%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIG 299 SW+L L + + + +G Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG 300 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 ++ IF +Q W + F+ P+D E + S TGW R+WR + +P P V A Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + + G W + SE S G + + G+GAY+A + + V Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242 >gi|167844450|ref|ZP_02469958.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] Length = 321 Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 148/262 (56%), Positives = 192/262 (73%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNFLRFIG 299 SW+L L + + + +G Sbjct: 279 GPAPRSWLLDLLHRASLPQRLG 300 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 ++ IF +Q W + F+ P+D E + S TGW R+WR + +P P V A Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + + G W + SE S G + + G+GAY+A + + V Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242 >gi|167718237|ref|ZP_02401473.1| putative transmembrane transporter [Burkholderia pseudomallei DM98] Length = 298 Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 147/257 (57%), Positives = 189/257 (73%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRKTNF 294 SW+L L + + Sbjct: 279 GPAPRSWLLDLLHRASL 295 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 ++ IF +Q W + F+ P+D E + S TGW R+WR + +P P V A Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + + G W + SE S G + + G+GAY+A + + V Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242 >gi|167737269|ref|ZP_02410043.1| ABC transporter, permease protein [Burkholderia pseudomallei 14] Length = 292 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 147/254 (57%), Positives = 188/254 (74%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+++ +P D+ I+L +LP YA RT LRML+A+ S +FTF YATLAAKSR Sbjct: 39 GVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALGASFVFTFAYATLAAKSRAAQ 98 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELAAIFAIFTSQ WNM FS YQS Sbjct: 99 AVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELAAIFAIFTSQAWNMAFSFYQS 158 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M+SMSGGWFFVVASE I VG Sbjct: 159 LRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAMLSMSGGWFFVVASEAISVGG 218 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQLLFRPM+ W++KFR ++T Sbjct: 219 LRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQLLFRPMVAWAHKFRCDQTVS 278 Query: 278 IYPADSWVLYLFRK 291 SW+L L + Sbjct: 279 GPAPRSWLLDLLHR 292 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 ++ IF +Q W + F+ P+D E + S TGW R+WR + +P P V A Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWR-LEVPFAMPGLVWNA 197 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + + G W + SE S G + + G+GAY+A + + V Sbjct: 198 MLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAV 242 >gi|83589273|ref|YP_429282.1| binding-protein dependent transport system inner membrane protein [Moorella thermoacetica ATCC 39073] gi|83572187|gb|ABC18739.1| Binding-protein-dependent transport systems inner membrane component [Moorella thermoacetica ATCC 39073] Length = 573 Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 180/545 (33%), Positives = 290/545 (53%), Gaps = 23/545 (4%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + + LP YA R+ LRML A ++SL+FT Y A R L+PILDI+QS+PIL Sbjct: 39 VVTSISVLPYYAFRSFLRMLGAYLLSLIFTLTYGYKAGTDTRAERWLIPILDILQSVPIL 98 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF V +F++L+ G+++G ELA+IF IFTSQ WNMTF Y+SL IPRDL E + ++R Sbjct: 99 GFFPAAVYFFVSLFQGRLLGVELASIFLIFTSQAWNMTFGFYESLTTIPRDLLEATVAYR 158 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 ++GW++F L +P +P LV+N +MS +GGW+F++A+E+I +G LPG+GSY+ Sbjct: 159 VTGWRRFRTLYLPAGIPKLVYNSIMSWAGGWYFLIAAEIIAIGPVEYSLPGLGSYLIRTT 218 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 + +L + +LT++ +I + + ++RP+ W+ F+ E +G Sbjct: 219 ERGELGLTMVGLLTLVALITMMNIFIWRPLSTWAENFKYEFGSG------------GSNR 266 Query: 294 FLRFIGYSSW---NFFSPLSNNVKK----LCRTLGVIRFHF---PENFLQLCSNQRVSYM 343 +GY W F + V K L R +G + PE + + C Sbjct: 267 LPSGLGYRLWWQAPGFREIRIGVIKGGAFLGRAVGNLGARLAPGPEKWQRWCRYLARVER 326 Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 L + ++ A+ ++G + V + + FR++ +++ +P Sbjct: 327 LVAWGLALLLVYALVRGLLALGTLFLEPWQPQVFSIPAALLFSFFRLMAAYLLSLAWTLP 386 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 V IWIG + + P ++LA+ PA FP++V + NL LL++ G QWY Sbjct: 387 VAIWIGHNERVYEFLTPVFEILASVPATALFPIIVFVLIGLTGGMNLAAILLVLTGMQWY 446 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 +LFN+IAG + P D KE A++F + GW + R ++LP + P +TG+ITA GG WNA IV Sbjct: 447 LLFNLIAGVKSIPGDLKEAAAAFGLRGWGYLRRVVLPAMVPSLITGSITAWGGGWNALIV 506 Query: 524 SEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582 +E + G+G+ + +T GSF + ++ M ++ +NRF W LY Sbjct: 507 AEYVVYAGHTYTAFGIGSLLDMATYGSGSFQVIWSSLIAMMVTIVLMNRFFWRRLYEMAA 566 Query: 583 RCLRL 587 R ++ Sbjct: 567 RRFKI 571 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 P V S+P + R+++A ++SL +T A + R+ L P+ +I+ S+P Sbjct: 354 PWQPQVFSIPAALLFSFFRLMAAYLLSLAWTLPVAIWIGHNERVYEFLTPVFEILASVPA 413 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 F ++ F+ + G G LAAI + T W + F++ + +IP DL+E + +F Sbjct: 414 TAL--FPIIVFVLI--GLTGGMNLAAILLVLTGMQWYLLFNLIAGVKSIPGDLKEAAAAF 469 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 L GW + +P +P L+ + + GGW ++ +E +V GIGS + +A Sbjct: 470 GLRGWGYLRRVVLPAMVPSLITGSITAWGGGWNALIVAEYVVYAGHTYTAFGIGSLLDMA 529 Query: 233 IKEQDLLAILY-AMLTMLGVIFLYDQLLFRPMI-VWSNKFRLE 273 +++ +++ M+ I L ++ +R + + + +F++E Sbjct: 530 TYGSGSFQVIWSSLIAMMVTIVLMNRFFWRRLYEMAARRFKIE 572 >gi|88062879|gb|ABD39044.1| binding protein dependent transporter [Mesorhizobium loti] Length = 194 Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 126/187 (67%), Positives = 162/187 (86%), Gaps = 3/187 (1%) Query: 86 YATLAAKSRRLG---MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 +AT ++ ++L +V++P+LDI+QS+PILGFLTFTVV+FMNL+PG+V+GAELA++FAI Sbjct: 4 FATAESQPKKLARAELVMIPLLDILQSVPILGFLTFTVVFFMNLFPGQVLGAELASVFAI 63 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 FTSQ WNMTFS+YQS+ N+P+DLEE ++SF LSGWQ+FW L VPF+MPGL+WN MMSMSG Sbjct: 64 FTSQAWNMTFSLYQSIRNVPKDLEEATQSFHLSGWQRFWRLDVPFAMPGLIWNAMMSMSG 123 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 GWFFVVASE I VG+T + LPGIGSY+A+AI++QDL AILYAML ML VI YDQLLFRP Sbjct: 124 GWFFVVASEAITVGNTTVTLPGIGSYVAMAIQQQDLPAILYAMLAMLLVIIAYDQLLFRP 183 Query: 263 MIVWSNK 269 ++ W+ + Sbjct: 184 IVAWAAE 190 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 3/135 (2%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 S+ IF +Q W + F++ P D +E SFH++GW R+WR + +P P + A Sbjct: 59 SVFAIFTSQAWNMTFSLYQSIRNVPKDLEEATQSFHLSGWQRFWR-LDVPFAMPGLIWNA 117 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + + G W + SE + G+ + G+G+Y+A + ++ P ++ +L M ++A + Sbjct: 118 MMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVAMAIQQQDLPAILYAMLAMLLVIIAYD 177 Query: 571 RFLWHPLYLYGTRCL 585 + L+ P+ + + Sbjct: 178 QLLFRPIVAWAAEII 192 >gi|156740134|ref|YP_001430263.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] gi|156231462|gb|ABU56245.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] Length = 671 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/327 (46%), Positives = 211/327 (64%), Gaps = 15/327 (4%) Query: 40 QETTVPRDIVDI--VPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 Q + P D+ + ++LD +LP Y RT RM A+++SLLFTF ATLAAKSRR Sbjct: 40 QGASQPFDVAATPDLTVSLDPINLPYYGLRTVFRMFLAVLLSLLFTFTVATLAAKSRRAE 99 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 V++P LD +QS+PILGFLT T F+ ++ G ++G E A+IFAIFTSQVWNM FS Y S Sbjct: 100 TVIIPALDFLQSLPILGFLTVTTAIFIGMFRGSLLGLEAASIFAIFTSQVWNMAFSFYHS 159 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI-VVG 216 L PR+L E + RLS W+KFW L VPF+MPGL+WN MMS+SGGWFFVVASE+I VVG Sbjct: 160 LITTPRELREAAAVLRLSPWKKFWNLDVPFAMPGLIWNTMMSVSGGWFFVVASEVISVVG 219 Query: 217 -DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275 D LPGIGSYIALAI++ D+ A++YA LT+L +I +YDQ++FRP++ WS KF+ E++ Sbjct: 220 RDNDQYLPGIGSYIALAIEQADIGAMVYAGLTLLIIILIYDQVIFRPIVAWSEKFKFEQS 279 Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335 A SW+L L +++ F S + +++ T+ V P + +++ Sbjct: 280 EAQEVAQSWMLRLLQRSGFA--------GSLSAIGAAIRRSVPTIPV--REVPGSPVEVQ 329 Query: 336 SNQR-VSYMLDIFWFCVVCGVAIGIAW 361 + R + +D W+ +V V + W Sbjct: 330 PDPRPIDRAIDRVWYAIVIAVTLWAVW 356 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 121/259 (46%), Positives = 153/259 (59%), Gaps = 13/259 (5%) Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIG-IAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 + L N+RV D+ C V G +AW +VL +WLG +T Sbjct: 424 DLAALLRNERVGAPDDLAAACAAPMVPAGKVAWS------------EVLECLWLGLLTTV 471 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RVV+ I I++++W P+G+WIG RP ++ QP AQ AAFPAN+ FP+ V ++ Y L Sbjct: 472 RVVIWIGISTLVWTPIGVWIGLRPRVAQFAQPLAQFAAAFPANLLFPVAVVLIATYALPQ 531 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 NL+ + LMI G QWYILFNVIAG + PND KE A + GW WWR +I+P IFP +VT Sbjct: 532 NLFQAPLMILGAQWYILFNVIAGTVSIPNDLKEAAQVLGLRGWAWWRKLIIPAIFPAFVT 591 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G ITA GG+WNASIVSEV SWG L +GLGAYIA + P V LG+L+M VLA Sbjct: 592 GGITASGGSWNASIVSEVVSWGATTLTLSGLGAYIAYWSTGEFNPHVGLGMLVMGSLVLA 651 Query: 569 LNRFLWHPLYLYGTRCLRL 587 NR W LY RL Sbjct: 652 FNRLFWRWLYALAETRFRL 670 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ +IP DL+E ++ L GW + L +P P V + + G W Sbjct: 545 WYILFNVIAGTVSIPNDLKEAAQVLGLRGWAWWRKLIIPAIFPAFVTGGITASGGSWNAS 604 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE++ G T + L G+G+YIA + + ML M ++ +++L +R + + Sbjct: 605 IVSEVVSWGATTLTLSGLGAYIAYWSTGEFNPHVGLGMLVMGSLVLAFNRLFWRWLYALA 664 Query: 268 N-KFRLE 273 +FRL+ Sbjct: 665 ETRFRLD 671 >gi|312797024|ref|YP_004029946.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454] gi|312168799|emb|CBW75802.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 212 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 117/194 (60%), Positives = 148/194 (76%) Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 I IAS++W+P+G+ IG RP ++ K+QP AQ LAAFPAN+ FP+ V + + LNP++WLS Sbjct: 18 IAIASVVWVPLGVLIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIVRFGLNPDIWLS 77 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 L++ GTQWYILFNVIAGASA+PNDFKE A++F I GW+WWR ++LPGIFPYYVTGAITA Sbjct: 78 PLIVLGTQWYILFNVIAGASAYPNDFKEAATNFRIRGWQWWRQVMLPGIFPYYVTGAITA 137 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GGAWNASIVSE WG H+ GLGAYIA+ T G +P+++LG+ +M FV NR L Sbjct: 138 SGGAWNASIVSEAVQWGDTHVVAHGLGAYIAQMTTNGDYPKIILGIAMMSLFVTLFNRLL 197 Query: 574 WHPLYLYGTRCLRL 587 W P+Y Y LRL Sbjct: 198 WRPMYAYAENKLRL 211 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ P D +E + +FR+ GWQ + + +P P V + + G W Sbjct: 86 WYILFNVIAGASAYPNDFKEAATNFRIRGWQWWRQVMLPGIFPYYVTGAITASGGAWNAS 145 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE + GDT + G+G+YIA D I+ + M + L+++LL+RPM ++ Sbjct: 146 IVSEAVQWGDTHVVAHGLGAYIAQMTTNGDYPKIILGIAMMSLFVTLFNRLLWRPMYAYA 205 Query: 268 -NKFRLE 273 NK RL+ Sbjct: 206 ENKLRLD 212 >gi|167909681|ref|ZP_02496772.1| putative transmembrane transporter [Burkholderia pseudomallei 112] Length = 266 Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 2/239 (0%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 C V GIA + ++ D+ V G +T+ RV+VLI +A+++W+P G+ I Sbjct: 29 LCSAAAVYAGIAL--LRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLI 86 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS LMI GTQWYILFNV Sbjct: 87 GLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWLSPLMILGTQWYILFNV 146 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 IAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAITA GGAWNASIVSE+ Sbjct: 147 IAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVV 206 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 WGH L GLGAY+A +T GS+P + LGV M V+A+NR +W PLY + R RL Sbjct: 207 WGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 265 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGLVWNMMMSMSGGWF 205 W + F++ P DL+E + S R+ W+ V P +P V + + G W Sbjct: 140 WYILFNVIAGASAFPDDLKEAAASLRVR--TPTWWREVMLPGILPYYVTGAITASGGAWN 197 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ Sbjct: 198 ASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYA 257 Query: 266 WSNK 269 ++ + Sbjct: 258 FAER 261 >gi|167718236|ref|ZP_02401472.1| putative transmembrane transporter [Burkholderia pseudomallei DM98] Length = 277 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 2/239 (0%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 C V GIA + ++ D+ V G +T+ RV+VLI +A+++W+P G+ I Sbjct: 40 LCSAAAVYAGIAL--LRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLI 97 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS LMI GTQWYILFNV Sbjct: 98 GLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWLSPLMILGTQWYILFNV 157 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 IAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAITA GGAWNASIVSE+ Sbjct: 158 IAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVV 217 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 WGH L GLGAY+A +T GS+P + LGV M V+A+NR +W PLY + R RL Sbjct: 218 WGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 276 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGLVWNMMMSMSGGWF 205 W + F++ P DL+E + S R+ W+ V P +P V + + G W Sbjct: 151 WYILFNVIAGASAFPDDLKEAAASLRVR--TPTWWREVMLPGILPYYVTGAITASGGAWN 208 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ Sbjct: 209 ASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLYA 268 Query: 266 WSNK 269 ++ + Sbjct: 269 FAER 272 >gi|167737268|ref|ZP_02410042.1| putative transmembrane transporter [Burkholderia pseudomallei 14] Length = 261 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 2/239 (0%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 C V GIA + ++ D+ V G +T+ RV+VLI +A+++W+P G+ I Sbjct: 24 LCSAAAVYAGIA--LLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLI 81 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS LMI GTQWYILFNV Sbjct: 82 GLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAIWLSPLMILGTQWYILFNV 141 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 IAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAITA GGAWNASIVSE+ Sbjct: 142 IAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVV 201 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 WGH L GLGAY+A +T GS+P + LGV M V+A+NR +W PLY + R RL Sbjct: 202 WGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 260 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGLVWNMMMSMSGGWF 205 W + F++ P DL+E + S R+ W+ V P +P V + + G W Sbjct: 135 WYILFNVIAGASAFPDDLKEAAASLRVR--TPTWWREVMLPGILPYYVTGAITASGGAWN 192 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ Sbjct: 193 ASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYA 252 Query: 266 WSNK 269 ++ + Sbjct: 253 FAER 256 >gi|167844449|ref|ZP_02469957.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] Length = 243 Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/239 (52%), Positives = 159/239 (66%), Gaps = 2/239 (0%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 C V GIA + ++ D+ V G +T+ RV+VLI +A+++W+P G+ I Sbjct: 6 LCSAAAVYAGIA--LLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLI 63 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS LMI GTQWYILFNV Sbjct: 64 GLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWLSPLMILGTQWYILFNV 123 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 IAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAITA GGAWNASIVSE+ Sbjct: 124 IAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVV 183 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 WGH L GLGAY+A +T GS+P + LGV M V+A+NR +W PLY + R RL Sbjct: 184 WGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 242 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 59/122 (48%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ P DL+E + S R+ + + +P +P V + + G W Sbjct: 117 WYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNAS 176 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ ++ Sbjct: 177 IVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFA 236 Query: 268 NK 269 + Sbjct: 237 ER 238 >gi|167917693|ref|ZP_02504784.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 257 Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/238 (52%), Positives = 159/238 (66%), Gaps = 2/238 (0%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 C V GIA + ++ D+ V G +T+ RV+VLI +A+++W+P G+ IG Sbjct: 21 CSAAAVYAGIA--LLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAGVLIG 78 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS LMI GTQWYILFNVI Sbjct: 79 LRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWLSPLMILGTQWYILFNVI 138 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AGASAFP+D KE A+S + WWR ++LPGI PYYVTGAITA GGAWNASIVSE+ W Sbjct: 139 AGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSELVVW 198 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GH L GLGAY+A +T GS+P + LGV M V+A+NR +W PLY + R RL Sbjct: 199 GHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRSRL 256 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGLVWNMMMSMSGGWF 205 W + F++ P DL+E + S R+ W+ V P +P V + + G W Sbjct: 131 WYILFNVIAGASAFPDDLKEAAASLRVR--TPTWWREVMLPGILPYYVTGAITASGGAWN 188 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ Sbjct: 189 ASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLYA 248 Query: 266 WSNK 269 ++ + Sbjct: 249 FAER 252 >gi|124516267|gb|EAY57775.1| putative binding-protein-dependent transport systems inner membrane component [Leptospirillum rubarum] Length = 577 Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 171/543 (31%), Positives = 283/543 (52%), Gaps = 41/543 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D+ SLP +R+ LR+ +A ISL+F +VY L A +R +L+P+LDI+QSIP+LGF Sbjct: 44 DLASLPGDLARSVLRLFAAYFISLVFAYVYGLLTALTRWGEKILLPLLDILQSIPVLGFF 103 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + ++L+ + G ELA++ I TS WNM F++++S+ P + +E+ + G Sbjct: 104 PAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTAPVEYKELLDGMQAPG 163 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W + Y VP ++P +V+N ++S + GW+F++A EMI +G L G+GS++ ++ Sbjct: 164 WLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYRLRGLGSFLVVSTSSG 223 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA----------DSWVL 286 +L L ++ ++ + L D LFRP++VWS +F ++++ + +S VL Sbjct: 224 KILDALAGIVLLVVTVVLMDFFLFRPVVVWSQRFSIDQSASLAGETRSVFREWLMESDVL 283 Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346 L R+ LS+++ L + FP+ F + I Sbjct: 284 ALPRRL----------------LSSSLTAGRAGLYALLRRFPKTF----PAGPDGHGRGI 323 Query: 347 F-WFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVIWLG--------CITMFRVVVLIII 396 F W V G+A +GY V V W G +M R++ ++ Sbjct: 324 FRWVSPVLGMASLFLLSILGYSGVESMKRALASGVPWDGLSELPLDMVYSMLRLLAGYLL 383 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 + +PV ++ P + + P AQ++A+ PA FP ++ V + NL LL+ Sbjct: 384 SLCWTVPVAWYVFVHPRLMRTVMPVAQVMASVPATALFPFIIVLVVRTTHSMNLASILLL 443 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G QWY+LFN++AGA FPN+ +E A + + G + R I LP +FP VTG+ITA GG Sbjct: 444 LSGMQWYLLFNLLAGAGTFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGG 503 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWH 575 WNA IVSE + + G+GA++ + T G+ +V+ +L++ V+ LNRF W Sbjct: 504 GWNALIVSEYVVYDQKNYSVRGIGAFLDKVTYGSGNEILIVVSLLMLTVVVVTLNRFFWT 563 Query: 576 PLY 578 PLY Sbjct: 564 PLY 566 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 4/168 (2%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNP----NLWLSLLMIFGTQWYILFNVIAGASAF 475 P +L + P FFP V+ + + NP L +L+ W + F V Sbjct: 89 PLLDILQSIPVLGFFPAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTA 148 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P ++KE+ GW Y ++P P V +I + W I E+ S G +H R Sbjct: 149 PVEYKELLDGMQAPGWLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYR 208 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 GLG+++ ST G + + G++++ V+ ++ FL+ P+ ++ R Sbjct: 209 LRGLGSFLVVSTSSGKILDALAGIVLLVVTVVLMDFFLFRPVVVWSQR 256 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/227 (21%), Positives = 96/227 (42%), Gaps = 13/227 (5%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 + LP + LR+L+ ++SL +T A RL ++P+ +M S+P Sbjct: 363 LSELPLDMVYSMLRLLAGYLLSLCWTVPVAWYVFVHPRLMRTVMPVAQVMASVPATALFP 422 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 F +V + LA+I + + W + F++ P +L E + + + G Sbjct: 423 FIIVLVVR----TTHSMNLASILLLLSGMQWYLLFNLLAGAGTFPNELREAALTMGVRGR 478 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQ 236 + +PF P +V + + GGW ++ SE +V + GIG+++ + Sbjct: 479 LFLRKIFLPFLFPSIVTGSITAFGGGWNALIVSEYVVYDQKNYSVRGIGAFLDKVTYGSG 538 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283 + + I+ ++L + V+ ++ + P+ ER T Y D Sbjct: 539 NEILIVVSLLMLTVVVVTLNRFFWTPLY--------ERVTSRYGLDG 577 >gi|148658632|ref|YP_001278837.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] gi|148570742|gb|ABQ92887.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] Length = 670 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 145/282 (51%), Positives = 196/282 (69%), Gaps = 3/282 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 DL+ LVI I +L Q + P D + ++L+ +LP Y RT RM A+++S Sbjct: 21 DLVVVPLVIVAILLLTVAFQGASQPFDETTPDLTVSLNPANLPYYGLRTVFRMFLAVLLS 80 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 LLFTF ATLAAKSRR +V++P LD +QS+PILGFLT T F+ ++ G ++G E A+I Sbjct: 81 LLFTFTVATLAAKSRRAEIVIIPALDFLQSLPILGFLTVTTAIFLGMFRGSLLGLEAASI 140 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 FAIFTSQVWNM FS Y SL PR+L+E + RLS W+KFW L VPF+MPGL+WN MMS Sbjct: 141 FAIFTSQVWNMAFSFYHSLITTPRELQEAAAVLRLSPWKKFWKLEVPFAMPGLIWNTMMS 200 Query: 200 MSGGWFFVVASEMI-VVG-DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SGGWFFVVASE+I VVG D LPG+GSY+ LAI++ D+ A++YA LT+L +I +YDQ Sbjct: 201 VSGGWFFVVASEVISVVGRDNDQYLPGVGSYVGLAIEQADVAAMVYAGLTLLIIILIYDQ 260 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299 L+FRP++ WS KF+ E++ A SW+L L +++ +G Sbjct: 261 LIFRPIVAWSEKFKFEQSEAQEVAQSWMLRLLQRSGIASSLG 302 Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 117/255 (45%), Positives = 152/255 (59%), Gaps = 11/255 (4%) Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 ++ ++RV D+ C V G ++ +VL +WLG +T RVV+ Sbjct: 426 EVLRDERVGAPGDLAAACATPMVPAG-----------KVSWSEVLECLWLGLLTTMRVVI 474 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 I I++++W P+G+WIG RP ++ +QP AQ AAFPAN+ FP+ V ++ Y L NL+ Sbjct: 475 WIGISTLVWTPIGVWIGLRPRVAQFVQPLAQFAAAFPANLLFPIAVVLIATYALPQNLFQ 534 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 + LMI G QWYILFNVIAG + PND KE A + GW WWR +I+P IFP +VTG IT Sbjct: 535 APLMILGAQWYILFNVIAGTISIPNDLKEAARVLGLRGWAWWRKLIIPAIFPAFVTGGIT 594 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GG+WNASIVSEV SWG L TGLGAYIA + P V LG+L+M VL NR Sbjct: 595 ASGGSWNASIVSEVVSWGATTLTLTGLGAYIAYWSTGEFNPHVGLGMLVMGLLVLGFNRL 654 Query: 573 LWHPLYLYGTRCLRL 587 W LY RL Sbjct: 655 FWRRLYALAETRFRL 669 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ +IP DL+E +R L GW + L +P P V + + G W Sbjct: 544 WYILFNVIAGTISIPNDLKEAARVLGLRGWAWWRKLIIPAIFPAFVTGGITASGGSWNAS 603 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE++ G T + L G+G+YIA + + ML M ++ +++L +R + + Sbjct: 604 IVSEVVSWGATTLTLTGLGAYIAYWSTGEFNPHVGLGMLVMGLLVLGFNRLFWRRLYALA 663 Query: 268 N-KFRLE 273 +FRL+ Sbjct: 664 ETRFRLD 670 >gi|308180844|ref|YP_003924972.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046335|gb|ADN98878.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 454 Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 150/472 (31%), Positives = 256/472 (54%), Gaps = 34/472 (7%) Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 M L+P V+G E AIF +FT+Q WN+ ++YQSL P DL V++ F + WQ+FW L Sbjct: 1 MGLFPNNVLGVEAVAIFGVFTAQAWNIMLALYQSLRVTPEDLMTVAKQFGCNSWQRFWRL 60 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASE---MIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 ++ P ++WN+++S S WF +VA E ++V + + LPGIGSYI +A+ + A Sbjct: 61 EFLYATPSILWNIVISQSAAWFALVACEQATIVVPKNETLVLPGIGSYIQIALDTANFGA 120 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY-PADSWV--LYLFRKTNFL-- 295 ++ A++ ++ + L + +F+P+I + ++ +T P S V L + K L Sbjct: 121 VINAVIALVICVLLVNVFIFQPLIKGTAHYKYGTSTDSQLPQQSQVYDLMVMAKVPLLVK 180 Query: 296 ---RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 R I Y W + +P K + LG R +++ V + + +W + Sbjct: 181 RLHRHIRY-WWLYGAP------KQWQKLGFSR------IIRILKKYTVYWRIA-WWLVIA 226 Query: 353 CGV-AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 G+ +G+ ++ + + ++ + +T RV++ ++++++I+IP+ +W+ Sbjct: 227 VGLYRLGV------LLIKYLDWINLSVLFKWTFLTTSRVLIAVLLSALIFIPLAVWVASN 280 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 IQP Q+L + PA+++ P+V ++ + W+ L++ GTQWY FN+IAG Sbjct: 281 ARRLKLIQPVGQVLGSIPADIYIPIVALMITLTGTTQHWWVIPLIMTGTQWYFFFNIIAG 340 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D K+V + FH++GWRWW + ++P +FP ++T I A G AWNA I +E+ SWG Sbjct: 341 YLAIPSDIKDVVNIFHLSGWRWWTHFLIPSLFPSFITAIINAAGAAWNADIAAELISWGT 400 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 TGLGAYIA++ P GVLI+C V +W PLY + R Sbjct: 401 HQYAVTGLGAYIAQNINNK--PAEATGVLIICVIVGLCVVLIWQPLYRFAER 450 >gi|206603108|gb|EDZ39588.1| Putative transmembrane transporter [Leptospirillum sp. Group II '5-way CG'] Length = 577 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 170/543 (31%), Positives = 286/543 (52%), Gaps = 41/543 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D+ SLP +R+ LR+ +A +SL+F +VY L A +R +L+P+LDI+QSIP+LGF Sbjct: 44 DLASLPGDLARSVLRLFAAYFLSLVFAYVYGLLTALTRWGEKILLPLLDILQSIPVLGFF 103 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + ++L+ + G ELA++ I TS WNM F++++S+ P + +E+ + G Sbjct: 104 PAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTAPVEYKELLDGMQAPG 163 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W + Y VP ++P +V+N ++S + GW+F++A EMI +G L G+GS++ ++ Sbjct: 164 WLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYQLRGLGSFLVVSTSSG 223 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA------------DSW 284 +L L ++ ++ + L D LFRP++VWS +F ++++ PA +S Sbjct: 224 KILDALAGIVLLVVTVVLMDFFLFRPIVVWSQRFSIDQSAS--PAGETRSIFREWLMESN 281 Query: 285 VLYLFRK--TNFLRFIGYSSWNFFS--PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340 L L R+ ++ L S + F P++ GV R+ P L + S Sbjct: 282 ALALSRRVLSSLLEAAMASLYAFLRRLPIAFPPGPDGNGRGVFRWVSP--VLGVSS---- 335 Query: 341 SYMLDIFWFCVVC----GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396 ++L I + V +A G+ W + + Y +M R++ + Sbjct: 336 LFLLGILAYSGVESMKRALASGVPWDGLSELPLDMVY------------SMLRLLAGYFL 383 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 + +PV ++ P + + P AQ++A+ PA FP ++ V + NL LL+ Sbjct: 384 SLCWTVPVAWYVFVHPRLMRTVMPVAQVMASVPATALFPFIIVLVVRTTHSMNLASILLL 443 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G QWY+LFN++AGA FPN+ +E A + + G + R I LP +FP VTG+ITA GG Sbjct: 444 LSGMQWYLLFNLLAGAGTFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGG 503 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWH 575 WNA IVSE + + G+GA++ T G+ +V+ +L++ V+ LNRF W Sbjct: 504 GWNALIVSEYVVYDQKNYSVRGIGAFLDRVTYGSGNEILIVVSLLMLTVVVVTLNRFFWT 563 Query: 576 PLY 578 PLY Sbjct: 564 PLY 566 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 4/168 (2%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNP----NLWLSLLMIFGTQWYILFNVIAGASAF 475 P +L + P FFP V+ + + NP L +L+ W + F V Sbjct: 89 PLLDILQSIPVLGFFPAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTA 148 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P ++KE+ GW Y ++P P V +I + W I E+ S G +H + Sbjct: 149 PVEYKELLDGMQAPGWLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYQ 208 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 GLG+++ ST G + + G++++ V+ ++ FL+ P+ ++ R Sbjct: 209 LRGLGSFLVVSTSSGKILDALAGIVLLVVTVVLMDFFLFRPIVVWSQR 256 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 9/206 (4%) Query: 28 VIGIINILLHGIQE----TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 V+G+ ++ L GI ++ R + VP + LP + LR+L+ +SL +T Sbjct: 330 VLGVSSLFLLGILAYSGVESMKRALASGVPWD-GLSELPLDMVYSMLRLLAGYFLSLCWT 388 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 A RL ++P+ +M S+P F +V + LA+I + Sbjct: 389 VPVAWYVFVHPRLMRTVMPVAQVMASVPATALFPFIIVLVVR----TTHSMNLASILLLL 444 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + W + F++ P +L E + + + G + +PF P +V + + GG Sbjct: 445 SGMQWYLLFNLLAGAGTFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGGG 504 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYI 229 W ++ SE +V + GIG+++ Sbjct: 505 WNALIVSEYVVYDQKNYSVRGIGAFL 530 >gi|170290357|ref|YP_001737173.1| binding-protein-dependent transport systems inner membrane component [Candidatus Korarchaeum cryptofilum OPF8] gi|170174437|gb|ACB07490.1| binding-protein-dependent transport systems inner membrane component [Candidatus Korarchaeum cryptofilum OPF8] Length = 541 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 183/541 (33%), Positives = 297/541 (54%), Gaps = 39/541 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA + LRM+ A + SL+F+ LAAK+ + +++P+LD++QS+PIL FL + Sbjct: 18 LPVYALLSLLRMIIAYLFSLIFSLSIGILAAKNEKAEHIIIPLLDVLQSVPILSFLPIAI 77 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++F+NL+ G IGAE+++IF IFTSQVWNMTF +Y+++ IPRDLEE+ R +R+ KF Sbjct: 78 IFFINLF-GPYIGAEISSIFLIFTSQVWNMTFGVYEAVKLIPRDLEEMVRVYRIG---KF 133 Query: 181 WYLG---VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 YL +P +M L++N MS GGWFF+ ASE+I +G+ IPLPGIGS +AL++ E Sbjct: 134 LYLRKILLPATMTKLIYNSAMSWGGGWFFLYASEIISLGNAQIPLPGIGSLLALSLAESP 193 Query: 238 ---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294 +AIL ++TM V F Y ++RP++ WS F+ E + G + RK F Sbjct: 194 PRIDIAILSVLITMFLVSFTY-LFIWRPLMEWSENFKYEYSAG---------EIKRKRVF 243 Query: 295 ----LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350 +R + +FF L ++ R F E + ++ +++L I + Sbjct: 244 EIPRVRIPPFLYRSFFRSLRYILRLPIRNYVAGFVSFVERRAGII--KKGTFLLLILF-- 299 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW-IPVGIWIG 409 + A+ IA I + Y +I + + R V+ +++ S+ W IPV + +G Sbjct: 300 -IAYSAMKIA-PHITLEMPSSEYMGEPDLILIASLNSIRRVLTVLLISLSWTIPVSLLVG 357 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM--IFGTQWYILFN 467 H + F ++ A+FP V +P +V + + ++ +M +FG Q+Y+LFN Sbjct: 358 RGRHWDEFMLLF-EIAASFPIPVLWPFLVKYIVLPLGDEGFEIAAIMLALFGAQFYVLFN 416 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 +AG + +D +E+ F I G + R +++PG+FP VTG ITA GGAWN+ IV+E Sbjct: 417 SLAGVKSISSDLEEMRKVFLIRGSLYLRKLVIPGMFPSIVTGLITAWGGAWNSLIVAEYI 476 Query: 528 SWGHIHLRTT----GLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582 G+ + GLG ++ + ++G V+ ++ V+ +NR W LY Y Sbjct: 477 KVGNEVFPSKRAQYGLGTLLSIAAWDRGDISSVIFITAVLTLIVITVNRAFWRFLYDYSA 536 Query: 583 R 583 + Sbjct: 537 K 537 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 10/209 (4%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L+ ++ISL +T + L + R ++ + +I S PI F V Y + P Sbjct: 337 RVLTVLLISLSWTIPVSLLVGRGRHWDEFML-LFEIAASFPIPVLWPFLVKYIV--LPLG 393 Query: 131 VIGAELAAI-FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 G E+AAI A+F +Q + + F+ + +I DLEE+ + F + G L +P Sbjct: 394 DEGFEIAAIMLALFGAQFY-VLFNSLAGVKSISSDLEEMRKVFLIRGSLYLRKLVIPGMF 452 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP----GIGSYIALAIKEQ-DLLAILYA 244 P +V ++ + G W ++ +E I VG+ V P G+G+ +++A ++ D+ ++++ Sbjct: 453 PSIVTGLITAWGGAWNSLIVAEYIKVGNEVFPSKRAQYGLGTLLSIAAWDRGDISSVIFI 512 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 + ++ ++ +R + +S KFR+E Sbjct: 513 TAVLTLIVITVNRAFWRFLYDYSAKFRVE 541 >gi|297567837|ref|YP_003686808.1| hypothetical protein Mesil_3497 [Meiothermus silvanus DSM 9946] gi|296852286|gb|ADH65300.1| hypothetical protein Mesil_3497 [Meiothermus silvanus DSM 9946] Length = 671 Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 150/303 (49%), Positives = 200/303 (66%), Gaps = 18/303 (5%) Query: 13 RRIFPNI--------FDLLAFVLVIGIINIL------LHGIQETTVPRDIVDIVPITLDV 58 RR+FP+ F V++ G++ +L L G E P + ++LD Sbjct: 2 RRVFPSPEALRPRAPFSRWDLVVIPGVLVLLALFTLALQGATEPFGPTS--PNLTVSLDP 59 Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 LP Y RT LRML+A+++SL+FTFVYAT+AAK R VL+PILD +QS+PILGFLT Sbjct: 60 AHLPYYGLRTLLRMLAALLLSLVFTFVYATVAAKVPRTERVLIPILDFLQSLPILGFLTA 119 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 T F+ L+ G + G E A+IFAIFTSQVWNMTFS Y SL +P++L+E + RLS WQ Sbjct: 120 TTSIFLGLFRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPKELQEAAAMLRLSPWQ 179 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI-VVG-DTVIPLPGIGSYIALAIKEQ 236 +FW L VPF++P LVWN MMS+SGGWFFVVASE I VVG D LPG+GSYIALAI++ Sbjct: 180 RFWKLEVPFALPHLVWNAMMSVSGGWFFVVASEAINVVGRDQTQYLPGVGSYIALAIQQA 239 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296 + A+LYA +T+ ++ LYDQL FRP++ W+ KF+ E++ A SWVL L ++ + Sbjct: 240 NTHAMLYAGVTLFLLVLLYDQLFFRPIVAWAEKFKFEQSESSDTAQSWVLTLLKRARLSQ 299 Query: 297 FIG 299 I Sbjct: 300 RIA 302 Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 141/220 (64%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 ++ +V V+ G T RV +++ +++W+PVG++IG RP ++ QP AQ AA Sbjct: 451 AGKVSWPEVPEVLKYGLFTALRVSFFVLLVTLVWLPVGVYIGLRPRLTQWAQPLAQFGAA 510 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FPL V ++++ LNP +W+S LM+ G QWYILFNVIAG A PND KE A + Sbjct: 511 FPANLLFPLFVVTIAHFRLNPEIWVSPLMVLGGQWYILFNVIAGTVAIPNDLKEAARMYR 570 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + GW WR ++LP IFP +VTG ITA GG+WNASIV+EV WG+ L TGLGAYIA + Sbjct: 571 LRGWGLWRRLLLPAIFPAFVTGGITATGGSWNASIVAEVVRWGNTTLVATGLGAYIARWS 630 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P V LG+L+M VLA NR +W LY RL Sbjct: 631 TGEFNPHVGLGMLVMGLLVLAYNRLIWRRLYQLAEERYRL 670 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ IP DL+E +R +RL GW + L +P P V + + G W Sbjct: 545 WYILFNVIAGTVAIPNDLKEAARMYRLRGWGLWRRLLLPAIFPAFVTGGITATGGSWNAS 604 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI-VW 266 + +E++ G+T + G+G+YIA + + ML M ++ Y++L++R + + Sbjct: 605 IVAEVVRWGNTTLVATGLGAYIARWSTGEFNPHVGLGMLVMGLLVLAYNRLIWRRLYQLA 664 Query: 267 SNKFRLE 273 ++RL+ Sbjct: 665 EERYRLD 671 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/135 (22%), Positives = 65/135 (48%), Gaps = 5/135 (3%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGW-RWWRYIILPGIFPYYVTGA 510 S+ IF +Q W + F+ A P + +E A+ ++ W R+W+ + +P P+ V A Sbjct: 139 SIFAIFTSQVWNMTFSFYASLRTVPKELQEAAAMLRLSPWQRFWK-LEVPFALPHLVWNA 197 Query: 511 ITACGGAWNASIVSEVASW-GHIHLR-TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 + + G W + SE + G + G+G+YIA + ++ + ++ + + VL Sbjct: 198 MMSVSGGWFFVVASEAINVVGRDQTQYLPGVGSYIALAIQQANTHAMLYAGVTLFLLVLL 257 Query: 569 LNRFLWHPLYLYGTR 583 ++ + P+ + + Sbjct: 258 YDQLFFRPIVAWAEK 272 >gi|251772337|gb|EES52905.1| probable binding-protein-dependent transport systems inner membrane component [Leptospirillum ferrodiazotrophum] Length = 571 Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 170/537 (31%), Positives = 275/537 (51%), Gaps = 35/537 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D+ LP + +R+ A ++SL F + Y AA +R +L+P+LDI+QSIP+LGF Sbjct: 44 DLRDLPGDILHSLVRLFLAYLLSLSFAYAYGLAAALTRLGPRLLIPVLDILQSIPVLGFF 103 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 V+ + L+P +G E A+I I TS WNM F++Y+S+ P +L ++ R R Sbjct: 104 PAVVLVMVPLFPTTHMGVEAASIVLIATSMAWNMAFAVYESVRTAPPELTDLFRGIRAPA 163 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W VP ++P +V+N ++S + GW+F++A EMI +G LPG+GS++ + ++ Sbjct: 164 WLWALRFLVPVTLPKVVYNSVLSWTAGWYFLIACEMIALGPVHYELPGLGSFLVGSTEKG 223 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR 296 L + ++ + + D L+FRP + WS+ FRL P S +Y Sbjct: 224 HFGEALLGIGALVVTVMILDLLVFRPFLAWSHNFRLGEVESHTPRISSPVY--------D 275 Query: 297 FIGYSSW--NFFSPLSNNVKKLCRTLGVI-----RFHFPENFLQLCSNQRVSYMLDIFWF 349 + SSW F S +S+ R + + F L + +F Sbjct: 276 LLAGSSWLGQFRSSVSDMAAGFFRRISRVPRRRQTFRDSSALRLLGLLLLGFFGGYLFTE 335 Query: 350 CVVCGVAI-------GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 + GV + GI W+S+ + D+LY + R+VV +++ + + Sbjct: 336 SLYAGVRVVTGWINQGIPWRSLAELP-----ADLLY-------SSLRLVVAYLLSLLWTL 383 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 PV W+ P +S + P A+++A+ PA FP V+ V + + NL LL++ G QW Sbjct: 384 PVAYWVFRTPRLSRIVFPLAEIMASVPATALFPFVIVLVVTHLHSMNLASILLLMSGMQW 443 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 Y+LFN+++G FP + +EV+ +F I + R + LP + P VTG+ITA GG WNA I Sbjct: 444 YLLFNLLSGVGTFPAELREVSLTFGIRQGLFIRKVFLPFLLPSLVTGSITAFGGGWNALI 503 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPE-VVLGVLIMCCFVLALNRFLWHPLY 578 VSE + GLGA++ +T +G+ P +V +L+M V+A NRF W PLY Sbjct: 504 VSEYVVYAKKDYGVDGLGAFLDRATYQGAHPVLIVAALLVMTAAVVAANRFFWIPLY 560 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 13/225 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 LP ++LR++ A ++SLL+T A ++ RL ++ P+ +IM S+P F Sbjct: 359 ELPADLLYSSLRLVVAYLLSLLWTLPVAYWVFRTPRLSRIVFPLAEIMASVPATALFPFV 418 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +V + + LA+I + + W + F++ + P +L EVS +F + Sbjct: 419 IVLVVT----HLHSMNLASILLLMSGMQWYLLFNLLSGVGTFPAELREVSLTFGIRQGLF 474 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI-KEQDL 238 + +PF +P LV + + GGW ++ SE +V + G+G+++ A + Sbjct: 475 IRKVFLPFLLPSLVTGSITAFGGGWNALIVSEYVVYAKKDYGVDGLGAFLDRATYQGAHP 534 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283 + I+ A+L M + ++ + P+ ER T Y D+ Sbjct: 535 VLIVAALLVMTAAVVAANRFFWIPLY--------ERVTQRYSYDA 571 >gi|291295407|ref|YP_003506805.1| binding-protein-dependent transport systems inner membrane component [Meiothermus ruber DSM 1279] gi|290470366|gb|ADD27785.1| binding-protein-dependent transport systems inner membrane component [Meiothermus ruber DSM 1279] Length = 671 Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 138/248 (55%), Positives = 180/248 (72%), Gaps = 2/248 (0%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 ++L+ LP Y RT LRML+A+++SL FT VYAT+AAK R VL+P+LD +QS+PIL Sbjct: 55 VSLNPAHLPYYGLRTLLRMLAALLLSLAFTLVYATIAAKVPRTERVLIPLLDFLQSLPIL 114 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GFLT T F+ L+ G + G E A+IFAIFTSQVWNMTFS Y SL +PR+L+E + R Sbjct: 115 GFLTATTAIFLGLFRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPRELQEAAAMLR 174 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI-VVG-DTVIPLPGIGSYIAL 231 LS WQ+FW L VPF +P LVWN MMS+SGGWFFVVASE+I VVG D LPG+G+YIAL Sbjct: 175 LSPWQRFWKLEVPFGLPNLVWNAMMSVSGGWFFVVASEVISVVGRDQDQYLPGVGAYIAL 234 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 AI++ D A+L+A LT+ ++ LYDQLLFRP++ W+ KF+ E++ A SWVL L ++ Sbjct: 235 AIQQADAQAMLWAGLTLFLLVLLYDQLLFRPVVAWAEKFKFEQSESSDTAQSWVLTLLQR 294 Query: 292 TNFLRFIG 299 F + I Sbjct: 295 ARFSQRIA 302 Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 107/220 (48%), Positives = 143/220 (65%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + +VL V LG T RV +++ ++IW+P+G+++G RP ++ +QP AQ AA Sbjct: 451 AGKVAWPEVLEVFKLGFFTALRVTFFVLLVTLIWLPIGVYVGLRPRLTQWVQPLAQFGAA 510 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FPL V ++++ LNP +W+S LM+ G QWYILFN IAG++A PND KE A + Sbjct: 511 FPANLLFPLFVVAIAHFRLNPEIWVSPLMVLGGQWYILFNAIAGSAAIPNDLKEAARLYG 570 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + GW WR +ILP IFP +VTG ITA GG+WNASIV+EV WG L TGLGAYIA + Sbjct: 571 LRGWNRWRRLILPAIFPAFVTGGITATGGSWNASIVAEVVQWGDTTLVATGLGAYIARWS 630 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P V LG+L+M +VLA NR +W LY RL Sbjct: 631 TGEFNPHVGLGMLVMGLWVLAYNRLIWQRLYQLAEERYRL 670 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F+ IP DL+E +R + L GW ++ L +P P V + + G W Sbjct: 545 WYILFNAIAGSAAIPNDLKEAARLYGLRGWNRWRRLILPAIFPAFVTGGITATGGSWNAS 604 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI-VW 266 + +E++ GDT + G+G+YIA + + ML M + Y++L+++ + + Sbjct: 605 IVAEVVQWGDTTLVATGLGAYIARWSTGEFNPHVGLGMLVMGLWVLAYNRLIWQRLYQLA 664 Query: 267 SNKFRLE 273 ++RL+ Sbjct: 665 EERYRLD 671 >gi|224456411|ref|ZP_03664884.1| ABC transporter permease family protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 330 Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 180/291 (61%), Gaps = 6/291 (2%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTL 70 +R PN D++ L++ + + + + D + I+LD LP Y RTT+ Sbjct: 9 KKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTM 68 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P Sbjct: 69 RLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHS 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+P Sbjct: 129 IMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAMLT 247 GL+WN+M+S S WF + ASE I + GD + LPGIGSYIAL + + +++AI YA++ Sbjct: 189 GLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPGIGSYIALGLTDSNIIAIFFYALVA 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298 ++ I L+DQLLFRP++ WS KF+ E + W+ ++K+ + I Sbjct: 247 IIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAI 297 >gi|167010888|ref|ZP_02275819.1| ABC transporter permease protein [Francisella tularensis subsp. holarctica FSC200] gi|254366877|ref|ZP_04982915.1| ABC transporter, permease protein [Francisella tularensis subsp. holarctica 257] gi|134252705|gb|EBA51799.1| ABC transporter, permease protein [Francisella tularensis subsp. holarctica 257] Length = 396 Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 105/255 (41%), Positives = 165/255 (64%), Gaps = 5/255 (1%) Query: 47 DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 D + I+LD LP Y RTT+R++ M+ SL+F + AK++ V +PI++ Sbjct: 27 DASSVSAISLDPSHLPYYMLRTTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINF 86 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 ++S P+LGFLTFT +F+ L+P ++G E AAIF IFTSQ WN+ +YQ++ +P +L Sbjct: 87 LESAPLLGFLTFTTAFFIFLFPHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELT 146 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPG 224 E +F+L+ WQ+FW + +P+S+PGL+WN+M+S S WF + ASE I + GD + LPG Sbjct: 147 EAVTAFKLNAWQRFWKIELPYSVPGLLWNIMVSQSAAWFAITASEAIPTITGD--VSLPG 204 Query: 225 IGSYIALAIKEQDLLAI-LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS 283 IGSYIAL + + +++AI YA++ ++ I L+DQLLFRP++ WS KF+ E + Sbjct: 205 IGSYIALGLTDSNIIAIFFYALVAIIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNP 264 Query: 284 WVLYLFRKTNFLRFI 298 W+ ++K+ + I Sbjct: 265 WLYRSYKKSQLVNAI 279 >gi|325519249|gb|EGC98700.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 187 Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 105/170 (61%), Positives = 133/170 (78%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+PG+V+G Sbjct: 78 AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 187 >gi|315427282|dbj|BAJ48894.1| sulfonate/nitrate/taurine ABC transporter permease [Candidatus Caldiarchaeum subterraneum] Length = 517 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 162/523 (30%), Positives = 254/523 (48%), Gaps = 48/523 (9%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LRM +A+++S+LF+ V T A ++ V VP+LDI+QSIPILGF + F P Sbjct: 19 LRMAAALIVSVLFSIVVGTAAGVNKSFEKVAVPVLDILQSIPILGFFPVAIQVFYAASP- 77 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 V GAELAAIF IFTSQVWN+TF++Y+S I +L +V+ S R+S +++F ++ +P + Sbjct: 78 -VFGAELAAIFLIFTSQVWNITFAVYESTRFIQPELLDVANSMRMSAFERFRHIYLPACL 136 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P +V N S + G FF+V +E++ GD + L G+G+ ++ DLL I+ +L ++ Sbjct: 137 PRIVRNFQPSWANGMFFIVGAEILAFGDVELKLFGVGTLVSEFAVAGDLLGIITVLLVLV 196 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK---TNFLRFIGYSSWNFF 306 + + L+F P+ F T G P + F K F + +FF Sbjct: 197 AATIMVNFLVFIPL---GTMF---ETAGPPPPGLLRRFAFIKKLAKPFQTTLATPVISFF 250 Query: 307 ------SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 S L N V L + + F FL + R + G Sbjct: 251 EYQRSVSGLVNRVSVLGSLVRNLIFLILIGFLATLAITRGNEFF-------------GSL 297 Query: 361 WQSIGYI-VNHFTYQDVL-YVIWLGCITMFRVVVLIIIASIIW-IPVGIWIGFRPHISSK 417 +Q++G + V++ V +V +G + S+ W IP + I RP +S+ Sbjct: 298 YQTLGRVGVDNLLSSAVFSFVRVMGAVGF----------SVAWSIPAAVAIARRPQLSTA 347 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + Q++A+ P + +PL + P L ++++ TQWY+ F V+AG P Sbjct: 348 VTTVFQVVASIPVTIVYPLFAETLKD---QPELRAFVMILAATQWYVFFQVLAGLKNIPR 404 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 EVA + W R + LP P +TG ITA GGAWN +V+E G + T Sbjct: 405 SELEVADMLQLKTWTRIRMVYLPRALPALITGCITAAGGAWNGLVVAERLVLGDLVAETD 464 Query: 538 --GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 GLG +++ T G V +++M V+ +NRF W LY Sbjct: 465 LPGLGKLLSQLTYAGDLLGSVSVLIVMSSIVVLMNRFFWKKLY 507 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 14/221 (6%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 V +L A + +R++ A+ S+ ++ A A+ +L + + ++ SIP+ Sbjct: 306 VDNLLSSAVFSFVRVMGAVGFSVAWSIPAAVAIARRPQLSTAVTTVFQVVASIPV----- 360 Query: 118 FTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 T+VY F + EL A I + W + F + L NIPR EV+ +L Sbjct: 361 -TIVYPLFAETLKDQ---PELRAFVMILAATQWYVFFQVLAGLKNIPRSELEVADMLQLK 416 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV--IPLPGIGSYIALAI 233 W + + +P ++P L+ + + G W +V +E +V+GD V LPG+G ++ Sbjct: 417 TWTRIRMVYLPRALPALITGCITAAGGAWNGLVVAERLVLGDLVAETDLPGLGKLLSQLT 476 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMI-VWSNKFRLE 273 DLL + ++ M ++ L ++ ++ + + ++K ++E Sbjct: 477 YAGDLLGSVSVLIVMSSIVVLMNRFFWKKLYDLVASKLKIE 517 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 6/197 (3%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R+ +I++ + I VG G P +L + P FFP+ + +Y Sbjct: 16 VSFLRMAAALIVSVLFSIVVGTAAGVNKSFEKVAVPVLDILQSIPILGFFPVAIQV--FY 73 Query: 445 HLNPNLWLSL---LMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 +P L +IF +Q W I F V + +VA+S ++ + +R+I LP Sbjct: 74 AASPVFGAELAAIFLIFTSQVWNITFAVYESTRFIQPELLDVANSMRMSAFERFRHIYLP 133 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P V + + +E+ ++G + L+ G+G ++E G ++ +L Sbjct: 134 ACLPRIVRNFQPSWANGMFFIVGAEILAFGDVELKLFGVGTLVSEFAVAGDLLGIITVLL 193 Query: 561 IMCCFVLALNRFLWHPL 577 ++ + +N ++ PL Sbjct: 194 VLVAATIMVNFLVFIPL 210 >gi|325527631|gb|EGD04934.1| ABC anion transporter, fused inner membrane subunits [Burkholderia sp. TJI49] Length = 186 Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 103/170 (60%), Positives = 132/170 (77%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +T P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIATLQTQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 AELAAIFAIFTSQ WNMTFS YQSL +P DL EVSR F L+GWQ+FW L Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPSDLNEVSRGFHLTGWQRFWKL 186 >gi|119718931|ref|YP_919426.1| binding-protein-dependent transport systems inner membrane component [Thermofilum pendens Hrk 5] gi|119524051|gb|ABL77423.1| binding-protein-dependent transport systems inner membrane component [Thermofilum pendens Hrk 5] Length = 497 Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 141/520 (27%), Positives = 265/520 (50%), Gaps = 48/520 (9%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S + RM A ++SLL V +L A+++ + +++P+LDI+QSIPILGF + F+ Sbjct: 9 SASLARMAEAYIVSLLIALVLGSLMARNKVVESIMLPVLDILQSIPILGFFPAALAMFIA 68 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P + +G E AA+F I TS VWNM F +Y S+ ++ + +++R + L +F+Y+ V Sbjct: 69 NLP-RALGVEAAAVFLIVTSLVWNMIFGVYASIKSLEPSVFDMARVYSLGAVSRFFYIYV 127 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P S L+ N ++S +GGWFF+ A+E+I +G+ L GIG++I + D YA Sbjct: 128 PASRAALLANSLISWAGGWFFLTAAEVITLGEEEYKLTGIGAFIMESYNRGD-----YAS 182 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 +GV L+ ++ +++W+ + R + P+ S F Sbjct: 183 F-YIGVAALFATIMATYVLLWNPAVKSVRDLPL-PSVS--------------------AF 220 Query: 306 FSPLSNNVKKLCRTLGVI------RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 + S V ++ LG R P ++ + +L + F + GVA + Sbjct: 221 YEKFSEVVSRVWSGLGEALVWVEARVKLPGFVPRVVG----ATLLVVALFYLGSGVAGLL 276 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 + +G + F ++ L + + + +F +V+ ++IA + + FR + I Sbjct: 277 SLDVVG-VAKSFLHELPLSLARVSIVLVFSLVLSLLIAYLTY-------SFR-RAAMLIG 327 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPND 478 +LLA+ PA +++PL+ + P + L +++ G+ WY+ FN++ G + + Sbjct: 328 ASGELLASVPAIIWWPLLGYVALTFSWGPLVVLFTVLLQGSLWYLYFNILVFGLGSIRKE 387 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 +E+A+ + + GW ++R I P +FP +TGA+++ GGAWNA+I +E + G + G Sbjct: 388 HEELAAVYGVKGWHFFRSIFFPSVFPSLLTGALSSWGGAWNATIAAEYVTLGQRTIDLGG 447 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +GA + T +G + L L + ++A+++ +W L+ Sbjct: 448 VGALLNRYTVEGEAGKTALAALFLSLVIVAVDKAVWARLF 487 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 52/289 (17%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 LP F+ R + + + F L G+ +L D+V + L H LP + Sbjct: 248 LPGFVPRVVGATLLVVALFYLGSGVAGLL---------SLDVVGVAKSFL--HELPLSLA 296 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP------ILGFLTFT- 119 R ++ ++ ++V+SLL ++ + RR M++ +++ S+P +LG++ T Sbjct: 297 RVSIVLVFSLVLSLLIAYLTYSF----RRAAMLIGASGELLASVPAIIWWPLLGYVALTF 352 Query: 120 -----VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFR 173 VV F L G +W + F++ L +I ++ EE++ + Sbjct: 353 SWGPLVVLFTVLLQG----------------SLWYLYFNILVFGLGSIRKEHEELAAVYG 396 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 + GW F + P P L+ + S G W +A+E + +G I L G+G+ + Sbjct: 397 VKGWHFFRSIFFPSVFPSLLTGALSSWGGAWNATIAAEYVTLGQRTIDLGGVGALLNRYT 456 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD 282 E + A T L +FL ++ VW+ F R +G + + Sbjct: 457 VEGE------AGKTALAALFLSLVIVAVDKAVWARLF--SRLSGKFAGE 497 >gi|116334711|ref|YP_796238.1| ABC-type anion transport system, duplicated permease component [Lactobacillus brevis ATCC 367] gi|116100058|gb|ABJ65207.1| ABC-type anion transport system, duplicated permease component [Lactobacillus brevis ATCC 367] Length = 264 Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 87/240 (36%), Positives = 138/240 (57%), Gaps = 7/240 (2%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 L +++F + C + +G+ IG++ + + + +IW +T RV+ ++++++I+IP Sbjct: 28 LTLWYFSLGCAM-VGL----IGFLATYLKWLNWQTLIWWTLLTTGRVLAAVVLSALIFIP 82 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 + +W+ P ++IQP+ Q++ + PA+V+ P+V + W+ L++ GTQWY Sbjct: 83 LAVWVASNPRRLNRIQPWGQVIGSIPADVYVPVVALLIVATGTTHQWWVIPLIMTGTQWY 142 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 FNVIAG A P D +EV FH+ GWRWW + P +FPY +T I A G AWNA I Sbjct: 143 FFFNVIAGYLAIPADIQEVTQVFHLKGWRWWTRFLFPSLFPYLITAIINAAGAAWNADIA 202 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 +E+ +WG GLGAYIA +T+ P GVLI+C V F+W PLY + R Sbjct: 203 AELITWGTKQFSVAGLGAYIAGNTDNK--PAEATGVLIICGLVGICVIFIWQPLYRFAER 260 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 6/176 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVIS-LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 L+ +L + TT R+L+A+V+S L+F + +A+ RRL + P ++ SIP Sbjct: 53 LNWQTLIWWTLLTTGRVLAAVVLSALIFIPLAVWVASNPRRLNRI-QPWGQVIGSIPADV 111 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 ++ VV + + G + I I T W F++ IP D++EV++ F L Sbjct: 112 YVP--VVALLIVATGTT--HQWWVIPLIMTGTQWYFFFNVIAGYLAIPADIQEVTQVFHL 167 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230 GW+ + P P L+ ++ + W +A+E+I G + G+G+YIA Sbjct: 168 KGWRWWTRFLFPSLFPYLITAIINAAGAAWNADIAAELITWGTKQFSVAGLGAYIA 223 >gi|325529732|gb|EGD06588.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia sp. TJI49] Length = 115 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 78/109 (71%), Positives = 95/109 (87%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I+LD +LP+YA RTTLRML+AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+L Sbjct: 7 ISLDPSNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVL 66 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 GF++FTV +F+ L+PG+V+GAELAAIFAIFTSQ WNMTFS YQSL +P Sbjct: 67 GFISFTVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVP 115 >gi|209516010|ref|ZP_03264870.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia sp. H160] gi|209503470|gb|EEA03466.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia sp. H160] Length = 148 Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 78/132 (59%), Positives = 102/132 (77%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICLIAMASIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLSYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTS 145 AELAAIFAIFTS Sbjct: 137 AELAAIFAIFTS 148 >gi|209521333|ref|ZP_03270048.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia sp. H160] gi|209498218|gb|EDZ98358.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia sp. H160] Length = 148 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 101/134 (75%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +RR+ PN +D +AF L+I +I + G +T P + I+LD LP+YA RTTLR Sbjct: 15 ARRLLPNAWDFIAFPLIICLIAMASIGFHQTLAPMSTLKTQVISLDPAHLPEYAMRTTLR 74 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML+AMV SL+FT Y TLAAKSRR VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V Sbjct: 75 MLAAMVASLVFTLTYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFLALFPGRV 134 Query: 132 IGAELAAIFAIFTS 145 +GAELAAIFAIFTS Sbjct: 135 LGAELAAIFAIFTS 148 >gi|224456410|ref|ZP_03664883.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. tularensis MA00-2987] Length = 245 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 118/208 (56%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ AA P Sbjct: 28 FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQ 87 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 +FFP+V + + N+W L++ GT +Y+LFNVI+G S P + E+ SFH+ G Sbjct: 88 PIFFPIVAVLILAGDGSLNVWCIPLIMTGTSYYVLFNVISGFSNLPTEIIEMTKSFHLKG 147 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 +WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ +T Sbjct: 148 LKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANN 207 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLY 578 + L V+ +C V F+W PLY Sbjct: 208 QLHDAALAVVALCSLVALCIIFIWKPLY 235 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 4/197 (2%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TT+R+ AM+IS+ S + + PI+ I +IP F F +V + L Sbjct: 42 ETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIF--FPIVAVLIL 99 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + + I I T + + F++ N+P ++ E+++SF L G + ++ +P Sbjct: 100 AGDGSL--NVWCIPLIMTGTSYYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIP 157 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 P +V ++ + G W +A+E+++ G I + GIG+ ++ L A++ Sbjct: 158 AVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLHDAALAVV 217 Query: 247 TMLGVIFLYDQLLFRPM 263 + ++ L +++P+ Sbjct: 218 ALCSLVALCIIFIWKPL 234 >gi|206895688|ref|YP_002246654.1| ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] gi|206738305|gb|ACI17383.1| ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] Length = 499 Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 137/227 (60%), Gaps = 2/227 (0%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+ A +SL F Y A+ R +++ ILDI+QS+PILGF + +F+ ++ Sbjct: 10 STYRIFVAYFLSLAFGIFYGVSASSGPRREKIMIAILDILQSVPILGFFPVAIAFFVAVF 69 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G+ IG ELAAIF IFTSQ WN+ F +Y+++ +PR+L EV ++F S + +P Sbjct: 70 RGQRIGLELAAIFLIFTSQAWNIAFGVYETVKTLPRELVEVGKAFNFSKTFTIQRIYLPA 129 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P +V+N +SM+ GW+F++ASE+I +G + LPG+GS + + + ++L ++ + T Sbjct: 130 MVPTIVFNSGVSMANGWYFLMASEIITLGSQEVKLPGLGSSMMNYLAQGNILGVVMCIGT 189 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLER--TTGIYPADSWVLYLFRKT 292 ++ + L L+FRP++ WS F+ T +P + VL+ F K Sbjct: 190 IVLINALLQVLIFRPLVKWSELFQYNAVGTAPEWPTVADVLFDFGKA 236 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 6/165 (3%) Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS-LLMIFGTQWYILFNVIAGAS 473 + I A +L + PA VF+P +V+ ++ P LS LL++ G+ WY LFN+ GA Sbjct: 329 AQNIYSLASILGSIPAVVFYPPIVALGGRAYMEP---LSILLLLTGSFWYALFNMSKGAM 385 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 P E+A F+I GW +++ I++P I P +TGA+TA GGAWNASIV+E +G Sbjct: 386 LLPGVLTEMAQVFNIKGWLYYKNILIPAILPPLITGALTAWGGAWNASIVAEHVQFGDKV 445 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 G+GA + +ST ++L VL M ++ +N W P Y Sbjct: 446 YSIPGIGALLVQSTADTK--ALLLIVLSMTALIVLVNMLFWRPWY 488 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 17/218 (7%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P +I+ +P L V TT+R+++A+VI++L + + K+ + + Sbjct: 286 PSNILSQIPAALTV---------TTMRVVAAVVIAVLLALPFVIRSVKNVAAAQNIYSLA 336 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 I+ SIP + F V Y E +I + T W F+M + +P Sbjct: 337 SILGSIPAVVFYPPIVALGGRAY------MEPLSILLLLTGSFWYALFNMSKGAMLLPGV 390 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L E+++ F + GW + + +P +P L+ + + G W + +E + GD V +PG Sbjct: 391 LTEMAQVFNIKGWLYYKNILIPAILPPLITGALTAWGGAWNASIVAEHVQFGDKVYSIPG 450 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 IG+ L D A+L +L+M +I L + L +RP Sbjct: 451 IGAL--LVQSTADTKALLLIVLSMTALIVLVNMLFWRP 486 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 8/155 (5%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF----GTQWYILFNVIAGASAFPND 478 +L + P FFP+ ++ + L L IF W I F V P + Sbjct: 47 DILQSVPILGFFPVAIAFFVAVFRGQRIGLELAAIFLIFTSQAWNIAFGVYETVKTLPRE 106 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 EV +F+ + + I LP + P V + + W + SE+ + G ++ G Sbjct: 107 LVEVGKAFNFSKTFTIQRIYLPAMVPTIVFNSGVSMANGWYFLMASEIITLGSQEVKLPG 166 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 LG+ + +G+ +LGV++ ++ +N L Sbjct: 167 LGSSMMNYLAQGN----ILGVVMCIGTIVLINALL 197 >gi|116334712|ref|YP_796239.1| ABC-type anion transport system, duplicated permease component [Lactobacillus brevis ATCC 367] gi|116100059|gb|ABJ65208.1| ABC-type anion transport system, duplicated permease component [Lactobacillus brevis ATCC 367] Length = 282 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 128/209 (61%), Gaps = 5/209 (2%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + A RT R+ M+ SL F+ V+ +AA+ + ++P++++++S+P+ GFLTFT Sbjct: 27 QLVEAALRTMTRLFIGMLWSLAFSLVFGVMAARYKTARYFILPLVNLLESVPLRGFLTFT 86 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +FM +P V+G E AIF +FT+Q WN+ +YQSL P++L V+ F + WQ+ Sbjct: 87 TAWFMGWFPNNVLGVEAVAIFGVFTAQAWNIMLVLYQSLRVTPKELLTVADPFGCNSWQR 146 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG----DTVIPLPGIGSYIALAIKE 235 FW L +++PG++WNM++S S WF +VA E V +T+I LPGIGSYI +A+ Sbjct: 147 FWRLEFIYAVPGILWNMVISQSAAWFALVACEQATVAFPRTETLI-LPGIGSYIQIALDR 205 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 A+ A+ +L + + LF+P+I Sbjct: 206 SKFGAVAAALGALLVCVLFTNVCLFQPLI 234 >gi|330834718|ref|YP_004409446.1| binding-protein-dependent transport systems inner membrane component [Metallosphaera cuprina Ar-4] gi|329566857|gb|AEB94962.1| binding-protein-dependent transport systems inner membrane component [Metallosphaera cuprina Ar-4] Length = 536 Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 130/468 (27%), Positives = 216/468 (46%), Gaps = 26/468 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ +++S++ + A A K+R + V + ++++S+P++ F +++F Sbjct: 13 TISRVFLTLILSIVTGWFLAYFAIKNRIFEDIFVSVSEVLESVPVISFFPVVLIFFATDI 72 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G IG ELA IF +FT+ VWN+ +YQ+ P +L EV+ + RL K L +PF Sbjct: 73 GGS-IGIELAVIFLVFTAVVWNIWMGIYQAFKTAPENLREVAENLRLGFLGKLSKLYIPF 131 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+P + N++ S + F++ SE+ VG+T + GIGS IA LYA L Sbjct: 132 SVPRIAANLIPSFADAMFYITVSEVFSVGNTNYAVFGIGSLIANLTANAKYTEALYA-LA 190 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW--NF 305 +LGV R + F ++R Y D+ V + + R I YS+ N Sbjct: 191 VLGVFVALITFALREF----SSFAVQR----YGLDTEVSNMSVRRGRFR-IRYSAKISNA 241 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P++ K + R+ V + + SN +V L +F I +S Sbjct: 242 VAPVTKLAKYVIRSKPVSLDEEEDEKRRSWSNVGKVIAALFLFGISYSIFTVIETIPKST 301 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS-IIWIPVGIWIGFRPHISSKIQPFAQ 423 + T D LY+I +T + V LI I S +I I +G W+ I P Q Sbjct: 302 WVSLVSSTPFD-LYLI----VTDYARVALISITSLVIAIFLGYWLSLHHRIDRVAIPVIQ 356 Query: 424 LLAAFPANVFFPLVVSCVS---YYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPN 477 AAFPA +FPLV Y L P ++ LL T +Y+ ++ G P+ Sbjct: 357 TFAAFPAPAYFPLVYGATYTMLYKILGPFTNEFYVLLLGFISTFYYVFYSYWMGIKNMPS 416 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 ++ EV ++ +++ W+ + ++ P FPY +TG + AW + E Sbjct: 417 EYWEVMNNLNLSFWQKLKKVVFPSSFPYVITGLTSTVNSAWGGLAIGE 464 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 130/285 (45%), Gaps = 30/285 (10%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPIT-LDVHSLPQYASRTT 69 RR + N+ ++A + + GI + I+ T+P+ V +V T D++ + +R Sbjct: 267 KRRSWSNVGKVIAALFLFGISYSIFTVIE--TIPKSTWVSLVSSTPFDLYLIVTDYARVA 324 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFTVVYFMNLY 127 L ++++VI++ + + R+ V +P++ + P + L + Y M LY Sbjct: 325 LISITSLVIAIFLGY----WLSLHHRIDRVAIPVIQTFAAFPAPAYFPLVYGATYTM-LY 379 Query: 128 PGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 K++G E + F S + + +S + + N+P + EV + LS WQK + Sbjct: 380 --KILGPFTNEFYVLLLGFISTFYYVFYSYWMGIKNMPSEYWEVMNNLNLSFWQKLKKVV 437 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDL--- 238 P S P ++ + +++ W + E I G T+ G+ +ALA + +L Sbjct: 438 FPSSFPYVITGLTSTVNSAWGGLAIGEYWPDIYDGRTLQVHEGLMKELALADSQGNLALI 497 Query: 239 --LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281 L+IL+A+ V+ +Y L R ++ S + + GIY A Sbjct: 498 GWLSILFAI-----VVVIYSILFTRKLLDLSRE-KYVAEEGIYAA 536 >gi|325519241|gb|EGC98695.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 95 Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 63/95 (66%), Positives = 73/95 (76%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ILFNVIAGA ++PND+KE +F I GW+WWR ILPGIFPYYVTGAITA GGAWNASIV Sbjct: 1 ILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIV 60 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 SE WG + GLGAYIA+ T G FP+++LG Sbjct: 61 SEFVQWGDTKVVAHGLGAYIAQMTAAGDFPKIILG 95 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 44/91 (48%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 F++ + P D +E +++FR+ GWQ + +P P V + + G W + SE Sbjct: 3 FNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSE 62 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + GDT + G+G+YIA D I+ Sbjct: 63 FVQWGDTKVVAHGLGAYIAQMTAAGDFPKII 93 >gi|325967864|ref|YP_004244056.1| binding-protein-dependent transporters inner membrane component [Vulcanisaeta moutnovskia 768-28] gi|323707067|gb|ADY00554.1| binding-protein-dependent transport systems inner membrane component [Vulcanisaeta moutnovskia 768-28] Length = 557 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 125/538 (23%), Positives = 247/538 (45%), Gaps = 30/538 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ +++S++ + + AAK+ + + I ++++P++ F +++F+ G Sbjct: 23 RVALTIILSIVLGWFFGYAAAKNGLFERIFLSITQTLEAVPVITFFPIVLIFFVKSI-GG 81 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG ELA F +FT+ VWN+ Y+++ P+ LE+ + L W KF YL +P +MP Sbjct: 82 YIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMLNLGFWGKFRYLYIPVTMP 141 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 + N+++S + F++V SE++ +G T + GIG+ IA + A T LG Sbjct: 142 RVAGNVLVSFADALFYIVVSEVVTLGTTQYSVFGIGALIASWTSRSEWT----AAFTGLG 197 Query: 251 V-IFLYDQLLF---RPMIVWSNKF------RLERTTGIYP-ADSWVLYL-FRKTNFLRFI 298 V + + +LF RP + W+ K+ + RT P S V L R +LR + Sbjct: 198 VLVVMVTSVLFGILRPFVDWAVKYSYDPFMEVTRTRVRRPIVTSRVRSLAARNMRYLRRV 257 Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358 + + P+ ++ P N + ++R + + + + +I Sbjct: 258 -VAVEDAIMPIFVKASSYAVRHRLLSRPRPRNI--ITESERYIGIGIVIFVIGLITYSIY 314 Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 +W++ + + Y+ L ++ + FRV+++ + A + IPV + + S + Sbjct: 315 ESWKTTWVPIINNLYEYGLLYLYYLGLDWFRVILVTVAAILTAIPVNYLMVTHRRVESIL 374 Query: 419 QPFAQLLAAFPANVFFPLV-VSCVSYY------HLNPNLWLSLLMIFGTQWYILFNVIAG 471 P + LA+ P + + PL+ + ++Y H++ + + ++ T WY+++N+ G Sbjct: 375 LPVLEDLASIPVSAYLPLIAIPFITYLAVSLGSHISLEILVFVVAYLSTAWYVIYNMYVG 434 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW-- 529 P +VA + ++ W+ R + +PG P +TG + G W V+E Sbjct: 435 MKTIPRSLWDVAENLRLSTWQKLRRLAIPGAMPATITGLASTAGSTWGGLEVAEYIQGLN 494 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G +++ G A + T G+ + LI+ V+ L+ FLW L+ RL Sbjct: 495 GQVYM-VHGYTALMDYYTAIGNIVGLEAMSLILGINVVLLSVFLWRKLFRLARERYRL 551 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 12/203 (5%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ----PFAQLLAAFPA 430 ++ V +L + F V L II SI+ +G + G+ + + Q L A P Sbjct: 8 SIVLVAFLATLATFGRVALTIILSIV---LGWFFGYAAAKNGLFERIFLSITQTLEAVPV 64 Query: 431 NVFFPLV----VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 FFP+V V + Y + L + L+ W I P ++ A Sbjct: 65 ITFFPIVLIFFVKSIGGY-IGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEML 123 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 ++ W +RY+ +P P + + A +VSEV + G G+GA IA Sbjct: 124 NLGFWGKFRYLYIPVTMPRVAGNVLVSFADALFYIVVSEVVTLGTTQYSVFGIGALIASW 183 Query: 547 TEKGSFPEVVLGVLIMCCFVLAL 569 T + + G+ ++ V ++ Sbjct: 184 TSRSEWTAAFTGLGVLVVMVTSV 206 >gi|332797789|ref|YP_004459289.1| ABC-type anion transport system, duplicated permease component [Acidianus hospitalis W1] gi|332695524|gb|AEE94991.1| ABC-type anion transport system, duplicated permease component [Acidianus hospitalis W1] Length = 544 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 124/491 (25%), Positives = 216/491 (43%), Gaps = 52/491 (10%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 ++ KS+ + + + +I +S+P++ F +++F+ G +G ELA +F +FT+ VW Sbjct: 35 ISLKSKTFENIYISLSEIFESVPVISFFPVVLIFFV-FSIGGSLGIELAVLFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P ++EEV R++R K L +PFS+P + N++ S + F++ Sbjct: 94 NIWMGIYQAFKTVPSEMEEVIRNYRFGFVGKMLRLYIPFSIPRIAANLIPSFADALFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS- 267 SE+ +G +PGIG+ IA E D +YA++ +LG+ LL R +S Sbjct: 154 VSEVFSIGTKCYEVPGIGTLIAQYTAEGDYTDAIYALI-VLGIFTTTITLLLREFAEYSV 212 Query: 268 NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN---VKKLCRTLGVIR 324 K+ L+ L F++ F I YS + LSN+ KL + L Sbjct: 213 KKYGLDTEAS--------LKSFKRGRFR--IRYS-----ARLSNSKGVFAKLGKYLTKPP 257 Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVC-------------GVAIGIAWQSIGYIVNHF 371 + +N L + + I V I + + Y+++ Sbjct: 258 YFTRQNRLMDEEEEAKKRKIPINMISAGIGILLLIIILYGAYSVIISVKPSTWSYLISTL 317 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 QD +I LG RV V+ +++ I + VG +I + I P Q +AFPA Sbjct: 318 P-QD---LIDLGA-DYLRVAVISLMSFIFAVFVGYYIARHTNADRAIVPIIQTFSAFPAP 372 Query: 432 VFFPLVVSCVSYY------HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 +FPL+ Y ++ LL T +Y+ ++ G P+++ E+ + Sbjct: 373 AYFPLLYGFTYTYVSSIFGPFTNEFYVLLLGFISTFYYVFYSFWIGVKNLPSEYWELMDN 432 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT-----TGLG 540 + W R IILP FPY + G + AW + E W I+ TGL Sbjct: 433 LKLGFWTKMRKIILPATFPYIIAGMSSTINSAWGGLAIGEY--WPDIYQSQTLEVRTGLM 490 Query: 541 AYIAESTEKGS 551 +A + +G+ Sbjct: 491 KALAVADNQGN 501 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 17/247 (6%) Query: 48 IVDIVPITLD--VHSLPQYASRTTLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLV 101 I+ + P T + +LPQ L VISL+ +F++A A+ +V Sbjct: 302 IISVKPSTWSYLISTLPQDLIDLGADYLRVAVISLM-SFIFAVFVGYYIARHTNADRAIV 360 Query: 102 PILDIMQSIPILGFLTFTVVY-FMNLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQS 157 PI+ + P + F ++Y F Y + G E + F S + + +S + Sbjct: 361 PIIQTFSAFPAPAY--FPLLYGFTYTYVSSIFGPFTNEFYVLLLGFISTFYYVFYSFWIG 418 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM---IV 214 + N+P + E+ + +L W K + +P + P ++ M +++ W + E I Sbjct: 419 VKNLPSEYWELMDNLKLGFWTKMRKIILPATFPYIIAGMSSTINSAWGGLAIGEYWPDIY 478 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 T+ G+ +A+A + +L + + L ++ +Y L R M+ + K + Sbjct: 479 QSQTLEVRTGLMKALAVADNQGNLALVGWLSLIFAIIVVIYSVLFTRKMMDLARK-KYVA 537 Query: 275 TTGIYPA 281 GIY A Sbjct: 538 EEGIYAA 544 >gi|146304142|ref|YP_001191458.1| binding-protein-dependent transport systems inner membrane component [Metallosphaera sedula DSM 5348] gi|145702392|gb|ABP95534.1| binding-protein-dependent transport systems inner membrane component [Metallosphaera sedula DSM 5348] Length = 538 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 224/474 (47%), Gaps = 37/474 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ +++S++ ++ LA K+R V + + ++++S+P++ F +++F++ Sbjct: 14 TVGRVFITIILSIVTGWLLGYLALKNRAFENVYISLSEVLESVPVISFFPVVLIFFVSDI 73 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +G +LA IF +FT+ VWN+ +YQ+ +P +L EV+ + RL K L +PF Sbjct: 74 -GGFLGTQLAVIFLVFTAVVWNIWMGIYQAFKTVPENLNEVAENLRLGFLGKMSKLYIPF 132 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA----LAIKEQDLLAILY 243 S+P + N++ S + F++ SE+ VG++ + GIGS I+ L + Q L A Sbjct: 133 SIPRIAANLIPSFADAMFYITVSEVFSVGNSNYAVFGIGSLISRLTTLGLYNQALYA--- 189 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302 L +L V+ ++ R +S ++ L+ +S L R +R+ S Sbjct: 190 --LGILAVVVVFITFGLREFASFSVQRYGLD-------TESSNKALRRGRFRIRYSAKVS 240 Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC----VVCGVAIG 358 N +P+S + + R+ + E ++ ++ ++ + V V Sbjct: 241 -NAIAPVSKLARYVTRS-KTVPVDVDEEEEKVRQWGKIGIVIAALFLLGISYSVFTVIRS 298 Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 ++ Q+ ++++ Y VL I RV V+ +++ +I I VG W+ + Sbjct: 299 VSPQTWSFLISSTPYDLVLI-----GIDYMRVGVISVVSLLIAIFVGYWLSVHERTERVV 353 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL-------WLSLLMIFGTQWYILFNVIAG 471 P Q +A+FPA +FPL+ +Y L P L ++ LL T +Y+ ++ G Sbjct: 354 IPMIQTVASFPAPAYFPLLYGA-TYPILRPVLGGFTSEFYVLLLGFISTFYYVFYSYWMG 412 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 P ++ EV + ++T W+ R +++P PY V G + AW + E Sbjct: 413 IKNMPKEYWEVMDNLNLTFWQRLRRVVIPSAMPYIVAGLTSTVNSAWGGLAIGE 466 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--GKVIG- 133 V+SLL + R V++P++ + S P + F ++Y YP V+G Sbjct: 330 VVSLLIAIFVGYWLSVHERTERVVIPMIQTVASFPAPAY--FPLLYGAT-YPILRPVLGG 386 Query: 134 --AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +E + F S + + +S + + N+P++ EV + L+ WQ+ + +P +MP Sbjct: 387 FTSEFYVLLLGFISTFYYVFYSYWMGIKNMPKEYWEVMDNLNLTFWQRLRRVVIPSAMPY 446 Query: 192 LVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDL-----LAILY 243 +V + +++ W + E I G T+ G+ +ALA + L L+IL+ Sbjct: 447 IVAGLTSTVNSAWGGLAIGEYWPDIYDGRTLEVHQGLMRELALADSQGKLALVGWLSILF 506 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281 A++ ++ +F +L M + K+ E GIY A Sbjct: 507 AIVVVIYSLFFTRKL----MDLARQKYVAEE--GIYAA 538 >gi|325519243|gb|EGC98696.1| sulfonate/nitrate/taurine transporter permease [Burkholderia sp. TJI49] Length = 92 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 55/92 (59%), Positives = 76/92 (82%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 VG+WIG RP ++ K+QP AQ LAAFPAN+ FP+ V ++ +HLN ++WLS L++ GTQWY Sbjct: 1 VGVWIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWY 60 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 ILFNVIAGA+++PND++E A++F I GW+WWR Sbjct: 61 ILFNVIAGATSYPNDYREAATNFRIRGWQWWR 92 >gi|284996663|ref|YP_003418430.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus L.D.8.5] gi|284444558|gb|ADB86060.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus L.D.8.5] Length = 535 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 123/498 (24%), Positives = 232/498 (46%), Gaps = 46/498 (9%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A KS+ + + +++I +S+P++ F +++F+ G IG ELA F +FT+ VW Sbjct: 35 IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P DL EVS ++RL K L +P+S P + N++ S + F++ Sbjct: 94 NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267 SE+ +G + + GIG+ I Q+ Y + L LG++ + P+I+++ Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201 Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318 R T Y D+ + R +R+ S N +P K + R Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + R + P +L + + + +L F + V + W Y+++ T +VL+ Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437 + + I RV+ + I++ + I +G +I R + + P Q A+FPA +FPL+ Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371 Query: 438 VSCVSYYHLNPNLWLS-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + +S+ H W+ LL T +Y+ ++ G PN + E+ +++ + W Sbjct: 372 TATISFIHSVFGSWIEEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550 RY+I+P FPY ++G + AW + E S + + G+ IA +T G Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491 Query: 551 SFP-----EVVLGVLIMC 563 + P ++ G+++M Sbjct: 492 NIPLAAWDSLIFGIVVMI 509 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 4/138 (2%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126 +R+L ++SL+F+ A R+ VL+P + S P + L FT + F++ Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIHS 380 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G I E I F S + + +S + + N+P E+ +++ S W K Y+ +P Sbjct: 381 VFGSWI-EEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYVIIP 439 Query: 187 FSMPGLVWNMMMSMSGGW 204 + P ++ + +++ W Sbjct: 440 STFPYIISGLSSTINSAW 457 >gi|227829305|ref|YP_002831084.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus L.S.2.15] gi|227455752|gb|ACP34439.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus L.S.2.15] Length = 535 Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 123/498 (24%), Positives = 232/498 (46%), Gaps = 46/498 (9%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A KS+ + + +++I +S+P++ F +++F+ G IG ELA F +FT+ VW Sbjct: 35 IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P DL EVS ++RL K L +P+S P + N++ S + F++ Sbjct: 94 NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267 SE+ +G + + GIG+ I Q+ Y + L LG++ + P+I+++ Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201 Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318 R T Y D+ + R +R+ S N +P K + R Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + R + P +L + + + +L F + V + W Y+++ T +VL+ Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437 + + I RV+ + I++ + I +G +I R + + P Q A+FPA +FPL+ Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371 Query: 438 VSCVSYYHLNPNLWLS-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + +S+ H W+ LL T +Y+ ++ G PN + E+ +++ + W Sbjct: 372 AATISFIHSVFGSWIDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550 RY+I+P FPY ++G + AW + E S + + G+ IA +T G Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491 Query: 551 SFP-----EVVLGVLIMC 563 + P ++ G+++M Sbjct: 492 NIPLAAWDSLIFGIVVMI 509 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 4/138 (2%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF---LTFTVVYFMNL 126 +R+L ++SL+F+ A R+ VL+P + S P + L + F++ Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFAATISFIHS 380 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G I E I F S + + +S + + N+P E+ +++ S W K Y+ +P Sbjct: 381 VFGSWID-EFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYVIIP 439 Query: 187 FSMPGLVWNMMMSMSGGW 204 + P ++ + +++ W Sbjct: 440 STFPYIISGLSSTINSAW 457 >gi|15899210|ref|NP_343815.1| ABC transporter, putative [Sulfolobus solfataricus P2] gi|227826664|ref|YP_002828443.1| binding-protein-dependent transporters inner membrane component [Sulfolobus islandicus M.14.25] gi|238618750|ref|YP_002913575.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.16.4] gi|13815769|gb|AAK42605.1| ABC transporter, putative [Sulfolobus solfataricus P2] gi|227458459|gb|ACP37145.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.14.25] gi|238379819|gb|ACR40907.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.16.4] gi|323476396|gb|ADX81634.1| ABC-type anion transport system, duplicated permease [Sulfolobus islandicus HVE10/4] Length = 535 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 122/498 (24%), Positives = 232/498 (46%), Gaps = 46/498 (9%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A KS+ + + +++I +S+P++ F +++F+ G IG ELA F +FT+ VW Sbjct: 35 IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P DL EVS ++RL K L +P+S P + N++ S + F++ Sbjct: 94 NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267 SE+ +G + + GIG+ I Q+ Y + L LG++ + P+I+++ Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201 Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318 R T Y D+ + R +R+ S N +P K + R Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + R + P +L + + + +L F + V + W Y+++ T +VL+ Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437 + + I RV+ + I++ + I +G +I R + + P Q A+FPA +FPL+ Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371 Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + +S+ H ++ LL T +Y+ ++ G PN + E+ +++ + W Sbjct: 372 TATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550 RY+I+P FPY ++G + AW + E S + + G+ IA +T G Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491 Query: 551 SFP-----EVVLGVLIMC 563 + P ++ G+++M Sbjct: 492 NIPLAAWDSLIFGIVVMI 509 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126 +R+L ++SL+F+ A R+ VL+P + S P + L FT + F++ Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIH- 379 Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 V G+ E I F S + + +S + + N+P E+ +++ S W K Y+ Sbjct: 380 ---SVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYV 436 Query: 184 GVPFSMPGLVWNMMMSMSGGW 204 +P + P ++ + +++ W Sbjct: 437 IIPSTFPYIISGLSSTINSAW 457 >gi|229583828|ref|YP_002842329.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.16.27] gi|228018877|gb|ACP54284.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.16.27] Length = 535 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 121/498 (24%), Positives = 231/498 (46%), Gaps = 46/498 (9%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A KS+ + + +++I +S+P++ F +++F+ G IG ELA F +FT+ VW Sbjct: 35 IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P DL EVS ++RL K L +P+S P + N++ S + F++ Sbjct: 94 NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267 SE+ +G + + GIG+ I Q+ Y + L LG++ + P+I+++ Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201 Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318 R T Y D+ + R +R+ S N +P K + R Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + R + P +L + + + +L + V + W Y+++ T +VL+ Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGALSTISSVPKSV-WL---YLIS--TTPNVLF 314 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437 + + I RV+ + I++ + I +G +I R + + P Q A+FPA +FPL+ Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371 Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + +S+ H ++ LL T +Y+ ++ G PN + E+ +++ + W Sbjct: 372 TATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550 RY+I+P FPY ++G + AW + E S + + G+ IA +T G Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491 Query: 551 SFP-----EVVLGVLIMC 563 + P ++ G+++M Sbjct: 492 NIPLAAWDSLIFGIVVMI 509 Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126 +R+L ++SL+F+ A R+ VL+P + S P + L FT + F++ Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIH- 379 Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 V G+ E I F S + + +S + + N+P E+ +++ S W K Y+ Sbjct: 380 ---SVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYV 436 Query: 184 GVPFSMPGLVWNMMMSMSGGW 204 +P + P ++ + +++ W Sbjct: 437 IIPSTFPYIISGLSSTINSAW 457 >gi|229583288|ref|YP_002841687.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus Y.N.15.51] gi|228014004|gb|ACP49765.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus Y.N.15.51] Length = 535 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 121/497 (24%), Positives = 230/497 (46%), Gaps = 44/497 (8%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A KS+ + + +++I +S+P++ F +++F+ G IG ELA F +FT+ VW Sbjct: 35 IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P DL EVS ++RL K L +P+S P + N++ S + F++ Sbjct: 94 NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 SE+ +G + + GIG+ I Q+ L LG++ + P+I+++ Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQEYT----LALDGLGILAI-------PIIIFTY 202 Query: 269 KFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR-------T 319 R T Y D+ + R +R+ S N +P K + R + Sbjct: 203 LLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSASS 261 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 R + P +L + + + +L F + V + W Y+++ T +VL+ Sbjct: 262 EEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLFN 315 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV-V 438 + + I RV+ + I++ + I +G +I R + + P Q A+FPA +FPL+ Sbjct: 316 LLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFT 372 Query: 439 SCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 + +S+ H ++ LL T +Y+ ++ G PN + E+ +++ + W Sbjct: 373 ATISFIHTVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNVPNQYWEIMKNYNFSFWHK 432 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKGS 551 RY+I+P FPY ++G + AW + E S + + G+ IA +T G+ Sbjct: 433 LRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANGN 492 Query: 552 FP-----EVVLGVLIMC 563 P ++ G+++M Sbjct: 493 IPLAAWDSLIFGIVVMI 509 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126 +R+L ++SL+F+ A R+ VL+P + S P + L FT + F++ Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIH- 379 Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 V G+ E I F S + + +S + + N+P E+ +++ S W K Y+ Sbjct: 380 ---TVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNVPNQYWEIMKNYNFSFWHKLRYV 436 Query: 184 GVPFSMPGLVWNMMMSMSGGW 204 +P + P ++ + +++ W Sbjct: 437 IIPSTFPYIISGLSSTINSAW 457 >gi|323473746|gb|ADX84352.1| ABC-type anion transport system, duplicated permease component [Sulfolobus islandicus REY15A] Length = 535 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 121/498 (24%), Positives = 233/498 (46%), Gaps = 46/498 (9%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A KS+ + + +++I +S+P++ F +++F+ G IG ELA F +FT+ VW Sbjct: 35 IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P DL EVS ++RL K L +P+S P + N++ S + F++ Sbjct: 94 NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267 SE+ +G + + GIG+ I Q+ Y + L LG++ + P+I+++ Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201 Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318 R T Y D+ + R +R+ S N +P K + R Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + R + P +L + + + +L F + V + W Y+++ T +VL+ Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437 + + I RV+ + I++ + I +G +I R + + P Q A+FPA +FPL+ Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371 Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 ++ +S+ H ++ LL T +Y+ ++ G PN + E+ +++ + W Sbjct: 372 IATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550 RY+I+P FPY ++G + AW + E S + + G+ I+ +T G Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSISVATANG 491 Query: 551 SFP-----EVVLGVLIMC 563 + P ++ G+++M Sbjct: 492 NIPLAAWDSLIFGIVVMI 509 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 4/138 (2%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 +R+L ++SL+F+ A R+ VL+P + S P + + ++ + Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFIATIS-FIH 379 Query: 130 KVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 V G+ E I F S + + +S + + N+P E+ +++ S W K Y+ +P Sbjct: 380 SVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYVIIP 439 Query: 187 FSMPGLVWNMMMSMSGGW 204 + P ++ + +++ W Sbjct: 440 STFPYIISGLSSTINSAW 457 >gi|229578075|ref|YP_002836473.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus Y.G.57.14] gi|228008789|gb|ACP44551.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus Y.G.57.14] Length = 535 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 122/498 (24%), Positives = 232/498 (46%), Gaps = 46/498 (9%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A KS+ + + +++I +S+P++ F +++F+ G IG ELA F +FT+ VW Sbjct: 35 IAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV-YRIGGYIGIELAVDFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P DL EVS ++RL K L +P+S P + N++ S + F++ Sbjct: 94 NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAIFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-LTMLGVIFLYDQLLFRPMIVWS 267 SE+ +G + + GIG+ I Q+ Y + L LG++ + P+I+++ Sbjct: 154 VSEVFSIGSSSYHVFGIGTLIGEFTASQE-----YTLALDGLGILAI-------PIIIFT 201 Query: 268 NKFR--LERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR------- 318 R T Y D+ + R +R+ S N +P K + R Sbjct: 202 YLLRRFANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-NTIAPFVKLSKYVTRIGSRSAS 260 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + R + P +L + + + +L F + V + W Y+++ T +VL+ Sbjct: 261 SEEETRRNLPWRYLGIGISVLLLGLLVYGAFSTISSVPKSV-WL---YLIS--TTPNVLF 314 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV- 437 + + I RV+ + I++ + I +G +I R + + P Q A+FPA +FPL+ Sbjct: 315 NLLIDYI---RVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLF 371 Query: 438 VSCVSYYHL-----NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + +S+ H ++ LL T +Y+ ++ G PN + E+ +++ + W Sbjct: 372 TATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWH 431 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRTTGLGAYIAESTEKG 550 RY+I+P FPY ++G + AW + E S + + G+ IA +T G Sbjct: 432 KLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVSHGIMKSIAVATANG 491 Query: 551 SFP-----EVVLGVLIMC 563 + P ++ G+++M Sbjct: 492 NVPLAAWDSLIFGIVVMI 509 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF--LTFT-VVYFMNL 126 +R+L ++SL+F+ A R+ VL+P + S P + L FT + F++ Sbjct: 321 IRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQTYASFPAPAYFPLLFTATISFIH- 379 Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 V G+ E I F S + + +S + + N+P E+ +++ S W K Y+ Sbjct: 380 ---SVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWHKLRYV 436 Query: 184 GVPFSMPGLVWNMMMSMSGGW 204 +P + P ++ + +++ W Sbjct: 437 IIPSTFPYIISGLSSTINSAW 457 >gi|159041469|ref|YP_001540721.1| binding-protein-dependent transport systems inner membrane component [Caldivirga maquilingensis IC-167] gi|157920304|gb|ABW01731.1| binding-protein-dependent transport systems inner membrane component [Caldivirga maquilingensis IC-167] Length = 553 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 121/527 (22%), Positives = 246/527 (46%), Gaps = 47/527 (8%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 AAK+ + V + + ++++P++ F +V+F++ G +G ELA F +FT+ VWN Sbjct: 39 AAKNGLVERVFLSVTQTLEAVPVITFFPIVLVFFISSIRGY-LGVELAVDFLVFTAVVWN 97 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + Y+S+ + + LE+V+ ++LS KF L +P ++P + N+++S + G F++ Sbjct: 98 IWVGEYESIKTVSQSLEDVANMYKLSFIAKFSKLYIPVTIPRVAGNVLVSFADGLFYITV 157 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 SE+I +G + GIGS I + + A++ ++ ++ + + RP + W+ K Sbjct: 158 SEVIALGTKSYHVFGIGSLIFSWVNVGMWFNAIIALIVLVIMVTIVVFGVLRPFVNWAVK 217 Query: 270 FRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFP- 328 + + + +T R + + L+ NV+ L R R P Sbjct: 218 YSYDPYAEV-----------MRTGVRR---QTPSRIRASLARNVRYLRRITAAERALIPA 263 Query: 329 -------ENFLQLCSNQRVSYMLDIFWFCVVCGV----------AIGIAWQS--IGYIVN 369 + +L R +L F V G+ ++ +W + + ++N Sbjct: 264 FVRATSYAVYHRLTVRPRPINVLTRFDKYVAAGIGSLLLALIAYSVYSSWSTTWLPIMIN 323 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +V Y+ +LG + R++++ + A +I IP+ + RP + + + P + LA+ P Sbjct: 324 IYDNWEV-YLYYLG-LDWLRILLVTVSAILIAIPINYLMVTRPKLEAVLLPILEDLASIP 381 Query: 430 ANVFFPLV-VSCVSYYHLNPNLWLSL-LMIF-----GTQWYILFNVIAGASAFPNDFKEV 482 + + PLV + V+Y + L +SL +++F T WY+++N+ G P +V Sbjct: 382 VSAYLPLVAIPFVTYLAIRLGLRISLEILVFIVAFLSTAWYVIYNMYVGMKTIPRSLWDV 441 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW--GHIHLRTTGLG 540 A++ +++ W + +PG P +TG + G W ++E G +++ G Sbjct: 442 ANNLNLSSWYKLTKLAIPGAMPATITGLASTVGSTWGGLEIAEYFQGINGKVYM-VHGYT 500 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 A + T G+ + LI+ V+ L+ FLW L+ + R+ Sbjct: 501 ALMDYYTATGNLIGLEAMSLILAINVILLSVFLWRSLFTMARQRYRM 547 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 3/138 (2%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV---VYFMNL 126 LR+L V ++L L +L VL+PIL+ + SIP+ +L V ++ + Sbjct: 340 LRILLVTVSAILIAIPINYLMVTRPKLEAVLLPILEDLASIPVSAYLPLVAIPFVTYLAI 399 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G I E+ F S W + ++MY + IPR L +V+ + LS W K L +P Sbjct: 400 RLGLRISLEILVFIVAFLSTAWYVIYNMYVGMKTIPRSLWDVANNLNLSSWYKLTKLAIP 459 Query: 187 FSMPGLVWNMMMSMSGGW 204 +MP + + ++ W Sbjct: 460 GAMPATITGLASTVGSTW 477 >gi|284173141|ref|ZP_06387110.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus solfataricus 98/2] gi|261600964|gb|ACX90567.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus solfataricus 98/2] Length = 536 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 117/483 (24%), Positives = 225/483 (46%), Gaps = 40/483 (8%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A K++ + + +L++ +S+P++ F +++F+ G +G ELA F +FT+ VW Sbjct: 35 IAIKNKAFENIYISVLEVFESVPVISFFPVVLIFFV-YRIGGYLGIELAVDFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P DL EVS ++RL K L +P+S P + N++ S + +F++ Sbjct: 94 NIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLYIPYSWPRIAANLIPSFADAFFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 SE+ +G + + GIG+ IA Q+ L + + +I ++ LL R ++N Sbjct: 154 VSEVFSIGSSSYHVFGIGTIIAAFTASQEYNLALEGLGVLAILITIFTYLLRR----FAN 209 Query: 269 KFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR-------TLG 321 T Y D+ + R +R+ S N +P K + R + Sbjct: 210 -----YTVSKYGLDTEIKVAKRGRMRIRYTTRMS-NTIAPFVKLSKYVTRIGSRTTISEE 263 Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381 R + P +L + + + +L F + V + + Y++++ +VL+ + Sbjct: 264 ETRRNLPWRYLGIGISVFLLGLLVYGAFSTISSVPKSV----LLYLISN--TPNVLFNL- 316 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV-SC 440 I RV+ + I++ + I +G +I + + P Q A+FPA +FPL++ + Sbjct: 317 --LIDYVRVLFIAIVSLVFSIFLGYFIATHERVEGMLIPIIQAYASFPAPAYFPLLLMAT 374 Query: 441 VSYYHLNPNLWLS-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 +S+ H W + LL T +Y+ ++ G PN + E+ +++ + W+ R Sbjct: 375 ISFIHSVFGSWTNEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWQKLR 434 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASW-----GHIHLRTTGLGAYIAESTEKG 550 Y+I+P FPY + G + AW + E W G+ + G+ IA +T G Sbjct: 435 YVIVPSTFPYIIAGLSSTINSAWGGLAIGEY--WTNIVNGYTLQVSHGIMKNIAVATANG 492 Query: 551 SFP 553 + P Sbjct: 493 NVP 495 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 16/222 (7%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF---LTFTVVYFMNL 126 +R+L ++SL+F+ A R+ +L+PI+ S P + L + F++ Sbjct: 321 VRVLFIAIVSLVFSIFLGYFIATHERVEGMLIPIIQAYASFPAPAYFPLLLMATISFIH- 379 Query: 127 YPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 V G+ E I F S + + +S + + N+P E+ +++ S WQK Y+ Sbjct: 380 ---SVFGSWTNEFYVILLGFISTFYYVFYSYWLGIKNMPNQYWEIMKNYNFSFWQKLRYV 436 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDLLA 240 VP + P ++ + +++ W + E IV G T+ GI IA+A ++ Sbjct: 437 IVPSTFPYIIAGLSSTINSAWGGLAIGEYWTNIVNGYTLQVSHGIMKNIAVATANGNVPL 496 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMI-VWSNKFRLERTTGIYPA 281 + L V+ +Y R M+ + K+ E GIY A Sbjct: 497 AAWDSLIFGIVVIIYSIFFTRKMMDLAREKYVAEE--GIYLA 536 >gi|302348739|ref|YP_003816377.1| ABC transporter, putative [Acidilobus saccharovorans 345-15] gi|302329151|gb|ADL19346.1| ABC transporter, putative [Acidilobus saccharovorans 345-15] Length = 542 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 122/473 (25%), Positives = 221/473 (46%), Gaps = 34/473 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT R+ + +S++ ++ LA KSR V V + ++++S+P++ F +++F++ Sbjct: 17 TTGRVFLTIGLSIVTGWLLGYLAIKSRAFESVYVGLSEVLESVPVISFFPVVLIFFVDRI 76 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G IG ELA F +FT+ VWN+ +YQ+ +P + EV+ + R K L +PF Sbjct: 77 -GGYIGVELAVDFLVFTAVVWNIWMGIYQAFKTLPLPMLEVAENLRYGFIAKMRRLYIPF 135 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 SMP + N++ S + +F++ SE+ +G T + GIGS IA + E L + Y++L Sbjct: 136 SMPRIAANLIPSFADAYFYITVSEVFSIGATSYHVFGIGSLIAKFMNEGMLNYVYYSLLG 195 Query: 248 M----LGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302 + GVIF R W+ K+ L+ P + R + RF Y++ Sbjct: 196 LAMLIAGVIF-----ALRNFANWAVAKYGLDTP----PRSAHPGVRTRWRSLSRF--YAA 244 Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362 ++ + R + + R +QL S +++ + L I ++ + G A Sbjct: 245 ARPLRVITTVTSRPVRAVPLRRVE----RIQL-SERQLDWALRIVGAVLLLLIIYGAAKA 299 Query: 363 SIGYIVNHFTYQDVLYVIWLGCITM----FRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 ++ V T+ +L W + + RV V+ +I+ I + VG ++ F + Sbjct: 300 ALS--VKPSTWNYLLSNTWPIIVGLAYDYARVAVITLISFAIAVFVGYYLAFHRRAEAVF 357 Query: 419 QPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 P Q L+A PA +FPL+ S + L++ L T +YI + G Sbjct: 358 IPLIQSLSALPAPAYFPLLFLATSAILYRAFGGFTNELYVLFLGFVSTFYYIFYAYWMGI 417 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 A P++ E+ + ++ ++ R I++PG PY VTG + AW ++ E Sbjct: 418 KAVPHEVVELMDNLNMGFFKRLRKILIPGTLPYIVTGLTSTIDSAWGGLMIGE 470 >gi|15920813|ref|NP_376482.1| hypothetical protein ST0594 [Sulfolobus tokodaii str. 7] gi|15621597|dbj|BAB65591.1| 544aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 544 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 106/454 (23%), Positives = 200/454 (44%), Gaps = 34/454 (7%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 A + K++ + V ++++ +S+P+ F +++F+ G +G E A +F +FT+ Sbjct: 38 AYASIKNKIFENIYVSLIEVFESVPVFSFFPIVLIFFIYDIGGS-LGVEFAVLFLVFTAV 96 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 WN+ YQ+ +P DL EVS ++RL W L +PFS+P + N++ S + F+ Sbjct: 97 TWNIWMGEYQAFKTVPEDLLEVSENYRLKFWGTMTKLYIPFSIPRIAANLIPSFADALFY 156 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 + SE+ VG + GIG+ IA + E + LY + +L + + LL R Sbjct: 157 ITVSEVFAVGTHTYQVFGIGTVIANLVSEGEYTDALYG-IAVLAIFTIAITLLLREF--- 212 Query: 267 SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK---------KLC 317 +K+ +ER Y D+ + RK + F GYS+ S LS K +L Sbjct: 213 -SKYSVER----YGLDTEI--SIRKRGRIHF-GYST-RLVSALSYPAKLAKVFPTPIRLR 263 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 + + S +L F I + + GY+++ D++ Sbjct: 264 SNIKEEDEEKEHKYFWKISGIVAGVLLLAFILYGAISTIISVPLSTWGYLISTLP-SDLI 322 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL- 436 +++ RV ++ +++ + I VG ++ + P Q +A PA ++PL Sbjct: 323 SILF----DYIRVGIIALLSFVFAIFVGYYLTTHEKTEKIVIPIIQAYSAIPAPAYYPLF 378 Query: 437 VVSCVSYYH-----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 ++ + + H ++ L T +Y+ ++ G P + E+ ++ W Sbjct: 379 LLVTLPFIHSIFGPFTNEFYVLFLGFISTFYYVFYSFWIGVKNLPQQYWEIMKNYDFKFW 438 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 + RY+I+PG FPY + G + AW + E Sbjct: 439 QKLRYVIIPGTFPYIIAGLSSTINSAWGGLAIGE 472 >gi|126459292|ref|YP_001055570.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum calidifontis JCM 11548] gi|126249013|gb|ABO08104.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum calidifontis JCM 11548] Length = 453 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/189 (39%), Positives = 116/189 (61%), Gaps = 5/189 (2%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T RM +V+S+ + AKSRR VL+P LD+MQS+PILGF + F++ + Sbjct: 14 TYARMALGLVVSIAVAYALGYAMAKSRRAEAVLLPFLDVMQSVPILGFFPVALFVFVSFF 73 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P IGAELAA+F IFTS WN+ F +YQ+L +PR+ E++R + L+ + ++ +PF Sbjct: 74 PR--IGAELAAVFLIFTSMAWNIIFGVYQALKTLPREYLEMARLY-LNERLEIAHVVIPF 130 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-LAILYAML 246 ++ L +N +S + +FF+ ASE+I +G T I L GIGS + A ++ DL A + + Sbjct: 131 TLRSLYYNAAISWANAFFFITASEVITLG-TEIHLFGIGSLVVKAFEDGDLATAYVGIAV 189 Query: 247 TMLGVIFLY 255 +LG + LY Sbjct: 190 ALLGNVALY 198 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 93/190 (48%), Gaps = 14/190 (7%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +L ++ RV+ +I+I++ + + + +P + P +L++ P +PL+ + Sbjct: 263 YLSLFSLARVLAVILISAAVGLATTALVVEKPSREVAVFPAVAVLSSIPPVFLYPLLAAF 322 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + + +L++ Y + N +A P D +A ++ I+GW + +I++P Sbjct: 323 I-----KGEILVLVLLLPAAALYTVINTLAAWRDVPRD---LAKAYQISGWLYLWHILIP 374 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 PY TG +T GGAWN +V+E + +GLG+Y+A + +G + V Sbjct: 375 AALPYIATGLLTTWGGAWNGLVVAEPFA------DVSGLGSYMAHAAGRGDVNALFASVA 428 Query: 561 IMCCFVLALN 570 +M V+A N Sbjct: 429 VMTAIVVATN 438 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 9/93 (9%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 ++PRDL ++++++SGW W++ +P ++P + ++ + G W +VV + Sbjct: 351 DVPRDL---AKAYQISGWLYLWHILIPAALPYIATGLLTTWGGAW------NGLVVAEPF 401 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + G+GSY+A A D+ A+ ++ M ++ Sbjct: 402 ADVSGLGSYMAHAAGRGDVNALFASVAVMTAIV 434 >gi|325525220|gb|EGD03088.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 137 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/129 (48%), Positives = 93/129 (72%), Gaps = 4/129 (3%) Query: 17 PNIFDLLAFVLVIGIINILLHGI--QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 P DL A ++V+G + LL GI ++ P + I+L +LP Y RT RM + Sbjct: 11 PGWRDLAAMLIVVGFL--LLAGISARQMGGPLAVAHPPAISLSPAALPGYTLRTVARMFA 68 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++ S++FTFVYAT AA+SRR VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GA Sbjct: 69 ALLASIVFTFVYATTAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGA 128 Query: 135 ELAAIFAIF 143 E AAIFAIF Sbjct: 129 ECAAIFAIF 137 >gi|16082188|ref|NP_394633.1| hypothetical protein Ta1177 [Thermoplasma acidophilum DSM 1728] gi|10640488|emb|CAC12302.1| hypothetical membrane protein [Thermoplasma acidophilum] Length = 541 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 113/477 (23%), Positives = 229/477 (48%), Gaps = 40/477 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L ++IS++ + A A K + + + I+++ +S+P++ F ++ F+ Sbjct: 14 TAGRVLGLILISIVTGWFLAYAAIKGKIFENIYISIIEVFESVPVISFFPIVLIIFVTRI 73 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +G E+AA F +FT+ VWN+ YQ+ +PR++ EV+ ++++S K + +PF Sbjct: 74 GGP-LGVEMAADFLVFTAVVWNIWMGEYQAFKTVPREMLEVAENYQMSFLTKMRRIFIPF 132 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI-ALAIKEQDLLAILYAML 246 S P + N+ S+S G+F++ SE+ VG GIG+ + +LA Q + ++Y L Sbjct: 133 SYPRIAANLFPSVSDGFFYITVSEVFSVGIHTYQTFGIGTVLDSLAASGQ--IRLIYVAL 190 Query: 247 TMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 +L + + + R ++ +K+ ++ I + ++T R + + N Sbjct: 191 GILAAVIIVIIIGLREFSRYAVSKYTVDTDAPIIRRGRLNV---KQTT--RLLSVVARNP 245 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQ-LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 S L+ + RTL PE F + +++S + + ++ G+ I + ++ Sbjct: 246 LSRLAGYYR--SRTLS----RPPEVFEKHEKRKEKISRYISVAIGVIILGL---ILYSAV 296 Query: 365 GYIVN----------HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 IV+ + T + +LY+++ RV V++ I+ +I I +G ++ Sbjct: 297 TLIVSVPHSEWGRLFNLTPKIMLYLLY----DYLRVGVILAISFVISIFLGYYLAMHSRA 352 Query: 415 SSKIQPFAQLLAAFPANVFFPLV-VSCVSYYH-----LNPNLWLSLLMIFGTQWYILFNV 468 P Q L+A+P ++FP + + ++ H +++ L T +YI ++ Sbjct: 353 EGIGVPIIQTLSAYPPPIYFPFIFAASFAFIHGVFGPFTDEVYVLSLGFVSTFYYIFYSF 412 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 G A P ++ EV + ++ + R IILPG FPY ++G + AW ++ E Sbjct: 413 WMGVKALPAEYFEVMKNLNMGYFSRMRSIILPGTFPYLISGISSTINSAWGGLMIGE 469 >gi|58040918|ref|YP_192882.1| transport protein [Gluconobacter oxydans 621H] gi|58003332|gb|AAW62226.1| Transport protein [Gluconobacter oxydans 621H] Length = 547 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 121/528 (22%), Positives = 226/528 (42%), Gaps = 52/528 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 A T L ++ +++I + + + + A + R L+P L + +++P LG + Sbjct: 61 DMAGLTVLHVILSLLIVVAASLLLSGAACQWPRFRAFLIPALSVARAVPGLGLIGILAAL 120 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F L + +S +W + ++ + +P L+EV+ R++GWQ+FW Sbjct: 121 F---------PPTLTIMLVAASSMIWRIVTAVLDAEDTLPPALDEVATGLRMTGWQRFWR 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 L +P ++P + M +M W ++++E +++ + G G+ A+ + L I+ Sbjct: 172 LQMPVAVPLTTFRAMQTMPAFWVRLLSAEGLMMLMSHQATGGCGAAALQAMLDHHPLRIV 231 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER--TTGIYPADSWVLYLFRKTNFLRFIGY 300 +L +I + DQ L RPM+ W+ ++R E P SW+L ++R+T + + Sbjct: 232 EVSGIILLLILVIDQALMRPMVGWAQRYRPEGPFEERARP-QSWLLTIWRRTKLMLW--- 287 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 LS V +G R P + L R L VV + A Sbjct: 288 --------LSGGVSDALVWIGNWRLGRPRSILP--ERHRTVRELPEALLPVVSLFLLVYA 337 Query: 361 WQSIGYI--VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 G + V + VL T+ V +++ ++W+P+G+ I + Sbjct: 338 VYHAGLLGQVPADLAESVL--------TLSHVCGTLLLCVLVWVPLGLVISEHGSSLRNV 389 Query: 419 QPFAQLLAA-FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 A + FPA + +PL C +P +L+ G W + V+ A A P+ Sbjct: 390 CRMAVMACGLFPAVLLYPL---CRELGLDSP----VILLFLGAHWLVGIVVLDAAKAIPS 442 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE--VASWGHIHLR 535 ++VA+ + G WR ++LP I P G +TA WNA +V+E V S Sbjct: 443 GLRQVAAGLRLRGVLLWRRLLLPAIAPELCGGLLTAVVPVWNAVMVAEAFVPS------- 495 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 +GLGA + G+ +L ++++ + L+R + PL + + Sbjct: 496 DSGLGAALLSEALSGAVAAQILALMLLTLLSMLLDRLVLQPLAVNAAQ 543 >gi|27877096|dbj|BAC55866.1| hypothetical protein [Acidianus brierleyi] Length = 537 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 213/461 (46%), Gaps = 54/461 (11%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +A K+R + + I ++++S+P++ F +++F+ G +G ELA +F +FT+ VW Sbjct: 35 IAIKNRIFENIYISISEVLESVPVITFFPVVLIFFV-FEIGGSLGVELAVLFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ +P +L EVS +++L K L +PFS+P + N++ S + F++ Sbjct: 94 NIWMGIYQAFKTVPENLLEVSENYKLGFLDKMIKLYIPFSIPRIAANLIPSFADALFYIS 153 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 SE+ VG + GIG+ I+ + LY +L +L + L R Sbjct: 154 VSEVFSVGVHTYQVFGIGTLISEYTAMGEYTNALY-LLLVLAIFTTSITFLLREF----A 208 Query: 269 KFRLERTTGIYPADSWVLYLFRKTNFLR---FIGYSSWNFFSPLSNNVKKLCRTLGVIRF 325 F ++R Y D+ V ++ N R +GYS+ S KL + + R Sbjct: 209 AFSVQR----YGLDTEV----KENNMRRGRFRVGYSAR--LSSAKGPFTKLAKYVTRPR- 257 Query: 326 HFPENFLQLCSNQRVS-------------YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 P + + S +++ ++L F VV V+ W Y+ + T Sbjct: 258 --PIDIDEEESKKKMPWGKIGAGIGFLFLFLLAYSAFIVVKNVSAS-TWY---YLFS--T 309 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ-PFAQLLAAFPAN 431 D L I + I RV ++ +I+ +I I G ++ + H + +I P Q +AAFPA Sbjct: 310 VPDDLIQIGMDYI---RVAIIALISFVIAIFSGYFLA-KDHKAERIAIPIIQSIAAFPAP 365 Query: 432 VFFPLVVSCVSYYHLNP-------NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 +FPL+ +Y +L+ ++ L T +YI ++ G P+++ EV Sbjct: 366 AYFPLLFGA-TYPYLSKILGGYTDEFYVLFLGFISTFYYIFYSYWLGVKNMPSEYWEVMD 424 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 + ++ W+ R +++P FPY + G + AW + E Sbjct: 425 NLNMGFWQRLRKVVIPSAFPYIIAGLSSTVNSAWGGLAIGE 465 >gi|167010889|ref|ZP_02275820.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. holarctica FSC200] Length = 132 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 49/120 (40%), Positives = 72/120 (60%) Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 GT WY+LFNVI+G S P + E+ SFH+ G +WW +P +FPY V G I+A GGAW Sbjct: 3 GTSWYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGAW 62 Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 N++I +E+ WG ++ G+GA ++ +T + L V+ +C V F+W PLY Sbjct: 63 NSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLQDAALAVVALCSLVALCIIFIWKPLY 122 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 61/120 (50%) Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 T W + F++ N+P ++ E+++SF L G + ++ +P P +V ++ + G Sbjct: 2 TGTSWYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGA 61 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 W +A+E+++ G I + GIG+ ++ L A++ + ++ L +++P+ Sbjct: 62 WNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLQDAALAVVALCSLVALCIIFIWKPL 121 >gi|145590546|ref|YP_001152548.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum arsenaticum DSM 13514] gi|145282314|gb|ABP49896.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum arsenaticum DSM 13514] Length = 468 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 105/168 (62%), Gaps = 4/168 (2%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM A+++++ + +SRR+ ++P+LD++QS+PILGF + +F+ L P Sbjct: 27 RMAVALLLTVAVAYAIGYAMFRSRRVETFMLPLLDVLQSVPILGFFPLALYFFIALLPAA 86 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 GAELAAIF IFTS WN+ FS+YQS +PR+L ++SR + L+ ++ +P ++ Sbjct: 87 --GAELAAIFLIFTSMAWNIIFSVYQSFKTLPRELLDMSRVY-LNERLALAHVFIPAALR 143 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +N+ +S + +FF+ ASE+I +G T I L GIGS + E D+ Sbjct: 144 GVYYNIPISWANAFFFITASEVITLG-TEIKLFGIGSLVVKWFDEGDV 190 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 14/193 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ RV+ + I++++ + + P + + + L+++ PA +PL+ + V Sbjct: 283 TLVRVLATLAISALVALLTLHAVVRAPRLEAGVLLGVLLISSVPAVFLYPLLGALVRGEA 342 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L G Y + N +A P D + ++ I G + +++P PY Sbjct: 343 LSVTLLLP-----GAVVYTVLNAVAAWRDVPQDLVK---AYQIRGRLYLTQVLIPASMPY 394 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG +TA GGAWNASIV+E ++H GLG ++ ++G +V V M Sbjct: 395 LITGLLTAWGGAWNASIVAE--PLANVH----GLGGLTTQAADRGDISLLVATVATMTLI 448 Query: 566 VLALNRFLWHPLY 578 V+A+NR +W LY Sbjct: 449 VVAVNRVVWRRLY 461 >gi|119872760|ref|YP_930767.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum islandicum DSM 4184] gi|119674168|gb|ABL88424.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum islandicum DSM 4184] Length = 459 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 8/187 (4%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I + V +L R L +LS + I+ + YA KSRR+ VL+P+LD++QS+PIL Sbjct: 4 IAIAVLALLATFGRMALALLSTVAIA--YALAYAMY--KSRRVEAVLLPLLDVLQSVPIL 59 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 GF + F+ + P IGAELAA F IFTS WN+ F +YQS +PR+L E+S+ + Sbjct: 60 GFFPIALYVFVFIMPQ--IGAELAAQFLIFTSMAWNIIFGIYQSFKTLPRELIEMSQVY- 116 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ ++ +P ++ + +N +S S +FF+ ASE+I +G T + L GIGS++ A Sbjct: 117 LTERLALAHVFLPVALRSVYYNAAVSWSNAFFFITASEVITLG-TEVKLFGIGSFVVDAF 175 Query: 234 KEQDLLA 240 ++ D A Sbjct: 176 EKGDTTA 182 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 23/218 (10%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W+ + Y+VN DVL T+ RVV+ + I+++ + + P + + + Sbjct: 257 WELLSYLVNSLI--DVLP-------TLARVVMTLTISALAGLLSVALVVKNPQLETTVFI 307 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 +L++ PA +PL+ S V L+ L L G+ Y + N +A P D Sbjct: 308 ALSILSSIPAVFLYPLIGSVVRGEALSVALLLP-----GSIVYTVLNAVAAWRDVPKDL- 361 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 A ++ I G ++ +I++P PY +TG +TA GGAWNA+IV+E S +++ GLG Sbjct: 362 --ARAYGIGGAVYFIHILIPATLPYLITGLLTAWGGAWNATIVAE--SLANVN----GLG 413 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 AY+A+ + G+ P +++ V++M V+ +N+ +W LY Sbjct: 414 AYMAQVAQLGNIPALIISVIVMSGVVITVNKLVWKRLY 451 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/196 (20%), Positives = 94/196 (47%), Gaps = 22/196 (11%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R++ + IS L + L K+ +L + L I+ SIP + LY Sbjct: 273 TLARVVMTLTISALAGLLSVALVVKNPQLETTVFIALSILSSIPA-----------VFLY 321 Query: 128 P--GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P G V+ E ++ + + + + ++P+DL +R++ + G F ++ + Sbjct: 322 PLIGSVVRGEALSVALLLPGSIVYTVLNAVAAWRDVPKDL---ARAYGIGGAVYFIHILI 378 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P L+ ++ + G W +V +++ + G+G+Y+A + ++ A++ ++ Sbjct: 379 PATLPYLITGLLTAWGGAW------NATIVAESLANVNGLGAYMAQVAQLGNIPALIISV 432 Query: 246 LTMLGVIFLYDQLLFR 261 + M GV+ ++L+++ Sbjct: 433 IVMSGVVITVNKLVWK 448 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 4/167 (2%) Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYY--HLNPNLWLSLLMIFGTQWYILFNVIA 470 + + + P +L + P FFP+ + + + L L+ W I+F + Sbjct: 41 RVEAVLLPLLDVLQSVPILGFFPIALYVFVFIMPQIGAELAAQFLIFTSMAWNIIFGIYQ 100 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 P + E+ S ++T ++ LP A + A+ SEV + G Sbjct: 101 SFKTLPRELIEM-SQVYLTERLALAHVFLPVALRSVYYNAAVSWSNAFFFITASEVITLG 159 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 ++ G+G+++ ++ EKG +G+ I +AL FLW L Sbjct: 160 T-EVKLFGIGSFVVDAFEKGDTTAAYVGIAIGTAGNIALYLFLWRRL 205 >gi|305662628|ref|YP_003858916.1| binding-protein-dependent transport systems inner membrane component [Ignisphaera aggregans DSM 17230] gi|304377197|gb|ADM27036.1| binding-protein-dependent transport systems inner membrane component [Ignisphaera aggregans DSM 17230] Length = 224 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 113/189 (59%), Gaps = 2/189 (1%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + LR+ SA ++S+ V A+S+ L ++L PI+D++QSIP+LGF +++ +N++ Sbjct: 13 SLLRLFSAYILSISVALVIGISMARSKVLEVILYPIIDVLQSIPVLGFFPAVLLFLVNIF 72 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P IG E+A+I IFT QVWN+ +Y ++ ++P D +S + L+ + + +P Sbjct: 73 PPP-IGVEMASIILIFTGQVWNLILGVYSAIKSLPSDFILLSEVYSLNTASRILKIYIPA 131 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++ + N ++S +GG FF+ A E+I G+T L GIG+ I + D + + A++ Sbjct: 132 ALFAIASNSVVSWAGGLFFLTACEIISFGNTEYRLRGIGTTIIELASKGDYIDMYIAIML 191 Query: 248 MLGV-IFLY 255 +L + IFLY Sbjct: 192 LLAISIFLY 200 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 9/189 (4%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQ----PFAQLLAAFPANVFFPLVVSCVSYYHLNP--NL 450 A I+ I V + IG S ++ P +L + P FFP V+ + P Sbjct: 20 AYILSISVALVIGISMARSKVLEVILYPIIDVLQSIPVLGFFPAVLLFLVNIFPPPIGVE 79 Query: 451 WLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFPYYVT 508 S+++IF G W ++ V + + P+DF ++ + + T R + I +F Sbjct: 80 MASIILIFTGQVWNLILGVYSAIKSLPSDFILLSEVYSLNTASRILKIYIPAALFAIASN 139 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 ++ GG + + E+ S+G+ R G+G I E KG + ++ + ++++ + Sbjct: 140 SVVSWAGGLFFLT-ACEIISFGNTEYRLRGIGTTIIELASKGDYIDMYIAIMLLLAISIF 198 Query: 569 LNRFLWHPL 577 L FLW+PL Sbjct: 199 LYIFLWNPL 207 >gi|18312383|ref|NP_559050.1| sulfonate transport permease protein, putative [Pyrobaculum aerophilum str. IM2] gi|18159835|gb|AAL63232.1| sulfonate transport permease protein, putative [Pyrobaculum aerophilum str. IM2] Length = 453 Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 106/167 (63%), Gaps = 4/167 (2%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM A++I++ + A KSRR+ ++P+LD++QS+PILGF + F+ L+P Sbjct: 12 RMAIALLITIAVAYAVAYAMHKSRRVESFVLPVLDVLQSVPILGFFPIALYVFIYLFP-- 69 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V+GAELAAIF IFTS WN+ FS+YQS +P + +++R + L+ + ++ +P ++ Sbjct: 70 VVGAELAAIFLIFTSMAWNIIFSVYQSFKTMPSEYVDMARIY-LNERLELAHVYIPAALR 128 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 G+ +N+ +S + +FF+ ASE+I +G T I L GIGS + A D Sbjct: 129 GIYYNIPVSWANAFFFITASEVITLG-TEIRLFGIGSLVVEAFNAGD 174 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 14/193 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV ++ I+ + + +P + I LL++ PA +PL+ + V Sbjct: 268 SLLRVVAVLAISGAAGLAALYSVVKKPGWETAILLGTSLLSSIPAVFLYPLLGAVV---- 323 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L LL++ G Y + N IA P D A ++ I G ++ +I++P PY Sbjct: 324 -KGELLAILLLMPGALIYSVLNTIAAWRDVPQDL---ARAYQIGGAAYFLHILVPASLPY 379 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG +T GGAWNA+IV+E + H GLG Y+A++ + G P ++ V+ M Sbjct: 380 LITGMLTTWGGAWNAAIVAEPLASVH------GLGRYMADAADAGDMPRLLASVITMTAL 433 Query: 566 VLALNRFLWHPLY 578 V+A+N+F+W LY Sbjct: 434 VVAVNKFVWKRLY 446 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 75/148 (50%), Gaps = 11/148 (7%) Query: 126 LYP--GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 LYP G V+ EL AI + + + + ++P+DL +R++++ G F ++ Sbjct: 315 LYPLLGAVVKGELLAILLLMPGALIYSVLNTIAAWRDVPQDL---ARAYQIGGAAYFLHI 371 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 VP S+P L+ M+ + G W +V + + + G+G Y+A A D+ +L Sbjct: 372 LVPASLPYLITGMLTTWGGAW------NAAIVAEPLASVHGLGRYMADAADAGDMPRLLA 425 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 +++TM ++ ++ +++ + + K+R Sbjct: 426 SVITMTALVVAVNKFVWKRLYEEAAKWR 453 >gi|171184672|ref|YP_001793591.1| binding-protein-dependent transport systems inner membrane component [Thermoproteus neutrophilus V24Sta] gi|170933884|gb|ACB39145.1| binding-protein-dependent transport systems inner membrane component [Thermoproteus neutrophilus V24Sta] Length = 458 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 95/149 (63%), Gaps = 4/149 (2%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +SRR+ V++P+LD+MQS+P+LGF + F+ P IGAELAA F IFTS WNM Sbjct: 39 RSRRVEAVMLPVLDVMQSVPVLGFFPIALYIFVYFVPW--IGAELAAQFLIFTSMAWNMI 96 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 F +YQ+ +PR+L ++SR + L+ + ++ +P ++ + +N +S + +FF+ ASE Sbjct: 97 FGIYQAFKTLPRELLDMSRVY-LNERLELAHVFLPAALRSVYYNAAVSWANAFFFITASE 155 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 +I +G T + L GIGS++ A + D A Sbjct: 156 VITLG-TEVKLFGIGSFVVDAFERGDTTA 183 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 14/193 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T RV+ + I++ + I + +P + I L++ PA +PL+ S Sbjct: 272 TSARVLAALGISAAVGIAAVALVVRKPEAETPILLALSALSSVPAVFLYPLIGSVARGEA 331 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L L L G+ Y N +A P DF + ++ + G ++ +++LP PY Sbjct: 332 LAVALLLP-----GSIVYTALNAVAAWRDVPRDFVK---AYGVRGAVYYVHVLLPAALPY 383 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 VTG +TA GGAWNA+IV+E + GLGAY+ ++ + G+ P + V +M Sbjct: 384 LVTGLLTAWGGAWNATIVAEPLA------DVAGLGAYMTQAAQAGNTPALAASVAVMSAV 437 Query: 566 VLALNRFLWHPLY 578 V+ +N+ +W LY Sbjct: 438 VIVVNKLVWRRLY 450 >gi|325519230|gb|EGC98685.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 79 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 43/78 (55%), Positives = 52/78 (66%) Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 AITA GGAWNASIVSE WG + GLGAYIA++T G FP+++LG+ +M FV Sbjct: 1 AITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTADGDFPKIILGIAVMSLFVTLF 60 Query: 570 NRFLWHPLYLYGTRCLRL 587 NR LW P+Y Y LRL Sbjct: 61 NRLLWRPMYAYAESRLRL 78 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + + G W + SE + G T I G+G+YIA + D I+ + M + L++ Sbjct: 2 ITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTADGDFPKIILGIAVMSLFVTLFN 61 Query: 257 QLLFRPMIVWS-NKFRLE 273 +LL+RPM ++ ++ RL+ Sbjct: 62 RLLWRPMYAYAESRLRLD 79 >gi|48478103|ref|YP_023809.1| sugar ABC transporter 1, permease protein [Picrophilus torridus DSM 9790] gi|48430751|gb|AAT43616.1| sugar ABC transporter 1, permease protein [Picrophilus torridus DSM 9790] Length = 537 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 94/160 (58%), Gaps = 1/160 (0%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R+L ++S++ + A A KS+ + + ++++ +S+P++ F +V F+ Sbjct: 14 TTIRVLGLTLLSIVTGWFLAYGAIKSKYFENIYISVIEVFESVPVISFFPIVLVIFITRI 73 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +G ELAA F +FT+ VWN+ + YQ+ +PR++EEV + L + K L +PF Sbjct: 74 GGP-LGVELAADFLVFTAVVWNIWMAEYQAFKTVPREMEEVVDNIDLGFFGKLSKLYIPF 132 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 S+P + N+ S+S G+F++ SE+I VG GIG+ Sbjct: 133 SIPRIAANLFPSVSDGFFYITVSEVIEVGTHTYQTFGIGT 172 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 13/174 (7%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV----VSCVSYY 444 RV +++I+ I I +G ++ S P Q L+A+PA ++FP V + +S + Sbjct: 323 RVATILLISLAIAIFLGYYLAVNKRAESVGIPIIQTLSAYPAPIYFPFVFIFTLPFISKF 382 Query: 445 H--LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 ++ + T +Y+ ++ G A P+++ E+ + ++ ++ RYII+P Sbjct: 383 FGPYTDEFYVLAIGFISTFYYVFYSFWMGVKALPSEYWELMKNMNMGYFKKMRYIIIPAA 442 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRT-----TGLGAYIAESTEKGS 551 FPY ++G + AW ++ E W +I+ TGL I +T G+ Sbjct: 443 FPYLISGISSTINSAWGGLMIGEY--WPNIYGDKSLYVHTGLMKLIDVATANGN 494 >gi|307596035|ref|YP_003902352.1| binding-protein-dependent transport systems inner membrane component [Vulcanisaeta distributa DSM 14429] gi|307551236|gb|ADN51301.1| binding-protein-dependent transport systems inner membrane component [Vulcanisaeta distributa DSM 14429] Length = 554 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 17/189 (8%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 AAKS V + I ++++P++ F +V+F+ G IG ELA F +FT+ VWN Sbjct: 39 AAKSGLFERVFLSITQTLEAVPVITFFPIVLVFFVKSI-GGYIGTELAVDFLVFTAVVWN 97 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + Y+++ P+ LE+ + F LS W +F YL +P +MP + N+++S + F++V Sbjct: 98 IWVGEYEAIKTAPQSLEDAAEMFNLSFWGRFRYLYIPVTMPRVAGNVLVSFADALFYIVV 157 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDL------LAILYAMLT--MLGVIFLYDQLLFR 261 SE+I +G T + GIG+ IA + + L IL M+T + GV+ R Sbjct: 158 SEVITLGTTQYSVFGIGALIASWTSKGEWVPAFVGLGILVVMVTAVLFGVL--------R 209 Query: 262 PMIVWSNKF 270 P + W+ K+ Sbjct: 210 PFVNWAVKY 218 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 11/207 (5%) Query: 391 VVLIIIASIIW-IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY----- 444 + L+ ASII IP+ + + + + P + LA+ P + + PL+ + Y Sbjct: 343 IALVTAASIITAIPINYLMVTHRRVEAILLPILEDLASIPVSAYLPLIAIPFTTYVATTL 402 Query: 445 --HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 H++ L + L+ T WY+++N+ G P +VA + + W+ R + +PG Sbjct: 403 GLHVSLELLVFLVAYLSTAWYVIYNMYVGMKTIPRSLWDVAENLRLGTWQKLRRLAIPGA 462 Query: 503 FPYYVTGAITACGGAWNASIVSEVASW--GHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P +TG + G W V+E G +++ G A + T G+ + L Sbjct: 463 MPATITGLASTIGSTWGGLEVAEYIQGLNGQVYM-VHGYTALMDYYTAVGNVVGLEAMSL 521 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 I+ V+ L+ FLW L+ RL Sbjct: 522 ILAINVILLSVFLWRRLFKLARERYRL 548 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 3/128 (2%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP---GKVIGAELAAIFAIFTS 145 L RR+ +L+PIL+ + SIP+ +L + F G + EL + S Sbjct: 360 LMVTHRRVEAILLPILEDLASIPVSAYLPLIAIPFTTYVATTLGLHVSLELLVFLVAYLS 419 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 W + ++MY + IPR L +V+ + RL WQK L +P +MP + + ++ W Sbjct: 420 TAWYVIYNMYVGMKTIPRSLWDVAENLRLGTWQKLRRLAIPGAMPATITGLASTIGSTWG 479 Query: 206 FVVASEMI 213 + +E I Sbjct: 480 GLEVAEYI 487 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 12/199 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ----PFAQLLAAFPANVFF 434 + +L + F V L I+ I+ +G ++G+ S + Q L A P FF Sbjct: 9 IAFLATLATFGRVTLTIVLGIV---LGWFLGYAAAKSGLFERVFLSITQTLEAVPVITFF 65 Query: 435 PLV----VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 P+V V + Y + L + L+ W I P ++ A F+++ Sbjct: 66 PIVLVFFVKSIGGY-IGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMFNLSF 124 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W +RY+ +P P + + A +VSEV + G G+GA IA T KG Sbjct: 125 WGRFRYLYIPVTMPRVAGNVLVSFADALFYIVVSEVITLGTTQYSVFGIGALIASWTSKG 184 Query: 551 SFPEVVLGVLIMCCFVLAL 569 + +G+ I+ V A+ Sbjct: 185 EWVPAFVGLGILVVMVTAV 203 >gi|255513790|gb|EET90055.1| binding-protein-dependent transport systems inner membrane component [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 528 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LRM +A+ IS++ + AA+SR V++PILDI Q++PIL F F + + PG Sbjct: 19 LRMFAALFISVIVSIFVGIWAARSRGAERVIIPILDIFQTLPILAFFPFVIFVVVATLPG 78 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 +IG A IF I TS VWN+TF +Y+S+ +P++ EV+ +R+ + + +P +M Sbjct: 79 -MIGINAAVIFLIVTSMVWNITFGVYESIKAMPKEFLEVASLYRMGLLDRLRRIFIPATM 137 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGD 217 P +V ++S S G F++V SE+ G+ Sbjct: 138 PRVVEQSVLSWSIGLFYLVTSEIFSTGN 165 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++A+ PA + P++V + Y L+ L ++ WY++F++IA EV Sbjct: 359 QVVASIPATILLPVLVVALEGYPLHSELVAIVVYFLSGIWYVIFSIIASTRTLSPSVLEV 418 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE------VASWGHIHLRT 536 F I G +R I L + P +TGA+T WNASIV+E + + I Sbjct: 419 KKLFGIKGTTAFRKIYLMAMLPGVITGAVTGIAAEWNASIVAEYFTSTAIGNGAVITAVH 478 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 TG+G + S G+ +++ +L + ++ +N+F+W Y Sbjct: 479 TGIGRLLDVSLGTGNLTLMLIALLNLTVMIILINKFVWKRFY 520 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 10/165 (6%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + ++ SIP L VV YP + +EL AI F S +W + FS+ S + Sbjct: 357 VFQVVASIPATILLPVLVVALEG-YP---LHSELVAIVVYFLSGIWYVIFSIIASTRTLS 412 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE---MIVVGDTV 219 + EV + F + G F + + +PG++ + ++ W + +E +G+ Sbjct: 413 PSVLEVKKLFGIKGTTAFRKIYLMAMLPGVITGAVTGIAAEWNASIVAEYFTSTAIGNGA 472 Query: 220 IPLP---GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + GIG + +++ +L +L A+L + +I L ++ +++ Sbjct: 473 VITAVHTGIGRLLDVSLGTGNLTLMLIALLNLTVMIILINKFVWK 517 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 77/203 (37%), Gaps = 4/203 (1%) Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP---ANVFFPLVVSCVSYY 444 R+ + I+ I+ I VGIW I P + P F VV Sbjct: 19 LRMFAALFISVIVSIFVGIWAARSRGAERVIIPILDIFQTLPILAFFPFVIFVVVATLPG 78 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + N + L++ W I F V A P +F EVAS + + R I +P P Sbjct: 79 MIGINAAVIFLIVTSMVWNITFGVYESIKAMPKEFLEVASLYRMGLLDRLRRIFIPATMP 138 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGAYIAESTEKGSFPEVVLGVLIMC 563 V ++ + + SE+ S G+ + G+G I + G+ L + + Sbjct: 139 RVVEQSVLSWSIGLFYLVTSEIFSTGNANYAVKYGIGVAITKFALSGNTEAYALALAVFI 198 Query: 564 CFVLALNRFLWHPLYLYGTRCLR 586 FV+A + PL +R ++ Sbjct: 199 AFVIATRFLFFMPLERRYSRYMK 221 >gi|70606098|ref|YP_254968.1| ABC transporter [Sulfolobus acidocaldarius DSM 639] gi|68566746|gb|AAY79675.1| ABC transporter [Sulfolobus acidocaldarius DSM 639] Length = 543 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 LA KS + + V +++I +S+P+ FL +++F+ G +G +LA +F +FT+ VW Sbjct: 35 LAIKSHVVENIYVSLIEIFESVPVFSFLPIVLIFFVFTIGGN-LGIQLAVLFLVFTAVVW 93 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ +YQ+ IP+D+ EVS ++R S KF L +P+SMP + N+ S F++ Sbjct: 94 NIWMGIYQAYKTIPQDMLEVSENYRFSLMDKFSKLYIPYSMPRIASNLFPSFVNALFYIT 153 Query: 209 ASEMIVVGDTVIPLPGIGSYI 229 SE+ +G++ + GIGS I Sbjct: 154 VSEVFSIGNSQYQVFGIGSLI 174 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 11/178 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV----VS 439 + RV V+ +I+ +I I +G +I I I P Q++AA PA V+FP + +S Sbjct: 324 AVDYIRVAVVTLISLLITIFLGYFIVVHKRIERVILPLIQIVAAIPAPVYFPFLYAFSIS 383 Query: 440 CVSYY--HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 +S+ ++ LL T +Y F+ G ++ P F E+ ++ ++ W+ R I Sbjct: 384 FISHLFGAFTNEFYVLLLGFLSTFYYSFFSYYIGVTSMPVQFWEIMKNYELSFWQKLRQI 443 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSE----VASWGHIHLRTTGLGAYIAESTEKGS 551 ILP PY +TG + W ++E + ++++R TGL I T +G Sbjct: 444 ILPSTMPYLITGITSTVNSTWGGLAIAEYWPNITQDHNLYVR-TGLMKDIVLFTNQGE 500 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 4/138 (2%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 +R+ +ISLL T +R+ V++P++ I+ +IP + F + ++ + Sbjct: 328 IRVAVVTLISLLITIFLGYFIVVHKRIERVILPLIQIVAAIPAPVYFPFLYAFSIS-FIS 386 Query: 130 KVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + GA E + F S + FS Y + ++P E+ +++ LS WQK + +P Sbjct: 387 HLFGAFTNEFYVLLLGFLSTFYYSFFSYYIGVTSMPVQFWEIMKNYELSFWQKLRQIILP 446 Query: 187 FSMPGLVWNMMMSMSGGW 204 +MP L+ + +++ W Sbjct: 447 STMPYLITGITSTVNSTW 464 >gi|257075954|ref|ZP_05570315.1| sugar ABC transporter 1, permease protein [Ferroplasma acidarmanus fer1] Length = 540 Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 100/181 (55%), Gaps = 1/181 (0%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R++ +++S+L + A + KS+ + + ++++ +SIP++ F +V F+ + Sbjct: 14 TAGRVIGLILLSILTGWFLAYASIKSKFFENIYIILIEVFESIPVITFFPVVLVIFIT-H 72 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +G ELAA F +FT+ VWN+ YQ+ +PR++ EV + R + + YL +PF Sbjct: 73 VGGTLGVELAADFLVFTAVVWNIWMGEYQAFKTVPREMVEVVENSRFGLFSRLRYLYIPF 132 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+P + N+ S+S G+F++ SE+ VG GIGS + + L I A+L Sbjct: 133 SVPRITANLFPSVSNGFFYITVSEVFEVGVHTYQTFGIGSVLDTFVAGAQLFNIEMALLI 192 Query: 248 M 248 + Sbjct: 193 L 193 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 13/189 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN- 447 RV +++++ +I I +G ++ P Q L+A+PA ++FP + + L+ Sbjct: 326 RVGSILLVSMVIAIFLGYYLAVNKRAEKYWIPIIQSLSAYPAPIYFPFLFILTEPFMLSL 385 Query: 448 -----PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 L++ L T +Y+ ++ G A P+++ E+ + + ++ R +I+P Sbjct: 386 FGGFTNELYVLSLGFVSTFYYVFYSFWMGVKAMPSEYWEITKNLKLGYFKKMRKVIIPST 445 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLR-----TTGLGAYIAESTEKGSFPEVVL 557 FPY ++G + AW ++ E W +I+ TGL I +T G Sbjct: 446 FPYLISGISSTINSAWGGLMIGEY--WPNIYGTHSLSVHTGLMKTIDIATANGDLTLAAW 503 Query: 558 GVLIMCCFV 566 G LI V Sbjct: 504 GSLIFGIIV 512 >gi|290559722|gb|EFD93047.1| binding-protein-dependent transport systems inner membrane component [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 379 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 12/266 (4%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM A+ +S++ A+S+ L + +P++D++Q++PIL F F V F+ PG Sbjct: 18 RMFIALFVSIIIGLFTGIAIARSKILNKIFMPVIDVLQTLPILAFFPFAVYLFVFDIPGS 77 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG A IF I TS +WN+ F YQ++ +P++ ++S+ + L+ +Q+ + +P ++P Sbjct: 78 -IGINAAVIFLIITSMLWNIIFGAYQAIVALPQEYIDLSKIYDLNLYQRLKKIFIPAALP 136 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDLLAILYAMLTML 249 + M +S + G F++V SE+ VG + GIG A ++ +Y+++ + Sbjct: 137 RISEQMSLSWAIGLFYLVTSEIFSVGTKDYAVKHGIGVEFVHAAATGNVTLYIYSIVIFV 196 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFR---KTNFLRFIGYSSWNFF 306 + L F +N+F L+ Y +F+ NF+ G + Sbjct: 197 LFVIATRLLFFENFEKMANRFYLKS----YKKRKLERVIFKSNLNKNFITLTGRIKNTLY 252 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFL 332 N VKK + + F F ++ Sbjct: 253 ---KNRVKKTIKHVSYAIFAFVSAYI 275 >gi|218884510|ref|YP_002428892.1| binding-protein-dependent transport systems inner membrane component [Desulfurococcus kamchatkensis 1221n] gi|218766126|gb|ACL11525.1| binding-protein-dependent transport systems inner membrane component [Desulfurococcus kamchatkensis 1221n] Length = 497 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 105/195 (53%), Gaps = 1/195 (0%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM +A ++SLL A++R + VL+PILD++QSIPILGF + F+ Sbjct: 15 RMFAAYLLSLLIALFTGIAMARNRVVEAVLLPILDVLQSIPILGFFPVVLSAFVYGLGPG 74 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + EL+AI I TS VWNM F +Y S+ ++ + ++ +R+ K + VP S Sbjct: 75 LG-GELSAIVLISTSLVWNMIFGVYASIKSLDPSFDLMASVYRIPLPLKLALVYVPASRT 133 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 L+ N ++S + GWFF+ ++E+I +G + L G+GS+I A D A M + Sbjct: 134 SLLSNSLISWASGWFFLTSAEVISMGTQTLKLVGLGSFIFDASNRGDAQAFAAGMGVLFT 193 Query: 251 VIFLYDQLLFRPMIV 265 VI +L+ P +V Sbjct: 194 VILATYIILWNPAVV 208 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 8/160 (5%) Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYILFNV-IAGASAFPND 478 +LL++ PA +++PL++ H P W + ++ G WY+ FNV I G D Sbjct: 333 GELLSSIPAMIWWPLLLPVA---HAAP--WFVMFFVYLQGALWYVYFNVMIFGLQYVKRD 387 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 E+ + I G+ +++ + +P + P +TG ++A GGAWNASI +E ++G + G Sbjct: 388 IIELTDVYKIRGFLYFKSVFIPAMLPSILTGLLSASGGAWNASIAAEYIAFGDFEVDIGG 447 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +G+ I + +G V+ L M ++ LN+ +W L+ Sbjct: 448 VGSLIDKLAAQGDSLGVLFVALYMSLVIVLLNKLIWGRLF 487 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 8/174 (4%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 A L+ + R +G+ +++ SIP ++++ L P F Sbjct: 316 AYLSHRRRAVGLAACTAGELLSSIP-------AMIWWPLLLPVAHAAPWFVMFFVYLQGA 368 Query: 147 VWNMTFS-MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + F+ M L + RD+ E++ +++ G+ F + +P +P ++ ++ + G W Sbjct: 369 LWYVYFNVMIFGLQYVKRDIIELTDVYKIRGFLYFKSVFIPAMLPSILTGLLSASGGAWN 428 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +A+E I GD + + G+GS I + D L +L+ L M VI L ++L+ Sbjct: 429 ASIAAEYIAFGDFEVDIGGVGSLIDKLAAQGDSLGVLFVALYMSLVIVLLNKLI 482 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 87/195 (44%), Gaps = 3/195 (1%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++++R+ +++ +I + GI + + + + P +L + P FFP+V+S Y Sbjct: 11 LSLYRMFAAYLLSLLIALFTGIAMARNRVVEAVLLPILDVLQSIPILGFFPVVLSAFVYG 70 Query: 445 HLNPNLWL-SLLMIFGTQ--WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 S +++ T W ++F V A + F +AS + I + +P Sbjct: 71 LGPGLGGELSAIVLISTSLVWNMIFGVYASIKSLDPSFDLMASVYRIPLPLKLALVYVPA 130 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 ++ ++ + W +EV S G L+ GLG++I +++ +G G+ + Sbjct: 131 SRTSLLSNSLISWASGWFFLTSAEVISMGTQTLKLVGLGSFIFDASNRGDAQAFAAGMGV 190 Query: 562 MCCFVLALNRFLWHP 576 + +LA LW+P Sbjct: 191 LFTVILATYIILWNP 205 >gi|325519245|gb|EGC98697.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 158 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 7/164 (4%) Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294 +++L A+ + ++ M VI YDQLLFRP+I W++KFR+E T SW+L L R+T Sbjct: 2 DKNLGAVGWVIVAMTVVILAYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRL 61 Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 + + + FF+ + +L + G +RF P+ ++ S +DI W +V Sbjct: 62 IHQLLVPAGWFFAKAARIPLRLPLS-GAMRFTLPK------VEKKASRTVDIVWATLVLI 114 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398 I W+ ++ T +V +V+ LG IT+ RVVVLI IAS Sbjct: 115 GTAYIVWRVFSFVSTGVTMAEVGHVLVLGLITLLRVVVLIAIAS 158 >gi|320101553|ref|YP_004177145.1| binding-protein-dependent transport systems inner membrane component [Desulfurococcus mucosus DSM 2162] gi|319753905|gb|ADV65663.1| binding-protein-dependent transport systems inner membrane component [Desulfurococcus mucosus DSM 2162] Length = 497 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 3/195 (1%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY-FMNLYPG 129 RM++A +S L A+ R + VL+P+LDI+QSIP+LGF F VV+ + + P Sbjct: 17 RMIAAYTVSTLLAISIGVAMARRRLVEEVLLPLLDILQSIPVLGF--FPVVFTLLLMLPA 74 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + + E AA+F + T +WNM F +Y ++ ++ D+ ++ + L + + Y+ VP + Sbjct: 75 RQVALEAAAVFLLTTGLLWNMIFGVYSAVKSLDPDILLMADVYGLKAFSRLAYIYVPSAR 134 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 L N ++S +GGWFF+ + E+I G L G+GS I E D A+L + Sbjct: 135 AALAANSIISWAGGWFFLTSVEVIASGPQEYRLLGLGSLIMYLYNEGDTWGFYTAILLLF 194 Query: 250 GVIFLYDQLLFRPMI 264 +I L+F P + Sbjct: 195 LMIVSSYLLVFNPAV 209 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 89/160 (55%), Gaps = 8/160 (5%) Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYILFNVIA-GASAFPND 478 ++L + PA +++PL+ S P WL L++F G+ WY FN++ G + Sbjct: 332 GEVLGSIPAIIWWPLLSPLAS-----PLPWLVSLVVFLQGSFWYEFFNIMLFGVPEVREE 386 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 E+A + + G+ ++RYI+LP + P +GA++A GGAWN++IV+E S G + + G Sbjct: 387 LMELARVYGVKGFNYFRYILLPSLLPSIASGALSAWGGAWNSTIVAEYFSSGILTVDLGG 446 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +G+ +A G+ L +L+ ++ L++ LW ++ Sbjct: 447 VGSTLARYVYSGNLEAASLTILLWAVMIVVLDKILWSRIF 486 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 + +L E++R + + G+ F Y+ +P +P + + + G W + +E G Sbjct: 382 EVREELMELARVYGVKGFNYFRYILLPSLLPSIASGALSAWGGAWNSTIVAEYFSSGILT 441 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL-ERTTGI 278 + L G+GS +A + +L A +L +I + D++L WS F+L E+T + Sbjct: 442 VDLGGVGSTLARYVYSGNLEAASLTILLWAVMIVVLDKIL------WSRIFKLVEKTHAV 495 >gi|13541218|ref|NP_110906.1| ABC-type nitrate transport permease [Thermoplasma volcanium GSS1] gi|14324606|dbj|BAB59533.1| ABC transport system ATP-binding protein PA [Thermoplasma volcanium GSS1] Length = 541 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 92/160 (57%), Gaps = 1/160 (0%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L ++IS++ + A LA K + + + ++++ +S+P++ F ++ F+ Sbjct: 14 TAGRVLGLILISIVTGWFLAYLAIKGKFFENIYIALIEVFESVPVISFFPIVLIIFVTRI 73 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +G ELAA F +FT+ VWN+ YQ+ +P+++ EV+ ++R+S + + +PF Sbjct: 74 GGP-LGVELAADFLVFTAVVWNIWMGEYQAFKTVPKEMIEVADNYRMSFLSRMARIYIPF 132 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 S P + N+ S+S G+F++ SE+ VG GIGS Sbjct: 133 SYPRIAANLFPSVSDGFFYITVSEVFTVGIHTYATFGIGS 172 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 13/174 (7%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV-VSCVSYYH-- 445 RV +++++ II I +G + P Q+L+A+P ++FP V + ++ H Sbjct: 327 RVATILVVSFIISIFLGYSLAIHTRAEGIGVPLLQVLSAYPPPIYFPFVFAASYTWIHNL 386 Query: 446 ---LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + ++ L T +Y+ ++ G A P+++ EV + ++ ++ R IILPG Sbjct: 387 MGPVTNEFFVIGLGFISTFYYMFYSFWMGVKALPSEYFEVMKNLNLGFFKKMRMIILPGT 446 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT-----GLGAYIAESTEKGS 551 FPY ++G + AW ++ E W I T G+ +I TE G+ Sbjct: 447 FPYLISGISSTINSAWGGLMIGEY--WPDIVGDKTLQIHYGIMKFIDIQTEAGN 498 >gi|327311383|ref|YP_004338280.1| binding-protein-dependent transport systems inner membrane component [Thermoproteus uzoniensis 768-20] gi|326947862|gb|AEA12968.1| binding-protein-dependent transport systems inner membrane component [Thermoproteus uzoniensis 768-20] Length = 543 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 100/170 (58%), Gaps = 1/170 (0%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L+ + S++ ++ +A KS+ V ++ + +S+P+ F +V+F++ Sbjct: 14 STARVLALIGASIVTGWLLGYIAIKSKVFENVYTSLIGVFESVPVFSFFPVVLVFFVSGI 73 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +GAELAA F +FT+ VWN+ +YQ+ +PR++ EV+ + RL + +L +P+ Sbjct: 74 -GGYLGAELAADFLVFTAVVWNIWIGIYQAFKTVPREMVEVAENVRLGFLSRMRHLYIPY 132 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 SMP + N+M S S G+F++ SE+ VG + + GIGS IA E + Sbjct: 133 SMPRIAANLMPSFSDGFFYITVSEVFSVGSSQYSVFGIGSVIAELTAEGN 182 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 17/176 (9%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC-------- 440 RV + +++ + + +G ++ + + P Q+ AA+PA V+FPL+ + Sbjct: 329 RVFAITLLSMALAVTLGYYLATHHEVERVVVPAIQVFAAYPAPVYFPLIFAATYPVIYGV 388 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + YY L+ LL T +Y+ ++ G A P++ E+ + +++ W R I+LP Sbjct: 389 LGYY--GNELYAILLGFISTFYYVFYSFWMGLKAMPHEIWELMDNLNLSYWGRLRLILLP 446 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASW-----GHIHLRTTGLGAYIAESTEKGS 551 PY V G + AW + E W GH GL I ST +G+ Sbjct: 447 AAMPYLVAGISSTIDSAWGGLAIGEY--WPGIYDGHDLAVGNGLMKLIVISTAEGN 500 >gi|91205579|ref|YP_537934.1| ABC-type anion transport system permease component [Rickettsia bellii RML369-C] gi|91069123|gb|ABE04845.1| ABC-type anion transport system permease component [Rickettsia bellii RML369-C] Length = 144 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 71/110 (64%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+ E + I LD L +Y +TTLRM A++ISL+ +Y T+AAK + Sbjct: 34 GLHEMDSSIGAIAKNEIYLDPIHLLKYTLQTTLRMFIAIIISLITAIIYGTIAAKYKTAE 93 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 +L+PILDI QS+PILGFLTFTV +F++++P +G E A IFA FT+QV Sbjct: 94 NILIPILDIFQSVPILGFLTFTVTWFVSIFPNSSLGIECAVIFATFTNQV 143 >gi|220910273|ref|YP_002485584.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866884|gb|ACL47223.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 280 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 35/258 (13%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 +L ++G+I+ P+ L +N+R L ++ F G +G+ WQ++ Sbjct: 44 QLLSSVGIIKLPGPD---ALITNERTRTYL-LYPFFNRGGTDVGLFWQAMA--------- 90 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ I A+++ I VGI IG P ++ + P Q L P + Sbjct: 91 -----------SLQRVMIGYIAAAVVGISVGILIGVNPFLNKALDPIFQFLRTVPPLAWV 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL S ++ P +L +IF T W IL N G P D+ V ++ ++ Sbjct: 140 PL--SLAAFQQNQP---AALFVIFITAIWPILINTAVGVKQIPQDYINVRQVLQLSNSKF 194 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I++P PY TG A G AW A I +E+ G + G+G +I +S + Sbjct: 195 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYIS 249 Query: 554 EVVLGVLIMCCFVLALNR 571 +++L ++ + L L+R Sbjct: 250 DIILALVYIGAIGLILDR 267 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/164 (20%), Positives = 82/164 (50%), Gaps = 13/164 (7%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L L PI ++++P L ++ ++ F P AA+F IF + +W + + Sbjct: 119 LNKALDPIFQFLRTVPPLAWVPLSLAAFQQNQP--------AALFVIFITAIWPILINTA 170 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + IP+D V + +LS + F+ + +P ++P + + +++ W ++A+E+++ Sbjct: 171 VGVKQIPQDYINVRQVLQLSNSKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMS 230 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G + GIG +I + + + I+ A++ + + + D+++ Sbjct: 231 G-----IVGIGFFIWDSYQNNYISDIILALVYIGAIGLILDRVV 269 >gi|218248270|ref|YP_002373641.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 8801] gi|33591065|gb|AAQ23047.1| CmpB [Cyanothece sp. PCC 8801] gi|218168748|gb|ACK67485.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8801] Length = 280 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 35/260 (13%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 +LC +G+I+ P + L N+R L ++ F G +G+ WQSI Sbjct: 44 QLCSMIGLIKLPPPSD---LWFNERTRIYL-MYPFFNRGGTDVGLFWQSIA--------- 90 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ +A+I+ I GI++G + + P Q L P + Sbjct: 91 -----------SLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWV 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ ++ L N +L +IF T W IL N G P D+ V ++ ++ Sbjct: 140 PIALAA-----LQQNQPAALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKF 194 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I++P PY TG A G AW A I +E+ G + G+G +I +S + Sbjct: 195 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYIS 249 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++L ++ + L L+RF+ Sbjct: 250 DIILALVYIGAIGLMLDRFM 269 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 32/160 (20%), Positives = 78/160 (48%), Gaps = 13/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ ++++P L ++ + P AA+F IF + VW + + + Sbjct: 123 LDPLFQFLRTVPPLAWVPIALAALQQNQP--------AALFVIFITAVWPILINTAVGVQ 174 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP+D V + +LS + F+ + +P ++P + + +++ W ++A+E+++ G Sbjct: 175 QIPQDYINVRKVLQLSQKKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG--- 231 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + GIG +I + + + I+ A++ + + + D+ + Sbjct: 232 --IVGIGFFIWDSYQNNYISDIILALVYIGAIGLMLDRFM 269 >gi|257060406|ref|YP_003138294.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 8802] gi|256590572|gb|ACV01459.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8802] Length = 280 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 35/260 (13%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 +LC +G+I+ P + L N+R L ++ F G +G+ WQS+ Sbjct: 44 QLCSMIGLIKLPPPSD---LWFNERTRIYL-MYPFFNRGGTDVGLFWQSVA--------- 90 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ +A+I+ I GI++G + + P Q L P + Sbjct: 91 -----------SLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWV 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ ++ L N +L +IF T W IL N G P D+ V ++ ++ Sbjct: 140 PIALAA-----LQQNQPAALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKF 194 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I++P PY TG A G AW A I +E+ G + G+G +I +S + Sbjct: 195 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYIS 249 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++L ++ + L L+RF+ Sbjct: 250 DIILALVYIGAIGLMLDRFM 269 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 32/160 (20%), Positives = 78/160 (48%), Gaps = 13/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ ++++P L ++ + P AA+F IF + VW + + + Sbjct: 123 LDPLFQFLRTVPPLAWVPIALAALQQNQP--------AALFVIFITAVWPILINTAVGVQ 174 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP+D V + +LS + F+ + +P ++P + + +++ W ++A+E+++ G Sbjct: 175 QIPQDYINVRKVLQLSQKKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG--- 231 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + GIG +I + + + I+ A++ + + + D+ + Sbjct: 232 --IVGIGFFIWDSYQNNYISDIILALVYIGAIGLMLDRFM 269 >gi|166364741|ref|YP_001657014.1| bicarbonate transport system permease protein [Microcystis aeruginosa NIES-843] gi|166087114|dbj|BAG01822.1| bicarbonate transport system permease protein [Microcystis aeruginosa NIES-843] Length = 276 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 40/287 (13%) Query: 293 NFLRFIGYSSWNFFSPLSNNVK-----KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347 NF +F S + P+ + +L LG+I+ P + L +N+R L ++ Sbjct: 14 NFGKFWKKHSQDILPPIIGTLGFLIVWQLVSMLGLIKLPPPSD---LITNERTRTYL-MY 69 Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 F G+ G+ WQ++ ++ RV++ A+++ I VGI Sbjct: 70 PFFDRGGIDKGLFWQTLA--------------------SLQRVLIGYSFAAVVGIGVGIM 109 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILF 466 +G ++ + P Q L P + PL ++ L N +L +IF T W IL Sbjct: 110 VGLNSFLNKALDPLFQFLRTVPPLAWVPLSLAA-----LQQNQPAALFVIFITAVWPILI 164 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N G P D+ V ++ +++ I++P PY TG A G AW A I +E+ Sbjct: 165 NTTVGVQQIPQDYINVKQVLQLSSKKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEI 224 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G + G+G +I ++ + +++L + + L L+RF+ Sbjct: 225 VMSGIV-----GIGFFIWDAYQNNYISDIILALFYIGGVGLLLDRFM 266 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/260 (21%), Positives = 117/260 (45%), Gaps = 28/260 (10%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVD--------IVPITLDVHSLPQ 63 S+ I P I L F++V ++++L G+ + P D++ + P D + + Sbjct: 23 SQDILPPIIGTLGFLIVWQLVSML--GLIKLPPPSDLITNERTRTYLMYPF-FDRGGIDK 79 Query: 64 YASRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 TL L ++I F V + + L L P+ ++++P L ++ + Sbjct: 80 GLFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWVPLS 139 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + P AA+F IF + VW + + + IP+D V + +LS + Sbjct: 140 LAALQQNQP--------AALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSSKKF 191 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F+ + +P ++P + + +++ W ++A+E+++ G + GIG +I A + + Sbjct: 192 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNYIS 246 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + GV L D+ + Sbjct: 247 DIILALFYIGGVGLLLDRFM 266 >gi|282896008|ref|ZP_06304039.1| Nitrate transport permease [Raphidiopsis brookii D9] gi|281199118|gb|EFA73988.1| Nitrate transport permease [Raphidiopsis brookii D9] Length = 279 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ I +GI IG +S + P QLL P PL Sbjct: 84 WQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALDPLFQLLRTVP-----PLAWVP 138 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 +S L N +L +IF T W IL N G P D+ VA ++ ++ +++ Sbjct: 139 ISLAALRQNEPAALFVIFITSLWPILINTAVGVKEIPVDYNNVAKVLQLSQKEYFFNVLI 198 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG + G AW A I +E+ G + G+G +I +S + EV+L + Sbjct: 199 PAALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQANKVSEVILAL 253 Query: 560 LIMCCFVLALNRFL 573 + + L L++F+ Sbjct: 254 VYIGVVGLLLDKFM 267 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 33/164 (20%), Positives = 81/164 (49%), Gaps = 13/164 (7%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 + L P+ +++++P L ++ ++ P AA+F IF + +W + + Sbjct: 117 MSKALDPLFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITSLWPILINTA 168 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + IP D V++ +LS + F+ + +P ++P + + +S+ W ++A+E+++ Sbjct: 169 VGVKEIPVDYNNVAKVLQLSQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMS 228 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G + GIG +I + + + ++ A++ + V L D+ + Sbjct: 229 G-----IVGIGFFIWDSYQANKVSEVILALVYIGVVGLLLDKFM 267 >gi|75907249|ref|YP_321545.1| nitrate transport permease [Anabaena variabilis ATCC 29413] gi|75700974|gb|ABA20650.1| Nitrate transport permease [Anabaena variabilis ATCC 29413] Length = 279 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 11/194 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ + +G+ IG +S + P QLL P PL Sbjct: 83 WQILASLQRVAISYSLAAVVGVALGVLIGINKTMSKALDPIFQLLRTVP-----PLAWVP 137 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 +S L N +L +IF T W IL N G + P D+ VA ++ ++ I++ Sbjct: 138 ISLAALRQNEPAALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNILI 197 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG A G AW A I +E+ G + G+G +I ++ + + EV+L + Sbjct: 198 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNNVSEVILAL 252 Query: 560 LIMCCFVLALNRFL 573 + + L L++ + Sbjct: 253 VYIGVVGLILDKLM 266 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/167 (20%), Positives = 85/167 (50%), Gaps = 13/167 (7%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 ++ + L PI +++++P L ++ ++ P AA+F IF + +W + Sbjct: 113 NKTMSKALDPIFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITAIWPILI 164 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + IP+D V++ +LS + F + +P ++P + + +++ W ++A+E+ Sbjct: 165 NTAVGVTQIPQDYNNVAKVLQLSRKEYFTNILIPSALPYIFTGLRIAIGLAWLAIIAAEI 224 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 ++ G + GIG +I A + ++ ++ A++ + V + D+L+ Sbjct: 225 VMSG-----IVGIGFFIWDAYQNNNVSEVILALVYIGVVGLILDKLM 266 >gi|307151630|ref|YP_003887014.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306981858|gb|ADN13739.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 279 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 35/258 (13%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 + T+G+I+ P + L +++R +L ++ F G+ G+ WQ++ Sbjct: 43 QFISTIGLIKLPPPSS---LWTDERTRILL-LYPFYDRGGLDKGLFWQTLA--------- 89 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV +A+II I VGI +G +P I+ + P Q L + Sbjct: 90 -----------SLGRVAQGYSLAAIIGISVGILVGTQPLINKALDPIFQFL-----RMVA 133 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL ++ L N ++ +IF T W IL N G P D+ V ++ ++ Sbjct: 134 PLAWVPIALVALQQNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVQQVLQLSNQKF 193 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I+LP PY TG A G AW A I +E+ G + G+G +I ++ ++ Sbjct: 194 FFKILLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYIS 248 Query: 554 EVVLGVLIMCCFVLALNR 571 E++L V+ + L L+R Sbjct: 249 EIILAVIYIGAVGLILDR 266 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 66/121 (54%), Gaps = 5/121 (4%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIF IF + VW + + + + IP+D V + +LS + F+ + +P ++P + + Sbjct: 151 AAIFVIFITSVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKILLPSALPYIFTGL 210 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +++ W ++A+E+++ G + GIG +I A ++ + I+ A++ + V + D Sbjct: 211 RIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAVIYIGAVGLILD 265 Query: 257 Q 257 + Sbjct: 266 R 266 >gi|218441576|ref|YP_002379905.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218174304|gb|ACK73037.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 279 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 35/258 (13%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 +L ++G+I+ P + L +++R +L ++ F G+ G+ WQ++ Sbjct: 43 QLISSVGIIKLPPPSS---LWTDERTRILL-LYPFYDRGGLDKGLFWQTLA--------- 89 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV +A+II I VGI +G +P I+ + P Q L + Sbjct: 90 -----------SLGRVAQGYSLAAIIGIGVGILVGTQPLINKALDPIFQFL-----RMVA 133 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL ++ L N ++ +IF T W IL N G P D+ V ++ ++ Sbjct: 134 PLAWVPIALVALQQNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNQKF 193 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I+LP PY TG A G AW A I +E+ G + G+G +I ++ ++ Sbjct: 194 FFKILLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYIS 248 Query: 554 EVVLGVLIMCCFVLALNR 571 E++L V+ + L L+R Sbjct: 249 EIILAVIYIGAVGLILDR 266 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 66/121 (54%), Gaps = 5/121 (4%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIF IF + VW + + + + IP+D V + +LS + F+ + +P ++P + + Sbjct: 151 AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKILLPSALPYIFTGL 210 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +++ W ++A+E+++ G + GIG +I A ++ + I+ A++ + V + D Sbjct: 211 RIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAVIYIGAVGLILD 265 Query: 257 Q 257 + Sbjct: 266 R 266 >gi|218249102|ref|YP_002374473.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 8801] gi|257062188|ref|YP_003140076.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 8802] gi|218169580|gb|ACK68317.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8801] gi|256592354|gb|ACV03241.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8802] Length = 277 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+I+ I +GI IG I + P Q+L P + P ++ Sbjct: 81 WQITASLQRVAIGYSLAAIVGIALGILIGSNSFIYDAVDPIFQVLRTVPPLAWLP--IAL 138 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + NP+ ++ +IF T W I+ N G P D+K VA ++G++++ I+ Sbjct: 139 AGFEEANPS---AIFVIFITAIWPIILNTTVGVQQIPKDYKNVAKVLRLSGFKYFWEIMF 195 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I +S PE+++ + Sbjct: 196 PAAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDSYNSSQLPEIIVAL 249 Query: 560 LIMCCFVLALNRFL 573 + + L L+R + Sbjct: 250 IYVGLVGLILDRLV 263 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI +++++P L +L + F P +AIF IF + +W + + + I Sbjct: 120 PIFQVLRTVPPLAWLPIALAGFEEANP--------SAIFVIFITAIWPIILNTTVGVQQI 171 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D + V++ RLSG++ FW + P ++P + + + + W +VA+EM+V G Sbjct: 172 PKDYKNVAKVLRLSGFKYFWEIMFPAAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV---- 227 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I + L I+ A++ + V + D+L+ Sbjct: 228 --GIGFFIWDSYNSSQLPEIIVALIYVGLVGLILDRLV 263 >gi|186682670|ref|YP_001865866.1| nitrate ABC transporter inner membrane subunit [Nostoc punctiforme PCC 73102] gi|186465122|gb|ACC80923.1| nitrate ABC transporter, inner membrane subunit [Nostoc punctiforme PCC 73102] Length = 279 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 11/192 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+I+ I +G+ IG +S + P QLL P PL Sbjct: 83 WQILASLQRVAISYTLAAIVGIGLGVLIGVNKTMSKALDPIFQLLRTVP-----PLAWVP 137 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 +S L N +L +IF T W IL N G + P D+ VA ++ ++ I++ Sbjct: 138 ISLAALRQNEPAALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNILI 197 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG A G AW A I +E+ G + G+G +I ++ + + EV+L + Sbjct: 198 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNNVSEVILAL 252 Query: 560 LIMCCFVLALNR 571 + + L L++ Sbjct: 253 VYIGVVGLLLDK 264 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/167 (20%), Positives = 84/167 (50%), Gaps = 13/167 (7%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 ++ + L PI +++++P L ++ ++ P AA+F IF + +W + Sbjct: 113 NKTMSKALDPIFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITAIWPILI 164 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + IP+D V++ +LS + F + +P ++P + + +++ W ++A+E+ Sbjct: 165 NTAVGVTQIPQDYNNVAKVLQLSRKEYFTNILIPSALPYIFTGLRIAIGLAWLAIIAAEI 224 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 ++ G + GIG +I A + ++ ++ A++ + V L D+ + Sbjct: 225 VMSG-----IVGIGFFIWDAYQNNNVSEVILALVYIGVVGLLLDKAM 266 >gi|56752484|ref|YP_173185.1| permease [Synechococcus elongatus PCC 6301] gi|81300298|ref|YP_400506.1| nitrate transport permease [Synechococcus elongatus PCC 7942] gi|75504666|sp|Q55106|CMPB_SYNE7 RecName: Full=Bicarbonate transport system permease protein CmpB gi|81676789|sp|Q5MZ55|CMPB_SYNP6 RecName: Full=Bicarbonate transport system permease protein CmpB gi|1019379|dbj|BAA05387.1| CmpB [Synechococcus elongatus PCC 7942] gi|56687443|dbj|BAD80665.1| permease protein [Synechococcus elongatus PCC 6301] gi|81169179|gb|ABB57519.1| nitrate transport permease [Synechococcus elongatus PCC 7942] Length = 278 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 G R P L L + +R +L ++ F G+ G+ WQ+I Sbjct: 48 GATRLPGP---LSLFTEERTRELL-LYPFLDRGGLDKGLFWQTIA--------------- 88 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ RV IA+II I VGI +G +++ + P Q L + P ++ Sbjct: 89 -----SLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVP--IAL 141 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 V++ P ++ +IF T W IL N G P D+ VA ++ ++ ++L Sbjct: 142 VAFQQNQPA---AIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVL 198 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG A G +W A I +E+ G + G+G +I ++ ++ +++L V Sbjct: 199 PAALPYIFTGLRIAIGLSWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYVSDIILAV 253 Query: 560 LIMCCFVLALNRFL 573 + + L L+RF+ Sbjct: 254 IYIGAVGLLLDRFV 267 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 13/187 (6%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ I+ + L +R+L +L P+ ++ I L ++ +V F P Sbjct: 92 RVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALVAFQQNQP-- 149 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AAIF IF + VW + + + + IP+D V+R R+S + + +P ++P Sbjct: 150 ------AAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAALP 203 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 + + +++ W ++A+E+++ G + GIG +I A ++ + I+ A++ + Sbjct: 204 YIFTGLRIAIGLSWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYVSDIILAVIYIGA 258 Query: 251 VIFLYDQ 257 V L D+ Sbjct: 259 VGLLLDR 265 >gi|282898853|ref|ZP_06306840.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] gi|281196380|gb|EFA71290.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] Length = 279 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 11/194 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ I +GI IG +S + P QLL P PL Sbjct: 84 WQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALDPLFQLLRTVP-----PLAWVP 138 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 +S L N +L +IF T W IL N G P D+ VA ++ ++ +++ Sbjct: 139 ISLAALRQNEPAALFVIFITSLWPILINTAVGVKEIPVDYNNVAKVLQLSQKEYFFNVLI 198 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG + G AW A I +E+ G + G+G +I ++ + EV+L + Sbjct: 199 PAALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQANKVSEVILAL 253 Query: 560 LIMCCFVLALNRFL 573 + + L L++F+ Sbjct: 254 VYIGVVGLLLDKFM 267 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/164 (20%), Positives = 81/164 (49%), Gaps = 13/164 (7%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 + L P+ +++++P L ++ ++ P AA+F IF + +W + + Sbjct: 117 MSKALDPLFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITSLWPILINTA 168 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + IP D V++ +LS + F+ + +P ++P + + +S+ W ++A+E+++ Sbjct: 169 VGVKEIPVDYNNVAKVLQLSQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMS 228 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G + GIG +I A + + ++ A++ + V L D+ + Sbjct: 229 G-----IVGIGFFIWDAYQANKVSEVILALVYIGVVGLLLDKFM 267 >gi|159030590|emb|CAO88253.1| cmpB [Microcystis aeruginosa PCC 7806] Length = 276 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 35/260 (13%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 +L +G+I+ P + + +N+R L ++ F G+ G+ WQ++ Sbjct: 41 QLMSMVGLIKLPPPSD---IITNERTRTYL-MYPFFDRGGIDKGLFWQTLA--------- 87 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ A+++ I VGI +G ++ + P Q L P + Sbjct: 88 -----------SLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWV 136 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL ++ L N +L +IF T W IL N G P D+ V ++ ++ Sbjct: 137 PLSLAA-----LQQNQPAALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSNQKF 191 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I++P PY TG A G AW A I +E+ G + G+G +I ++ + Sbjct: 192 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYIS 246 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++L + + L L+RF+ Sbjct: 247 DIILALFYIGGVGLLLDRFM 266 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 80/164 (48%), Gaps = 13/164 (7%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L L P+ ++++P L ++ ++ P AA+F IF + VW + + Sbjct: 116 LNKALDPLFQFLRTVPPLAWVPLSLAALQQNQP--------AALFVIFITAVWPILINTT 167 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + IP+D V + +LS + F+ + +P ++P + + +++ W ++A+E+++ Sbjct: 168 VGVQQIPQDYINVKQVLQLSNQKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMS 227 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G + GIG +I A + + I+ A+ + GV L D+ + Sbjct: 228 G-----IVGIGFFIWDAYQNNYISDIILALFYIGGVGLLLDRFM 266 >gi|126660803|ref|ZP_01731898.1| hypothetical protein CY0110_12367 [Cyanothece sp. CCY0110] gi|126617900|gb|EAZ88674.1| hypothetical protein CY0110_12367 [Cyanothece sp. CCY0110] Length = 280 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A+I+ I VGI +G +P I+ + P Q L + PL Sbjct: 86 WQTLASLGRVAQGYSLAAIVGISVGILVGTQPLINKALDPLFQFL-----RMVAPLAWVP 140 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ L N ++ +IF T W IL N G P D+ V ++ +++ I+L Sbjct: 141 IALVALQQNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNRKFFFKILL 200 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG A G AW A I +E+ G + G+G +I ++ ++ E++L V Sbjct: 201 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILAV 255 Query: 560 LIMCCFVLALNR 571 + + L L+R Sbjct: 256 VYIGAVGLLLDR 267 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 66/121 (54%), Gaps = 5/121 (4%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIF IF + VW + + + + IP+D V + +LS + F+ + +P ++P + + Sbjct: 152 AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNRKFFFKILLPSALPYIFTGL 211 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +++ W ++A+E+++ G + GIG +I A ++ + I+ A++ + V L D Sbjct: 212 RIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAVVYIGAVGLLLD 266 Query: 257 Q 257 + Sbjct: 267 R 267 >gi|17230370|ref|NP_486918.1| bicarbonate transport permease protein [Nostoc sp. PCC 7120] gi|17131972|dbj|BAB74577.1| bicarbonate transport permease protein [Nostoc sp. PCC 7120] Length = 279 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 11/189 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + A+++ I +GI IG +S + P QLL P PL +S Sbjct: 88 SLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVP-----PLAWVPISLAA 142 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L N +L +IF T W IL N G P D+ VA ++ ++ I++P P Sbjct: 143 LRQNEPAALFVIFITAIWPILINTAVGVKEIPQDYNNVAKVLQLSKKEYFLNILIPAALP 202 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG A G AW A I +E+ G + G+G +I ++ + E++L ++ + Sbjct: 203 YIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYISEIILALVYIGA 257 Query: 565 FVLALNRFL 573 L L++ + Sbjct: 258 VGLLLDKLM 266 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/167 (20%), Positives = 84/167 (50%), Gaps = 13/167 (7%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 ++ + L P+ +++++P L ++ ++ P AA+F IF + +W + Sbjct: 113 NKTMSKALDPLFQLLRTVPPLAWVPISLAALRQNEP--------AALFVIFITAIWPILI 164 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + IP+D V++ +LS + F + +P ++P + + +++ W ++A+E+ Sbjct: 165 NTAVGVKEIPQDYNNVAKVLQLSKKEYFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEI 224 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 ++ G + GIG +I A + + I+ A++ + V L D+L+ Sbjct: 225 VMSG-----IVGIGFFIWDAYQNNYISEIILALVYIGAVGLLLDKLM 266 >gi|300866703|ref|ZP_07111387.1| bicarbonate transport permease protein [Oscillatoria sp. PCC 6506] gi|300335303|emb|CBN56547.1| bicarbonate transport permease protein [Oscillatoria sp. PCC 6506] Length = 281 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 13/207 (6%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +N TY L+ W ++ RV +A+++ I G+ +G P ++ + P Q L Sbjct: 74 MNSKTYGVGLF--WQTLASLERVAKGYTLAAVVGIGTGVLVGTNPFLNKALDPIFQFL-- 129 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSF 486 + PL ++ L N +L +IF T W IL N G P+D+ VA Sbjct: 130 ---RMVAPLAWVPIALAALQQNEPAALFVIFVTSVWPILINTAEGVRQIPDDYNNVAKVL 186 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 ++ ++ I+ P PY TG A G AW A I +E+ G TG+G +I + Sbjct: 187 QLSRKEYYLNILFPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----ITGIGFFIWNA 241 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ E++L V+ + L L+R + Sbjct: 242 YQQNYISEILLAVVYIGAVGLILDRLM 268 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 70/127 (55%), Gaps = 9/127 (7%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV--PFSMPGL 192 E AA+F IF + VW + + + + IP D V++ +LS +K +YL + P ++P + Sbjct: 149 EPAALFVIFVTSVWPILINTAEGVRQIPDDYNNVAKVLQLS--RKEYYLNILFPSALPYI 206 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + +++ W ++A+E+++ G T GIG +I A ++ + IL A++ + V Sbjct: 207 FTGLRIAIGLAWLAIIAAEIVMSGIT-----GIGFFIWNAYQQNYISEILLAVVYIGAVG 261 Query: 253 FLYDQLL 259 + D+L+ Sbjct: 262 LILDRLM 268 >gi|289549090|ref|YP_003474078.1| nitrate ABC transporter inner membrane protein [Thermocrinis albus DSM 14484] gi|289182707|gb|ADC89951.1| nitrate ABC transporter, inner membrane subunit [Thermocrinis albus DSM 14484] Length = 274 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 10/190 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +I S + +P+G+++G + + P Q L +FP+ ++ Sbjct: 83 WQLLYSLKRVFLGFLIGSSVAVPLGLFLGMWNKLQTMFNPIIQTLRPVSPLAWFPIGLAI 142 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 H +++ + W L N GAS+ P D++ VA F + W + RY++LP Sbjct: 143 FQASHQAAVFTIAITSL----WPTLINTAYGASSVPEDYRNVAKVFGFSRWTYLRYVVLP 198 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P+ +TG + G AW + +E+ + G TG+G YI +S +V+ +L Sbjct: 199 YTLPFILTGLKISMGIAWMVIVAAEMLAGG------TGIGFYIWDSWNALDLRKVISALL 252 Query: 561 IMCCFVLALN 570 I+ L L+ Sbjct: 253 IIGIVGLVLD 262 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + AA+F I + +W + ++P D V++ F S W Y+ +P+++P ++ Sbjct: 146 SHQAAVFTIAITSLWPTLINTAYGASSVPEDYRNVAKVFGFSRWTYLRYVVLPYTLPFIL 205 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + +SM W +VA+EM+ G GIG YI + DL ++ A+L ++G++ Sbjct: 206 TGLKISMGIAWMVIVAAEMLAGGT------GIGFYIWDSWNALDLRKVISALL-IIGIVG 258 Query: 254 L 254 L Sbjct: 259 L 259 >gi|172035220|ref|YP_001801721.1| bicarbontate transport system permease [Cyanothece sp. ATCC 51142] gi|171696674|gb|ACB49655.1| bicarbontate transport system permease protein [Cyanothece sp. ATCC 51142] Length = 280 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A++I I VGI +G +P I+ + P Q L + PL Sbjct: 86 WQTLASLGRVAQGYSLAALIGISVGILVGTQPLINKALDPLFQFL-----RMVAPLAWVP 140 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ L N ++ +IF T W IL N G P D+ V ++ +++ I+L Sbjct: 141 IALVALQQNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNKKFFFKILL 200 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG A G AW A I +E+ G + G+G +I ++ ++ E++L V Sbjct: 201 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILAV 255 Query: 560 LIMCCFVLALNR 571 + + L L+R Sbjct: 256 VYIGAVGLLLDR 267 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 66/121 (54%), Gaps = 5/121 (4%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIF IF + VW + + + + IP+D V + +LS + F+ + +P ++P + + Sbjct: 152 AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNKKFFFKILLPSALPYIFTGL 211 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +++ W ++A+E+++ G + GIG +I A ++ + I+ A++ + V L D Sbjct: 212 RIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAVVYIGAVGLLLD 266 Query: 257 Q 257 + Sbjct: 267 R 267 >gi|111074973|gb|ABH04834.1| ABC-type transporter permease component [Heliobacillus mobilis] Length = 248 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 12/177 (6%) Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 +I+A + IP+G+ +G++ + ++P LL P V+ P ++ + + L+ S Sbjct: 65 LILALLTAIPLGLLVGWQRRLHQAVEPLTNLLGPIPPIVYIPYTIALLPTFTLS-----S 119 Query: 454 LLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 + +IF G W + N +AG A + A + ++ W ++LPG P+ ++G Sbjct: 120 IFVIFIGAFWPLFINTVAGVQAVEKGLIDSARTLGVSRWTMLTRVLLPGALPHILSGGSI 179 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 + A+ +E+ T+GLG Y+ ++ +P VV G+L++ VL L Sbjct: 180 SLVLAFILLTAAEMIG------ATSGLGWYVKYFSDFADYPRVVAGILVIGIVVLLL 230 Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust. Identities = 28/142 (19%), Positives = 65/142 (45%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 + S ++++LL L RRL + P+ +++ IP + ++ +T+ Sbjct: 61 LTSGLILALLTAIPLGLLVGWQRRLHQAVEPLTNLLGPIPPIVYIPYTIALLPTF----- 115 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 L++IF IF W + + + + + L + +R+ +S W + +P ++P Sbjct: 116 ---TLSSIFVIFIGAFWPLFINTVAGVQAVEKGLIDSARTLGVSRWTMLTRVLLPGALPH 172 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ +S+ + + A+EMI Sbjct: 173 ILSGGSISLVLAFILLTAAEMI 194 >gi|75909859|ref|YP_324155.1| nitrate transport permease [Anabaena variabilis ATCC 29413] gi|75703584|gb|ABA23260.1| Nitrate transport permease [Anabaena variabilis ATCC 29413] Length = 273 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 10/193 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 WL ++ RVVV ++A++I IP+G I I P QLL + PL + Sbjct: 80 WLILASLKRVVVGYLLATLIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQAV 139 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L PN ++ W I+ N G P D++ V+ ++ + I+LP Sbjct: 140 ----FLKPNPSAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLESFYKILLP 195 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P+ TG A G +W A + +E+ L G+G +I ++ + E++L ++ Sbjct: 196 ATLPHIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILAIV 249 Query: 561 IMCCFVLALNRFL 573 + L L++ + Sbjct: 250 YLGAVGLVLDKIM 262 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 77/158 (48%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L F+ P +AIF I + +W + + + + Sbjct: 119 PLIQLLRPVAPLAWLPLAQAVFLKPNP--------SAIFVICITAIWPIILNTALGVKLV 170 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D VS+ LS + F+ + +P ++P + + +++ W VVA+EM++ D Sbjct: 171 PKDYRNVSKLLGLSPLESFYKILLPATLPHIFTGLRIAIGLSWLAVVAAEMLLSDD---- 226 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A ++ ++ A++ + V + D+++ Sbjct: 227 --GIGFFIVDAYNNANIHEMILAIVYLGAVGLVLDKIM 262 >gi|86607538|ref|YP_476300.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556080|gb|ABD01037.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp. JA-2-3B'a(2-13)] gi|158819610|gb|ABW80922.1| permease protein NrtB [uncultured bacterium] Length = 319 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 12/187 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A ++ + G+ IG + + P Q+L P + P +S ++ Sbjct: 130 SLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLP--ISLAAFRD 187 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP+ ++ +IF T W IL N + G P D++ VA ++GW+++ I+ P P Sbjct: 188 ANPS---AIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVP 244 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E++L ++ + Sbjct: 245 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILALIYVGM 298 Query: 565 FVLALNR 571 L L+R Sbjct: 299 VGLLLDR 305 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 14/188 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ ++ L V + +R L L PI +++++P L +L ++ F + P Sbjct: 133 RVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISLAAFRDANP-- 190 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +AIF IF + +W + + + IP+D V+R R+SGW+ F+ + P ++P Sbjct: 191 ------SAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVP 244 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 + + + + W +VA+EM++ G GIG +I A + I+ A++ + Sbjct: 245 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILALIYVGM 298 Query: 251 VIFLYDQL 258 V L D++ Sbjct: 299 VGLLLDRI 306 >gi|86605329|ref|YP_474092.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp. JA-3-3Ab] gi|86553871|gb|ABC98829.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp. JA-3-3Ab] Length = 319 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 12/187 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A ++ + G+ IG + + P Q+L P + P +S ++ Sbjct: 130 SLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLP--ISLAAFRD 187 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP+ ++ +IF T W IL N + G P D++ VA ++GW+++ I+ P P Sbjct: 188 ANPS---AIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVP 244 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E++L ++ + Sbjct: 245 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILALIYVGM 298 Query: 565 FVLALNR 571 L L+R Sbjct: 299 VGLLLDR 305 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 14/188 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ ++ L V + +R L L PI +++++P L +L ++ F + P Sbjct: 133 RVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISLAAFRDANP-- 190 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +AIF IF + +W + + + IP+D V+R R+SGW+ F+ + P ++P Sbjct: 191 ------SAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVP 244 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 + + + + W +VA+EM++ G GIG +I A + I+ A++ + Sbjct: 245 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILALIYVGM 298 Query: 251 VIFLYDQL 258 V L D++ Sbjct: 299 VGLLLDRI 306 >gi|37521137|ref|NP_924514.1| nitrate/nitrite transport system permease protein [Gloeobacter violaceus PCC 7421] gi|35212133|dbj|BAC89509.1| nitrate/nitrite transport system permease protein [Gloeobacter violaceus PCC 7421] Length = 281 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 12/203 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ + + W ++ RV + +A+++ + VGI +G + P Q+L P + Sbjct: 81 ENDVGIAWQLAASLQRVAIGYTLAAVVGVSVGILMGSMRSFQLALDPIFQVLRTIPPLAW 140 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492 P+ ++ +S NP+ ++ +IF T W I+ N G + P D++ VAS ++ Sbjct: 141 LPIALAALS--QANPS---AIFVIFITAVWPIIINTAVGVRSTPQDYRNVASVLKLSKPT 195 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++ I+LP Y TG A G AW A + +E+ + G G+G +I +S Sbjct: 196 YFFQILLPSAASYIFTGLRIAVGLAWLAIVAAEMLTGG------VGIGFFIWDSYNSSRM 249 Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575 +++L VL + L+R +++ Sbjct: 250 ADIILAVLCVGLVGFVLDRMIYY 272 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 14/167 (8%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R + L PI ++++IP L +L + P +AIF IF + VW + + Sbjct: 119 RSFQLALDPIFQVLRTIPPLAWLPIALAALSQANP--------SAIFVIFITAVWPIIIN 170 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + P+D V+ +LS F+ + +P + + + +++ W +VA+EM+ Sbjct: 171 TAVGVRSTPQDYRNVASVLKLSKPTYFFQILLPSAASYIFTGLRIAVGLAWLAIVAAEML 230 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 G GIG +I + + I+ A+L + V F+ D++++ Sbjct: 231 TGGV------GIGFFIWDSYNSSRMADIILAVLCVGLVGFVLDRMIY 271 >gi|87302043|ref|ZP_01084877.1| permease protein [Synechococcus sp. WH 5701] gi|87283611|gb|EAQ75566.1| permease protein [Synechococcus sp. WH 5701] Length = 265 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 35/258 (13%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 +L +L + R P L L +++R +L ++ F G+ G+ WQ++ Sbjct: 29 QLSASLNLTRLPGP---LSLWTDERTRELL-LYPFYDRGGLDKGLFWQTMA--------- 75 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV +A+++ I GI +G P ++ P Q L + Sbjct: 76 -----------SLGRVAQGYFLAALVGIAAGITVGLSPALNRAFDPLFQFL-----RMVA 119 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL ++ N ++ +IF T W IL N G P D++ VA ++ R+ Sbjct: 120 PLAWVPIALVIFQKNQPAAIFVIFITAVWPILINTAEGVRQIPQDYRNVALVLQMSKGRF 179 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + ++LP PY TG + G AW A I +E+ G + G+G +I ++ ++ Sbjct: 180 FTKVLLPSALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYVS 234 Query: 554 EVVLGVLIMCCFVLALNR 571 ++VL V+ + L L+R Sbjct: 235 DIVLAVIWIGAVGLLLDR 252 Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 13/156 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ ++ + L ++ +V F P AAIF IF + VW + + + + I Sbjct: 110 PLFQFLRMVAPLAWVPIALVIFQKNQP--------AAIFVIFITAVWPILINTAEGVRQI 161 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V+ ++S + F + +P ++P + + +S+ W ++A+E+++ G Sbjct: 162 PQDYRNVALVLQMSKGRFFTKVLLPSALPYIFTGLRISIGLAWLAIIAAEIVMSG----- 216 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + GIG +I A ++ + I+ A++ + V L D+ Sbjct: 217 IVGIGFFIWDAYQQNYVSDIVLAVIWIGAVGLLLDR 252 >gi|16332005|ref|NP_442733.1| hypothetical protein slr0041 [Synechocystis sp. PCC 6803] gi|81672180|sp|Q55461|CMPB_SYNY3 RecName: Full=Bicarbonate transport system permease protein CmpB gi|1001317|dbj|BAA10804.1| unknown protein [Synechocystis sp. PCC 6803] Length = 280 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 11/192 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A+I+ I GI +G +P + + P Q L + PL Sbjct: 86 WQTLASLGRVAQGYSLAAIVGISTGILVGTQPLLDKALDPIFQFL-----RMVAPLAWVP 140 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ L N ++ +IF T W IL N G P D+ V ++ +++ I++ Sbjct: 141 IALVALQQNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVRKVLRLSPQKFFFKILI 200 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG A G AW A I +E+ G + G+G +I ++ ++ E++L V Sbjct: 201 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILAV 255 Query: 560 LIMCCFVLALNR 571 + L L+R Sbjct: 256 FYIGAVGLLLDR 267 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 13/162 (8%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L L PI ++ + L ++ +V P AAIF IF + VW + + Sbjct: 119 LDKALDPIFQFLRMVAPLAWVPIALVALQQNQP--------AAIFVIFITSVWPILINTT 170 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V + RLS + F+ + +P ++P + + +++ W ++A+E+++ Sbjct: 171 EGVKQIPQDYINVRKVLRLSPQKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMS 230 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 G + GIG +I A ++ + I+ A+ + V L D+ Sbjct: 231 G-----IVGIGFFIWDAYQQNYISEIILAVFYIGAVGLLLDR 267 >gi|22299544|ref|NP_682791.1| bicarbonate transport system permease protein [Thermosynechococcus elongatus BP-1] gi|22295727|dbj|BAC09553.1| bicarbonate transport system permease protein [Thermosynechococcus elongatus BP-1] Length = 324 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV +A+++ I +GI +G ++ + P Q L + PL +S Sbjct: 133 ISLTRVAQGYGLAAVVGITLGILVGTSKTLNKALDPIFQFL-----RMVAPLAWVPISLA 187 Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L N ++ +IF T W IL N G P D+K V+ ++ ++ I+LP Sbjct: 188 ALRQNEPAAIFVIFITSIWPILINTAVGVREIPQDYKNVSRVLRLSKQTFFLKILLPSAL 247 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 PY TG A G AW A I +E+ G G+G +I ++ ++ E+++ V+ + Sbjct: 248 PYIFTGLRIAIGLAWLAIIAAEIVMSG-----VAGIGFFIWDAYQQNYVTEIIVAVVYIG 302 Query: 564 CFVLALNRFL 573 L L+R + Sbjct: 303 AIGLILDRLV 312 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 17/203 (8%) Query: 61 LPQYASRTTL----RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 L Q +R TL R+ ++ + L S+ L L PI ++ + L ++ Sbjct: 123 LDQGLARQTLISLTRVAQGYGLAAVVGITLGILVGTSKTLNKALDPIFQFLRMVAPLAWV 182 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ P AAIF IF + +W + + + IP+D + VSR RLS Sbjct: 183 PISLAALRQNEP--------AAIFVIFITSIWPILINTAVGVREIPQDYKNVSRVLRLSK 234 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 F + +P ++P + + +++ W ++A+E+++ G + GIG +I A ++ Sbjct: 235 QTFFLKILLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----VAGIGFFIWDAYQQN 289 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 + I+ A++ + + + D+L+ Sbjct: 290 YVTEIIVAVVYIGAIGLILDRLV 312 >gi|170076486|ref|YP_001733125.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Synechococcus sp. PCC 7002] gi|169887348|gb|ACB01056.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Synechococcus sp. PCC 7002] Length = 279 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 8/124 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR + + PI+ I++ + L +L + F GAE +AIF IF + +W+ Sbjct: 113 SRNAWLAINPIIQILKPVSPLVWLPIALSIFN--------GAEPSAIFVIFITSLWSTII 164 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + + +PRD EV+R + W++ W + +P S+P + + +SM W +VA EM Sbjct: 165 NTAEGVAQVPRDYLEVARMLEMPRWKQLWRVILPASLPYIFTGLRISMGVAWLVIVAVEM 224 Query: 213 IVVG 216 + G Sbjct: 225 LTGG 228 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 12/186 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV++ I+ +++ IPVGIWIG + I P Q+L V+ P+ +S + P Sbjct: 91 RVIIGFILGALVAIPVGIWIGLSRNAWLAINPIIQILKPVSPLVWLPIALSI--FNGAEP 148 Query: 449 NLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + ++ +IF T W + N G + P D+ EVA + W+ +ILP PY Sbjct: 149 S---AIFVIFITSLWSTIINTAEGVAQVPRDYLEVARMLEMPRWKQLWRVILPASLPYIF 205 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G AW + E+ + G G+G ++ + + + V L V ++ L Sbjct: 206 TGLRISMGVAWLVIVAVEMLTGG------IGIGFFVWDEWNRLNVSSVFLAVFVIGITGL 259 Query: 568 ALNRFL 573 L+ L Sbjct: 260 ILDSAL 265 >gi|192362345|ref|YP_001981051.1| nitrate ABC transporter permease [Cellvibrio japonicus Ueda107] gi|190688510|gb|ACE86188.1| nitrate ABC transporter permease protein [Cellvibrio japonicus Ueda107] Length = 291 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + +P +AIF IF + +W + + + Sbjct: 132 LDPIFQVLRTVPPLAWLPLSLAGFQDSHP--------SAIFVIFITSIWPIIINTSVGVR 183 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP D V+R +L GWQ F+ + +P + P + + + + W +VA+EM+V G Sbjct: 184 NIPMDYRNVARVIQLPGWQYFYKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLVGG--- 240 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V F D+L+ Sbjct: 241 ---VGIGFFIWDAWNSSRISDIILALIYVGLVGFALDRLV 277 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV V +A I + +GI +G + P Q+L P + PL S Sbjct: 95 WQILASLKRVAVGYTLAVIAGVALGILVGQSLWAMRGLDPIFQVLRTVPPLAWLPL--SL 152 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + +P+ ++ +IF T W I+ N G P D++ VA + GW+++ I+L Sbjct: 153 AGFQDSHPS---AIFVIFITSIWPIIINTSVGVRNIPMDYRNVARVIQLPGWQYFYKIML 209 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY +G G +W A + +E+ G G+G +I ++ +++L + Sbjct: 210 PAAAPYIFSGLRIGVGLSWLAIVAAEMLVGG------VGIGFFIWDAWNSSRISDIILAL 263 Query: 560 LIMCCFVLALNRFL 573 + + AL+R + Sbjct: 264 IYVGLVGFALDRLV 277 >gi|2501375|sp|Q51881|NRTB_PHOLA RecName: Full=Nitrate transport permease protein nrtB gi|887567|emb|CAA79657.1| hydrophobic protein [Geitlerinema sp. PCC 8501] Length = 279 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV V ++A+I I +GI IG + + P Q+L P + P +S Sbjct: 84 WQIAASLQRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLP--ISL 141 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ P ++ +IF T W I+ N G P D+ VA ++ ++ ++L Sbjct: 142 AAFRDSQPA---AIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDYFLKVLL 198 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG A G +W A + +E+ + G G+G +I ++ GS EV+L + Sbjct: 199 PATVPYIFTGLKIAIGLSWLAIVAAEMLTGG------VGIGFFIWDAYNSGSNSEVILAI 252 Query: 560 LIMCCFVLALN 570 + + L LN Sbjct: 253 IYVGLVGLLLN 263 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 8/117 (6%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P AAIF IF + +W + + + Sbjct: 121 LDPIFQVLRTVPPLAWLPISLAAFRDSQP--------AAIFVIFITAIWPIIINTAVGVQ 172 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 NIP+D V+R +LS F + +P ++P + + +++ W +VA+EM+ G Sbjct: 173 NIPQDYNNVARVLKLSRLDYFLKVLLPATVPYIFTGLKIAIGLSWLAIVAAEMLTGG 229 >gi|227819750|ref|YP_002823721.1| Nitrate transport permease NrtB [Sinorhizobium fredii NGR234] gi|227338749|gb|ACP22968.1| Nitrate transport permease protein NrtB [Sinorhizobium fredii NGR234] Length = 297 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 84/160 (52%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDGNP--------SAIFVIFITAIWPIIINTAVGIR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D + V+R RL+G++ F + +P + P + + + + W +VA+EM++ G Sbjct: 190 NIPQDYQNVARVLRLNGFEYFAKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV-- 247 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V FL D+L+ Sbjct: 248 ----GIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLI 283 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 6/142 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+ + I +G+ +G + P Q+L P + PL S ++ Sbjct: 106 SLQRVALGYAMAAAVGIALGVLVGQSALAMRGLDPIFQVLRTVPPLAWLPL--SLAAFQD 163 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP+ ++ +IF T W I+ N G P D++ VA + G+ ++ I+LP P Sbjct: 164 GNPS---AIFVIFITAIWPIIINTAVGIRNIPQDYQNVARVLRLNGFEYFAKIMLPAAAP 220 Query: 505 YYVTGAITACGGAWNASIVSEV 526 Y TG G +W A + +E+ Sbjct: 221 YIFTGLRIGIGLSWLAIVAAEM 242 >gi|307309035|ref|ZP_07588715.1| nitrate ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306900508|gb|EFN31122.1| nitrate ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 297 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 14/173 (8%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 TL +S L PI +++++P L +L ++ F + P +AIF IF + Sbjct: 125 GTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDGTP--------SAIFVIFITA 176 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + + NIP+D + V++ RL+G++ F + +P + P + + + + W Sbjct: 177 IWPIIINTAVGIRNIPQDYQNVAKVLRLNGFEYFGKIMLPAAAPYIFTGLRIGIGLSWLA 236 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +VA+EM++ G GIG +I A + I+ A++ + V FL D+L+ Sbjct: 237 IVAAEMLIGGV------GIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLM 283 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 6/142 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+ + + +G +G + P Q+L P + PL S ++ Sbjct: 106 SLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL--SLAAFQD 163 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ ++ +IF T W I+ N G P D++ VA + G+ ++ I+LP P Sbjct: 164 GTPS---AIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNGFEYFGKIMLPAAAP 220 Query: 505 YYVTGAITACGGAWNASIVSEV 526 Y TG G +W A + +E+ Sbjct: 221 YIFTGLRIGIGLSWLAIVAAEM 242 >gi|149377870|ref|ZP_01895600.1| putative nitrate transporter [Marinobacter algicola DG893] gi|149357872|gb|EDM46364.1| putative nitrate transporter [Marinobacter algicola DG893] Length = 331 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A+II +P+GI IG H S+ I P Q+ + PLV VS Y +P Sbjct: 138 VLATIIAVPLGIIIGLNRHFSAAINPLIQIFKPVSPLAWLPLVTMVVSATYVSDDPMFEK 197 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L + + W L N G SA D V+ ++ W R ++LP P Sbjct: 198 SFLTSMITVTLCSLWPTLINTSVGVSAVNPDLLNVSKVLQLSFWTHVRKVVLPSSVPMIF 257 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + ++ GLG ++ + + GS Sbjct: 258 TGLRVSLGIAWMVLIAAEMLA------QSPGLGKFVWDEFQNGS 295 >gi|222082145|ref|YP_002541510.1| nitrate ABC transporter [Agrobacterium radiobacter K84] gi|221726824|gb|ACM29913.1| nitrate ABC transporter [Agrobacterium radiobacter K84] Length = 297 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 16/161 (9%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI I++++P L +L ++ F N P +AIF IF + +W + + + Sbjct: 138 LDPIFQILRTVPPLAWLPLSLAAFQNSSP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+R RL+ + F+ + VP + P + + + + W +VA+EM+ G Sbjct: 190 NIPQDYRNVARVLRLNQIEFFFRIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 247 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259 GIG +I A L I+ A LT +G+ F+ D+L+ Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVA-LTYIGITGFILDKLV 283 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 13/187 (6%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 QD+ + W I++ RV +A+I + +G IG + P Q+L P + Sbjct: 95 QDI-GLAWRVLISLQRVAYGFGLAAIAGVLIGALIGQSIWAMRGLDPIFQILRTVPPLAW 153 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492 PL S ++ + +P+ ++ +IF T W ++ N G P D++ VA + Sbjct: 154 LPL--SLAAFQNSSPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNVARVLRLNQIE 208 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++ I++P PY TG G +W A + +E+ + G G+G +I ++ Sbjct: 209 FFFRIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRL 262 Query: 553 PEVVLGV 559 P++++ + Sbjct: 263 PDIIVAL 269 >gi|254503979|ref|ZP_05116130.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222440050|gb|EEE46729.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 360 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 18/217 (8%) Query: 368 VNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + H TY Y+ +G ++ V + +IA+II +P+GI G + I P Q+ Sbjct: 138 IKHRTYTGKPTYIDQIGT-SLLTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFK 196 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG-------TQWYILFNVIAGASAFPNDF 479 + P+V VS + NP WLS ++ + W L N G ++ D Sbjct: 197 PVSPLAWLPIVTMIVSATYANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDL 256 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 V + W+ ++LP P TG + G W I +E+ + + GL Sbjct: 257 MNVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGL 310 Query: 540 GAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 G ++ + + G S ++++ VL + L+R + Sbjct: 311 GKFVWDEFQNGSSQSLAKIMVAVLTIGLIGFMLDRLM 347 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL V R +L W+ L +P S+P + + +S+ GW Sbjct: 238 MWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMV 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + Q L I+ A+LT+ + F+ D+L+F Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMVAVLTIGLIGFMLDRLMF 348 >gi|188996007|ref|YP_001930258.1| nitrate ABC transporter, inner membrane subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|188931074|gb|ACD65704.1| nitrate ABC transporter, inner membrane subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 256 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 10/161 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ +I S+I IPVG +G +++ Q+L +FP+ ++ Sbjct: 70 SLKRVILGFLIGSLIGIPVGFILGVFGRLNAMFNSLIQILRPVSPLAWFPIGLALFQNSE 129 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +++ I W L N GAS P DFK V+ F + ++RY+++P F + Sbjct: 130 KASIFTIAITSI----WPTLINTAYGASTIPQDFKNVSKVFGFSILNYFRYVVVPYTFSF 185 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 +TG + G AW + SE+ + G TG+G YI +S Sbjct: 186 TLTGLKISIGIAWMVIVASEMLAGG------TGIGFYIWDS 220 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RL + ++ I++ + L + + F N +E A+IF I + +W + Sbjct: 97 RLNAMFNSLIQILRPVSPLAWFPIGLALFQN--------SEKASIFTIAITSIWPTLINT 148 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 IP+D + VS+ F S F Y+ VP++ + + +S+ W +VASEM+ Sbjct: 149 AYGASTIPQDFKNVSKVFGFSILNYFRYVVVPYTFSFTLTGLKISIGIAWMVIVASEMLA 208 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 G GIG YI + +L ++ A++ ++GVI Sbjct: 209 GGT------GIGFYIWDSWNALNLRNVMSAII-LIGVI 239 >gi|218440457|ref|YP_002378786.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218173185|gb|ACK71918.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 280 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+I+ I +G+ IG P + + P Q+L P + P +S Sbjct: 85 WQLLASLQRVGIGFSLAAIVGISLGVLIGANPLMYDALDPIFQVLRTIPPLAWLP--ISL 142 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ +P+ ++ +IF T W I+ N G P D++ V+ ++ ++ I++ Sbjct: 143 AAFRQSDPS---AIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKVEYFFNILI 199 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ +++L + Sbjct: 200 PSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDAYNSSRLGQIILAL 253 Query: 560 LIMCCFVLALNRFL 573 + + L L+R + Sbjct: 254 IYVGVVGLLLDRLV 267 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI ++++IP L +L ++ F P +AIF IF + +W + + + Sbjct: 122 LDPIFQVLRTIPPLAWLPISLAAFRQSDP--------SAIFVIFITAIWPIIINTTVGVQ 173 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP+D VSR +LS + F+ + +P ++P + + + + W +VA+EM+V G Sbjct: 174 QIPQDYRNVSRVLQLSKVEYFFNILIPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV-- 231 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A++ + V L D+L+ Sbjct: 232 ----GIGFFIWDAYNSSRLGQIILALIYVGVVGLLLDRLV 267 >gi|307151074|ref|YP_003886458.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306981302|gb|ADN13183.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 279 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 14/228 (6%) Query: 363 SIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 ++ YI N F + L + WL ++ RV++ ++++++ IPVG IG S + P Sbjct: 62 NLDYIFNPFYVRGPGNLGIGWLLIASLRRVLIGFVLSAMVAIPVGFLIGMSKPAMSALNP 121 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDF 479 Q+ + P +S + +P+ ++ +IF T W + N G S+ +D+ Sbjct: 122 VIQIFKPVSPLAWLP--ISLAIFNQADPS---AIFVIFITSLWPTIINTALGVSSVNSDY 176 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 +VA + WR IILP PY TG + G AW + E+ + G G+ Sbjct: 177 LDVAKVLEMPRWRQIYKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------LGI 230 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G ++ + + + V L VL++ L L+ L L R +L Sbjct: 231 GFFVWDEWNRLNLNSVFLAVLVIGLTGLLLDYILGQIQVLVTHRKAKL 278 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L V+S + L S+ L P++ I + + L +L ++ F Sbjct: 90 RVLIGFVLSAMVAIPVGFLIGMSKPAMSALNPVIQIFKPVSPLAWLPISLAIFNQ----- 144 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A+ +AIF IF + +W + + ++ D +V++ + W++ + + +P S+P Sbjct: 145 ---ADPSAIFVIFITSLWPTIINTALGVSSVNSDYLDVAKVLEMPRWRQIYKIILPASLP 201 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216 + + +S+ W +VA EM+ G Sbjct: 202 YIFTGLRISLGIAWLVIVAVEMLTGG 227 >gi|307153749|ref|YP_003889133.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306983977|gb|ADN15858.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 280 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ I VG+ IG P + + P Q+L P + P +S Sbjct: 85 WQILASLQRVGIGFSLAALVGISVGVLIGASPLMYDALDPIFQVLRTIPPLAWLP--ISL 142 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ +P+ ++ +IF T W I+ N G P D++ V+ ++ ++ I++ Sbjct: 143 AAFRQSDPS---AIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKIEYFFNILI 199 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ +++L + Sbjct: 200 PSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDAYNSSRLGQIILAL 253 Query: 560 LIMCCFVLALNRFL 573 + + L L+R + Sbjct: 254 IYVGVVGLLLDRMV 267 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI ++++IP L +L ++ F P +AIF IF + +W + + + Sbjct: 122 LDPIFQVLRTIPPLAWLPISLAAFRQSDP--------SAIFVIFITAIWPIIINTTVGVQ 173 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP+D VSR +LS + F+ + +P ++P + + + + W +VA+EM+V G Sbjct: 174 QIPQDYRNVSRVLQLSKIEYFFNILIPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV-- 231 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A++ + V L D+++ Sbjct: 232 ----GIGFFIWDAYNSSRLGQIILALIYVGVVGLLLDRMV 267 >gi|254426861|ref|ZP_05040568.1| ABC transporter, permease protein [Alcanivorax sp. DG881] gi|196193030|gb|EDX87989.1| ABC transporter, permease protein [Alcanivorax sp. DG881] Length = 333 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 15/198 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++AS+I IP+GI+IG + + P QL + PLV VS Y +P + Sbjct: 135 LLASVIAIPLGIFIGLSNTAHAAMNPLIQLFKPVSPLAWLPLVTMVVSAVYVTDDPLVAK 194 Query: 453 SLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L T W L N G ++ D V+ + R I+LP P Sbjct: 195 SFLTSMFTVTLCCLWPTLMNTAVGVTSVSQDLTNVSKVLRLNALSHVRKIVLPSALPMMF 254 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G AW I +E+ + + GLG ++ + + GS LG +++ V+ Sbjct: 255 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LGRIMVAVIVI 306 Query: 568 ALNRFLWHPLYLYGTRCL 585 L FL L L R L Sbjct: 307 GLIGFLLDRLMLMLQRAL 324 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 12/144 (8%) Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 L ++F + +W + + ++ +DL VS+ RL+ + +P ++P + Sbjct: 197 LTSMFTVTLCCLWPTLMNTAVGVTSVSQDLTNVSKVLRLNALSHVRKIVLPSALPMMFTG 256 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVI 252 + +S+ W ++A+EM+ PG+G ++ + Q L I+ A++ + + Sbjct: 257 LRLSLGIAWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLGRIMVAVIVIGLIG 310 Query: 253 FLYDQ--LLFRPMIVWSNKFRLER 274 FL D+ L+ + +VW +K ++R Sbjct: 311 FLLDRLMLMLQRALVW-DKSSVQR 333 >gi|290559723|gb|EFD93048.1| ABC-type anion transport system permease component [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 128 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ++F ++A P++ E+ FH+ G W+ I L I P +TGA+T WNASI+ Sbjct: 3 VIFAIVATTKYMPSNISEIKKIFHLKGITAWKKIYLKAIIPGVITGAVTGIAAEWNASII 62 Query: 524 SEVASWGHIHLRTT---GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +E S G + T+ G+G + + + + +V+ + M ++ +N F+W LY Sbjct: 63 AEYFSVGSGKVITSVNIGVGKALNLALKNNNLTLMVILLANMVLMIMLINYFIWRRLY 120 >gi|73661766|ref|YP_300547.1| nitrate/sulfonate/bicarbinate ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494281|dbj|BAE17602.1| putative ABC-type nitrate sulfonate taurine bicarbonate transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 253 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 12/190 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++FR +V ++A +I +P+G +G + I+P QL+ + P VV Sbjct: 62 ISLFRFIVGFVLAILIGVPIGFLLGRVNALFHAIEPLLQLIRPISPIAWSPFVVLWFGIG 121 Query: 445 HLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L ++ +IF ++ I+FN I G + ++AS+ ++TGW+ ++ I+ PG F Sbjct: 122 SLP-----AMAIIFIAAFFPIVFNTIKGIRHIEPQYLKIASNLNLTGWQLYKNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KHIMGGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 8/146 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R + V+++L L + L + P+L +++ I + + F V++F Sbjct: 63 SLFRFIVGFVLAILIGVPIGFLLGRVNALFHAIEPLLQLIRPISPIAWSPFVVLWFG--- 119 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG+ L A+ IF + + + F+ + + +I +++ + L+GWQ + + P Sbjct: 120 ----IGS-LPAMAIIFIAAFFPIVFNTIKGIRHIEPQYLKIASNLNLTGWQLYKNILFPG 174 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213 + ++ + M++ W F+V+ EMI Sbjct: 175 AFKHIMGGIHMAVGTSWIFLVSGEMI 200 >gi|299133917|ref|ZP_07027111.1| nitrate ABC transporter, inner membrane subunit [Afipia sp. 1NLS2] gi|298591753|gb|EFI51954.1| nitrate ABC transporter, inner membrane subunit [Afipia sp. 1NLS2] Length = 299 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI ++++IP L +L ++ F + P +AIF IF + +W + + + Sbjct: 140 LDPIFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIR 191 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ ++ FW + +P + P + + + + W ++A+EM++ G Sbjct: 192 NIPQDYRNVAAVVRLNPFEFFWKIMIPSAAPYIFTGLRIGIGLSWLAIIAAEMLIGGV-- 249 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V F+ D+++ Sbjct: 250 ----GIGFFIWDAWNSSHISEIILALVYVGIVGFILDRMI 285 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+I I +G +G + P Q+L P + PL S Sbjct: 103 WHLSASLQRVALGYSLAAIAGIALGTLVGQSIWAMRGLDPIFQVLRTIPPLAWLPL--SL 160 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ P+ ++ +IF T W I+ N G P D++ VA+ + + ++ I++ Sbjct: 161 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPFEFFWKIMI 217 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A I +E+ G G+G +I ++ E++L + Sbjct: 218 PSAAPYIFTGLRIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILAL 271 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 272 VYVGIVGFILDRMI 285 >gi|209546549|ref|YP_002278467.1| nitrate ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537793|gb|ACI57727.1| nitrate ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 297 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ ++ FW + +P + P + + + + W +VA+EM+ G Sbjct: 190 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV-- 247 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A+ + V F+ D+L+ Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVALAYIGIVGFVLDKLV 283 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 32/234 (13%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 SY L + F IG+ W+ + + Q VLY L +T V++ II + Sbjct: 81 SYDLIAYPFFNNGSQDIGLGWRVL------VSLQRVLYGFGLAAVT--GVIIGAIIGQSV 132 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 W G+ P Q+L P + PL S ++ NP+ ++ +IF T Sbjct: 133 WAMRGL------------DPIFQVLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFIT 175 Query: 461 Q-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 W ++ N G P D++ VA + + ++ I+LP PY TG G +W Sbjct: 176 SIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWL 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 A + +E+ + G G+G +I ++ P++++ + + L++ + Sbjct: 236 AIVAAEMLTGG------VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFVLDKLV 283 >gi|300866337|ref|ZP_07111039.1| nitrate transport permease protein [Oscillatoria sp. PCC 6506] gi|300335664|emb|CBN56199.1| nitrate transport permease protein [Oscillatoria sp. PCC 6506] Length = 290 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 9/163 (5%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG---AELAAIFAIFTSQVWNMTFSMYQ 156 L PI ++++IP L +L ++ F P + +G +E++A+F I + +W + + Sbjct: 121 LDPIFQVLRTIPPLAWLPISLGAFQQFNPFEGMGITTSEVSALFVILITAIWPIIINTTV 180 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + IP+D V+R RL + FW + +P ++P + + + + W +VA+EM+V G Sbjct: 181 GVQQIPQDYRNVARVLRLPRQKYFWKILLPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG 240 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I + L ++ A++ + V L D+L+ Sbjct: 241 V------GIGFFIWDSYNSSRLSHVILAVIYVGIVGLLLDRLV 277 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 17/202 (8%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+I+ I +GI IG + + P Q+L P + P +S Sbjct: 84 WQLLASLQRVAIGFTLAAILGISLGILIGTNSLMFDALDPIFQVLRTIPPLAWLP--ISL 141 Query: 441 VSYYHLNPNLWLSL---------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 ++ NP + + +++ W I+ N G P D++ VA + Sbjct: 142 GAFQQFNPFEGMGITTSEVSALFVILITAIWPIIINTTVGVQQIPQDYRNVARVLRLPRQ 201 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +++ I+LP PY TG G +W A + +E+ G G+G +I +S Sbjct: 202 KYFWKILLPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDSYNSSR 255 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 V+L V+ + L L+R + Sbjct: 256 LSHVILAVIYVGIVGLLLDRLV 277 >gi|166364220|ref|YP_001656493.1| nitrate/nitrite transport system permease protein [Microcystis aeruginosa NIES-843] gi|166086593|dbj|BAG01301.1| nitrate/nitrite transport system permease protein [Microcystis aeruginosa NIES-843] Length = 275 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+I+ I VGI IG I I P Q+L P + P +S ++ + Sbjct: 85 SLQRVAVGFTLAAIVGIAVGILIGSNALIYDAIDPIFQILRTVPPLAWLP--ISLAAFRN 142 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ ++ +IF T W I+ N G P D+K V+ ++ ++ I+ P P Sbjct: 143 NEPS---AIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEYFFNILFPATVP 199 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E++L ++ + Sbjct: 200 YVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSMISEIILALIYVGI 253 Query: 565 FVLALNRFL 573 L+R + Sbjct: 254 VGFLLDRLM 262 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI I++++P L +L ++ F N P +AIF IF + +W + + + + Sbjct: 119 PIFQILRTVPPLAWLPISLAAFRNNEP--------SAIFVIFITAIWPIIINTAVGVQQV 170 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D + VSR +LS + F+ + P ++P + + + + W +VA+EM++ G Sbjct: 171 PQDYKNVSRVLKLSKVEYFFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV---- 226 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V FL D+L+ Sbjct: 227 --GIGFFIWDAWNSSMISEIILALIYVGIVGFLLDRLM 262 >gi|218672619|ref|ZP_03522288.1| nitrate ABC transporter, permease protein [Rhizobium etli GR56] Length = 246 Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 87 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 138 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ ++ FW + +P + P + + + + W +VA+EM+ G Sbjct: 139 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG--- 195 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A+ + V F+ D+L+ Sbjct: 196 ---VGIGFFIWDAWNSSRLSDIIVALAYIGIVGFVLDKLV 232 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 12/157 (7%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476 + P Q+L P + PL S ++ NP+ ++ +IF T W ++ N G P Sbjct: 87 LDPIFQVLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIP 141 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D++ VA + + ++ I+LP PY TG G +W A + +E+ + G Sbjct: 142 QDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------ 195 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ ++++ + + L++ + Sbjct: 196 VGIGFFIWDAWNSSRLSDIIVALAYIGIVGFVLDKLV 232 >gi|159898858|ref|YP_001545105.1| nitrate ABC transporter inner membrane subunit [Herpetosiphon aurantiacus ATCC 23779] gi|159891897|gb|ABX04977.1| nitrate ABC transporter, inner membrane subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 282 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 10/173 (5%) Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+G+ +G + + P ++L ++PL ++ H P + ++ Sbjct: 104 IAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPL---GLAVLHNAPKA-VVFAIVIT 159 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + W L N G P D K V+ F + WR+ ++LP FP +TG + G AW Sbjct: 160 SLWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGIAWM 219 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + E+ + G TGLG ++ +S S V+ +L++ LAL+R Sbjct: 220 VIVAGEMLAGG------TGLGFFVWDSWNALSLERVMSAILVIGITGLALDRL 266 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 21/203 (10%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + I + L S L +L P+++I++ + L + + N Sbjct: 93 RVFTGWGIGIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVLHN----- 147 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A A +FAI + +W + + NIP DL+ VS+ FR S W+ + +P + P Sbjct: 148 ---APKAVVFAIVITSLWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFP 204 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG-----SYIALAIKEQDLLAILYAM 245 ++ M +SM W +VA EM+ G G+G S+ AL++ E+ + AIL Sbjct: 205 AILTGMRLSMGIAWMVIVAGEMLAGGT------GLGFFVWDSWNALSL-ERVMSAILVIG 257 Query: 246 LTMLGVIFLYDQLLFRPMIVWSN 268 +T L + L+ L+ + M W Sbjct: 258 ITGLALDRLFS-LIGQRMAAWQE 279 >gi|116254785|ref|YP_770621.1| putative nitrate transporter permease component [Rhizobium leguminosarum bv. viciae 3841] gi|115259433|emb|CAK10571.1| putative nitrate transporter permease component [Rhizobium leguminosarum bv. viciae 3841] Length = 297 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ ++ FW + +P + P + + + + W +VA+EM+ G Sbjct: 190 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG--- 246 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A+ + V F D+L+ Sbjct: 247 ---VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%) Query: 361 WQS----IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 WQ I Y ++ QD+ + W I++ RV+ +A++ + VG IG Sbjct: 78 WQDSYDLIAYPFFNYGSQDI-GLGWRVLISLQRVLYGFGLAAVTGVIVGAIIGQSVWAMR 136 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAF 475 + P Q+L P + PL S ++ NP+ ++ +IF T W ++ N G Sbjct: 137 GLDPIFQVLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNI 191 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D++ VA + + ++ I+LP PY TG G +W A + +E+ + G Sbjct: 192 PQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG----- 246 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ P++++ + + AL++ + Sbjct: 247 -VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 >gi|241554242|ref|YP_002979455.1| nitrate ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863548|gb|ACS61210.1| nitrate ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 297 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ ++ FW + +P + P + + + + W +VA+EM+ G Sbjct: 190 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG--- 246 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A+ + V F D+L+ Sbjct: 247 ---VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 13/211 (6%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 I Y ++ QD+ + W I++ RV+ +A++ + +G IG + P Q Sbjct: 85 IAYPFFNYGSQDI-GLGWRVLISLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLDPIFQ 143 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEV 482 +L P + PL S ++ NP+ ++ +IF T W ++ N G P D++ V Sbjct: 144 VLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNV 198 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A + + ++ I+LP PY TG G +W A + +E+ + G G+G + Sbjct: 199 AEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFF 252 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 I ++ P++++ + + AL++ + Sbjct: 253 IWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 >gi|16262759|ref|NP_435552.1| nitrate ABC transporter permease [Sinorhizobium meliloti 1021] gi|14523389|gb|AAK64964.1| Nitrate transporter, permease [Sinorhizobium meliloti 1021] Length = 297 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 14/173 (8%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 TL +S L PI +++++P L +L ++ F + P +AIF IF + Sbjct: 125 GTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDGTP--------SAIFVIFITA 176 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + + NIP+D + V++ RL+ ++ F + +P + P + + + + W Sbjct: 177 IWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAPYIFTGLRIGIGLSWLA 236 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +VA+EM++ G GIG +I A + I+ A++ + V FL D+L+ Sbjct: 237 IVAAEMLIGGV------GIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLI 283 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 6/142 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+ + + +G +G + P Q+L P + PL S ++ Sbjct: 106 SLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL--SLAAFQD 163 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ ++ +IF T W I+ N G P D++ VA + + ++ I+LP P Sbjct: 164 GTPS---AIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAP 220 Query: 505 YYVTGAITACGGAWNASIVSEV 526 Y TG G +W A + +E+ Sbjct: 221 YIFTGLRIGIGLSWLAIVAAEM 242 >gi|22298894|ref|NP_682141.1| nitrate/nitrite transport system permease protein [Thermosynechococcus elongatus BP-1] gi|22295075|dbj|BAC08903.1| nitrate/nitrite transport system permease protein [Thermosynechococcus elongatus BP-1] Length = 281 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 12/192 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A++I + +G+ IG + + P Q+L P + P+ ++ Sbjct: 84 WQILTSLRRVAIGFSLAAMIGVGLGMLIGSSRALYDAVDPILQVLRPVPPLAWLPIALAA 143 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 L N ++ +IF T W I+ N I G P D+K VA ++ ++ I++ Sbjct: 144 -----LRDNEPAAIFVIFITAIWPIIINTIVGVQQIPKDYKNVARVLRLSRKDYFLNILV 198 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ E+++ V Sbjct: 199 PATVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISEIIVAV 252 Query: 560 LIMCCFVLALNR 571 + + L L+R Sbjct: 253 IYVGIVGLVLDR 264 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 8/128 (6%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L SR L + PIL +++ +P L +L + + P AAIF IF + +W Sbjct: 110 LIGSSRALYDAVDPILQVLRPVPPLAWLPIALAALRDNEP--------AAIFVIFITAIW 161 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + + IP+D + V+R RLS F + VP ++P + + + + W +V Sbjct: 162 PIIINTIVGVQQIPKDYKNVARVLRLSRKDYFLNILVPATVPYVFTGLRIGIGLSWLAIV 221 Query: 209 ASEMIVVG 216 A+EM++ G Sbjct: 222 AAEMLIGG 229 >gi|294339047|emb|CAZ87396.1| Glycine betaine transport system permease protein opuAB [Thiomonas sp. 3As] Length = 286 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 17/173 (9%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +L+A V+ +L L+AKSR L L P+LDIMQ++P +L V++F + Sbjct: 98 KTLALVLAAEVLVILIGVPTGILSAKSRLLEKTLRPVLDIMQTMPAFVYLVPAVIFFGLG 157 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L PG + IFA+ + T + Q +P +L E ++SF + WQ + + Sbjct: 158 LVPGVIS----TTIFAL-PPLIRLTTLGIRQ----VPHELVEATQSFGATWWQLLTKVQI 208 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 P ++P ++ + S+ G VV S MI G G+G+ + I + D+ Sbjct: 209 PSALPSIMAGVNQSIMLGLSMVVISAMIGAG-------GLGNVVLEGITQLDV 254 >gi|260892265|ref|YP_003238362.1| binding-protein-dependent transport systems inner membrane component [Ammonifex degensii KC4] gi|260864406|gb|ACX51512.1| binding-protein-dependent transport systems inner membrane component [Ammonifex degensii KC4] Length = 245 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 10/179 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ +R++ + +A+ +P+G+++G P + PF L+ P V PL++ Sbjct: 54 VSTYRILAGMFLATTTAVPLGLFLGRCPRADRLLGPFFSLIYPVPKIVLVPLIMVVFGLG 113 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L ++L++ F IL V GA + +S + G ++R+++ P + P Sbjct: 114 DAAKILLITLVLFF----QILLPVRDGARHLSPYLVDAVTSLGVRGLAFYRHVVFPAVLP 169 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 +TG A G A +E + GLG Y+ ++ + ++P++ GVL M Sbjct: 170 EVLTGLRVASGTAIAVLFFAETIA------SQEGLGYYLLDAWTRYAYPDLYAGVLAMS 222 >gi|282898754|ref|ZP_06306741.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] gi|281196281|gb|EFA71191.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] Length = 283 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 15/195 (7%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+I+ + +GI IG + + + P Q+L P + P +S Sbjct: 85 WQILTSLGRVGLGFSLATIVGVFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLP--ISL 142 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ NP+ ++ +IF T W IL N G P D+ VA + +++ I+ Sbjct: 143 AAFQQANPS---AIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQVKYFLKIVF 199 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE---STEKGSFPEVV 556 P PY TG G +W A + +E+ G G+G++I + +T + E++ Sbjct: 200 PATVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGSFIWDAYNTTTDTNLSEII 253 Query: 557 LGVLIMCCFVLALNR 571 + ++ + L L+R Sbjct: 254 IALIYVGIVGLMLDR 268 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 14/141 (9%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L +R L + PI ++++IP L +L ++ F P +AIF IF + +W Sbjct: 111 LIGANRFLYNAVDPIFQVLRTIPPLAWLPISLAAFQQANP--------SAIFVIFITSIW 162 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + + NIP+D V+R RL + F + P ++P + + + + W +V Sbjct: 163 PILINTTVGVQNIPQDYVNVARVLRLRQVKYFLKIVFPATVPYIFTGLRIGIGLSWLAIV 222 Query: 209 ASEMIVVGDTVIPLPGIGSYI 229 A+EM+V G GIGS+I Sbjct: 223 AAEMLVGG------VGIGSFI 237 >gi|71282501|ref|YP_269991.1| putative nitrate ABC transporter permease [Colwellia psychrerythraea 34H] gi|71148241|gb|AAZ28714.1| putative nitrate ABC transporter, permease protein [Colwellia psychrerythraea 34H] Length = 315 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443 ++F V ++A+II IP+GIW+G ++S I P Q+ + PLV VS Y Sbjct: 108 SLFTVTCGFLVAAIIAIPLGIWMGLNKRLNSAINPIVQIFKPVSPLAWLPLVTMVVSALY 167 Query: 444 YHLNPNLWLSLLMIFGTQ-----WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 +P + S L T W ++ N G S+ +D V+ + + I+ Sbjct: 168 VSDDPMVSKSFLTSLITVSLCSLWPMVINTSIGVSSIDSDLLNVSKVLRLPTLTHIKKIV 227 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +P P TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 228 IPASIPMIFTGMRLSFGVAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 274 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 12/175 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWN 149 ++RL + PI+ I + + L +L + LY V + L ++ + +W Sbjct: 133 NKRLNSAINPIVQIFKPVSPLAWLPLVTMVVSALYVSDDPMVSKSFLTSLITVSLCSLWP 192 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 M + + +I DL VS+ RL + +P S+P + M +S W ++A Sbjct: 193 MVINTSIGVSSIDSDLLNVSKVLRLPTLTHIKKIVIPASIPMIFTGMRLSFGVAWMVLIA 252 Query: 210 SEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261 +EM+ PG+G ++ D LA + A + ++G I FL D+ + Sbjct: 253 AEMLAQN------PGLGKFVWDEFQNGSSDSLARIMAAVIVIGFIGFLLDRAMLE 301 >gi|86361183|ref|YP_473070.1| nitrate ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86285285|gb|ABC94343.1| nitrate ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 297 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ ++ FW + +P + P + + + + W +VA+EM+ G Sbjct: 190 NIPQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG--- 246 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A+ + V F D+L+ Sbjct: 247 ---VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 17/218 (7%) Query: 361 WQS----IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 WQ I Y ++ QD+ + W +++ RV +A++ + VG IG Sbjct: 78 WQDSYDLIAYPFFNYGSQDI-GLGWRVLVSLQRVAYGFGLAAVTGVIVGAIIGQSVWAMR 136 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAF 475 + P Q+L P + PL S ++ NP+ ++ +IF T W ++ N G Sbjct: 137 GLDPIFQVLRTVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNI 191 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D++ VA + + ++ I+LP PY TG G +W A + +E+ + G Sbjct: 192 PQDYRNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG----- 246 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ P++++ + + AL++ + Sbjct: 247 -VGIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 >gi|317049860|ref|YP_004117508.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316951477|gb|ADU70952.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 277 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R++V + A++I IPVGI +G P I + P +L P + PL+V Sbjct: 85 SLARMLVALFFAALIGIPVGIAMGLSPAIRGLLDPLIELYRPVPPLAYLPLMVIWFGIGE 144 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG A + T W+ R++ILPG P Sbjct: 145 TS-KILLIYLAIFAP---VTLSTLAGVKNAQQVRIRAAQALGATRWQLLRWVILPGALPE 200 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T GLG + + E + V+ G+L++ Sbjct: 201 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGILVIALI 254 Query: 566 VLALN 570 +L Sbjct: 255 AFSLE 259 Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust. Identities = 32/153 (20%), Positives = 70/153 (45%), Gaps = 8/153 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + RML A+ + L S + +L P++++ + +P L +L V++ Sbjct: 80 QHLGASLARMLVALFFAALIGIPVGIAMGLSPAIRGLLDPLIELYRPVPPLAYLPLMVIW 139 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + +T S + N + +++ + WQ + Sbjct: 140 FG-------IG-ETSKILLIYLAIFAPVTLSTLAGVKNAQQVRIRAAQALGATRWQLLRW 191 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P ++P ++ + + + GW +VA+E+I Sbjct: 192 VILPGALPEILTGLRIGLGVGWSTLVAAELIAA 224 >gi|218437639|ref|YP_002375968.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218170367|gb|ACK69100.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 279 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 14/211 (6%) Query: 363 SIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 ++ YI+N F + L + WL ++ RV++ +++++ IPVG IG S + P Sbjct: 62 NLDYIINPFFVRGPGNLGIGWLLISSLRRVLIGFSLSALVAIPVGFLIGMSKPAMSALNP 121 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDF 479 Q+L + P +S + +P+ ++ +IF T W + N G ++ +D+ Sbjct: 122 VIQILKPVSPLAWLP--ISLAIFNQADPS---AIFVIFITSLWPTIINTALGVASVNSDY 176 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 +VA + W+ IILP PY TG + G AW + E+ + G G+ Sbjct: 177 LDVAKVLEMPRWKQIFKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------LGI 230 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G +I + + + V L VL++ L L+ Sbjct: 231 GFFIWDEWNRLNLNSVFLAVLVIGLTGLLLD 261 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L +S L L S+ L P++ I++ + L +L ++ F Sbjct: 90 RVLIGFSLSALVAIPVGFLIGMSKPAMSALNPVIQILKPVSPLAWLPISLAIFNQ----- 144 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A+ +AIF IF + +W + + ++ D +V++ + W++ + + +P S+P Sbjct: 145 ---ADPSAIFVIFITSLWPTIINTALGVASVNSDYLDVAKVLEMPRWKQIFKIILPASLP 201 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216 + + +S+ W +VA EM+ G Sbjct: 202 YIFTGLRISLGIAWLVIVAVEMLTGG 227 >gi|222106861|ref|YP_002547652.1| nitrate ABC transporter permease protein [Agrobacterium vitis S4] gi|221738040|gb|ACM38936.1| nitrate ABC transporter permease protein [Agrobacterium vitis S4] Length = 297 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI I++++P L +L ++ F N P +AIF IF + +W + + + Sbjct: 138 LDPIFQILRTVPPLAWLPLSLAAFQNSNP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP D V+R RL+ + F + VP + P + + + + W +VA+EM+ G Sbjct: 190 NIPDDYRNVARVLRLNPLEFFIRIMVPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV-- 247 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259 GIG +I A L I+ A L +GV F+ D+L+ Sbjct: 248 ----GIGFFIWDAWNSSRLSDIIVA-LAYIGVTGFVLDKLV 283 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 6/147 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV + +A+I+ + +G +G + P Q+L P + PL S ++ Sbjct: 105 VSLERVAIGFGLAAIVGVFLGAVVGQSIWAMRGLDPIFQILRTVPPLAWLPL--SLAAFQ 162 Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + NP+ ++ +IF T W ++ N G P+D++ VA + ++ I++P Sbjct: 163 NSNPS---AIFVIFITSIWPVIINTAVGVRNIPDDYRNVARVLRLNPLEFFIRIMVPAAA 219 Query: 504 PYYVTGAITACGGAWNASIVSEVASWG 530 PY TG G +W A + +E+ + G Sbjct: 220 PYIFTGLRIGVGLSWLAIVAAEMLTGG 246 >gi|307944732|ref|ZP_07660070.1| binding-protein-dependent transport systems inner membrane component [Roseibium sp. TrichSKD4] gi|307771946|gb|EFO31169.1| binding-protein-dependent transport systems inner membrane component [Roseibium sp. TrichSKD4] Length = 360 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 16/189 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +IA+II +P+GI G + I P Q+ + P+V VS + NP WLS Sbjct: 165 LIATIIAVPLGIASGLSRTFNGAINPLIQIFKPVSPLAWLPIVTMIVSATYANPYDWLSK 224 Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 ++ + W L N G ++ D V + W+ ++LP P Sbjct: 225 SLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLVLPSSLPLIF 284 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S ++++ VL + Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGI 338 Query: 565 FVLALNRFL 573 L+R + Sbjct: 339 IGFMLDRLM 347 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL V R +L W+ L +P S+P + + +S+ GW Sbjct: 238 MWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMV 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + Q L I+ A+LT+ + F+ D+L+F Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMVAVLTIGIIGFMLDRLMF 348 >gi|159028058|emb|CAO88018.1| nrtB [Microcystis aeruginosa PCC 7806] Length = 277 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+I+ I GI IG I I P Q+L P + P +S ++ + Sbjct: 87 SLQRVAVGFTLAAIVGIAAGILIGSSALIYDAIDPIFQILRTVPPLAWLP--ISLAAFRN 144 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ ++ +IF T W I+ N G P D+K V+ ++ ++ I+ P P Sbjct: 145 NEPS---AIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEYFFNILFPATVP 201 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E++L ++ + Sbjct: 202 YVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSMISEIILALIYVGI 255 Query: 565 FVLALNRFL 573 L+R + Sbjct: 256 VGFLLDRLM 264 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI I++++P L +L ++ F N P +AIF IF + +W + + + + Sbjct: 121 PIFQILRTVPPLAWLPISLAAFRNNEP--------SAIFVIFITAIWPIIINTAVGVQQV 172 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D + VSR +LS + F+ + P ++P + + + + W +VA+EM++ G Sbjct: 173 PQDYKNVSRVLKLSKVEYFFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV---- 228 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V FL D+L+ Sbjct: 229 --GIGFFIWDAWNSSMISEIILALIYVGIVGFLLDRLM 264 >gi|146284405|ref|YP_001174558.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri A1501] gi|145572610|gb|ABP81716.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri A1501] Length = 263 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV V ++A + + +G+ IG + P Q+L P + PL S Sbjct: 67 WQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPL--SL 124 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + +P+ +L +IF T W I+ N G P D++ VA + G+ +++ I+L Sbjct: 125 AGFQDSHPS---ALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEYFKTIML 181 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A I +E+ G G+G +I ++ +++L + Sbjct: 182 PAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG------VGIGFFIWDAWNASRISDIILAL 235 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 236 VYIGVVGFVLDRLV 249 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + +P +A+F IF + +W + + + Sbjct: 104 LDPIFQVLRTVPPLAWLPLSLAGFQDSHP--------SALFVIFITAIWPIIINTAVGIR 155 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V++ +L+G++ F + +P + P + + + + W ++A+EM++ G Sbjct: 156 NIPQDYRNVAQVLQLNGFEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG--- 212 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V F+ D+L+ Sbjct: 213 ---VGIGFFIWDAWNASRISDIILALVYIGVVGFVLDRLV 249 >gi|90577437|ref|ZP_01233248.1| putative nitrate transporter [Vibrio angustum S14] gi|90440523|gb|EAS65703.1| putative nitrate transporter [Vibrio angustum S14] Length = 324 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 16/189 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWL 452 I+AS+I IP+G+ +G + P QLL + PLV V SY +P + Sbjct: 126 ILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASYVTKDPLVAK 185 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L + + W L N G + D V+ ++ W+ R I+LP P Sbjct: 186 SFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIVLPSAIPMIF 245 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G AW I +E+ + + GLG ++ + + G S +++ V+++ Sbjct: 246 TGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSAASLSRIMVAVVMIGF 299 Query: 565 FVLALNRFL 573 L L+R + Sbjct: 300 IGLMLDRLM 308 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 9/140 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWN 149 + +L M PI+ +++ + L +L + Y K V + L ++ + +W Sbjct: 142 NHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASYVTKDPLVAKSFLNSMLTVTLCSLWP 201 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + N+ +DL VSR RLS WQ + +P ++P + + +S+ W ++A Sbjct: 202 TLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIVLPSAIPMIFTGLRLSIGIAWMVLIA 261 Query: 210 SEMIVVGDTVIPLPGIGSYI 229 +EM+ PG+G ++ Sbjct: 262 AEMLAQN------PGLGKFV 275 >gi|17228105|ref|NP_484653.1| nitrate transport permease protein [Nostoc sp. PCC 7120] gi|17129955|dbj|BAB72567.1| nitrate transport permease protein [Nostoc sp. PCC 7120] Length = 279 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 17/161 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI +++++P L +L ++ F P +AIF IF + +W + + + I Sbjct: 121 PIFQVLRTVPPLAWLPISLAAFQQANP--------SAIFVIFITSIWPILLNTTVGVQQI 172 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V++ RL G + F+ + P ++P + + + + W +VA+EM+V G Sbjct: 173 PQDYINVAKVLRLKGVKYFFKIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV---- 228 Query: 222 LPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIGS+I A E +L I+ A++ + V L D+L+ Sbjct: 229 --GIGSFIWDAYNTTTETNLSEIILALIYVGLVGLLLDRLV 267 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%) Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVI 469 P + + + P Q+L P + P +S ++ NP+ ++ +IF T W IL N Sbjct: 112 NPLVYNAVDPIFQVLRTVPPLAWLP--ISLAAFQQANPS---AIFVIFITSIWPILLNTT 166 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G P D+ VA + G +++ I+ P PY TG G +W A + +E+ Sbjct: 167 VGVQQIPQDYINVAKVLRLKGVKYFFKIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVG 226 Query: 530 GHIHLRTTGLGAYIAE---STEKGSFPEVVLGVLIMCCFVLALNRFL 573 G G+G++I + +T + + E++L ++ + L L+R + Sbjct: 227 G------VGIGSFIWDAYNTTTETNLSEIILALIYVGLVGLLLDRLV 267 >gi|329912974|ref|ZP_08275856.1| binding-protein-dependent transport systems inner membrane component [Oxalobacteraceae bacterium IMCC9480] gi|327545472|gb|EGF30676.1| binding-protein-dependent transport systems inner membrane component [Oxalobacteraceae bacterium IMCC9480] Length = 64 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 25/56 (44%), Positives = 35/56 (62%) Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 ++E +WG L GLG+YI + T+ G F + LG+ +MC FV+ LNRF W LY Sbjct: 1 MAEYVTWGKTTLIADGLGSYIKQMTDAGDFHRIALGIGVMCVFVMLLNRFFWRKLY 56 >gi|190895012|ref|YP_001985305.1| nitrate ABC transporter permease [Rhizobium etli CIAT 652] gi|190700673|gb|ACE94755.1| nitrate ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|327194336|gb|EGE61196.1| nitrate ABC transporter permease [Rhizobium etli CNPAF512] Length = 297 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ + FW + +P + P + + + + W +VA+EM+ G Sbjct: 190 NIPQDYRNVAEVLRLNQLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV-- 247 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A+ + V F D+L+ Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 13/205 (6%) Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 ++ QD+ + W +++ RV +A++ + VG IG + P Q+L P Sbjct: 91 NYGSQDI-GLGWRVLVSLQRVAYGFGLAAVAGVIVGAIIGQSVWAMRGLDPIFQVLRTVP 149 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHI 488 + PL S ++ NP+ ++ +IF T W ++ N G P D++ VA + Sbjct: 150 PLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRL 204 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 ++ I+LP PY TG G +W A + +E+ + G G+G +I ++ Sbjct: 205 NQLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFFIWDAWN 258 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 P++++ + + AL++ + Sbjct: 259 SSRLPDIIVALAYIGIVGFALDKLV 283 >gi|75910738|ref|YP_325034.1| nitrate transport permease [Anabaena variabilis ATCC 29413] gi|75704463|gb|ABA24139.1| Nitrate transport permease [Anabaena variabilis ATCC 29413] Length = 279 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 17/161 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI +++++P L +L ++ F P +AIF IF + +W + + + I Sbjct: 121 PIFQVLRTVPPLAWLPISLAAFQQANP--------SAIFVIFITSIWPILINTTVGVQQI 172 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V++ RL G + F+ + P ++P + + + + W +VA+EM+V G Sbjct: 173 PQDYINVAKVLRLKGVKYFFKIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV---- 228 Query: 222 LPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIGS+I A E +L I+ A++ + V L D+L+ Sbjct: 229 --GIGSFIWDAYNTTTETNLSEIILALIYVGLVGLLLDRLV 267 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%) Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVI 469 P + + + P Q+L P + P +S ++ NP+ ++ +IF T W IL N Sbjct: 112 NPLVYNAVDPIFQVLRTVPPLAWLP--ISLAAFQQANPS---AIFVIFITSIWPILINTT 166 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G P D+ VA + G +++ I+ P PY TG G +W A + +E+ Sbjct: 167 VGVQQIPQDYINVAKVLRLKGVKYFFKIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVG 226 Query: 530 GHIHLRTTGLGAYIAE---STEKGSFPEVVLGVLIMCCFVLALNRFL 573 G G+G++I + +T + + E++L ++ + L L+R + Sbjct: 227 G------VGIGSFIWDAYNTTTETNLSEIILALIYVGLVGLLLDRLV 267 >gi|37521656|ref|NP_925033.1| bicarbonate transport system permease protein [Gloeobacter violaceus PCC 7421] gi|35212654|dbj|BAC90028.1| cmpB [Gloeobacter violaceus PCC 7421] Length = 278 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+ + I VGI IG I S + P Q+L P + P +S Sbjct: 84 WQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLP--ISL 141 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + P ++ +IF T W I+ N G P D+ VA ++ +++ ++L Sbjct: 142 AAIQQSEPA---AIFVIFITAIWPIIINTAVGVQQIPQDYNNVARVLQLSRPKYFFKVLL 198 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ E+VL + Sbjct: 199 PAALPYIFTGLKIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAYNSAKVSEIVLAL 252 Query: 560 LIMCCFVLALNRFL 573 + + L L++ + Sbjct: 253 VYVGLVGLLLDKLV 266 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ ++++IP L +L ++ +E AAIF IF + +W + + + Sbjct: 121 LDPLFQVLRTIPPLAWLPISLAAIQQ--------SEPAAIFVIFITAIWPIIINTAVGVQ 172 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP+D V+R +LS + F+ + +P ++P + + + + W +VA+EM++ G Sbjct: 173 QIPQDYNNVARVLQLSRPKYFFKVLLPAALPYIFTGLKIGVGLSWLAIVAAEMLIGGV-- 230 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V L D+L+ Sbjct: 231 ----GIGFFIWDAYNSAKVSEIVLALVYVGLVGLLLDKLV 266 >gi|327482790|gb|AEA86100.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri DSM 4166] Length = 289 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV V ++A + + +G+ IG + P Q+L P + PL S Sbjct: 93 WQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPL--SL 150 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + +P+ +L +IF T W I+ N G P D++ VA + G+ +++ I+L Sbjct: 151 AGFQDSHPS---ALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEYFKTIML 207 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A I +E+ G G+G +I ++ +++L + Sbjct: 208 PAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG------VGIGFFIWDAWNASRISDIILAL 261 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 262 VYIGVVGFVLDRLV 275 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + +P +A+F IF + +W + + + Sbjct: 130 LDPIFQVLRTVPPLAWLPLSLAGFQDSHP--------SALFVIFITAIWPIIINTAVGIR 181 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V++ +L+G++ F + +P + P + + + + W ++A+EM++ G Sbjct: 182 NIPQDYRNVAQVLQLNGFEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG--- 238 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V F+ D+L+ Sbjct: 239 ---VGIGFFIWDAWNASRISDIILALVYIGVVGFVLDRLV 275 >gi|89072206|ref|ZP_01158785.1| putative nitrate transporter [Photobacterium sp. SKA34] gi|89051738|gb|EAR57190.1| putative nitrate transporter [Photobacterium sp. SKA34] Length = 324 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 16/189 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWL 452 I+AS+I IP+G+ +G + P QLL + PLV V SY +P + Sbjct: 126 ILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASYVTKDPLVAK 185 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L + + W L N G + D V+ ++ W+ R I+LP P Sbjct: 186 SFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIVLPSAIPMIF 245 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G AW I +E+ + + GLG ++ + + G S +++ V+++ Sbjct: 246 TGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSASSLSRIMVAVVMIGF 299 Query: 565 FVLALNRFL 573 L L+R + Sbjct: 300 IGLMLDRLM 308 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 9/140 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWN 149 + +L M PI+ +++ + L +L + Y K V + L ++ + +W Sbjct: 142 NHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASYVTKDPLVAKSFLNSMLTVTLCSLWP 201 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + N+ +DL VSR RLS WQ + +P ++P + + +S+ W ++A Sbjct: 202 TLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIVLPSAIPMIFTGLRLSIGIAWMVLIA 261 Query: 210 SEMIVVGDTVIPLPGIGSYI 229 +EM+ PG+G ++ Sbjct: 262 AEMLAQN------PGLGKFV 275 >gi|154246444|ref|YP_001417402.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160529|gb|ABS67745.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 298 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L + F + P +AIF IF + +W + + + Sbjct: 139 LDPIFQVLRTVPPLAWLPIALAAFRDSNP--------SAIFVIFITAIWPVIINTAVGIR 190 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ + FW + +P + P + + + + W +VA+EM+ G Sbjct: 191 NIPQDYRNVALVLRLNPVEFFWKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 248 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A++ + V F+ D+L+ Sbjct: 249 ----GIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLDRLV 284 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W +++ RV V +A+++ I VG IG + P Q+L P + P+ ++ Sbjct: 102 WRVLVSLQRVAVGFGLAAVVGILVGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPIALA- 160 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ NP+ ++ +IF T W ++ N G P D++ VA + ++ I+L Sbjct: 161 -AFRDSNPS---AIFVIFITAIWPVIINTAVGIRNIPQDYRNVALVLRLNPVEFFWKIML 216 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ + G G+G +I ++ P++++ + Sbjct: 217 PSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLPDIIVAL 270 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 271 VYIGVVGFVLDRLV 284 >gi|87300722|ref|ZP_01083564.1| ABC-type nitrate/nitrite transport system permease protein [Synechococcus sp. WH 5701] gi|87284593|gb|EAQ76545.1| ABC-type nitrate/nitrite transport system permease protein [Synechococcus sp. WH 5701] Length = 276 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 15/197 (7%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W I++ RV + ++ ++ I +G +G I P Q+L P +FP ++ Sbjct: 80 WQILISLQRVAIGYSLSGVVGIAIGGLLGLNRFIGKGFDPVIQVLRTVPPLAWFP--IAL 137 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + N + ++ +IF T W ++ N G P D+ VA + + R I++ Sbjct: 138 MVFQDANTS---AVFVIFITSIWPVIINTAVGIRQIPQDYTNVARVLRLRKRSYIREIVI 194 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVV 556 P PY TG A G AW A + +E+ G+G +I ++ G S +++ Sbjct: 195 PATVPYVFTGLRIAVGLAWLAIVAAEMLK------ADGGIGYFIWDAYNAGGDTSASQII 248 Query: 557 LGVLIMCCFVLALNRFL 573 L ++ + LAL+R + Sbjct: 249 LAIVYVGIVGLALDRLV 265 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/121 (21%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +R +G P++ +++++P L + ++ F + A +A+F IF + +W + Sbjct: 110 NRFIGKGFDPVIQVLRTVPPLAWFPIALMVFQD--------ANTSAVFVIFITSIWPVII 161 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + IP+D V+R RL + +P ++P + + +++ W +VA+EM Sbjct: 162 NTAVGIRQIPQDYTNVARVLRLRKRSYIREIVIPATVPYVFTGLRIAVGLAWLAIVAAEM 221 Query: 213 I 213 + Sbjct: 222 L 222 >gi|283781845|ref|YP_003372600.1| nitrate ABC transporter, inner membrane subunit [Pirellula staleyi DSM 6068] gi|283440298|gb|ADB18740.1| nitrate ABC transporter, inner membrane subunit [Pirellula staleyi DSM 6068] Length = 279 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ ++ + L +L +V F GK +E AAIF I +W + Q + I Sbjct: 126 PVIQFLRPVSPLAWLPLGLVLF-----GK---SEPAAIFTIALCSMWPTVINTAQGVRAI 177 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V+R RLS W W + +P ++P + +S+ W +VA+EM+ Sbjct: 178 PQDYLNVARVLRLSSWTMLWKIMLPAALPYMFTGFRLSLGIAWLVIVAAEMLT------G 231 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +PG+G ++ IL +LT+ V D+L+ Sbjct: 232 VPGVGGFLWQEYNSLIYEHILLCILTIGAVGLALDRLM 269 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 13/200 (6%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 Q +L W + + + +L I+ P+G +G P ++ P Q L + Sbjct: 83 QGILRFTWYSLVLVAKGYLLAIVLGA---PLGFALGSSPLLTRMFDPVIQFLRPVSPLAW 139 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL V + P ++ + + W + N G A P D+ VA ++ W Sbjct: 140 LPL--GLVLFGKSEPAAIFTIALC--SMWPTVINTAQGVRAIPQDYLNVARVLRLSSWTM 195 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 I+LP PY TG + G AW + +E+ + G+G ++ + + Sbjct: 196 LWKIMLPAALPYMFTGFRLSLGIAWLVIVAAEMLT------GVPGVGGFLWQEYNSLIYE 249 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++L +L + LAL+R + Sbjct: 250 HILLCILTIGAVGLALDRLM 269 >gi|188584197|ref|YP_001927642.1| nitrate ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179347695|gb|ACB83107.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium populi BJ001] Length = 286 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 95/196 (48%), Gaps = 14/196 (7%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + S + R+ ++++ + TL +S L PI ++++IP L +L ++ F Sbjct: 91 HISASLQRVALGFALAVVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSLAAF 150 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + P +AIF IF + +W + + + NIP+D V+ RL+ + F+ + Sbjct: 151 RDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFYKI 202 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P + P + + + + W +VA+EM++ G GIG +I A + I+ Sbjct: 203 MLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEIIV 256 Query: 244 AMLTMLGVIFLYDQLL 259 A++ + + F+ D+L+ Sbjct: 257 ALVYVGLIGFVLDRLV 272 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A + + +G +G + P Q+L P + PL S Sbjct: 90 WHISASLQRVALGFALAVVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPL--SL 147 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ P+ ++ +IF T W I+ N G P D++ VA+ + ++ I+L Sbjct: 148 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFYKIML 204 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ E+++ + Sbjct: 205 PSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVAL 258 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 259 VYVGLIGFVLDRLV 272 >gi|16330083|ref|NP_440811.1| nitrate transport protein NrtB [Synechocystis sp. PCC 6803] gi|2501376|sp|P73451|NRTB_SYNY3 RecName: Full=Nitrate transport permease protein nrtB gi|1652570|dbj|BAA17491.1| nitrate transport protein; NrtB [Synechocystis sp. PCC 6803] Length = 275 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V A+++ I +GI IG + + P Q+L P + P+ ++ + Sbjct: 85 SLTRVAVGFSAAAVVGIALGILIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAALQ--E 142 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ ++ +IF T W I+ N GA P D++ V+ ++ +++ I+ P P Sbjct: 143 AEPS---AIFVIFITAIWPIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPAAVP 199 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E+++ ++ + Sbjct: 200 YIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAYNSSLISEIIIALIYVGI 253 Query: 565 FVLALNRFL 573 L L+RF+ Sbjct: 254 VGLLLDRFI 262 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 8/128 (6%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L S+ + L PI ++++IP L +L + AE +AIF IF + +W Sbjct: 106 LIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAALQE--------AEPSAIFVIFITAIW 157 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + +P+D VSR +LS Q F+ + P ++P + + + + W +V Sbjct: 158 PIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPAAVPYIFTGLRIGIGLSWLAIV 217 Query: 209 ASEMIVVG 216 A+EM++ G Sbjct: 218 AAEMLIGG 225 >gi|319782349|ref|YP_004141825.1| nitrate ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168237|gb|ADV11775.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 296 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ I++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 137 LDPVFQILRTVPPLAWLPLSLAAFRDSSP--------SAIFVIFITSIWPIIINTAVGVR 188 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP D VSR RL+ ++ F + VP + P + + + + W +VA+EM+ G Sbjct: 189 NIPEDYRNVSRILRLNQFEFFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 246 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259 GIG +I A L I+ A L +GV F D+L+ Sbjct: 247 ----GIGFFIWDAWNSSRLPDIIVA-LAYIGVTGFCLDRLV 282 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 13/201 (6%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 QD+ + W I++ RV V +A+++ + +G +G + P Q+L P + Sbjct: 94 QDI-GLAWRVLISLQRVAVGFGLAAVVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAW 152 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492 PL S ++ +P+ ++ +IF T W I+ N G P D++ V+ + + Sbjct: 153 LPL--SLAAFRDSSPS---AIFVIFITSIWPIIINTAVGVRNIPEDYRNVSRILRLNQFE 207 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++ I++P PY TG G +W A + +E+ + G G+G +I ++ Sbjct: 208 FFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRL 261 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 P++++ + + L+R + Sbjct: 262 PDIIVALAYIGVTGFCLDRLV 282 >gi|159185941|ref|NP_356730.2| ABC transporter, membrane spanning protein (nitrate) [Agrobacterium tumefaciens str. C58] gi|159141075|gb|AAK89515.2| ABC transporter, membrane spanning protein (nitrate) [Agrobacterium tumefaciens str. C58] Length = 297 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V++ RL+ + F+ + +P + P + + + + W +VA+EM+ G Sbjct: 190 NIPQDYRNVAKVLRLNQLEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 247 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A+ + V F+ D+L+ Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVALAYIGVVGFMLDKLV 283 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 13/205 (6%) Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 H QD+ + + +++ RV +A+I I +G IG + P Q+L P Sbjct: 91 HNGSQDIGLGLRV-LVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVP 149 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHI 488 + PL S ++ NP+ ++ +IF T W ++ N G P D++ VA + Sbjct: 150 PLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRL 204 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 ++ I+LP PY TG G +W A + +E+ + G G+G +I ++ Sbjct: 205 NQLEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWN 258 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 P++++ + + L++ + Sbjct: 259 SSRLPDIIVALAYIGVVGFMLDKLV 283 >gi|317406801|gb|EFV86921.1| binding-protein-dependent transport system inner membrane component [Achromobacter xylosoxidans C54] Length = 205 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 10/186 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV V + +A I +P+G+ IG + + + P Q L + P+ V Sbjct: 18 VSLRRVAVGLGLALAIGVPLGLAIGSYRRLEAALSPAMQFLRMISPLSWMPIAVMVFGVG 77 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +P + L+ F W I N AG + ++A S T W R++ILPG+ Sbjct: 78 D-DP---VYFLLAFAAVWPIALNTAAGVQQLDARWLQLAQSMAATRWETLRHVILPGVLG 133 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + +TG A G W + E+ + G+G +I ++ ++ ++ E++ VL++ Sbjct: 134 HILTGVRLAIGILWIVLVPCEMLG------VSAGMGYFILDTRDRLAYSELMAMVLLIGA 187 Query: 565 FVLALN 570 AL+ Sbjct: 188 LGFALD 193 >gi|226940110|ref|YP_002795183.1| binding-protein-dependent transport systems inner membrane component [Laribacter hongkongensis HLHK9] gi|226715036|gb|ACO74174.1| binding-protein-dependent transport systems inner membrane component [Laribacter hongkongensis HLHK9] Length = 272 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 24/192 (12%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M+RVVV ++ + + +P+G+ +G P + + P Q+L P + PL + Sbjct: 79 SMYRVVVGFLVGAGLALPLGLVMGANPRLYALFNPLLQVLRPIPPIAYIPLAI------- 131 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW L L+ G + +L N IAG + + A + + W + +I Sbjct: 132 ----LWFGLGNPPSFFLISIGAFFPVLMNTIAGVNHVDGIYLRAARNLGVGSWTMFTRVI 187 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY + G G A+ IVSE+ + GLG I E+ E +++ G Sbjct: 188 LPAATPYILAGVRIGIGTAFIVVIVSEMIA------VNDGLGFRILEAREFMWSDKIIAG 241 Query: 559 VLIMCCFVLALN 570 +L + LA++ Sbjct: 242 MLTIGLLGLAID 253 >gi|110833713|ref|YP_692572.1| nitrate ABC transporter permease [Alcanivorax borkumensis SK2] gi|110646824|emb|CAL16300.1| nitrate ABC transporter permease protein [Alcanivorax borkumensis SK2] Length = 333 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 15/198 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++AS+I IP+GI IG + + P QL + PLV VS Y +P + Sbjct: 135 LLASLIAIPLGIVIGLSSTAYAAMNPLIQLFKPVSPLAWLPLVTMVVSALYVTDDPMVAK 194 Query: 453 SLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L T W L N G ++ D V+ + R I+LP P Sbjct: 195 SFLTSMFTVSLCCLWPTLMNTSVGVTSVSQDLTNVSLVLRLNALSHIRKIVLPSALPMMF 254 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G AW I +E+ + + GLG ++ + + GS LG +++ V+ Sbjct: 255 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LGRIMVAVIVI 306 Query: 568 ALNRFLWHPLYLYGTRCL 585 L FL L L R L Sbjct: 307 GLIGFLLDRLMLMLQRAL 324 >gi|46200802|ref|ZP_00056318.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 277 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F A+ +AIF IF + VW + + + Sbjct: 123 LDPIFQVLRTVPPLAWLPISLAAFRQ--------ADPSAIFVIFITSVWPIILNTAVGVR 174 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RLS + F+ + +P ++P + + + + W +VA+EM++ G Sbjct: 175 NIPQDYRNVAAVLRLSPLEFFFKIVIPATVPYIFTGLKIGIGLSWLAIVAAEMLIGGV-- 232 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V F+ D+++ Sbjct: 233 ----GIGFFIWDAWNSSLMSEIILALIYVGLVGFMLDRMI 268 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V ++++ + +G+ IG + P Q+L P + P +S ++ Sbjct: 91 SLKRVAVGFSLSAVAGVFLGVLIGQSTMAYRALDPIFQVLRTVPPLAWLP--ISLAAFRQ 148 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +P+ ++ +IF T W I+ N G P D++ VA+ ++ ++ I++P P Sbjct: 149 ADPS---AIFVIFITSVWPIILNTAVGVRNIPQDYRNVAAVLRLSPLEFFFKIVIPATVP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E++L ++ + Sbjct: 206 YIFTGLKIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLMSEIILALIYVGL 259 Query: 565 FVLALNRFL 573 L+R + Sbjct: 260 VGFMLDRMI 268 >gi|149928370|ref|ZP_01916610.1| nitrate transport permease [Limnobacter sp. MED105] gi|149822905|gb|EDM82151.1| nitrate transport permease [Limnobacter sp. MED105] Length = 288 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 8/117 (6%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 129 LDPLFQVLRTVPPLAWLPLSLAGFQDGNP--------SAIFVIFITAIWPIIINTSVGIR 180 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 NIP D VSR + +G + FW + +P + P + + + + W +VA+EM++ G Sbjct: 181 NIPEDYRNVSRVIQHNGIEYFWKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLIGG 237 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 12/155 (7%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476 + P Q+L P + PL S + NP+ ++ +IF T W I+ N G P Sbjct: 129 LDPLFQVLRTVPPLAWLPL--SLAGFQDGNPS---AIFVIFITAIWPIIINTSVGIRNIP 183 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D++ V+ G ++ I+LP PY +G G +W A + +E+ G Sbjct: 184 EDYRNVSRVIQHNGIEYFWKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLIGG------ 237 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 G+G +I ++ ++VL ++ + L+R Sbjct: 238 VGIGFFIWDAWNSSLISDIVLALVYVGIVGFILDR 272 >gi|144898341|emb|CAM75205.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Magnetospirillum gryphiswaldense MSR-1] Length = 172 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 14/169 (8%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 +S+ L PI +++++P L +L ++ F A+ +AIF IF + VW + Sbjct: 9 GQSKLAMRALDPIFQVLRTVPPLAWLPISLAAFK--------AADPSAIFVIFITSVWPI 60 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + NIP+D V+ RLS + F + +P S+P + + + + W +VA+ Sbjct: 61 ILNTAVGVRNIPQDYRNVAAVLRLSPLEFFAKIAMPASVPYIFTGLKIGIGLSWLAIVAA 120 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 EM++ G GIG +I A + I+ A++ + V F D+L+ Sbjct: 121 EMLIGGV------GIGFFIWDAWNSSLMSEIILALVYVGLVGFALDRLI 163 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 12/157 (7%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476 + P Q+L P + P +S ++ +P+ ++ +IF T W I+ N G P Sbjct: 18 LDPIFQVLRTVPPLAWLP--ISLAAFKAADPS---AIFVIFITSVWPIILNTAVGVRNIP 72 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D++ VA+ ++ ++ I +P PY TG G +W A + +E+ G Sbjct: 73 QDYRNVAAVLRLSPLEFFAKIAMPASVPYIFTGLKIGIGLSWLAIVAAEMLIGG------ 126 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ E++L ++ + AL+R + Sbjct: 127 VGIGFFIWDAWNSSLMSEIILALVYVGLVGFALDRLI 163 >gi|307823608|ref|ZP_07653837.1| binding-protein-dependent transport systems inner membrane component [Methylobacter tundripaludum SV96] gi|307735593|gb|EFO06441.1| binding-protein-dependent transport systems inner membrane component [Methylobacter tundripaludum SV96] Length = 338 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 22/206 (10%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 TY D ++ +++ V +IA++I +P+G++ G P +S I P Q+ Sbjct: 125 TYLDKIFT------SLYTVFAGFVIATLIAVPLGLFCGMSPIFNSAINPLVQIFKPVSPL 178 Query: 432 VFFPLVVSCVSYYHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 + P+V VS ++ + L ++ + + W L N G S+ D V Sbjct: 179 AWLPIVTLVVSAVYVTTDDSWFEKSFLTSAITVTLCSLWPTLINTAVGVSSIDKDLINVG 238 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++ + IILP PY TG + G W I +E+ + + GLG ++ Sbjct: 239 KVLRLSWSTQIKKIILPSALPYIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFV 292 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLAL 569 + + GS LG +++ F + L Sbjct: 293 WDEFQNGSSNS--LGRIMVAVFTIGL 316 >gi|305662629|ref|YP_003858917.1| ABC-type anion transport system duplicated permease component [Ignisphaera aggregans DSM 17230] gi|304377198|gb|ADM27037.1| ABC-type anion transport system duplicated permease component [Ignisphaera aggregans DSM 17230] Length = 263 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 3/110 (2%) Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNV-IAGASAFPND 478 +++L++ A +++P + S ++ P L +SL ++F GT WYI+FNV ++ S Sbjct: 118 LSEILSSISAFLWWP-IFSLALLNNILPPLIVSLFIMFQGTAWYIVFNVPLSPPSESEKR 176 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 E+AS + ++G++ + I +P + P + G A GGAWN++I +E AS Sbjct: 177 LLEMASVYRLSGFKKFSKIFIPSMMPRILAGLSAAWGGAWNSTIAAEYAS 226 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 16/148 (10%) Query: 73 LSAMVISLLFTFVYATLAA-----KSRRLGMVLVPILDIMQSIPILGFL---TFTVVYFM 124 LS + I + +F +LAA KS+ +LV + +I+ SI FL F++ Sbjct: 83 LSRVTIVIFISFTVISLAAFYVYGKSKYAKYILVLLSEILSSIS--AFLWWPIFSLALLN 140 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL-CNIPRDLEEVSRSFRLSGWQKFWYL 183 N+ P ++ ++F +F W + F++ S + L E++ +RLSG++KF + Sbjct: 141 NILPPLIV-----SLFIMFQGTAWYIVFNVPLSPPSESEKRLLEMASVYRLSGFKKFSKI 195 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASE 211 +P MP ++ + + G W +A+E Sbjct: 196 FIPSMMPRILAGLSAAWGGAWNSTIAAE 223 >gi|332716622|ref|YP_004444088.1| nitrate transport permease protein nrtB [Agrobacterium sp. H13-3] gi|325063307|gb|ADY66997.1| nitrate transport permease protein nrtB [Agrobacterium sp. H13-3] Length = 297 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F + P +AIF IF + +W + + + Sbjct: 138 LDPIFQVLRTVPPLAWLPLSLAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVR 189 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V++ RL+ + F+ + +P + P + + + + W +VA+EM+ G Sbjct: 190 NIPQDYRNVAKVLRLNQIEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 247 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A+ + V F+ D+L+ Sbjct: 248 ----GIGFFIWDAWNSSRLPDIIVALAYIGVVGFMLDKLV 283 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%) Query: 370 HFTYQDVLYVIWLGC---ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 H QD I LG +++ RV +A+I I +G IG + P Q+L Sbjct: 91 HNGSQD----IGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSIWAMRGLDPIFQVLR 146 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASS 485 P + PL S ++ NP+ ++ +IF T W ++ N G P D++ VA Sbjct: 147 TVPPLAWLPL--SLAAFQDSNPS---AIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKV 201 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + ++ I+LP PY TG G +W A + +E+ + G G+G +I + Sbjct: 202 LRLNQIEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWD 255 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + P++++ + + L++ + Sbjct: 256 AWNSSRLPDIIVALAYIGVVGFMLDKLV 283 >gi|218248421|ref|YP_002373792.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 8801] gi|257061488|ref|YP_003139376.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 8802] gi|218168899|gb|ACK67636.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8801] gi|256591654|gb|ACV02541.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8802] Length = 280 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 8/128 (6%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L SR +++ PI+ +++ + L +L + F NL AE +AIF IF + +W Sbjct: 107 LIGMSRTAMLMINPIIQVLKPVSPLAWLPIALAMF-NL-------AEPSAIFVIFITSLW 158 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + + ++PRD EVS+ ++ ++ W + +P S+P + + +S+ W +V Sbjct: 159 STIINTALGVASVPRDYLEVSQVLEMNHRRRIWKIILPASLPYIFTGLRISLGIAWLVIV 218 Query: 209 ASEMIVVG 216 A EM+ G Sbjct: 219 AVEMLTGG 226 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 WL ++ RV + ++ + + IPVG+ IG I P Q+L + P+ ++ Sbjct: 81 WLLLASLRRVSIGFLLGAAVAIPVGLLIGMSRTAMLMINPIIQVLKPVSPLAWLPIALAM 140 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + ++ +IF T W + N G ++ P D+ EV+ + R IIL Sbjct: 141 FNLAEPS-----AIFVIFITSLWSTIINTALGVASVPRDYLEVSQVLEMNHRRRIWKIIL 195 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG + G AW + E+ + G G+G ++ + + + V L V Sbjct: 196 PASLPYIFTGLRISLGIAWLVIVAVEMLTGG------IGIGFFVWDEWNRLNVSSVFLAV 249 Query: 560 LIMCCFVLALNRFL 573 L++ L L+ L Sbjct: 250 LVIGLTGLVLDYIL 263 >gi|319893575|ref|YP_004150450.1| ABC transporter permease protein [Staphylococcus pseudintermedius HKU10-03] gi|317163271|gb|ADV06814.1| ABC transporter permease protein [Staphylococcus pseudintermedius HKU10-03] Length = 254 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 10/187 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++R +V +IA ++ IP+GI +G + I+P Q + + P +V Sbjct: 62 ISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPFIVLWFGI- 120 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +L ++ + I+FN I G N + ++A + ++ GW +R II PG F Sbjct: 121 ---GSLPAIFIIFIAAFFPIVFNTIKGVRTIDNHYLKIADNLNLHGWSLYRDIIFPGAFK 177 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + ++G A G +W + E+ +GLG I +S + +V+ + + Sbjct: 178 HIMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVLSAIFFIGI 231 Query: 565 FVLALNR 571 F ++R Sbjct: 232 FGFLIDR 238 >gi|117617477|ref|YP_857899.1| nitrate transporter component [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117558884|gb|ABK35832.1| nitrate transporter component [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 314 Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 16/186 (8%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS-- 453 +A++I IP G+ +G + P QLL + P++ VS + +P WL+ Sbjct: 117 LATLIAIPCGVLLGMNQGLYRAANPVIQLLKPVSPLAWLPIITLVVSALYASPTPWLAKS 176 Query: 454 -----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L + + W L N G + D V+ ++ R I+LPG P T Sbjct: 177 FLTSALTVTLCSLWPTLINTAVGVAGLDRDLHNVSRVLRLSFVTHVRRIVLPGALPMIFT 236 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCF 565 G + G AW I +E+ + + GLG ++ + + G S +++ V+ + Sbjct: 237 GLRLSLGVAWMVLIAAEMLA------QNPGLGKFVWDEFQSGGSASLARIMVAVITIGLI 290 Query: 566 VLALNR 571 AL+R Sbjct: 291 GCALDR 296 >gi|83590814|ref|YP_430823.1| binding-protein dependent transport system inner membrane protein [Moorella thermoacetica ATCC 39073] gi|83573728|gb|ABC20280.1| Binding-protein-dependent transport systems inner membrane component [Moorella thermoacetica ATCC 39073] Length = 266 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 22/213 (10%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 GY++ H I++ RV + IA I +P+G+ + P +++ ++PF ++ Sbjct: 63 GYLLKHV------------LISLARVGLGFTIAVAIGVPLGLAMALVPLVNNLVEPFVRI 110 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL + ++ L + ++ G+ + +L N G E A Sbjct: 111 FGPIPGIAWVPL---AILWFGLGDKAAI-FIITMGSVFPVLINTYQGMKDVDQTLIEAAR 166 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + W+ +ILP + PY VTG G AW I +E+ GLG + Sbjct: 167 TMGAGPWQLLSRVILPSLIPYLVTGFRVGLGFAWRVVIAAEMVG------VPNGLGYMLG 220 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 G ++ ++++ +L + ++ PL Sbjct: 221 VGRGTGRTDITIITMVVLGAIMLVVEELIFAPL 253 Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 6/130 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + AAIF I V+ + + YQ + ++ + L E +R+ WQ + +P +P LV Sbjct: 130 GDKAAIFIITMGSVFPVLINTYQGMKDVDQTLIEAARTMGAGPWQLLSRVILPSLIPYLV 189 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + + W V+A+EM+ V + + + G+G D+ I M+ + ++ Sbjct: 190 TGFRVGLGFAWRVVIAAEMVGVPNGLGYMLGVGR----GTGRTDITII--TMVVLGAIML 243 Query: 254 LYDQLLFRPM 263 + ++L+F P+ Sbjct: 244 VVEELIFAPL 253 >gi|319949524|ref|ZP_08023574.1| ABC transporter integral membrane subunit [Dietzia cinnamea P4] gi|319436814|gb|EFV91884.1| ABC transporter integral membrane subunit [Dietzia cinnamea P4] Length = 231 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 39/187 (20%), Positives = 91/187 (48%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++++R+V + +A+++ +P+G+W+G R + P Q L + P+ ++ Sbjct: 42 AVSLYRLVAGLAVAALLGVPLGLWLGLRRRAEAVAGPLVQFLRMISPLSWAPVAIAVFGI 101 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P ++L + W I+ + +G A + +VA + +GW +++P + Sbjct: 102 GN-EPVIFL---VAAAAIWPIMLSTSSGVHAMDPGYLDVARTMGASGWERLTRVVIPAVR 157 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G AW + +E+ + +R +GLG I + ++ ++ +V+ +L++ Sbjct: 158 PAILGGIRLALGTAWIVLVPAEM-----LGVR-SGLGYQILNARDQLAYDQVMAVILVIG 211 Query: 564 CFVLALN 570 AL+ Sbjct: 212 VLGFALD 218 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 8/160 (5%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 LD L A+ + R+++ + ++ L RR V P++ ++ I L + Sbjct: 32 LDRGVLISDAAVSLYRLVAGLAVAALLGVPLGLWLGLRRRAEAVAGPLVQFLRMISPLSW 91 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + F IG E IF + + +W + S + + +V+R+ S Sbjct: 92 APVAIAVFG-------IGNE-PVIFLVAAAAIWPIMLSTSSGVHAMDPGYLDVARTMGAS 143 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 GW++ + +P P ++ + +++ W +V +EM+ V Sbjct: 144 GWERLTRVVIPAVRPAILGGIRLALGTAWIVLVPAEMLGV 183 >gi|294011624|ref|YP_003545084.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Sphingobium japonicum UT26S] gi|292674954|dbj|BAI96472.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Sphingobium japonicum UT26S] Length = 324 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%) Query: 369 NHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 HF+ QD V G + ++ RV++ IA++I + +GI IG + P Q+L Sbjct: 117 THFSIQDGGDVGIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQVLR 176 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASS 485 P + P +S + P+ ++ +IF T W I+ N AG P ++ VA Sbjct: 177 TVPPLAWLP--ISLAIFQQAQPS---AIFLIFITAIWPIILNTAAGVQTLPVAYRNVAKV 231 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + ++ I+LP P+ TG G +W A + +E+ G TG+G +I + Sbjct: 232 LALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGG------TGVGFFIWD 285 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 S + ++ ++ + AL+R + Sbjct: 286 SYNSSLLTDTIVALIWIGMVGFALDRIV 313 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 8/120 (6%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ +++++P L +L ++ F P +AIF IF + +W + + + Sbjct: 168 LDPLFQVLRTVPPLAWLPISLAIFQQAQP--------SAIFLIFITAIWPIILNTAAGVQ 219 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +P V++ L+ + F + +P ++P + + + + W +VA+EM+ G V Sbjct: 220 TLPVAYRNVAKVLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGGTGV 279 >gi|86608094|ref|YP_476856.1| nitrate ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556636|gb|ABD01593.1| nitrate ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 275 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 11/189 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + A+++ I +GI +G I+ + P Q L + PL +S Sbjct: 87 SLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFL-----RMVAPLAWVPISLAA 141 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L N +L +IF T W IL N G P D+ V+ ++ ++ ++LP P Sbjct: 142 LQRNEPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVLLPSALP 201 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A I +E+ G G+G +I ++ ++ E+++ V+ + Sbjct: 202 YMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVAVIYIGA 256 Query: 565 FVLALNRFL 573 L L+R + Sbjct: 257 VGLLLDRLM 265 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 9/135 (6%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AA+F IF + +W + + + IP D VS+ +LS F+ + +P ++P + Sbjct: 146 EPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVLLPSALPYMFT 205 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + + + W ++A+E+++ G +PGIG +I A ++ + I+ A++ + V L Sbjct: 206 GLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVAVIYIGAVGLL 260 Query: 255 YDQLLFRPMIVWSNK 269 D+L M V NK Sbjct: 261 LDRL----MSVLQNK 271 >gi|118591229|ref|ZP_01548628.1| binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] gi|118436305|gb|EAV42947.1| binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] Length = 360 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 16/189 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +IA++I +P+GI G + I P Q+ + P+V VS + +P WLS Sbjct: 165 LIATLIAVPLGIASGLSRSFNGAINPLIQIFKPVSPLAWLPIVTMIVSATYADPVDWLSK 224 Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 ++ + W L N G ++ D V + W+ ++LP P Sbjct: 225 SLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTVTKLVLPSSLPLIF 284 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S ++++ VL + Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGI 338 Query: 565 FVLALNRFL 573 L+R + Sbjct: 339 IGFMLDRLM 347 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 92/213 (43%), Gaps = 15/213 (7%) Query: 57 DVHSLPQYASR--TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 D P Y + T+L+ + +I+ L + SR + P++ I + + L Sbjct: 142 DYTGKPTYIDQIGTSLKTVGLGFLIATLIAVPLGIASGLSRSFNGAINPLIQIFKPVSPL 201 Query: 114 GFLTFTVVYFMNLYPGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170 +L + Y V + L + + +W + + ++ +DL V R Sbjct: 202 AWLPIVTMIVSATYADPVDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGR 261 Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230 +L W+ L +P S+P + + +S+ GW ++A+EM+ PG+G ++ Sbjct: 262 VLQLPTWKTVTKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLAQN------PGLGKFVW 315 Query: 231 LAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 + Q L I+ A+LT+ + F+ D+L+F Sbjct: 316 DEFQNGSSQSLAKIMVAVLTIGIIGFMLDRLMF 348 >gi|170741903|ref|YP_001770558.1| nitrate ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196177|gb|ACA18124.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 288 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 14/173 (8%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 TL +S L PI ++++IP L +L ++ F + P +AIF IF + Sbjct: 116 GTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITS 167 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + + NIP+D V+ RL+ ++ F + +P + P + + + + W Sbjct: 168 IWPIIINTAVGIRNIPQDYRNVASVLRLNAFEFFGKIMLPSAAPYIFTGLRIGVGLSWLA 227 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +VA+EM++ G GIG +I A + I+ A++ + + F+ D+++ Sbjct: 228 IVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGVIGFVLDRVV 274 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 12/187 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +AS+ + +G +G + P Q+L P + PL S ++ Sbjct: 97 SLQRVALGFALASVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPL--SLAAFRD 154 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ ++ +IF T W I+ N G P D++ VAS + + ++ I+LP P Sbjct: 155 GQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVASVLRLNAFEFFGKIMLPSAAP 211 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E+++ ++ + Sbjct: 212 YIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVALVYVGV 265 Query: 565 FVLALNR 571 L+R Sbjct: 266 IGFVLDR 272 >gi|27366831|ref|NP_762358.1| nitrate ABC transporter permease [Vibrio vulnificus CMCP6] gi|37676610|ref|NP_937006.1| nitrate transporter system, permease component [Vibrio vulnificus YJ016] gi|320158715|ref|YP_004191093.1| nitrate ABC transporter permease [Vibrio vulnificus MO6-24/O] gi|27358398|gb|AAO07348.1| Nitrate ABC transporter, permease protein [Vibrio vulnificus CMCP6] gi|37201153|dbj|BAC96976.1| nitrate transporter system, permease component [Vibrio vulnificus YJ016] gi|319934027|gb|ADV88890.1| nitrate ABC transporter permease protein [Vibrio vulnificus MO6-24/O] Length = 322 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 16/187 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++AS+I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 124 MLASLIAIPLGIILGLNQGLYMAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPLFAK 183 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ WR R I+LP P Sbjct: 184 SFVNSLFTVALCSLWPTLINTAVGVTSVDKDLLNVSKVLRLSWWRHIRIIVLPSAIPMMF 243 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G AW I +E+ + + GLG ++ + + G S +++ V+++ Sbjct: 244 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLGRIMVAVIVIGL 297 Query: 565 FVLALNR 571 L L+R Sbjct: 298 IGLLLDR 304 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/92 (21%), Positives = 46/92 (50%), Gaps = 6/92 (6%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 ++F + +W + + ++ +DL VS+ RLS W+ + +P ++P + + Sbjct: 188 SLFTVALCSLWPTLINTAVGVTSVDKDLLNVSKVLRLSWWRHIRIIVLPSAIPMMFTGLR 247 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 +S+ W ++A+EM+ PG+G ++ Sbjct: 248 LSLGIAWMVLIAAEMLAQN------PGLGKFV 273 >gi|158423902|ref|YP_001525194.1| ABC-type nitrate/sulfonate/bicarbonate transport permease [Azorhizobium caulinodans ORS 571] gi|158330791|dbj|BAF88276.1| ABC-type nitrate/sulfonate/bicarbonate transport permease [Azorhizobium caulinodans ORS 571] Length = 273 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 10/186 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+V + IA + +PVG+ +G + P Q L + P+ V Sbjct: 83 VSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAFQFLRMISPLSWMPIAVMVFGVG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L+ F T W IL AG + V+ S TGW +ILP I Sbjct: 143 DAP----IYFLLAFATVWPILLATAAGVRQIDPQWLLVSRSLAATGWETLSRVILPAILG 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + +TG A G AW + E+ + GLG +I ++ ++ ++PE++ +L++ Sbjct: 199 HVLTGVRLAIGIAWIVLVPCEMLGV------SAGLGYFILDTRDRLAYPELMATILVIGI 252 Query: 565 FVLALN 570 AL+ Sbjct: 253 IGFALD 258 >gi|307151917|ref|YP_003887301.1| binding-protein-dependent transporter inner membrane component [Cyanothece sp. PCC 7822] gi|306982145|gb|ADN14026.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7822] Length = 302 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 18/181 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV V +ASI+ IP+GI +G I + ++P L+ PA F PL++ + Sbjct: 110 SLWRVGVGFFLASILSIPLGILMGSYATIRALLEPIFGLMRYMPAPAFIPLLILYLGVGE 169 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + LL+ G ++ V+ P D E S++ + G RW I + IFP+ Sbjct: 170 -EPKI---LLIFIGVFFFNALMVMDTVKFVPKDLIE--STYMLGGNRWQTLIQV--IFPH 221 Query: 506 YVTGAITAC----GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 V G I AC AW IVSE+ + T GLG I+ + E+ +G+++ Sbjct: 222 VVPGIIDACRINLAAAWQLVIVSELIA------STEGLGRRISVAGRFLRTDEIFVGLIV 275 Query: 562 M 562 + Sbjct: 276 I 276 Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 28/179 (15%) Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 YAT+ A +L PI +M+ +P F+ ++Y +G E I IF Sbjct: 135 YATIRA-------LLEPIFGLMRYMPAPAFIPLLILYLG-------VGEE-PKILLIFIG 179 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + ++ +P+DL E + + WQ + P +PG++ ++++ W Sbjct: 180 VFFFNALMVMDTVKFVPKDLIESTYMLGGNRWQTLIQVIFPHVVPGIIDACRINLAAAWQ 239 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 V+ SE+I + G+G I++A ++ + ++ L ++GVI L+ LLF+ Sbjct: 240 LVIVSELIASTE------GLGRRISVAGRFLRTDE----IFVGLIVIGVIGLFFDLLFQ 288 >gi|288932110|ref|YP_003436170.1| binding-protein-dependent transporters inner membrane component [Ferroglobus placidus DSM 10642] gi|288894358|gb|ADC65895.1| binding-protein-dependent transport systems inner membrane component [Ferroglobus placidus DSM 10642] Length = 253 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 107/206 (51%), Gaps = 15/206 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+A+ + LR+L+ ++ + L SR + L P +++++ IP L ++ Sbjct: 47 KTLLQHAASSLLRVLAGATVAFSLSIPLGILMWFSRTYNL-LHPAIEVLRPIPPLAWIPL 105 Query: 119 TVVYFMNLYPGKVIGAEL--AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + F + +P + A++ A+ A F S V T S Y + IP++ E+++ F Sbjct: 106 SYILFAS-FPNPTVFAQIFIVAVGAFFPSFV---TISDY--VRGIPQEFIELAKVFGARN 159 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + + +P+S+PG++ + + + GW ++A+EMI + G+G +I + + Sbjct: 160 FDLLTKIVLPYSLPGIITGIRVGLGVGWMSIIAAEMIASSGS-----GLGYFILVMYEVG 214 Query: 237 DLLAILYAMLTMLGVI-FLYDQLLFR 261 + + A + M+G+I +L + LLF+ Sbjct: 215 GRMPEILAGMAMIGLIGYLMNTLLFK 240 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 11/193 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +A + IP+GI + F + + P ++L P + PL + + Sbjct: 56 SLLRVLAGATVAFSLSIPLGILMWFS-RTYNLLHPAIEVLRPIPPLAWIPLSYILFASFP 114 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP ++ + ++ ++ F I+ P +F E+A F + I+LP P Sbjct: 115 -NPTVFAQIFIVAVGAFFPSFVTISDYVRGIPQEFIELAKVFGARNFDLLTKIVLPYSLP 173 Query: 505 YYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTE-KGSFPEVVLGVLIM 562 +TG G W + I +E +AS G +GLG +I E G PE++ G+ ++ Sbjct: 174 GIITGIRVGLGVGWMSIIAAEMIASSG------SGLGYFILVMYEVGGRMPEILAGMAMI 227 Query: 563 CCFVLALNRFLWH 575 +N L+ Sbjct: 228 GLIGYLMNTLLFK 240 >gi|332994482|gb|AEF04537.1| putative nitrate ABC transporter permease [Alteromonas sp. SN2] Length = 331 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 16/198 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V+V +IAS+I +PVGI G + I P QL + PLV VS + Sbjct: 124 SLYTVMVGFLIASVIAVPVGILCGLSKSAYAAINPLIQLFKPVSPLAWLPLVTMVVSALY 183 Query: 446 LNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + S L + W L N G SA D V+ +T II Sbjct: 184 VSDDPMFSKSFVTSALTVSLCCLWPTLINTAVGVSAIDKDLLNVSKVLRLTPMSHLTKII 243 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 LP P TG + G W I +E+ + + GLG ++ + + G S + Sbjct: 244 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 297 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ VL + L+R + Sbjct: 298 MVAVLTIGAIGFILDRIM 315 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 9/103 (8%) Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 I +DL VS+ RL+ + +P S+P + + +S+ GW ++A+EM+ Sbjct: 220 IDKDLLNVSKVLRLTPMSHLTKIILPSSIPMIFTGLRLSLGIGWMVLIAAEMLAQN---- 275 Query: 221 PLPGIGSYIALAIK---EQDLLAILYAMLTMLGVIFLYDQLLF 260 PG+G ++ + + L I+ A+LT+ + F+ D+++ Sbjct: 276 --PGLGKFVWDEFQNGSSESLARIMVAVLTIGAIGFILDRIML 316 >gi|284990967|ref|YP_003409521.1| binding-protein-dependent transport systems inner membrane component [Geodermatophilus obscurus DSM 43160] gi|284064212|gb|ADB75150.1| binding-protein-dependent transport systems inner membrane component [Geodermatophilus obscurus DSM 43160] Length = 258 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A++ + +GI IG + ++P +L A P V P+ + + Sbjct: 60 SLLRLAAGFSVAAVSAVTLGILIGTYRGLRDFLEPVLELTRAIPPPVLVPIFILV---FG 116 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ + + +++ FG W IL N G A + A ++ ITG R+++LPG P Sbjct: 117 IDDTMKV-IVIAFGCVWPILLNTAEGVRALDGVLDDTARTYGITGAARLRHLVLPGAAPQ 175 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G A A ++SE+ + T GLG I ++ + PE+ G+L++ Sbjct: 176 IFAGLRQALSLAIILMVISELFA------ATNGLGFAIVQAQRSFAIPEMWAGMLVL 226 >gi|294649103|ref|ZP_06726545.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] gi|292824986|gb|EFF83747.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] Length = 302 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 13/173 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ V+ +I+S+I IPVG+ G P+ + P Q+ + P+V V+ + Sbjct: 95 SLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLAWLPIVSLLVASLY 154 Query: 446 LNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++P LS + + T W L N + G DF V+ +++ + I+ Sbjct: 155 VHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKVLNLSWYTHLTKIV 214 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 LP I P TG + G W I +E+ + + GLG ++ + + GS Sbjct: 215 LPAIIPMLFTGLRLSVGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 261 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 10/166 (6%) Query: 68 TTLR-MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 T+L+ +L+A +IS + L S L P++ I + I L +L + +L Sbjct: 94 TSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLAWLPIVSLLVASL 153 Query: 127 YPGKVIGAELAAIFAIFT---SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 Y + G + + + T +W + + I +D VS+ LS + + Sbjct: 154 YVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKVLNLSWYTHLTKI 213 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 +P +P L + +S+ GW ++A+EM+ PG+G ++ Sbjct: 214 VLPAIIPMLFTGLRLSVGVGWMVLIAAEMLAQN------PGLGKFV 253 >gi|226951848|ref|ZP_03822312.1| nitrate ABC transporter, permease protein [Acinetobacter sp. ATCC 27244] gi|226837388|gb|EEH69771.1| nitrate ABC transporter, permease protein [Acinetobacter sp. ATCC 27244] Length = 302 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 13/173 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ V+ +I+S+I IPVG+ G P+ + P Q+ + P+V V+ + Sbjct: 95 SLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLAWLPIVSLLVASLY 154 Query: 446 LNPNLWLSLLMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++P LS + T W L N + G DF V+ +++ + I+ Sbjct: 155 VHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKVLNLSWYTHLTKIV 214 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 LP I P TG + G W I +E+ + + GLG ++ + + GS Sbjct: 215 LPAIIPMVFTGLRLSVGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 261 >gi|325110800|ref|YP_004271868.1| binding-protein-dependent transporters inner membrane component [Planctomyces brasiliensis DSM 5305] gi|324971068|gb|ADY61846.1| binding-protein-dependent transport systems inner membrane component [Planctomyces brasiliensis DSM 5305] Length = 253 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 10/177 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 C+++ RV ++A+++ I +G IG + Q L P +FPL V Sbjct: 56 CVSLLRVFEGFLLAAVLGILIGSAIGLWATFDKTVDWLLQTLKPIPPIGWFPLAVLWFGI 115 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 ++ ++ G + IL NVI G + + E+A + I W+++R +I+PG Sbjct: 116 GEVSK----VFIIFLGAFFPILINVIDGIRQADHRYIELAKVYEIGWWKFFRKVIVPGAM 171 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P +TG G AW + +E+ + +G+G I ++ + V++G+L Sbjct: 172 PSILTGLRVGIGFAWTCVVAAELIA------AESGVGYLIVDARQTFRADVVIVGML 222 >gi|315179819|gb|ADT86733.1| nitrate transporter system, permease component [Vibrio furnissii NCTC 11218] Length = 322 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 13/163 (7%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLS 453 +AS+I IP+GI +G + + P QLL + P+V VS Y +P S Sbjct: 125 LASLIAIPLGIVLGLNHGLYQAVNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAKS 184 Query: 454 -----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L + + W L N G ++ D V+ ++ W+ R I+LP P T Sbjct: 185 FVNSLLTVALCSVWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIVLPSAIPMIFT 244 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 G + G AW I +E+ + + GLG ++ + + GS Sbjct: 245 GLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 VW + + ++ +DL VS+ RLS WQ + +P ++P + + +S+ W Sbjct: 197 VWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 256 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 257 LIAAEMLAQN------PGLGKFV 273 >gi|261855716|ref|YP_003262999.1| binding-protein-dependent transporters inner membrane component [Halothiobacillus neapolitanus c2] gi|261836185|gb|ACX95952.1| binding-protein-dependent transport systems inner membrane component [Halothiobacillus neapolitanus c2] Length = 320 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 16/189 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 I+AS+I IP+GI IG + + + P Q+L + PLV VS Y +P Sbjct: 122 ILASLIAIPLGIAIGLSSSLHAAVNPIIQILRPVSPLAWLPLVTIVVSALYASNDPMFSK 181 Query: 453 SLLMIFGTQ-----WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L+ T W + N G +A D V+ + W R I++P P Sbjct: 182 SYLVSMITVLLCCLWPTIINTAVGVAAISQDLTNVSRVLRLNWWTHVRKIVVPSALPMMF 241 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + AW I +E+ + + GLG ++ + + G S +++ V+++ Sbjct: 242 TGLRLSLSIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLSRIMVAVVVIGL 295 Query: 565 FVLALNRFL 573 L+R + Sbjct: 296 IGFMLDRTM 304 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 22/224 (9%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPIL 113 P T + + ++++L F+ A+L A S L + PI+ I++ + L Sbjct: 99 PYTGQPTFVSQIGTSLVTVLSGFILASLIAIPLGIAIGLSSSLHAAVNPIIQILRPVSPL 158 Query: 114 GFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170 +L + LY + L ++ + +W + + I +DL VSR Sbjct: 159 AWLPLVTIVVSALYASNDPMFSKSYLVSMITVLLCCLWPTIINTAVGVAAISQDLTNVSR 218 Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI- 229 RL+ W + VP ++P + + +S+S W ++A+EM+ PG+G ++ Sbjct: 219 VLRLNWWTHVRKIVVPSALPMMFTGLRLSLSIAWMVLIAAEMLAQN------PGLGKFVW 272 Query: 230 -ALAIKEQDLLAILYAMLTMLGVI-FLYDQ--LLFRPMIVWSNK 269 D L+ + + ++G+I F+ D+ LL + I W K Sbjct: 273 DEFQNGSSDSLSRIMVAVVVIGLIGFMLDRTMLLLQRWISWDKK 316 >gi|209526508|ref|ZP_03275034.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] gi|209493014|gb|EDZ93343.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] Length = 410 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 14/161 (8%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L PI I+++IP L +L ++ F P +AIF IF + +W + + + + Sbjct: 253 ALDPIFQILRTIPPLAWLPISLAGFERANP--------SAIFVIFITAIWPIIINTTEGV 304 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 IP+D VSR RL F+ + P ++P + + + + W ++A+EM++ G Sbjct: 305 RQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGG-- 362 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V L D+ + Sbjct: 363 ----VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 399 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILF 466 IG + + P Q+L P + P +S + NP+ ++ +IF T W I+ Sbjct: 244 IGTNTLMYRALDPIFQILRTIPPLAWLP--ISLAGFERANPS---AIFVIFITAIWPIII 298 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N G P D+ V+ + ++ I+ P PY TG G +W A I +E+ Sbjct: 299 NTTEGVRQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEM 358 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G G+G +I ++ +++L V+ + L L++F+ Sbjct: 359 LIGG------VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 399 >gi|13472532|ref|NP_104099.1| nitrate transporter component, nrtB [Mesorhizobium loti MAFF303099] gi|14023278|dbj|BAB49885.1| nitrate transporter component; NrtB [Mesorhizobium loti MAFF303099] Length = 298 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 16/161 (9%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ I++++P L +L ++ F + P +A+F IF + +W + + + Sbjct: 139 LDPVFQILRTVPPLAWLPLSLAAFRDSSP--------SALFVIFITSIWPIIINTAVGVR 190 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+R RL+ ++ F + VP + P + + + + W +VA+EM+ G Sbjct: 191 NIPQDYRNVARILRLNPFEFFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 248 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259 GIG +I A L I+ A L +GV F D+L+ Sbjct: 249 ----GIGFFIWDAWNSSRLPDIIVA-LAYIGVTGFCLDRLV 284 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 13/201 (6%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 QD+ + W I++ RV + +A+I+ + +G +G + P Q+L P + Sbjct: 96 QDI-GLAWRVLISLQRVAIGFGLAAIVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAW 154 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492 PL S ++ +P+ +L +IF T W I+ N G P D++ VA + + Sbjct: 155 LPL--SLAAFRDSSPS---ALFVIFITSIWPIIINTAVGVRNIPQDYRNVARILRLNPFE 209 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++ I++P PY TG G +W A + +E+ + G G+G +I ++ Sbjct: 210 FFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRL 263 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 P++++ + + L+R + Sbjct: 264 PDIIVALAYIGVTGFCLDRLV 284 >gi|192361570|ref|YP_001982783.1| AtsB [Cellvibrio japonicus Ueda107] gi|190687735|gb|ACE85413.1| AtsB [Cellvibrio japonicus Ueda107] Length = 266 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 87/180 (48%), Gaps = 16/180 (8%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +R + +++ P+ + ++ +P+LG ++F N + A +F I + + M Sbjct: 99 ARLVALLVNPLYNALRQVPLLGLTPLIGLWFGN--------GDEAKVFIIALAAFYPMVL 150 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Y+ L N+ EV + + S WQ+F + P ++P LV +++++ W + SE+ Sbjct: 151 NSYEGLRNVDGRFREVGQIYGFSRWQQFRLVLWPAALPNLVTGLLLAIPFAWITCIGSEL 210 Query: 213 IVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVIFLYD-QLLFRPMIVWSNK 269 + G+G+ + A A D++ I ++T+LGV+ Y +L ++ W K Sbjct: 211 LFNAGA-----GLGNLMMTAEASARMDIILICALVVTLLGVVMNYAVSVLGNYLLRWRGK 265 >gi|56751996|ref|YP_172697.1| sulfonate/nitrate transport system permease [Synechococcus elongatus PCC 6301] gi|81300915|ref|YP_401123.1| nitrate transport permease [Synechococcus elongatus PCC 7942] gi|2150109|gb|AAB58737.1| integral membrane protein [Synechococcus elongatus PCC 7942] gi|2330515|dbj|BAA21794.1| intrinsic membrane protein [Synechococcus elongatus PCC 7942] gi|56686955|dbj|BAD80177.1| sulfonate/nitrate transport system permease protein [Synechococcus elongatus PCC 6301] gi|81169796|gb|ABB58136.1| nitrate transport permease [Synechococcus elongatus PCC 7942] Length = 263 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 11/179 (6%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L + W I++ RV + ++A+++ IP+GI IG SS PF QLL + P+ Sbjct: 65 LGIGWNLLISLRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAWLPI 124 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + + L +++ + W L N G + DF +V+ S + WR Sbjct: 125 GL----FLFRDSELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRTILK 180 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 +ILP P + G + G AW + +E+ L TG+G +I S P + Sbjct: 181 VILPAALPSIIAGMRISMGIAWLVIVAAEM-------LLGTGIGYFIWNEWNNLSLPNI 232 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 43/81 (53%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +EL +F I S +W + + N+ D +VS+S S W+ + +P ++P ++ Sbjct: 132 SELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRTILKVILPAALPSII 191 Query: 194 WNMMMSMSGGWFFVVASEMIV 214 M +SM W +VA+EM++ Sbjct: 192 AGMRISMGIAWLVIVAAEMLL 212 >gi|296271945|ref|YP_003654576.1| nitrate ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096120|gb|ADG92070.1| nitrate ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 269 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 8/172 (4%) Query: 362 QSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 + IG + + F T QD + W ++ RV I+A II +PVG+ IG + ++ Sbjct: 53 EVIGVLSDPFYITNQDDKGIFWQVLNSLERVFSGFILAIIIGVPVGLAIGMSKNFQIALE 112 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPND 478 PF Q+ + PL++ + +N ++ IF T W I+ N G + D Sbjct: 113 PFIQIFKPVSPLAWLPLLLFV--FQDINAT---AISTIFVTSIWPIIINTSLGVKSVSED 167 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 + VA T R IILP PY TG + G AW + +E+ + G Sbjct: 168 YMNVAKVLQFTPLEKIRKIILPVAVPYIFTGMRLSLGIAWLVIVAAEMLTGG 219 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 27/146 (18%), Positives = 64/146 (43%), Gaps = 8/146 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ S +++++ S+ + L P + I + + L +L + F ++ Sbjct: 82 RVFSGFILAIIIGVPVGLAIGMSKNFQIALEPFIQIFKPVSPLAWLPLLLFVFQDI---- 137 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AI IF + +W + + + ++ D V++ + + +K + +P ++P Sbjct: 138 ----NATAISTIFVTSIWPIIINTSLGVKSVSEDYMNVAKVLQFTPLEKIRKIILPVAVP 193 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216 + M +S+ W +VA+EM+ G Sbjct: 194 YIFTGMRLSLGIAWLVIVAAEMLTGG 219 >gi|87119186|ref|ZP_01075084.1| putative nitrate transporter [Marinomonas sp. MED121] gi|86165577|gb|EAQ66844.1| putative nitrate transporter [Marinomonas sp. MED121] Length = 330 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 16/198 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443 +++ VV +AS+I IP+GI IG I S + P Q+ + PLV VS Y Sbjct: 123 SLYTVVAGFALASLIAIPLGILIGLNSSIYSALNPIIQIFKPVSPLAWLPLVTMVVSATY 182 Query: 444 YHLNPNLWLSLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 +P S L T W L N G +A D V+ + R I+ Sbjct: 183 VSADPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAIDKDLLNVSKVLRLNWLTHVRKIV 242 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 +P P TG + G AW I +E+ + + GLG ++ + + G S + Sbjct: 243 VPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 296 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ VL++ L+R + Sbjct: 297 MVAVLMIGFIGFVLDRAM 314 >gi|307292771|ref|ZP_07572617.1| nitrate ABC transporter, inner membrane subunit [Sphingobium chlorophenolicum L-1] gi|306880837|gb|EFN12053.1| nitrate ABC transporter, inner membrane subunit [Sphingobium chlorophenolicum L-1] Length = 318 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 14/209 (6%) Query: 368 VNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + HF+ QD V G + ++ RV++ IA++I + +GI IG + P Q+L Sbjct: 110 LTHFSIQDGGDVGIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQVL 169 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVAS 484 P + P +S + P+ ++ +IF T W ++ N AG P ++ VA Sbjct: 170 RTVPPLAWLP--ISLAIFQQAQPS---AIFLIFITAIWPVILNTAAGVQTIPAAYRNVAK 224 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + ++ I+LP P+ TG G +W A + +E+ G TG+G +I Sbjct: 225 VLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGG------TGVGFFIW 278 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +S + ++ ++ + AL+R + Sbjct: 279 DSYNSSLLTDTIVALIWIGMVGFALDRIV 307 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 8/120 (6%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ +++++P L +L ++ F P +AIF IF + +W + + + Sbjct: 162 LDPLFQVLRTVPPLAWLPISLAIFQQAQP--------SAIFLIFITAIWPVILNTAAGVQ 213 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP V++ L+ + F + +P ++P + + + + W +VA+EM+ G V Sbjct: 214 TIPAAYRNVAKVLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGGTGV 273 >gi|104781070|ref|YP_607568.1| ABC transporter permease [Pseudomonas entomophila L48] gi|95110057|emb|CAK14762.1| putative ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 251 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 10/186 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R++V +++A +I +P+G+ +G H+ + P Q L + P+VV + Sbjct: 63 VSLKRILVGLVLALLIGVPLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGVG 122 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P + L+ F W IL N AG + +++ S T W +I+PG+ Sbjct: 123 D-QP---IYFLLAFAALWPILLNTAAGVRQLDPRWLQLSRSLSATRWETLCKVIVPGVIG 178 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + +TG A G W + E+ + GLG +I ++ ++ ++ E++ VL++ Sbjct: 179 HVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLIGV 232 Query: 565 FVLALN 570 L+ Sbjct: 233 LGFMLD 238 >gi|298290413|ref|YP_003692352.1| nitrate ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926924|gb|ADH87733.1| nitrate ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 303 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L + F + P +AIF IF + +W + + + Sbjct: 145 LDPIFQVLRTVPPLAWLPIALAAFRDSNP--------SAIFVIFITAIWPVIINTAVGVR 196 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V++ RL+ ++ F + +P + P + + + + W +VA+EM+ G Sbjct: 197 NIPQDYRNVAQVLRLNPFEFFAKIMLPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV-- 254 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A++ + V F+ D+L+ Sbjct: 255 ----GIGFFIWDAWNSSRLSDIIVALVYIGVVGFVLDRLV 290 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 17/218 (7%) Query: 361 WQ-SIGYIVNHF---TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 WQ S IV+ F QD+ + W +++ RV + +A+ + I +G+ IG Sbjct: 85 WQDSYDLIVDPFFVNGPQDI-GLGWRVLVSLQRVAIGFGLAAGVGILLGVLIGQSVWAMR 143 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAF 475 + P Q+L P + P ++ ++ NP+ ++ +IF T W ++ N G Sbjct: 144 GLDPIFQVLRTVPPLAWLP--IALAAFRDSNPS---AIFVIFITAIWPVIINTAVGVRNI 198 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D++ VA + + ++ I+LP PY TG G +W A + +E+ + G Sbjct: 199 PQDYRNVAQVLRLNPFEFFAKIMLPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGG----- 253 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ ++++ ++ + L+R + Sbjct: 254 -VGIGFFIWDAWNSSRLSDIIVALVYIGVVGFVLDRLV 290 >gi|269963835|ref|ZP_06178149.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831453|gb|EEZ85598.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 321 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A+II IP+GI +G + P QLL + P+V VS Y +P Sbjct: 123 LLATIIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 256 LIAAEMLAQN------PGLGKFV 272 >gi|284054400|ref|ZP_06384610.1| nitrate ABC transporter, inner membrane subunit [Arthrospira platensis str. Paraca] Length = 291 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI I+++IP L +L ++ F P +AIF IF + +W + + + + Sbjct: 135 LDPIFQILRTIPPLAWLPISLAGFERANP--------SAIFVIFITAIWPIIINTTEGVR 186 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP+D VSR RL F+ + P ++P + + + + W ++A+EM++ G Sbjct: 187 QIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGGV-- 244 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V L D+ + Sbjct: 245 ----GIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 280 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILF 466 IG + + P Q+L P + P +S + NP+ ++ +IF T W I+ Sbjct: 125 IGTNTLMYRALDPIFQILRTIPPLAWLP--ISLAGFERANPS---AIFVIFITAIWPIII 179 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N G P D+ V+ + ++ I+ P PY TG G +W A I +E+ Sbjct: 180 NTTEGVRQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEM 239 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G G+G +I ++ +++L V+ + L L++F+ Sbjct: 240 LIGG------VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 280 >gi|134300613|ref|YP_001114109.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] gi|134053313|gb|ABO51284.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] Length = 252 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 10/178 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++++RV++ ++ A+++ +P+GI++G P + K P L P VF P+ + + Sbjct: 61 VSLYRVLLSLLSATLLAVPLGIFLGKNPEVDRKAAPLLYLTYPIPKVVFMPIFLIILGIG 120 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L ++L+ T + IL A ++ S + W +R++ LPG P Sbjct: 121 DSSKILLITLI----TFYQILVTTRDAAKNMAKEYIFSLKSLGASSWDLYRHVYLPGCLP 176 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +T G A ++E + TG+G +I +S + ++ E+ G++ M Sbjct: 177 AILTALRLGLGTAMAVLFLAET------YATQTGIGFFIMDSLSRMNYEEMFAGIIAM 228 >gi|227533843|ref|ZP_03963892.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188544|gb|EEI68611.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 283 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L+A +++++ AA+S+ + V+ P++D MQ++P +L V +F + Sbjct: 98 TQTLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGI 157 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T M Q + +P DL E + +F +GWQ+ + Sbjct: 158 GMVPGVV----ASVIFAM------PPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKV 207 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +PF+ M G+ +MM+++S M+V+ ++I G+G+ + A+ D Sbjct: 208 QLPFARGTIMAGINQSMMLALS----------MVVIA-SMIGAMGLGTKVYFAVGRND 254 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 28/127 (22%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP---FAQLLAAF----PANVFF---- 434 T+ V+ ++A +I +P+GIW +S+ ++P F Q + AF PA FF Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159 Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P VV+ V + + P + ++ L G + P D E A +F TGW+ Sbjct: 160 VPGVVASV-IFAMPPTVRMTQL---------------GITQVPADLNEAAVAFGATGWQQ 203 Query: 494 WRYIILP 500 + LP Sbjct: 204 LLKVQLP 210 >gi|11498247|ref|NP_069473.1| nitrate ABC transporter, permease protein (nrtB-2) [Archaeoglobus fulgidus DSM 4304] gi|2649975|gb|AAB90597.1| nitrate ABC transporter, permease protein (nrtB-2) [Archaeoglobus fulgidus DSM 4304] Length = 248 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 10/204 (4%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+A + R+L+A ++ ++ +R L + P ++ ++ IP L ++ Sbjct: 45 KTLVQHAVASLFRVLAASFLAFSIAVPLGIISGWNRTLMEFIAPAVEALRPIPPLAWIPL 104 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 + F L P V E++ IF +F + S++ N+P +L E++ F+ Sbjct: 105 AYIIFAPL-PNTV---EVSQIFIVFVGAFFPCFISVFDYARNVPEELLEMAEVFKAPERL 160 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + VP S+ G++ + + + GW ++A+EMI G+G +I + Sbjct: 161 IITDIVVPHSLQGIMSGVRIGLGVGWMSIIAAEMIATSGE-----GLGYFIMVMYNVGGR 215 Query: 239 LAILYAMLTMLGVI-FLYDQLLFR 261 A + A + M+G+I ++ + LL R Sbjct: 216 TAEIVAGMAMIGIIGYMMNWLLLR 239 >gi|291571065|dbj|BAI93337.1| nitrate ABC-type transport permease protein [Arthrospira platensis NIES-39] Length = 278 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI I+++IP L +L ++ F P +AIF IF + +W + + + + Sbjct: 122 LDPIFQILRTIPPLAWLPISLAGFERANP--------SAIFVIFITAIWPIIINTTEGVR 173 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP+D VSR RL F+ + P ++P + + + + W ++A+EM++ G Sbjct: 174 QIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGG--- 230 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V L D+ + Sbjct: 231 ---VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 267 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILF 466 IG + + P Q+L P + P +S + NP+ ++ +IF T W I+ Sbjct: 112 IGTNTLMYRALDPIFQILRTIPPLAWLP--ISLAGFERANPS---AIFVIFITAIWPIII 166 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N G P D+ V+ + ++ I+ P PY TG G +W A I +E+ Sbjct: 167 NTTEGVRQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIFTGLKIGIGLSWLAIIAAEM 226 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G G+G +I ++ +++L V+ + L L++F+ Sbjct: 227 LIGG------VGIGFFIWDAWNSSRMSDIILAVIYVGVVGLLLDKFI 267 >gi|191639085|ref|YP_001988251.1| Putative glycine betaine membrane transport protein GbuB (GbuB protein) [Lactobacillus casei BL23] gi|190713387|emb|CAQ67393.1| Putative glycine betaine membrane transport protein GbuB (GbuB protein) [Lactobacillus casei BL23] gi|327383149|gb|AEA54625.1| hypothetical protein LC2W_2294 [Lactobacillus casei LC2W] gi|327386333|gb|AEA57807.1| hypothetical protein LCBD_2312 [Lactobacillus casei BD-II] Length = 283 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L+A +++++ AA+S+ + V+ P++D MQ++P +L V +F + Sbjct: 98 TQTLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGI 157 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T M Q + +P DL E + +F +GWQ+ + Sbjct: 158 GMVPGVVA----SVIFAM------PPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKV 207 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +PF+ M G+ +MM+++S M+V+ ++I G+G+ + A+ D Sbjct: 208 QLPFARGTIMAGINQSMMLALS----------MVVIA-SMIGAMGLGTKVYFAVGRND 254 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 28/127 (22%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP---FAQLLAAF----PANVFF---- 434 T+ V+ ++A +I +P+GIW +S+ ++P F Q + AF PA FF Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159 Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P VV+ V + + P + ++ L G + P D E A +F TGW+ Sbjct: 160 VPGVVASV-IFAMPPTVRMTQL---------------GITQVPADLNEAAVAFGATGWQQ 203 Query: 494 WRYIILP 500 + LP Sbjct: 204 LLKVQLP 210 >gi|260464097|ref|ZP_05812291.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259030082|gb|EEW31364.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 296 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 16/161 (9%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ I++++P L +L ++ F + P +A+F IF + +W + + + Sbjct: 137 LDPVFQILRTVPPLAWLPLSLAAFRDSSP--------SALFVIFITSIWPIIINTAVGVR 188 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+R RL+ + F + VP + P + + + + W +VA+EM+ G Sbjct: 189 NIPQDYRNVARILRLNPLEFFIKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV-- 246 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL 259 GIG +I A L I+ A L +GV F D+L+ Sbjct: 247 ----GIGFFIWDAWNSSRLPDIIVA-LAYIGVTGFCLDRLV 282 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 13/201 (6%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 QD+ + W I++ RV + +A+++ + +G +G + P Q+L P + Sbjct: 94 QDI-GLAWRVLISLQRVAIGFGMAAVVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAW 152 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492 PL S ++ +P+ +L +IF T W I+ N G P D++ VA + Sbjct: 153 LPL--SLAAFRDSSPS---ALFVIFITSIWPIIINTAVGVRNIPQDYRNVARILRLNPLE 207 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++ I++P PY TG G +W A + +E+ + G G+G +I ++ Sbjct: 208 FFIKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRL 261 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 P++++ + + L+R + Sbjct: 262 PDIIVALAYIGVTGFCLDRLV 282 >gi|17230827|ref|NP_487375.1| ABC nitrate transport permease protein [Nostoc sp. PCC 7120] gi|17132430|dbj|BAB75034.1| ABC nitrate transport permease protein [Nostoc sp. PCC 7120] Length = 273 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 10/193 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 WL ++ RVVV ++A+ I IP+G I I P QLL + PL + Sbjct: 80 WLILASLKRVVVGYLLATFIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQAV 139 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L PN ++ W I+ N G P D++ V+ ++ + I+LP Sbjct: 140 ----FLKPNPSAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLENFYKILLP 195 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 PY TG A G +W A + +E+ L G+G +I ++ + E++L ++ Sbjct: 196 ATLPYIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILAIV 249 Query: 561 IMCCFVLALNRFL 573 + L L++ + Sbjct: 250 YLGAVGLVLDKIM 262 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 77/158 (48%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L F+ P +AIF I + +W + + + + Sbjct: 119 PLIQLLRPVAPLAWLPLAQAVFLKPNP--------SAIFVICITAIWPIILNTALGVKLV 170 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D VS+ LS + F+ + +P ++P + + +++ W VVA+EM++ D Sbjct: 171 PKDYRNVSKLLGLSPLENFYKILLPATLPYIFTGLRIAIGLSWLAVVAAEMLLSDD---- 226 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A ++ ++ A++ + V + D+++ Sbjct: 227 --GIGFFIVDAYNNANIHEMILAIVYLGAVGLVLDKIM 262 >gi|269967484|ref|ZP_06181541.1| putative nitrate transporter [Vibrio alginolyticus 40B] gi|269827925|gb|EEZ82202.1| putative nitrate transporter [Vibrio alginolyticus 40B] Length = 321 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A++I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLVNVSKVLQLSWWQHIRTIVLPSAIPMIF 242 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 196 LWPTLINTAVGVTSVDKDLVNVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 256 LIAAEMLAQN------PGLGKFV 272 >gi|86605595|ref|YP_474358.1| nitrate ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] gi|86554137|gb|ABC99095.1| nitrate ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 275 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + A+++ I +GI +G I+ + P Q L + PL +S Sbjct: 87 SLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFL-----RMVAPLAWVPISLAA 141 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 N +L +IF T W IL N G P D+ V+ ++ ++ ++LP + P Sbjct: 142 SQRNEPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVLLPSVLP 201 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A I +E+ G G+G +I ++ ++ E+++ V+ + Sbjct: 202 YMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVAVIYIGA 256 Query: 565 FVLALNRFL 573 L L+R + Sbjct: 257 VGLLLDRLV 265 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 66/125 (52%), Gaps = 5/125 (4%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AA+F IF + +W + + + IP D VS+ +LS F+ + +P +P + Sbjct: 146 EPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVLLPSVLPYMFT 205 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + + + W ++A+E+++ G +PGIG +I A ++ + I+ A++ + V L Sbjct: 206 GLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVAVIYIGAVGLL 260 Query: 255 YDQLL 259 D+L+ Sbjct: 261 LDRLV 265 >gi|254506550|ref|ZP_05118691.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Vibrio parahaemolyticus 16] gi|219550423|gb|EED27407.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Vibrio parahaemolyticus 16] Length = 289 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A++I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 91 LLATVIAIPLGIILGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSAIYVSDDPMFAK 150 Query: 453 S-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 151 SFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIF 210 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 211 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 248 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 164 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMV 223 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 224 LIAAEMLAQN------PGLGKFV 240 >gi|26986952|ref|NP_742377.1| nitrate ABC transporter, permease protein, putative [Pseudomonas putida KT2440] gi|24981564|gb|AAN65841.1|AE016212_7 nitrate ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 260 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 32/238 (13%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ--SIGYIVNHFTYQDVLYVIWLGCITMF 388 F Q+ +N ++ L F + + AWQ + ++ H LG ++ Sbjct: 21 FWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAH-----------LGS-SLA 68 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV A+++ + +G+ IG + P ++L PA + PL + + P Sbjct: 69 RVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAI------LMFP 122 Query: 449 NLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPGIFP 504 + LS++ I G + IL N + G A D + VAS+ + RW R ++LPG P Sbjct: 123 SSELSMVFITFTGALFPILLNTVHGVEAV--DPRLVASARSLGAGRWAILREVVLPGALP 180 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 VTG G +W + +E+ S G G+G Y ES ++P++V+G+L++ Sbjct: 181 SIVTGLAIGMGTSWFCLVTAEMIS-GQF-----GIGYYTWESYTLQNYPDIVVGMLLI 232 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 33/169 (19%), Positives = 74/169 (43%), Gaps = 8/169 (4%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P+ ++D L +L + + R+ + + L L +S+ L+P L Sbjct: 43 PKAVLDAAWQLLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPL 102 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++ IP + ++ ++ F + +EL+ +F FT ++ + + + + Sbjct: 103 EVLRPIPAVAWIPLAILMFPS--------SELSMVFITFTGALFPILLNTVHGVEAVDPR 154 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L +RS W + +P ++P +V + + M WF +V +EMI Sbjct: 155 LVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMI 203 >gi|89092993|ref|ZP_01165944.1| putative nitrate transporter [Oceanospirillum sp. MED92] gi|89082643|gb|EAR61864.1| putative nitrate transporter [Oceanospirillum sp. MED92] Length = 328 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 15/195 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443 ++ V+ ++AS+I IP GI IG + S P QL + PLV VS Y Sbjct: 121 SLITVLAGFVLASLIAIPAGIMIGLNQTLYSAFNPLIQLFKPVSPLAWLPLVTMVVSAVY 180 Query: 444 YHLNPNLWLSLLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 +P S + T W L N G S D + V+ ++ I+ Sbjct: 181 VSKDPMFAKSFITSLITVSLCCLWPTLLNTAVGVSGISKDLQNVSQVLRLSWLAHVTKIV 240 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + G AW I +E+ + + GLG ++ + + GS LG Sbjct: 241 LPSSIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSS--LG 292 Query: 559 VLIMCCFVLALNRFL 573 +++ V+ L FL Sbjct: 293 RIMVAVLVIGLIGFL 307 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 7/130 (5%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + I +DL+ VS+ RLS + +P S+P + + +S+ W Sbjct: 203 LWPTLLNTAVGVSGISKDLQNVSQVLRLSWLAHVTKIVLPSSIPMIFTGLRLSLGIAWMV 262 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 ++A+EM+ PG+G ++ + ++ M+ +L VI L LL R M++ Sbjct: 263 LIAAEMLAQN------PGLGKFVWDEFQNGSSSSLGRIMVAVL-VIGLIGFLLDRVMLLI 315 Query: 267 SNKFRLERTT 276 K ++T Sbjct: 316 QKKVSWDKTA 325 >gi|156976813|ref|YP_001447719.1| hypothetical protein VIBHAR_05589 [Vibrio harveyi ATCC BAA-1116] gi|156528407|gb|ABU73492.1| hypothetical protein VIBHAR_05589 [Vibrio harveyi ATCC BAA-1116] Length = 321 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A++I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280 Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 256 LIAAEMLAQN------PGLGKFV 272 >gi|146339772|ref|YP_001204820.1| putative nitrate ABC transporter permease (ntrB-like protein) [Bradyrhizobium sp. ORS278] gi|146192578|emb|CAL76583.1| putative nitrate ABC transporter (permease protein) (ntrB-like protein) [Bradyrhizobium sp. ORS278] Length = 279 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 12/186 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV++ +IA I IP+G IG P +S + PF Q+L + PL + + L+ Sbjct: 94 RVMLGYLIAVAIAIPLGFLIGMSPLMSKALDPFIQILKPISPLAWMPLALYTIKDSSLS- 152 Query: 449 NLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 ++ +IF + W +L N G ++ ++ VA + + +R +ILP P + Sbjct: 153 ----AIFVIFICSVWPMLINTAFGVASVRKEWINVARTLEVGNFRRAFTVILPAAAPTIL 208 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G AW + +E+ G TG+G ++ S V++ +L++ + Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILLIGVVGM 262 Query: 568 ALNRFL 573 L++ L Sbjct: 263 VLDQLL 268 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+AIF IF VW M + + ++ ++ V+R+ + +++ + + +P + P ++ Sbjct: 149 SSLSAIFVIFICSVWPMLINTAFGVASVRKEWINVARTLEVGNFRRAFTVILPAAAPTIL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ + ++ A+L + V Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILLIGVVGM 262 Query: 254 LYDQLLFR 261 + DQLL R Sbjct: 263 VLDQLLAR 270 >gi|28900912|ref|NP_800567.1| putative nitrate transporter [Vibrio parahaemolyticus RIMD 2210633] gi|28809358|dbj|BAC62400.1| putative nitrate transporter [Vibrio parahaemolyticus RIMD 2210633] Length = 307 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A++I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 109 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 168 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 169 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 228 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 229 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 266 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 182 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 241 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 242 LIAAEMLAQN------PGLGKFV 258 >gi|330448062|ref|ZP_08311710.1| binding--dependent transport system inner membrane component family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492253|dbj|GAA06207.1| binding--dependent transport system inner membrane component family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 324 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWL 452 ++AS+I IP+G+ +G + P QLL + PLV V SY +P + Sbjct: 126 LLASVIAIPLGLLLGLNHKLYMAFNPVIQLLKPVSPLAWLPLVTMVVSASYVSDDPLVAK 185 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L + + W L N G + D V+ ++ W+ + I+LP P Sbjct: 186 SFLNSMFTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSPWQHVKTIVLPSAIPMIF 245 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 246 TGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 283 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 9/140 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWN 149 + +L M P++ +++ + L +L + Y V + L ++F + +W Sbjct: 142 NHKLYMAFNPVIQLLKPVSPLAWLPLVTMVVSASYVSDDPLVAKSFLNSMFTVTLCSLWP 201 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + N+ +DL VSR RLS WQ + +P ++P + + +S+ W ++A Sbjct: 202 TLINTAVGVTNVDKDLVNVSRVLRLSPWQHVKTIVLPSAIPMIFTGLRLSIGIAWMVLIA 261 Query: 210 SEMIVVGDTVIPLPGIGSYI 229 +EM+ PG+G ++ Sbjct: 262 AEMLAQN------PGLGKFV 275 >gi|239630003|ref|ZP_04673034.1| ABC-type proline/glycine betaine transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527615|gb|EEQ66616.1| ABC-type proline/glycine betaine transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 293 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L+A +++++ AA+S+ + V+ P++D MQ++P +L V +F + Sbjct: 108 TQTLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGI 167 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T M Q + +P DL E + +F +GWQ+ + Sbjct: 168 GMVPGVVA----SVIFAM------PPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKV 217 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +PF+ M G+ +MM+++S M+V+ ++I G+G+ + A+ D Sbjct: 218 QLPFARGTIMAGINQSMMLALS----------MVVIA-SMIGAMGLGTKVYFAVGRND 264 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 28/127 (22%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP---FAQLLAAF----PANVFF---- 434 T+ V+ ++A +I +P+GIW +S+ ++P F Q + AF PA FF Sbjct: 110 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 169 Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P VV+ V + + P + ++ L G + P D E A +F TGW+ Sbjct: 170 VPGVVASV-IFAMPPTVRMTQL---------------GITQVPADLNEAAVAFGATGWQQ 213 Query: 494 WRYIILP 500 + LP Sbjct: 214 LLKVQLP 220 >gi|301067141|ref|YP_003789164.1| putative glycine/betaine/carnitine ABC transporter membrane-spanning subunit [Lactobacillus casei str. Zhang] gi|300439548|gb|ADK19314.1| Putative glycine/betaine/carnitine ABC transporter, membrane-spanning subunit [Lactobacillus casei str. Zhang] Length = 283 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L+A +++++ AA+S+ V+ P++D MQ++P +L V +F + Sbjct: 98 TQTLTLVLTASLLAIVIGVPLGIWAAESKSFSAVVKPLMDFMQTMPAFVYLIPAVAFFGI 157 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T M Q + +P DL E + +F +GWQ+ + Sbjct: 158 GMVPGVVA----SVIFAM------PPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKV 207 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +PF+ M G+ +MM+++S M+V+ ++I G+G+ + A+ D Sbjct: 208 QLPFARGTIMAGINQSMMLALS----------MVVIA-SMIGAMGLGTKVYFAVGRND 254 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 28/127 (22%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP---FAQLLAAF----PANVFF---- 434 T+ V+ ++A +I +P+GIW S+ ++P F Q + AF PA FF Sbjct: 100 TLTLVLTASLLAIVIGVPLGIWAAESKSFSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 159 Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P VV+ V + + P + ++ L G + P D E A +F TGW+ Sbjct: 160 VPGVVASV-IFAMPPTVRMTQL---------------GITQVPADLNEAAVAFGATGWQQ 203 Query: 494 WRYIILP 500 + LP Sbjct: 204 LLKVQLP 210 >gi|260366125|ref|ZP_05778585.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260879767|ref|ZP_05892122.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260896812|ref|ZP_05905308.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260902977|ref|ZP_05911372.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308087350|gb|EFO37045.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308092367|gb|EFO42062.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308108312|gb|EFO45852.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308114769|gb|EFO52309.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|328470814|gb|EGF41725.1| nitrate ABC transporter permease protein [Vibrio parahaemolyticus 10329] Length = 321 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A++I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 256 LIAAEMLAQN------PGLGKFV 272 >gi|91224555|ref|ZP_01259816.1| putative nitrate transporter [Vibrio alginolyticus 12G01] gi|91190443|gb|EAS76711.1| putative nitrate transporter [Vibrio alginolyticus 12G01] Length = 321 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A++I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 256 LIAAEMLAQN------PGLGKFV 272 >gi|262396901|ref|YP_003288754.1| nitrate ABC transporter permease protein [Vibrio sp. Ex25] gi|262340495|gb|ACY54289.1| nitrate ABC transporter permease protein [Vibrio sp. Ex25] Length = 321 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A++I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 123 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 182 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 183 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 242 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 243 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 280 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 196 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 255 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 256 LIAAEMLAQN------PGLGKFV 272 >gi|153837223|ref|ZP_01989890.1| nitrate transporter system, permease component [Vibrio parahaemolyticus AQ3810] gi|149749486|gb|EDM60240.1| nitrate transporter system, permease component [Vibrio parahaemolyticus AQ3810] Length = 323 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A++I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 125 LLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 184 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 185 SFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIF 244 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 245 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 282 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 198 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 257 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 258 LIAAEMLAQN------PGLGKFV 274 >gi|300918768|ref|ZP_07135339.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300414090|gb|EFJ97400.1| ABC transporter, permease protein [Escherichia coli MS 115-1] Length = 298 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ RV+ I+A II +P+GI +G I + +PF PA+ F PL++ Sbjct: 107 MTVMRVLGGFILACIIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILWAGIG 166 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+IF G+ + I V A D E A + T R +I+PG Sbjct: 167 EMQ-----KILVIFIGSFFQITLMVAVAVGAARRDLVEAAYTLGATNKSVVRRVIIPGAA 221 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I S + +++ G++++ Sbjct: 222 PEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVNSQALLNTGQMIFGIIVIG 275 Query: 564 CFVL-------ALNR--FLWHPL 577 C L A+NR F+W L Sbjct: 276 CIGLLSDLLFKAVNRRLFVWSSL 298 >gi|239993923|ref|ZP_04714447.1| putative nitrate ABC transporter, permease protein [Alteromonas macleodii ATCC 27126] Length = 219 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 16/198 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V+V +IAS++ +PVGI G + I P QL + PLV VS + Sbjct: 12 SLYTVMVGFLIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 71 Query: 446 LNPNLWLSLLMIFGT-------QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + S + W L N G S D V+ +T + I+ Sbjct: 72 VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPFAHLTKIV 131 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 LP P TG + G W I +E+ + + GLG ++ + + G S + Sbjct: 132 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 185 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ VL + L+R + Sbjct: 186 MVAVLTIGAIGFVLDRLM 203 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 9/124 (7%) Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F + +W + + NI +DL VS+ RL+ + + +P S+P + + +S Sbjct: 87 FTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPFAHLTKIVLPSSIPMIFTGLRLS 146 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYD 256 + GW ++A+EM+ PG+G ++ + + L I+ A+LT+ + F+ D Sbjct: 147 LGIGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSESLARIMVAVLTIGAIGFVLD 200 Query: 257 QLLF 260 +L+ Sbjct: 201 RLML 204 >gi|75907097|ref|YP_321393.1| nitrate transport permease [Anabaena variabilis ATCC 29413] gi|75700822|gb|ABA20498.1| Nitrate transport permease [Anabaena variabilis ATCC 29413] Length = 283 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 16/212 (7%) Query: 363 SIGYIVNHFTYQ---DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ YI+N F YQ L + WL ++ RV++ ++ +++ IP+G IG + Sbjct: 66 NLDYILNPF-YQRGPGNLGIGWLLIASLRRVLIGFLLGAVVAIPLGFLIGMSRPAMLALN 124 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPND 478 P Q+ + P+ ++ + +P+ ++ +IF T W + N G ++ P D Sbjct: 125 PIIQIFKPVSPLAWLPIALAI--FNLADPS---AIFVIFITSLWPTIINTALGVASVPKD 179 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 + +VA + WR II P PY TG + G AW + E+ + G G Sbjct: 180 YLDVARVLEMPRWRRITKIIWPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------IG 233 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 +G ++ + + + V L V I+ L L+ Sbjct: 234 IGFFVWDEWSRLNLSSVFLAVFIIGLTGLILD 265 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 8/146 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L ++ + L SR + L PI+ I + + L +L + F NL Sbjct: 94 RVLIGFLLGAVVAIPLGFLIGMSRPAMLALNPIIQIFKPVSPLAWLPIALAIF-NL---- 148 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A+ +AIF IF + +W + + ++P+D +V+R + W++ + P S+P Sbjct: 149 ---ADPSAIFVIFITSLWPTIINTALGVASVPKDYLDVARVLEMPRWRRITKIIWPASLP 205 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216 + + +S+ W +VA EM+ G Sbjct: 206 YIFTGLRISLGIAWLVIVAVEMLTGG 231 >gi|288962947|ref|YP_003453241.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] gi|288915213|dbj|BAI76697.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] Length = 360 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 15/186 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449 ++ +++ +P+G+ G P +++ I P Q+ + PLV VS + Sbjct: 165 LLGALVAVPLGVASGLSPTVNAAINPLIQIFKPVSPLAWLPLVTMVVSATVSGGDPLFEK 224 Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 L ++ + + W L N G S+ D V ++G+ R ++LP PY Sbjct: 225 SFLTSAITVTLCSLWPTLINTAVGVSSIDRDLMNVGKVLQLSGFTMVRRLVLPSALPYIF 284 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNS--LAKIMVAVFTI 336 Query: 568 ALNRFL 573 L FL Sbjct: 337 GLIGFL 342 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I RDL V + +LSG+ L +P ++P + + +S+ GW Sbjct: 238 LWPTLINTAVGVSSIDRDLMNVGKVLQLSGFTMVRRLVLPSALPYIFTGLRLSLGVGWMV 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + L I+ A+ T+ + FL D+++ Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSNSLAKIMVAVFTIGLIGFLLDRVML 348 >gi|260777511|ref|ZP_05886405.1| nitrate ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260607177|gb|EEX33451.1| nitrate ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 322 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 13/173 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ V ++A+++ IP+GI +G + P QLL + P+V VS + Sbjct: 115 SLITVAAGFLLATLLAIPLGIMLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174 Query: 446 LNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + + L + + W L N G ++ D V+ ++ W+ R I+ Sbjct: 175 VSDDPLFAKSFINSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 234 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 LP P TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 197 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMV 256 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 257 LIAAEMLAQN------PGLGKFV 273 >gi|307130415|ref|YP_003882431.1| alkanesulfonates transport system permease [Dickeya dadantii 3937] gi|306527944|gb|ADM97874.1| Alkanesulfonates transport system permease protein [Dickeya dadantii 3937] Length = 528 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 16/195 (8%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 PR++V + L L S + R L+ + ++ L + R +L P+ Sbjct: 313 APREVVTALLAGLSSGELTSALSASLSRTLAGFALGAALGYLLGGLLGRHRVADRLLTPL 372 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L ++SI + +L +F KV+ LAA F + YQ + ++P Sbjct: 373 LSALRSIALFAWLPLLTAWFGLEESAKVVFIALAAFFPAL--------LASYQGVRHLPP 424 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E +R RLS Q+ +L +P +P L + +S+ W + +E + Sbjct: 425 SLLETARVLRLSARQRLRWLTLPAMLPALFSGLRLSLMHAWVGTIGAEYFIASGN----- 479 Query: 224 GIGSYIALAIKEQDL 238 GIGS + I+ Q L Sbjct: 480 GIGSMM---IRAQQL 491 >gi|289208148|ref|YP_003460214.1| nitrate ABC transporter inner membrane subunit [Thioalkalivibrio sp. K90mix] gi|288943779|gb|ADC71478.1| nitrate ABC transporter, inner membrane subunit [Thioalkalivibrio sp. K90mix] Length = 281 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 10/158 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV++ +A++I IP G IG P ++ PF Q+L + PL + + Sbjct: 93 SIYRVLLGFFLAALIAIPFGFVIGMSPLLNKAFDPFIQVLKPISPLAWMPLALFVIR--- 149 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + N+ ++ + W +L N G ++ ND+ VA + ++ R +ILP P Sbjct: 150 -DSNISAIFVIFICSIWPMLVNTAYGVASVRNDWLNVAKTHELSKVRTAFTVILPAAAPT 208 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +TG + G AW + +E+ G TG+G YI Sbjct: 209 ILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYI 240 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 8/124 (6%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + ++AIF IF +W M + + ++ D V+++ LS + + + +P + P ++ Sbjct: 151 SNISAIFVIFICSIWPMLVNTAYGVASVRNDWLNVAKTHELSKVRTAFTVILPAAAPTIL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI- 252 M +S+ W +VA+EM+V G GIG YI DL ++++A++ M+G+I Sbjct: 211 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYIWNQWNNLDLASVIFAIV-MIGIIG 263 Query: 253 FLYD 256 FL D Sbjct: 264 FLLD 267 >gi|304397785|ref|ZP_07379661.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] gi|304354496|gb|EFM18867.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] Length = 275 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 11/183 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ + A++I IPVGI +G P + P +L P + PL+V Sbjct: 81 AASLTRMLIALTAAAVIGIPVGILMGLSPVARGLLDPLIELYRPIPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L +S L IF + + +AG A S W+ R++ILPG Sbjct: 141 GETSKILLIS-LAIFAP---VTLSTLAGVRNTQQVRIRAARSLGANRWQLLRWVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG ++ +S + +VVL + + Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVI 249 Query: 564 CFV 566 F+ Sbjct: 250 AFI 252 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 8/153 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + RML A+ + + L S +L P++++ + IP L +L V++ Sbjct: 78 QHLAASLTRMLIALTAAAVIGIPVGILMGLSPVARGLLDPLIELYRPIPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K++ LA IFA +T S + N + +RS + WQ + Sbjct: 138 FGIGETSKILLISLA-IFA-------PVTLSTLAGVRNTQQVRIRAARSLGANRWQLLRW 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P ++P ++ + + + GW +VA+E+I Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELIAA 222 >gi|315498257|ref|YP_004087061.1| nitrate abc transporter, inner membrane subunit [Asticcacaulis excentricus CB 48] gi|315416269|gb|ADU12910.1| nitrate ABC transporter, inner membrane subunit [Asticcacaulis excentricus CB 48] Length = 302 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++++P L +L ++ P +A+F IF + +W + + + NI Sbjct: 145 PIIQVLRTVPPLAWLPISLAALREAQP--------SALFVIFITSIWPIVINTMVGVRNI 196 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V+R RL+ + F+ + +P + P + + + + W +VASEM++ G Sbjct: 197 PQDYVNVARVLRLTPGEYFFKIMLPAATPHIFTGLRIGVGMSWLAIVASEMLLGGV---- 252 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I + I+ A++ + V F+ D+L+ Sbjct: 253 --GIGFFIWDQYNSSRMSDIIVALVWVGLVGFVLDRLV 288 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A++ + +G ++G P Q+L P + P +S Sbjct: 106 WHVLTSLSRVGIGFGLAAVCGVLLGAFLGTVDWARKGTDPIIQVLRTVPPLAWLP--ISL 163 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + P+ +L +IF T W I+ N + G P D+ VA +T ++ I+L Sbjct: 164 AALREAQPS---ALFVIFITSIWPIVINTMVGVRNIPQDYVNVARVLRLTPGEYFFKIML 220 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P+ TG G +W A + SE+ G G+G +I + ++++ + Sbjct: 221 PAATPHIFTGLRIGVGMSWLAIVASEMLLGG------VGIGFFIWDQYNSSRMSDIIVAL 274 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 275 VWVGLVGFVLDRLV 288 >gi|281355617|ref|ZP_06242111.1| binding-protein-dependent transport systems inner membrane component [Victivallis vadensis ATCC BAA-548] gi|281318497|gb|EFB02517.1| binding-protein-dependent transport systems inner membrane component [Victivallis vadensis ATCC BAA-548] Length = 297 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 12/175 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A + IP GI +G + + +PF+++L A P V+ P ++ + + S+ Sbjct: 114 LALVTAIPAGIAVGSSRRLRAAAEPFSRVLGAIPPIVYIPYAIALLPSFRSA-----SIF 168 Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +I+ G W + N ++G P+ + A H+ ++ I+LPG P +TGA + Sbjct: 169 VIWSGAFWPVFVNTVSGVVTIPDSLLDSARMLHLKRSVFFFRILLPGAMPSILTGA--SL 226 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 G ++ +++ G T GLG Y+ ++ + V++G+L + V +L Sbjct: 227 GLIFSFLLLTAAELIGA----TEGLGWYVKNFSDFADYGRVIVGILFIGIVVTSL 277 >gi|146339483|ref|YP_001204531.1| nitrate transport permease (nrtB) [Bradyrhizobium sp. ORS278] gi|146192289|emb|CAL76294.1| nitrate transport permease protein (nrtB) [Bradyrhizobium sp. ORS278] Length = 289 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI ++++IP L +L ++ F + P +AIF IF + VW + + + Sbjct: 130 LDPIFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITSVWPIIINTAVGIR 181 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ +L+ + F + +P + P + + + + W +VA+EM++ G Sbjct: 182 NIPQDYRNVAAVVQLNPLEFFVKIMIPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV-- 239 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A+ + + F+ D+L+ Sbjct: 240 ----GIGFFIWDAWNSSHISEIILALFYVGIIGFVLDRLI 275 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + IA+++ + +G IG + P Q+L P + PL S ++ Sbjct: 98 SLRRVAIGYAIAAVVGVALGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPL--SLAAFRD 155 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ ++ +IF T W I+ N G P D++ VA+ + ++ I++P P Sbjct: 156 GQPS---AIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFVKIMIPAAAP 212 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E++L + + Sbjct: 213 YIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIILALFYVGI 266 Query: 565 FVLALNRFL 573 L+R + Sbjct: 267 IGFVLDRLI 275 >gi|295689454|ref|YP_003593147.1| nitrate ABC transporter inner membrane subunit [Caulobacter segnis ATCC 21756] gi|295431357|gb|ADG10529.1| nitrate ABC transporter, inner membrane subunit [Caulobacter segnis ATCC 21756] Length = 292 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F P +A+F IF + +W + + + Sbjct: 133 LDPIFQVLRTVPPLAWLPISLAAFHQAQP--------SALFVIFITAIWPIIINTAVGVR 184 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 NIP D V+R RLS + F+ + +P + P + + + + W +VASEM++ G Sbjct: 185 NIPSDYVNVARVLRLSPVEYFFKILLPATTPYIFTGLRIGIGMSWLAIVASEMLLGG 241 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 6/142 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + I+++ I +G+++G + P Q+L P + P +S +++ Sbjct: 101 SLKRVGIGFSISAVCGILLGVFVGSNRWAHRGLDPIFQVLRTVPPLAWLP--ISLAAFHQ 158 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ +L +IF T W I+ N G P+D+ VA ++ ++ I+LP P Sbjct: 159 AQPS---ALFVIFITAIWPIIINTAVGVRNIPSDYVNVARVLRLSPVEYFFKILLPATTP 215 Query: 505 YYVTGAITACGGAWNASIVSEV 526 Y TG G +W A + SE+ Sbjct: 216 YIFTGLRIGIGMSWLAIVASEM 237 >gi|50084690|ref|YP_046200.1| ABC transporter permease [Acinetobacter sp. ADP1] gi|49530666|emb|CAG68378.1| putative permease protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 262 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 88/186 (47%), Gaps = 16/186 (8%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 + +L A S+ L ++ P+ + ++ +P+LG ++F N E A IF I Sbjct: 88 LILGSLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGN--------GEEAKIFIIA 139 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + + YQ L + +E++R ++ S W+KF + +P ++P ++ + +++ Sbjct: 140 LASFFPLVINTYQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAIPFT 199 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAI--KEQDLLAILYAMLTMLGVIFLYD-QLLF 260 W ASE++ G+G+ + A E D+L + +T+ G L+ Sbjct: 200 WITTTASELLFNAGA-----GLGNLMMKAEINAEMDILLVCAITVTLCGAFMTASIHLIS 254 Query: 261 RPMIVW 266 + +++W Sbjct: 255 KRLLLW 260 >gi|154246559|ref|YP_001417517.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160644|gb|ABS67860.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 279 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + ++A ++ +P+G IG P + PF Q+L + PL + Y Sbjct: 91 SIGRVALGYVLAVLVAVPIGFLIGMSPLAYRALDPFIQVLKPISPLAWMPL-----ALYT 145 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++ +IF + W +L N G A ++ VA + + WR +ILP P Sbjct: 146 IKDSALSAIFVIFICSVWPMLLNTAFGVGAVRKEWLNVARTLEVGPWRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V++G+L + Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIANVIVGILFIGV 259 Query: 565 FVLALNRFL 573 + L+ L Sbjct: 260 VGMVLDLIL 268 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 47/86 (54%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+AIF IF VW M + + + ++ V+R+ + W++ + + +P + P ++ Sbjct: 149 SALSAIFVIFICSVWPMLLNTAFGVGAVRKEWLNVARTLEVGPWRRAFTVILPAAAPTIL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTV 219 M +S+ W +VA+EM+V G + Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGTGI 234 >gi|330501505|ref|YP_004378374.1| putative nitrate transport system permease [Pseudomonas mendocina NK-01] gi|328915791|gb|AEB56622.1| possible nitrate transport system permease protein [Pseudomonas mendocina NK-01] Length = 278 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 7/127 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ +AIF IF VW M + + + RD V+R+ LS + + + VP +MP ++ Sbjct: 148 SQTSAIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVIVPAAMPTIL 207 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG Y+ +L ++++++L M+GV+ Sbjct: 208 TGMRISVGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLNLASVIFSIL-MIGVVG 260 Query: 254 LYDQLLF 260 + LL Sbjct: 261 MLLDLLL 267 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ ++A+++ IP+G IG P + + PF Q+L + PL + + Sbjct: 90 SLYRVLTGYLLAALVAIPIGFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIKDSQ 149 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + ++ R +I+P P Sbjct: 150 TS-----AIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVIVPAAMP 204 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G Y+ + V+ +L++ Sbjct: 205 TILTGMRISVGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLNLASVIFSILMIGV 258 Query: 565 FVLALNRFL 573 + L+ L Sbjct: 259 VGMLLDLLL 267 >gi|254441535|ref|ZP_05055028.1| nitrate ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198251613|gb|EDY75928.1| nitrate ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 276 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 8/127 (6%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E +AIF IF +W M + + + D V+R+ LS ++ + + +P + P +V Sbjct: 146 SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELSAFKTAFTVILPAAAPTIV 205 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI- 252 M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+GV+ Sbjct: 206 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGVVG 258 Query: 253 FLYDQLL 259 L D L Sbjct: 259 MLLDSAL 265 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ +A++I IP+G IG + PF Q+L + PL + + Sbjct: 88 SIYRVLTGYFMAALIAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFVIQDSE 147 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + ++ ++ +ILP P Sbjct: 148 AS-----AIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELSAFKTAFTVILPAAAP 202 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 VTG + G AW + +E+ G TG+G Y+ V+ +L++ Sbjct: 203 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLDLTSVIFSILMIGV 256 Query: 565 FVLALNRFL 573 + L+ L Sbjct: 257 VGMLLDSAL 265 >gi|166032562|ref|ZP_02235391.1| hypothetical protein DORFOR_02277 [Dorea formicigenerans ATCC 27755] gi|166026919|gb|EDR45676.1| hypothetical protein DORFOR_02277 [Dorea formicigenerans ATCC 27755] Length = 220 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +YV+ ITM RV+ + A II +P+G+ +G+ P I + PF L P + PL Sbjct: 79 MYVLRNLGITMRRVMTGALYAFIIGLPLGMIMGYSPKILRALSPFMNSLRQVPIMAWVPL 138 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + P ++ L+ F + I+ N I+G DF A S + Sbjct: 139 AIVWFGIGD-GPTIF---LIAFSGVFTIILNTISGVQDISKDFYNAARSMGANTLNIIKD 194 Query: 497 IILPGIFPYYVTGAITACGGAW 518 I+LPG P +TG A G W Sbjct: 195 IVLPGSLPGVMTGVRLAIGLGW 216 >gi|148254269|ref|YP_001238854.1| nitrate transport permease NrtB [Bradyrhizobium sp. BTAi1] gi|146406442|gb|ABQ34948.1| nitrate transport permease protein (nrtB) [Bradyrhizobium sp. BTAi1] Length = 304 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI ++++IP L +L ++ F + P +AIF IF + VW + + + Sbjct: 145 LDPIFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITSVWPIIINTAVGIR 196 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ +L+ + F + +P + P + + + + W +VA+EM++ G Sbjct: 197 NIPQDYRNVAAVVQLNPLEFFAKIMIPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV-- 254 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A+ + + F+ D+L+ Sbjct: 255 ----GIGFFIWDAWNSSHISEIVLALFYVGIIGFVLDRLI 290 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + IA+I+ + VG IG + P Q+L P + PL S ++ Sbjct: 113 SLRRVAIGYAIAAIVGVAVGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPL--SLAAFRD 170 Query: 446 LNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P+ ++ +IF T W I+ N G P D++ VA+ + ++ I++P P Sbjct: 171 GQPS---AIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFAKIMIPAAAP 227 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G +W A + +E+ G G+G +I ++ E+VL + + Sbjct: 228 YIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIVLALFYVGI 281 Query: 565 FVLALNRFL 573 L+R + Sbjct: 282 IGFVLDRLI 290 >gi|282921823|ref|ZP_06329522.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A9765] gi|282593877|gb|EFB98867.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A9765] Length = 253 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 GSLS----AIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|323700263|ref|ZP_08112175.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. ND132] gi|323460195|gb|EGB16060.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans ND132] Length = 257 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 25/188 (13%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQV 147 L A SRR ++ P+++ + +P++ + T++YF G A FAI F Sbjct: 87 LIATSRRASHMVAPVMEFARYLPVVALVPLTLLYF---------GIGDAQKFAIIFLGTF 137 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + + S+ +P DL + + + Q + + P ++PG++ ++ +++ W ++ Sbjct: 138 FQLVLMVADSVATVPADLSRAAATLGANRLQTYRLVLFPGALPGIMDDLRITVGWAWTYL 197 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI--LYAMLTMLGVIFLYDQLLF----R 261 V +E++ G+G I ++ Q LAI ++A L ++GV+ L LF R Sbjct: 198 VVAELVAANS------GLGYMI---LRAQRFLAIDRIFAGLIIIGVLGLLTDYLFKLLTR 248 Query: 262 PMIVWSNK 269 + WS K Sbjct: 249 IITPWSEK 256 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 36/182 (19%), Positives = 77/182 (42%), Gaps = 10/182 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+V +A++I +P+G+ I S + P + P PL + Y+ Sbjct: 66 SVYRVMVGWSLAAVIAVPLGLLIATSRRASHMVAPVMEFARYLPVVALVPL---TLLYFG 122 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + +++ + GT + ++ V + P D A++ + +R ++ PG P Sbjct: 123 IGDAQKFAIIFL-GTFFQLVLMVADSVATVPADLSRAAATLGANRLQTYRLVLFPGALPG 181 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G AW +V+E+ + +GLG I + + + G++I+ Sbjct: 182 IMDDLRITVGWAWTYLVVAELVA------ANSGLGYMILRAQRFLAIDRIFAGLIIIGVL 235 Query: 566 VL 567 L Sbjct: 236 GL 237 >gi|254418147|ref|ZP_05031871.1| ABC transporter, permease protein [Brevundimonas sp. BAL3] gi|196184324|gb|EDX79300.1| ABC transporter, permease protein [Brevundimonas sp. BAL3] Length = 365 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 15/229 (6%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G+ G V F Y I ++F V +A+++ +P+G+ G ++ Sbjct: 133 GLEAAGRGGEVRDFRYAGSPSFIDQIFTSLFTVAFGFGLATVVAVPLGLVCGLSKGFNAA 192 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-------SLLMIFGTQWYILFNVIA 470 P Q+ + P+V VS P+ L +++++ + W L N Sbjct: 193 FNPLVQIFKPISPLAWLPIVTMVVSATMTRPDPALPKSFVISAVVVMLCSLWPTLINTAV 252 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 GA++ D V ++ + R +ILP PY TG + G W I +E+ + Sbjct: 253 GAASIDRDLLNVGRVLRLSPFARLRRLILPSALPYIFTGMRLSLGVGWMVLIAAEMLA-- 310 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579 + GLG ++ + + GS E L ++ V+ L FL L + Sbjct: 311 ----QNPGLGKFVWDEFQNGS--EQSLARIMFAVIVIGLIGFLLDRLMM 353 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 9/118 (7%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + +I RDL V R RLS + + L +P ++P + M +S+ GW Sbjct: 242 SLWPTLINTAVGAASIDRDLLNVGRVLRLSPFARLRRLILPSALPYIFTGMRLSLGVGWM 301 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + EQ L I++A++ + + FL D+L+ Sbjct: 302 VLIAAEMLAQN------PGLGKFVWDEFQNGSEQSLARIMFAVIVIGLIGFLLDRLMM 353 >gi|82749885|ref|YP_415626.1| ABC transporter permease [Staphylococcus aureus RF122] gi|82655416|emb|CAI79802.1| probable ABC transporter permease [Staphylococcus aureus RF122] Length = 253 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V I+A ++ IP+G +G + + I+P QL+ + P VV + Sbjct: 61 AISLWRFVAGFIVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVL---W 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ +L ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 118 FGID-SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWPLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|270261496|ref|ZP_06189769.1| transporter [Serratia odorifera 4Rx13] gi|270044980|gb|EFA18071.1| transporter [Serratia odorifera 4Rx13] Length = 287 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 12/181 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+FRV+ ++A+ I +P+GI +G + + ++PF PA+ F PL++ Sbjct: 95 MTVFRVLSGFLLAAAIAVPLGIMMGSYKLVEAFLEPFVSFCRYLPASAFVPLLILWAGIG 154 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+IF G+ + I+ V A D E A + + R +++PG Sbjct: 155 EMQ-----KILVIFIGSFFQIVLMVAVTVGAARRDLVEAAYTLGASNRSVVRRVLIPGAA 209 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 210 PEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVDSQALLNTGQIIFGIIVIG 263 Query: 564 C 564 C Sbjct: 264 C 264 >gi|27377915|ref|NP_769444.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351061|dbj|BAC48069.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 298 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ ++++IP L +L ++ F + P +AIF IF + +W + + + Sbjct: 139 LDPLFQVLRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIR 190 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ +L+ + F + +P + P + + + + W +VA+EM++ G Sbjct: 191 NIPQDYRNVAAVVQLNPLEFFGKIMIPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV-- 248 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V F+ D+L+ Sbjct: 249 ----GIGFFIWDAWNSSHISEIILALIYVGIVGFVLDRLI 284 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +++I I +G+ +G + P Q+L P + PL S Sbjct: 102 WHLSASLQRVAFGYSLSAIAGIALGVLVGQSVWAMRGLDPLFQVLRTIPPLAWLPL--SL 159 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ P+ ++ +IF T W I+ N G P D++ VA+ + ++ I++ Sbjct: 160 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFGKIMI 216 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ E++L + Sbjct: 217 PAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIILAL 270 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 271 IYVGIVGFVLDRLI 284 >gi|299134441|ref|ZP_07027634.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] gi|298591188|gb|EFI51390.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] Length = 257 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 10/174 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV + +++++I +P+G+ IG+ I P ++L PA + PL + P Sbjct: 63 RVFIAFVLSTVIGVPLGLIIGWSRTAREYIFPVLEMLRPIPALAWVPLAILMFKSSE-GP 121 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++L+ L F + N + G + + A + W+ +R+I++PG P+ T Sbjct: 122 VIFLTFLPAF---FATTLNSMLGVHSIDESYFRAADCLGASRWQVFRHIVVPGSLPFVFT 178 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G + G AW + + E+ + + GLG I S S+P +V+G++ + Sbjct: 179 GLEISIGLAWFSLVAGEMIAGEY------GLGYVIYTSYTMVSYPTIVIGMITL 226 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ A V+S + + SR + P+L++++ IP L ++ ++ F + Sbjct: 63 RVFIAFVLSTVIGVPLGLIIGWSRTAREYIFPVLEMLRPIPALAWVPLAILMFKS----- 117 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +E IF F + T + + +I + S WQ F ++ VP S+P Sbjct: 118 ---SEGPVIFLTFLPAFFATTLNSMLGVHSIDESYFRAADCLGASRWQVFRHIVVPGSLP 174 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + + +S+ WF +VA EMI Sbjct: 175 FVFTGLEISIGLAWFSLVAGEMI 197 >gi|90021910|ref|YP_527737.1| 2-isopropylmalate synthase [Saccharophagus degradans 2-40] gi|89951510|gb|ABD81525.1| binding-protein-dependent transport systems inner membrane component [Saccharophagus degradans 2-40] Length = 337 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 19/202 (9%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-YYHLNPNLWLS 453 ++A+I+ +P+GI+ G P +SS P QL + P+V VS Y + + W + Sbjct: 141 LLATIVAVPLGIFCGLSPTVSSAFNPIIQLFKPVSPLAWLPIVTMIVSATYVTSDDSWFT 200 Query: 454 -------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + + + W L N G ++ D V + + ++LP P Sbjct: 201 KSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVGKVLQLGWFTKITKLVLPSSLPLI 260 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMC 563 TG + G W I +E+ S + GLG ++ + + G S ++++ VL + Sbjct: 261 FTGLRLSLGVGWMVLIAAEMLS------QNPGLGKFVWDEFQNGSSNSLSKIMVAVLTIG 314 Query: 564 CFVLALNR--FLWHPLYLYGTR 583 L+R F L+ +G + Sbjct: 315 VIGFLLDRVMFTLQNLFTFGEK 336 Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL V + +L + K L +P S+P + + +S+ GW Sbjct: 215 LWPTLINTALGVASIDKDLMNVGKVLQLGWFTKITKLVLPSSLPLIFTGLRLSLGVGWMV 274 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + L I+ A+LT+ + FL D+++F Sbjct: 275 LIAAEMLSQN------PGLGKFVWDEFQNGSSNSLSKIMVAVLTIGVIGFLLDRVMF 325 >gi|323463373|gb|ADX75526.1| ABC transporter, permease protein [Staphylococcus pseudintermedius ED99] Length = 254 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 10/187 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++R +V +IA ++ IP+GI +G + I+P Q + + P +V Sbjct: 62 ISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPFIVLWFGI- 120 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +L ++ + I+FN I G N + ++A + ++ GW +R II PG F Sbjct: 121 ---GSLPAIFIIFIAAFFPIIFNTIKGVRTIDNHYLKIADNLNLHGWSLYRDIIFPGAFK 177 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + ++G A G +W + E+ +GLG I +S + +V+ + + Sbjct: 178 HIMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVLSSIFFIGI 231 Query: 565 FVLALNR 571 F ++R Sbjct: 232 FGFLIDR 238 >gi|261250974|ref|ZP_05943548.1| nitrate ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260937847|gb|EEX93835.1| nitrate ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 322 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A+ I IP+GI +G + P QLL + P+V VS Y +P Sbjct: 124 LLATAIAIPLGIVLGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 183 Query: 453 S-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 184 SFVNSLLTVALCSLWPTLINTAVGVTSVDKDLVNVSRVLQLSWWQHIRVIVLPSAIPMIF 243 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 244 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VSR +LS WQ + +P ++P + + +S+ W Sbjct: 197 LWPTLINTAVGVTSVDKDLVNVSRVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMV 256 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 257 LIAAEMLAQN------PGLGKFV 273 >gi|56750321|ref|YP_171022.1| nitrate/nitrite ABC transporter permease [Synechococcus elongatus PCC 6301] gi|81300047|ref|YP_400255.1| nitrate transport permease [Synechococcus elongatus PCC 7942] gi|585581|sp|P38044|NRTB_SYNE7 RecName: Full=Nitrate transport permease protein nrtB gi|48970|emb|CAA43810.1| nitrate transporter [Synechococcus elongatus PCC 7942] gi|56685280|dbj|BAD78502.1| ABC-type nitrate/nitrite transport system permease protein [Synechococcus elongatus PCC 6301] gi|81168928|gb|ABB57268.1| nitrate transport permease [Synechococcus elongatus PCC 7942] gi|445046|prf||1908370A nitrate transporter Length = 279 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 15/193 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV + ++A+ I VG +G + + P Q+L P +FP +S + + Sbjct: 86 ISLQRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFP--ISLMVFQ 143 Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 N + ++ +IF T W I+ N G + P+D+ VA ++ + I++P Sbjct: 144 DANTS---AIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNILIPSTV 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE---KGSFPEVVLGVL 560 PY G A G AW A + +E+ G+G +I ++ GS +++L + Sbjct: 201 PYVFAGLRIAVGLAWLAIVAAEMLK------ADGGIGYFIWDAYNAGGDGSSSQIILAIF 254 Query: 561 IMCCFVLALNRFL 573 + L+L+R + Sbjct: 255 YVGLVGLSLDRLV 267 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 8/121 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S+ LG L P++ +++++P L + +++ F + A +AIF IF + +W + Sbjct: 112 SKFLGKGLDPVIQVLRTVPPLAWFPISLMVFQD--------ANTSAIFVIFITAIWPIII 163 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + IP D V+R +LS + +P ++P + + +++ W +VA+EM Sbjct: 164 NTAVGINQIPDDYNNVARVLKLSKKDYILNILIPSTVPYVFAGLRIAVGLAWLAIVAAEM 223 Query: 213 I 213 + Sbjct: 224 L 224 >gi|237808527|ref|YP_002892967.1| binding-protein-dependent transport systems inner membrane component [Tolumonas auensis DSM 9187] gi|237500788|gb|ACQ93381.1| binding-protein-dependent transport systems inner membrane component [Tolumonas auensis DSM 9187] Length = 312 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 13/175 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442 ++ V ++AS+I IP+GI +G + + P Q+L + PLV VS Sbjct: 103 TTSLITVATGFLVASLIAIPMGIILGLNQWMYQALNPVIQILKPISPLAWLPLVTMVVSA 162 Query: 443 -YYHLNPNLWLSLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 Y NP + S + + + W L N G + D K V+ + R Sbjct: 163 VYSSDNPLVAKSFINSAFTVTLCSLWPTLLNTTVGVANIDPDLKNVSRVLKLDPLTHVRK 222 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 I+LP P TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 223 IVLPSAIPMIFTGLRLSLGVAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 271 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 12/168 (7%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQ 156 L P++ I++ I L +L + +Y V + + + F + +W + Sbjct: 137 LNPVIQILKPISPLAWLPLVTMVVSAVYSSDNPLVAKSFINSAFTVTLCSLWPTLLNTTV 196 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + NI DL+ VSR +L + +P ++P + + +S+ W ++A+EM+ Sbjct: 197 GVANIDPDLKNVSRVLKLDPLTHVRKIVLPSAIPMIFTGLRLSLGVAWMVLIAAEMLAQN 256 Query: 217 DTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLFR 261 PG+G ++ + Q L I+ A++T+ + F+ D+ + + Sbjct: 257 ------PGLGKFVWDEFQNGSAQSLARIMVAVVTIGIIGFMLDRGMLQ 298 >gi|308183780|ref|YP_003927912.1| glycine/betaine/carnitine ABC transporter, membrane-spanning subunit [Lactobacillus plantarum subsp. plantarum ST-III] gi|308047706|gb|ADO00249.1| glycine/betaine/carnitine ABC transporter, membrane-spanning subunit [Lactobacillus plantarum subsp. plantarum ST-III] Length = 279 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 ++T +LS+ +I+++ AKS R +V+ PILD MQ++P +L V +F Sbjct: 93 TQTLTLVLSSSLIAIVVGIPLGIWMAKSSRAEIVIKPILDFMQTLPAFVYLIPAVSFF-- 150 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G V G + IFA T MT + +P DL EV+ SF + WQK L + Sbjct: 151 -GIGMVPGVLASVIFA--TPPTVRMT---NLGIRQVPSDLIEVADSFGSTSWQKLIKLQL 204 Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 P + M G+ MM+ +S M+V+ + L G+G+ + A+ D Sbjct: 205 PLAKTTIMSGINQTMMLGLS----------MVVIASMIGAL-GLGTQVYFAVGRND 249 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 8/108 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWL 452 +IA ++ IP+GIW+ I+P + PA V+ + VS++ + P + Sbjct: 104 LIAIVVGIPLGIWMAKSSRAEIVIKPILDFMQTLPAFVYL---IPAVSFFGIGMVPGVLA 160 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 S+ IF T + + G P+D EVA SF T W+ + LP Sbjct: 161 SV--IFATPPTVRMTNL-GIRQVPSDLIEVADSFGSTSWQKLIKLQLP 205 >gi|109898731|ref|YP_661986.1| binding-protein-dependent transport systems inner membrane component [Pseudoalteromonas atlantica T6c] gi|109701012|gb|ABG40932.1| binding-protein-dependent transport systems inner membrane component [Pseudoalteromonas atlantica T6c] Length = 329 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 16/198 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V V +IAS+I +P+GI G + I P QLL + PLV VS + Sbjct: 122 SLYTVTVGFLIASVIAVPLGILCGLSKASYAAINPLIQLLKPVSPLAWLPLVTMVVSAVY 181 Query: 446 LNPNLWLSLLMIFGTQ-------WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + S I W L N G S+ +D V+ + + I+ Sbjct: 182 ISDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLINVSKVLRLGPFSHVMKIV 241 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 +P P TG + G W I +E+ + + GLG ++ + + G S + Sbjct: 242 MPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 295 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ VL + AL+R + Sbjct: 296 MVAVLTIGLIGFALDRLM 313 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I DL VS+ RL + + +P S+P + + +S+ GW Sbjct: 204 LWPTLINTAVGVSSIDSDLINVSKVLRLGPFSHVMKIVMPSSIPMIFTGLRLSLGIGWMV 263 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQ--LLFR 261 ++A+EM+ PG+G ++ + + L I+ A+LT+ + F D+ LL + Sbjct: 264 LIAAEMLAQN------PGLGKFVWDEFQNGSSESLARIMVAVLTIGLIGFALDRLMLLLQ 317 Query: 262 PMIVWSN 268 + W Sbjct: 318 KQVSWDK 324 >gi|163853891|ref|YP_001641934.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|163665496|gb|ABY32863.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] Length = 285 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 14/173 (8%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 TL +S L PI I+++IP L +L ++ F + P +AIF IF + Sbjct: 113 GTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITS 164 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + + NIP+D V+ RL+ + F + +P + P + + + + W Sbjct: 165 IWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWLA 224 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +VA+EM++ G GIG +I A + I+ A++ + + F+ D+++ Sbjct: 225 IVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRMV 271 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A + + +G +G + P Q+L P + PL S Sbjct: 89 WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPL--SL 146 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ P+ ++ +IF T W I+ N G P D++ VA+ + ++ I+L Sbjct: 147 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIML 203 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ E+++ + Sbjct: 204 PSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVAL 257 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 258 VYVGLIGFVLDRMV 271 >gi|320160159|ref|YP_004173383.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319994012|dbj|BAJ62783.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 272 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 22/196 (11%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 ++P++ T ++ + + + V L AKS L +L P L Q+IP++ Sbjct: 70 TIPRHFFATLQEVVPGLFLGSVSASVLGYLIAKSSLLERLLSPYLVASQAIPVVAIAPLL 129 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F K++ L F + + V L +P+ L ++ RS R WQ Sbjct: 130 IIWFGPGITSKILICALVVFFPVLVNTV--------VGLRAVPQSLHDLMRSLRAHPWQI 181 Query: 180 FWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 WYL +P +MP GL +S+ G VVG+ V G+G I +A + Sbjct: 182 VWYLEIPAAMPIFLGGLRVGATLSVIGA----------VVGEFVGADRGLGFLINVARGQ 231 Query: 236 QDLLAILYAMLTMLGV 251 D + A+LT++G+ Sbjct: 232 YDHPLVFAAVLTLVGM 247 >gi|257062962|ref|YP_003142634.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Slackia heliotrinireducens DSM 20476] gi|256790615|gb|ACV21285.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Slackia heliotrinireducens DSM 20476] Length = 244 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 10/181 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++++RVV+ ++I +++ IP+G+ G P + + P L P V P+ + + Sbjct: 53 VSLYRVVIAMVIGTVLAIPLGLVCGRSPRVDAVFAPVLYFLYPLPKVVLLPVFIVLLGLA 112 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P + L L IF + +L V + P D S + +R++I+P P Sbjct: 113 D-APKIALIALTIF---FQVLVTVRDATKSVPEDSVLSVRSLGASRLDIYRHVIVPATLP 168 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 T + G A +E S+ +TGLG +IA++ ++P++ G++ M Sbjct: 169 ELFTAQRISSGTAVAILFFAE--SFAG----STGLGYFIADAWALLNYPKMFAGIIAMAV 222 Query: 565 F 565 Sbjct: 223 L 223 >gi|296120166|ref|ZP_06838719.1| nitrate ABC transporter, permease protein NrtB [Corynebacterium ammoniagenes DSM 20306] gi|295966858|gb|EFG80130.1| nitrate ABC transporter, permease protein NrtB [Corynebacterium ammoniagenes DSM 20306] Length = 260 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 18/179 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 R L L A VI+L F+ +S L + P++ I++ + L +L + + Sbjct: 76 RVLLGFLLAAVIALPVGFILG----RSTTLRWAVDPVVQILRPVSPLAWLPLGLALLKD- 130 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 AE A+F I S +W + + ++ ++ ++ + + W + Y+ +P Sbjct: 131 -------AENTAVFVILLSALWPILINTIDAVRSVNPTYINLADTIGTNWWSRIIYIWLP 183 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 S+PG++ + +S+S W +VA+EM++ G G+G ++ A D+ AI+ A+ Sbjct: 184 ASLPGIITGLRLSLSTAWLVIVAAEMLIGGR------GVGFFVWNAWNRLDIDAIVVAI 236 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 19/207 (9%) Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 YQD + + W ++ RV++ ++A++I +PVG +G + + P Q+L Sbjct: 57 YQDGPASVGIFWHLLASLRRVLLGFLLAAVIALPVGFILGRSTTLRWAVDPVVQILRPVS 116 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + PL ++ + N +++ LL W IL N I + + +A + Sbjct: 117 PLAWLPLGLALLKDAE-NTAVFVILL---SALWPILINTIDAVRSVNPTYINLADTI--- 169 Query: 490 GWRWWR---YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 G WW YI LP P +TG + AW + +E+ G G+G ++ + Sbjct: 170 GTNWWSRIIYIWLPASLPGIITGLRLSLSTAWLVIVAAEMLIGGR------GVGFFVWNA 223 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +V+ + I+ L L+ + Sbjct: 224 WNRLDIDAIVVAIFIIGIAGLVLDHLV 250 >gi|254295130|ref|YP_003061153.1| binding-protein-dependent transporters inner membrane component [Hirschia baltica ATCC 49814] gi|254043661|gb|ACT60456.1| binding-protein-dependent transport systems inner membrane component [Hirschia baltica ATCC 49814] Length = 370 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 15/188 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLS 453 I+A++I P+GI +G P +S+ P Q+ + P+V VS + N+ S Sbjct: 176 ILATVIAAPLGIIMGMSPAMSAAFNPIIQIFKPVSPLAWLPIVTMVVSATVATDGNMSKS 235 Query: 454 LL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L + + W L N G ++ D V + W ++LP P T Sbjct: 236 FLTSAITVTLCSLWPTLINTAVGVASIDKDLVNVGKVLKLDAWTKVTKLVLPSALPLIFT 295 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCF 565 G + G W I +E+ + + GLG ++ + + G S ++++ VL + Sbjct: 296 GMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGII 349 Query: 566 VLALNRFL 573 L+RF+ Sbjct: 350 GFILDRFM 357 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 19/194 (9%) Query: 79 SLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFT--VVYFMNLYP 128 ++ F F+ AT+ A S + PI+ I + + L +L VV Sbjct: 170 TVFFGFILATVIAAPLGIIMGMSPAMSAAFNPIIQIFKPVSPLAWLPIVTMVVSATVATD 229 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + + L + + +W + + +I +DL V + +L W K L +P + Sbjct: 230 GNMSKSFLTSAITVTLCSLWPTLINTAVGVASIDKDLVNVGKVLKLDAWTKVTKLVLPSA 289 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245 +P + M +S+ GW ++A+EM+ PG+G ++ + Q L I+ A+ Sbjct: 290 LPLIFTGMRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMVAV 343 Query: 246 LTMLGVIFLYDQLL 259 LT+ + F+ D+ + Sbjct: 344 LTIGIIGFILDRFM 357 >gi|240141347|ref|YP_002965827.1| Nitrate transport permease protein [Methylobacterium extorquens AM1] gi|254563853|ref|YP_003070948.1| ni=trate transport permease [Methylobacterium extorquens DM4] gi|240011324|gb|ACS42550.1| Nitrate transport permease protein [Methylobacterium extorquens AM1] gi|254271131|emb|CAX27138.1| Nitrate transport permease protein [Methylobacterium extorquens DM4] Length = 286 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 14/173 (8%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 TL +S L PI I+++IP L +L ++ F + P +AIF IF + Sbjct: 114 GTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITS 165 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + + NIP+D V+ RL+ + F + +P + P + + + + W Sbjct: 166 IWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWLA 225 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +VA+EM++ G GIG +I A + I+ A++ + + F+ D+++ Sbjct: 226 IVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRMV 272 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A + + +G +G + P Q+L P + PL S Sbjct: 90 WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPL--SL 147 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ P+ ++ +IF T W I+ N G P D++ VA+ + ++ I+L Sbjct: 148 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIML 204 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ E+++ + Sbjct: 205 PSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVAL 258 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 259 VYVGLIGFVLDRMV 272 >gi|167761565|ref|ZP_02433692.1| hypothetical protein CLOSCI_03976 [Clostridium scindens ATCC 35704] gi|167661231|gb|EDS05361.1| hypothetical protein CLOSCI_03976 [Clostridium scindens ATCC 35704] Length = 219 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 5/152 (3%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 F+ D LYV+ ITM RV+ + A II P+G+ +G+ P I + PF L P Sbjct: 73 FSLTD-LYVLRNLGITMRRVLTGSLYAFIIGFPLGMLMGYSPQILKALSPFMNSLRQVPI 131 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + P ++ L+ F + I+ N I+G D+ A S + Sbjct: 132 MAWVPLAIVWFGIGD-GPTIF---LIAFSGIFTIILNTISGVQDISKDYYHAARSMGAST 187 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + + ++LPG P +TG A G W + I Sbjct: 188 FGVIKDVVLPGSLPGVLTGLRLAVGLGWMSVI 219 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/141 (21%), Positives = 67/141 (47%), Gaps = 8/141 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L+ + + + F L S ++ L P ++ ++ +PI+ ++ +V+F Sbjct: 87 TMRRVLTGSLYAFIIGFPLGMLMGYSPQILKALSPFMNSLRQVPIMAWVPLAIVWFG--- 143 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG + IF I S ++ + + + +I +D +RS S + + +P Sbjct: 144 ----IG-DGPTIFLIAFSGIFTIILNTISGVQDISKDYYHAARSMGASTFGVIKDVVLPG 198 Query: 188 SMPGLVWNMMMSMSGGWFFVV 208 S+PG++ + +++ GW V+ Sbjct: 199 SLPGVLTGLRLAVGLGWMSVI 219 >gi|332306314|ref|YP_004434165.1| binding-protein-dependent transport systems inner membrane component [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173643|gb|AEE22897.1| binding-protein-dependent transport systems inner membrane component [Glaciecola agarilytica 4H-3-7+YE-5] Length = 329 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 16/198 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V V +IAS+I +P+GI G + I P QLL + PLV VS + Sbjct: 122 SLYTVTVGFLIASVIAVPLGIICGLSKASYAAINPLIQLLKPVSPLAWLPLVTMVVSAVY 181 Query: 446 LNPNLWLSLLMIFGT-------QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + S I W L N G S+ +D V+ + + I+ Sbjct: 182 VSDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLLNVSKVLRLGPFSHVMKIV 241 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 +P P TG + G W I +E+ + + GLG ++ + + G S + Sbjct: 242 MPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 295 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ VL + AL+R + Sbjct: 296 MVAVLTIGLIGFALDRLM 313 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I DL VS+ RL + + +P S+P + + +S+ GW Sbjct: 204 LWPTLINTAVGVSSIDSDLLNVSKVLRLGPFSHVMKIVMPSSIPMIFTGLRLSLGIGWMV 263 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQ--LLFR 261 ++A+EM+ PG+G ++ + + L I+ A+LT+ + F D+ LL + Sbjct: 264 LIAAEMLAQN------PGLGKFVWDEFQNGSSESLARIMVAVLTIGLIGFALDRLMLLLQ 317 Query: 262 PMIVWSN 268 + W Sbjct: 318 KQVSWDK 324 >gi|218532835|ref|YP_002423651.1| nitrate ABC transporter inner membrane subunit [Methylobacterium chloromethanicum CM4] gi|218525138|gb|ACK85723.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium chloromethanicum CM4] Length = 285 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 14/173 (8%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 TL +S L PI I+++IP L +L ++ F + P +AIF IF + Sbjct: 113 GTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAAFRDGQP--------SAIFVIFITS 164 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + + NIP+D V+ RL+ + F + +P + P + + + + W Sbjct: 165 IWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWLA 224 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +VA+EM++ G GIG +I A + I+ A++ + + F+ D+++ Sbjct: 225 IVAAEMLIGGV------GIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRMV 271 Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A + + +G +G + P Q+L P + PL S Sbjct: 89 WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPL--SL 146 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ P+ ++ +IF T W I+ N G P D++ VA+ + ++ I+L Sbjct: 147 AAFRDGQPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIML 203 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ E+++ + Sbjct: 204 PSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVAL 257 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 258 VYVGLIGFVLDRMV 271 >gi|298693438|gb|ADI96660.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED133] gi|323440153|gb|EGA97867.1| ABC transporter permease [Staphylococcus aureus O11] gi|323443616|gb|EGB01230.1| ABC transporter permease [Staphylococcus aureus O46] Length = 253 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVAGFVVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLYLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|62183746|gb|AAX73264.1| transmembrane protein [Methanohalophilus portucalensis FDF-1] Length = 276 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 25/181 (13%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 +Y+ T ++S+ ++L+ LAAKS L +L PILD+MQ++P +L V++ Sbjct: 89 EYSMETIALVISSAALALIIGIPLGILAAKSETLHRILRPILDLMQTMPSFVYLIPAVIF 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + PG + A + + T + Q +P++L EV+ +F + WQK Sbjct: 149 FGLGNVPGMI-----ATVVFSMPPAIRLTTLGITQ----VPKELVEVADAFGSTSWQKLI 199 Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P + M G+ +M+++S M+V+ ++I G+G + + I+ D Sbjct: 200 KVEIPVALKTIMAGVNQCIMLALS----------MVVIA-SMIGARGLGYQVLIGIQRVD 248 Query: 238 L 238 + Sbjct: 249 I 249 >gi|188580473|ref|YP_001923918.1| ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179343971|gb|ACB79383.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium populi BJ001] Length = 273 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RVVV ++ + + +P+G+++G I I P Q+L P + PL + ++ Sbjct: 80 SLYRVVVGFLVGAGLALPLGLFMGTSDVIYRHINPLMQVLRPIPPIAYIPL---SILWFG 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L N L+ G + +L N IAG + A S + +R +ILP PY Sbjct: 137 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPY 195 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 ++GA G A+ IV+E+ + GLG I E+ E +++ G+L + Sbjct: 196 ILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMLTIGAL 249 Query: 566 VLALN 570 L ++ Sbjct: 250 GLIID 254 >gi|296446867|ref|ZP_06888804.1| binding-protein-dependent transport systems inner membrane component [Methylosinus trichosporium OB3b] gi|296255638|gb|EFH02728.1| binding-protein-dependent transport systems inner membrane component [Methylosinus trichosporium OB3b] Length = 247 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 I I++ IP L ++ F +++F E AA+F I W + FS + ++ N+ Sbjct: 93 ITRILRPIPGLAWIPFAILWFGV--------EEKAAVFIIAIGVFWIVYFSAHGAIRNVD 144 Query: 163 RDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 RDL EV+ +F + W+K + P S+PG++ + S+ W VVA+E+ Sbjct: 145 RDLVEVAAAFGFRTSWEKLVKVQFPASLPGILVGVRTSLGQAWMAVVAAEL 195 >gi|91777773|ref|YP_552981.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91690433|gb|ABE33631.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 269 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 35/267 (13%) Query: 327 FPENFLQLC-----SNQRVSYMLDIF---WFCVVCGVAI------GIAWQSIGYIVNHFT 372 FP F +L + QR+S +L IF W+ V G W ++ ++ T Sbjct: 11 FPARFGRLTRFARVAGQRLS-LLAIFLILWWVAAQRVPAFILPGPGKTWNALLDLIATGT 69 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + L IT++RVV ++A+++ P+GI +G + S +P ++ A + Sbjct: 70 FAEDL------GITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAI 123 Query: 433 F--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + F L+ +S N ++ IL NV GA + ++ E+A SF ++ Sbjct: 124 WAIFALIWFGIS------NGTTIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSR 177 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + I LP + PY+ +GA A G W S+V+E + G+G + ++ + Sbjct: 178 SKVMTKIYLPTVLPYFFSGARLAFGFGWRVSLVAETIG------SSNGVGYRLRQAADLV 231 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPL 577 +V L M ++ L + PL Sbjct: 232 QTDQVFAWTLTMVVLMVVLEYGILKPL 258 >gi|152981435|ref|YP_001354775.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] gi|151281512|gb|ABR89922.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] Length = 276 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 10/177 (5%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A+++ IP+G+ IG I + P QLL P + PL + ++ + PN + L+ Sbjct: 94 AALVGIPLGLLIGRIKVIRDLLDPTLQLLRPVPVTAWLPL---SMIFFGIGPNAAI-FLV 149 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 G + I+FN G A N E A G +R ++LP P + G G Sbjct: 150 FLGAFYPIVFNTTFGVKAVDNRLFEAALMLGCNGSSLFRQVVLPAAMPSILNGLRLGHGF 209 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 AW +V E+ GLGA I + V+ G++++ + +R L Sbjct: 210 AWILIVVGEMTG------VPEGLGAVIMDGRMLSRTDLVIAGMVVIGIVGYSTDRIL 260 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 30/154 (19%), Positives = 66/154 (42%), Gaps = 8/154 (5%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +LP + ++ R+ + L L + + + +L P L +++ +P+ +L Sbjct: 74 ETLPLHLWKSVTRVYGGFFAAALVGIPLGLLIGRIKVIRDLLDPTLQLLRPVPVTAWLPL 133 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++++F IG AAIF +F + + F+ + + L E + +G Sbjct: 134 SMIFFG-------IGPN-AAIFLVFLGAFYPIVFNTTFGVKAVDNRLFEAALMLGCNGSS 185 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 F + +P +MP ++ + + W +V EM Sbjct: 186 LFRQVVLPAAMPSILNGLRLGHGFAWILIVVGEM 219 >gi|260768120|ref|ZP_05877054.1| nitrate ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260616150|gb|EEX41335.1| nitrate ABC transporter permease protein [Vibrio furnissii CIP 102972] Length = 322 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 13/163 (7%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLS 453 +AS+I IP+GI +G + P QLL + P+V VS Y +P S Sbjct: 125 LASLIAIPLGIVLGLNHGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAKS 184 Query: 454 LL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + + + W L N G ++ D V+ ++ W+ R I+LP P T Sbjct: 185 FVNSLFTVALCSLWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIVLPSAIPMIFT 244 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 G + G AW I +E+ + + GLG ++ + + GS Sbjct: 245 GLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 6/92 (6%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 ++F + +W + + ++ +DL VS+ RLS WQ + +P ++P + + Sbjct: 188 SLFTVALCSLWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIVLPSAIPMIFTGLR 247 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 +S+ W ++A+EM+ PG+G ++ Sbjct: 248 LSLGIAWMVLIAAEMLAQN------PGLGKFV 273 >gi|33415329|gb|AAQ18182.1| NasE [Rhodobacter capsulatus] Length = 289 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ +++++P L +L ++ FM+ P +AIF IF + +W + + + I Sbjct: 134 PLFQVLRTVPPLAWLPISLAAFMDSRP--------SAIFVIFITAIWPILINTAAGVRAI 185 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V+ RL+ + F + VP + P + + + + W +VA+EM+ G Sbjct: 186 PQDYRNVAAVLRLNPLEFFVKIMVPAAAPYIFSGLRIGVGLAWLAIVAAEMLTGGV---- 241 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I A+L + F D+L+ Sbjct: 242 --GIGFFIWDAWNSSMLTDIFVALLYIGATGFALDRLV 277 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 12/157 (7%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFP 476 + P Q+L P + P +S ++ P+ ++ +IF T W IL N AG A P Sbjct: 132 VDPLFQVLRTVPPLAWLP--ISLAAFMDSRPS---AIFVIFITAIWPILINTAAGVRAIP 186 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D++ VA+ + ++ I++P PY +G G AW A + +E+ + G Sbjct: 187 QDYRNVAAVLRLNPLEFFVKIMVPAAAPYIFSGLRIGVGLAWLAIVAAEMLTGG------ 240 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ ++ + +L + AL+R + Sbjct: 241 VGIGFFIWDAWNSSMLTDIFVALLYIGATGFALDRLV 277 >gi|330718294|ref|ZP_08312894.1| OpuABC protein [Leuconostoc fallax KCTC 3537] Length = 569 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 25/169 (14%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A VISL+ LAAKS R ++ PILD MQ++P +L V +F + + PG Sbjct: 102 ASVISLIIGVPLGILAAKSDRARAIIQPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 +FA + M + +P DL E + SF + WQK L +P + + Sbjct: 158 -----VFASIIFALPPMVRMTNLGIRQVPTDLVEAADSFGSTPWQKLIKLELPTAKNTIL 212 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G +M+++S +VV ++I PG+G + A++ D+ Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLAAVQHADV 250 >gi|119477165|ref|ZP_01617401.1| possible nitrate transport system permease protein [marine gamma proteobacterium HTCC2143] gi|119449528|gb|EAW30766.1| possible nitrate transport system permease protein [marine gamma proteobacterium HTCC2143] Length = 276 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 7/119 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E +AIF IF +W M + + N+ D V+R+ LS Q + + +P + P ++ Sbjct: 146 SEQSAIFVIFICSIWPMLINTAFGVANVRSDWVNVARTHELSQLQTAFQVILPAAAPTIL 205 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+G+I Sbjct: 206 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLNSVIFSIL-MIGII 257 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ + A+++ IP+G IG P + + PF Q+L + PL + + Sbjct: 88 SLYRVITGFVAAALVAIPLGFVIGMSPLMHRALNPFIQVLRPISPLAWMPLALFVIRDSE 147 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + +D+ VA + ++ + +ILP P Sbjct: 148 QS-----AIFVIFICSIWPMLINTAFGVANVRSDWVNVARTHELSQLQTAFQVILPAAAP 202 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +TG + G AW + +E+ G TG+G Y+ Sbjct: 203 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 235 >gi|296161625|ref|ZP_06844429.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295888102|gb|EFG67916.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 269 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 20/222 (9%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G W ++ ++ T+ + L IT++RVV ++A+++ P+GI +G + S Sbjct: 55 GKTWNALLDLIATGTFAEDL------GITLYRVVAGFLLAALVGTPLGILLGANRRLGSF 108 Query: 418 IQPFAQLLAAFPANVF--FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 +P ++ A ++ F L+ +S N ++ IL NV GA + Sbjct: 109 CEPVLSVVNTVSAAIWAIFALIWFGIS------NGTTIFVVFMEAMPLILTNVWQGAQSV 162 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ E+A SF ++ + I LP + PY+ +GA A G W S+V+E Sbjct: 163 NAEYVELARSFQMSRSKVMTKIYLPTVLPYFFSGARLAFGFGWRVSLVAETIG------S 216 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 + G+G + ++ + +V L M ++ L + PL Sbjct: 217 SNGVGYRLRQAADLVQTDQVFAWTLTMVVLMVVLEYGILKPL 258 >gi|169338022|ref|ZP_02621223.2| glycine betaine transport system permease protein opuAB [Clostridium botulinum C str. Eklund] gi|169295381|gb|EDS77514.1| glycine betaine transport system permease protein opuAB [Clostridium botulinum C str. Eklund] Length = 277 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 29/171 (16%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 + VISLL L K R L ++ P+LD MQ++P +L V++F Sbjct: 96 STVISLLIGIPIGILMNKKRILDKIITPVLDFMQTMPSFVYLIPAVMFF----------- 144 Query: 135 ELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 + + I ++ +++M ++ + L +P++LEEV +SF + + + + +P ++P Sbjct: 145 GIGNVPGIISTVIFSMPPAVRLTKLGLEQVPKELEEVGKSFGFNSIEMLYKIRIPLALPS 204 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ ++MM++S M+VV ++I G+GS + I+ D+ Sbjct: 205 IMAGINQSIMMALS----------MVVVA-SMIGTRGLGSQVLSGIQRNDI 244 >gi|241661876|ref|YP_002980236.1| nitrate ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240863903|gb|ACS61564.1| nitrate ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 283 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 180 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/178 (20%), Positives = 78/178 (43%), Gaps = 10/178 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A++I IP G IG +++ P LL + P + + + NP ++ Sbjct: 104 MAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKSANPAAIWAIF 161 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + + W ++ N G + P D+ VA +++ W+ + ++ P + PY +TG + G Sbjct: 162 IC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIG 219 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 AW + +E+ + G G+G ++ + +V+ + ++ L L L Sbjct: 220 TAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEHAL 271 >gi|299770167|ref|YP_003732193.1| ABC transporter permease [Acinetobacter sp. DR1] gi|298700255|gb|ADI90820.1| ABC transporter permease [Acinetobacter sp. DR1] Length = 262 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 15/170 (8%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 + TL A S+ L ++ P+ + ++ +P+LG ++F N E A IF I Sbjct: 88 LILGTLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGN--------GEEAKIFIIA 139 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + + +Q L + +E++R ++ S W+KF + +P ++P ++ + +++ Sbjct: 140 LASFFPLVINTFQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAVPFT 199 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAI--KEQDLLAILYAMLTMLGV 251 W ASE++ G+G+ + A E D+L + +T+ G Sbjct: 200 WITTTASELLFNAGA-----GLGNLMMKAEINAEMDILLVCAITVTLCGA 244 >gi|294679156|ref|YP_003579766.1| glycine betaine/L-proline ABC transporter permease ProW-2 [Rhodobacter capsulatus SB 1003] gi|294477972|gb|ADE87359.1| glycine betaine/L-proline ABC transporter, permease protein ProW-2 [Rhodobacter capsulatus SB 1003] Length = 303 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 24/173 (13%) Query: 69 TLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TL M+S +++++ AA+S RL ++ P+LD+MQ++P +L VV F Sbjct: 111 TLAMVSFCTLVAVVIGLPIGIAAARSDRLQRLVSPVLDVMQTLPSFVYLIPVVVIF---G 167 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 GKV G I+A V M + + R++ E + +F S QK W + +P Sbjct: 168 IGKVPGMIAVVIYA-----VPPMIRLTTLGIRLVDREVTEAAEAFGSSARQKLWNVQLPL 222 Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++P G+ +MMS+S VV + M+ VG G+G + AI Q Sbjct: 223 ALPTIMTGVNQTIMMSLS----MVVVASMVGVG-------GLGKNVLQAINNQ 264 >gi|148256707|ref|YP_001241292.1| putative nitrate ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146408880|gb|ABQ37386.1| putative nitrate ABC transporter (permease protein) (ntrB-like protein) [Bradyrhizobium sp. BTAi1] Length = 279 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ +IA I IP+G IG P +S + PF Q++ + PL + + Sbjct: 91 SLGRVMLGYLIAVAIAIPLGFLIGMSPLMSKALDPFIQIMKPISPLAWMPLALYTIKDSS 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N G ++ ++ VA + + R +ILP P Sbjct: 151 LS-----AIFVIFICSVWPMLINTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V++ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILLIGV 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMVLDQIL 268 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 18/196 (9%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 R L L A+ I++ F L S + L P + IM+ I L ++ + + Sbjct: 93 GRVMLGYLIAVAIAIPLGF----LIGMSPLMSKALDPFIQIMKPISPLAWMPLALYTIKD 148 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + L+AIF IF VW M + + ++ ++ V+R+ + ++ + + + Sbjct: 149 --------SSLSAIFVIFICSVWPMLINTAFGVASVRKEWINVARTLEVGNVRRAFTVIL 200 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P ++ M +S+ W +VA+EM+V G GIG ++ + ++ A+ Sbjct: 201 PAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAI 254 Query: 246 LTMLGVIFLYDQLLFR 261 L + V + DQ+L R Sbjct: 255 LLIGVVGMVLDQILAR 270 >gi|323497142|ref|ZP_08102162.1| nitrate ABC transporter permease protein [Vibrio sinaloensis DSM 21326] gi|323317717|gb|EGA70708.1| nitrate ABC transporter permease protein [Vibrio sinaloensis DSM 21326] Length = 322 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++A+ + IP+GI +G + P QLL + P+V VS Y +P Sbjct: 124 LLATAVAIPLGIVLGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSATYVSDDPMFAK 183 Query: 453 S-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 184 SFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIF 243 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 244 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 197 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMV 256 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 257 LIAAEMLAQN------PGLGKFV 273 >gi|329732605|gb|EGG68955.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21193] Length = 253 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|213966520|ref|ZP_03394686.1| taurine ABC transporter, permease protein [Corynebacterium amycolatum SK46] gi|213950836|gb|EEB62252.1| taurine ABC transporter, permease protein [Corynebacterium amycolatum SK46] Length = 314 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 19/183 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S+ + V+ P + ++S+P LG++ +V+F +G +++ + +F + + Sbjct: 146 SRSQAVRAVVEPYISFLRSLPPLGYIGLLIVWFG-------VG-DVSKVVLLFLATFPII 197 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T + + IP+D +R+ + Q F ++ VP ++PGL+ + ++ W +VA+ Sbjct: 198 TIATLTGIIGIPQDWNRAARTLGATNSQVFRHVIVPGTLPGLINGIRLANGMSWACIVAA 257 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLF---RPMIVW 266 EM D + PGIG +A Q A+ A + ++G+ + DQ+L R + W Sbjct: 258 EM---NDGI---PGIGG-VAYVSGTQLETALTIAAMILIGITAVIVDQILLFAERRLAPW 310 Query: 267 SNK 269 K Sbjct: 311 HGK 313 >gi|16124864|ref|NP_419428.1| nitrate ABC transporter permease [Caulobacter crescentus CB15] gi|221233583|ref|YP_002516019.1| nitrate transport permease protein NrtB [Caulobacter crescentus NA1000] gi|13421816|gb|AAK22596.1| nitrate ABC transporter, permease protein [Caulobacter crescentus CB15] gi|220962755|gb|ACL94111.1| nitrate transport permease protein nrtB [Caulobacter crescentus NA1000] Length = 296 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI +++++P L +L ++ F P +A+F IF + +W + + + Sbjct: 137 LDPIFQVLRTVPPLAWLPISLAAFHQAQP--------SALFVIFITAIWPIIINTAVGVR 188 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 NIP D V++ RLS + F+ + +P + P + + + + W +VASEM++ G Sbjct: 189 NIPSDYVNVAKVLRLSPVEYFFKILLPATTPYIFTGLRIGIGMSWLAIVASEMLLGG 245 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%) Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAF 475 + P Q+L P + P +S +++ P+ +L +IF T W I+ N G Sbjct: 136 SLDPIFQVLRTVPPLAWLP--ISLAAFHQAQPS---ALFVIFITAIWPIIINTAVGVRNI 190 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P+D+ VA ++ ++ I+LP PY TG G +W A + SE+ L Sbjct: 191 PSDYVNVAKVLRLSPVEYFFKILLPATTPYIFTGLRIGIGMSWLAIVASEML------LG 244 Query: 536 TTGLGAYIAESTEKGSFPEVVLGV 559 G+G +I + ++++G+ Sbjct: 245 GVGIGFFIWDQYNASRISDILVGL 268 >gi|302331920|gb|ADL22113.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JKD6159] Length = 253 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|187927343|ref|YP_001897830.1| nitrate ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|187724233|gb|ACD25398.1| nitrate ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] Length = 283 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 180 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 4/135 (2%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A++I IP G IG +++ P LL + P + + + NP ++ Sbjct: 104 MAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKSANPAAIWAIF 161 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + + W ++ N G + P D+ VA +++ W+ + ++ P + PY +TG + G Sbjct: 162 IC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIG 219 Query: 516 GAWNASIVSEVASWG 530 AW + +E+ + G Sbjct: 220 TAWLVIVAAEMLTGG 234 >gi|119897234|ref|YP_932447.1| putative nitrate transport system permease [Azoarcus sp. BH72] gi|119669647|emb|CAL93560.1| putative nitrate transport system, permease protein [Azoarcus sp. BH72] Length = 310 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L ++ PI+ +++ + L +L ++ F P AA + IF +W M + Sbjct: 149 LSQMMNPIISLLRPVSPLAWLPIGLLVFQRADP--------AATWTIFICSIWPMILNTA 200 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 Q + +P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ Sbjct: 201 QGVTRVPQDYLNVARVLNLSEWKVFTKILFPAVLPYMLTGIRLSIGTAWLVIVAAEMLTG 260 Query: 216 G 216 G Sbjct: 261 G 261 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 84/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + IA+++ IP G +G +S + P LL + P + + + Sbjct: 121 SLQRVGIGFGIAALVGIPAGFMLGRFAVLSQMMNPIISLLRPVSPLAWLP--IGLLVFQR 178 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +P ++ + + W ++ N G + P D+ VA +++ W+ + I+ P + PY Sbjct: 179 ADPAATWTIFIC--SIWPMILNTAQGVTRVPQDYLNVARVLNLSEWKVFTKILFPAVLPY 236 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G ++ + +++ + ++ Sbjct: 237 MLTGIRLSIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLKVEHIIIAIFVIGTV 290 Query: 566 VLALNRFL 573 L L + L Sbjct: 291 GLILEQAL 298 >gi|163850691|ref|YP_001638734.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|218529414|ref|YP_002420230.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|163662296|gb|ABY29663.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|218521717|gb|ACK82302.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 273 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RVVV + + + +P+G+++G I I P Q+L P + PL + ++ Sbjct: 80 SLYRVVVGFAVGAGLALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPL---SILWFG 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L N L+ G + +L N IAG + A S + +R +ILP PY Sbjct: 137 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPY 195 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 ++GA G A+ IV+E+ + GLG I E+ E +++ G+L + Sbjct: 196 ILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMLTIGAL 249 Query: 566 VLALN 570 L ++ Sbjct: 250 GLVID 254 >gi|49482416|ref|YP_039640.1| ABC transporter permease [Staphylococcus aureus subsp. aureus MRSA252] gi|221140719|ref|ZP_03565212.1| putative transport system permease [Staphylococcus aureus subsp. aureus str. JKD6009] gi|257424312|ref|ZP_05600741.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257426989|ref|ZP_05603391.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus subsp. aureus 65-1322] gi|257429626|ref|ZP_05606013.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257432273|ref|ZP_05608636.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257435232|ref|ZP_05611283.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282902764|ref|ZP_06310657.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus C160] gi|282907166|ref|ZP_06315014.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus Btn1260] gi|282907508|ref|ZP_06315350.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912411|ref|ZP_06320207.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp. aureus WBG10049] gi|282913030|ref|ZP_06320822.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M899] gi|282915503|ref|ZP_06323275.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus D139] gi|282921446|ref|ZP_06329164.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus C427] gi|282922657|ref|ZP_06330347.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus C101] gi|283767915|ref|ZP_06340830.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus H19] gi|283959621|ref|ZP_06377062.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293498084|ref|ZP_06665938.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus 58-424] gi|293511673|ref|ZP_06670367.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus M809] gi|293550283|ref|ZP_06672955.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M1015] gi|295426719|ref|ZP_06819358.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589080|ref|ZP_06947721.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|304380137|ref|ZP_07362857.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|49240545|emb|CAG39202.1| putative transport system permease [Staphylococcus aureus subsp. aureus MRSA252] gi|257273330|gb|EEV05432.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257276620|gb|EEV08071.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus subsp. aureus 65-1322] gi|257280107|gb|EEV10694.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257283152|gb|EEV13284.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257285828|gb|EEV15944.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|269939700|emb|CBI48068.1| putative transport system permease [Staphylococcus aureus subsp. aureus TW20] gi|282314878|gb|EFB45264.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus C101] gi|282315861|gb|EFB46245.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus C427] gi|282320606|gb|EFB50944.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus D139] gi|282323130|gb|EFB53449.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M899] gi|282324107|gb|EFB54423.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp. aureus WBG10049] gi|282328413|gb|EFB58684.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330065|gb|EFB59586.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus Btn1260] gi|282597223|gb|EFC02182.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus C160] gi|283461794|gb|EFC08878.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus H19] gi|283469415|emb|CAQ48626.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ST398] gi|283789213|gb|EFC28040.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290919330|gb|EFD96406.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M1015] gi|291097015|gb|EFE27273.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus 58-424] gi|291465631|gb|EFF08163.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus M809] gi|295129171|gb|EFG58798.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577591|gb|EFH96304.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|302750054|gb|ADL64231.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341118|gb|EFM07037.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436716|gb|ADQ75787.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH60] gi|315194629|gb|EFU25018.1| putative transport system permease [Staphylococcus aureus subsp. aureus CGS00] gi|329312871|gb|AEB87284.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus T0131] Length = 253 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|325122235|gb|ADY81758.1| sulfonate/nitrate/taurine transport system permease protein [Acinetobacter calcoaceticus PHEA-2] Length = 262 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 15/170 (8%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 + TL A S+ L ++ P+ + ++ +P+LG ++F N E A IF I Sbjct: 88 LILGTLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGN--------GEEAKIFIIA 139 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + + +Q L + +E++R ++ S W+KF + +P ++P ++ + +++ Sbjct: 140 LASFFPLVINTFQGLSHNDAKYDEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAVPFT 199 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAI--KEQDLLAILYAMLTMLGV 251 W ASE++ G+G+ + A E D+L + +T+ G Sbjct: 200 WITTTASELLFNAGA-----GLGNLMMKAEINAEMDILLVCAITVTLCGA 244 >gi|317121395|ref|YP_004101398.1| binding-protein-dependent transporters inner membrane component [Thermaerobacter marianensis DSM 12885] gi|315591375|gb|ADU50671.1| binding-protein-dependent transport systems inner membrane component [Thermaerobacter marianensis DSM 12885] Length = 285 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 22/172 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+SRR+ +++P+LD MQ++P +L ++ F L P + LA + + Sbjct: 118 AESRRVHALVIPVLDAMQTMPSFVYLIPVMMLFQALGP---VPGTLATVVYALPPVARLV 174 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + Q +P D +E +R+F + WQ + +P ++P G+ MM+++ Sbjct: 175 DLGIRQ----VPADAQEAARAFGATRWQLLAQVRLPLALPSIMAGINQTTMMALA----M 226 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G G+G + AI+ D A A T++ + + D+L Sbjct: 227 VVVASMVGAG-------GVGEAVMRAIQRVDPGAGFEAGFTIVALAIVMDRL 271 >gi|120553119|ref|YP_957470.1| binding-protein-dependent transport systems inner membrane component [Marinobacter aquaeolei VT8] gi|120322968|gb|ABM17283.1| binding-protein-dependent transport systems inner membrane component [Marinobacter aquaeolei VT8] Length = 330 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 13/173 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443 ++ V+ +AS+I +P+GI G + + + P Q+ + PLV VS Y Sbjct: 128 SLLTVLAGFALASLIAVPLGIVFGLNRYFQAAVNPLIQIFKPVSPLAWLPLVTMVVSATY 187 Query: 444 YHLNPNLWLSLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 +P S L + + W L N G +A D V+ ++ W R ++ Sbjct: 188 VSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVAAVNPDLLNVSRVLRLSFWTHVRKVV 247 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 LP P TG + G AW I +E+ + ++ GLG ++ + + GS Sbjct: 248 LPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLGKFVWDEFQNGS 294 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 11/138 (7%) Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 L ++ + +W + + + DL VSR RLS W + +P S+P + Sbjct: 199 LTSMITVTLCSLWPTLINTSVGVAAVNPDLLNVSRVLRLSFWTHVRKVVLPSSVPMIFTG 258 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVI 252 + +S+ W ++A+EM+ PG+G ++ + Q L I+ A+L + + Sbjct: 259 LRVSLGIAWMVLIAAEMLAQS------PGLGKFVWDEFQNGSSQSLSRIMVAVLAIGFIG 312 Query: 253 FLYDQ--LLFRPMIVWSN 268 FL D+ LL + + W+ Sbjct: 313 FLLDRVMLLIQRKVAWNE 330 >gi|282165192|ref|YP_003357577.1| ABC transporter permease protein [Methanocella paludicola SANAE] gi|282157506|dbj|BAI62594.1| ABC transporter permease protein [Methanocella paludicola SANAE] Length = 258 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ ++A+++ IP+G+ +G+ P IS P +++ P + L + ++ Sbjct: 62 SLLRVLLGFLVAAVVAIPMGVAMGWLPSISLVFDPVIEVIRPIPPIAWIGL---ALLWFG 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + N + L+ I G + IL N I G EVA +F W R ++LP P Sbjct: 119 IGLNSAIFLVFI-GAFFPILLNTIDGVRNVDKRLIEVAYTFGAGDWNVLRKVVLPAASPI 177 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG G W + +E+ + GLG I E + V++G+L + Sbjct: 178 IYTGMRVGMGIGWMCVVAAEMIA------VKFGLGNMILEGSNLLQTDVVMVGMLTIGLM 231 Query: 566 VLALN 570 LA+N Sbjct: 232 GLAIN 236 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%) Query: 45 PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P D+ + ++ + LD SL A + LR+L +++ + + +V P+ Sbjct: 39 PTDVFMTMLSMALD-GSLFVNAGWSLLRVLLGFLVAAVVAIPMGVAMGWLPSISLVFDPV 97 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +++++ IP + ++ +++F IG +AIF +F + + + + N+ + Sbjct: 98 IEVIRPIPPIAWIGLALLWFG-------IGLN-SAIFLVFIGAFFPILLNTIDGVRNVDK 149 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 L EV+ +F W + +P + P + M + M GW VVA+EMI V Sbjct: 150 RLIEVAYTFGAGDWNVLRKVVLPAASPIIYTGMRVGMGIGWMCVVAAEMIAV 201 >gi|71907775|ref|YP_285362.1| binding-protein dependent transport system inner membrane protein [Dechloromonas aromatica RCB] gi|71847396|gb|AAZ46892.1| Binding-protein-dependent transport systems inner membrane component [Dechloromonas aromatica RCB] Length = 271 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 24/192 (12%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV+ +I + + +P G+ +G I + P Q+L P + PL + Sbjct: 78 SLFRVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPIPPIAYIPLAI------- 130 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW L L+ G + +L N IAG + A + + W + +I Sbjct: 131 ----LWFGLGNPPSFFLIAIGAFFPVLMNTIAGVRQVDGIYLRAARNLGVNQWTMFTRVI 186 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY + G G A+ IVSE+ + GLG I E+ E +++ G Sbjct: 187 LPAATPYILAGVRIGIGTAFIVVIVSEMIA------VNDGLGFRILEAREFMWSDKIIAG 240 Query: 559 VLIMCCFVLALN 570 ++ + LA++ Sbjct: 241 MITIGLLGLAID 252 >gi|309779956|ref|ZP_07674710.1| nitrate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308921315|gb|EFP66958.1| nitrate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 287 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 183 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 184 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 238 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A++I IP G IG +++ P LL + P + + + Sbjct: 98 SLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 155 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA +++ W+ + ++ P + PY Sbjct: 156 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPAVLPY 213 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 214 MLTGVRLSIGTAWLVIVAAEMLTGG 238 >gi|88798426|ref|ZP_01114011.1| nitrate transporter system, permease component [Reinekea sp. MED297] gi|88778866|gb|EAR10056.1| nitrate transporter system, permease component [Reinekea sp. MED297] Length = 328 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 17/191 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWL 452 ++AS I IP+GI IG + P Q+L + PLV VS Y +P Sbjct: 130 LLASAIAIPLGILIGLNQFVYMAANPIIQVLKPVSPLAWLPLVTIVVSAVYVSDDPMFEK 189 Query: 453 S-----LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S + + + W L N G ++ +DF ++ + R I+LP P Sbjct: 190 SFVTSVITVTLCSLWPTLLNTAVGVASIESDFNNISRVLKLKSLTHVRKIVLPASVPMIF 249 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G AW I +E+ + + GLG ++ + + G S ++ VL++ Sbjct: 250 TGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLSRILAAVLVIGL 303 Query: 565 FVLALNR-FLW 574 L+R LW Sbjct: 304 VGFLLDRAMLW 314 >gi|240137745|ref|YP_002962217.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|254560317|ref|YP_003067412.1| alkanesulfonate ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|240007714|gb|ACS38940.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|254267595|emb|CAX23437.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens DM4] Length = 261 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RVVV + + + +P+G+++G I I P Q+L P + PL + ++ Sbjct: 68 SLYRVVVGFAVGAGLALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPL---SILWFG 124 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L N L+ G + +L N IAG + A S + +R +ILP PY Sbjct: 125 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPY 183 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 ++GA G A+ IV+E+ + GLG I E+ E +++ G+L + Sbjct: 184 ILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMLTIGAL 237 Query: 566 VLALN 570 L ++ Sbjct: 238 GLVID 242 >gi|302186230|ref|ZP_07262903.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae 642] Length = 282 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 25/235 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS VI V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + LS ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAASK------GL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---PMIVWSNKFRLERTTG 277 G ++ + +L A++ + + L D LL R + W + F + G Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLARLEKRFLAWRDTFNGQSREG 282 Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust. Identities = 38/186 (20%), Positives = 78/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + ++ +R R I+ Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + +W + +E+ + + GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ASKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|289207851|ref|YP_003459917.1| nitrate ABC transporter inner membrane subunit [Thioalkalivibrio sp. K90mix] gi|288943482|gb|ADC71181.1| nitrate ABC transporter, inner membrane subunit [Thioalkalivibrio sp. K90mix] Length = 311 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ +++++P L +L ++ F P +AIF IF + +W + + + Sbjct: 152 LDPLFQVLRTVPPLAWLPISLAAFQASNP--------SAIFVIFITAIWPIIINTSVGIR 203 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NI +D V+R RL+G++ F + +P + P + + + + W +VA+EM++ G Sbjct: 204 NISQDYVNVARVLRLNGFEYFTKIMLPAAAPYVFSGLRIGIGLAWLAIVAAEMLIGGV-- 261 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A L I+ A++ + V F D+L+ Sbjct: 262 ----GIGFFIWDAWNASMLSDIVLALVYVGLVGFFLDRLV 297 Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A + I +G+ +G + P Q+L P + P +S Sbjct: 115 WQLLASLERVAYGYALAVVAGIGLGVLVGQSTWAMRGLDPLFQVLRTVPPLAWLP--ISL 172 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ NP+ ++ +IF T W I+ N G D+ VA + G+ ++ I+L Sbjct: 173 AAFQASNPS---AIFVIFITAIWPIIINTSVGIRNISQDYVNVARVLRLNGFEYFTKIML 229 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY +G G AW A + +E+ G G+G +I ++ ++VL + Sbjct: 230 PAAAPYVFSGLRIGIGLAWLAIVAAEMLIGG------VGIGFFIWDAWNASMLSDIVLAL 283 Query: 560 LIMCCFVLALNRFL 573 + + L+R + Sbjct: 284 VYVGLVGFFLDRLV 297 >gi|294341758|emb|CAZ90183.1| Nitrate transporter component [Thiomonas sp. 3As] Length = 304 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 8/124 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L P++ +++ + L +L + F N A AAI+ IF +W M + Sbjct: 142 LNRMLSPLISLLRPVSPLAWLPIGLYVFSN--------APAAAIYTIFICSIWPMMINTA 193 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + IP D V+R LS W+ F + +P MP ++ + +S+ W +VA+EM+ Sbjct: 194 IGVQRIPADYLNVARVLDLSTWKVFTKILLPSVMPYMMTGVRLSVGTAWLVIVAAEMLTG 253 Query: 216 GDTV 219 G + Sbjct: 254 GTGI 257 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 13/207 (6%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG---CITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + WQS + H Y + + +G ++ RV +A+++ IP+G IG ++ Sbjct: 84 VTWQSAQKVFAHPFYDNGPNDVGIGWNLLASLQRVAYGFGLAALVGIPLGFAIGRVQFLN 143 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P LL + P+ + Y N + + W ++ N G Sbjct: 144 RMLSPLISLLRPVSPLAWLPIGL----YVFSNAPAAAIYTIFICSIWPMMINTAIGVQRI 199 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D+ VA ++ W+ + I+LP + PY +TG + G AW + +E+ + G Sbjct: 200 PADYLNVARVLDLSTWKVFTKILLPSVMPYMMTGVRLSVGTAWLVIVAAEMLTGG----- 254 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIM 562 TG+G ++ + +++ +L++ Sbjct: 255 -TGIGFWLWNEWNNLNLAHIIIAILVI 280 >gi|15923164|ref|NP_370698.1| hypothetical protein SAV0174 [Staphylococcus aureus subsp. aureus Mu50] gi|15925878|ref|NP_373411.1| hypothetical protein SA0168 [Staphylococcus aureus subsp. aureus N315] gi|21281877|ref|NP_644963.1| hypothetical protein MW0148 [Staphylococcus aureus subsp. aureus MW2] gi|49485050|ref|YP_042271.1| putative transport system permease [Staphylococcus aureus subsp. aureus MSSA476] gi|148266599|ref|YP_001245542.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JH9] gi|150392638|ref|YP_001315313.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JH1] gi|156978504|ref|YP_001440763.1| hypothetical protein SAHV_0173 [Staphylococcus aureus subsp. aureus Mu3] gi|253316390|ref|ZP_04839603.1| hypothetical protein SauraC_09651 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253734736|ref|ZP_04868901.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|255004970|ref|ZP_05143571.2| hypothetical protein SauraM_00835 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794012|ref|ZP_05642991.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258408580|ref|ZP_05680865.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258421170|ref|ZP_05684097.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A9719] gi|258438920|ref|ZP_05690011.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|258444155|ref|ZP_05692489.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258447034|ref|ZP_05695184.1| ABC transporter, permease [Staphylococcus aureus A6300] gi|258448492|ref|ZP_05696605.1| ABC transporter, permease [Staphylococcus aureus A6224] gi|258455725|ref|ZP_05703680.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A5937] gi|269201825|ref|YP_003281094.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED98] gi|282893330|ref|ZP_06301563.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8117] gi|282926281|ref|ZP_06333913.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A10102] gi|295405444|ref|ZP_06815254.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8819] gi|296276222|ref|ZP_06858729.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MR1] gi|297209321|ref|ZP_06925720.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244781|ref|ZP_06928661.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8796] gi|300911320|ref|ZP_07128769.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|13700090|dbj|BAB41389.1| SA0168 [Staphylococcus aureus subsp. aureus N315] gi|14245941|dbj|BAB56336.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21203312|dbj|BAB94013.1| MW0148 [Staphylococcus aureus subsp. aureus MW2] gi|49243493|emb|CAG41917.1| putative transport system permease [Staphylococcus aureus subsp. aureus MSSA476] gi|147739668|gb|ABQ47966.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JH9] gi|149945090|gb|ABR51026.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JH1] gi|156720639|dbj|BAF77056.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|253727215|gb|EES95944.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|257787984|gb|EEV26324.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257840589|gb|EEV65048.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257842594|gb|EEV67016.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A9719] gi|257847796|gb|EEV71792.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|257850414|gb|EEV74362.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257854047|gb|EEV77000.1| ABC transporter, permease [Staphylococcus aureus A6300] gi|257858123|gb|EEV81011.1| ABC transporter, permease [Staphylococcus aureus A6224] gi|257861937|gb|EEV84710.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A5937] gi|262074115|gb|ACY10088.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED98] gi|282591610|gb|EFB96681.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A10102] gi|282764016|gb|EFC04143.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8117] gi|285815899|gb|ADC36386.1| ABC transporter permease protein with unknown substrate [Staphylococcus aureus 04-02981] gi|294969519|gb|EFG45538.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8819] gi|296886254|gb|EFH25188.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178298|gb|EFH37545.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8796] gi|300887499|gb|EFK82695.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|312828698|emb|CBX33540.1| binding-protein-dependent transport system inner membrane component family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130148|gb|EFT86136.1| hypothetical protein CGSSa03_04749 [Staphylococcus aureus subsp. aureus CGS03] gi|329725698|gb|EGG62177.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21172] Length = 253 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|57651175|ref|YP_185058.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus COL] gi|87161514|ref|YP_492890.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193951|ref|YP_498738.1| hypothetical protein SAOUHSC_00138 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220330|ref|YP_001331153.1| hypothetical protein NWMN_0118 [Staphylococcus aureus subsp. aureus str. Newman] gi|161508439|ref|YP_001574098.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258451611|ref|ZP_05699637.1| ABC transporter [Staphylococcus aureus A5948] gi|262048266|ref|ZP_06021152.1| hypothetical protein SAD30_1687 [Staphylococcus aureus D30] gi|262051065|ref|ZP_06023290.1| hypothetical protein SA930_0646 [Staphylococcus aureus 930918-3] gi|284023186|ref|ZP_06377584.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 132] gi|294849107|ref|ZP_06789851.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A9754] gi|57285361|gb|AAW37455.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus COL] gi|87127488|gb|ABD22002.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201509|gb|ABD29319.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373130|dbj|BAF66390.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160367248|gb|ABX28219.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860659|gb|EEV83481.1| ABC transporter [Staphylococcus aureus A5948] gi|259160968|gb|EEW45987.1| hypothetical protein SA930_0646 [Staphylococcus aureus 930918-3] gi|259163576|gb|EEW48132.1| hypothetical protein SAD30_1687 [Staphylococcus aureus D30] gi|294823999|gb|EFG40424.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A9754] gi|315198394|gb|EFU28724.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320141497|gb|EFW33338.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142247|gb|EFW34062.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329731875|gb|EGG68235.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21189] Length = 253 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|291619197|ref|YP_003521939.1| TauC [Pantoea ananatis LMG 20103] gi|291154227|gb|ADD78811.1| TauC [Pantoea ananatis LMG 20103] Length = 276 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 10/169 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVGI +G P + + I P +L P + PL+V + + L L IF Sbjct: 100 IPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 157 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 ++ + +AG A+S T W+ R++ILPG P +TG G W+ Sbjct: 158 --VVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWVILPGALPEILTGLRIGLGVGWSTL 215 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ + T GLG + + E + V+ G+ ++ L Sbjct: 216 VAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFGLE 258 >gi|262369775|ref|ZP_06063103.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein [Acinetobacter johnsonii SH046] gi|262315843|gb|EEY96882.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein [Acinetobacter johnsonii SH046] Length = 273 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 8/146 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+ +I ++A L ++++ L P ++SIP L ++ +++ Sbjct: 80 STWRVFLGFLIGSALALMFAILVGLNKQVEAFLEPSFSAIKSIPSLAWIPLLLLWLGIDE 139 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+ + A F +T+ V ++ + R L EV+R +RL WQ+ + +P Sbjct: 140 ASKITLIAIGAFFPTYTNTV--------AAIKGVDRKLIEVARVYRLKYWQQVQQIILPA 191 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213 + PG++ + S+S W F++A+E+I Sbjct: 192 ASPGILTGLRNSLSLAWMFMIAAELI 217 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + +RV + +I S + + I +G + + ++P + + P+ + PL++ Sbjct: 80 STWRVFLGFLIGSALALMFAILVGLNKQVEAFLEPSFSAIKSIPSLAWIPLLL------- 132 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + N +A EVA + + W+ + II Sbjct: 133 ----LWLGIDEASKITLIAIGAFFPTYTNTVAAIKGVDRKLIEVARVYRLKYWQQVQQII 188 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG + AW I +E+ + T G+G Y+ + S P++V+ Sbjct: 189 LPAASPGILTGLRNSLSLAWMFMIAAELIA------ATQGIG-YLLSDGRETSRPDIVIL 241 Query: 559 VLIMCC 564 +I+ Sbjct: 242 AIILLA 247 >gi|220909929|ref|YP_002485240.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866540|gb|ACL46879.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 280 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 12/181 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV V ++A+++ I +GI IG I + Q+L P + PL S Sbjct: 85 WHLLASLQRVAVGFLLAAVVGIGLGILIGTNALIYDALDFVFQVLRTVPPLAWLPL--SL 142 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + P+ ++ +IF T W I+ N G P D++ VA ++ ++ I+L Sbjct: 143 AMFRDNQPS---AIFVIFITAIWPIIINTAVGVQQVPQDYRNVAKVLKLSRVEYFLNILL 199 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P PY TG G +W A + +E+ G G+G +I ++ E++L + Sbjct: 200 PSTVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISEIILAL 253 Query: 560 L 560 + Sbjct: 254 I 254 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 79/157 (50%), Gaps = 14/157 (8%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + +++++P L +L ++ F + P +AIF IF + +W + + + +P Sbjct: 125 VFQVLRTVPPLAWLPLSLAMFRDNQP--------SAIFVIFITAIWPIIINTAVGVQQVP 176 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 +D V++ +LS + F + +P ++P + + + + W +VA+EM++ G Sbjct: 177 QDYRNVAKVLKLSRVEYFLNILLPSTVPYVFTGLRIGIGLSWLAIVAAEMLIGGV----- 231 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A++ + V F+ D+L+ Sbjct: 232 -GIGFFIWDAWNSSLISEIILALIYVGIVGFILDKLV 267 >gi|166368071|ref|YP_001660344.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843] gi|166090444|dbj|BAG05152.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843] Length = 256 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 10/174 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+V +++AS I +P+G+ IG + S + Q L + PL V + Sbjct: 71 RVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFLRMISPLSWMPLAVMVLGI----G 126 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 +L + L+ W IL N AG +A + +A S T IILP I + +T Sbjct: 127 DLPVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQIILPAILSHLLT 186 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G A G W + +E+ + GLG YI ++ ++ ++ E++ +L++ Sbjct: 187 GFRLAIGIIWIVLVPAEMLG------VSAGLGYYILDTRDRLAYSELMAVILVI 234 >gi|284052996|ref|ZP_06383206.1| nitrate ABC transporter, permease protein [Arthrospira platensis str. Paraca] gi|291568385|dbj|BAI90657.1| putative nitrate ABC transport permease protein [Arthrospira platensis NIES-39] Length = 271 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W I++ RV + I+AS+I +P+GI IG + P+ QLL + PL + Sbjct: 78 WNLLISLRRVAIGYIMASVIAVPLGILIGISKIAAKAFNPYVQLLKPVSPLAWLPLGL-- 135 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 Y + +++ + W L N G S +D+ +VA + + WR +I+P Sbjct: 136 --YLFRDSEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRTIFKVIIP 193 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 P ++G + G +W + +E+ L TGLG +I Sbjct: 194 AALPNIISGLRISMGISWLVIVAAEM-------LLGTGLGYFI 229 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 43/81 (53%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E IF I S +W + + N+ D +V+R+ S W+ + + +P ++P ++ Sbjct: 141 SEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRTIFKVIIPAALPNII 200 Query: 194 WNMMMSMSGGWFFVVASEMIV 214 + +SM W +VA+EM++ Sbjct: 201 SGLRISMGISWLVIVAAEMLL 221 >gi|147920986|ref|YP_685204.1| putative ABC-type sulfonate import system, permease component [uncultured methanogenic archaeon RC-I] gi|110620600|emb|CAJ35878.1| putative ABC-type sulfonate import system, permease component [uncultured methanogenic archaeon RC-I] Length = 257 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + A ++ +P+GI +G+ IS + P ++L P P+ ++ Sbjct: 62 SLLRVILGFLAAVVVAVPLGIAMGWVREISYVVDPVIEVLRPIP-----PIAWIGLALLW 116 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 N L ++ ++F G + IL N ++G EVA +F T + R +++P P Sbjct: 117 FNIGLTSAVFLVFIGAVFPILLNTVSGVRNVDRKLIEVAYTFGATDFEILRKVVMPAALP 176 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG G W + +E+ + GLG I E++ +V++G++++ Sbjct: 177 TIYTGMRVGMGIGWMCVVAAEMVA------VKFGLGNLILEASNFLQTDKVLVGMIMIGI 230 Query: 565 FVLALN 570 L +N Sbjct: 231 LGLLIN 236 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 84/169 (49%), Gaps = 11/169 (6%) Query: 50 DIVPITLDV---HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 D++ T+D+ L +A + LR++ + +++ R + V+ P++++ Sbjct: 41 DVLLTTIDMVMDGELFMHAGYSLLRVILGFLAAVVVAVPLGIAMGWVREISYVVDPVIEV 100 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 ++ IP + ++ +++F IG +A+F +F V+ + + + N+ R L Sbjct: 101 LRPIPPIAWIGLALLWFN-------IGLT-SAVFLVFIGAVFPILLNTVSGVRNVDRKLI 152 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 EV+ +F + ++ + +P ++P + M + M GW VVA+EM+ V Sbjct: 153 EVAYTFGATDFEILRKVVMPAALPTIYTGMRVGMGIGWMCVVAAEMVAV 201 >gi|153953414|ref|YP_001394179.1| ProW [Clostridium kluyveri DSM 555] gi|219854039|ref|YP_002471161.1| hypothetical protein CKR_0696 [Clostridium kluyveri NBRC 12016] gi|146346295|gb|EDK32831.1| ProW [Clostridium kluyveri DSM 555] gi|219567763|dbj|BAH05747.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 274 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 19/160 (11%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 PQ L ++S + ISL+ LA++S V+ PILD MQ++P +L V+ Sbjct: 85 PQTMETLALVIVSTL-ISLIIGIPLGILASRSEGFNRVIRPILDFMQTMPAFVYLIPAVL 143 Query: 122 YFMNLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +F GKV GA IF++ + ++ N+ + +P D+ E +RSF + Q Sbjct: 144 FFGM---GKVPGAISTVIFSMPPAVRLTNL------GIRQVPEDVIEAARSFGSTKSQML 194 Query: 181 WYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 + + +P ++P G+ +M+S+S VV S MI G Sbjct: 195 YKVQIPIALPTILAGVNQTIMLSLS----MVVISAMIGAG 230 >gi|134097166|ref|YP_001102827.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] gi|291005377|ref|ZP_06563350.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] gi|133909789|emb|CAL99901.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] Length = 247 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 22/227 (9%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI------------IWIPVGIW 407 A+ +G + + L ++ L + R+ +L +IAS+ I +P G+ Sbjct: 12 AFSRLGPVPQQYLPPPSLVLVRLAELLGDRMFLLDVIASVLAWAIALGISVVIAVPAGLL 71 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 +G P + + + L P+ PL + + PN +SL ++ + W ILFN Sbjct: 72 LGSVPAVRVATRAIIEFLRPIPSVALIPLALVLIGS---GPNTKISL-AVYASVWPILFN 127 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 I E A SF + R + LP P+ +TG + A + +E Sbjct: 128 TIYALDEMDPVMVETARSFGLGRARVLFSVALPNSAPFVLTGVRMSAAVALILVVSTEFL 187 Query: 528 SWGHIHLRTTGLGAYIAE-STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + G T+GLG+++ + ST G V+ G L+ A+N L Sbjct: 188 AGG-----TSGLGSFVLDASTGAGRMDLVLAGTLVAGVIGFAINEAL 229 >gi|154245032|ref|YP_001415990.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154159117|gb|ABS66333.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 362 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 16/190 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +IA++I +P+GI G + I P Q+ + P+V VS +L+P+ + Sbjct: 167 LIATVIAVPLGIASGLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPK 226 Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 ++ + W L N G ++ D V ++ R ++LP P Sbjct: 227 SLVISAVTVTLCSLWPTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIF 286 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S +++ VL + Sbjct: 287 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARIMVAVLTIGI 340 Query: 565 FVLALNRFLW 574 L+R ++ Sbjct: 341 IGFMLDRIMY 350 Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 12/174 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY--PGKVIGAELA-AIFAIFTSQVWN 149 S+ + P++ I + + L +L + LY P + L + + +W Sbjct: 183 SKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSLWP 242 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + +I +DL V + +LS L +P S+P + + +S+ GW ++A Sbjct: 243 TLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVLIA 302 Query: 210 SEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLLF 260 +EM+ PG+G ++ D LA I+ A+LT+ + F+ D++++ Sbjct: 303 AEMLAQN------PGLGKFVWDEFQNGSSDSLARIMVAVLTIGIIGFMLDRIMY 350 >gi|227432669|ref|ZP_03914642.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351551|gb|EEJ41804.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 573 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 25/169 (14%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A ++SL+ L AKS++ +V+ PILD MQ++P +L V +F + + PG Sbjct: 107 ASIVSLIIGIPLGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 162 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 +FA + M + +P DL E + SF + WQK + L +P + + Sbjct: 163 -----VFASIIFALPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNTIL 217 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G +M+++S +VV ++I PG+G + A++ D+ Sbjct: 218 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQHADV 255 >gi|209526428|ref|ZP_03274956.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] gi|209493201|gb|EDZ93528.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] Length = 271 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W I++ RV + I+AS+I +P+GI IG + P+ QLL + PL + Sbjct: 78 WNLLISLRRVAIGYIMASVIAVPLGILIGISKIAAKAFNPYVQLLKPVSPLAWLPLGL-- 135 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 Y + +++ + W L N G S +D+ +VA + + WR +I+P Sbjct: 136 --YLFRDSEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRTIFKVIIP 193 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 P ++G + G +W + +E+ L TGLG +I Sbjct: 194 AALPNIISGLRISMGISWLVIVAAEM-------LLGTGLGYFI 229 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 43/81 (53%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E IF I S +W + + N+ D +V+R+ S W+ + + +P ++P ++ Sbjct: 141 SEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRTIFKVIIPAALPNII 200 Query: 194 WNMMMSMSGGWFFVVASEMIV 214 + +SM W +VA+EM++ Sbjct: 201 SGLRISMGISWLVIVAAEMLL 221 >gi|260173414|ref|ZP_05759826.1| putative glycine betaine transport system permease protein [Bacteroides sp. D2] gi|315921686|ref|ZP_07917926.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695561|gb|EFS32396.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 274 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 16/155 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ ++L+F A S R +L PILD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTCLALIFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G IFA+ V +T + +P+++ E SRSF + WQ + + +P Sbjct: 144 GLGTVPGVFATIIFAM--PPVVRLT---GLGIRQVPKNVVEASRSFGATRWQLLYKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 ++P G+ +MMS+S VV + MI G Sbjct: 199 LALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 9/156 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 IAW G ++ FT +L + +G T+ V+ +A I +P+GIW P Sbjct: 56 IAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLALIFGVPLGIWTANSPR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++P L+ PA V+ + V ++ L + +IF + + G Sbjct: 116 ADKILRPILDLMQTMPAFVYL---IPAVLFFGLGTVPGVFATIIFAMPPVVRLTGL-GIR 171 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|327395527|dbj|BAK12949.1| taurine transport system permease protein TauC [Pantoea ananatis AJ13355] Length = 276 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 10/169 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVGI +G P + + I P +L P + PL+V + + L L IF Sbjct: 100 IPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 157 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 ++ + +AG A+S T W+ R++ILPG P +TG G W+ Sbjct: 158 --VVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWVILPGALPEILTGLRIGLGVGWSTL 215 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ + T GLG + + E + V+ G+ ++ L Sbjct: 216 VAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFGLE 258 >gi|227519676|ref|ZP_03949725.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis TX0104] gi|227072900|gb|EEI10863.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis TX0104] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|257416825|ref|ZP_05593819.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis AR01/DG] gi|257158653|gb|EEU88613.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis ARO1/DG] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|257084383|ref|ZP_05578744.1| amino acid ABC transporter, permease [Enterococcus faecalis Fly1] gi|256992413|gb|EEU79715.1| amino acid ABC transporter, permease [Enterococcus faecalis Fly1] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|256963755|ref|ZP_05567926.1| OpuABC [Enterococcus faecalis HIP11704] gi|307271702|ref|ZP_07552973.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0855] gi|256954251|gb|EEU70883.1| OpuABC [Enterococcus faecalis HIP11704] gi|306511580|gb|EFM80579.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0855] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|256853947|ref|ZP_05559312.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T8] gi|307290350|ref|ZP_07570265.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0411] gi|256710890|gb|EEU25933.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T8] gi|306498543|gb|EFM68045.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0411] gi|315030307|gb|EFT42239.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX4000] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|300692646|ref|YP_003753641.1| nitrate ABC transporter [Ralstonia solanacearum PSI07] gi|299079706|emb|CBJ52383.1| nitrate ABC transporter [Ralstonia solanacearum PSI07] Length = 283 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 180 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A++I IP G +G +++ P LL + P + + + Sbjct: 94 SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA +++ W+ + ++ P + PY Sbjct: 152 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPAVLPY 209 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G ++ + +V+ + ++ Sbjct: 210 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 263 Query: 566 VLALNRFL 573 L L + L Sbjct: 264 GLLLEQAL 271 >gi|116617483|ref|YP_817854.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096330|gb|ABJ61481.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 571 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 25/169 (14%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A ++SL+ L AKS++ +V+ PILD MQ++P +L V +F + + PG Sbjct: 105 ASIVSLIIGIPLGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 160 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 +FA + M + +P DL E + SF + WQK + L +P + + Sbjct: 161 -----VFASIIFALPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNTIL 215 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G +M+++S +VV ++I PG+G + A++ D+ Sbjct: 216 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQHADV 253 >gi|319779828|ref|YP_004139304.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165716|gb|ADV09254.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 295 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 21/195 (10%) Query: 69 TLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T++ +S +++S + V ++S R+ V+ P+LD+MQ++P +L V M Sbjct: 100 TMKTVSMILVSTIIAIVLGAPVGIAMSRSERIQRVINPVLDVMQTMPSFVYLIPVV---M 156 Query: 125 NLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 L GKV G I+AI ++ N+ + + +D+ E + +F S WQK + Sbjct: 157 LLGIGKVPGVIAVVIYAIPPMIRLTNLGIRL------VDKDVLEAADAFGSSNWQKLRDV 210 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P ++ + ++ VV + MI V G+G + AI Q L+ Sbjct: 211 QIPLALPTIMAGVNQTIMMALAMVVIASMIGV-------QGLGQPVLKAINNQYFTLGLF 263 Query: 244 AMLTMLGVIFLYDQL 258 L ++G+ ++D++ Sbjct: 264 NGLAIVGIAIIFDRI 278 >gi|299149362|ref|ZP_07042419.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_23] gi|298512549|gb|EFI36441.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_23] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 16/155 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ ++L+F A S R +L PILD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTCLALIFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G IFA+ V +T + +P+++ E SRSF + WQ + + +P Sbjct: 144 GLGTVPGVFATIIFAM--PPVVRLT---GLGIRQVPKNVVEASRSFGATRWQLLYKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 ++P G+ +MMS+S VV + MI G Sbjct: 199 LALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 9/156 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 IAW G ++ FT +L + +G T+ V+ +A I +P+GIW P Sbjct: 56 IAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLALIFGVPLGIWTANSPR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++P L+ PA V+ + V ++ L + +IF + + G Sbjct: 116 ADKILRPILDLMQTMPAFVYL---IPAVLFFGLGTVPGVFATIIFAMPPVVRLTGL-GIR 171 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|315149978|gb|EFT93994.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0012] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|315148611|gb|EFT92627.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX4244] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|29377126|ref|NP_816280.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecalis V583] gi|227554134|ref|ZP_03984181.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|229549238|ref|ZP_04437963.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis ATCC 29200] gi|255971952|ref|ZP_05422538.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T1] gi|255975006|ref|ZP_05425592.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T2] gi|256616850|ref|ZP_05473696.1| OpuABC [Enterococcus faecalis ATCC 4200] gi|256763274|ref|ZP_05503854.1| OpuABC [Enterococcus faecalis T3] gi|256957876|ref|ZP_05562047.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis DS5] gi|256961126|ref|ZP_05565297.1| OpuABC [Enterococcus faecalis Merz96] gi|257079813|ref|ZP_05574174.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis JH1] gi|257081841|ref|ZP_05576202.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis E1Sol] gi|257087618|ref|ZP_05581979.1| ABC transporter permease [Enterococcus faecalis D6] gi|257090777|ref|ZP_05585138.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis CH188] gi|257420040|ref|ZP_05597034.1| ABC betaine transporter permease and substrate binding protein [Enterococcus faecalis T11] gi|257421781|ref|ZP_05598771.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis X98] gi|293384072|ref|ZP_06629966.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Enterococcus faecalis R712] gi|293386886|ref|ZP_06631456.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Enterococcus faecalis S613] gi|294781364|ref|ZP_06746706.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis PC1.1] gi|300860960|ref|ZP_07107047.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis TUSoD Ef11] gi|307270648|ref|ZP_07551939.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX4248] gi|307276884|ref|ZP_07557995.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX2134] gi|307285514|ref|ZP_07565653.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0860] gi|307287539|ref|ZP_07567582.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0109] gi|312902408|ref|ZP_07761614.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0635] gi|312907977|ref|ZP_07766960.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis DAPTO 512] gi|312953668|ref|ZP_07772505.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0102] gi|312978495|ref|ZP_07790233.1| ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein [Enterococcus faecalis DAPTO 516] gi|29344592|gb|AAO82350.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecalis V583] gi|227176760|gb|EEI57732.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|229305475|gb|EEN71471.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis ATCC 29200] gi|255962970|gb|EET95446.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T1] gi|255967878|gb|EET98500.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T2] gi|256596377|gb|EEU15553.1| OpuABC [Enterococcus faecalis ATCC 4200] gi|256684525|gb|EEU24220.1| OpuABC [Enterococcus faecalis T3] gi|256948372|gb|EEU65004.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis DS5] gi|256951622|gb|EEU68254.1| OpuABC [Enterococcus faecalis Merz96] gi|256987843|gb|EEU75145.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis JH1] gi|256989871|gb|EEU77173.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis E1Sol] gi|256995648|gb|EEU82950.1| ABC transporter permease [Enterococcus faecalis D6] gi|256999589|gb|EEU86109.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis CH188] gi|257161868|gb|EEU91828.1| ABC betaine transporter permease and substrate binding protein [Enterococcus faecalis T11] gi|257163605|gb|EEU93565.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis X98] gi|291078552|gb|EFE15916.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Enterococcus faecalis R712] gi|291083720|gb|EFE20683.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Enterococcus faecalis S613] gi|294451491|gb|EFG19951.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis PC1.1] gi|295113609|emb|CBL32246.1| ABC-type proline/glycine betaine transport system, permease component [Enterococcus sp. 7L76] gi|300849999|gb|EFK77749.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis TUSoD Ef11] gi|306501277|gb|EFM70580.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0109] gi|306502738|gb|EFM72003.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0860] gi|306506521|gb|EFM75680.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX2134] gi|306512958|gb|EFM81599.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX4248] gi|310626068|gb|EFQ09351.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis DAPTO 512] gi|310628506|gb|EFQ11789.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0102] gi|310634078|gb|EFQ17361.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0635] gi|311288644|gb|EFQ67200.1| ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein [Enterococcus faecalis DAPTO 516] gi|315025224|gb|EFT37156.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX2137] gi|315032769|gb|EFT44701.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0017] gi|315035772|gb|EFT47704.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0027] gi|315143732|gb|EFT87748.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX2141] gi|315151935|gb|EFT95951.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0031] gi|315155518|gb|EFT99534.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0043] gi|315159185|gb|EFU03202.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0312] gi|315162244|gb|EFU06261.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0645] gi|315164936|gb|EFU08953.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX1302] gi|315168629|gb|EFU12646.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX1341] gi|315170114|gb|EFU14131.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX1342] gi|315173750|gb|EFU17767.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX1346] gi|315576241|gb|EFU88432.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0309B] gi|315579182|gb|EFU91373.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0630] gi|315582957|gb|EFU95148.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0309A] gi|323481572|gb|ADX81011.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis 62] gi|327535867|gb|AEA94701.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter [Enterococcus faecalis OG1RF] gi|329577362|gb|EGG58818.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis TX1467] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|229544994|ref|ZP_04433719.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis TX1322] gi|229309886|gb|EEN75873.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis TX1322] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|329954688|ref|ZP_08295748.1| glycine betaine transport system permease protein opuAB [Bacteroides clarus YIT 12056] gi|328527229|gb|EGF54233.1| glycine betaine transport system permease protein opuAB [Bacteroides clarus YIT 12056] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 16/155 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ ++LL A S R ++ PILD MQ++P +L V++F Sbjct: 87 QTLALVLSSTCLALLLGVPLGIWTANSNRCNKIMRPILDFMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P+++ E SRSF + WQ + + +P Sbjct: 144 GLGTVPGAFATVIFAM--PPVVRLT---GLGIRQVPKNVVEASRSFGATPWQLLYKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 ++P G+ +MMS+S VV + MI G Sbjct: 199 LALPTIMTGINQTIMMSLS----MVVIAAMISAGG 229 >gi|312900011|ref|ZP_07759329.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0470] gi|311293007|gb|EFQ71563.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0470] Length = 569 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 26/174 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 93 STVTLVLLSS-VISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIPAVAFF-- 149 Query: 126 LYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T + N+ + +P +L E + S+ +GWQK + L Sbjct: 150 -GIGMVPGVFASVIFALPPTVRFTNL------GIRQVPNELVEAADSYGSTGWQKLFKLE 202 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 203 LPLAKNTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 245 >gi|332531267|ref|ZP_08407180.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] gi|332039374|gb|EGI75787.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] Length = 257 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 21/203 (10%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ ++A++I +P+GI +G + + ++PF PA+ F PL++ Sbjct: 66 MTVWRVLGGFVLAAVIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGIG 125 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L +L+IF G+ + I+ V A D E A + + + +++PG Sbjct: 126 ELQ-----KVLVIFIGSVFQIVLMVAVTVGAARKDLVEAAYTLGASNGGIVKRVLIPGAA 180 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 181 PEIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 234 Query: 564 CFVL-------ALNR--FLWHPL 577 L ALNR F W L Sbjct: 235 LIGLVSDFAFKALNRRLFAWSSL 257 >gi|170077483|ref|YP_001734121.1| sulfonate/nitrate transport system permease protein [Synechococcus sp. PCC 7002] gi|169885152|gb|ACA98865.1| sulfonate/nitrate transport system permease protein [Synechococcus sp. PCC 7002] Length = 278 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 13/191 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W I++ RV + + AS + +P+GI IG P PF QLL + PL Sbjct: 85 WNLLISLRRVAIGYLAASCVAVPLGILIGISPIARKGFNPFIQLLKPVSPLAWLPL---- 140 Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 Y L + + +IF + W L N G + ++ +VA + + +R +I+ Sbjct: 141 -GLYVLRDSEQTGVFIIFISSIWPTLINTSFGVANVSKEYLDVAKTLGASSFRTIFKVII 199 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P ++G + G AW + +E+ L TGLG +I P +++ + Sbjct: 200 PAALPNILSGLRISMGIAWLVIVAAEM-------LLGTGLGYFIWNEWNNLYIPNILVAI 252 Query: 560 LIMCCFVLALN 570 LI+ L L+ Sbjct: 253 LIIGLVGLILD 263 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 18/81 (22%), Positives = 45/81 (55%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E +F IF S +W + + N+ ++ +V+++ S ++ + + +P ++P ++ Sbjct: 148 SEQTGVFIIFISSIWPTLINTSFGVANVSKEYLDVAKTLGASSFRTIFKVIIPAALPNIL 207 Query: 194 WNMMMSMSGGWFFVVASEMIV 214 + +SM W +VA+EM++ Sbjct: 208 SGLRISMGIAWLVIVAAEMLL 228 >gi|300705265|ref|YP_003746868.1| nitrate ABC transporter [Ralstonia solanacearum CFBP2957] gi|299072929|emb|CBJ44285.1| nitrate ABC transporter [Ralstonia solanacearum CFBP2957] Length = 283 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 180 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A+++ IP G +G +++ P LL + P + + + Sbjct: 94 SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA +++ W+ + ++ P + PY Sbjct: 152 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 209 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G ++ + +V+ + ++ Sbjct: 210 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 263 Query: 566 VLALNRFL 573 L L + L Sbjct: 264 GLLLEQAL 271 >gi|150398812|ref|YP_001322579.1| binding-protein-dependent transport systems inner membrane component [Methanococcus vannielii SB] gi|150011515|gb|ABR53967.1| binding-protein-dependent transport systems inner membrane component [Methanococcus vannielii SB] Length = 277 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 15/187 (8%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L++ +I+LL L A+S+ + +++ PILDIMQ++P L +L V++F G+V Sbjct: 97 ILTSTIIALLIGIPLGILKARSKTINLIISPILDIMQTLPSLAYLIPAVLFF---GIGEV 153 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 G IFA+ + + Q + +L EV R+F + WQ + +P ++P Sbjct: 154 PGIIATVIFAM-PPAIKLTALGIEQ----VSDELVEVGRAFGSTSWQILTKIELPTALPS 208 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 ++ + ++ + VV + I G G+G I I+ L L A + + + Sbjct: 209 IMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFL 261 Query: 252 IFLYDQL 258 ++D++ Sbjct: 262 AMIFDRI 268 >gi|113866388|ref|YP_724877.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525164|emb|CAJ91509.1| ABC-type transporter, permease component: NitT family [Ralstonia eutropha H16] Length = 301 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L + P++ +++ + L +L ++ F P AAI+AIF +W M + Sbjct: 140 LNAMTAPVISLLRPVSPLAWLPIGLLLFKAANP--------AAIWAIFICSIWPMVINTA 191 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ Sbjct: 192 VGVTRVPQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTG 251 Query: 216 GDTV 219 G + Sbjct: 252 GTGI 255 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A+++ IP G IG +++ P LL + P + Sbjct: 107 WNVLASLARVAAGFGLAALVGIPAGFLIGRFAFLNAMTAPVISLLRPVSPLAWLP--IGL 164 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + NP ++ + + W ++ N G + P D+ VA ++ W+ + ++ P Sbjct: 165 LLFKAANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFP 222 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 + PY +TG + G AW + +E+ + G TG+G ++ + +V+ + Sbjct: 223 AVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIF 276 Query: 561 IM 562 ++ Sbjct: 277 VI 278 >gi|188591095|ref|YP_001795695.1| nitrate ABC transporter transmembrane protein [Cupriavidus taiwanensis LMG 19424] gi|170937989|emb|CAP62973.1| NITRATE ABC TRANSPORTER, TRANSMEMBRANE component [Cupriavidus taiwanensis LMG 19424] Length = 296 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L + P++ +++ + L +L ++ F P AAI+AIF +W M + Sbjct: 135 LNAMTAPVISLLRPVSPLAWLPIGLLLFKAANP--------AAIWAIFICSIWPMVINTA 186 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ Sbjct: 187 VGVTRVPQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTG 246 Query: 216 GDTV 219 G + Sbjct: 247 GTGI 250 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A+++ IP G IG +++ P LL + P + Sbjct: 102 WNVLASLARVAAGFGLAALVGIPAGFVIGRFAFLNAMTAPVISLLRPVSPLAWLP--IGL 159 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + NP ++ + + W ++ N G + P D+ VA ++ W+ + ++ P Sbjct: 160 LLFKAANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFP 217 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 + PY +TG + G AW + +E+ + G TG+G ++ + +V+ + Sbjct: 218 AVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIF 271 Query: 561 IM 562 ++ Sbjct: 272 VI 273 >gi|254461331|ref|ZP_05074747.1| nitrate ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206677920|gb|EDZ42407.1| nitrate ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 277 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 16/190 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L +++ L L SR L P + +++ I L ++ + + Sbjct: 92 RVLVGYLLAALIAIPLGFLIGMSRVAHKALNPFIQVLRPISPLAWMPLALFVIQD----- 146 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +E +AIF IF +W M + + + D V+R+ L + + + +P + P Sbjct: 147 ---SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGPLKTAFTVILPAAAP 203 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 +V M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+G Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIG 256 Query: 251 VI-FLYDQLL 259 V+ L D L Sbjct: 257 VVGMLLDAAL 266 Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+V ++A++I IP+G IG + PF Q+L + PL + + Sbjct: 89 SIYRVLVGYLLAALIAIPLGFLIGMSRVAHKALNPFIQVLRPISPLAWMPLALFVIQDSE 148 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + + + +ILP P Sbjct: 149 AS-----AIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGPLKTAFTVILPAAAP 203 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 VTG + G AW + +E+ G TG+G Y+ Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 236 >gi|332140154|ref|YP_004425892.1| putative nitrate ABC transporter, permease protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550176|gb|AEA96894.1| putative nitrate ABC transporter, permease protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 331 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 16/198 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V+V IAS++ +PVGI G + I P QL + PLV VS + Sbjct: 124 SLYTVMVGFFIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 183 Query: 446 LNPNLWLSLLMIFGT-------QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + S + W L N G S D V+ +T I+ Sbjct: 184 VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPLAHLTKIV 243 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 LP P TG + G W I +E+ + + GLG ++ + + G S + Sbjct: 244 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 297 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ VL + L+R + Sbjct: 298 MVAVLTIGVIGFVLDRLM 315 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + NI +DL VS+ RL+ + +P S+P + + +S+ GW Sbjct: 206 LWPTLINTAVGVSNIDKDLINVSKVLRLTPLAHLTKIVLPSSIPMIFTGLRLSLGIGWMV 265 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + + L I+ A+LT+ + F+ D+L+ Sbjct: 266 LIAAEMLAQN------PGLGKFVWDEFQNGSSESLARIMVAVLTIGVIGFVLDRLML 316 >gi|17545099|ref|NP_518501.1| nitrate transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427389|emb|CAD13908.1| putative nitrate transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 287 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 183 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 184 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 238 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A++I IP G +G +++ P LL + P + + + Sbjct: 98 SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 155 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA +++ W+ + ++ P + PY Sbjct: 156 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 213 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G ++ + +V+ + ++ Sbjct: 214 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 267 Query: 566 VLALNRFL 573 L L + L Sbjct: 268 GLLLEQAL 275 >gi|254447035|ref|ZP_05060502.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [gamma proteobacterium HTCC5015] gi|198263174|gb|EDY87452.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [gamma proteobacterium HTCC5015] Length = 340 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 15/195 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--Y 443 +++ V ++A++I IP+GI G ++S + P Q+ + P+V VS Y Sbjct: 133 SLYTVFTGFLLAALISIPLGILCGLSEKVNSALNPLIQVFKPVSPLAWLPIVTMVVSAVY 192 Query: 444 YHLNPNLWLSLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 +P L S L + + W L N G S+ D V+ + + ++ Sbjct: 193 VSDDPMLEKSFLTSAITVTLCSLWPALINTTVGVSSISEDLINVSRVLRLKWYTKIYKVV 252 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + G W I +E+ + + GLG ++ + + GS LG Sbjct: 253 LPAAMPMMFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS--SSSLG 304 Query: 559 VLIMCCFVLALNRFL 573 +++ F + FL Sbjct: 305 RIMVAVFTIGFIGFL 319 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 12/193 (6%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 + +++ L + L S ++ L P++ + + + L +L + +Y Sbjct: 139 TGFLLAALISIPLGILCGLSEKVNSALNPLIQVFKPVSPLAWLPIVTMVVSAVYVSDDPM 198 Query: 134 AE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 E L + + +W + + +I DL VSR RL + K + + +P +MP Sbjct: 199 LEKSFLTSAITVTLCSLWPALINTTVGVSSISEDLINVSRVLRLKWYTKIYKVVLPAAMP 258 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLT 247 + + +S+ GW ++A+EM+ PG+G ++ + L I+ A+ T Sbjct: 259 MMFTGLRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSSSLGRIMVAVFT 312 Query: 248 MLGVIFLYDQLLF 260 + + FL D+++ Sbjct: 313 IGFIGFLLDRVML 325 >gi|207742226|ref|YP_002258618.1| nitrate transmembrane protein [Ralstonia solanacearum IPO1609] gi|206593614|emb|CAQ60541.1| nitrate transmembrane protein [Ralstonia solanacearum IPO1609] Length = 287 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 183 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 184 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 238 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A+++ IP G +G +++ P LL + P + + + Sbjct: 98 SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 155 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA +++ W+ + ++ P + PY Sbjct: 156 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 213 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G ++ + +V+ + ++ Sbjct: 214 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 267 Query: 566 VLALNRFL 573 L L + L Sbjct: 268 GLLLEQAL 275 >gi|153955671|ref|YP_001396436.1| ABC transporter permease [Clostridium kluyveri DSM 555] gi|219856045|ref|YP_002473167.1| hypothetical protein CKR_2702 [Clostridium kluyveri NBRC 12016] gi|146348529|gb|EDK35065.1| Predicted ABC transporter, permease protein [Clostridium kluyveri DSM 555] gi|219569769|dbj|BAH07753.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 260 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 21/196 (10%) Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I+ YQ LY CI +F L + ++I+ G IG + I P +L Sbjct: 59 IIQKEFYQHALY----SCIRIFIGCTLALPIAVIF---GFLIGLTKFGENFILPIFDMLR 111 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVAS 484 P + P+ + + P++ S++ I G + IL N IAG A + E A Sbjct: 112 PIPQIAWIPIAI------LIFPSVEGSIIFITFLGAFFPILVNTIAGTQAANSLLIEAAK 165 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S + W+ RY+ P P TG G +W + I +E+ S + G+G Y Sbjct: 166 SMSASKWQLIRYVSFPSAVPNIFTGLTIGIGSSWMSVIAAEMISGKY------GIGYYTW 219 Query: 545 ESTEKGSFPEVVLGVL 560 S +PE ++G++ Sbjct: 220 TSYTLMQYPETIIGMI 235 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/207 (20%), Positives = 92/207 (44%), Gaps = 16/207 (7%) Query: 13 RRIFPNIFDLLAFVLV------IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 ++I +F +L F++V + I L+ G P D+ + + Q+A Sbjct: 12 KKILCKVFSILVFIIVWQLLVNLNIKRPLMFG--NLPSPLDVFQTLKTIIIQKEFYQHAL 69 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + +R+ ++L ++ L ++ ++PI D+++ IP + ++ ++ F ++ Sbjct: 70 YSCIRIFIGCTLALPIAVIFGFLIGLTKFGENFILPIFDMLRPIPQIAWIPIAILIFPSV 129 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + L A F I + T + Q+ ++ L E ++S S WQ Y+ P Sbjct: 130 EGSIIFITFLGAFFPILVN-----TIAGTQAANSL---LIEAAKSMSASKWQLIRYVSFP 181 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++P + + + + W V+A+EMI Sbjct: 182 SAVPNIFTGLTIGIGSSWMSVIAAEMI 208 >gi|299068062|emb|CBJ39276.1| nitrate ABC transporter [Ralstonia solanacearum CMR15] Length = 283 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 180 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A++I IP G +G +++ P LL + P + + + Sbjct: 94 SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA +++ W+ + ++ P + PY Sbjct: 152 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 209 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G ++ + +V+ + ++ Sbjct: 210 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 263 Query: 566 VLALNRFL 573 L L + L Sbjct: 264 GLLLEQAL 271 >gi|83746841|ref|ZP_00943888.1| NrtB [Ralstonia solanacearum UW551] gi|83726426|gb|EAP73557.1| NrtB [Ralstonia solanacearum UW551] Length = 283 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 128 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 179 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 180 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 234 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A+++ IP G +G +++ P LL + P + + + Sbjct: 94 SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA +++ W+ + ++ P + PY Sbjct: 152 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 209 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G ++ + +V+ + ++ Sbjct: 210 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 263 Query: 566 VLALNRFL 573 L L + L Sbjct: 264 GLLLEQAL 271 >gi|94309221|ref|YP_582431.1| nitrate transport permease [Cupriavidus metallidurans CH34] gi|93353073|gb|ABF07162.1| ABC-type transporter, permease component: NitT family [Cupriavidus metallidurans CH34] Length = 303 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 8/124 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L + P++ +++ + L +L ++ F P AAI+AIF +W M + Sbjct: 142 LNAMASPVISLLRPVSPLAWLPIGLLLFKAANP--------AAIWAIFICSIWPMIINTA 193 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P+D V+R LS W+ F ++ P +P ++ + +S+ W +VA+EM+ Sbjct: 194 VGVTRVPQDYLNVARVLDLSEWKIFRHVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTG 253 Query: 216 GDTV 219 G + Sbjct: 254 GTGI 257 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A+++ IP G +G +++ P LL + P + + + Sbjct: 114 SLARVAAGFGLAAVVGIPAGFLLGRFAFLNAMASPVISLLRPVSPLAWLP--IGLLLFKA 171 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA ++ W+ +R+++ P + PY Sbjct: 172 ANPAAIWAIFIC--SIWPMIINTAVGVTRVPQDYLNVARVLDLSEWKIFRHVLFPAVLPY 229 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +TG + G AW + +E+ + G TG+G ++ + +V+ + I+ Sbjct: 230 MLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIFII 280 >gi|299769519|ref|YP_003731545.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter sp. DR1] gi|298699607|gb|ADI90172.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter sp. DR1] Length = 279 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L +I V+A S+ L P ++SIP L ++ +++ Sbjct: 86 STWRVLLGFIIGSGLGLVFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+ + A F +T+ V ++ N+ R L EV + +RL+ +Q+ + +P Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDRKLIEVGKVYRLNAFQRIISIILPA 197 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + PG++ + S+S W F++A+E+I Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 25/179 (13%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +RV++ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 85 ISTWRVLLGFIIGSGLGLVFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL------ 138 Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LWL + L+ G + N +A EV + + ++ I Sbjct: 139 -----LWLGIDEGSKITLIAIGAFFPTYTNTVAAIHNVDRKLIEVGKVYRLNAFQRIISI 193 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ILP P +TG + +W I +E+ + T G+G +++ E S P++V Sbjct: 194 ILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRET-SRPDIV 245 >gi|331702032|ref|YP_004398991.1| ABC transporter integral membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329129375|gb|AEB73928.1| ABC-type transporter, integral membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 283 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 25/177 (14%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 ++T +L++ +I+L+ AKS+ ++ PILD MQ++P +L V +F Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSKVFAVINKPILDFMQTMPAFVYLIPAVAFF-- 151 Query: 126 LYPGKVIGAELAAIFAIF-TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ T ++ N+ + +P DL E + S+ +GWQK + + Sbjct: 152 -GIGMVPGVIASVIFAMPPTVRMTNL------GIRQVPNDLIEAADSYGSTGWQKLFKVQ 204 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ +MM+S+S M+V+ ++I G+G+ + A+ D Sbjct: 205 LPLAKSTLMAGVNQSMMLSLS----------MVVIA-SMIGAMGLGNKVYFAVGRND 250 >gi|207727822|ref|YP_002256216.1| nitrate transmembrane protein [Ralstonia solanacearum MolK2] gi|206591063|emb|CAQ56675.1| nitrate transmembrane protein [Ralstonia solanacearum MolK2] Length = 287 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI+AIF +W M + + + Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFKSANP--------AAIWAIFICSIWPMVINTAVGVTRV 183 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 184 PQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 238 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A+++ IP G +G +++ P LL + P + + + Sbjct: 98 SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLP--IGLLLFKS 155 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G + P D+ VA +++ W+ + ++ P + PY Sbjct: 156 ANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPY 213 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G ++ + +V+ + ++ Sbjct: 214 MLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIVIAIFVIGVV 267 Query: 566 VLALNRFL 573 L L + L Sbjct: 268 GLLLEQAL 275 >gi|152986057|ref|YP_001346556.1| taurine ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150961215|gb|ABR83240.1| probable permease of ABC taurine transporter [Pseudomonas aeruginosa PA7] Length = 272 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + A + IP+G+ +G P + + P + P + PL+V Sbjct: 84 SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 143 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L +F +L AG + + W+ RY+ILP P Sbjct: 144 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 199 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G W+ + +E+ + GLG + + + + VV+G+L++ Sbjct: 200 VLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDVVVVGILLIAAV 253 Query: 566 VLALN 570 LA Sbjct: 254 ALAFE 258 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 76 SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 135 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++F IG EL+ + I+ + + + + + R + R S WQ Sbjct: 136 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 187 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y+ +P ++P ++ + +++ GW +VA+E+I Sbjct: 188 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 221 >gi|332666518|ref|YP_004449306.1| ABC-type transporter, integral membrane subunit [Haliscomenobacter hydrossis DSM 1100] gi|332335332|gb|AEE52433.1| ABC-type transporter, integral membrane subunit [Haliscomenobacter hydrossis DSM 1100] Length = 334 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%) Query: 385 ITMFRVV-VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 IT + V V + AS + +P+G+ G +I + + P Q+L + P+V VS Sbjct: 131 ITSLKTVFVGFLFASFLALPIGVICGANKNIMTALNPIIQVLKPVSPLAWLPIVTMIVSA 190 Query: 444 YHLNPNLWLSLLMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ + +LS I + W L N G ++ D+ VA ++ + Sbjct: 191 VYVTNDGFLSKSFIISAVTVAMCSLWATLINTAVGVASVNKDYLNVAQVLQLSPSQRIFK 250 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFP 553 +ILP P TG G W I +E+ + + GLG +I + + G S Sbjct: 251 VILPATLPMIFTGLRITLGVGWMVLIAAEMMA------QNPGLGKFIWDEFQNGSSDSIA 304 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++ VL + AL+R + Sbjct: 305 RIMVAVLTIGLIGYALDRLM 324 >gi|124266117|ref|YP_001020121.1| ABC transporter permease [Methylibium petroleiphilum PM1] gi|124258892|gb|ABM93886.1| ABC transporter permease protein [Methylibium petroleiphilum PM1] Length = 258 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 10/176 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV +A+ + +P+G+++G+ + P + L P + PL + S P Sbjct: 64 RVATAFFLATGLGVPLGLFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFSGTE-TP 122 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++L+ L F + N + G + + A + W+ +R +I+PG PY T Sbjct: 123 VIFLTFLASF---FATALNTMLGVESIDESYSRAAYCLGASKWQVFREVIVPGSMPYIFT 179 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G + G AW + + E+ S G GLG I S +P +V+G++ + Sbjct: 180 GLQISVGVAWFSLVAGEMVS-GEF-----GLGYVINTSYTMVQYPTIVIGMVTLGA 229 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI + ++ IPIL ++ ++ F G E IF F + + + + +I Sbjct: 95 PIFETLRPIPILAWVPLAILMFS--------GTETPVIFLTFLASFFATALNTMLGVESI 146 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + S WQ F + VP SMP + + +S+ WF +VA EM+ Sbjct: 147 DESYSRAAYCLGASKWQVFREVIVPGSMPYIFTGLQISVGVAWFSLVAGEMV 198 >gi|70730546|ref|YP_260287.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344845|gb|AAY92451.1| ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 254 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 10/168 (5%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+G+ +G H+ + P Q L + P+VV + P + L+ F W Sbjct: 84 PLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALW 139 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 IL N AG + +++ S T W R +ILPG+ + +TG + G W + Sbjct: 140 PILLNTAAGVRQLDPRWLQLSRSLSATRWETLRKVILPGVLGHVLTGVRLSIGILWIVLV 199 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 E+ + GLG +I ++ ++ ++ E++ VL++ AL+ Sbjct: 200 PCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLIGVLGFALD 241 >gi|254241178|ref|ZP_04934500.1| hypothetical protein PA2G_01867 [Pseudomonas aeruginosa 2192] gi|126194556|gb|EAZ58619.1| hypothetical protein PA2G_01867 [Pseudomonas aeruginosa 2192] Length = 283 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 23/203 (11%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 HSL R L L A+ +++ FV S L L P + +++ I L ++ Sbjct: 93 AHSL----GRVALGYLIALAVAIPLGFVIGM----SPLLYQALNPFIQVLKPISPLAWMP 144 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 + + + ++A+F IF +W M + + + +D V+R+ +S Sbjct: 145 IALYTIRD--------SSVSAVFVIFICSIWPMLINTAFGVAGVRKDWLNVARTLEVSPL 196 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +K + + +P + P ++ M +SM W +VA+EM++ G GIG ++ Sbjct: 197 RKAFCVILPAAAPTIITGMRISMGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLS 250 Query: 238 LLAILYAMLTMLGVIFLYDQLLF 260 L +++A+L M+GVI + LLF Sbjct: 251 LANVIFAVL-MIGVIGMLLDLLF 272 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +IA + IP+G IG P + + PF Q+L PL ++ Y Sbjct: 95 SLGRVALGYLIALAVAIPLGFVIGMSPLLYQALNPFIQVLKPIS-----PLAWMPIALYT 149 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++ +IF + W +L N G + D+ VA + ++ R +ILP P Sbjct: 150 IRDSSVSAVFVIFICSIWPMLINTAFGVAGVRKDWLNVARTLEVSPLRKAFCVILPAAAP 209 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V+ VL++ Sbjct: 210 TIITGMRISMGIAWLVIVAAEMLIGG------TGIGYFVWNEWNNLSLANVIFAVLMIGV 263 Query: 565 FVLALN 570 + L+ Sbjct: 264 IGMLLD 269 >gi|253730527|ref|ZP_04864692.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725667|gb|EES94396.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 253 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVGGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L ++ + I+FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 ----GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|295703658|ref|YP_003596733.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium DSM 319] gi|294801317|gb|ADF38383.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus megaterium DSM 319] Length = 287 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 22/178 (12%) Query: 65 ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 AS TL + L++ +ISLLF L+ + ++G V+ PILDIMQ++P +L +V+ F Sbjct: 93 ASMLTLSLVLASTIISLLFGVPLGILSHRFNKVGAVIKPILDIMQTMPAFVYLIPSVLLF 152 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC---NIPRDLEEVSRSFRLSGWQKF 180 L + A+ + ++ M ++ +L +P+ E + +F + WQK Sbjct: 153 -----------GLGNVTALIATFIFAMPPAVRLTLLGLQQVPQTTLEAAEAFGATEWQKL 201 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++P M MSG ++ S +VV +++ G+G+ + +I D+ Sbjct: 202 IKVQLPLALP-------MIMSGVNQVIMLSLSMVVISSMVGAGGLGAEVLRSISMLDV 252 >gi|169629549|ref|YP_001703198.1| putative sulfonate ABC transporter, permease [Mycobacterium abscessus ATCC 19977] gi|169241516|emb|CAM62544.1| Putative sulfonate ABC transporter, permease [Mycobacterium abscessus] Length = 274 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 10/186 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++R+++ + +A++I +P G+ +G +P Q L + P+ V+ Sbjct: 82 ISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTPIAVAVFGIG 141 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 N + L+ W IL N AG + + VA SFH T +ILP I Sbjct: 142 ----NQPVVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFHATRSEVLTAVILPAIRG 197 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + TG A G AW + +E+ + +R +GLG + + ++ ++ +VV +L++ Sbjct: 198 HIQTGIRVALGVAWVVLVPAEM-----LGVR-SGLGYQVLNARDQLAYDQVVAVILVIGI 251 Query: 565 FVLALN 570 AL+ Sbjct: 252 LGYALD 257 >gi|91774682|ref|YP_544438.1| nitrate transport permease [Methylobacillus flagellatus KT] gi|91708669|gb|ABE48597.1| nitrate transport permease [Methylobacillus flagellatus KT] Length = 295 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ I++ + L +L ++ F A+ AAI+ IF S +W M + + + Sbjct: 142 PVIGILRPVSPLAWLPIGLLVFK--------AADPAAIWVIFISAIWPMIINTAVGVSKV 193 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + PF +P ++ + +S+ W +VA+EM+ G Sbjct: 194 PQDYMNVARVLNLSEWKIITKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 248 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG IS P +L + P + + + Sbjct: 108 SLQRVALGFGLAALVGIPLGFVIGRFQFISRMAAPVIGILRPVSPLAWLP--IGLLVFKA 165 Query: 446 LNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +P +W+ + W ++ N G S P D+ VA +++ W+ I+ P + P Sbjct: 166 ADPAAIWV---IFISAIWPMIINTAVGVSKVPQDYMNVARVLNLSEWKIITKILFPFVLP 222 Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530 Y +TG + G AW + +E+ + G Sbjct: 223 YMMTGVRLSIGVAWLVIVAAEMLTGG 248 >gi|149926963|ref|ZP_01915221.1| possible nitrate transport system permease protein [Limnobacter sp. MED105] gi|149824184|gb|EDM83404.1| possible nitrate transport system permease protein [Limnobacter sp. MED105] Length = 282 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV+V +A+++ IP+G IG P + + PF Q+L + PL + Y Sbjct: 94 SIFRVLVGFGLAALVAIPLGFVIGMSPLLYKALDPFIQILKPVSPLAWMPL-----ALYT 148 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++ +IF + W +L N G + D+ VA + ++ R +ILP P Sbjct: 149 IQDSDTSAIFVIFICSIWPMLVNTAFGVAGVRRDWLNVAKTLEVSSLRTAFQVILPAAAP 208 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S ++ +L + Sbjct: 209 TIMTGMRISVGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIANIISAILFIGL 262 Query: 565 FVLALNRFL 573 + L+ L Sbjct: 263 IGMLLDTLL 271 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ +AIF IF +W M + + + RD V+++ +S + + + +P + P ++ Sbjct: 152 SDTSAIFVIFICSIWPMLVNTAFGVAGVRRDWLNVAKTLEVSSLRTAFQVILPAAAPTIM 211 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ + I+ A+L + + Sbjct: 212 TGMRISVGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIANIISAILFIGLIGM 265 Query: 254 LYDQLLFR 261 L D LL R Sbjct: 266 LLDTLLAR 273 >gi|167034348|ref|YP_001669579.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166860836|gb|ABY99243.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 251 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 13/162 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + LR S + I ++ L A S ++ P+ ++ +P+LG++ ++ N Sbjct: 59 SLLRTCSGLAIGIVGGVGLGALMALSAPANRLIAPLFHALRQVPMLGWIPLIALWLGNGE 118 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K++ LAA++ M + ++SL + E ++ LS WQ+ W + +P Sbjct: 119 GAKLLIVSLAALYP--------MVLNTFESLRQVTAQHREAAQVLMLSRWQQLWLILLPA 170 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 ++PG+ ++ +++ W V SE+ + G+GS + Sbjct: 171 ALPGIAAGVLQALAFAWVTSVGSELFLSAGA-----GLGSLM 207 >gi|21666014|gb|AAM73542.1|AF283498_2 nitrate transporter integral membrane protein [Azospirillum brasilense] Length = 363 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 15/186 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY--YHLNPNLWL 452 ++ +++ +P+G+ G +++ + P Q+ + PLV VS NP Sbjct: 168 LLGALVAVPLGVACGLSRTVNAAMNPLIQIFKPVSPLAWLPLVTMVVSATVSSDNPTFEK 227 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 S L + + W L N G S+ D V ++G R ++LP PY Sbjct: 228 SFLTSAVTVTLCSLWPTLINTAVGVSSIDKDLMNVGKVLQLSGPTMVRRLVLPSALPYIF 287 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 288 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSS--LARIMVAVFTI 339 Query: 568 ALNRFL 573 L FL Sbjct: 340 GLIGFL 345 >gi|224824744|ref|ZP_03697851.1| binding-protein-dependent transport systems inner membrane component [Lutiella nitroferrum 2002] gi|224603237|gb|EEG09413.1| binding-protein-dependent transport systems inner membrane component [Lutiella nitroferrum 2002] Length = 255 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 24/192 (12%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RVVV + + + +P+G+ +G P + P QLL P + PL + Sbjct: 62 SLYRVVVGFVAGAALALPLGLTMGSSPRLYGLFNPMLQLLRPIPPIAYIPLAI------- 114 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW L L+ G + +L N I+G + A + + + ++ Sbjct: 115 ----LWFGLGNPPSVFLIAIGAFFPVLMNTISGVRHVDGIYLRAARNLGVGRLALFTRVM 170 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY +TG G A+ IVSE+ + GLG I E+ E +++ G Sbjct: 171 LPAATPYILTGVRIGIGTAFIVVIVSEMIAV------NDGLGYRILEAREFMWSDKIIAG 224 Query: 559 VLIMCCFVLALN 570 ++ + LAL+ Sbjct: 225 MITIGLLGLALD 236 >gi|150005778|ref|YP_001300522.1| glycine betaine/L-proline transport system permease [Bacteroides vulgatus ATCC 8482] gi|294776156|ref|ZP_06741645.1| ABC transporter, permease protein [Bacteroides vulgatus PC510] gi|149934202|gb|ABR40900.1| glycine betaine/L-proline transport system permease [Bacteroides vulgatus ATCC 8482] gi|294449979|gb|EFG18490.1| ABC transporter, permease protein [Bacteroides vulgatus PC510] Length = 274 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ +I+L+ +A S+R +L PILD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTIIALIMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P+++ E SRSF + Q + + +P Sbjct: 144 GLGTVPGAFATIIFAM--PPVVRLT---SLGIKQVPKNVVEASRSFGATPMQLLFKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 ++P G+ ++MS+S VV + MI G Sbjct: 199 LALPTIMTGINQTILMSLS----MVVIAAMIAAGG 229 >gi|323493097|ref|ZP_08098229.1| nitrate ABC transporter permease protein [Vibrio brasiliensis LMG 20546] gi|323312658|gb|EGA65790.1| nitrate ABC transporter permease protein [Vibrio brasiliensis LMG 20546] Length = 322 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS- 453 ++A+ I IP+GI +G P QLL + P+V VS +++ + + Sbjct: 124 LLATAIAIPLGIVLGLNQGAYQAFNPIIQLLKPVSPLAWLPIVTMVVSATYVSDDPLFAK 183 Query: 454 ------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 L + + W L N G ++ D V+ ++ W+ R I+LP P Sbjct: 184 SFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIF 243 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G AW I +E+ + + GLG ++ + + GS Sbjct: 244 TGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 281 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +DL VS+ +LS WQ + +P ++P + + +S+ W Sbjct: 197 LWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMV 256 Query: 207 VVASEMIVVGDTVIPLPGIGSYI 229 ++A+EM+ PG+G ++ Sbjct: 257 LIAAEMLAQN------PGLGKFV 273 >gi|294498309|ref|YP_003562009.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium QM B1551] gi|294348246|gb|ADE68575.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus megaterium QM B1551] Length = 287 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 22/178 (12%) Query: 65 ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 AS TL + L++ +ISLLF L+ + ++G V+ PILDIMQ++P +L +V+ F Sbjct: 93 ASMLTLSLVLASTIISLLFGVPLGILSHRFNKVGAVIKPILDIMQTMPAFVYLIPSVLLF 152 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC---NIPRDLEEVSRSFRLSGWQKF 180 L + A+ + ++ M ++ +L +P+ E + +F + WQK Sbjct: 153 -----------GLGNVTALIATFIFAMPPAVRLTLLGLQQVPQTTLEAAEAFGATEWQKL 201 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++P M MSG ++ S +VV +++ G+G+ + +I D+ Sbjct: 202 IKVQLPLALP-------MIMSGVNQVIMLSLSMVVISSMVGAGGLGAEVLRSISMLDV 252 >gi|83589331|ref|YP_429340.1| binding-protein dependent transport system inner membrane protein [Moorella thermoacetica ATCC 39073] gi|83572245|gb|ABC18797.1| Binding-protein-dependent transport systems inner membrane component [Moorella thermoacetica ATCC 39073] Length = 262 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 10/176 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ FRV ++A+ I +P+GI +G + + +P PA+ F PL + +S + Sbjct: 69 ISFFRVTTGFLLAAAIGVPLGILMGSLKVVEAFFEPLLAFFRYMPASAFIPLTIIWLSIF 128 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + IF + ++ V+ P D + A + +R +ILP P Sbjct: 129 E-TQKIGVVFIGIF---FQLVLMVMDVTHNVPQDLIDTAYTLGARPLEVFRRVILPAALP 184 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 + A G AW IV+E+ + ++GLG I + + S P++ +G+L Sbjct: 185 GIMDTLRVALGWAWTYVIVAELVA------ASSGLGFLIMNAGRQLSTPDMFVGIL 234 >gi|46203697|ref|ZP_00051132.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 193 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 16/155 (10%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 I+ +++ IP L ++ F +++F + P AA+F I W + F+ ++ + Sbjct: 39 IVRLLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAVGVFWIVFFATQGAVRGVD 90 Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 RDL EV+++F G W + + +P + PG++ + ++ W VVA+E+ V Sbjct: 91 RDLIEVAKAFGFRGAWPRLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 144 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 PGIG+ + A ++ MLTM + L+D Sbjct: 145 -PGIGARMMQASSLLSTDIVVVYMLTMAALYGLFD 178 >gi|313904100|ref|ZP_07837480.1| binding-protein-dependent transport systems inner membrane component [Eubacterium cellulosolvens 6] gi|313471249|gb|EFR66571.1| binding-protein-dependent transport systems inner membrane component [Eubacterium cellulosolvens 6] Length = 279 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 24/184 (13%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RV++ +I+S++ I +GI IG H Q+L P + PLV+ Sbjct: 88 AISIRRVLLGYLISSVLGIVLGILIGLSRHAQRLTGLLIQVLRPIPPIAWIPLVI----- 142 Query: 444 YHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 LW+ + L+ G + +L NVI G EVA +++ Sbjct: 143 ------LWMGIGENSKVFLIFLGGFFTVLINVIDGIRYTDKKLTEVAWVMETPKFKYITR 196 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++P P TG A G W + +E+ + T+G+G I+ + G V+ Sbjct: 197 LVIPAALPSIFTGLKVALGSCWTCVVAAELVA------STSGIGYMISNARNFGQMDVVI 250 Query: 557 LGVL 560 +G+L Sbjct: 251 VGML 254 >gi|260654834|ref|ZP_05860322.1| ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] gi|260630549|gb|EEX48743.1| ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] Length = 256 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 10/169 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT+ RV A +I +PVG+ +G+ + P+ + P + PL + ++ Sbjct: 59 ITLTRVFTGCAFAIMIGLPVGLLMGYSRTALVALSPYVNSIRQVPIMAWVPL---SIIWF 115 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L + ++ + IL N I+G ++K A W+ R ++LPG P Sbjct: 116 GLGDGPTI-FMITMSAVFPILINTISGVMNIDPNYKNAARCMGAKTWQVMRDVVLPGALP 174 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 ++TG A G AW + I +E + +TG G + E+ + P Sbjct: 175 NFLTGCRLALGSAWMSVICAEFIA------TSTGFGYIMVEAQVRMQTP 217 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 19/206 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ + +++ L SR + L P ++ ++ +PI+ ++ ++++F L Sbjct: 60 TLTRVFTGCAFAIMIGLPVGLLMGYSRTALVALSPYVNSIRQVPIMAWVPLSIIWF-GLG 118 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G I F I S V+ + + + NI + + +R WQ + +P Sbjct: 119 DGPTI-------FMITMSAVFPILINTISGVMNIDPNYKNAARCMGAKTWQVMRDVVLPG 171 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + +++ W V+ +E I G G YI + + + +LYA++ Sbjct: 172 ALPNFLTGCRLALGSAWMSVICAEFIATST------GFG-YIMVEAQVRMQTPLLYALMI 224 Query: 248 MLGVI-FLYDQ---LLFRPMIVWSNK 269 M ++ F DQ LL R + W K Sbjct: 225 MSALVGFAIDQSIVLLERCLTGWRYK 250 >gi|13471315|ref|NP_102884.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099] gi|14022060|dbj|BAB48670.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099] Length = 259 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 32/235 (13%) Query: 360 AWQSIGYIVNHFTYQDVLYVI------------WLG-CITMFRVVVLIIIASIIWIPVGI 406 AW ++G VN D L ++ WL IT++RV ++AS++ +P+GI Sbjct: 30 AWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDILITIWRVFGGFVLASVVAVPIGI 89 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYIL 465 +G + + ++PF PA+ F PL++ L LL+IF G+ + I+ Sbjct: 90 AMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELE-----KLLVIFVGSVFQII 144 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 V + D E A + T + +I+P P G AW IV+E Sbjct: 145 LIVAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPANAPEIAETLRLVLGWAWTYVIVAE 204 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL-------ALNRFL 573 + ++G+G I S + + +++ G++++ L A NR+L Sbjct: 205 LIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSDFAFKAFNRWL 253 >gi|317047581|ref|YP_004115229.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316949198|gb|ADU68673.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 261 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 24/192 (12%) Query: 93 SRRLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + RLG L+ + +++++P L + +++F K+ L +F I+ Sbjct: 87 TSRLGERLLDTSVQMLRNVPHLALIPLVILWFGIDEAAKIFLVALGTLFPIY-------- 138 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + Y + NI R L E++RS+ LSGW F + +P ++P ++ + ++ W Sbjct: 139 LNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPSIMVGVRFALGLMWL------ 192 Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIV 265 ++V +T+ GIG Y+A+ +E D++ ILYA+L L + QLL R + Sbjct: 193 TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--AAQLLERVWLR 249 Query: 266 WSNKFRLERTTG 277 W ++L+ Sbjct: 250 WHPAYQLKEANA 261 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++GW + +ILPG P + G A Sbjct: 128 LVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPSIMVGVRFAL 187 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571 G W IV+E S +G+G Y+A + + +VV+ +I+ + L Sbjct: 188 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVAA 240 Query: 572 -------FLWHPLY 578 WHP Y Sbjct: 241 QLLERVWLRWHPAY 254 >gi|222102562|ref|YP_002539601.1| sulfate ester transporter permease protein [Agrobacterium vitis S4] gi|221739163|gb|ACM39896.1| sulfate ester transporter permease protein [Agrobacterium vitis S4] Length = 261 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 23/217 (10%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 T R+I+D + L + LR LS I + + TL ++ +++P Sbjct: 53 TAKREILD--------NGLAGELGASLLRNLSGFGIGAVLGISFGTLVVLTKLGERLVMP 104 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + ++ I +L ++ ++F K++ LAA I + + + +P Sbjct: 105 TFNGLKQISLLAWIPLISIWFGFGEQAKIVFVALAAFIPI--------ALNTFDGIRQVP 156 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE-MIVVGDTVIP 221 RDL EV R+ R S Q+ + + +P ++P + + + + W V +E + VG Sbjct: 157 RDLIEVGRALRFSPRQRIFTIYLPSALPMIATGVHLGLIYSWLATVGAEYFLAVG----- 211 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 PGIG + + D+ ++ ++ + V F++++L Sbjct: 212 -PGIGGLVIAGRERFDMSLVMVGVIILGLVGFIFNRL 247 >gi|307151303|ref|YP_003886687.1| binding-protein-dependent transporter inner membrane component [Cyanothece sp. PCC 7822] gi|306981531|gb|ADN13412.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7822] Length = 265 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 11/186 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT++RV++ II S++ +G G+ I + P Q L P+ + PL + + Y Sbjct: 72 ITLYRVILGFIIGSVMGTILGALTGYSEQIHDFLDPLLQSLRNIPSLAWVPLFILWMGIY 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L+ G + + N+++G + EV + ++ ++ R I P P Sbjct: 132 ETSK----VALIAVGVFFPVYLNLMSGVKSVERKLVEVGKVYRLSNFQLIRRIFFPATLP 187 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y G + G W + +E+ + GLG + + G P ++L +++ Sbjct: 188 AYFVGLRSGLGLGWMFVVAAEIMG------SSQGLGFLLVDGQTTGR-PTIILASILLFA 240 Query: 565 FVLALN 570 + L Sbjct: 241 LLGKLT 246 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/169 (20%), Positives = 76/169 (44%), Gaps = 8/169 (4%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P +++ + L + T R++ +I + + L S ++ L P+L Sbjct: 50 PSKVIETIWTLASSGELFHHIGITLYRVILGFIIGSVMGTILGALTGYSEQIHDFLDPLL 109 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 +++IP L ++ +++ M +Y E + + I + + ++ + ++ R Sbjct: 110 QSLRNIPSLAWVPLFILW-MGIY-------ETSKVALIAVGVFFPVYLNLMSGVKSVERK 161 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L EV + +RLS +Q + P ++P + + GW FVVA+E++ Sbjct: 162 LVEVGKVYRLSNFQLIRRIFFPATLPAYFVGLRSGLGLGWMFVVAAEIM 210 >gi|192360346|ref|YP_001980534.1| putative nitrate transport system permease [Cellvibrio japonicus Ueda107] gi|190686511|gb|ACE84189.1| possible nitrate transport system permease protein [Cellvibrio japonicus Ueda107] Length = 275 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 7/119 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E +AIF IF +W M + + N+ D V+R+ LS + + + +P + P ++ Sbjct: 145 SETSAIFVIFICSIWPMLLNTAFGVANVREDWINVARTHELSPLRTAFTVILPAAAPTIL 204 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+G++ Sbjct: 205 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGLV 256 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ +A I IPVG IG P + + P+ Q+L + PL + + Sbjct: 87 SIYRVLTGFSLALFIAIPVGFLIGMSPLMYRALNPYIQVLRPISPLAWMPLALFIIKDSE 146 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + ++ R +ILP P Sbjct: 147 TS-----AIFVIFICSIWPMLLNTAFGVANVREDWINVARTHELSPLRTAFTVILPAAAP 201 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +TG + G AW + +E+ G TG+G Y+ Sbjct: 202 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 234 >gi|254882041|ref|ZP_05254751.1| binding-protein-dependent transport system inner membrane component [Bacteroides sp. 4_3_47FAA] gi|319640951|ref|ZP_07995659.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_1_40A] gi|254834834|gb|EET15143.1| binding-protein-dependent transport system inner membrane component [Bacteroides sp. 4_3_47FAA] gi|317387396|gb|EFV68267.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_1_40A] Length = 274 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ +I+L+ +A S+R +L PILD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTIIALIVGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P+++ E SRSF + Q + + +P Sbjct: 144 GLGTVPGAFATIIFAM--PPVVRLT---SLGIKQVPKNVVEASRSFGATPMQLLFKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 ++P G+ ++MS+S VV + MI G Sbjct: 199 LALPTIMTGINQTILMSLS----MVVIAAMIAAGG 229 >gi|163789949|ref|ZP_02184385.1| hypothetical protein CAT7_06938 [Carnobacterium sp. AT7] gi|159874889|gb|EDP68957.1| hypothetical protein CAT7_06938 [Carnobacterium sp. AT7] Length = 249 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 18/178 (10%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++R+++ I+I+ +I +P+GIWIG + P L+ P F P+ + Y Sbjct: 58 SLYRILMAILISFLIGVPLGIWIGASKWADRLLSPLVYLIYPIPKVAFLPVFMLL---YG 114 Query: 446 LNPNLWLSLLMIFGTQWYILFNVI----AGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 L +SL++ W I+F +I G S + +V H + W+ + Y++ P Sbjct: 115 LGDASKISLVV-----WIIVFQLILSVRDGISQIDRSYYQVMRMMHASKWQTFIYLLCPA 169 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 I P ++G + C G AS+ + + GLG YI + + E+ G+ Sbjct: 170 IIPQIISG-LRVCIGIAIASLF-----FAENYATKYGLGYYIMNAWSVIDYSEMFCGI 221 >gi|73540035|ref|YP_294555.1| nitrate transport permease [Ralstonia eutropha JMP134] gi|72117448|gb|AAZ59711.1| Nitrate transport permease [Ralstonia eutropha JMP134] Length = 300 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 8/118 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F P AAI+AIF +W M + + + Sbjct: 145 PVISLLRPVSPLAWLPIGLLLFKAANP--------AAIWAIFICSIWPMVINTAVGVTRV 196 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 P+D V+R LS W+ F + P +P ++ + +S+ W +VA+EM+ G + Sbjct: 197 PQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGGTGI 254 Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV +A++I IP G +G +++ P LL + P + Sbjct: 104 VGWNVLASLARVGAGFGLAALIGIPAGFILGRFAFLNAMASPVISLLRPVSPLAWLP--I 161 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + NP ++ + + W ++ N G + P D+ VA ++ W+ + ++ Sbjct: 162 GLLLFKAANPAAIWAIFIC--SIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVL 219 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 P + PY +TG + G AW + +E+ + G TG+G Sbjct: 220 FPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------TGIG 255 >gi|115526626|ref|YP_783537.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] gi|115520573|gb|ABJ08557.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] Length = 279 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ +IA + IP+G IG P ++ + PF Q+L + PL + + Sbjct: 91 SIARVMIGYLIAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSG 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N G ++ ++ VA + + R +ILP P Sbjct: 151 LS-----AIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V++ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILMIGV 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMLLDQIL 268 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 8/127 (6%) Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 L+AIF IF VW M + + ++ ++ V+R+ + ++ + + +P + P ++ Sbjct: 151 LSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAPTILTG 210 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FL 254 M +S+ W +VA+EM+V G GIG ++ + ++ A+L M+GV+ L Sbjct: 211 MRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAIL-MIGVVGML 263 Query: 255 YDQLLFR 261 DQ+L R Sbjct: 264 LDQILAR 270 >gi|266619062|ref|ZP_06111997.1| ABC transporter, permease protein, cysTW family [Clostridium hathewayi DSM 13479] gi|288869429|gb|EFD01728.1| ABC transporter, permease protein, cysTW family [Clostridium hathewayi DSM 13479] Length = 255 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 5/115 (4%) Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P + ++P L+ + P F L + + +L+ ++++ L++F I N I+G Sbjct: 85 PFLKDLLEPVMVLVKSVPVASFVILALIWIGSKNLS--VFIAFLVVFPM---IYVNTISG 139 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 ++ E+A FH++GW+ +RYI P + PY + GA + G ++ + I +EV Sbjct: 140 LNSADAQLLEMAGVFHMSGWKKFRYIYWPALLPYLINGAAISLGMSFKSGIAAEV 194 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P++ +++S+P+ F+ +++ IG++ ++F F + + L Sbjct: 90 LLEPVMVLVKSVPVASFVILALIW---------IGSKNLSVFIAFLVVFPMIYVNTISGL 140 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + L E++ F +SGW+KF Y+ P +P L+ +S+ + +A+E+I V D Sbjct: 141 NSADAQLLEMAGVFHMSGWKKFRYIYWPALLPYLINGAAISLGMSFKSGIAAEVIGVPDH 200 Query: 219 VI 220 I Sbjct: 201 SI 202 >gi|261415486|ref|YP_003249169.1| binding-protein-dependent transport systems inner membrane component [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371942|gb|ACX74687.1| binding-protein-dependent transport systems inner membrane component [Fibrobacter succinogenes subsp. succinogenes S85] Length = 254 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 18/191 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ ++V A+++ I +GI G P + + ++P ++ A P NV+ P ++ + ++ Sbjct: 63 SLLKLVPAYFAAAVVGISLGIVSGSVPWVGTMLKPISRFAAPIPPNVYIPYAIAILPTFY 122 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW-WRYII---LPG 501 L+ + ++ W I N AGA+ P ++ A+ I + + WR LP Sbjct: 123 LSS----TFIIFIAAFWPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRIAFVASLPS 178 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 IF +G G ++ V+E + TGLG ++ + +P +V G+L Sbjct: 179 IF----SGLSVGMGLSFIMLTVAE------LFGENTGLGHFVQFYADYSDYPNMVAGILW 228 Query: 562 MCCFVLALNRF 572 VLA+ F Sbjct: 229 TGIVVLAIMEF 239 >gi|32470875|ref|NP_863868.1| nitrate transport permease protein [Rhodopirellula baltica SH 1] gi|32443020|emb|CAD71541.1| nitrate transport permease protein [Rhodopirellula baltica SH 1] Length = 371 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 19/191 (9%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH---------L 446 +A+I+ +PVG+ G P ++ + PF Q+ + PL + +Y+ Sbjct: 172 LATIVAVPVGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFF 231 Query: 447 NPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N +S + + W L N G ++ DF VA ++ W+ IILP P Sbjct: 232 NKAFLISASTVCLCSLWPTLVNTTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPL 291 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIM 562 G + G W I +++ + + GLG ++ + + GS + + V+++ Sbjct: 292 MFAGMRISLGVGWMVLIAADMLA------QNPGLGKFVWDEFQNGSELTYARIAFSVIVI 345 Query: 563 CCFVLALNRFL 573 L L+R + Sbjct: 346 GLIGLVLDRIM 356 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 12/137 (8%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG------AELAAIFAIFTSQVWNMTF 152 + P + I + + L +L + M Y G G A L + + +W Sbjct: 193 AMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFFNKAFLISASTVCLCSLWPTLV 252 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ +D V+ RLS WQ+ + +P S+P + M +S+ GW ++A++M Sbjct: 253 NTTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPLMFAGMRISLGVGWMVLIAADM 312 Query: 213 IVVGDTVIPLPGIGSYI 229 + PG+G ++ Sbjct: 313 LAQN------PGLGKFV 323 >gi|221369069|ref|YP_002520165.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] gi|221162121|gb|ACM03092.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] Length = 296 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%) Query: 69 TLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TL M+S V +++ LAA+S R+ ++ P+LD+MQ++P +L VV F Sbjct: 104 TLAMVSVCTVAAVIIGLPIGILAARSDRMQRLVNPVLDVMQTLPSFVYLIPVVVIF---G 160 Query: 128 PGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV G I+A+ ++ N+ + + ++ E + +F S QK W + +P Sbjct: 161 IGKVPGMIAVVIYAVPPMIRLTNLGIRLVDA------EVLEAAEAFGSSARQKLWNVQLP 214 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++P G+ +MMS+S VV + M+ VG G+G + AI Q Sbjct: 215 LALPALMTGINQTIMMSLS----MVVVASMVGVG-------GLGKNVLQAINNQ 257 >gi|74318291|ref|YP_316031.1| nitrate transport permease [Thiobacillus denitrificans ATCC 25259] gi|74057786|gb|AAZ98226.1| nitrate transport permease [Thiobacillus denitrificans ATCC 25259] Length = 299 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ I++ + L +L ++ AE A+I+ IF S +W M + Sbjct: 140 LNRMLAPIIGILRPVSPLAWLPIGLLVLQK--------AEPASIWVIFISSIWPMVLNTA 191 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P+D V+R +LS ++ F + P +P ++ + +S+ W +VA+EM+ Sbjct: 192 AGVQRVPQDYMNVARVLKLSEFRVFTRILFPAVLPHVLTGVRLSIGVAWLVIVAAEMLTG 251 Query: 216 G 216 G Sbjct: 252 G 252 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV V A+ + IP+G IG ++ + P +L + P + + Sbjct: 112 SLYRVGVGFGAAAAVGIPLGFMIGRFDFLNRMLAPIIGILRPVSPLAWLP--IGLLVLQK 169 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P S+ +IF + W ++ N AG P D+ VA ++ +R + I+ P + P Sbjct: 170 AEP---ASIWVIFISSIWPMVLNTAAGVQRVPQDYMNVARVLKLSEFRVFTRILFPAVLP 226 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + +TG + G AW + +E+ + G G+G ++ + + +++ + I+ Sbjct: 227 HVLTGVRLSIGVAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVAHIIIAIFIVGL 280 Query: 565 FVLALNRFL 573 LAL + L Sbjct: 281 VGLALEQGL 289 >gi|327542553|gb|EGF29027.1| nitrate ABC transporter permease protein [Rhodopirellula baltica WH47] Length = 371 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 19/191 (9%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH---------L 446 +A+I+ +PVG+ G P ++ + PF Q+ + PL + +Y+ Sbjct: 172 LATIVAVPVGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFF 231 Query: 447 NPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N +S + + W L N G ++ DF VA ++ W+ IILP P Sbjct: 232 NKAFLISASTVCLCSLWPTLVNTTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPL 291 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIM 562 G + G W I +++ + + GLG ++ + + GS + + V+++ Sbjct: 292 MFAGMRISLGVGWMVLIAADMLA------QNPGLGKFVWDEFQNGSELTYARIAFSVIVI 345 Query: 563 CCFVLALNRFL 573 L L+R + Sbjct: 346 GMIGLVLDRIM 356 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 17/181 (9%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG------AELAAIFAIFTSQVWNMTF 152 + P + I + + L +L + M Y G G A L + + +W Sbjct: 193 AMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFFNKAFLISASTVCLCSLWPTLV 252 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ +D V+ RLS WQ+ + +P S+P + M +S+ GW ++A++M Sbjct: 253 NTTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPLMFAGMRISLGVGWMVLIAADM 312 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLL-----AILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + PG+G ++ + L A ++ M+G++ + FR ++ + Sbjct: 313 LAQN------PGLGKFVWDEFQNGSELTYARIAFSVIVIGMIGLVLDRIMIFFRNLVSFG 366 Query: 268 N 268 N Sbjct: 367 N 367 >gi|212693216|ref|ZP_03301344.1| hypothetical protein BACDOR_02726 [Bacteroides dorei DSM 17855] gi|237709959|ref|ZP_04540440.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 9_1_42FAA] gi|237725376|ref|ZP_04555857.1| glycine betaine/L-proline transport system permease [Bacteroides sp. D4] gi|265753610|ref|ZP_06088965.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_1_33FAA] gi|212664321|gb|EEB24893.1| hypothetical protein BACDOR_02726 [Bacteroides dorei DSM 17855] gi|229436063|gb|EEO46140.1| glycine betaine/L-proline transport system permease [Bacteroides dorei 5_1_36/D4] gi|229456052|gb|EEO61773.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 9_1_42FAA] gi|263235324|gb|EEZ20848.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_1_33FAA] Length = 274 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ +I+L+ +A S+R +L PILD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTIIALIMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P+++ E SRSF + Q + + +P Sbjct: 144 GLGTVPGAFATIIFAM--PPVVRLT---SLGIKQVPKNVIEASRSFGATPMQLLFKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 ++P G+ ++MS+S VV + MI G Sbjct: 199 LALPTIMTGINQTILMSLS----MVVIAAMIAAGG 229 >gi|325122701|gb|ADY82224.1| binding-protein-dependent transport systems inner membrane component [Acinetobacter calcoaceticus PHEA-2] Length = 279 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L +I ++A S+ L P ++SIP L ++ +++ Sbjct: 86 STWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+ + A F +T+ V ++ N+ R L EV + +RL+ +Q+ + +P Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDRKLIEVGKVYRLNAFQRIISIILPA 197 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + PG++ + S+S W F++A+E+I Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225 >gi|239816496|ref|YP_002945406.1| nitrate ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239803073|gb|ACS20140.1| nitrate ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 309 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 31/240 (12%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDI--FWFCVVCGVA----IGIAWQ------SIG 365 R GV R P + Q+ +D+ FW V+ +A + + W+ + G Sbjct: 23 RGEGVPRAEAPSQPAPVAREQKPRTPIDLRAFWMRVLPPLAGFGLLVLIWELVAMKSTTG 82 Query: 366 YIVNHFTYQDVLYVI---------------WLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + T+Q L V W ++ RV + +A+ + IP G IG Sbjct: 83 FPSPLATWQQALTVFSDPFYSKGPNDQGVGWNVLSSLQRVALGFGLAAAVGIPAGFAIGR 142 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +S P LL + P + + + NP ++ + + W ++ N Sbjct: 143 FEFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKGANPAAIWTIFIC--SIWPMVINTAV 198 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G P+D+ VA +++ W+ + I+ P + PY +TG A G AW + +E+ + G Sbjct: 199 GVQRVPSDYMNVAKVLNLSEWKIFTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 258 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 152 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 203 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P D V++ LS W+ F + P +P ++ + +++ W +VA+EM+ G Sbjct: 204 PSDYMNVAKVLNLSEWKIFTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 258 >gi|254454126|ref|ZP_05067563.1| nitrate ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198268532|gb|EDY92802.1| nitrate ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 259 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 7/119 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E +AIF IF +W M + + + D V+R+ L + + + +P + P +V Sbjct: 129 SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGALKTAFTVILPAAAPTIV 188 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+GV+ Sbjct: 189 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGVV 240 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ +A+ I IP+G IG + PF Q+L + PL + + Sbjct: 71 SIYRVLTGYFLAAFIAIPLGFLIGMSSVAHKALNPFIQVLRPISPLAWMPLALFIIQDSE 130 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + + + +ILP P Sbjct: 131 AS-----AIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGALKTAFTVILPAAAP 185 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 VTG + G AW + +E+ G TG+G Y+ Sbjct: 186 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 218 >gi|317404717|gb|EFV85106.1| NrtB protein [Achromobacter xylosoxidans C54] Length = 242 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IPVG IG + + P LL P + L + + + Sbjct: 53 SLQRVGIGFGLAALVGIPVGFAIGRYAPVRAMFSPIVSLLR--PVSPLAWLPLGLLLFKA 110 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G S P D+ VA +++ W+ ++LP + PY Sbjct: 111 ANPAAIWAIFIC--SIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPY 168 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G TG+G ++ + +V+ + ++ Sbjct: 169 MLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIFVIGIV 222 Query: 566 VLALNRFL 573 L L L Sbjct: 223 GLILETLL 230 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 45/87 (51%) Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 A AAI+AIF +W M + + +P+D V+R LS W+ + +P +P + Sbjct: 110 AANPAAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPYM 169 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTV 219 + + +S+ W +VA+EM+ G + Sbjct: 170 LTGVRLSIGTAWLVIVAAEMLTGGTGI 196 >gi|149201150|ref|ZP_01878125.1| binding-protein-dependent transport systems inner membrane component [Roseovarius sp. TM1035] gi|149145483|gb|EDM33509.1| binding-protein-dependent transport systems inner membrane component [Roseovarius sp. TM1035] Length = 356 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 16/198 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449 +IA+ + +P+GI G P ++ + P Q+ + P+V VS ++ + Sbjct: 161 LIATAVAVPLGIAAGLSPTANAALNPLIQIFKPVSPLAWLPIVTMVVSAVYVTQDGLFSR 220 Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 L ++ + + W L N G ++ D V+ +T W ++LP P Sbjct: 221 SFLTSAITVTLCSLWPTLINTSLGVASIDRDLISVSRVLKLTTWTKITRLVLPSALPLIF 280 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 281 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS--STSLAKIMVAVFTI 332 Query: 568 ALNRFLWHPLYLYGTRCL 585 + FL L +Y + L Sbjct: 333 GIIGFLLDRL-MYAAQSL 349 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I RDL VSR +L+ W K L +P ++P + + +S+ GW Sbjct: 234 LWPTLINTSLGVASIDRDLISVSRVLKLTTWTKITRLVLPSALPLIFTGLRLSLGVGWMV 293 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + L I+ A+ T+ + FL D+L++ Sbjct: 294 LIAAEMLAQN------PGLGKFVWDEFQNGSSTSLAKIMVAVFTIGIIGFLLDRLMY 344 >gi|94500530|ref|ZP_01307061.1| ABC-type proline/glycine betaine transport system, permease component [Oceanobacter sp. RED65] gi|94427320|gb|EAT12299.1| ABC-type proline/glycine betaine transport system, permease component [Oceanobacter sp. RED65] Length = 313 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 18/164 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S + ++ PILD MQ+ P +L V+ F PGKV G + IFA V M Sbjct: 151 SRSDKAVSIVRPILDAMQTTPAFVYLIPIVMLF---SPGKVAGVIVTIIFA-----VPPM 202 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + +P DL E +R+F S Q + + +P ++P ++ + ++ G VV + Sbjct: 203 IRLTNLGIRQVPEDLIEAARAFGTSPKQLLFKVQLPLALPTIMAGVNQTLMLGLSMVVIA 262 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 MI V PG+G + I D I A + LG++ L Sbjct: 263 SMIAV-------PGLGLMVLQGIGRND---IGIATVGGLGIVIL 296 >gi|302327398|gb|ADL26599.1| ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 250 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 18/191 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ ++V A+++ I +GI G P + + ++P ++ A P NV+ P ++ + ++ Sbjct: 59 SLLKLVPAYFAAAVVGISLGIVSGSVPWVGTMLKPISRFAAPIPPNVYIPYAIAILPTFY 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW-WRYII---LPG 501 L+ + ++ W I N AGA+ P ++ A+ I + + WR LP Sbjct: 119 LSS----TFIIFIAAFWPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRIAFVASLPS 174 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 IF +G G ++ V+E + TGLG ++ + +P +V G+L Sbjct: 175 IF----SGLSVGMGLSFIMLTVAE------LFGENTGLGHFVQFYADYSDYPNMVAGILW 224 Query: 562 MCCFVLALNRF 572 VLA+ F Sbjct: 225 TGIVVLAIMEF 235 >gi|77465073|ref|YP_354576.1| ABC proline/glycine betaine transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126464525|ref|YP_001045638.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|332560670|ref|ZP_08414988.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides WS8N] gi|77389491|gb|ABA80675.1| ABC proline/glycine betaine transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126106336|gb|ABN78866.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|332274468|gb|EGJ19784.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides WS8N] Length = 303 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%) Query: 69 TLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TL M+S V +++ LAA+S R+ ++ P+LD+MQ++P +L VV F Sbjct: 111 TLAMVSVCTVAAVIIGLPIGILAARSDRMQRLVNPVLDVMQTLPSFVYLIPVVVIF---G 167 Query: 128 PGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV G I+A+ ++ N+ + + ++ E + +F S QK W + +P Sbjct: 168 IGKVPGMIAVVIYAVPPMIRLTNLGIRLVDA------EVLEAAEAFGSSARQKLWNVQLP 221 Query: 187 FSMPGLV----WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++P L+ +MMS+S VV + M+ VG G+G + AI Q Sbjct: 222 LALPALMTGVNQTIMMSLS----MVVVASMVGVG-------GLGKNVLQAINNQ 264 >gi|119898684|ref|YP_933897.1| putative sulfonate transport system permease [Azoarcus sp. BH72] gi|119671097|emb|CAL95010.1| putative sulfonate transport system, permease protein [Azoarcus sp. BH72] Length = 270 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 24/214 (11%) Query: 361 WQSIGYIVNH------FTYQDVLYVIW-----LGCITMFRVVVLII---IASIIWIPVGI 406 WQ+IG + VL +W LG T+ ++LI A ++ + +G+ Sbjct: 42 WQAIGSALAGSGNPLLPPPLTVLQALWDSLPELGRGTVSSFLILIPGFGTALVLGVALGL 101 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 G P ++ PFA++ A P V+ P ++ + +HL+ + ++ G W I Sbjct: 102 AAGTTPRLARAFFPFAKVAAPVPPTVYIPYAIAVLPTFHLS----ATFVVFVGAFWPIFQ 157 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N AGA A ++ A + R +I P P+ +G G ++ V+E+ Sbjct: 158 NAAAGALAVEGRHRDNARVLGFGRFETLRKVIFPAALPHIFSGMAVGLGFSFILLTVAEL 217 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 GLG ++ + +P +V G+L Sbjct: 218 FG------ANAGLGRFVQYYADFADYPRMVAGIL 245 >gi|322832872|ref|YP_004212899.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] gi|321168073|gb|ADW73772.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] Length = 293 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 21/203 (10%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ RV+ I+A I +P+GI +G I + +PF PA+ F PL++ Sbjct: 102 MTVMRVLGGFILACAIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILWAGIG 161 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+IF G+ + I V A D E A + T R +I+PG Sbjct: 162 EMQ-----KVLVIFIGSFFQITLMVAVTVGAARRDLVEAAYTLGATNQSVVRRVIIPGAA 216 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I S + +++ G++++ Sbjct: 217 PEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVNSQALLNTGQMIFGIIVIG 270 Query: 564 CFVL-------ALNR--FLWHPL 577 C L A NR F+W L Sbjct: 271 CIGLLSDLLFKAANRRLFVWSSL 293 >gi|171060512|ref|YP_001792861.1| nitrate ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170777957|gb|ACB36096.1| nitrate ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 331 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG ++ + P LL + P + + + Sbjct: 144 SLQRVAMGFGLAALVGIPLGFMIGRFNFLNQMLDPLISLLRPVSPLAWLP--IGLMVFQA 201 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G P D+ VA ++ W R I+ P + PY Sbjct: 202 ANPAAIWTIFIC--SIWPMVINTAVGVRQVPQDYLNVARVLELSEWTVMRKILFPAVLPY 259 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G AW + +E+ + G G+G ++ + + +++ + ++ Sbjct: 260 MLTGVRLAVGTAWLVIVAAEMLTGGQ------GIGFWLWDEWNNLNVAHILIAIFVIGGV 313 Query: 566 VLALNRFL 573 LAL L Sbjct: 314 GLALEALL 321 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 14/165 (8%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L P++ +++ + L +L ++ F P AAI+ IF +W M + Sbjct: 172 LNQMLDPLISLLRPVSPLAWLPIGLMVFQAANP--------AAIWTIFICSIWPMVINTA 223 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P+D V+R LS W + P +P ++ + +++ W +VA+EM+ Sbjct: 224 VGVRQVPQDYLNVARVLELSEWTVMRKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTG 283 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 G GIG ++ ++ IL A+ + GV + LL Sbjct: 284 GQ------GIGFWLWDEWNNLNVAHILIAIFVIGGVGLALEALLM 322 >gi|29347160|ref|NP_810663.1| glycine betaine/L-proline transport system permease [Bacteroides thetaiotaomicron VPI-5482] gi|253571897|ref|ZP_04849302.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 1_1_6] gi|298387517|ref|ZP_06997069.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 1_1_14] gi|29339059|gb|AAO76857.1| glycine betaine/L-proline transport system permease [Bacteroides thetaiotaomicron VPI-5482] gi|251838494|gb|EES66580.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 1_1_6] gi|298259724|gb|EFI02596.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 1_1_14] Length = 276 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ ++LL A S R ++ P+LD MQ++P +L V++ Sbjct: 83 EETMQTLALVLSSTCLALLLGVPLGIWTANSDRCNKIMRPVLDFMQTMPAFVYLIPAVLF 142 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F G V GA IFA+ V +T + +P+++ E SRSF + WQ + Sbjct: 143 F---GLGTVPGAFATIIFAM--PPVVRLT---GLGIRQVPKNVVEASRSFGATPWQLLYK 194 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 + +P ++P G+ +MMS+S VV + MI G Sbjct: 195 VQLPLALPTILTGINQTIMMSLS----MVVIAAMISAG 228 >gi|288962927|ref|YP_003453221.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] gi|288915193|dbj|BAI76677.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] Length = 277 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RVV+ I + + +P+G+ +G P I + P Q+L P + PL + ++ Sbjct: 84 SLYRVVLGFAIGAGLALPLGLAMGGNPRIHALFDPLMQVLRPIPPIAYIPL---AILWFG 140 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L N L+ G + +L N IAG + A + + +ILP PY Sbjct: 141 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYLRAARNLGAGKLTMFLRVILPAATPY 199 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + GA G A+ IVSE+ + +GLG I E+ E +++ G+ + Sbjct: 200 ILAGARIGIGTAFIVVIVSEMIA------VNSGLGFRILEAREFMWSDKIIAGMFTIGLL 253 Query: 566 VLALN 570 LA++ Sbjct: 254 GLAID 258 >gi|166364630|ref|YP_001656903.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843] gi|166087003|dbj|BAG01711.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843] Length = 271 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LR++ + LF L + ++ PI+ +++ +P F+ V+Y Sbjct: 82 LRVVGGFFLGGLFAIPLGILMGTFPSIRSLMEPIIGVVRYMPAPAFIPLLVIYLG----- 136 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 IG E + I IF ++ T + ++ IPR+L EV+ + + Q + + P+ + Sbjct: 137 --IG-ETSKIMLIFIGTIFFNTLMIMDAVKFIPRELIEVTYTLGGTRKQVLFKVITPYII 193 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ ++M+ W VV +E++ + G+G I LA K I +A L +L Sbjct: 194 PNVIDTFRVNMAAAWNLVVVAELVAADN------GLGKRILLAQKFLRTDEI-FACLIVL 246 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLER 274 G+I L FR + W+ K+ + R Sbjct: 247 GIIGFALDLSFRLFLQWTCKWSITR 271 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 20/184 (10%) Query: 362 QSIGYIVNH-FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 Q++G + F QD + + RVV + + IP+GI +G P I S ++P Sbjct: 62 QALGKLAEQGFLIQDTIT-------SFLRVVGGFFLGGLFAIPLGILMGTFPSIRSLMEP 114 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDF 479 ++ PA F PL+V +L +++IF GT ++ ++ P + Sbjct: 115 IIGVVRYMPAPAFIPLLV-----IYLGIGETSKIMLIFIGTIFFNTLMIMDAVKFIPREL 169 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 EV + T + +I P I P + AWN +V+E+ + + GL Sbjct: 170 IEVTYTLGGTRKQVLFKVITPYIIPNVIDTFRVNMAAAWNLVVVAELVAADN------GL 223 Query: 540 GAYI 543 G I Sbjct: 224 GKRI 227 >gi|257065395|ref|YP_003145067.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Slackia heliotrinireducens DSM 20476] gi|256793048|gb|ACV23718.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Slackia heliotrinireducens DSM 20476] Length = 253 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 14/172 (8%) Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 +II ++ + +GI +G I P ++ PA + P + H+ P+ + + Sbjct: 71 LIIGCLVALGLGIPMGLYGRFRKTIYPLIYAISVIPAILLSPFAL------HMMPSFFSA 124 Query: 454 --LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 L+++G+ W LF+ + G + + A + +TG++ ++ILP P ++G + Sbjct: 125 SIFLIVYGSIWATLFSTVNGIMTIDKRYFDNADTLKLTGFKRLIHVILPAAMPSIMSGMV 184 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 T+ GA+ +E+ +G + G+G ++ + + G F + G + M Sbjct: 185 TSLRGAFLMLCFAEM--YGSQY----GMGYFVKRNADMGLFDNMWAGFIFMT 230 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 18/76 (23%), Positives = 41/76 (53%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 A+IF I +W FS + I + + + + +L+G+++ ++ +P +MP ++ M Sbjct: 124 ASIFLIVYGSIWATLFSTVNGIMTIDKRYFDNADTLKLTGFKRLIHVILPAAMPSIMSGM 183 Query: 197 MMSMSGGWFFVVASEM 212 + S+ G + + +EM Sbjct: 184 VTSLRGAFLMLCFAEM 199 >gi|194290581|ref|YP_002006488.1| ABC transporter ATP-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193224416|emb|CAQ70427.1| putative ABC-type transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 288 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 12/184 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV ++A++I +P+GI++G + +PF PA+ F PL++ Sbjct: 96 MTVWRVVGGFVLAAVIAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIG 155 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+IF G+ + I+ V D E A + R +++PG Sbjct: 156 ETQ-----KLLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGIVRRVLIPGAA 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 211 PEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 264 Query: 564 CFVL 567 C L Sbjct: 265 CIGL 268 >gi|325122146|gb|ADY81669.1| nitrate ABC transporter, permease protein [Acinetobacter calcoaceticus PHEA-2] Length = 284 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 24/239 (10%) Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW----LGCI------ 385 N ++++ +FW + G+A I N T DV++ +W L Sbjct: 31 KNYAIAFISIVFWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWTFFQLSTAFEHVES 90 Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF---- 146 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 P+ S++ I G + IL N + G A F A S + +I+PG Sbjct: 147 --PSSEASMIFITFIGALFPILLNTVHGVGAVDPRFVASAKSLGASDLAIIHEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 46/250 (18%), Positives = 106/250 (42%), Gaps = 23/250 (9%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 L F + +GI+N P D++ + + + ++ + R++ V++ Sbjct: 49 GLAQFKINLGIVNF-----SNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVLAA 103 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L LA + ++L L+P L++++ IP + ++ ++ F + +E + IF Sbjct: 104 LIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIF 155 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 F ++ + + + + ++S S + +P ++P ++ + + M Sbjct: 156 ITFIGALFPILLNTVHGVGAVDPRFVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGM 215 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 WF +V +EMI GIG + + Q+ I+ M+ ++G + ++ L Sbjct: 216 GTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLV 268 Query: 261 RPMIVWSNKF 270 R V N+F Sbjct: 269 R---VIGNRF 275 >gi|296112268|ref|YP_003626206.1| nitrate ABC transporter permease protein NrtB [Moraxella catarrhalis RH4] gi|295919962|gb|ADG60313.1| nitrate ABC transporter permease protein NrtB [Moraxella catarrhalis RH4] gi|326560738|gb|EGE11106.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 46P47B1] gi|326561778|gb|EGE12113.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 7169] gi|326562282|gb|EGE12608.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 103P14B1] gi|326564740|gb|EGE14953.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 12P80B1] gi|326568997|gb|EGE19066.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis BC1] gi|326569297|gb|EGE19358.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis BC7] gi|326574534|gb|EGE24475.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis CO72] gi|326575485|gb|EGE25410.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 101P30B1] gi|326577899|gb|EGE27763.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis O35E] Length = 294 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 12/183 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV++ +A I+ IP+G IG P + S PF Q+L PL ++ Y + Sbjct: 109 RVLLGFFLAMIVAIPLGYAIGMSPVLGSAATPFVQILKPIS-----PLAWMPIALYTIKD 163 Query: 449 NLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + S+ +IF + W +L N G ++ +++ VA + ++ + I++P P V Sbjct: 164 SNASSIFVIFICSIWPMLTNTAFGVASVRREWRNVAKTLELSPLKTATKIVIPAAAPTIV 223 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G AW + +E+ G TG+G ++ S V+ VL++ + Sbjct: 224 TGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNQWNNLSLANVIFAVLLIGLMGM 277 Query: 568 ALN 570 L+ Sbjct: 278 ILD 280 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 15/168 (8%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S LG P + I++ I L ++ + + + ++IF IF +W M Sbjct: 131 SPVLGSAATPFVQILKPISPLAWMPIALYTIKD--------SNASSIFVIFICSIWPMLT 182 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ R+ V+++ LS + + +P + P +V M +SM W +VA+EM Sbjct: 183 NTAFGVASVRREWRNVAKTLELSPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEM 242 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +V G GIG ++ L +++A+L ++G++ + +LF Sbjct: 243 LVGGT------GIGYFVWNQWNNLSLANVIFAVL-LIGLMGMILDMLF 283 >gi|326571973|gb|EGE21978.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis BC8] Length = 294 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 12/183 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV++ +A I+ IP+G IG P + S PF Q+L PL ++ Y + Sbjct: 109 RVLLGFFLAMIVAIPLGYAIGMSPVLGSAATPFVQILKPIS-----PLAWMPIALYTIKD 163 Query: 449 NLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + S+ +IF + W +L N G ++ +++ VA + ++ + I++P P V Sbjct: 164 SNASSIFVIFICSIWPMLTNTAFGVASVRREWRNVAKTLELSPLKTATKIVIPAAAPTIV 223 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G AW + +E+ G TG+G ++ S V+ VL++ + Sbjct: 224 TGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNQWNNLSLANVIFAVLLIGLMGM 277 Query: 568 ALN 570 L+ Sbjct: 278 ILD 280 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 15/168 (8%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S LG P + I++ I L ++ + + + ++IF IF +W M Sbjct: 131 SPVLGSAATPFVQILKPISPLAWMPIALYTIKD--------SNASSIFVIFICSIWPMLT 182 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ R+ V+++ LS + + +P + P +V M +SM W +VA+EM Sbjct: 183 NTAFGVASVRREWRNVAKTLELSPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEM 242 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +V G GIG ++ L +++A+L ++G++ + +LF Sbjct: 243 LVGGT------GIGYFVWNQWNNLSLANVIFAVL-LIGLMGMILDMLF 283 >gi|260459647|ref|ZP_05807901.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gi|259034449|gb|EEW35706.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 257 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 32/235 (13%) Query: 360 AWQSIGYIVNHFTYQDVLYVI------------WLGC-ITMFRVVVLIIIASIIWIPVGI 406 AW ++G VN D L ++ WL IT++RV ++AS++ +P+GI Sbjct: 28 AWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDILITIWRVFGGFVLASVVAVPIGI 87 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYIL 465 +G + + ++PF PA+ F PL++ L LL+IF G+ + I+ Sbjct: 88 AMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELE-----KLLVIFVGSVFQII 142 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 + + D E A + T + +I+P P G AW IV+E Sbjct: 143 LIIAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPANAPEIAETLRLVLGWAWTYVIVAE 202 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL-------ALNRFL 573 + ++G+G I S + + +++ G++++ L A NR+L Sbjct: 203 LIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSDFAFKAFNRWL 251 >gi|240137626|ref|YP_002962097.1| nitrate transport system permease protein [Methylobacterium extorquens AM1] gi|240007594|gb|ACS38820.1| nitrate transport system permease protein [Methylobacterium extorquens AM1] Length = 284 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A ++ IPVG IG P +S + P+ Q+L + PL + + Sbjct: 96 SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 155 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N + G + ++ VA + ++ R +ILP P Sbjct: 156 LS-----AIFVIFICSIWPMLINTVFGVAGTRKEWHNVARTLEVSPVRRAFTVILPAAAP 210 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V+ +L++ Sbjct: 211 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGL 264 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 265 VGMVLDQLL 273 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+AIF IF +W M + + ++ V+R+ +S ++ + + +P + P ++ Sbjct: 154 SSLSAIFVIFICSIWPMLINTVFGVAGTRKEWHNVARTLEVSPVRRAFTVILPAAAPTIL 213 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ + ++ ++L + V Sbjct: 214 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGM 267 Query: 254 LYDQLLFR 261 + DQLL R Sbjct: 268 VLDQLLAR 275 >gi|227328482|ref|ZP_03832506.1| putative sulfate ester transporter, permease component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 568 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ S ++ +L + L SRR +L P + + IP LG++ +V F G Sbjct: 120 RLASGLLAGVLAGTLLGALMGTSRRAEHLLHPTVYALAQIPTLGWIPLFMVLF-----GI 174 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G +LA I + + MT + N P L+EV+R+ RL Q+ L +P ++P Sbjct: 175 DDGLKLAVII---KAVIIPMTLHTQTGVRNAPHALQEVARTLRLPWHQRLIKLTLPAALP 231 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + + +++S W ++ E++ Sbjct: 232 TWLTGLRLALSQAWVSLIVVELL 254 >gi|330953436|gb|EGH53696.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae Cit 7] Length = 281 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 25/235 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS VI V+A SR L P Sbjct: 69 RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 120 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 121 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 172 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + LS ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 173 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 226 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 G ++ + +L A++ + + L D LL + + W + F + G Sbjct: 227 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLANLEKRFLAWRDTFNGQSREG 281 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 83 SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 135 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + ++ +R R I+ Sbjct: 136 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRIL 191 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + +W + +E+ + T GLG +++ E S P++VL Sbjct: 192 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 244 Query: 559 VLIMCC 564 +I+ Sbjct: 245 AIIVLA 250 >gi|294495023|ref|YP_003541516.1| binding-protein-dependent transporters inner membrane component [Methanohalophilus mahii DSM 5219] gi|292666022|gb|ADE35871.1| binding-protein-dependent transport systems inner membrane component [Methanohalophilus mahii DSM 5219] Length = 276 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 25/181 (13%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 +Y+ T ++S+ ++L+ LAAKS L +L PILD+MQ++P +L V++ Sbjct: 89 EYSMETIALVISSAALALIIGIPLGILAAKSETLYRILRPILDLMQTMPSFVYLIPAVIF 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + PG + A + + T + Q +P +L EV+ +F + WQK Sbjct: 149 FGLGNVPGMI-----ATVVFSMPPAIRLTTLGITQ----VPTELVEVADAFGSTSWQKLI 199 Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P + M G+ +M+++S M+V+ ++I G+G + + I+ D Sbjct: 200 KVEIPVALKTIMAGVNQCIMLALS----------MVVIA-SMIGARGLGYQVLIGIQRVD 248 Query: 238 L 238 + Sbjct: 249 I 249 >gi|199597436|ref|ZP_03210866.1| Putative glycine/betaine/carnitine ABC transporter, membrane-spanning subunit [Lactobacillus rhamnosus HN001] gi|258509142|ref|YP_003171893.1| ABC transporter binding-protein-dependent transporter permeasecomponent [Lactobacillus rhamnosus GG] gi|199591696|gb|EDY99772.1| Putative glycine/betaine/carnitine ABC transporter, membrane-spanning subunit [Lactobacillus rhamnosus HN001] gi|257149069|emb|CAR88042.1| ABC transporter, binding-protein-dependent transporter permeasecomponent [Lactobacillus rhamnosus GG] gi|259650429|dbj|BAI42591.1| glycine/betaine/carnitine ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 283 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L+A +++++ AA+S+ + ++ P++D MQ++P +L V +F + Sbjct: 98 TQTLTLVLTASLLAIVIGIPLGIWAAESKTVSAIVKPLMDFMQTMPAFVYLIPAVAFFGI 157 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T M Q + +P DL E + +F + WQ+ + Sbjct: 158 GMVPGVVA----SVIFAM------PPTVRMTQLGIEQVPADLNEAAVAFGATSWQQLIKV 207 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +PF+ M G+ +MM+++S +VV ++I G+G+ + A+ D Sbjct: 208 QLPFARGTIMAGINQSMMLALS-----------MVVIASMIGAMGLGTKVYFAVGRND 254 >gi|288935851|ref|YP_003439910.1| binding-protein-dependent transporters inner membrane component [Klebsiella variicola At-22] gi|288890560|gb|ADC58878.1| binding-protein-dependent transport systems inner membrane component [Klebsiella variicola At-22] Length = 522 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ + IP LG++ +V F G G +LA I + V MT + Q++ ++ Sbjct: 106 PLFYALAQIPTLGWIPLLMVLF-----GIDNGLKLAVIV---KTTVVPMTINTQQAVASV 157 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 P+ L E SR S WQ+ +L +P S+PG + +++S W ++ E++ + + Sbjct: 158 PQTLSEASRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSEGI 215 Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 13/152 (8%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 R G + P L++++ I + +L + N GK++ LA+ F +F FS Sbjct: 355 RAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFFPMF--------FST 406 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 Q++ L+EV+R RL + + + +P + PG+ + +++ W + +E + Sbjct: 407 LQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFM 466 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 GIGS + A + D+ IL M+ Sbjct: 467 SSGV-----GIGSLMINAQQLLDMPTILCGMV 493 >gi|163761182|ref|ZP_02168258.1| nitrate ABC transporter, inner membrane subunit [Hoeflea phototrophica DFL-43] gi|162281521|gb|EDQ31816.1| nitrate ABC transporter, inner membrane subunit [Hoeflea phototrophica DFL-43] Length = 277 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 15/190 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+LS ++ L L S L P + +++ I L ++ + + Sbjct: 92 RVLSGYALAALVAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFIIQD----- 146 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +E +AIF IF +W M + + + +D V+++ L + + + +P + P Sbjct: 147 ---SERSAIFVIFICSIWPMLINTAFGVAGVRKDWVNVAKTHELGALRTAFMVILPAAAP 203 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 +V M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+G Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIG 256 Query: 251 VIFLYDQLLF 260 V+ + +F Sbjct: 257 VVGMALDAMF 266 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ +A+++ IP+G IG + PF Q+L + PL + + Sbjct: 89 SIYRVLSGYALAALVAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFIIQDSE 148 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + + R +ILP P Sbjct: 149 RS-----AIFVIFICSIWPMLINTAFGVAGVRKDWVNVAKTHELGALRTAFMVILPAAAP 203 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 VTG + G AW + +E+ G TG+G Y+ V+ +L++ Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLDLTSVIFSILMIGV 257 Query: 565 FVLALN 570 +AL+ Sbjct: 258 VGMALD 263 >gi|300716105|ref|YP_003740908.1| Aliphatic sulfonates transport permease [Erwinia billingiae Eb661] gi|299061941|emb|CAX59057.1| Aliphatic sulfonates transport permease protein [Erwinia billingiae Eb661] Length = 263 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 24/190 (12%) Query: 95 RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ + +++++P L + +++F K+ L +F I+ + Sbjct: 91 RLGERLLDTSVQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTMFPIY--------LN 142 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y + NI R L E++RS+ LSGW F + +P ++P ++ + ++ W + Sbjct: 143 TYHGIRNIDRGLVEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFALGLMWL------TL 196 Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267 +V +T+ GIG Y+A+ +E D++ ILYA+L L + QLL R + W Sbjct: 197 IVAETISASSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERVWLRWH 253 Query: 268 NKFRLERTTG 277 ++L+ Sbjct: 254 PAYQLKEDNA 263 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++GW + ++LPG P + G A Sbjct: 130 LVALGTMFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571 G W IV+E S ++G+G Y+A + + +VV+ +I+ + L Sbjct: 190 GLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVSA 242 Query: 572 -------FLWHPLY 578 WHP Y Sbjct: 243 QLLERVWLRWHPAY 256 >gi|33867016|ref|NP_898575.1| putative cyanate ABC transporter [Synechococcus sp. WH 8102] gi|33639617|emb|CAE09001.1| putative cyanate ABC transporter [Synechococcus sp. WH 8102] Length = 259 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV++ +A ++ IPVG+++G + S + P+ QLL + P + + Sbjct: 71 ISLRRVLIGYTLAMVVAIPVGLFVGVSKTVKSSVDPYVQLLKPVSPLAWLP-----IGLF 125 Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + +IF T W L N G + +D +VA S + +ILP + Sbjct: 126 VFRNSEVTGIFVIFITSIWPTLINTAIGVQSVDSDVLKVAKSLGASKTNTITKVILPAVM 185 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 P + G + G AW + +E+ L TG+G +I Sbjct: 186 PNILAGMRISMGTAWLVIVAAEM-------LLGTGIGYFI 218 Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust. Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 8/144 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L ++++ S+ + + P + +++ + L +L + F N Sbjct: 75 RVLIGYTLAMVVAIPVGLFVGVSKTVKSSVDPYVQLLKPVSPLAWLPIGLFVFRN----- 129 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +E+ IF IF + +W + + ++ D+ +V++S S + +P MP Sbjct: 130 ---SEVTGIFVIFITSIWPTLINTAIGVQSVDSDVLKVAKSLGASKTNTITKVILPAVMP 186 Query: 191 GLVWNMMMSMSGGWFFVVASEMIV 214 ++ M +SM W +VA+EM++ Sbjct: 187 NILAGMRISMGTAWLVIVAAEMLL 210 >gi|312141398|ref|YP_004008734.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311890737|emb|CBH50056.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 271 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 10/182 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +M+R++V + IA++I IP+G+ IG P + ++P Q L + P+ V+ Sbjct: 68 AASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPIAVALFGI 127 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 H P + L+ W I+ N AG A VA S T ++LP I Sbjct: 128 GH-RPVFF---LIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTERLTAVVLPAIR 183 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + TG A G AW + +E+ +GLG I + ++ ++ +V+ +L++ Sbjct: 184 GHLQTGLRVALGIAWVVLVPAEMLG------VQSGLGYQILNARDQLAYDQVMAVILVIG 237 Query: 564 CF 565 Sbjct: 238 LL 239 >gi|229553043|ref|ZP_04441768.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258540345|ref|YP_003174844.1| ABC transporter binding-protein-dependent transporter permease [Lactobacillus rhamnosus Lc 705] gi|229313540|gb|EEN79513.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257152021|emb|CAR90993.1| ABC transporter, binding-protein-dependent transporter permeasecomponent [Lactobacillus rhamnosus Lc 705] Length = 283 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L+A +++++ AA+S+ + ++ P++D MQ++P +L V +F + Sbjct: 98 TQTLTLVLTASLLAIVIGIPLGIWAAESKTVSAIVKPLMDFMQTMPAFVYLIPAVAFFGI 157 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T M Q + +P DL E + +F + WQ+ + Sbjct: 158 GMVPGVVA----SVIFAM------PPTVRMTQLGIEQVPADLNEAAVAFGATSWQQLIKV 207 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +PF+ M G+ +MM+++S +VV ++I G+G+ + A+ D Sbjct: 208 QLPFARGTIMAGINQSMMLALS-----------MVVIASMIGAMGLGTKVYFAVGRND 254 >gi|114320857|ref|YP_742540.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114227251|gb|ABI57050.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 311 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ I++ + L +L ++ F + P +AIF IF + +W + + + I Sbjct: 156 PLIQILRPVSPLAWLPIGLLLFRAVDP--------SAIFVIFITSIWPIILNTSAGVQAI 207 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 PRD VSR +L+ + + +P ++P ++ M +S+ W +VA+EM+ G Sbjct: 208 PRDYMNVSRVLQLNRLEITRKILLPAALPHMLTGMRLSLGIAWMVIVAAEMLTGG 262 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 12/191 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV+ +A ++ IPVG+ +G P Q+L + P + Sbjct: 117 WQVTYSLGRVLGGFFLALLVGIPVGLMMGTSEVCRRAWGPLIQILRPVSPLAWLP--IGL 174 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + ++P+ ++ +IF T W I+ N AG A P D+ V+ + R I+L Sbjct: 175 LLFRAVDPS---AIFVIFITSIWPIILNTSAGVQAIPRDYMNVSRVLQLNRLEITRKILL 231 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P+ +TG + G AW + +E+ + G G+G ++ + + +++ + Sbjct: 232 PAALPHMLTGMRLSLGIAWMVIVAAEMLTGG------IGIGFFVWDEWNNLNVASILVAI 285 Query: 560 LIMCCFVLALN 570 L++ +AL+ Sbjct: 286 LVIGLVGIALD 296 >gi|332968035|gb|EGK07122.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 279 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 18/159 (11%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + ++ T +L+A +IS++ AA+S+ + +L P+LD MQ++P +L V+ Sbjct: 87 EKSTETLSLVLTASLISVILGIPLGIWAARSQTVRKILTPVLDFMQTMPAFVYL-IPAVF 145 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F L G V G + IFA+ T ++ N+ + +P DL E + +F + WQK Sbjct: 146 FFAL--GAVPGVIASVIFAMPPTIRLTNL------GIRQVPGDLIEAADAFGSTSWQKLV 197 Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + +P + M G+ +M+S+S VV S MI G Sbjct: 198 KVQLPLARTTIMAGVNQTIMLSLS----MVVISSMIGAG 232 >gi|89055532|ref|YP_510983.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] gi|88865081|gb|ABD55958.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] Length = 356 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 19/197 (9%) Query: 77 VISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTFT--VVYFMNL 126 + ++ F F+ AT+ A S L PI+ I + + L +L VV + Sbjct: 154 ITTVFFGFLLATVVAVPLGIAAGLSATANAALNPIIQIFKPVSPLAWLPIVSIVVSALAA 213 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G + + + + +W + + +I +DL VS+ ++ W K L +P Sbjct: 214 DDGLFEKSFMVSAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMGTWTKIQKLVLP 273 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILY 243 ++P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ Sbjct: 274 SALPLIFTGLRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMV 327 Query: 244 AMLTMLGVIFLYDQLLF 260 A+LT+ + FL D+L+F Sbjct: 328 AVLTIGLIGFLLDRLMF 344 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/216 (20%), Positives = 87/216 (40%), Gaps = 19/216 (8%) Query: 368 VNHFTYQDVLYV-IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + FT Y IW T+F ++A+++ +P+GI G ++ + P Q+ Sbjct: 137 IRDFTGAPTYYQQIWTSITTVF---FGFLLATVVAVPLGIAAGLSATANAALNPIIQIFK 193 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG------TQWYILFNVIAGASAFPNDFK 480 + P+V VS + L+ M+ + W L N G ++ D Sbjct: 194 PVSPLAWLPIVSIVVSALAADDGLFEKSFMVSAITVTLCSLWPTLINTALGVASIDKDLV 253 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + W + ++LP P TG + G W I +E+ + + GLG Sbjct: 254 NVSKVLKMGTWTKIQKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 307 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S ++++ VL + L+R + Sbjct: 308 KFVWDEFQNGSSQSLAKIMVAVLTIGLIGFLLDRLM 343 >gi|325924365|ref|ZP_08185905.1| periplasmic glycine betaine/choline-binding lipoprotein [Xanthomonas gardneri ATCC 19865] gi|325545152|gb|EGD16466.1| periplasmic glycine betaine/choline-binding lipoprotein [Xanthomonas gardneri ATCC 19865] Length = 490 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 13/171 (7%) Query: 33 NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA----T 88 + L E V + + P + + SL + R T L+ + ISL F V A Sbjct: 258 QVKLERQSEAAVAAQWLGVTPAS-EADSLIKRLLRHTREHLALVGISLGFALVIALPLGV 316 Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 LAA+ RLG V++ + ++Q++P L F + F IGA+ AI A+F + Sbjct: 317 LAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLL 368 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + + + L +IPR+L + +++ L W + W + +P + +V + + Sbjct: 369 PIVRNTHAGLTSIPRELRQTAQAIWLPAWTRLWRVELPLARRTIVAGIQTA 419 >gi|260432057|ref|ZP_05786028.1| binding-protein-dependent transport systems inner membrane component [Silicibacter lacuscaerulensis ITI-1157] gi|260415885|gb|EEX09144.1| binding-protein-dependent transport systems inner membrane component [Silicibacter lacuscaerulensis ITI-1157] Length = 360 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453 +IA++I +P+GI G P ++ + P Q+ + P+V VS Y N L+ Sbjct: 165 LIATVIAVPLGIAAGLSPTANAALNPLIQVFKPVSPLAWLPIVTMIVSAVYVTNDGLFAK 224 Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 +I + W L N G ++ D V+ + W ++LP P Sbjct: 225 SFLISAITVTLCSLWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIF 284 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G W I +E+ + + GLG ++ + + GS Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 322 Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust. Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL VS+ +++ W K L +P ++P + + +S+ GW Sbjct: 238 LWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMV 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + L I+ A+ T+ + FL D++++ Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSSSLARIMVAVFTIGIIGFLLDRVMY 348 >gi|120611631|ref|YP_971309.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] gi|120590095|gb|ABM33535.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] Length = 289 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 19/197 (9%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ ++A+++ +P+GI +G + + ++PF PA+ F PL++ Sbjct: 98 MTVWRVLGGFVLAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGLG 157 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L LL+IF G+ + I+ V D E A + T R +++PG Sbjct: 158 ELQ-----KLLVIFIGSVFQIILMVAVIVGNARKDLVEAAYTLGATPTGIVRRVLIPGAA 212 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 213 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 266 Query: 564 CFVL-------ALNRFL 573 L ALNR L Sbjct: 267 LIGLVSDFLFKALNRRL 283 >gi|253998066|ref|YP_003050129.1| nitrate ABC transporter inner membrane subunit [Methylovorus sp. SIP3-4] gi|253984745|gb|ACT49602.1| nitrate ABC transporter, inner membrane subunit [Methylovorus sp. SIP3-4] Length = 305 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ I++ + L +L ++ F P AAI+ IF S +W M + + + Sbjct: 152 PIIGILRPVSPLAWLPIGLLVFKAANP--------AAIWVIFISAIWPMIINTAVGVSKV 203 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V++ LS W+ + PF +P ++ + +S+ W +VA+EM+ G Sbjct: 204 PQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 258 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A++I IP+G IG +S P +L + P + + + Sbjct: 118 SLERVGLGFGLAALIGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLP--IGLLVFKA 175 Query: 446 LNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP +W+ + W ++ N G S P D+ VA +++ W+ I+ P + P Sbjct: 176 ANPAAIWV---IFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFVLP 232 Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530 Y +TG + G AW + +E+ + G Sbjct: 233 YMMTGVRLSIGVAWLVIVAAEMLTGG 258 >gi|86749177|ref|YP_485673.1| nitrate transport permease [Rhodopseudomonas palustris HaA2] gi|86572205|gb|ABD06762.1| nitrate transport permease [Rhodopseudomonas palustris HaA2] Length = 279 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +IA + IP+G IG P ++ + PF Q+L + PL + + Sbjct: 91 SIARVAIGYLIAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSS 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N G ++ ++ VA + + R +ILP P Sbjct: 151 LS-----AIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V++ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIVNVIIAILLIGV 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMLLDQIL 268 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+AIF IF VW M + + ++ ++ V+R+ + ++ + + +P + P ++ Sbjct: 149 SSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAPTIL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ ++ ++ A+L + V Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIVNVIIAILLIGVVGM 262 Query: 254 LYDQLLFR 261 L DQ+L R Sbjct: 263 LLDQILAR 270 >gi|259910017|ref|YP_002650373.1| taurine transporter subunit [Erwinia pyrifoliae Ep1/96] gi|224965639|emb|CAX57171.1| Taurine ABC transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283480113|emb|CAY76029.1| Taurine transport permease protein tauC [Erwinia pyrifoliae DSM 12163] Length = 275 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 13/197 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I +PVGI +G + + P +L P + PL+V Sbjct: 81 AASLTRIVIALLAAVVIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG A S + W+ +++LPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKNAQQVRLRAARSLGASRWQVLWFVVLPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 197 PEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIA 250 Query: 564 CFVLALN---RFLWHPL 577 AL R L H L Sbjct: 251 LIAFALELALRALQHRL 267 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 33/151 (21%), Positives = 74/151 (49%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R++ A++ +++ L + L +L P++++ + +P L +L V++ Sbjct: 78 QHLAASLTRIVIALLAAVVIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + N + +RS S WQ W+ Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKNAQQVRLRAARSLGASRWQVLWF 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 190 VVLPGALPEILTGVRIGLGVGWSTLVAAELI 220 >gi|158422309|ref|YP_001523601.1| nitrate transporter component [Azorhizobium caulinodans ORS 571] gi|158329198|dbj|BAF86683.1| nitrate transporter component [Azorhizobium caulinodans ORS 571] Length = 302 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 6/123 (4%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 +AIF IF + +W + + + NIP+D V++ RL+ + FW + +P + P + + Sbjct: 172 SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPSAAPYIFTGL 231 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + + W +VA+EM+ G GIG +I A L I+ A++ + V F+ D Sbjct: 232 RIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLD 285 Query: 257 QLL 259 +L+ Sbjct: 286 RLV 288 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 10/132 (7%) Query: 443 YYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 + NP+ ++ +IF T W I+ N G P D++ VA + ++ I+LP Sbjct: 166 FRDSNPS---AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPS 222 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 PY TG G +W A + +E+ + G G+G +I ++ P++++ ++ Sbjct: 223 AAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLPDIIVALVY 276 Query: 562 MCCFVLALNRFL 573 + L+R + Sbjct: 277 IGVVGFVLDRLV 288 >gi|182416893|ref|ZP_02948277.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium butyricum 5521] gi|237667160|ref|ZP_04527144.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379191|gb|EDT76692.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium butyricum 5521] gi|237655508|gb|EEP53064.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 256 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 12/175 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+ +IA I+ + +GI IG + + Q+L P + PL + ++ + Sbjct: 71 RVLEGFVIALILALILGIGIGLSKKLEIFTEITFQILKPIPPIAWIPL---AIIWFGIGE 127 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + + +++ G + IL NVI G + E+ + + ++ + +ILPG PY +T Sbjct: 128 SSKI-FIIVLGAFFPILLNVIDGIKNIDPKYLELEKVYEVKKIKFIKGVILPGALPYIMT 186 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE-VVLGVLIM 562 G G AW + +E+ + T G+G Y+ S P+ V+LG+LI+ Sbjct: 187 GIRVGLGNAWVCVVAAEMIA------ATKGVG-YMLTDGRNLSRPDLVILGMLII 234 >gi|146278861|ref|YP_001169020.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145557102|gb|ABP71715.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 303 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QVW 148 AA+S R+ V+ P+LD+MQ++P +L VV F GKV G I+A+ ++ Sbjct: 133 AARSDRMQRVINPVLDVMQTLPSFVYLIPVVVIF---GIGKVPGMIAVVIYAVPPMIRLT 189 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 N+ + + + E + +F SG QK W + +P ++P L+ + ++ VV Sbjct: 190 NLGIRLVDA------QVLEAAEAFGSSGRQKLWNVQLPLALPALMTGVNQTIMMALSMVV 243 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + M+ VG G+G + AI Q Sbjct: 244 VASMVGVG-------GLGKNVLQAINNQ 264 >gi|325673186|ref|ZP_08152879.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325556021|gb|EGD25690.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 271 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 10/179 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +M+R++V + IA++I IP+G+ IG P + ++P Q L + P+ V+ Sbjct: 68 AASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPIAVALFGI 127 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 H P + L+ W I+ N AG A VA S T ++LP I Sbjct: 128 GH-RPVFF---LIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTERLTAVVLPAIR 183 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + TG A G AW + +E+ +GLG I + ++ ++ +V+ +L++ Sbjct: 184 GHLQTGLRVALGIAWVVLVPAEMLG------VQSGLGYQILNARDQLAYDQVMAVILVI 236 >gi|91788795|ref|YP_549747.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] gi|91698020|gb|ABE44849.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] Length = 252 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/181 (20%), Positives = 83/181 (45%), Gaps = 10/181 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV + A+++ +P+G+W+G + P Q+L + PL + + Sbjct: 59 SLFRVGTGFLSATLVALPMGLWMGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGN 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++P L+ + + ++ AG + A +F ++ + +R +I+P + P Sbjct: 119 VSP----IFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPE 174 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G G AW + +E+ I LR +GLG I +S G+ ++V+ +++ Sbjct: 175 IIVGMRIGLGVAWLVVVAAEM-----IALR-SGLGYLIMDSRNAGNRYDLVIASMVIIGV 228 Query: 566 V 566 + Sbjct: 229 I 229 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 19/178 (10%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFM--NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 L PI I++ I + ++ +++F N+ P IF IF + V+ M Sbjct: 91 LNPIFQILRPISPIAWIPLAILWFGVGNVSP----------IFLIFIASVFPMIVQTAAG 140 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + I R + +F +S + F + +P +P ++ M + + W VVA+EMI + Sbjct: 141 VHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPEIIVGMRIGLGVAWLVVVAAEMIALRS 200 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFRPMIVWSNKFRLER 274 G+G I + + ++ A + ++GVI L D + R + S ++R R Sbjct: 201 ------GLGYLIMDSRNAGNRYDLVIASMVIIGVIGLLLDGTMRRLEGLKSIRWRYGR 252 >gi|71906470|ref|YP_284057.1| nitrate transport permease [Dechloromonas aromatica RCB] gi|71846091|gb|AAZ45587.1| Nitrate transport permease [Dechloromonas aromatica RCB] Length = 312 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 8/126 (6%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 +S L ++ PI+ +++ + L +L ++ F P AA + IF +W M Sbjct: 146 GRSAFLSAMINPIISLLRPVSPLAWLPIGLLVFKKADP--------AATYTIFICSIWPM 197 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Q + +P+D V+R LS W+ + P +P ++ + +S+ W +VA+ Sbjct: 198 IMNTAQGVQRVPQDYLNVARVLALSEWKVVTKILFPAVLPYMLTGIRLSIGTAWLVIVAA 257 Query: 211 EMIVVG 216 EM+ G Sbjct: 258 EMLTGG 263 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + A+++ IP+G +G +S+ I P LL + P + + + Sbjct: 123 SLQRVGIGFGFAALVGIPLGFILGRSAFLSAMINPIISLLRPVSPLAWLP--IGLLVFKK 180 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +P ++ + + W ++ N G P D+ VA ++ W+ I+ P + PY Sbjct: 181 ADPAATYTIFIC--SIWPMIMNTAQGVQRVPQDYLNVARVLALSEWKVVTKILFPAVLPY 238 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 239 MLTGIRLSIGTAWLVIVAAEMLTGG 263 >gi|227115048|ref|ZP_03828704.1| putative sulfate ester transporter, permease component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 569 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ S ++ +L + L SRR +L P + + IP LG++ +V F G Sbjct: 121 RLASGLLAGVLAGTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFMVLF-----GI 175 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G +LA I + + +T + N+P L+EV+R+ RL Q+ L +P ++P Sbjct: 176 DDGLKLAVII---KAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLIKLTLPAALP 232 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + + +++S W ++ E++ Sbjct: 233 TWLTGLRLALSQAWVSLIVVELL 255 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 13/202 (6%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D+ ++ + SL + + R L+ V ++ V L + + P + Sbjct: 351 PADVWHMLLQGIRDGSLTEAMQASLTRALAGAVCGIIAGLVCGVLLGLNATSDALFTPTV 410 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++ I + +L + N GK+ LA+ F M + ++ + + Sbjct: 411 ATLRQIALFAWLPLLTAWVGNDEVGKITFVALASFFP--------MLVASHRGIRQRSQA 462 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L+EV++ +L W + L +P + P + + +S+ W + +E + T G Sbjct: 463 LQEVAQVLQLRLWTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT-----G 517 Query: 225 IGSYIALAIKEQDLLAILYAML 246 IGS + A + D+ I+ ML Sbjct: 518 IGSLMINAQQLLDMPLIISGML 539 >gi|158423976|ref|YP_001525268.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158330865|dbj|BAF88350.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 269 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 18/193 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q A TT+ +S +S L A + A SR + L P+L QSIP + VV+ Sbjct: 65 QEAIPTTIATVSGFALSALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPLFVVW 124 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + P KVI A L +F + + V Q ++ D+ +++R+ + S Q F Sbjct: 125 FGFGMVP-KVISAFLLGVFPVIVAGV--------QGFKSVEGDMRDLARAMKASKLQTFA 175 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP + + +S++ +A VVG+ V G+G + +I +L + Sbjct: 176 MVSLPHAMPAIFAGLKVSVT------LAVVGAVVGEFVGANSGLGFVLQRSIGNFELPTM 229 Query: 242 LYA--MLTMLGVI 252 A +L ++GV+ Sbjct: 230 FAALILLALIGVV 242 >gi|168184309|ref|ZP_02618973.1| putative ABC transporter, permease protein [Clostridium botulinum Bf] gi|237794723|ref|YP_002862275.1| putative ABC transporter permease [Clostridium botulinum Ba4 str. 657] gi|182672593|gb|EDT84554.1| putative ABC transporter, permease protein [Clostridium botulinum Bf] gi|229260901|gb|ACQ51934.1| putative ABC transporter, permease protein [Clostridium botulinum Ba4 str. 657] Length = 253 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 5/164 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV+ I+I+ ++ I +GI G + ++P + A P V ++++ V Sbjct: 68 SIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATP--VMSIIIIALVWLKS 125 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N +++ S+LM F I NV+ G + E+A+ + + I LP PY Sbjct: 126 SNVSIFTSILMCFPI---IYTNVLLGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPY 182 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 ++G + G W S+ SEV S + L A +TE+ Sbjct: 183 IISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEE 226 >gi|225405727|ref|ZP_03760916.1| hypothetical protein CLOSTASPAR_04948 [Clostridium asparagiforme DSM 15981] gi|225042751|gb|EEG52997.1| hypothetical protein CLOSTASPAR_04948 [Clostridium asparagiforme DSM 15981] Length = 264 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 42/185 (22%) Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVV---------SCVSYYHLNPNLWLSLLMIFGTQW 462 P + ++PF L+ + P F L + C+SY + P +++ Sbjct: 93 PFLGELLEPFMSLIRSIPVASFVILALIWIGSGSLSVCISYLVVLPIVYV---------- 142 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 N IAG ++ E+A FH+ + R+I +P + PY V+G TA G +W + I Sbjct: 143 ----NTIAGLASTDLRLLEMARVFHMPALKKVRFIYVPALMPYLVSGCKTALGMSWKSGI 198 Query: 523 VSEVAS-----------WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +EV + ++L T GL A+ +F VV+ + F+ L R Sbjct: 199 AAEVIGIPDTSIGEQLYYSKLYLDTAGLFAW--------TFVIVVVSAVFEQLFLFLLKR 250 Query: 572 FLWHP 576 F P Sbjct: 251 FWRQP 255 >gi|82775852|ref|YP_402199.1| taurine transporter subunit [Shigella dysenteriae Sd197] gi|81240000|gb|ABB60710.1| taurine transport system permease protein [Shigella dysenteriae Sd197] Length = 275 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVLIGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG GG W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGGGWSTLVAAELIA------ATRGLGFMVQSAGE 235 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/151 (20%), Positives = 73/151 (48%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R++ A++ ++L S + +L P++++ + +P L +L V++ Sbjct: 78 QHLAASLTRIVLALLAAVLIGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + + + ++S S Q W+ Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWF 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GGW +VA+E+I Sbjct: 190 VILPGALPEILTGLRIGLGGGWSTLVAAELI 220 >gi|313200132|ref|YP_004038790.1| nitrate ABC transporter inner membrane subunit [Methylovorus sp. MP688] gi|312439448|gb|ADQ83554.1| nitrate ABC transporter, inner membrane subunit [Methylovorus sp. MP688] Length = 302 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ I++ + L +L ++ F P AAI+ IF S +W M + + + Sbjct: 149 PIIGILRPVSPLAWLPIGLLVFKAANP--------AAIWVIFISAIWPMIINTAVGVSKV 200 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V++ LS W+ + PF +P ++ + +S+ W +VA+EM+ G Sbjct: 201 PQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 255 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 6/136 (4%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN-LWLSL 454 +A+++ IP+G IG +S P +L + P + + + NP +W+ Sbjct: 125 LAALVGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLP--IGLLVFKAANPAAIWV-- 180 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + W ++ N G S P D+ VA +++ W+ I+ P + PY +TG + Sbjct: 181 -IFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSI 239 Query: 515 GGAWNASIVSEVASWG 530 G AW + +E+ + G Sbjct: 240 GVAWLVIVAAEMLTGG 255 >gi|255693778|ref|ZP_05417453.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides finegoldii DSM 17565] gi|260620401|gb|EEX43272.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides finegoldii DSM 17565] Length = 275 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 22/158 (13%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ ++L+ A S R +L P+LD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTCLALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYL 183 L A+ +F + ++ M + + + +P+++ E SRSF + WQ + + Sbjct: 144 --------GLGAVPGVFATIIFAMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKV 195 Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 +P ++P G+ +MMS+S VV + MI G Sbjct: 196 QLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 9/156 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AW G FT +L + +G T+ V+ +A I+ +P+G+W P Sbjct: 56 LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVLSSTCLALIVGVPLGVWTANSPR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++P L+ PA V+ + V ++ L + +IF + + G Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|159027354|emb|CAO90540.1| srpM [Microcystis aeruginosa PCC 7806] Length = 256 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 10/174 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+V +++AS I +P+G+ IG + S + Q + PL V + L Sbjct: 71 RVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFRPMISPLSWMPLAVMVLGIGDLP- 129 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + L+ W IL N AG +A + +A S T IILP I + +T Sbjct: 130 ---VYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQIILPAILSHLLT 186 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G A G W + +E+ + + GLG YI ++ ++ ++ E++ +L++ Sbjct: 187 GFRLAIGIIWIVLVQAEML------VVSAGLGYYILDTRDRLAYSELMAVILVI 234 >gi|171914151|ref|ZP_02929621.1| nitrate/nitrite ABC transporter membrane protein [Verrucomicrobium spinosum DSM 4136] Length = 296 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 12/173 (6%) Query: 93 SRRLGMVLVPILDIMQSI-PI----LGFLTFTVVYFMNLYPGKVIGA-ELAAIFAIFTSQ 146 S++ PI+ +++ + P+ LG + F+ V M+ GA + AA+F I Sbjct: 120 SKKFTTAFDPIIQVLRPVSPLAWLPLGMILFSGVKIMDSGGRTTFGASDAAALFTIAICA 179 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +P+D V++ +LS + W + VP ++P + +S+ W Sbjct: 180 MWPTVMNTAVGVRAVPQDYLNVAKVLKLSRTKTLWKVLVPATLPYMFTGFRLSLGIAWLV 239 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +VA EM+ PG+G ++ I+ +LT+ V ++ D+L+ Sbjct: 240 IVAVEMLT------GRPGVGGFLWQQYNANSFAHIILCILTIGVVGYVLDRLM 286 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 16/188 (8%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL---------VVSCVSYYHL 446 +A +I PVG +G ++ P Q+L + PL ++ Sbjct: 105 LALLIGTPVGFLLGLSKKFTTAFDPIIQVLRPVSPLAWLPLGMILFSGVKIMDSGGRTTF 164 Query: 447 NPNLWLSLLMI-FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + +L I W + N G A P D+ VA ++ + +++P PY Sbjct: 165 GASDAAALFTIAICAMWPTVMNTAVGVRAVPQDYLNVAKVLKLSRTKTLWKVLVPATLPY 224 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG + G AW + E+ + G+G ++ + SF ++L +L + Sbjct: 225 MFTGFRLSLGIAWLVIVAVEMLT------GRPGVGGFLWQQYNANSFAHIILCILTIGVV 278 Query: 566 VLALNRFL 573 L+R + Sbjct: 279 GYVLDRLM 286 >gi|317049220|ref|YP_004116868.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316950837|gb|ADU70312.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 281 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 12/181 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ RV+ ++A++I +P+GI +G + ++PF PA+ F PL++ Sbjct: 90 MTVMRVLAGFLLAALIGVPLGIMMGAYKMWEAFLEPFVSFCRYLPASAFVPLLILWAGIG 149 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+IF G+ + I+ V S+ D E A + + R +++PG Sbjct: 150 EMQ-----KILVIFIGSFFQIVLMVAVTVSSARRDLVEAAYTLGCSNRSIVRRVLIPGAA 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ +G+G I +S + +++ G++++ Sbjct: 205 PGIAELLRLVLGWAWTYVIVAELIG------SESGIGHMIVDSQALLNTGQIIFGIIVIG 258 Query: 564 C 564 C Sbjct: 259 C 259 >gi|188535297|ref|YP_001909094.1| taurine transporter subunit [Erwinia tasmaniensis Et1/99] gi|188030339|emb|CAO98228.1| Taurine transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 275 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I +PVGI +G + + P +L P + PL+V Sbjct: 81 AASLTRIVIALLAAVVIGVPVGILMGLNATLRGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + W+ +++LPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRLRAARSLGASRWQVLWFVVLPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 197 PEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIA 250 Query: 564 CFVLALN 570 AL Sbjct: 251 LIAFALE 257 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/151 (21%), Positives = 74/151 (49%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R++ A++ +++ L + L +L P++++ + +P L +L V++ Sbjct: 78 QHLAASLTRIVIALLAAVVIGVPVGILMGLNATLRGILDPLIELYRPVPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + + + +RS S WQ W+ Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRLRAARSLGASRWQVLWF 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 190 VVLPGALPEILTGVRIGLGVGWSTLVAAELI 220 >gi|121609547|ref|YP_997354.1| nitrate ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554187|gb|ABM58336.1| nitrate ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 328 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W +++ RV + +A+++ IP G IG P ++ P LL + PL Sbjct: 132 WNVLMSLQRVAIGFGMAALVGIPAGFVIGRMPFLARMFNPLISLLRPVSPLAWLPL--GL 189 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + N ++ + + W ++ N G P D+ VA +++ W+ I+LP Sbjct: 190 LVFKGANAAAIWTIFIC--SIWPMVINTAVGVQRVPQDYMNVARVLNLSEWQIATRILLP 247 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530 + PY +TG A G AW + +E+ + G Sbjct: 248 AVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 277 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 171 PLISLLRPVSPLAWLPLGLLVFK--------GANAAAIWTIFICSIWPMVINTAVGVQRV 222 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS WQ + +P +P ++ + +++ W +VA+EM+ G Sbjct: 223 PQDYMNVARVLNLSEWQIATRILLPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 277 >gi|328956608|ref|YP_004373994.1| aliphatic sulfonate ABC transporter [Carnobacterium sp. 17-4] gi|328672932|gb|AEB28978.1| aliphatic sulfonate ABC transporter [Carnobacterium sp. 17-4] Length = 245 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 29/220 (13%) Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----------ITMFRVVVLIIIASIIWIP 403 + + + W+ + Y+V H + + I+L ++FR++ I+I+ +I +P Sbjct: 12 IGLFLVWECLYYVVAHPVIPNPIKTIYLFIQLFPVLLPHIFSSLFRILSAILISILIGVP 71 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +GIWIG + + P L+ P F P+ + + L +SL++ W Sbjct: 72 LGIWIGASKWANKLLSPLLYLIYPIPKVAFLPVFMLL---FGLGDASKISLVV-----WI 123 Query: 464 ILFNVI----AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+F +I G + +V H + W+ + Y++ P I P ++G + C G Sbjct: 124 IVFQLILSVRDGIKQIDPSYYQVLRMMHASKWQTFIYLLYPAILPQIISG-LRVCIGIAV 182 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 AS+ + + GLG YI + +P++ G+ Sbjct: 183 ASLF-----FAENYATQYGLGYYIMNAWSVIDYPQMFCGI 217 >gi|149203199|ref|ZP_01880169.1| possible nitrate transport system permease protein [Roseovarius sp. TM1035] gi|149143032|gb|EDM31071.1| possible nitrate transport system permease protein [Roseovarius sp. TM1035] Length = 277 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 7/119 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E +AIF IF +W M + + + +D V+R+ L ++ + + +P + P +V Sbjct: 147 SEASAIFVIFICSIWPMLINTAFGVAGVRQDWVNVARTHELGHFKTAFTVILPAAAPTIV 206 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+G++ Sbjct: 207 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGIV 258 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ ++A+++ IP+G IG P + PF Q+L + PL + + Sbjct: 89 SIYRVLSGYLMAAVVAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFVIQDSE 148 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + + ++ +ILP P Sbjct: 149 AS-----AIFVIFICSIWPMLINTAFGVAGVRQDWVNVARTHELGHFKTAFTVILPAAAP 203 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 VTG + G AW + +E+ G TG+G Y+ Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 236 >gi|159898102|ref|YP_001544349.1| binding-protein-dependent transport systems inner membrane component [Herpetosiphon aurantiacus ATCC 23779] gi|159891141|gb|ABX04221.1| binding-protein-dependent transport systems inner membrane component [Herpetosiphon aurantiacus ATCC 23779] Length = 274 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 82/177 (46%), Gaps = 14/177 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L Q+ SRT + L ++ + V + A L ++ P L I+Q+IPI+ Sbjct: 74 LTQGALLQHTSRTLIEALGGFGLAFSASLVLGYILAHWHWLDRIVSPQLAIVQAIPIVAV 133 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 +++ K++ A L F + +S + +L ++PRD+ E++ + Sbjct: 134 APLILIWVGADLRAKLLVAALVTFFPMLSSVI--------VALRSVPRDIREMAAISGAN 185 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 WQ W + +P ++PG+ + ++ +A+ VV + + G+G+ I +A Sbjct: 186 RWQSLWQIELPLALPGIFGGIKTGLA------LATTGAVVAEFIGGREGLGALINIA 236 >gi|126464361|ref|YP_001045474.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|126106172|gb|ABN78702.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] Length = 276 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 11/189 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++++R++ + +A ++ +G+ IG + +P L P + P+++ Sbjct: 78 ALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISALMPIPTLAWTPILLLV--- 134 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ ++++ I + I++NV+ G VA+S + + RY+I+PGI Sbjct: 135 FGIDNRTTITVVFI-AASFEIIYNVVTGIEMMTRKTYWVAASMGASRLQTLRYVIIPGIL 193 Query: 504 PYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 PY +TG G AW A I +E +A+ H GLG I ++ E + G+L + Sbjct: 194 PYLITGLKLGVGYAWRALIAAEMLAASSH------GLGFMIYDAQEYMDMKSIYGGILTI 247 Query: 563 CCFVLALNR 571 L + R Sbjct: 248 SVLGLLIER 256 >gi|325292270|ref|YP_004278134.1| glycine/betaine transport system; permease protein [Agrobacterium sp. H13-3] gi|325060123|gb|ADY63814.1| Glycine/betaine transport system; permease protein [Agrobacterium sp. H13-3] Length = 302 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 16/170 (9%) Query: 68 TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL +++ A +I+++ L +S RL ++ P+LD+MQ++P +L VV F Sbjct: 109 TTLSIVAIATLIAIVIGLPLGILMGRSERLQRIINPVLDVMQTLPSFVYLIPVVVIF--- 165 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV G I+AI V +T S+ L + R++ E + +F S QK + + +P Sbjct: 166 GIGKVPGLIAVVIYAI--PPVIRLT-SLGIRLVD--REVLEAADAFGSSNGQKLFNVQLP 220 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++P ++ + ++ VV + M+ VG G+G + AI Q Sbjct: 221 LALPTIMTGINQTIMMALAMVVVASMVGVG-------GLGKNVLQAINNQ 263 >gi|114766329|ref|ZP_01445315.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Pelagibaca bermudensis HTCC2601] gi|114541446|gb|EAU44492.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Roseovarius sp. HTCC2601] Length = 360 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 15/186 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLS 453 +I S + IP+GI G P+ +S I P Q+ + P+V +S N L+ Sbjct: 165 LIGSCVAIPLGILAGLSPYANSAINPLVQIFKPVSPLAWLPIVTMIISAAVATNDGLFSK 224 Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 +I + W L N G ++ D V+ + W ++LP P Sbjct: 225 SFLISAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIF 284 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSS--LAKIMVAVFTI 336 Query: 568 ALNRFL 573 + FL Sbjct: 337 GIIGFL 342 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 9/118 (7%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + + +I +DL VS+ +++ W K L +P ++P + + +S+ GW Sbjct: 237 SLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWM 296 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + L I+ A+ T+ + FL D+++F Sbjct: 297 VLIAAEMLAQN------PGLGKFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMF 348 >gi|115360505|ref|YP_777642.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|115285833|gb|ABI91308.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] Length = 295 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 25/154 (16%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 A++ R+GM+L +LD MQ++P +L V+ F + P A +A I V Sbjct: 112 GARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVP-----AVIATIVFAMPPVVR 166 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 T + Q + +L E RSF + WQ W + +P ++P G+ +MM++S Sbjct: 167 LTTLGIRQ----VREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMALS--- 219 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI G G+G Y+ I+ D+ Sbjct: 220 -MVVVASMIGAG-------GLGEYVLSGIQRLDI 245 >gi|221200703|ref|ZP_03573744.1| glycine betaine transport system permease protein opuAB [Burkholderia multivorans CGD2M] gi|221206899|ref|ZP_03579910.1| glycine betaine transport system permease protein opuAB [Burkholderia multivorans CGD2] gi|221172973|gb|EEE05409.1| glycine betaine transport system permease protein opuAB [Burkholderia multivorans CGD2] gi|221179275|gb|EEE11681.1| glycine betaine transport system permease protein opuAB [Burkholderia multivorans CGD2M] Length = 295 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 25/154 (16%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 A++ R+GM+L +LD MQ++P +L V+ F + P A +A I V Sbjct: 112 GARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVP-----AVIATIVFAMPPVVR 166 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 T + Q + +L E RSF + WQ W + +P ++P G+ +MM++S Sbjct: 167 LTTLGIRQ----VREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMALS--- 219 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI G G+G Y+ I+ D+ Sbjct: 220 -MVVVASMIGAG-------GLGEYVLSGIQRLDI 245 >gi|184158672|ref|YP_001847011.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acinetobacter baumannii ACICU] gi|332874367|ref|ZP_08442278.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6014059] gi|183210266|gb|ACC57664.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii ACICU] gi|322507517|gb|ADX02971.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii 1656-2] gi|323518587|gb|ADX92968.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii TCDC-AB0715] gi|332737446|gb|EGJ68362.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6014059] Length = 279 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L +I ++A S+ L P ++SIP L ++ +++ Sbjct: 86 STWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+ + A F +T+ V ++ N+ + L EV + +RL+ +Q+ + +P Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRIISIILPA 197 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + PG++ + S+S W F++A+E+I Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225 >gi|293609438|ref|ZP_06691740.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827890|gb|EFF86253.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 279 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L +I ++A S+ L P ++SIP L ++ +++ Sbjct: 86 STWRVLLGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+ + A F +T+ V ++ N+ + L EV + +RL+ +Q+ + +P Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRIISIILPA 197 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + PG++ + S+S W F++A+E+I Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 25/179 (13%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +RV++ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 85 ISTWRVLLGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL------ 138 Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LWL + L+ G + N +A EV + + ++ I Sbjct: 139 -----LWLGIDEGSKITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISI 193 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ILP P +TG + +W I +E+ + T G+G +++ E S P++V Sbjct: 194 ILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRET-SRPDIV 245 >gi|296271876|ref|YP_003654507.1| binding-protein-dependent transporter inner membrane component [Arcobacter nitrofigilis DSM 7299] gi|296096051|gb|ADG92001.1| binding-protein-dependent transport systems inner membrane component [Arcobacter nitrofigilis DSM 7299] Length = 341 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 24/179 (13%) Query: 65 ASRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 AS TTL + +++++ S+L +AKS + +L PILD MQ+ P +L V+ F Sbjct: 128 ASMTTLALVITSVLFSVLIGLPLGIWSAKSDMVEKILRPILDGMQTTPAFVYLIPIVMLF 187 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 G V G + IFA+ + +T + +P DL E SRSF S Q + + Sbjct: 188 ---GIGNVPGVIVTIIFAL--PPLIRLT---NLGIRQVPADLIEASRSFGASSSQMLFKV 239 Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P +MP G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 240 QLPVAMPTIMAGINQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDI 287 >gi|149199053|ref|ZP_01876093.1| possible nitrate transport system permease protein [Lentisphaera araneosa HTCC2155] gi|149137842|gb|EDM26255.1| possible nitrate transport system permease protein [Lentisphaera araneosa HTCC2155] Length = 275 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 7/130 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E +AIF IF +W M + + N+ +D +V+++ LS + + + +P S P + Sbjct: 145 SEKSAIFVIFICSIWPMLLNTAFGVANVRKDWVKVAQTHELSKLKTAFSVILPASAPTIF 204 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG Y+ DL +++++++ M+G++ Sbjct: 205 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLNSVIFSII-MIGLVG 257 Query: 254 LYDQLLFRPM 263 + L+ + Sbjct: 258 MTLDLILNAL 267 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ A+ I IP+G +G + + PF Q+L + PL + + Sbjct: 87 SLVRVLLGFFAAAAIAIPLGFVVGMSELMYKALNPFIQILKPISPLAWMPLALFVIKDSE 146 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ +VA + ++ + +ILP P Sbjct: 147 KS-----AIFVIFICSIWPMLLNTAFGVANVRKDWVKVAQTHELSKLKTAFSVILPASAP 201 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 TG + G AW + +E+ G TG+G Y+ Sbjct: 202 TIFTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 234 >gi|298372810|ref|ZP_06982800.1| ABC transporter, permease protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275714|gb|EFI17265.1| ABC transporter, permease protein [Bacteroidetes oral taxon 274 str. F0058] Length = 258 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 +F+L+ VL + + N +L P D+ I+P V + ++ + R+L+ +VI Sbjct: 22 VFNLIWLVLALALRNKILPN------PIDVYRIMPQEF-VAGMGRHVMASLWRVLAGIVI 74 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 +LLF V A S+RL +L P+L + +P L L ++ F K++ L Sbjct: 75 ALLFGVVGGLATAFSKRLNKILEPLLYLSYPVPKLALLPVVMIVFGIDEASKIVMIVLIV 134 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 +F + S+ ++ +IPRD V S + WQ ++ +P ++P + Sbjct: 135 VF--------QLMISIRDAIRHIPRDNYYVLMSLGATKWQNIRHIIIPATLPSI 180 >gi|85705781|ref|ZP_01036878.1| possible nitrate transport system permease protein [Roseovarius sp. 217] gi|85669771|gb|EAQ24635.1| possible nitrate transport system permease protein [Roseovarius sp. 217] Length = 277 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 7/119 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E +AIF IF +W M + + + +D V+R+ L + + + +P + P +V Sbjct: 147 SEASAIFVIFICSIWPMLINTAFGVAGVRKDWVNVARTHELGHLKTAFTVILPAAAPTIV 206 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+G++ Sbjct: 207 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSIL-MIGIV 258 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ ++A+++ IP+G IG P + PF Q+L + PL + + Sbjct: 89 SIYRVLSGYLMAALVAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFIIQDSE 148 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + + + +ILP P Sbjct: 149 AS-----AIFVIFICSIWPMLINTAFGVAGVRKDWVNVARTHELGHLKTAFTVILPAAAP 203 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 VTG + G AW + +E+ G TG+G Y+ Sbjct: 204 TIVTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 236 >gi|295111611|emb|CBL28361.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synergistetes bacterium SGP1] Length = 256 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT+ RV + + A I +P+G+ +G + P+ + P + PL + ++ Sbjct: 59 ITLMRVFMGCVYAVAIGLPLGLLMGSSRTALVALSPYVNSIRQVPIMAWVPL---SIIWF 115 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L + ++ + IL N I+G ++K A W+ R +++PG P Sbjct: 116 GLGDGPTI-FMIAMSAVFPILINTISGVMNIDPNYKNAARCMGAGTWQVLRDVVVPGALP 174 Query: 505 YYVTGAITACGGAWNASIVSE 525 ++TG A GGAW + I +E Sbjct: 175 SFLTGCRLALGGAWMSVICAE 195 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 16/191 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T +R+ V ++ L SR + L P ++ ++ +PI+ ++ ++++F L Sbjct: 60 TLMRVFMGCVYAVAIGLPLGLLMGSSRTALVALSPYVNSIRQVPIMAWVPLSIIWF-GLG 118 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G I F I S V+ + + + NI + + +R WQ + VP Sbjct: 119 DGPTI-------FMIAMSAVFPILINTISGVMNIDPNYKNAARCMGAGTWQVLRDVVVPG 171 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + +++ G W V+ +E I G G YI + + + +LYA++ Sbjct: 172 ALPSFLTGCRLALGGAWMSVICAEFIATSK------GFG-YIMVEAQVRMNTPLLYALMI 224 Query: 248 MLGVI-FLYDQ 257 M ++ F D+ Sbjct: 225 MSALVGFAMDK 235 >gi|297618552|ref|YP_003706657.1| binding-protein-dependent transport systems inner membrane component [Methanococcus voltae A3] gi|297618612|ref|YP_003706717.1| binding-protein-dependent transport systems inner membrane component [Methanococcus voltae A3] gi|297377529|gb|ADI35684.1| binding-protein-dependent transport systems inner membrane component [Methanococcus voltae A3] gi|297377589|gb|ADI35744.1| binding-protein-dependent transport systems inner membrane component [Methanococcus voltae A3] Length = 278 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 93/197 (47%), Gaps = 25/197 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + T ++++ +I+L+F + A+S+++ ++L P+LD MQ++P L +L V++ Sbjct: 90 EISMNTLALIITSTLIALIFGIPLGIMKARSKKVELLLNPLLDFMQTLPSLAYLIPAVLF 149 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR---DLEEVSRSFRLSGWQ 178 F + PG + ++ ++ M ++ + I + L EV SF + WQ Sbjct: 150 FGTGVAPG------------VLSTVIFAMPPTIRLTALGIEQVSDQLVEVGESFGATSWQ 197 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P +MP ++ + ++ + VV S I G G+G I I+ L Sbjct: 198 ILTKIELPTAMPSILMGINQTILLSFSMVVISGFIGSG-------GLGDSIISGIQRYSL 250 Query: 239 LAILYA--MLTMLGVIF 253 L A +T L VIF Sbjct: 251 APALEAGIAVTFLAVIF 267 >gi|300775527|ref|ZP_07085388.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Chryseobacterium gleum ATCC 35910] gi|300505554|gb|EFK36691.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Chryseobacterium gleum ATCC 35910] Length = 275 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 23/166 (13%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + +L+ + LAAKS+ ++ P+LD+MQ++P +L V++F GKV GA Sbjct: 100 ITALILSIPLGILAAKSKIADKIIRPLLDLMQTMPAFVYLIPAVLFF---SIGKVPGAFA 156 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GL 192 IFA+ +T ++ +P+D+ E +R+F +G Q + + +P +M G+ Sbjct: 157 TIIFAM--PPAVRLTALGIEA---VPKDIVEAARAFGATGRQILFKVELPLAMKTILTGI 211 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +++S+S VV + MI G G+G + I D+ Sbjct: 212 NQTILLSLS----MVVIAGMIAAG-------GLGEKVLEGINNLDI 246 >gi|134093701|ref|YP_001098776.1| nitrate ABC transporter permease [Herminiimonas arsenicoxydans] gi|133737604|emb|CAL60647.1| Nitrate transport permease protein nrtB [Herminiimonas arsenicoxydans] Length = 304 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP+G IG +S P LL + P + + + Sbjct: 113 SLKRVAVGFGLAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLP--IGLLVFKA 170 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +P S+ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 171 ADPAAIWSIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILFPSVLPY 228 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 229 MLTGVRLAIGTAWLVIVAAEMLTGG 253 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 28/226 (12%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62 ++++ P F+S + P IF +L VLV II+ GI V + +D+ + P Sbjct: 44 MFSLRPFFMS--VVPPIFGVLFLVLVWEIISAKNSGIPSPAV------TLKSAIDLFADP 95 Query: 63 QYASRTTLRMLS-AMVISLLFTFVYATLAA-----------KSRRLGMVLVPILDIMQSI 110 Y++ + + ++ SL V LAA + + L + PI+ +++ + Sbjct: 96 FYSNGPNDQGIGWNILASLKRVAVGFGLAALVGIPLGFMIGRFKFLSGMFNPIISLLKPV 155 Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170 L +L ++ F A+ AAI++IF +W M + + +P+D V+R Sbjct: 156 SPLAWLPIGLLVFK--------AADPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVAR 207 Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 208 VLNLSEWKIVTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG 253 >gi|114705670|ref|ZP_01438573.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Fulvimarina pelagi HTCC2506] gi|114538516|gb|EAU41637.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Fulvimarina pelagi HTCC2506] Length = 364 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 19/202 (9%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A+II +PVGI G I+ + P Q+ + P+V VS ++N + L Sbjct: 169 LLATIIAVPVGIACGLSSTINGALNPLIQIFKPVSPLAWLPIVTMIVSALYVNASDALPK 228 Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 M+ + W L N G ++ D V ++ + ++LP P Sbjct: 229 SMVVSAITVTLCSLWPTLINTSLGVASIDKDLVNVGKVLQLSTAKTITKLVLPSAMPLIF 288 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S +++ V+ + Sbjct: 289 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARIIVAVITIGI 342 Query: 565 FVLALNRF---LWHPLYLYGTR 583 L+R L GTR Sbjct: 343 VGFILDRIMAALQSAFTFSGTR 364 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 9/116 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL V + +LS + L +P +MP + + +S+ GW Sbjct: 242 LWPTLINTSLGVASIDKDLVNVGKVLQLSTAKTITKLVLPSAMPLIFTGLRLSLGVGWMV 301 Query: 207 VVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLL 259 ++A+EM+ PG+G ++ D LA I+ A++T+ V F+ D+++ Sbjct: 302 LIAAEMLAQN------PGLGKFVWDEFQNGSSDSLARIIVAVITIGIVGFILDRIM 351 >gi|83590806|ref|YP_430815.1| binding-protein dependent transport system inner membrane protein [Moorella thermoacetica ATCC 39073] gi|83573720|gb|ABC20272.1| Binding-protein-dependent transport systems inner membrane component [Moorella thermoacetica ATCC 39073] Length = 261 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 20/194 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++FR ++A+++ IP+G+ +G+ + + P Q+L + PLV Sbjct: 59 AVSLFRFFSGYLVAAVVAIPLGLLLGWSRRLWIAVDPLVQVLRPISPIAWLPLVTLWFGI 118 Query: 444 YHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITG----WRWWRYII 498 L ++++IF +Y IL IA + +VA +F +G WR +I Sbjct: 119 GDLP-----AIVIIFMASFYPILLGTIAAVKNVDPVYIKVAKNFGASGSHILWR----VI 169 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P FPY G A G AW + E+ +GLG I ++ V+ G Sbjct: 170 VPAAFPYITMGLHFALGTAWIFLVAGEMMG------VRSGLGFLIIDARNSMDTGLVIAG 223 Query: 559 VLIMCCFVLALNRF 572 +L++ LA++R Sbjct: 224 MLVIGLLGLAIDRL 237 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 15/216 (6%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D++ + L L ++ + + R S +++ + L SRRL + + P++ Sbjct: 38 PGDVLQSLSQQLHQGVLGEHIAVSLFRFFSGYLVAAVVAIPLGLLLGWSRRLWIAVDPLV 97 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 +++ I + +L ++F IG +L AI IF + + + ++ N+ Sbjct: 98 QVLRPISPIAWLPLVTLWFG-------IG-DLPAIVIIFMASFYPILLGTIAAVKNVDPV 149 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 +V+++F SG W + VP + P + + ++ W F+VA EM+ V G Sbjct: 150 YIKVAKNFGASGSHILWRVIVPAAFPYITMGLHFALGTAWIFLVAGEMMGVRS------G 203 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +G I A D ++ ML ++G++ L LF Sbjct: 204 LGFLIIDARNSMDTGLVIAGML-VIGLLGLAIDRLF 238 >gi|33603283|ref|NP_890843.1| putative transport system permease protein [Bordetella bronchiseptica RB50] gi|33577407|emb|CAE34672.1| putative transport system permease protein [Bordetella bronchiseptica RB50] Length = 265 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FR +V I + +P G++ G+ + + + P + P F P+ V Y+ Sbjct: 75 SLFRALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPM---AVLYFG 131 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFP 504 L + +L++F Y + AGA + P + A S +T + +WR ++ P P Sbjct: 132 LG-EMGKVVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTKLQIFWR-VVFPSSIP 189 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + TG A +W + +E+ GLG I+++ + P V +G+ ++ Sbjct: 190 HIFTGLKVAMALSWAVVVAAELVG------AQKGLGFMISDAAQLFQIPVVFIGIALIGL 243 Query: 565 FVLALNRFL 573 L LN L Sbjct: 244 IGLVLNVML 252 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 10/152 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R L I +L + + + +G ++ PI+ ++ IP + F+ V+Y Sbjct: 70 DHVGASLFRALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLY 129 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSGWQKFW 181 F GKV+ +FT+ +N +F Q+ ++P + S ++ Q FW Sbjct: 130 FGLGEMGKVV-------LIVFTA--FNYSFVSAQAGALSVPMSYYRAAESIGMTKLQIFW 180 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + P S+P + + ++M+ W VVA+E++ Sbjct: 181 RVVFPSSIPHIFTGLKVAMALSWAVVVAAELV 212 >gi|113868975|ref|YP_727464.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527751|emb|CAJ94096.1| ABC-type transporter, permease component: TauT family [Ralstonia eutropha H16] Length = 289 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 12/181 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV ++A+++ +P+GI++G + +PF PA+ F PL++ Sbjct: 97 MTVWRVVGGFVLAAVLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIG 156 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+IF G+ + I+ V D E A + R +++PG Sbjct: 157 ETQ-----KLLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGIVRRVLIPGAA 211 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 212 PEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 265 Query: 564 C 564 C Sbjct: 266 C 266 >gi|260426707|ref|ZP_05780686.1| binding-protein-dependent transport systems inner membrane component [Citreicella sp. SE45] gi|260421199|gb|EEX14450.1| binding-protein-dependent transport systems inner membrane component [Citreicella sp. SE45] Length = 394 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 15/186 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLS 453 +I S + IP+GI G P+ +S I P Q+ + P+V +S N L+ Sbjct: 199 LIGSCVAIPLGILAGLSPYANSAINPLVQIFKPVSPLAWLPIVTMIISAAVATNDGLFSK 258 Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 +I + W L N G ++ D V+ + W ++LP P Sbjct: 259 SFLISAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIF 318 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 319 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSS--LAKIMVAVFTI 370 Query: 568 ALNRFL 573 + FL Sbjct: 371 GIIGFL 376 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 9/118 (7%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + + +I +DL VS+ +++ W K L +P ++P + + +S+ GW Sbjct: 271 SLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWM 330 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + L I+ A+ T+ + FL D+++F Sbjct: 331 VLIAAEMLAQN------PGLGKFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMF 382 >gi|323490330|ref|ZP_08095545.1| glycine betaine ABC transporter permease [Planococcus donghaensis MPA1U2] gi|323396000|gb|EGA88831.1| glycine betaine ABC transporter permease [Planococcus donghaensis MPA1U2] Length = 276 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 25/172 (14%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + A +T ++ + +IS++ LAA ++ + ++ PILD MQ++P +L ++ Sbjct: 88 EAAMQTVAIVIVSTLISVIIGIPVGILAATNKTMANIVRPILDFMQTLPSFVYLIPAILL 147 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + P + A F T MT + +P D+ E S++F + WQ + Sbjct: 148 FGLGNVPAVI------ATFVFATPPAVRMT---TLGILQVPADVVEASKAFGSTKWQLLY 198 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 + +P +MP G+ MM+++S V+AS +I PG+GS + Sbjct: 199 KVQLPLAMPSIMAGINQTMMLALS---MAVIAS--------MIGAPGLGSVV 239 >gi|283784185|ref|YP_003364050.1| taurine ABC transporter permease [Citrobacter rodentium ICC168] gi|282947639|emb|CBG87194.1| taurine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 277 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 19/201 (9%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A+I+ IPVGI +G P I + P +L P + PL+V Sbjct: 83 AASLTRIVLALLAAAIVGIPVGIAMGLSPAIRGVLDPIIELYRPVPPLAYLPLMVIWFGI 142 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 143 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRLRAAQSLGASRSQVLWFVILPGAL 198 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 199 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 252 Query: 564 --CFVL-----ALNRFL--WH 575 F+L AL R L WH Sbjct: 253 VIAFMLELGLRALQRRLTPWH 273 >gi|27380844|ref|NP_772373.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354009|dbj|BAC50998.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV ++A ++ IP+G IG P +S + PF Q+L + PL + + Sbjct: 147 SIARVGTGYLLAVLVAIPLGFLIGMSPLLSKALDPFIQVLKPISPLAWMPLALYTIKDSS 206 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ ++ +IF + W +L N + G ++ ++ VA + + R +ILP P Sbjct: 207 IS-----AIFVIFICSIWPMLLNTVFGVASVRKEWINVARTLEVGTIRRAFTVILPAAAP 261 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V++ +L++ Sbjct: 262 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILLIGI 315 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 316 VGMLLDQIL 324 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + ++AIF IF +W M + + ++ ++ V+R+ + ++ + + +P + P ++ Sbjct: 205 SSISAIFVIFICSIWPMLLNTVFGVASVRKEWINVARTLEVGTIRRAFTVILPAAAPTIL 264 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ + ++ A+L + V Sbjct: 265 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILLIGIVGM 318 Query: 254 LYDQLLFR 261 L DQ+L R Sbjct: 319 LLDQILAR 326 >gi|330891567|gb|EGH24228.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. mori str. 301020] Length = 283 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS VI V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAARVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + S ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 G ++ + +L A++ + + L D LL + + W + F + G Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 282 >gi|251790233|ref|YP_003004954.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] gi|247538854|gb|ACT07475.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] Length = 528 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 16/195 (8%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 PR++ + L L + + R L+ + + L +SR +L P+ Sbjct: 313 TPREVATTLLAGLSNGELTSALAASLSRTLAGFALGAGLGCLLGGLLGRSRVADRLLTPL 372 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L ++S+ + +L +F KV+ LAA F + YQ + ++P Sbjct: 373 LSALRSVALFAWLPLLTAWFGLEESVKVVFIALAAFFPTL--------LASYQGVRHLPP 424 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E +R RL+ Q+ +L +P +P L + +S+ W + +E + Sbjct: 425 SLLETARVLRLNARQRLRWLTLPAVLPALFSGIRLSLMHAWVGTIGAEYFIASGN----- 479 Query: 224 GIGSYIALAIKEQDL 238 GIGS + I+ Q L Sbjct: 480 GIGSMM---IRAQQL 491 >gi|254560198|ref|YP_003067293.1| nitrate transport system permease [Methylobacterium extorquens DM4] gi|254267476|emb|CAX23317.1| nitrate transport system permease protein [Methylobacterium extorquens DM4] Length = 284 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A ++ IPVG IG P +S + P+ Q+L + PL + + Sbjct: 96 SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 155 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N + G + ++ VA + ++ R +ILP P Sbjct: 156 LS-----AIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAP 210 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V+ +L++ Sbjct: 211 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGL 264 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 265 VGMVLDQLL 273 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+AIF IF +W M + + ++ V+R+ +S ++ + + +P + P ++ Sbjct: 154 SSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAPTIL 213 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ + ++ ++L + V Sbjct: 214 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGM 267 Query: 254 LYDQLLFR 261 + DQLL R Sbjct: 268 VLDQLLAR 275 >gi|258424287|ref|ZP_05687168.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A9635] gi|257845553|gb|EEV69586.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A9635] Length = 253 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++R V ++A ++ IP+G +G + + I+P QL+ + P VV Sbjct: 61 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L ++ + I FN I G + ++A++ ++TGW +R I+ PG F Sbjct: 121 ----GSLPAIAIIFIAAFFPIAFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAF 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ +GLG I ++ + +V+ + + Sbjct: 177 KQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFIG 230 Query: 564 CFVLALNRFL 573 F ++RF+ Sbjct: 231 LFGFIIDRFI 240 >gi|242278151|ref|YP_002990280.1| glycine/betaine ABC transporter permease [Desulfovibrio salexigens DSM 2638] gi|242121045|gb|ACS78741.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio salexigens DSM 2638] Length = 278 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 70/132 (53%), Gaps = 18/132 (13%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +++LLF LAA ++ + +++P+LD+MQ++P +L + +F L Sbjct: 102 LLALLFGIPIGILAAMNKHVNKIVMPVLDVMQTMPAFVYLIPAIPFF-----------GL 150 Query: 137 AAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP--- 190 + AIF++ ++ M S+ + + +P +L E + +F + WQ+ + L +P + P Sbjct: 151 GKVAAIFSTIIFAMPPSIRLTCLGIKQVPEELVECAEAFGSNRWQRLFKLELPIATPTIM 210 Query: 191 -GLVWNMMMSMS 201 G+ +M+++S Sbjct: 211 AGVNQTVMLALS 222 >gi|153808445|ref|ZP_01961113.1| hypothetical protein BACCAC_02739 [Bacteroides caccae ATCC 43185] gi|149128767|gb|EDM19984.1| hypothetical protein BACCAC_02739 [Bacteroides caccae ATCC 43185] Length = 275 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 22/158 (13%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ ++L+ A S R +L P+LD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTCLALVVGVPLGIWTANSPRADKILRPVLDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYL 183 L A+ +F + ++ M + + + +P+++ E SRSF + WQ + + Sbjct: 144 --------GLGAVPGVFATIIFAMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKV 195 Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 +P ++P G+ +MMS+S VV + MI G Sbjct: 196 QLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 9/155 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 AW G FT +L + +G T+ V+ +A ++ +P+GIW P Sbjct: 57 AWMKAGRGTAIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLALVVGVPLGIWTANSPRA 116 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++P L+ PA V+ + V ++ L + +IF + + G Sbjct: 117 DKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIRQ 172 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 173 VPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|297539843|ref|YP_003675612.1| nitrate ABC transporter inner membrane subunit [Methylotenera sp. 301] gi|297259190|gb|ADI31035.1| nitrate ABC transporter, inner membrane subunit [Methylotenera sp. 301] Length = 325 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F P AAI+ IF S +W M + + + Sbjct: 172 PIISLLRPVSPLAWLPIGLLVFKAANP--------AAIWVIFISAIWPMIINTSVGVSKV 223 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V++ LS W+ + PF +P ++ + +S+ W +VA+EM+ G Sbjct: 224 PQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 278 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG +S P LL + P + + + Sbjct: 138 SLQRVALGFSLAALVGIPLGFIIGRFEFMSRMTSPIISLLRPVSPLAWLP--IGLLVFKA 195 Query: 446 LNPN-LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP +W+ + W ++ N G S P D+ VA +++ W+ I+ P + P Sbjct: 196 ANPAAIWV---IFISAIWPMIINTSVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFVLP 252 Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530 Y +TG + G AW + +E+ + G Sbjct: 253 YMMTGVRLSIGVAWLVIVAAEMLTGG 278 >gi|51892790|ref|YP_075481.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51856479|dbj|BAD40637.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 255 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL ++ T +L+ M I +L F LA R +L+ + IM +P + L Sbjct: 50 SLLRHTLHTLQMVLTGMSIGILTAFCLTALATAGRWGRDLLLTLTTIMNPLPAIALLPVA 109 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ + + P ++ F I S VW++ +M+ +P + ++ L GW Sbjct: 110 LLW-LGIGPRSLV-------FVIANSVVWSLALNMHTGFETVPLTWRQAGQNLGLRGWGL 161 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ +P ++P ++ + ++ S GW V+A+E++ Sbjct: 162 IRHVYLPAALPYILTGVKIAWSFGWRTVIAAELV 195 >gi|311108302|ref|YP_003981155.1| nitrate ABC transporter permease [Achromobacter xylosoxidans A8] gi|310762991|gb|ADP18440.1| nitrate ABC transporter, permease protein [Achromobacter xylosoxidans A8] Length = 276 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A++I IP G IG + + P LL P + L + + + Sbjct: 87 SLERVAIGFGLAALIGIPAGFAIGRYAAVRAMFSPIVSLLR--PVSPLAWLPLGLLLFKA 144 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G S P D+ VA +++ W+ ++LP + PY Sbjct: 145 ANPAAIWAIFIC--SIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPY 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +TG + G AW + +E+ + G TG+G ++ + +V+ + ++ Sbjct: 203 VLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIAIFVI 253 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 45/87 (51%) Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 A AAI+AIF +W M + + +P+D V+R LS W+ + +P +P + Sbjct: 144 AANPAAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPYV 203 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTV 219 + + +S+ W +VA+EM+ G + Sbjct: 204 LTGVRLSIGTAWLVIVAAEMLTGGTGI 230 >gi|114332018|ref|YP_748240.1| binding-protein-dependent transport systems inner membrane component [Nitrosomonas eutropha C91] gi|114309032|gb|ABI60275.1| binding-protein-dependent transport systems inner membrane component [Nitrosomonas eutropha C91] Length = 278 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 93/188 (49%), Gaps = 16/188 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + M+I LL + A + + L +++P++ + I + ++ FT+V Sbjct: 92 RVGAGMLIGLLVSSCLAIMVIELPILRRLILPLVQSLAPIAPVAWIPFTIV--------- 142 Query: 131 VIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 VIG AA+F +F + + MT S+ +L +IP + +++ + S + +WY+ +P + Sbjct: 143 VIGIGGPAAVFIVFMAVLGTMTLSLIAALDSIPDEYLKIAHNLGTSRIRMWWYIRLPAII 202 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P + + MS G W V+A EM + G+G I +A + ++ ++ +L + Sbjct: 203 PSTMTAIRMSFFGAWMAVLAGEMAGLNS------GLGYMIIMAQQMYNMKLVMVGILAIG 256 Query: 250 GVIFLYDQ 257 + F D+ Sbjct: 257 FIGFAIDR 264 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 10/188 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 IT+ RV ++I ++ + I + P + I P Q LA + P + + Sbjct: 87 TITLGRVGAGMLIGLLVSSCLAIMVIELPILRRLILPLVQSLAPIAPVAWIPFTIVVIGI 146 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +++ + + GT + ++IA + P+++ ++A + + R W YI LP I Sbjct: 147 GG-PAAVFIVFMAVLGT---MTLSLIAALDSIPDEYLKIAHNLGTSRIRMWWYIRLPAII 202 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +T + GAW A + E+A +GLG I + + + V++G+L + Sbjct: 203 PSTMTAIRMSFFGAWMAVLAGEMAG------LNSGLGYMIIMAQQMYNMKLVMVGILAIG 256 Query: 564 CFVLALNR 571 A++R Sbjct: 257 FIGFAIDR 264 >gi|270262342|ref|ZP_06190614.1| transporter [Serratia odorifera 4Rx13] gi|270044218|gb|EFA17310.1| transporter [Serratia odorifera 4Rx13] Length = 294 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 133 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASTWTIFICSIWPMILNTA 184 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ Sbjct: 185 EGVARIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVIVAAEMLTG 244 Query: 216 G 216 G Sbjct: 245 G 245 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 6/151 (3%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A+++ IP G +G +++ + P LL + P + Sbjct: 100 WNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLP--IGL 157 Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + P S IF + W ++ N G + P D+ VA ++ W R I+ Sbjct: 158 LLFQRAEP---ASTWTIFICSIWPMILNTAEGVARIPQDYLNVARVLKLSEWTVMRKILF 214 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWG 530 P + PY +TG + G AW + +E+ + G Sbjct: 215 PAVLPYVLTGVRLSIGIAWLVIVAAEMLTGG 245 >gi|169795525|ref|YP_001713318.1| putative binding-protein-dependent transport systems inner membrane component [Acinetobacter baumannii AYE] gi|215483012|ref|YP_002325217.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB307-0294] gi|301344982|ref|ZP_07225723.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB056] gi|301513508|ref|ZP_07238745.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB058] gi|301597423|ref|ZP_07242431.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB059] gi|332850711|ref|ZP_08432958.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013150] gi|332866988|ref|ZP_08437305.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013113] gi|169148452|emb|CAM86318.1| putative binding-protein-dependent transport systems inner membrane component [Acinetobacter baumannii AYE] gi|213986297|gb|ACJ56596.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB307-0294] gi|332730548|gb|EGJ61864.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013150] gi|332734317|gb|EGJ65445.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013113] Length = 279 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L +I ++A S+ L P ++SIP L ++ +++ Sbjct: 86 STWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 145 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+ + A F +T+ V ++ N+ + L EV + +RL+ +Q+ + +P Sbjct: 146 GSKITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRIISIILPA 197 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + PG++ + S+S W F++A+E+I Sbjct: 198 ASPGILTGLRNSLSLSWMFMIAAELIAA 225 >gi|227509979|ref|ZP_03940028.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane-spanning subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190585|gb|EEI70652.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane-spanning subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 283 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 27/199 (13%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS+ + +++ PILD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG + + IFA+ T ++ N+ + +P DL E + S+ + WQK + Sbjct: 154 GMVPGVI----ASVIFAMPPTIRMTNL------GIRQVPEDLIEAADSYGSTSWQKLIKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 +P + M G+ +MM+S+S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPLAKSTLMAGVNQSMMLSLS----------MVVIA-SMIGAMGLGNKVYFAVGRNDAG 252 Query: 240 AILYAMLTMLGVIFLYDQL 258 + A L ++ + + D++ Sbjct: 253 SGFAAGLAIVILAIILDRI 271 >gi|163850577|ref|YP_001638620.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|163662182|gb|ABY29549.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] Length = 279 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A ++ IPVG IG P +S + P+ Q+L + PL + + Sbjct: 91 SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N + G + ++ VA + ++ R +ILP P Sbjct: 151 LS-----AIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V+ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGL 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMVLDQLL 268 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+AIF IF +W M + + ++ V+R+ +S ++ + + +P + P ++ Sbjct: 149 SSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAPTIL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ + ++ ++L + V Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGM 262 Query: 254 LYDQLLFR 261 + DQLL R Sbjct: 263 VLDQLLAR 270 >gi|157372796|ref|YP_001480785.1| taurine transporter subunit [Serratia proteamaculans 568] gi|157324560|gb|ABV43657.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] Length = 279 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 21/202 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R++V ++ A II +PVGI +G + + P ++ P + PL+V Sbjct: 85 AASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGI 144 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A + W+ R+++LP Sbjct: 145 GETS-KILLIYLAIFAP---VTLSAVAGVRSVAQVRVRAARALGANRWQLLRFVVLPSAL 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVL 560 P +TG G W+ + +E+ + T GLG ++ +S + +VVL GV+ Sbjct: 201 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIGVI 253 Query: 561 IMCCFVL-----ALNRFL--WH 575 + F L AL R L WH Sbjct: 254 AIIAFGLELGLRALQRRLTPWH 275 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P+++I + +P L +L V++F IG E + I I+ + +T S + Sbjct: 118 ILDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLSAVAGV 169 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ + WQ ++ +P ++P ++ + + + GW +VA+E+I Sbjct: 170 RSVAQVRVRAARALGANRWQLLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 224 >gi|222055625|ref|YP_002537987.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221564914|gb|ACM20886.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 300 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 12/173 (6%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A I +P+G+ IG+R + + PF ++L P V+ P ++ + + S+ Sbjct: 120 LLALITGVPLGLLIGWRGRLFRAVNPFTKVLGPIPPIVYIPYAIALLPSFRAA-----SI 174 Query: 455 LMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 +IF G W I N + G P + A ++ +ILPG P TGA A Sbjct: 175 FVIFIGAFWPIFINTVNGVFNIPKGLIDSARVLNLRETTLLFRVILPGAMPSICTGATLA 234 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 ++ +++ G +G+G Y+ + + V++G++ + V Sbjct: 235 L--VFSLVLLTAAELIGA----NSGIGWYVKNFADFADYQRVIVGIIFISLVV 281 >gi|171316280|ref|ZP_02905502.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] gi|171098602|gb|EDT43401.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] Length = 295 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 25/154 (16%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 A++ R+GM+L +LD MQ++P +L V+ F + P A +A I V Sbjct: 112 GARNSRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVP-----AVIATIVFAMPPVVR 166 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 T + Q + +L E RSF + WQ W + +P ++P G+ +MM++S Sbjct: 167 LTTLGIRQ----VREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMALS--- 219 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI G G+G Y+ I+ D+ Sbjct: 220 -MVVVASMIGAG-------GLGEYVLSGIQRLDI 245 >gi|145589179|ref|YP_001155776.1| nitrate ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047585|gb|ABP34212.1| nitrate ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 286 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + ++A I+ IP G WIG P PF Q+L PL ++ Y Sbjct: 98 SLARVALGFLLAMIVAIPFGFWIGMSPLAYEAFNPFIQILKPIS-----PLAWMPIALYT 152 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + +IF + W +L N G + + VA + ++ R +ILP P Sbjct: 153 IKDSAISGIFVIFICSVWPMLLNTAFGVANVRKELLNVAKTLEVSPLRKAFLVILPAAAP 212 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +TG + G AW + +E+ G TG+G ++ S V+ +L++ Sbjct: 213 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFLWNEWNNLSLSSVIFAILLI 264 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 65/119 (54%), Gaps = 7/119 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + ++ IF IF VW M + + N+ ++L V+++ +S +K + + +P + P ++ Sbjct: 156 SAISGIFVIFICSVWPMLLNTAFGVANVRKELLNVAKTLEVSPLRKAFLVILPAAAPTIL 215 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 M +SM W +VA+EM+V G GIG ++ L ++++A+L ++G++ Sbjct: 216 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFLWNEWNNLSLSSVIFAIL-LIGIV 267 >gi|90419876|ref|ZP_01227785.1| permease protein, ABC-type nitrate/sulfonate/bicarbonate transport system [Aurantimonas manganoxydans SI85-9A1] gi|90335917|gb|EAS49665.1| permease protein, ABC-type nitrate/sulfonate/bicarbonate transport system [Aurantimonas manganoxydans SI85-9A1] Length = 364 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 16/189 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A+II IPVGI G I+ + P Q+ + P+V VS ++N + + Sbjct: 169 VLATIIAIPVGIACGLSATINGALNPLIQIFKPVSPLAWLPIVTMIVSALYVNASDAVPK 228 Query: 455 LMIFG-------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 M+ + W L N G ++ D V + + ++LP P Sbjct: 229 SMVVSAITVTLCSLWPTLINTALGVASIDKDLVNVGKVLQLPTHKTITKLVLPSAMPLIF 288 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S +++ V+ + Sbjct: 289 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARIIVAVITIGI 342 Query: 565 FVLALNRFL 573 L+R + Sbjct: 343 VGFMLDRIM 351 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 9/116 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL V + +L + L +P +MP + + +S+ GW Sbjct: 242 LWPTLINTALGVASIDKDLVNVGKVLQLPTHKTITKLVLPSAMPLIFTGLRLSLGVGWMV 301 Query: 207 VVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLL 259 ++A+EM+ PG+G ++ D LA I+ A++T+ V F+ D+++ Sbjct: 302 LIAAEMLAQN------PGLGKFVWDEFQNGSSDSLARIIVAVITIGIVGFMLDRIM 351 >gi|152996830|ref|YP_001341665.1| binding-protein-dependent transporter inner membrane component [Marinomonas sp. MWYL1] gi|150837754|gb|ABR71730.1| binding-protein-dependent transport systems inner membrane component [Marinomonas sp. MWYL1] Length = 323 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 13/163 (7%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWLS 453 +AS+I IP+GI IG + S + P Q+ + PLV V SY +P S Sbjct: 126 LASLIAIPLGILIGLNRSVYSALNPVIQVFKPVSPLAWLPLVTMVVSASYVSDDPMFSKS 185 Query: 454 LLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L T W L N G +A D V+ + I++P P T Sbjct: 186 FLTSMFTVTLCCMWPTLINTAVGVAAVEKDLLNVSKVLQLGWMTHVMKIVIPSAIPLMFT 245 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 G + G AW I +E+ + + GLG ++ + + GS Sbjct: 246 GLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 282 >gi|104774103|ref|YP_619083.1| glycine betaine ABC transporter, substrate binding / permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514172|ref|YP_813078.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423184|emb|CAI97982.1| Glycine betaine ABC transporter, substrate binding / permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093487|gb|ABJ58640.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125864|gb|ADY85194.1| glycine betaine/carnitine/choline ABC transporter, substrate binding and permease protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 506 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 25/154 (16%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 L A S+R G V+ I I+Q+IP L L + + + + P A+ A+ + Sbjct: 43 LLAHSKRAGEVVFQITSIIQTIPSLALLGLLIPFVGIGMTP---------ALIALTAYGI 93 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + Y +L NI +LEE + +F LS W+K L P ++P M++SG V Sbjct: 94 MPIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPMALP-------MTLSG----V 142 Query: 208 VASEMIVVGD----TVIPLPGIGSYIALAIKEQD 237 S ++++G +I G+G+YI + I++ + Sbjct: 143 SISLVMIIGTATLAAMIGAGGLGTYIMIGIQQNN 176 >gi|94311790|ref|YP_585000.1| binding-protein-dependent transport systems inner membrane component [Cupriavidus metallidurans CH34] gi|93355642|gb|ABF09731.1| taurine ABC-type transporter, permease component: TauT family [Cupriavidus metallidurans CH34] Length = 291 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 12/184 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV ++A+++ +P+GI++G + +PF PA+ F PL++ Sbjct: 99 MTVWRVVGGFVLAALLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIG 158 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+IF G+ + I+ V D E A + T R +++PG Sbjct: 159 ETQ-----KLLVIFIGSFFQIVLMVAVTVGGARKDLVEAAYTLGATPRGIVRRVLIPGAA 213 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 214 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 267 Query: 564 CFVL 567 C L Sbjct: 268 CIGL 271 >gi|323972218|gb|EGB67428.1| inner membrane transport system [Escherichia coli TA007] Length = 204 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 12 SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 71 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N + L L IF + + +AG + A S + + ++ILPG P Sbjct: 72 -NSKILLIYLAIFAP---VAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVILPGALPE 127 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 128 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 164 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 12/148 (8%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +R L +L+A+VI + S + +L PI+++ + +P L +L V++F Sbjct: 14 TRIVLALLAAVVIGIPVGIAMGL----SPTVRGILDPIIELYRPVPPLAYLPLMVIWFG- 68 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 IG E + I I+ + + S + ++ + +RS S Q W++ + Sbjct: 69 ------IG-ENSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVIL 121 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213 P ++P ++ + + + GW +VA+E+I Sbjct: 122 PGALPEILTGLRIGLGVGWSTLVAAELI 149 >gi|91789128|ref|YP_550080.1| nitrate transport permease [Polaromonas sp. JS666] gi|91698353|gb|ABE45182.1| nitrate transport permease [Polaromonas sp. JS666] Length = 328 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+I+ IPVG IG +S P LL + P + + + Sbjct: 137 SLKRVAMGFGMAAIVGIPVGFMIGRFDFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 194 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 195 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVSKILFPAVLPY 252 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 253 MLTGVRLAVGTAWLVIVAAEMLTGG 277 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 171 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 222 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 223 PQDYMNVARVLNLSEWKIVSKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 277 >gi|260596732|ref|YP_003209303.1| taurine transport system permease tauC [Cronobacter turicensis z3032] gi|260215909|emb|CBA28473.1| Taurine transport system permease protein tauC [Cronobacter turicensis z3032] Length = 230 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 21/186 (11%) Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IPVGI +G P + + + P +L P + PL+V + + L L IF Sbjct: 52 IGIPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGIGETS-KVLLIYLAIFA 110 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + +AG + A S + W+ Y+ILPG P +TG G W+ Sbjct: 111 P---VAMSALAGVKSAQQVRIRAAQSLGASRWQLLWYVILPGALPEILTGLRIGLGVGWS 167 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCFVL-----ALNR 571 + +E+ + T GLG ++ +S + +VVL V+ + F+L AL R Sbjct: 168 TLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVIALVAFILELGLRALTR 220 Query: 572 FL--WH 575 L WH Sbjct: 221 RLTPWH 226 Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P++++ + IP L +L V++F IG E + + I+ + + S + Sbjct: 69 ILDPLIELYRPIPPLAYLPLMVIWFG-------IG-ETSKVLLIYLAIFAPVAMSALAGV 120 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + ++S S WQ WY+ +P ++P ++ + + + GW +VA+E+I Sbjct: 121 KSAQQVRIRAAQSLGASRWQLLWYVILPGALPEILTGLRIGLGVGWSTLVAAELI 175 >gi|227512913|ref|ZP_03942962.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227523041|ref|ZP_03953090.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227083913|gb|EEI19225.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227089859|gb|EEI25171.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 283 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 27/199 (13%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS+ + +++ PILD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG + + IFA+ T ++ N+ + +P DL E + S+ + WQK + Sbjct: 154 GMVPGVI----ASVIFAMPPTIRMTNL------GIRQVPEDLIEAADSYGSTSWQKLVKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 +P + M G+ +MM+S+S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPLAKSTLMAGVNQSMMLSLS----------MVVIA-SMIGAMGLGNKVYFAVGRNDAG 252 Query: 240 AILYAMLTMLGVIFLYDQL 258 + A L ++ + + D++ Sbjct: 253 SGFAAGLAIVILAIILDRI 271 >gi|296101489|ref|YP_003611635.1| sulfonate/nitrate/taurine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055948|gb|ADF60686.1| sulfonate/nitrate/taurine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 275 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R++V ++ A II IPVGI +G P + + P +L P + PL+V Sbjct: 83 SLARILVALLAAVIIGIPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRTQVLLFVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252 Query: 566 VLALN 570 L Sbjct: 253 AFGLE 257 >gi|240141231|ref|YP_002965711.1| putative aliphatic sulfonates transport permease protein ssuC [Methylobacterium extorquens AM1] gi|240011208|gb|ACS42434.1| Putative aliphatic sulfonates transport permease protein ssuC [Methylobacterium extorquens AM1] Length = 250 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 I+ +++ IP L ++ F +++F + P AA+F I W + F+ ++ ++ Sbjct: 96 IVRLLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAIGVFWIVFFATQGAVRHVD 147 Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 RDL EV+++F G + + +P + PG++ + ++ W VVA+E+ V Sbjct: 148 RDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 201 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 PGIG+ + A ++ MLTM G+ L+D Sbjct: 202 -PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFD 235 >gi|331014291|gb|EGH94347.1| ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 282 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS +I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ KV+ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + S ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAATK------GL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270 G ++ + +L A++ + + L D LL R + W + F Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLERRFLAWRDTF 275 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + AW + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|257468378|ref|ZP_05632472.1| binding-protein-dependent transport systems inner membrane component [Fusobacterium ulcerans ATCC 49185] gi|317062651|ref|ZP_07927136.1| ABC transporter permease [Fusobacterium ulcerans ATCC 49185] gi|313688327|gb|EFS25162.1| ABC transporter permease [Fusobacterium ulcerans ATCC 49185] Length = 287 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 27/207 (13%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+A+ ISLL F L + + R+ + PILD MQ++P+ +L V++F V Sbjct: 103 VLAAVFISLLLGFPIGILISGNERINSFVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAV 162 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 I + AI + + + +++ E +R+F + +Q W + +P ++P Sbjct: 163 IATTIYAIVPVIRLT--------SHGIRQVDKEVVEAARAFGSTKFQALWKVQIPQALPT 214 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 G+ +MM+M+ +VV ++I G+G + + + ++ L A Sbjct: 215 IMTGVNQTLMMAMA-----------MVVTCSMIGASGLGMEVLIGVNRIEIGRGLVAGTA 263 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLER 274 ++ V L D R W N+ +++ Sbjct: 264 VVIVAILMD----RITQAWINRSEVKK 286 >gi|319763463|ref|YP_004127400.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gi|330824290|ref|YP_004387593.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317118024|gb|ADV00513.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gi|329309662|gb|AEB84077.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 279 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 21/203 (10%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ ++A+++ +P+GI +G + + ++PF PA+ F PL++ Sbjct: 88 MTVWRVLGGFVMAAVVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGLG 147 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L LL+IF G+ + I+ V D E A + + R +++PG Sbjct: 148 ELQ-----KLLVIFIGSVFQIILMVAVTVGNARKDLVEAAYTLGASSSGIVRRVLIPGAA 202 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ +G+G I +S + +++ G++++ Sbjct: 203 PDIAETLRLVLGWAWTYVIVAELIG------SASGIGHMITDSQALLNTGQIIFGIIVIG 256 Query: 564 CFVL-------ALNR--FLWHPL 577 L A+NR F W L Sbjct: 257 LIGLVSDVLFKAVNRRLFAWSAL 279 >gi|15888234|ref|NP_353915.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15155886|gb|AAK86700.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 302 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 16/170 (9%) Query: 68 TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL +++ A +I+++ L +S RL ++ P+LD+MQ++P +L VV F Sbjct: 109 TTLSIVTIATLIAIVIGLPLGILMGRSERLQRLINPVLDVMQTLPSFVYLIPVVVIF--- 165 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV G I+AI V +T S+ L + R++ E + +F S QK + + +P Sbjct: 166 GIGKVPGLIAVVIYAI--PPVIRLT-SLGIRLVD--REVLEAADAFGSSNGQKLFNVQLP 220 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++P ++ + ++ VV + M+ VG G+G + AI Q Sbjct: 221 LALPTIMTGINQTIMMALAMVVVASMVGVG-------GLGKNVLQAINNQ 263 >gi|283784926|ref|YP_003364791.1| ABC transporter permease [Citrobacter rodentium ICC168] gi|282948380|emb|CBG87966.1| ABC transporter, permease component [Citrobacter rodentium ICC168] Length = 522 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 24/187 (12%) Query: 71 RMLSAMVISLLFTFVYATLAAKSR-----------RLGMVLVPILDIMQSIPILGFLTFT 119 + +AM+ SL FV L S R G + P L++++ I + +L Sbjct: 320 ELTAAMLASLGRAFVGGALGIASGLLCGLILALRPRAGKIFTPTLNVLRHIALFAWLPLL 379 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + N GK++ LA+ F +F FS Q++ L+EV+R RL + Sbjct: 380 TAWVGNDNGGKIVFIALASFFPMF--------FSTLQAVRQRNPQLDEVARVLRLGALTR 431 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 L +P + PG+ + +++ W + +E + PGIGS + A + D+ Sbjct: 432 LRSLILPGAAPGIFAGLRLALIYAWLGNIGAEYFMSSG-----PGIGSLMINAQQLLDMP 486 Query: 240 AILYAML 246 IL M+ Sbjct: 487 TILCGMV 493 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ + IP LG++ +V F G G +LA I + V +T + Q++ ++ Sbjct: 106 PLFYALAQIPTLGWIPLFMVLF-----GIDNGLKLAVII---KTTVVPLTINTQQAVTSV 157 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 P L E + S WQ+ +L +P S+PG + +++S W ++ E++ + + Sbjct: 158 PLMLSEAGKVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSEGI 215 >gi|170760783|ref|YP_001786759.1| putative ABC transporter, permease protein [Clostridium botulinum A3 str. Loch Maree] gi|169407772|gb|ACA56183.1| putative ABC transporter, permease protein [Clostridium botulinum A3 str. Loch Maree] Length = 253 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 5/164 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV+ I+I+ ++ I +GI G + ++P + A P V ++++ V + Sbjct: 68 SIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATP--VMSIIIIALVWFKS 125 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ S+LM F I NV++G + E+A+ + + I LP PY Sbjct: 126 SSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPY 182 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 ++G + G W S+ SEV S + L A +TE+ Sbjct: 183 IISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEE 226 >gi|293395630|ref|ZP_06639913.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291421949|gb|EFE95195.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 299 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 138 LAQMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASTWTIFICSIWPMILNTA 189 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ Sbjct: 190 EGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPFVLTGVRLSIGIAWLVIVAAEMLTG 249 Query: 216 G 216 G Sbjct: 250 G 250 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 6/151 (3%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A+++ IP G +G ++ + P LL + P + Sbjct: 105 WNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLAQMLNPIISLLRPVSPLAWLP--IGL 162 Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + P S IF + W ++ N G + P D+ VA ++ W R I+ Sbjct: 163 LLFQRAEPA---STWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILF 219 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWG 530 P + P+ +TG + G AW + +E+ + G Sbjct: 220 PAVLPFVLTGVRLSIGIAWLVIVAAEMLTGG 250 >gi|148254013|ref|YP_001238598.1| putative taurine ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146406186|gb|ABQ34692.1| Putative taurine ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 282 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 12/149 (8%) Query: 69 TLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 TL L+ +V +LL V TL A S R ++ P+L+ + IP L +L +++F Sbjct: 88 TLASLARIVAALLAAIVVGTLTGLAIALSPRARGIIEPLLEFYRPIPPLAYLPLVIIWFG 147 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 IG E A + I+ + ++ + L ++ D +RS S WQ + Sbjct: 148 -------IG-EFAKVLVIYLGILPSIVIATVDGLRSVAPDRVNAARSLGASRWQVIGLVL 199 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 +P ++P ++ + + + GW +VA+E++ Sbjct: 200 LPHALPSILTGIRIGLGTGWATLVAAELV 228 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V ++ A ++ G+ I P I+P + P + PLV + ++ Sbjct: 91 SLARIVAALLAAIVVGTLTGLAIALSPRARGIIEPLLEFYRPIPPLAYLPLV---IIWFG 147 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L++ G I+ + G + D A S + W+ ++LP P Sbjct: 148 IG-EFAKVLVIYLGILPSIVIATVDGLRSVAPDRVNAARSLGASRWQVIGLVLLPHALPS 206 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W + +E+ + T GLG I +++ VVLG+L++ Sbjct: 207 ILTGIRIGLGTGWATLVAAELVA------ATRGLGFMIKGASDFLVTDVVVLGILVIAVI 260 Query: 566 VLALN 570 AL Sbjct: 261 AFALE 265 >gi|120610821|ref|YP_970499.1| nitrate ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120589285|gb|ABM32725.1| nitrate ABC transporter, inner membrane subunit [Acidovorax citrulli AAC00-1] Length = 315 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP G IG +S P LL + P + + + Sbjct: 124 SLERVAVGFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 181 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 182 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPSVLPY 239 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 240 MLTGVRLAVGTAWLVIVAAEMLTGG 264 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 158 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 209 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 210 PQDYMNVARVLNLSEWKIATTILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 264 >gi|260549387|ref|ZP_05823606.1| LOW QUALITY PROTEIN: ABC-type nitrate/sulfonate/bicarbonate transport system [Acinetobacter sp. RUH2624] gi|260407496|gb|EEX00970.1| LOW QUALITY PROTEIN: ABC-type nitrate/sulfonate/bicarbonate transport system [Acinetobacter sp. RUH2624] Length = 253 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L +I ++A S+ L P ++SIP L ++ +++ Sbjct: 60 STWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLLLWLGIDE 119 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+ + A F +T+ V ++ N+ + L EV + +RL+ +Q+ + +P Sbjct: 120 GSKITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRVLSIILPA 171 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + PG++ + S++ W F++A+E+I Sbjct: 172 ASPGILTGLRNSLNLSWMFMIAAELIAA 199 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 25/179 (13%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +RV+ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 59 ISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL------ 112 Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LWL + L+ G + N +A EV + + ++ I Sbjct: 113 -----LWLGIDEGSKITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRVLSI 167 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ILP P +TG + +W I +E+ + T G+G +++ E S P++V Sbjct: 168 ILPAASPGILTGLRNSLNLSWMFMIAAELIA------ATQGIGYLLSDGRET-SRPDIV 219 >gi|330990546|ref|ZP_08314504.1| Nitrate transport permease protein nrtB [Gluconacetobacter sp. SXCC-1] gi|329762449|gb|EGG78935.1| Nitrate transport permease protein nrtB [Gluconacetobacter sp. SXCC-1] Length = 286 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 12/183 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A ++ +P+G IG RP I + PF Q+L + PL Sbjct: 93 WQVGASLLRVAIGYGLAVVVAVPLGFLIGLRPVIRRAVDPFIQILRPISPLAWMPL---- 148 Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + Y + + +IF + W I+ N G + ++ VA + + R +++L Sbjct: 149 -ALYTIRNAEGCGIFVIFICSLWPIVLNTAFGVGSVRREWLNVARTLEVGWARRVLFVLL 207 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P +TG G AW A + +E + + ++G+G ++ S V+L V Sbjct: 208 PAAAPTIITGMRIGLGIAWLAIVAAE------MLVGSSGIGYFVWNQWNNLSLSNVLLAV 261 Query: 560 LIM 562 L++ Sbjct: 262 LLI 264 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + I++ I L ++ + N AE IF IF +W + + + ++ Sbjct: 132 PFIQILRPISPLAWMPLALYTIRN--------AEGCGIFVIFICSLWPIVLNTAFGVGSV 183 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 R+ V+R+ + ++ ++ +P + P ++ M + + W +VA+EM+V Sbjct: 184 RREWLNVARTLEVGWARRVLFVLLPAAAPTIITGMRIGLGIAWLAIVAAEMLV 236 >gi|289627199|ref|ZP_06460153.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648668|ref|ZP_06480011.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868036|gb|EGH02745.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 283 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ S + LR+LS VI V+A SR L P ++SIP L ++ +++ Sbjct: 79 KHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLW 138 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 K++ + A F ++ + V ++ I R L EV + + S ++ Sbjct: 139 LGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKLVEVGKMYGFSRYRLTRR 190 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++PGL + MS W F+VA+E+I G+G ++ + +L Sbjct: 191 ILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GLGYLLSDGRETSRPDIVL 244 Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 A++ + + L D LL + + W + F + G Sbjct: 245 AAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 282 Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGKMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + +W + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|326317800|ref|YP_004235472.1| nitrate ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374636|gb|ADX46905.1| nitrate ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 315 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP G IG +S P LL + P + + + Sbjct: 124 SLERVAVGFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 181 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 182 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPSVLPY 239 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 240 MLTGVRLAVGTAWLVIVAAEMLTGG 264 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 158 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 209 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 210 PQDYMNVARVLNLSEWKIATTILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 264 >gi|270264393|ref|ZP_06192659.1| transporter [Serratia odorifera 4Rx13] gi|270041529|gb|EFA14627.1| transporter [Serratia odorifera 4Rx13] Length = 278 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 21/202 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R++V ++ A II +PVGI +G + + P ++ P + PL+V Sbjct: 84 AASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGI 143 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A + W+ R+++LP Sbjct: 144 GETS-KILLIYLAIFAP---VALSAVAGVRSVAQVRVRAARALGANRWQVLRFVVLPSAL 199 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVL 560 P +TG G W+ + +E+ + T GLG ++ +S + +VVL GV+ Sbjct: 200 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIGVI 252 Query: 561 IMCCFVL-----ALNRFL--WH 575 + F L AL R L WH Sbjct: 253 AIIAFGLELGLRALQRRLTPWH 274 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 25/115 (21%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P+++I + +P L +L V++F IG E + I I+ + + S + Sbjct: 117 ILDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVALSAVAGV 168 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ + WQ ++ +P ++P ++ + + + GW +VA+E+I Sbjct: 169 RSVAQVRVRAARALGANRWQVLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 223 >gi|218532725|ref|YP_002423541.1| ABC transporter inner membrane protein [Methylobacterium chloromethanicum CM4] gi|254563743|ref|YP_003070838.1| aliphatic sulfonates transport permease ssuC [Methylobacterium extorquens DM4] gi|218525028|gb|ACK85613.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] gi|254271021|emb|CAX27028.1| Putative aliphatic sulfonates transport permease protein ssuC [Methylobacterium extorquens DM4] Length = 250 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 I+ +++ IP L ++ F +++F + P AA+F I W + F+ ++ ++ Sbjct: 96 IVRLLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAIGVFWIVFFATQGAVRHVD 147 Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 RDL EV+++F G + + +P + PG++ + ++ W VVA+E+ V Sbjct: 148 RDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 201 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 PGIG+ + A ++ MLTM G+ L+D Sbjct: 202 -PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFD 235 >gi|116749077|ref|YP_845764.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] gi|116698141|gb|ABK17329.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] Length = 231 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 87/174 (50%), Gaps = 14/174 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ ++ I L ++ F +++F IG + A+F IF + + M S ++ +I Sbjct: 72 PVIQFLRPISPLAWIPFAMLWFG-------IGDK-PALFIIFIASFFPMLISTVKAAASI 123 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +V+ + + S W+ +Y+ +P +PG+V + +++ W VVA+EMI V Sbjct: 124 HPMYFQVAANLQFSVWESVYYVILPACLPGIVLALRVTLGVSWMVVVAAEMIAVKS---- 179 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275 G+G I A L ++ AM+T+ + L D + + + + ++RLE+ Sbjct: 180 --GLGYLIIDARNALRLDYVVVAMITIGVIGLLLDYFMTKLEGMEAVRWRLEQK 231 >gi|121595153|ref|YP_987049.1| nitrate ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|120607233|gb|ABM42973.1| nitrate ABC transporter, inner membrane subunit [Acidovorax sp. JS42] Length = 313 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 14/160 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 156 PVISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 207 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 208 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV---- 263 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GIG ++ ++ IL A+ + GV L + L R Sbjct: 264 --GIGFWVWDEWNNLNVTNILVAIFVIGGVGLLLEWALVR 301 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP G IG +S P LL + P + + + Sbjct: 122 SLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLP--IGLLVFKG 179 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 180 ANPAAIWTIFIC--SIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLPY 237 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 238 MLTGVRLAVGTAWLVIVAAEMLTGG 262 >gi|86136960|ref|ZP_01055538.1| putative nitrate transporter [Roseobacter sp. MED193] gi|85826284|gb|EAQ46481.1| putative nitrate transporter [Roseobacter sp. MED193] Length = 357 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 21/216 (9%) Query: 368 VNHFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 V H TY IW T+F +I S+I IP+GI G P ++ I P Q+ Sbjct: 135 VRHRTYTGKPTYYQQIWTSIKTVF---FGFLIGSVIAIPLGIMAGLSPTANAAINPIIQI 191 Query: 425 LAAFPANVFFPLVVSCVSY-YHLNPNLWLSLLMIFG------TQWYILFNVIAGASAFPN 477 + P+V VS Y N L+ ++ + W L N G ++ Sbjct: 192 FKPVSPLAWLPIVTMVVSAVYATNDGLFSKSFLVSAITVTLCSLWPTLINTALGVASIDK 251 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 D V+ ++ + ++LP P TG + G W I +E+ + + Sbjct: 252 DLISVSKVLKMSTYSKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNP 305 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GLG ++ + + GS L +++ F + + FL Sbjct: 306 GLGKFVWDEFQNGSSQS--LAKIMVAVFTIGIIGFL 339 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL VS+ ++S + K L +P ++P + + +S+ GW Sbjct: 235 LWPTLINTALGVASIDKDLISVSKVLKMSTYSKITKLVLPSALPLIFTGLRLSLGVGWMV 294 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + Q L I+ A+ T+ + FL D+++F Sbjct: 295 LIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIMVAVFTIGIIGFLLDRIMF 345 >gi|330503532|ref|YP_004380401.1| nitrate ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328917818|gb|AEB58649.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 264 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP+G IG ++ + P LL + P + + + Sbjct: 76 SLGRVGVGFGLAALVGIPLGFAIGRFAFLAGMLAPIISLLRPVSPLAWLP--IGLLVFEA 133 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P S+ +IF + W I+ N AG ++ P D+ VA ++ + I+ P + P Sbjct: 134 AGPA---SIWVIFISSIWPIILNTAAGVASVPQDYLNVARVLKLSECKVLTRILFPAVLP 190 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + +TG A G AW + +E+ + G GLG ++ + + +++ ++I+ Sbjct: 191 HLMTGIRLAIGVAWLVIVAAEMLTGG------IGLGFWVWDEWNNLNVEHILIAIIIVGL 244 Query: 565 FVLALNRFL 573 LAL + L Sbjct: 245 VGLALEQML 253 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F P A+I+ IF S +W + + Sbjct: 104 LAGMLAPIISLLRPVSPLAWLPIGLLVFEAAGP--------ASIWVIFISSIWPIILNTA 155 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + ++P+D V+R +LS + + P +P L+ + +++ W +VA+EM+ Sbjct: 156 AGVASVPQDYLNVARVLKLSECKVLTRILFPAVLPHLMTGIRLAIGVAWLVIVAAEMLTG 215 Query: 216 G 216 G Sbjct: 216 G 216 >gi|188583848|ref|YP_001927293.1| nitrate ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179347346|gb|ACB82758.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium populi BJ001] Length = 279 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A ++ IPVG IG P +S + P+ Q+L + PL + + Sbjct: 91 SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N + G + ++ VA + + R +ILP P Sbjct: 151 LS-----AIFVIFICSVWPMLINTVFGVAGTRKEWLNVARTLEVGPVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V+ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGL 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMVLDQLL 268 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+AIF IF VW M + + ++ V+R+ + ++ + + +P + P ++ Sbjct: 149 SSLSAIFVIFICSVWPMLINTVFGVAGTRKEWLNVARTLEVGPVRRAFTVILPAAAPTIL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ + ++ ++L + V Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGM 262 Query: 254 LYDQLLFR 261 + DQLL R Sbjct: 263 VLDQLLAR 270 >gi|53714621|ref|YP_100613.1| glycine betaine/L-proline transport system permease [Bacteroides fragilis YCH46] gi|253565126|ref|ZP_04842582.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_2_5] gi|265765915|ref|ZP_06093956.1| choline ABC transporter, permease [Bacteroides sp. 2_1_16] gi|52217486|dbj|BAD50079.1| glycine betaine/L-proline transport system permease [Bacteroides fragilis YCH46] gi|251946591|gb|EES86968.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_2_5] gi|263253583|gb|EEZ25048.1| choline ABC transporter, permease [Bacteroides sp. 2_1_16] gi|301164117|emb|CBW23673.1| putative glycine betaine transport system permease protein [Bacteroides fragilis 638R] Length = 274 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 18/160 (11%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ ++L+ A S R V+ PILD+MQ++P +L V++ Sbjct: 83 EATMQTLALVLSSTCLALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLF 142 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG +FA + + + +P+++ E SRSF + WQ + Sbjct: 143 FGLGVVPG---------VFATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLY 193 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +P ++P G+ +MMS+S VV + MI G Sbjct: 194 KVQLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 13/158 (8%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AW G V FT +L + +G T+ V+ +A I+ +P+G+W Sbjct: 56 LAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLALIVGVPIGVWTANSNR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAG 471 I P L+ PA V+ + V ++ L P ++ ++ IF I + G Sbjct: 116 AEKVIHPILDLMQTMPAFVYL---IPAVLFFGLGVVPGVFATI--IFAMPPVIRLTGL-G 169 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 170 IRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|329848543|ref|ZP_08263571.1| nitrate ABC transporter, permease protein [Asticcacaulis biprosthecum C19] gi|328843606|gb|EGF93175.1| nitrate ABC transporter, permease protein [Asticcacaulis biprosthecum C19] Length = 299 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 8/117 (6%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+ +++++P L +L ++ P +A+F IF + +W + + + Sbjct: 140 LDPMFQVLRTVPPLAWLPISLAMLREAQP--------SALFVIFITSIWPIVINTAVGVR 191 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 NIP D VSR RL + F+ + +P + P + + + + W +VASEM++ G Sbjct: 192 NIPVDYINVSRVLRLHPIEFFFKIMLPAATPHIFTGLRIGVGMSWLAIVASEMLLGG 248 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 6/147 (4%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + IA+++ + G +IG + P Q+L P + P +S Sbjct: 103 WHIMTSLSRVGIGFSIAAVVGVLAGAFIGTVGWARKGLDPMFQVLRTVPPLAWLP--ISL 160 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 P+ +L +IF T W I+ N G P D+ V+ + ++ I+L Sbjct: 161 AMLREAQPS---ALFVIFITSIWPIVINTAVGVRNIPVDYINVSRVLRLHPIEFFFKIML 217 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEV 526 P P+ TG G +W A + SE+ Sbjct: 218 PAATPHIFTGLRIGVGMSWLAIVASEM 244 >gi|154490975|ref|ZP_02030916.1| hypothetical protein PARMER_00892 [Parabacteroides merdae ATCC 43184] gi|154088723|gb|EDN87767.1| hypothetical protein PARMER_00892 [Parabacteroides merdae ATCC 43184] Length = 271 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ +I+LLF ++ + V+ P+LD+MQ++P +L V++F Sbjct: 87 QTVALVLSSTIIALLFGVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P D+ E +RSF + Q + + +P Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPEDIVEATRSFGATSGQLLFKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 ++P G+ +MM++S VV + MI G Sbjct: 199 LALPTIMAGVNQTIMMALS----MVVIAAMISAG 228 >gi|170740515|ref|YP_001769170.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168194789|gb|ACA16736.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 257 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 13/194 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ ++AS + +P+GI +G + + ++PF PA+ F PL++ Sbjct: 66 MTVWRVLGGFLLASAVAVPLGILMGAYKPVEAFLEPFVSFARYLPASAFVPLLILWAGIG 125 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+IF G+ + I+ V A D E A + R +++P Sbjct: 126 EMQ-----KLLVIFIGSVFQIVLMVAVAVGAVRRDLVEAAYTLGAGDSGIIRRVLIPATA 180 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I ES + +++ G++++ Sbjct: 181 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMIIESQALLATGQIIFGIIVIG 234 Query: 564 CFVLALNRFLWHPL 577 LA + FL+ L Sbjct: 235 LIGLA-SDFLFKAL 247 >gi|325916164|ref|ZP_08178448.1| periplasmic glycine betaine/choline-binding lipoprotein [Xanthomonas vesicatoria ATCC 35937] gi|325537584|gb|EGD09296.1| periplasmic glycine betaine/choline-binding lipoprotein [Xanthomonas vesicatoria ATCC 35937] Length = 490 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 8/122 (6%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++LL LAA+ RLG V++ + ++Q++P L F + F IGA+ Sbjct: 306 LALLIALPLGVLAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-P 357 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AI A+F + + + + L +IPR+L + + + L W + W + +P + +V + Sbjct: 358 AIAALFLYSLLPIVRNTHAGLTSIPRELRQTAEAIGLPAWTRLWRVELPLARRTIVAGIQ 417 Query: 198 MS 199 + Sbjct: 418 TA 419 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 39/274 (14%) Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ-----RVSYMLDIFWFCVVCGVAIGI 359 + L+ + +TL ++ E +Q + Q + + W V A Sbjct: 225 YRKDLAQRAPAMLKTLQGLQGRIDEATMQRLNAQVKLQRQSEAAVAAQWLGVA---ATAH 281 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 A IG ++ H L I LG +A +I +P+G+ RP + + Sbjct: 282 ADSRIGRLLGHTREHLALVGISLG------------LALLIALPLGVLAARRPRLGQVVL 329 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 +L P+ F V + + + ++ L ++ + I+ N AG ++ P + Sbjct: 330 SLTGVLQTLPSLAVF---VFMIPLFGIGAKPAIAALFLY-SLLPIVRNTHAGLTSIPREL 385 Query: 480 KEVASSFHITGW-RWWRYIILPGIFPYYVTGAITAC----GGAWNASIVSEVASWGH--- 531 ++ A + + W R WR + LP V G TA G A +++ +G Sbjct: 386 RQTAEAIGLPAWTRLWR-VELPLARRTIVAGIQTAAVINVGTATLGALIG-AGGYGQPIL 443 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +R +G + +G+ P VL +L+ F Sbjct: 444 TGIRLDDIGLIL-----EGAIPAAVLALLVQAAF 472 >gi|107028845|ref|YP_625940.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116689996|ref|YP_835619.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|105898009|gb|ABF80967.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116648085|gb|ABK08726.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 291 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + A++ I +G+ IG + + P ++L PA + PL + Sbjct: 96 SITRVLAGFVAAAVTGIGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAI------L 149 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ LS++ I G + IL N + GA A A S G + +ILPG Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAA 209 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P TG G AW + +E+ + + G+G + ES ++P++V+G+ ++ Sbjct: 210 PSIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALI 262 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 33/171 (19%), Positives = 71/171 (41%), Gaps = 8/171 (4%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P D+ + L LP + + R+L+ V + + + R L L+P Sbjct: 72 APSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVTGIGLGLAIGRYRALEDTLLPP 131 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L++++ IP + ++ ++ F + +EL+ +F F ++ + + + Sbjct: 132 LEMLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 L +RS G + + +P + P + + + M WF +V +EMI Sbjct: 184 RLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIA 234 >gi|255010825|ref|ZP_05282951.1| glycine betaine/L-proline transport system permease [Bacteroides fragilis 3_1_12] gi|313148627|ref|ZP_07810820.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137394|gb|EFR54754.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 274 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 18/160 (11%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ ++L+ A S R V+ PILD+MQ++P +L V++ Sbjct: 83 EATMQTLALVLSSTCLALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLF 142 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG +FA + + + +P+++ E SRSF + WQ + Sbjct: 143 FGLGVVPG---------VFATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLY 193 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +P ++P G+ +MMS+S VV + MI G Sbjct: 194 KVQLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 13/158 (8%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AW G V FT +L + +G T+ V+ +A I+ +P+G+W Sbjct: 56 LAWMKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLALIVGVPIGVWTANSNR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAG 471 I P L+ PA V+ + V ++ L P ++ ++ IF I + G Sbjct: 116 AEKVIHPILDLMQTMPAFVYL---IPAVLFFGLGVVPGVFATI--IFAMPPVIRLTGL-G 169 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 170 IRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|320324033|gb|EFW80116.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329022|gb|EFW85021.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 283 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS VI V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + S ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 G ++ + +L A++ + + L D LL + + W + F + G Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 282 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + +W + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|332286228|ref|YP_004418139.1| ABC transporter permease protein [Pusillimonas sp. T7-7] gi|330430181|gb|AEC21515.1| ABC transporter permease protein [Pusillimonas sp. T7-7] Length = 257 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 85/177 (48%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + ++A+ + IP+G IG P +++ P LL P + L + + + Sbjct: 68 SLSRVAIGFLLAAFVGIPIGFLIGRVPVVNAICSPVINLLR--PISPLAWLPLGLLLFKA 125 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +P ++ + + W ++ N G P D+ VA +++ + + I+LP + PY Sbjct: 126 SDPAAIWAIFIC--SIWPMIINTADGVKRVPQDYLNVARVLNLSERKIFTRILLPSVLPY 183 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +TG + G AW + +E+ + G TGLG ++ + + +++ VL++ Sbjct: 184 MMTGVRLSIGTAWLVIVAAEMLTGG------TGLGFWLWDEWNNLNVQNILIAVLVI 234 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 45/83 (54%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ AAI+AIF +W M + + +P+D V+R LS + F + +P +P ++ Sbjct: 126 SDPAAIWAIFICSIWPMIINTADGVKRVPQDYLNVARVLNLSERKIFTRILLPSVLPYMM 185 Query: 194 WNMMMSMSGGWFFVVASEMIVVG 216 + +S+ W +VA+EM+ G Sbjct: 186 TGVRLSIGTAWLVIVAAEMLTGG 208 >gi|71733936|ref|YP_274863.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554489|gb|AAZ33700.1| ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 268 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS VI V+A SR L P Sbjct: 55 RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 106 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 107 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 158 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + S ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 159 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 212 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 G ++ + +L A++ + + L D LL + + W + F + G Sbjct: 213 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 267 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 69 SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 121 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 122 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 177 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + +W + +E+ + T GLG +++ E S P++VL Sbjct: 178 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 230 Query: 559 VLIMCC 564 +I+ Sbjct: 231 AIIVLA 236 >gi|301629375|ref|XP_002943818.1| PREDICTED: probable ABC transporter permease protein BruAb2_1124-like [Xenopus (Silurana) tropicalis] Length = 274 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 15/177 (8%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 FT D L+ I +T++RVV ++A+ I +P+GI +G + + ++PF PA Sbjct: 71 FTEFDFLHDI---GMTVWRVVGGFVLAASIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPA 127 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + F PL++ L LL+IF G+ + I+ V D E A + T Sbjct: 128 SAFIPLLILWAGLGELQ-----KLLVIFIGSVFQIILMVAVIVGNARKDLVEAAYTLGAT 182 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 R +++PG P G AW IV+E+ ++G+G I +S Sbjct: 183 HGGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 233 >gi|300870088|ref|YP_003784959.1| binding-protein-dependent transport systems inner membrane component [Brachyspira pilosicoli 95/1000] gi|300687787|gb|ADK30458.1| binding-protein-dependent transport systems inner membrane component [Brachyspira pilosicoli 95/1000] Length = 241 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 16/161 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126 T +R++ V+S L +A + + +L+PI++ +++IP + + V++F NL Sbjct: 58 TFIRVIVTFVLSFLLAITLGIIAGIFKSVRYILMPIINFIRTIPTIPLILIAVLWFNNNL 117 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P I L IF I V N + NI ++L E+S S+ +S + L +P Sbjct: 118 VP---IFVSLFVIFPIIYDAVVN-------GIINIDKNLIEMSNSYNVSFKNQLITLYIP 167 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 P ++ ++ SM W V+ASE+I +P G+G+ Sbjct: 168 SIKPYILTSISQSMGMTWKSVLASEII-----TLPTLGLGT 203 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 23/177 (12%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Y ++LY T RV+V +++ ++ I +GI G + + P + P Sbjct: 52 YSNLLY-------TFIRVIVTFVLSFLLAITLGIIAGIFKSVRYILMPIINFIRTIPT-- 102 Query: 433 FFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFN-VIAGASAFPNDFKEVASSFHIT 489 PL++ V +++ N P +++SL +IF I+++ V+ G + E+++S++++ Sbjct: 103 -IPLILIAVLWFNNNLVP-IFVSLFVIFP----IIYDAVVNGIINIDKNLIEMSNSYNVS 156 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + +P I PY +T + G W + + SE+ I L T GLG + ES Sbjct: 157 FKNQLITLYIPSIKPYILTSISQSMGMTWKSVLASEI-----ITLPTLGLGTKLYES 208 >gi|19745348|ref|NP_606484.1| glycine-betaine binding permease protein [Streptococcus pyogenes MGAS8232] gi|19747452|gb|AAL96983.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS8232] Length = 575 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AKS + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|310765617|gb|ADP10567.1| taurine transporter subunit [Erwinia sp. Ejp617] Length = 275 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A I +PVGI +G + + P +L P + PL+V Sbjct: 81 AASLTRIVIALLAAVAIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + W+ +++LPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRLRAARSLGASRWQVLWFVVLPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 197 PEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIA 250 Query: 564 CFVLALN 570 AL Sbjct: 251 LIAFALE 257 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R++ A++ ++ L + L +L P++++ + +P L +L V++ Sbjct: 78 QHLAASLTRIVIALLAAVAIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + + + +RS S WQ W+ Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRLRAARSLGASRWQVLWF 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 190 VVLPGALPEILTGVRIGLGVGWSTLVAAELI 220 >gi|222111494|ref|YP_002553758.1| nitrate ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|221730938|gb|ACM33758.1| nitrate ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 313 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 14/160 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 156 PVISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 207 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 208 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV---- 263 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GIG ++ ++ IL A+ + GV L + L R Sbjct: 264 --GIGFWVWDEWNNLNVTNILVAIFVIGGVGLLLEWALVR 301 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP G IG +S P LL + P + + + Sbjct: 122 SLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLP--IGLLVFKG 179 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 180 ANPAAIWTIFIC--SIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLPY 237 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 238 MLTGVRLAVGTAWLVIVAAEMLTGG 262 >gi|60682640|ref|YP_212784.1| putative glycine betaine transport system permease protein [Bacteroides fragilis NCTC 9343] gi|60494074|emb|CAH08866.1| putative glycine betaine transport system permease protein [Bacteroides fragilis NCTC 9343] Length = 274 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 18/160 (11%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ ++L+ A S R V+ PILD+MQ++P +L V++ Sbjct: 83 EATMQTLALVLSSTCLALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLF 142 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG +FA + + + +P+++ E SRSF + WQ + Sbjct: 143 FGLGVVPG---------VFATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLY 193 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +P ++P G+ +MMS+S VV + MI G Sbjct: 194 KVQLPLALPTILTGVNQTIMMSLS----MVVIAAMIAAGG 229 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 13/158 (8%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AW G V FT +L + +G T+ V+ +A I+ +P+G+W Sbjct: 56 LAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLALIVGVPIGVWTANSNR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAG 471 I P L+ PA V+ + V ++ L P ++ ++ IF I + G Sbjct: 116 AEKVIHPILDLMQTMPAFVYL---IPAVLFFGLGVVPGVFATI--IFAMPPVIRLTGL-G 169 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 170 IRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|257487776|ref|ZP_05641817.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330985354|gb|EGH83457.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008505|gb|EGH88561.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 283 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS VI V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + S ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRNGMSLSWMFLVAAELIAATK------GL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 G ++ + +L A++ + + L D LL + + W + F + G Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFTGQSREG 282 Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG +W + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRNGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|163853768|ref|YP_001641811.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|163665373|gb|ABY32740.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] Length = 250 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 I+ +++ IP L ++ F +++F + P AA+F I W + F+ ++ ++ Sbjct: 96 IVRMLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAIGVFWIVFFATQGAVRHVD 147 Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 RDL EV+++F G + + +P + PG++ + ++ W VVA+E+ V Sbjct: 148 RDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 201 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 PGIG+ + A ++ MLTM G+ L+D Sbjct: 202 -PGIGARMMQASSLLSTDIVVVYMLTMAGLYGLFD 235 >gi|88800578|ref|ZP_01116140.1| putative permease [Reinekea sp. MED297] gi|88776723|gb|EAR07936.1| putative permease [Reinekea sp. MED297] Length = 295 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 21/175 (12%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T++ LS + + L + V AKS R+ V+ PILD+MQ++P +L V Sbjct: 98 EDTMQTLSIITVCTLLSIVLGVPIGIAMAKSNRIQSVITPILDVMQTMPAFVYLIPVV-- 155 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + + +++ E + ++ ++ WQ+ W Sbjct: 156 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAADAYGVTPWQRLW 208 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P +MP ++ + ++ VV + MI V G+G + +I Q Sbjct: 209 NVQLPLAMPNIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLQSITNQ 256 >gi|146307132|ref|YP_001187597.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145575333|gb|ABP84865.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] Length = 283 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP+G IG ++ + P LL + P + + + Sbjct: 95 SLGRVGVGFGLAALVGIPLGFAIGRFAFLAGMLAPIISLLRPVSPLAWLP--IGLLVFEA 152 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P S+ +IF + W I+ N AG ++ P D+ VA ++ ++ I+ P + P Sbjct: 153 AGPA---SIWVIFISSIWPIILNTAAGVASVPQDYLNVARVLKLSEFKVLTRILFPAVLP 209 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + +TG A G AW + +E+ + G GLG ++ + + +++ ++I+ Sbjct: 210 HLMTGIRLAIGVAWLVIVAAEMLTGG------IGLGFWVWDEWNNLNVEHILIAIIIVGL 263 Query: 565 FVLALNRFL 573 LAL + L Sbjct: 264 VGLALEQTL 272 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F P A+I+ IF S +W + + Sbjct: 123 LAGMLAPIISLLRPVSPLAWLPIGLLVFEAAGP--------ASIWVIFISSIWPIILNTA 174 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + ++P+D V+R +LS ++ + P +P L+ + +++ W +VA+EM+ Sbjct: 175 AGVASVPQDYLNVARVLKLSEFKVLTRILFPAVLPHLMTGIRLAIGVAWLVIVAAEMLTG 234 Query: 216 G 216 G Sbjct: 235 G 235 >gi|330993876|ref|ZP_08317808.1| Putative aliphatic sulfonates transport permease protein ssuC [Gluconacetobacter sp. SXCC-1] gi|329759144|gb|EGG75656.1| Putative aliphatic sulfonates transport permease protein ssuC [Gluconacetobacter sp. SXCC-1] Length = 254 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 27/164 (16%) Query: 101 VPILD--------IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 VP+LD +++ IP L ++ F +++F G A F I S W + Sbjct: 90 VPLLDGLLSGVVRVLRPIPGLAWVPFAILWFGLNTAG--------ATFVIAISVFWINFY 141 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + Y ++ +I DL EV+ SF G W + + +P S PG++ + + W VVA+E Sbjct: 142 AAYGAVQSIDPDLYEVAASFGHGGFWARLRTVVIPASAPGVLAGLRTGLGQAWMSVVAAE 201 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + V PGIG+ + ++ LLA ++ ML + LY Sbjct: 202 LFGV-------PGIGARM---MQASSLLATDLVVVYMLTMALLY 235 >gi|224367278|ref|YP_002601441.1| ABC-type transporter, permease protein (membrane spanning protein) [Desulfobacterium autotrophicum HRM2] gi|223689994|gb|ACN13277.1| ABC-type transporter, permease protein (membrane spanning protein) [Desulfobacterium autotrophicum HRM2] Length = 258 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 6/110 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + N++ G + +++E++ + + RY++ PG FP ++TG W A + Sbjct: 136 VFLNLMGGLNTIEKEWQELSETLKFNHAEYIRYVLFPGAFPSFLTGIQLGLSYCWRALMG 195 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +E+ + +GLG I +S E G +V +G++ + + L+R L Sbjct: 196 AEMIA------AASGLGYLILDSQEMGRIDKVFVGIITLGICGIVLDRVL 239 >gi|157371148|ref|YP_001479137.1| nitrate ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322912|gb|ABV42009.1| nitrate ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 298 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 137 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASTWTIFICSIWPMILNTA 188 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ Sbjct: 189 EGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVIVAAEMLTG 248 Query: 216 G 216 G Sbjct: 249 G 249 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 6/151 (3%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A+++ IP G +G +++ + P LL + P + Sbjct: 104 WNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLP--IGL 161 Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + P S IF + W ++ N G + P D+ VA ++ W R I+ Sbjct: 162 LLFQRAEP---ASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILF 218 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWG 530 P + PY +TG + G AW + +E+ + G Sbjct: 219 PAVLPYVLTGVRLSIGIAWLVIVAAEMLTGG 249 >gi|121610891|ref|YP_998698.1| nitrate ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121555531|gb|ABM59680.1| nitrate ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 295 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 12/178 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + IA+++ IP+G +G P + + PF Q+L + PL + + Sbjct: 107 SLARVGLGFAIAAVVAIPLGFLLGMSPLMQRALNPFIQILKPISPLAWMPLALYTIKDSS 166 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ + +IF + W +L N G ++ D+ A + + R +ILP P Sbjct: 167 IS-----GIFVIFICSVWPMLMNTAFGVASVRRDWLNAAKTLEVKPLRKAFLVILPAAAP 221 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +TG + G AW + +E+ G TG+G Y+ S V+ +L++ Sbjct: 222 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLSLTSVIFAILLI 273 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 7/127 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + ++ IF IF VW M + + ++ RD +++ + +K + + +P + P ++ Sbjct: 165 SSISGIFVIFICSVWPMLMNTAFGVASVRRDWLNAAKTLEVKPLRKAFLVILPAAAPTIL 224 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +SM W +VA+EM+V G GIG Y+ L ++++A+L ++GV Sbjct: 225 TGMRISMGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLSLTSVIFAIL-LIGVTG 277 Query: 254 LYDQLLF 260 + L+F Sbjct: 278 MLLDLVF 284 >gi|294341848|emb|CAZ90277.1| putative Nitrate transport permease protein nrtB [Thiomonas sp. 3As] Length = 285 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 12/179 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++RVV+ ++A+ I +P+GI+IG + +QP + PA+ F PLV+ V Sbjct: 94 ISIYRVVMGFVLAAAIGVPLGIYIGAYKWFEALLQPVNDFVRYMPASAFIPLVLLWVGIG 153 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + +IF G + I+ V P ++ EVA + + +I GI Sbjct: 154 EGS-----KIAIIFIGVIFQIIVMVADAVRRVPENYLEVAYTMGARQGEVMQLVIWRGIL 208 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P + G AW +V+E+ + +GLG I +S + P++ +G+ I+ Sbjct: 209 PELLDILRINMGWAWTYLVVAEMVA------ANSGLGFQILQSQRFLNTPKIFVGIFII 261 >gi|237723326|ref|ZP_04553807.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_2_4] gi|293373152|ref|ZP_06619514.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f] gi|298480784|ref|ZP_06998980.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. D22] gi|229447848|gb|EEO53639.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_2_4] gi|292631800|gb|EFF50416.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f] gi|298273218|gb|EFI14783.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. D22] Length = 274 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 22/134 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R +L P+LD+MQ++P +L V++F L A+ +F + ++ M Sbjct: 111 ANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF-----------GLGAVPGVFATIIFAM 159 Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203 + + + +P+++ E SRSF + WQ + + +P ++P G+ +MMS+S Sbjct: 160 PPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS-- 217 Query: 204 WFFVVASEMIVVGD 217 VV + MI G Sbjct: 218 --MVVIAAMIAAGG 229 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AW G FT +L + +G T+ V +A I+ +P+G+W P Sbjct: 56 LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLALIVGVPLGVWTANSPR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++P L+ PA V+ + V ++ L + +IF + + G Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|170021256|ref|YP_001726210.1| taurine transporter subunit [Escherichia coli ATCC 8739] gi|194438856|ref|ZP_03070941.1| taurine uptake ABC transporter, permease protein [Escherichia coli 101-1] gi|253774648|ref|YP_003037479.1| taurine transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160436|ref|YP_003043544.1| taurine transporter subunit [Escherichia coli B str. REL606] gi|297516855|ref|ZP_06935241.1| taurine transporter subunit [Escherichia coli OP50] gi|300930341|ref|ZP_07145753.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|169756184|gb|ACA78883.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli ATCC 8739] gi|194422150|gb|EDX38152.1| taurine uptake ABC transporter, permease protein [Escherichia coli 101-1] gi|242376149|emb|CAQ30838.1| tauC, subunit of taurine ABC transporter [Escherichia coli BL21(DE3)] gi|253325692|gb|ACT30294.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972337|gb|ACT38008.1| taurine transporter subunit [Escherichia coli B str. REL606] gi|253976546|gb|ACT42216.1| taurine transporter subunit [Escherichia coli BL21(DE3)] gi|300461801|gb|EFK25294.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|309700630|emb|CBI99926.1| taurine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|323938554|gb|EGB34803.1| inner membrane transport system [Escherichia coli E1520] gi|323963355|gb|EGB58917.1| inner membrane transport system [Escherichia coli H489] Length = 275 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 N + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GE-NSKILLIYLAIFAP---VAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 12/148 (8%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +R L +L+A+VI + S + +L PI+++ + +P L +L V++F Sbjct: 85 TRIVLALLAAVVIGIPVGIAMGL----SPTVRGILDPIIELYRPVPPLAYLPLMVIWFG- 139 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 IG E + I I+ + + S + ++ + +RS S Q W++ + Sbjct: 140 ------IG-ENSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVIL 192 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213 P ++P ++ + + + GW +VA+E+I Sbjct: 193 PGALPEILTGLRIGLGVGWSTLVAAELI 220 >gi|73668564|ref|YP_304579.1| sulfonate ABC transporter permease [Methanosarcina barkeri str. Fusaro] gi|72395726|gb|AAZ69999.1| sulfonate ABC transporter, permease protein [Methanosarcina barkeri str. Fusaro] Length = 261 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 9/120 (7%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 + + + PI++I++ IP + ++ F +++F + AA F +F V+ + + Sbjct: 92 KEINRAIDPIIEILRPIPPIAWIPFAIIWFGLTHQ--------AAGFVVFAGMVFPIIIN 143 Query: 154 MYQSLCNIPRDLEEVSRSFRLS-GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 Y N+P+ E +R + Y+ +P +MP +V + ++M GW +VA+EM Sbjct: 144 TYTGFKNVPKVYVEAARVLGCTRNLDLIRYIAIPSAMPSIVAGIRIAMGVGWMCLVAAEM 203 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 5/131 (3%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +I IP+GI +G+ I+ I P ++L P + P + H + M Sbjct: 77 AFVIGIPLGIAMGWFKEINRAIDPIIEILRPIPPIAWIPFAIIWFGLTHQAAGFVVFAGM 136 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWRYIILPGIFPYYVTGAITACG 515 +F I+ N G P + E A T RYI +P P V G A G Sbjct: 137 VFP----IIINTYTGFKNVPKVYVEAARVLGCTRNLDLIRYIAIPSAMPSIVAGIRIAMG 192 Query: 516 GAWNASIVSEV 526 W + +E+ Sbjct: 193 VGWMCLVAAEM 203 >gi|206577350|ref|YP_002238921.1| putative sulfonate ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|206566408|gb|ACI08184.1| putative sulfonate ABC transporter, permease protein [Klebsiella pneumoniae 342] Length = 522 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 8/118 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ + IP LG++ +V F G G +LA I + V MT + Q++ ++ Sbjct: 106 PLFYALAQIPTLGWIPLLMVLF-----GIDNGLKLAVIV---KTTVVPMTINTQQAVASV 157 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 P+ L E R S WQ+ +L +P S+PG + +++S W ++ E++ + + Sbjct: 158 PQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSEGI 215 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 13/152 (8%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 R G + P L++++ I + +L + N GK++ LA+ F +F FS Sbjct: 355 RAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFFPMF--------FST 406 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 Q++ L+EV+R RL + + + +P + PG+ + +++ W + +E + Sbjct: 407 LQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFM 466 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 GIGS + A + D+ IL M+ Sbjct: 467 SSGV-----GIGSLMINAQQLLDMPTILCGMV 493 >gi|295085035|emb|CBK66558.1| ABC-type proline/glycine betaine transport system, permease component [Bacteroides xylanisolvens XB1A] Length = 274 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 22/134 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R +L P+LD+MQ++P +L V++F L A+ +F + ++ M Sbjct: 111 ANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF-----------GLGAVPGVFATIIFAM 159 Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203 + + + +P+++ E SRSF + WQ + + +P ++P G+ +MMS+S Sbjct: 160 PPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS-- 217 Query: 204 WFFVVASEMIVVGD 217 VV + MI G Sbjct: 218 --MVVIAAMIAAGG 229 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AW G FT +L + +G T+ V +A I+ +P+G+W P Sbjct: 56 LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLALIVGVPLGVWTANSPR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++P L+ PA V+ + V ++ L + +IF + + G Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|160881959|ref|YP_001560927.1| binding-protein-dependent transport systems inner membrane component [Clostridium phytofermentans ISDg] gi|160430625|gb|ABX44188.1| binding-protein-dependent transport systems inner membrane component [Clostridium phytofermentans ISDg] Length = 286 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 N ++ +S LM+ I NV+ G + E+A+ FH++G R ++I LP + PY+ Sbjct: 150 NLSILISFLMVLPI---IYTNVLKGVESADQGLLEMAAVFHMSGLRKLKFIYLPAVMPYF 206 Query: 507 VTGAITACGGAWNASIVSEV 526 V+ G W + I +EV Sbjct: 207 VSACSVGLGFCWKSGIAAEV 226 >gi|148259997|ref|YP_001234124.1| binding-protein-dependent transport systems inner membrane component [Acidiphilium cryptum JF-5] gi|326403047|ref|YP_004283128.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|146401678|gb|ABQ30205.1| binding-protein-dependent transport systems inner membrane component [Acidiphilium cryptum JF-5] gi|325049908|dbj|BAJ80246.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 286 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 26/178 (14%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA L +L P+LD+MQ++P +L T+V F + PG L + Sbjct: 125 AAHHPTLYRILRPVLDLMQTLPTFVYLIPTLVLFGLGSVPG------LISTVVFVVPTPV 178 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 +T Y + N+PR L E ++F S W+ W + +P +MP GL +M+S+S Sbjct: 179 RLT---YVGIVNVPRPLIEAGQAFGASPWELLWKVEIPAAMPTILAGLTQVIMLSLS--- 232 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 VV + ++ G G+G + A++ + + L ++ V + D+ +FRP Sbjct: 233 -MVVIAALVGAG-------GLGEPVVEAMETVQIGRGFTSGLAIVIVAVILDR-VFRP 281 >gi|261856785|ref|YP_003264068.1| nitrate ABC transporter inner membrane subunit [Halothiobacillus neapolitanus c2] gi|261837254|gb|ACX97021.1| nitrate ABC transporter, inner membrane subunit [Halothiobacillus neapolitanus c2] Length = 280 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++A I+ IP+G IG P + + P+ QLL + PL + + + Sbjct: 92 SLGRVLAGFLLAVIVAIPLGFLIGMSPLVFKALNPYIQLLKPISPLAWMPLALYTIKDAN 151 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + S+ +IF + W ++ N G ++ D+ VA + +T + +ILP P Sbjct: 152 AS-----SIFVIFICSIWPMMINTAHGVASVRKDWLNVAKTLEVTPLKTAITVILPAAAP 206 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +TG + G AW + +E+ G TG+G ++ Sbjct: 207 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFV 239 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 7/127 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 A ++IF IF +W M + + ++ +D V+++ ++ + + +P + P ++ Sbjct: 150 ANASSIFVIFICSIWPMMINTAHGVASVRKDWLNVAKTLEVTPLKTAITVILPAAAPTIL 209 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +SM W +VA+EM+V G GIG ++ +L +++A+ M+GV+ Sbjct: 210 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLNLANVIFAIF-MIGVVG 262 Query: 254 LYDQLLF 260 + +F Sbjct: 263 MLLDAIF 269 >gi|134293652|ref|YP_001117388.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] gi|134136809|gb|ABO57923.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] Length = 295 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + +LF FV +LA +R VL + + +P + L +++F L G + Sbjct: 102 LLRGYALGVLFAFVLTSLAVSTRAGRDVLSMLTSMFNPLPSIALLPIALLWF-GLGTGSL 160 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + F + + +W + SMY +P L+ R++ LSG ++ + VP ++P Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLSGLRQIALILVPAALPS 213 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235 >gi|237713750|ref|ZP_04544231.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409343|ref|ZP_06085886.1| choline ABC transporter, permease [Bacteroides sp. 2_1_22] gi|294805993|ref|ZP_06764860.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC 1b] gi|229446197|gb|EEO51988.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352795|gb|EEZ01892.1| choline ABC transporter, permease [Bacteroides sp. 2_1_22] gi|294446875|gb|EFG15475.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC 1b] Length = 274 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 22/134 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R +L P+LD+MQ++P +L V++F L A+ +F + ++ M Sbjct: 111 ANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF-----------GLGAVPGVFATIIFAM 159 Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203 + + + +P+++ E SRSF + WQ + + +P ++P G+ +MMS+S Sbjct: 160 PPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS-- 217 Query: 204 WFFVVASEMIVVGD 217 VV + MI G Sbjct: 218 --MVVIAAMIAAGG 229 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AW G FT +L + +G T+ V +A I+ +P+G+W P Sbjct: 56 LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLALIVGVPLGVWTANSPR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++P L+ PA V+ + V ++ L + +IF + + G Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|241113176|ref|YP_002973011.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861384|gb|ACS59050.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 295 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 17/193 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT + V+S+ L A+S RL V+ PILD+MQ++P +L V M L Sbjct: 102 RTVSMIFVCTVLSIAIGIPMGILMARSDRLQRVINPILDVMQTMPSFVYLIPVV---MLL 158 Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GKV G I+AI ++ ++ + + +D+ E + +F S QK + + + Sbjct: 159 GIGKVPGLIAVVIYAIPPMIRLTDLGIRL------VDKDVLEAADAFGTSSSQKLFKVQL 212 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P ++ + ++ VV + MI V G+G + AI Q ++ Sbjct: 213 PLALPTIMAGINQTIMMALAMVVVASMIGV-------QGLGQPVLKAIANQYFTLGIFNG 265 Query: 246 LTMLGVIFLYDQL 258 L ++G+ ++D++ Sbjct: 266 LAIVGIAIIFDRV 278 >gi|160886481|ref|ZP_02067484.1| hypothetical protein BACOVA_04492 [Bacteroides ovatus ATCC 8483] gi|156108366|gb|EDO10111.1| hypothetical protein BACOVA_04492 [Bacteroides ovatus ATCC 8483] Length = 274 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 22/134 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R +L P+LD+MQ++P +L V++F L A+ +F + ++ M Sbjct: 111 ANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFF-----------GLGAVPGVFATIIFAM 159 Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203 + + + +P+++ E SRSF + WQ + + +P ++P G+ +MMS+S Sbjct: 160 PPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMMSLS-- 217 Query: 204 WFFVVASEMIVVGD 217 VV + MI G Sbjct: 218 --MVVIAAMIAAGG 229 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AW G FT +L + +G T+ V +A II +P+G+W P Sbjct: 56 LAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLALIIGVPLGVWTANSPR 115 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++P L+ PA V+ + V ++ L + +IF + + G Sbjct: 116 AEKILRPVLDLMQTMPAFVYL---IPAVLFFGLGAVPGVFATIIFAMPPVVRLTGL-GIR 171 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P + E + SF T W+ + LP P +TG Sbjct: 172 QVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTG 207 >gi|39935182|ref|NP_947458.1| nitrate transport system permease [Rhodopseudomonas palustris CGA009] gi|39649033|emb|CAE27554.1| possible nitrate transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 279 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++A ++ IP+G IG P ++ + PF Q+L + PL + + Sbjct: 91 SIARVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSS 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N G ++ ++ VA + + R +ILP P Sbjct: 151 LS-----AIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V++ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIVNVIIAILMIGL 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMLLDQVL 268 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 14/191 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+++ ++++L L S + L P + +++ I L ++ + + Sbjct: 94 RVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKD----- 148 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + L+AIF IF VW M + + ++ ++ V+R+ + ++ + + +P + P Sbjct: 149 ---SSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ M +S+ W +VA+EM+V G GIG ++ ++ ++ A+L + Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIVNVIIAILMIGL 259 Query: 251 VIFLYDQLLFR 261 V L DQ+L R Sbjct: 260 VGMLLDQVLAR 270 >gi|66045751|ref|YP_235592.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|63256458|gb|AAY37554.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas syringae pv. syringae B728a] gi|330971226|gb|EGH71292.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 282 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + LS ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 G ++ + +L A++ + + L D LL + + W + F + G Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLASLEKRFLAWRDTFNGQSREG 282 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + ++ +R R I+ Sbjct: 137 ----LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + +W + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|311280742|ref|YP_003942973.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] gi|308749937|gb|ADO49689.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] Length = 275 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A++I +PVGI +G P + + P +L P + PL+V Sbjct: 83 SLTRIVIALLAATVIGVPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSVQQVRLRAAQSLGASRAQILWFVILPGALPD 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|239814868|ref|YP_002943778.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239801445|gb|ACS18512.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 257 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 19/209 (9%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +TTL L +++L A + A SR + + P+L QSIP + VV+F Sbjct: 61 KTTLATLGGFGLTILIGIPIAMVIAYSRLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFG 120 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 ++P KVI A L F + S V M F ++ D+ +++RS S Q F+ + + Sbjct: 121 IFP-KVISAFLLGFFPVVVSTV--MGFK------SVEPDMLDLARSMGASRLQTFFKISL 171 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +MP + + +S++ +A VVG+ V GIG + +A DL + A+ Sbjct: 172 PQAMPAIFSGLKVSVT------LAVVGAVVGEFVGSNSGIGYVLQVANGNFDLPLMFAAL 225 Query: 246 --LTMLGVI-FLYDQLLFRPMIVWSNKFR 271 L+ +GVI F+ ++ R MI W R Sbjct: 226 VVLSSIGVILFVAVDIVERVMIPWHASQR 254 >gi|253997022|ref|YP_003049086.1| nitrate ABC transporter inner membrane subunit [Methylotenera mobilis JLW8] gi|253983701|gb|ACT48559.1| nitrate ABC transporter, inner membrane subunit [Methylotenera mobilis JLW8] Length = 280 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F P AAI+ IF S VW M + + + Sbjct: 127 PVISLLRPVSPLAWLPIGLLVFKAANP--------AAIWVIFISAVWPMIINTAVGVNKV 178 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V++ LS W+ + PF +P ++ + +S+ W +VA+EM+ G Sbjct: 179 PQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG 233 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A++I IP+G IG ++ P LL + P + + + NP ++ Sbjct: 103 LAALIGIPLGFIIGRFEFVARMTAPVISLLRPVSPLAWLP--IGLLVFKAANPA---AIW 157 Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +IF W ++ N G + P D+ VA +++ W+ I+ P + PY +TG + Sbjct: 158 VIFISAVWPMIINTAVGVNKVPQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSI 217 Query: 515 GGAWNASIVSEVASWG 530 G AW + +E+ + G Sbjct: 218 GVAWLVIVAAEMLTGG 233 >gi|326317135|ref|YP_004234807.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373971|gb|ADX46240.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] Length = 289 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ +A+++ +P+GI +G + + ++PF PA+ F PL++ Sbjct: 98 MTVWRVLGGFALAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGLG 157 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L LL+IF G+ + I+ V + D E A + T R +++PG Sbjct: 158 ELQ-----KLLVIFIGSVFQIILMVAVTVGSARKDLVEAAYTLGATPTGIVRRVLIPGAA 212 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P+ G AW IV+E+ ++G+G I +S Sbjct: 213 PHIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 249 >gi|308186604|ref|YP_003930735.1| Nitrate transport permease protein nrtB [Pantoea vagans C9-1] gi|308057114|gb|ADO09286.1| Nitrate transport permease protein nrtB [Pantoea vagans C9-1] Length = 290 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F AE AA + IF +W M + + + I Sbjct: 136 PIIALLRPVSPLAWLPIGLLLFQR--------AEPAASWTIFICSIWPMIINTAEGVQRI 187 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + +P +P ++ + +S+ W +VA+EM+ G Sbjct: 188 PQDYLNVARVLQLSEWTVMRRILLPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 242 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP G +G ++ P LL + P + + + Sbjct: 102 SLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSPLAWLP--IGLLLFQR 159 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ W R I+LP + P Sbjct: 160 AEPAA--SWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTVMRRILLPAVLPA 217 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 218 VLTGVRLSIGIAWLVIVAAEMLTGG 242 >gi|310767201|gb|ADP12151.1| Aliphatic sulfonates transport permease protein [Erwinia sp. Ejp617] Length = 263 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 24/190 (12%) Query: 95 RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ + +++++P L + +++F K+ L +F I+ + Sbjct: 91 RLGERLLDTSVQMLRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------IN 142 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + NI R L E++RS+ LSGW F + +P ++P ++ + ++ W + Sbjct: 143 TWHGIRNIDRGLLEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFALGLMWL------TL 196 Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267 +V +T+ GIG Y+A+ +E D++ ILYA+L L + QLL R + W Sbjct: 197 IVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERVWLRWH 253 Query: 268 NKFRLERTTG 277 ++L+ Sbjct: 254 PAYQLKEENA 263 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++GW + ++LPG P + G A Sbjct: 130 LVALGTLFPIYINTWHGIRNIDRGLLEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571 G W IV+E S +G+G Y+A + + +VV+ +I+ + L Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVSA 242 Query: 572 -------FLWHPLY 578 WHP Y Sbjct: 243 QLLERVWLRWHPAY 256 >gi|254487030|ref|ZP_05100235.1| nitrate ABC transporter, permease component [Roseobacter sp. GAI101] gi|214043899|gb|EEB84537.1| nitrate ABC transporter, permease component [Roseobacter sp. GAI101] Length = 357 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 20/198 (10%) Query: 77 VISLLFTFVYATL--------AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY- 127 + ++ F F+ A+L A S+ L P++ I + + L +L + +Y Sbjct: 154 IKTVFFGFLIASLVAIPLGIAAGLSKTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYA 213 Query: 128 --PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G + L + + +W + + +I +DL VSR +++ W K L + Sbjct: 214 SNDGMFSKSFLISAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTWTKITKLVL 273 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAIL 242 P ++P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ Sbjct: 274 PSALPLIFTGLRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLAKIM 327 Query: 243 YAMLTMLGVIFLYDQLLF 260 A+ T+ + FL D+++F Sbjct: 328 VAVFTIGIIGFLLDRVMF 345 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 15/186 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453 +IAS++ IP+GI G ++ + P Q+ + P+V VS Y N ++ Sbjct: 162 LIASLVAIPLGIAAGLSKTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYASNDGMFSK 221 Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 +I + W L N G S+ D V+ + W ++LP P Sbjct: 222 SFLISAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTWTKITKLVLPSALPLIF 281 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LAKIMVAVFTI 333 Query: 568 ALNRFL 573 + FL Sbjct: 334 GIIGFL 339 >gi|154496978|ref|ZP_02035674.1| hypothetical protein BACCAP_01271 [Bacteroides capillosus ATCC 29799] gi|150273802|gb|EDN00919.1| hypothetical protein BACCAP_01271 [Bacteroides capillosus ATCC 29799] Length = 249 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%) Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 +++S + + N ++ +S LM+ + V+ G A + E+A F I R R Sbjct: 106 IILSLILFSSRNLSILISFLMVLPVLYS---GVLGGIRAMDSQMLEMAQLFRIPTLRRIR 162 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 Y+ LP + PY+ ++A G W + I +EV I + T +G + ++ P++ Sbjct: 163 YVYLPQVLPYFQAACVSALGLCWKSGIAAEV-----IGMPTGSIGERLQQAKVYLDTPDL 217 Query: 556 VLGVLIMCCFVLALNRF 572 L++ L RF Sbjct: 218 FAWTLVIVLVSLLFERF 234 >gi|192290788|ref|YP_001991393.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas palustris TIE-1] gi|192284537|gb|ACF00918.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris TIE-1] Length = 279 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++A ++ IP+G IG P ++ + PF Q+L + PL + + Sbjct: 91 SIARVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSS 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N G ++ ++ VA + + R +ILP P Sbjct: 151 LS-----AIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V++ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIVNVIIAILMIGL 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMLLDQVL 268 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 14/191 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+++ ++++L L S + L P + +++ I L ++ + + Sbjct: 94 RVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKD----- 148 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + L+AIF IF VW M + + ++ ++ V+R+ + ++ + + +P + P Sbjct: 149 ---SSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ M +S+ W +VA+EM+V G GIG ++ ++ ++ A+L + Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIVNVIIAILMIGL 259 Query: 251 VIFLYDQLLFR 261 V L DQ+L R Sbjct: 260 VGMLLDQVLAR 270 >gi|114705138|ref|ZP_01438046.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Fulvimarina pelagi HTCC2506] gi|114539923|gb|EAU43043.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Fulvimarina pelagi HTCC2506] Length = 280 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + +LSA ++ + AA ++ L P+LD+MQ++P +L +V+ Sbjct: 91 EEMTESLTLVLSACIVCMAIGVPIGIAAAHRPKVYAFLQPVLDLMQTLPTFVYLIPAIVF 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG LA + + + + +T Y + + P+ L E + +F +G QK W Sbjct: 151 FGIGMVPGL-----LATVIFVLPAPI-RLT---YLGVSSTPKSLLEAADAFGATGSQKLW 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 202 KVELPYALPQIMAGLNQTIMLSLS 225 >gi|330944591|gb|EGH46545.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 226 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 16/170 (9%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 EV + + LS ++ + +P ++PGL + MS W F+VA+E+I Sbjct: 174 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAA 223 >gi|310826693|ref|YP_003959050.1| hypothetical protein ELI_1099 [Eubacterium limosum KIST612] gi|308738427|gb|ADO36087.1| hypothetical protein ELI_1099 [Eubacterium limosum KIST612] Length = 270 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 11/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+ IA + + +G G P + P L+ A P + P+ + Sbjct: 73 ISLLRVLSGFFIAGSLGMIMGFLTGRIPVLKRLFDPVIHLIKAVPGIGWLPIAIVWFGVG 132 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 N +SL F + N AGA+A P + + G+ +R I+ P FP Sbjct: 133 EGNTLFLMSLAAFF----PVYVNTAAGAAAIPEMYIQAGQMLGAQGFGLFRAIVFPAAFP 188 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G G AW ++ EV T GLGA ++++ G E+VL +I+ Sbjct: 189 QAAVGLRLGLGVAWAYLVLGEVTG------VTKGLGAIMSDARMLGHV-EMVLTAMIVIA 241 Query: 565 FVLALNRFL 573 + FL Sbjct: 242 VAAKVTDFL 250 >gi|260223152|emb|CBA33430.1| Nitrate transport permease protein nrtB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 312 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IPVG IG +S P LL + P + + + Sbjct: 121 SLKRVAMGFGLAAVVGIPVGFMIGRFEFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 178 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 179 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILFPSVLPY 236 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 237 MLTGVRLAVGTAWLVIVAAEMLTGG 261 Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 155 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 206 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 207 PQDYMNVARVLNLSEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 261 >gi|259908898|ref|YP_002649254.1| Aliphatic sulfonates transport permease protein [Erwinia pyrifoliae Ep1/96] gi|224964520|emb|CAX56030.1| Aliphatic sulfonates transport permease protein [Erwinia pyrifoliae Ep1/96] gi|283478892|emb|CAY74808.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia pyrifoliae DSM 12163] Length = 263 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 24/190 (12%) Query: 95 RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ + +++++P L + +++F K+ L +F I+ + Sbjct: 91 RLGERLLDTSVQMLRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------IN 142 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + NI R L E++RS+ LSGW F + +P ++P ++ + ++ W + Sbjct: 143 TWHGIRNIDRGLLEMARSYGLSGWSLFIQVLLPGALPSIMVGVRFALGLMWL------TL 196 Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267 +V +T+ GIG Y+A+ +E D++ ILYA+L L + QLL R + W Sbjct: 197 IVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERVWLRWH 253 Query: 268 NKFRLERTTG 277 ++L+ Sbjct: 254 PAYQLKEENA 263 Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++GW + ++LPG P + G A Sbjct: 130 LVALGTLFPIYINTWHGIRNIDRGLLEMARSYGLSGWSLFIQVLLPGALPSIMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571 G W IV+E S +G+G Y+A + + +VV+ +I+ + L Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVSA 242 Query: 572 -------FLWHPLY 578 WHP Y Sbjct: 243 QLLERVWLRWHPAY 256 >gi|28870234|ref|NP_792853.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213970351|ref|ZP_03398480.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381134|ref|ZP_07229552.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302058923|ref|ZP_07250464.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132547|ref|ZP_07258537.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853480|gb|AAO56548.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924822|gb|EEB58388.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331015472|gb|EGH95528.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 321 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 43/238 (18%) Query: 68 TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL + L+++V ++ L A+S RL VL P LD MQ++P +L V+ F Sbjct: 100 TTLSLVLTSLVFCVVIGVPLGVLCARSDRLERVLRPGLDAMQTLPAFVYLVPVVMLF--- 156 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IF++ V + Q +P D E +R+F + Q + + +P Sbjct: 157 GIGNVPGVLVTIIFSV-APLVRLTNLGIRQ----VPEDKVEAARAFGCTRRQMLFKVQLP 211 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-LAI 241 + P GL +M+S+S VV + MI VG G+G + I D+ LA Sbjct: 212 LAAPTIMAGLNQALMLSLS----MVVIASMISVG-------GLGLMVLRGIGRLDMGLAT 260 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNK----------------FRLERTTGIYPADS 283 + + +L IFL L + M SNK F+L++ T PA + Sbjct: 261 VGGVGLVLLAIFL--DRLTQAMGERSNKAVNGEHWYQTGPVGIVFKLKKKTASTPAGA 316 >gi|302873274|ref|YP_003841907.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|307688559|ref|ZP_07631005.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|302576131|gb|ADL50143.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] Length = 253 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +D + ++G I+++R V IA+I I +G+ G+ I P Q+L + Sbjct: 50 EDKILFKYIG-ISLYRFAVGYFIAAIFAIALGLIFGWYKKAWDIIDPIVQVLRPVSPIAW 108 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP +V +L ++++IF ++ IL + + + +VAS+F I G + Sbjct: 109 FPFIVIIFGIGNLP-----AIVIIFIAAFFPILLSTVTAVKNIEKSYLKVASNFEIKGLK 163 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 I+LP IFPY A G AW + E+ +GLG I ++ Sbjct: 164 LMGKIVLPAIFPYIANAMHIALGSAWVFLVAGEMVG------AQSGLGYLIIDA 211 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/177 (19%), Positives = 80/177 (45%), Gaps = 10/177 (5%) Query: 39 IQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 + +T++P ++V + ++ L +Y + R I+ +F + ++ Sbjct: 30 VGKTSIPSPLEVVKAIKDMIEDKILFKYIGISLYRFAVGYFIAAIFAIALGLIFGWYKKA 89 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 ++ PI+ +++ + + + F V+ F IG L AI IF + + + S Sbjct: 90 WDIIDPIVQVLRPVSPIAWFPFIVIIFG-------IG-NLPAIVIIFIAAFFPILLSTVT 141 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ NI + +V+ +F + G + + +P P + M +++ W F+VA EM+ Sbjct: 142 AVKNIEKSYLKVASNFEIKGLKLMGKIVLPAIFPYIANAMHIALGSAWVFLVAGEMV 198 >gi|304397577|ref|ZP_07379454.1| nitrate ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304354749|gb|EFM19119.1| nitrate ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 290 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F AE AA + IF +W M + + + I Sbjct: 136 PIIALLRPVSPLAWLPIGLLLFQR--------AEPAASWTIFICSIWPMIINTAEGVQRI 187 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + +P +P ++ + +S+ W +VA+EM+ G Sbjct: 188 PQDYLNVARVLQLSEWTVMRRILLPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 242 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP G +G ++ P LL + P + + + Sbjct: 102 SLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSPLAWLP--IGLLLFQR 159 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ W R I+LP + P Sbjct: 160 AEPAA--SWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTVMRRILLPAVLPA 217 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 218 VLTGVRLSIGIAWLVIVAAEMLTGG 242 >gi|258405766|ref|YP_003198508.1| binding-protein-dependent transport systems inner membrane component [Desulfohalobium retbaense DSM 5692] gi|257797993|gb|ACV68930.1| binding-protein-dependent transport systems inner membrane component [Desulfohalobium retbaense DSM 5692] Length = 259 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 17/174 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R++ +++LF A S+R + P+++ + +P++ + T++YF Sbjct: 68 STYRVMVGWALAVLFGVPLGLAIATSKRTAAICAPLIEFARYLPVVALVPLTLLYFG--- 124 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG + IF + + + S+ +P DL + + S Q + + P Sbjct: 125 ----IG-DAQKFVVIFLGTFFQLVLMVVDSVAAVPADLTRAAATLGASRAQSYRLVLFPG 179 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 ++PG++ N+ +++ W ++V +E++ G+G I ++ Q LAI Sbjct: 180 ALPGILDNLRITIGWAWTYLVVAELVAANS------GLGYMI---LRAQRFLAI 224 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 28/143 (19%), Positives = 63/143 (44%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + +RV+V +A + +P+G+ I ++ P + P PL + Y+ Sbjct: 68 STYRVMVGWALAVLFGVPLGLAIATSKRTAAICAPLIEFARYLPVVALVPL---TLLYFG 124 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + +++ GT + ++ V+ +A P D A++ + + +R ++ PG P Sbjct: 125 IG-DAQKFVVIFLGTFFQLVLMVVDSVAAVPADLTRAAATLGASRAQSYRLVLFPGALPG 183 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 + G AW +V+E+ + Sbjct: 184 ILDNLRITIGWAWTYLVVAELVA 206 >gi|251783394|ref|YP_002997699.1| glycine betaine-binding protein/glycinebetaine transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392026|dbj|BAH82485.1| glycine betaine-binding protein/glycinebetaine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 575 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS+L AK+ + V+ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISVLIGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|218549967|ref|YP_002383758.1| taurine transporter subunit [Escherichia fergusonii ATCC 35469] gi|218357508|emb|CAQ90147.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|325498342|gb|EGC96201.1| taurine transporter subunit [Escherichia fergusonii ECD227] Length = 275 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M R+++ +I A +I IP G+ +G P I + P +L P + PL+V Sbjct: 83 SMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + L L IF + + +AG + A S + Y+ILPG P Sbjct: 143 -TPKVLLIWLAIFAP---LTMSALAGVQSVQQVRIRAAQSLGANRVQVLWYVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563 +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252 Query: 564 CFVL-----ALNRFL--WH 575 F+L AL R L WH Sbjct: 253 AFLLELSLRALQRRLTPWH 271 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R+L A++ +++ S + +L PI+++ + +P L +L V++ Sbjct: 78 QHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F KV+ LA IFA +T S + ++ + ++S + Q WY Sbjct: 138 FGIGETPKVLLIWLA-IFA-------PLTMSALAGVQSVQQVRIRAAQSLGANRVQVLWY 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELI 220 >gi|330965303|gb|EGH65563.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 282 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS +I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ KV+ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + S ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAATK------GL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270 G ++ + +L A++ + + L D LL R + W + F Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLERRFLAWRDTF 275 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + AW + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|331698281|ref|YP_004334520.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326952970|gb|AEA26667.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 300 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 15/227 (6%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W S +V VL ++W ++ R V +A +I +P+G+ + + + I P Sbjct: 82 WDSFATVVGD---GQVLSILW---TSISRAFVGFAMALVIAVPLGLLVARVRVVRAAIGP 135 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 L + P+ + P + V ++ L + + +++ G+ I +++G P F Sbjct: 136 LLSGLQSLPSVAWVP---AAVLWFGLTDST-IYFVVLAGSIPSIANGLVSGIDQIPPIFP 191 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V +G R+I+LP P ++ G +W + + +E+ + G L GLG Sbjct: 192 RVGKVIGASGLATARHILLPAALPGFLAGCKQGWAFSWRSLMAAEIIAAG--PLLGIGLG 249 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 A++ E ++ P+V+ + ++ + + ++ P+ R LR+ Sbjct: 250 AFLKEGSDFNDMPKVIAAIFLILVVGIGIELLIFRPIE---RRVLRV 293 >gi|282897797|ref|ZP_06305794.1| Nitrate transport permease [Raphidiopsis brookii D9] gi|281197281|gb|EFA72180.1| Nitrate transport permease [Raphidiopsis brookii D9] Length = 265 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+V ++IA + +P+GI++G + QL+ + P+ V + Sbjct: 77 SLRRVLVGLLIAISLGVPMGIFLGMYRSLDLATSVLFQLVRMISPLSWMPIAVMVLGIGD 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L LS+ I W ++ N AG +A + ++ S T W +I+P I P+ Sbjct: 137 LPVYFLLSISAI----WAVILNTSAGVTAVDTQWLLLSKSLCATKWETISQVIIPAIIPH 192 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +TG A G W + +E+ GLG +I ++ ++ ++ E+ ++I+ Sbjct: 193 LLTGIRLAMGVIWIVLVPAEMLG------VNAGLGYFILDTRDRLAYSELAAVIVII 243 >gi|21229643|ref|NP_635560.1| ABC transporter amino acid permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766519|ref|YP_241281.1| ABC transporter amino acid permease [Xanthomonas campestris pv. campestris str. 8004] gi|21111122|gb|AAM39484.1| ABC transporter amino acid permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571851|gb|AAY47261.1| ABC transporter amino acid permease [Xanthomonas campestris pv. campestris str. 8004] Length = 490 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 16/191 (8%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++L+ LAA+ RLG V++ + ++Q++P L F + F IGA+ Sbjct: 306 LALVMALPLGVLAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-P 357 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AI A+F + + + + L +IPR+L + + + L W + W + +P + +V + Sbjct: 358 AIAALFLYSLLPIVRNTHAGLTSIPRELRQTAEAIGLPAWTRLWRIELPLARRTIVAGIQ 417 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + V+ +G +I G G I I+ D+ IL + V+ L Q Sbjct: 418 TAA------VINVGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIPA-AVLALLVQ 469 Query: 258 LLFRPMIVWSN 268 LF + W+ Sbjct: 470 ALFEGLERWAT 480 >gi|316934735|ref|YP_004109717.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas palustris DX-1] gi|315602449|gb|ADU44984.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris DX-1] Length = 279 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ ++A + IP+G IG P ++ + PF Q+L + PL + + Sbjct: 91 SIARVMIGYLLAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALYTIKDSS 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N G ++ ++ VA + + R +ILP P Sbjct: 151 LS-----AVFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V++ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSIVNVIIAILMIGL 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMLLDQVL 268 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+A+F IF VW M + + ++ ++ V+R+ + ++ + + +P + P ++ Sbjct: 149 SSLSAVFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGTVRRAFTVILPAAAPTIL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ ++ ++ A+L + V Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIVNVIIAILMIGLVGM 262 Query: 254 LYDQLLFR 261 L DQ+L R Sbjct: 263 LLDQVLAR 270 >gi|154247972|ref|YP_001418930.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154162057|gb|ABS69273.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 273 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + + + + +P+G+++G I I P Q+L P + PL + ++ Sbjct: 80 SLTRVALGFFVGAGLALPLGLFMGSSDTIYRHINPLMQVLRPIPPIAYIPL---SILWFG 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L N L+ G + +L N IAG + A S + +R +ILP PY Sbjct: 137 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRLTIFRRVILPAATPY 195 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 ++GA G A+ IV+E+ + GLG I E+ E +++ G+ + Sbjct: 196 ILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMFTIGLL 249 Query: 566 VLALN 570 LA++ Sbjct: 250 GLAID 254 >gi|331698798|ref|YP_004335037.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326953487|gb|AEA27184.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 276 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 10/186 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V +II ++ IP+G+ IG + +P ++ + P VF P++ + ++ Sbjct: 85 TLESVACGMIITVVVGIPLGLLIGRSNTLYGLTEPLVSIMYSVPFVVFLPII---IFWFG 141 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L +++++ + +L NVIAGA + +VA+ F R + P P+ Sbjct: 142 IGAEARL-VIVVWSAIFPLLINVIAGARNVDRHYLQVATVFCAPRLLTLRSVTFPATLPF 200 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G A G A +IV+E + + GLG + T + + ++++ Sbjct: 201 VLAGVRQAVGRALVGAIVAE------LFMGNAGLGYVVQTETSGFKMDDAMAAIVVIAVL 254 Query: 566 VLALNR 571 + L R Sbjct: 255 AIVLTR 260 >gi|324114593|gb|EGC08561.1| inner membrane transport system [Escherichia fergusonii B253] Length = 275 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M R+++ +I A +I IP G+ +G P I + P +L P + PL+V Sbjct: 83 SMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + L L IF + + +AG + A S + Y+ILPG P Sbjct: 143 -TPKVLLIWLAIFAP---LAMSALAGVQSVQQVRIRAAQSLGANRVQVLWYVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563 +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252 Query: 564 CFVL-----ALNRFL--WH 575 F+L AL R L WH Sbjct: 253 AFLLELSLRALQRRLTPWH 271 >gi|319790810|ref|YP_004152450.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315593273|gb|ADU34339.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 263 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 22/200 (11%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + T RM+ +++ LF V S + + P L+ ++ +P L + F Sbjct: 69 FTQATVGRMVEGWLLASLFGVVLGAAIGVSPAVRAWIQPTLEFIRPLPASALLPLAISIF 128 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 L PG V+ F + +W + + + L EV+R ++S W + Sbjct: 129 -GLNPGMVL-------FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAAYIWKM 180 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQDLLA 240 G+P +MP ++ M ++++ +A + VVG+ + G+G I A A + D Sbjct: 181 GLPNAMPDILAGMRLALT------IALIVAVVGEMIASQSGLGQAILLAARAFRASD--- 231 Query: 241 ILYAMLTMLGVI-FLYDQLL 259 L+A + +LG+I F+ + LL Sbjct: 232 -LFAGIVLLGLIGFVSNALL 250 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 10/158 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R+V ++AS+ + +G IG P + + IQP + + PA+ PL +S + Sbjct: 73 TVGRMVEGWLLASLFGVVLGAAIGVSPAVRAWIQPTLEFIRPLPASALLPL---AISIFG 129 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LNP + L ++ FG W +L + G +A EVA ++ + + LP P Sbjct: 130 LNPGMVL-FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAAYIWKMGLPNAMPD 188 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + G A +I VA G + +GLG I Sbjct: 189 ILAGMRLAL------TIALIVAVVGEMIASQSGLGQAI 220 >gi|323128141|gb|ADX25438.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 575 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS+L AK+ + V+ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISVLIGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|322412777|gb|EFY03685.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 575 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS+L AK+ + V+ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISVLIGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|319745717|gb|EFV98014.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Streptococcus agalactiae ATCC 13813] Length = 575 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS++ AKS ++ V+ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + +FA+ T + N+ ++ IP +L E S SF + QK + + +P + Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTAKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|25011877|ref|NP_736272.1| hypothetical protein gbs1838 [Streptococcus agalactiae NEM316] gi|77413910|ref|ZP_00790086.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|24413418|emb|CAD47497.1| Unknown [Streptococcus agalactiae NEM316] gi|77160043|gb|EAO71178.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] Length = 575 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS++ AKS ++ V+ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + +FA+ T + N+ ++ IP +L E S SF + QK + + +P + Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTAKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|160897817|ref|YP_001563399.1| nitrate ABC transporter inner membrane subunit [Delftia acidovorans SPH-1] gi|160363401|gb|ABX35014.1| nitrate ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 313 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP G IG +S P LL + P + + + Sbjct: 122 SLQRVAVGFGLAALVGIPAGFVIGRFNFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 179 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W +L N G P D+ VA +++ W+ I+ P + PY Sbjct: 180 ANPAAIWTIFIC--SIWPMLINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLPY 237 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 238 MLTGVRLAVGTAWLVIVAAEMLTGG 262 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 156 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMLINTAVGVQRV 207 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 208 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 262 >gi|302340537|ref|YP_003805743.1| binding-protein-dependent transporters inner membrane component [Spirochaeta smaragdinae DSM 11293] gi|301637722|gb|ADK83149.1| binding-protein-dependent transport systems inner membrane component [Spirochaeta smaragdinae DSM 11293] Length = 246 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 TM R V I++ S+I +P+G+ G I + P + LL P P+V+ + Sbjct: 55 TMLRAVTAIVVTSLIAVPLGVAAGRCRLIDRVLSPVSYLLYPIPKVALLPVVMLLFGLGN 114 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L L++ F ++ + A+ P+ + RY+I+P P Sbjct: 115 QAKVILLILVLFF----QMMLAIRDAAANIPDQYFTTIEVLGGGPLAKLRYVIIPAGLPR 170 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 YVT G A A SE + + GLG +I + + ++PE+ G++ M Sbjct: 171 YVTALRVGTGTALAALFFSETFATHY------GLGFFIMDCWMRINYPEMFAGIIAM 221 >gi|227822582|ref|YP_002826554.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] gi|227341583|gb|ACP25801.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 295 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RT + VIS++ ++S RL ++ P+LD+MQ++P +L V M Sbjct: 100 AMRTISMIFVCTVISIVVGLPIGIAMSRSDRLQRIVSPVLDVMQTMPSFVYLIPVV---M 156 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L G++ G I+A+ M + + RD+ E + +F S WQK + Sbjct: 157 LLGIGRIPGLIAVVIYALPP-----MIRLTDLGIRLVDRDVLEAADAFGCSKWQKLRNVE 211 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ VV + MI V G+G + AI Q ++ Sbjct: 212 LPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFN 264 Query: 245 MLTMLGVIFLYDQL 258 L ++G+ ++D++ Sbjct: 265 GLAIVGIAIIFDRV 278 >gi|220920372|ref|YP_002495673.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219944978|gb|ACL55370.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 257 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 12/187 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV ++A+++ +P+GI +G + + +PF PA+ F PL++ Sbjct: 66 VTVWRVVGGFLLAAVVAVPLGILMGAYKPVEAFFEPFVSFARYLPASAFVPLLILWAGIG 125 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+IF G+ + I+ V D E A + + R +++P Sbjct: 126 EMQ-----KLLVIFIGSVFQIVLMVAVSVGQVRRDLVEAAYTLGASDTGIIRRVLIPATA 180 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I ES + +++ G++++ Sbjct: 181 PDIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMIIESQALLATGQIIFGIIVIG 234 Query: 564 CFVLALN 570 LA + Sbjct: 235 LIGLASD 241 >gi|188989580|ref|YP_001901590.1| glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component [Xanthomonas campestris pv. campestris str. B100] gi|167731340|emb|CAP49515.1| glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component [Xanthomonas campestris pv. campestris] Length = 490 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 16/191 (8%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++L+ LAA+ RLG V++ + ++Q++P L F + F IGA+ Sbjct: 306 LALVMALPLGVLAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-P 357 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AI A+F + + + + L +IPR+L + + + L W + W + +P + +V + Sbjct: 358 AIAALFLYSLLPIVRNTHAGLTSIPRELRQTAEAIGLPAWTRLWRIELPLARRTIVAGIQ 417 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + V+ +G +I G G I I+ D+ IL + V+ L Q Sbjct: 418 TAA------VINVGTATLG-ALIGAGGYGQPILTGIRLDDIGLILEGAIPA-AVLALLVQ 469 Query: 258 LLFRPMIVWSN 268 LF + W+ Sbjct: 470 ALFEGLERWAT 480 >gi|76788447|ref|YP_330414.1| glycine betaine/proline ABC transporter permease/substrate-binding protein [Streptococcus agalactiae A909] gi|77406685|ref|ZP_00783726.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77412028|ref|ZP_00788356.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|76563504|gb|ABA46088.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptococcus agalactiae A909] gi|77161934|gb|EAO72917.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77174704|gb|EAO77532.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 575 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS++ AKS ++ V+ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + +FA+ T + N+ ++ IP +L E S SF + QK + + +P + Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTAKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|124266119|ref|YP_001020123.1| nitrate ABC transporter permease [Methylibium petroleiphilum PM1] gi|124258894|gb|ABM93888.1| nitrate ABC transporter, permease protein, putative [Methylibium petroleiphilum PM1] Length = 274 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 4/176 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+ A +I IP+G+ + + + P +LL P + P + + Sbjct: 76 LSLVRVLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAWVPASI----IF 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ + G + I+ NV+ GA + + + A + + W +R ++LP P Sbjct: 132 WPTAEMSIAFVTFLGAFFTIVINVVGGAKSIDVRYFQAAQAMGASQWDIFRRVVLPATLP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 V G+ G W + +E+ S G GLG +I S GS+ ++V+G++ Sbjct: 192 SIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYEQIVVGMI 247 >gi|332529362|ref|ZP_08405323.1| nitrate ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332041160|gb|EGI77525.1| nitrate ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 325 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 4/150 (2%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ IPVG IG +S P LL + P + Sbjct: 129 WNVLTSLQRVALGFGLAALVGIPVGFLIGRFEFLSRMCNPIISLLRPVSPLAWLP--IGL 186 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + NP ++ + + W ++ N G P D+ VA ++ W+ I+ P Sbjct: 187 LVFKGANPAAIWTIFIC--SIWPMVINTAVGVQRVPQDYLNVARVLQLSEWKVITKILFP 244 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530 + PY +TG A G AW + +E+ + G Sbjct: 245 AVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 274 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 168 PIISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 219 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 220 PQDYLNVARVLQLSEWKVITKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 274 >gi|319783050|ref|YP_004142526.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168938|gb|ADV12476.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 257 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 32/235 (13%) Query: 360 AWQSIGYIVNHFTYQDVLYVI------------WLGC-ITMFRVVVLIIIASIIWIPVGI 406 AW ++G VN D L ++ WL IT++RV ++AS++ +P+GI Sbjct: 28 AWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDVLITIWRVFGGFLLASVVAVPLGI 87 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYIL 465 +G + + ++PF PA+ F PL++ L LL+IF G+ + I+ Sbjct: 88 AMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELE-----KLLVIFVGSVFQIV 142 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 + D E A + T +I+P P G AW IV+E Sbjct: 143 LIIAVKVGGTRRDLVEAAYTLGSTNSGIVNRVIMPANAPEIAETLRLVLGWAWTYVIVAE 202 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL-------ALNRFL 573 + ++G+G I S + + +++ G++++ L A NR+L Sbjct: 203 LIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSDFAFKAFNRWL 251 >gi|77409771|ref|ZP_00786425.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77171620|gb|EAO74835.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 575 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS++ AKS ++ V+ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + +FA+ T + N+ ++ IP +L E S SF + QK + + +P + Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTAKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|283131336|dbj|BAI63341.1| glycine betaine-binding protein/glycine betaine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis] Length = 540 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS+L AK+ + V+ PILD MQ++P +L V +F G V Sbjct: 66 VLVASLISVLIGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 122 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 123 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 176 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 177 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 217 >gi|239932917|ref|ZP_04689870.1| transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291441267|ref|ZP_06580657.1| transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291344162|gb|EFE71118.1| transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 308 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 96/223 (43%), Gaps = 14/223 (6%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G + + + +L +W ++ R ++ ++A I P+G+ + + + + P Sbjct: 91 GEVTDAWRQGTLLDYVW---TSVSRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPVLSG 147 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ + P V + LN N + +++ G + ++AG P F Sbjct: 148 LQSLPSVAWVP---PAVLWLGLN-NSMMYAVILLGAVPSVANGLVAGIDQIPPLFLRAGR 203 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543 + TG R RY+++P P Y+ G +W + + +E +AS + + GLG + Sbjct: 204 TLGATGLRGARYVVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV---GLGQLL 260 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 S +V L + ++ +A++ ++ PL R LR Sbjct: 261 ENGRNNASIAQVFLAIFLILLVGIAIDLLIFSPLE---RRVLR 300 >gi|156933689|ref|YP_001437605.1| hypothetical protein ESA_01511 [Cronobacter sakazakii ATCC BAA-894] gi|156531943|gb|ABU76769.1| hypothetical protein ESA_01511 [Cronobacter sakazakii ATCC BAA-894] Length = 293 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LG + P++ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 132 LGRMFNPLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTA 183 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP D V+R +LS W + P +P ++ + +S+ W +VA+EM+ Sbjct: 184 EGVKRIPEDYLNVARVLQLSEWTVMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTG 243 Query: 216 G 216 G Sbjct: 244 G 244 Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP+G IG + P LL + P + + + Sbjct: 104 SLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLP--IGLLLFQK 161 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ W R I+ P + P Sbjct: 162 AEPAS--SWTIFICSIWPMVINTAEGVKRIPEDYLNVARVLQLSEWTVMRRILFPAVLPA 219 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 220 VLTGVRLSIGIAWLVIVAAEMLTGG 244 >gi|304397094|ref|ZP_07378973.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] gi|304355243|gb|EFM19611.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] Length = 263 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L +++++P L + +++F K+ L +F I+ + Y + NI R Sbjct: 101 LQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSGW F + +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFALGLMWL------TLIVAETISASS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D++ ILYA+L L + LL R + W ++L+ Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVAAL--LLERVWLRWHPAYQLKEENA 263 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++GW + +ILPG P + G A Sbjct: 130 LVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------- 566 G W IV+E S ++G+G Y+A + + +VV+ +I+ + Sbjct: 190 GLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADVAA 242 Query: 567 LALNR--FLWHPLY 578 L L R WHP Y Sbjct: 243 LLLERVWLRWHPAY 256 >gi|83310958|ref|YP_421222.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Magnetospirillum magneticum AMB-1] gi|82945799|dbj|BAE50663.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Magnetospirillum magneticum AMB-1] Length = 294 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 14/187 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R+ +A+I+ +P+GI +G + S + P ++L PA + P+ + Sbjct: 92 AMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYPVVEVLRPIPAIAWVPMSI----- 146 Query: 444 YHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 L P+ S++ I G+ + IL N + G +A + S +R++ LPG Sbjct: 147 -MLWPSNEESIVFITFLGSFFPILINTLHGVAAIDPALVRASRSLGAGEAALFRHVFLPG 205 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P+ TG G AW + I +E+ S G+G + E+ + ++VLG+L+ Sbjct: 206 ALPHIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYALVQYADIVLGMLL 259 Query: 562 MCCFVLA 568 + LA Sbjct: 260 IGVLGLA 266 >gi|302391229|ref|YP_003827049.1| binding-protein-dependent transport systems inner membrane component [Acetohalobium arabaticum DSM 5501] gi|302203306|gb|ADL11984.1| binding-protein-dependent transport systems inner membrane component [Acetohalobium arabaticum DSM 5501] Length = 287 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 16/153 (10%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T +++++V+ L+ L A+SR + ++ P+LD MQ+IP +L +++F Sbjct: 107 TMASIITSVVVCLILGIPIGILKARSRIIDLITRPMLDFMQTIPPFVYLIPALMFF---G 163 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G +FAI + +T Y + + +L+E R+F + WQ + + +P Sbjct: 164 LGNVSGVIATVVFAI--APPIRLT---YLGIKQVSDELKEAGRAFGCTPWQMLYKIELPL 218 Query: 188 SMPGLVWN----MMMSMSGGWFFVVASEMIVVG 216 ++P ++ +M+S+S VV + MI G Sbjct: 219 ALPSIMMGVNQCIMLSLS----MVVIAAMIGAG 247 >gi|254303281|ref|ZP_04970639.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323473|gb|EDK88723.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 260 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 16/143 (11%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149 +S+ LG + PI++ +Q +P + +L +++ +N P +I + +IF I Sbjct: 81 TRSKLLGDIFYPIIEFLQVVPPISWLILAILWLGLNGKPAILIVS--ISIFCI------- 131 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 MT S+ S+ NI + L EV+ F L+ ++K+ Y+ VP P +++ + G VV Sbjct: 132 MTISLVNSINNIDKKLLEVADVFHLTKFKKWKYIIVPSLYPAFETALIVCLGTGVKLVVM 191 Query: 210 SEMIVVGDTVIPLPGIGSYIALA 232 +E++ + GIG I A Sbjct: 192 AEVLTIDS------GIGGQITNA 208 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 6/66 (9%) Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 EVA FH+T ++ W+YII+P ++P + T I G +++EV + +G+G Sbjct: 149 EVADVFHLTKFKKWKYIIVPSLYPAFETALIVCLGTGVKLVVMAEVLT------IDSGIG 202 Query: 541 AYIAES 546 I + Sbjct: 203 GQITNA 208 >gi|222055586|ref|YP_002537948.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221564875|gb|ACM20847.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 276 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 88/180 (48%), Gaps = 21/180 (11%) Query: 95 RLGMVLVPILDI-MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RL L P++++ Q+ P++ L +++F+ + E+A IF I +W +TFS Sbjct: 97 RLQQALEPLMELFAQANPVI--LAHIIIFFLGI-------GEVAKIFTICWLCIWPITFS 147 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + ++ L + +RS L WQ F ++ +P S P + ++ + ++ASEM+ Sbjct: 148 TIAGIRDVDPQLMKAARSLGLGRWQLFLHVALPASAPSFFTGLRLAAGYAFLMLIASEMM 207 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM----IVWSNK 269 + G+G ++ + +E + ++A T++ + + LL + + +VW++ Sbjct: 208 GASN------GLG-WLVMQSQENYHIQRIFAGATIITALAVLTDLLLKVLEKRTLVWTDN 260 >gi|260221748|emb|CBA30622.1| Nitrate transport permease protein nrtB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 287 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 HSL +R L L A V+++ FV S L L P + I++ I L ++ Sbjct: 98 HSL----ARVGLGFLLACVVAIPLGFVIGM----SPLLHKALDPFIQILKPISPLAWMPL 149 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 + + + + IF IF VW M + + ++ R+ V+R+ + + Sbjct: 150 ALYTIKD--------SSASGIFVIFICSVWPMLINTAFGVASVKREWLNVARTLEVKPLR 201 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + P ++ M +SM W +VA+EM+V G GIG ++ L Sbjct: 202 KAFQVILPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSL 255 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVW 266 +L+A + ++GV+ + L+F + W Sbjct: 256 TNVLFA-IGVIGVMGMLLDLVFARLQKW 282 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + ++A ++ IP+G IG P + + PF Q+L + PL + Y Sbjct: 99 SLARVGLGFLLACVVAIPLGFVIGMSPLLHKALDPFIQILKPISPLAWMPLAL-----YT 153 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + +IF + W +L N G ++ ++ VA + + R +ILP P Sbjct: 154 IKDSSASGIFVIFICSVWPMLINTAFGVASVKREWLNVARTLEVKPLRKAFQVILPAAAP 213 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +TG + G AW + +E+ G TG+G ++ Sbjct: 214 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFV 246 >gi|296116706|ref|ZP_06835316.1| nitrate/sulfonate/bicarbonate transporter permease protein [Gluconacetobacter hansenii ATCC 23769] gi|295976918|gb|EFG83686.1| nitrate/sulfonate/bicarbonate transporter permease protein [Gluconacetobacter hansenii ATCC 23769] Length = 254 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 26/198 (13%) Query: 63 QYASRTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 Q A R +L L +VI + + L L +L ++ +++ IP L ++ F ++ Sbjct: 59 QTAIRDSLTHYLLGLVIGTVLGALVGLLCGAVGALDALLAGVVRVLRPIPGLAWVPFAIL 118 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ-KF 180 +F G A F I S W ++ Y ++ +I DL EV+ +F G+ + Sbjct: 119 WFGLNTAG--------ATFVIAISVFWINFYAAYGAVQSIDPDLYEVAAAFGHGGFAGRL 170 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDL 238 + +P S PGL+ + + W VVA+E+ V PGIG+ + A ++ DL Sbjct: 171 MKVVLPASAPGLLAGLRTGLGQAWMSVVAAELFGV-------PGIGARMMQASSLLATDL 223 Query: 239 -------LAILYAMLTML 249 +A+LYA+ ML Sbjct: 224 VVVYMLTMALLYALTDML 241 >gi|223937679|ref|ZP_03629581.1| nitrate ABC transporter, inner membrane subunit [bacterium Ellin514] gi|223893651|gb|EEF60110.1| nitrate ABC transporter, inner membrane subunit [bacterium Ellin514] Length = 261 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 67/137 (48%), Gaps = 9/137 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S+ + PI+ +++ + L +L ++ F++ GK +EL A+F I +W Sbjct: 94 SKTFTKIFDPIIQVLRPVSPLAWLPLGLILFLSF--GKQ-ASELGALFTIAICAMWPTVM 150 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + IP+D V+R +LS + + + +P ++P + +S+ W +VA+EM Sbjct: 151 NTAVGVRAIPQDYLNVARVLKLSRSKTLFKVLIPATLPYMFTGFRLSLGIAWLVIVAAEM 210 Query: 213 IVVGDTVIPLPGIGSYI 229 + PG+G ++ Sbjct: 211 LT------GRPGVGGFL 221 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 16/220 (7%) Query: 361 WQSIG-YIVNHFTY-----QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 WQS YI+ F Q +L W + + + VL A + P+G +G Sbjct: 41 WQSSKPYIMEPFAKRGEMDQGILRFTWYSLVLVAKGYVL---ALALGTPIGFCLGLSKTF 97 Query: 415 SSKIQPFAQLLAAFPANVFFPL-VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + P Q+L + PL ++ +S+ L + W + N G Sbjct: 98 TKIFDPIIQVLRPVSPLAWLPLGLILFLSFGKQASELGALFTIAICAMWPTVMNTAVGVR 157 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 A P D+ VA ++ + +++P PY TG + G AW + +E+ + Sbjct: 158 AIPQDYLNVARVLKLSRSKTLFKVLIPATLPYMFTGFRLSLGIAWLVIVAAEMLT----- 212 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G ++ + + ++L ++++ L+R + Sbjct: 213 -GRPGVGGFLWQEYNALIYEHIILCIIVIGLVGFVLDRLM 251 >gi|126729376|ref|ZP_01745190.1| binding-protein-dependent transport systems inner membrane component [Sagittula stellata E-37] gi|126710366|gb|EBA09418.1| binding-protein-dependent transport systems inner membrane component [Sagittula stellata E-37] Length = 360 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 18/201 (8%) Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 IW T+F VL A+++ +P+GI G P ++ I P Q+ + P+V Sbjct: 153 IWTSIQTVFFGFVL---ATLVAVPLGILAGLSPTANAAINPLVQIFKPVSPLAWLPIVTM 209 Query: 440 CVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 VS N + ++ + + W L N G ++ D V+ + W Sbjct: 210 IVSAAAANDGGLFAKSFIISAVTVTLCSLWPTLINTSLGVASIDKDLVNVSKVLKMNTWT 269 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++LP P TG + G W I +E+ + + GLG ++ + + GS Sbjct: 270 KITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSS 323 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 L +++ F + + FL Sbjct: 324 SS--LAKIMVAVFTIGIIGFL 342 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL VS+ +++ W K L +P ++P + + +S+ GW Sbjct: 238 LWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMV 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + L I+ A+ T+ + FL D++++ Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMY 348 >gi|170742628|ref|YP_001771283.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168196902|gb|ACA18849.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 277 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV I + +PVG+ +G + + P Q+L P + PL + ++ Sbjct: 84 SLGRVVAGFAIGVGLALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPL---AIVWFG 140 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L N L+ GT + +L N IAG + + A + W +R +ILP P+ Sbjct: 141 LG-NPPALFLIALGTFFPVLVNTIAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAASPF 199 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + G G A+ IV+E+ + + GLG I E+ E Sbjct: 200 VLAGMRIGIGTAFIVVIVAEMIAV------SDGLGYRILEARE 236 >gi|332529936|ref|ZP_08405887.1| nitrate ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332040633|gb|EGI77008.1| nitrate ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 305 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 13/212 (6%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW+ + D I LG ++ RV + ++A ++ +P+G IG P + + Sbjct: 92 AWKHLSNPFYDNGPNDKGIAIQLGH-SLARVGLGFLLACLVAVPLGFVIGMSPLLRRALD 150 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPND 478 P+ Q+L + PL + Y + + + +IF + W +L N G +A D Sbjct: 151 PYIQVLKPISPLAWMPL-----ALYTIKDSSASGIFVIFICSVWPMLINTAFGVAAVRRD 205 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 + VA++ ++ R +ILP P VTG + G AW + +E+ G TG Sbjct: 206 WLNVAATLEVSPLRKAFLVILPAAAPTIVTGMRISMGIAWLVIVAAEMLVGG------TG 259 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 +G ++ S V+ + ++ + L+ Sbjct: 260 IGYFVWNEWNNLSLSNVIFAITVIGVVGMLLD 291 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 23/202 (11%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 HSL +R L L A ++++ FV S L L P + +++ I L ++ Sbjct: 116 HSL----ARVGLGFLLACLVAVPLGFVIGM----SPLLRRALDPYIQVLKPISPLAWMPL 167 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 + + + + IF IF VW M + + + RD V+ + +S + Sbjct: 168 ALYTIKD--------SSASGIFVIFICSVWPMLINTAFGVAAVRRDWLNVAATLEVSPLR 219 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + P +V M +SM W +VA+EM+V G GIG ++ L Sbjct: 220 KAFLVILPAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSL 273 Query: 239 LAILYAMLTMLGVIFLYDQLLF 260 +++A +T++GV+ + LLF Sbjct: 274 SNVIFA-ITVIGVVGMLLDLLF 294 >gi|257899649|ref|ZP_05679302.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium Com15] gi|257837561|gb|EEV62635.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium Com15] Length = 575 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + +++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQIIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|74310937|ref|YP_309356.1| taurine transporter subunit [Shigella sonnei Ss046] gi|73854414|gb|AAZ87121.1| taurine transport system permease protein [Shigella sonnei Ss046] gi|323164155|gb|EFZ49962.1| taurine transport system permease protein tauC [Shigella sonnei 53G] Length = 275 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + +V+AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSVLAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|116249179|ref|YP_765020.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253829|emb|CAK12224.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 295 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 15/192 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT + V+S+ L A+S RL ++ PILD+MQ++P +L V M L Sbjct: 102 RTVSMIFVCTVLSIAIGIPMGILMARSDRLQRIINPILDVMQTMPSFVYLIPVV---MLL 158 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV G I+AI M + + +D+ E + +F S QK + + +P Sbjct: 159 GIGKVPGLIAVVIYAI-----PPMIRLTDLGIRLVDKDVLEAADAFGTSSSQKLFKVQLP 213 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++P ++ + ++ VV + MI V G+G + AI Q ++ L Sbjct: 214 LALPTIMAGINQTIMMALAMVVVASMIGV-------QGLGQPVLKAIANQYFTLGIFNGL 266 Query: 247 TMLGVIFLYDQL 258 ++G+ ++D++ Sbjct: 267 AIVGIAIIFDRV 278 >gi|218437070|ref|YP_002375399.1| binding-protein-dependent transporters inner membrane component [Cyanothece sp. PCC 7424] gi|218169798|gb|ACK68531.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7424] Length = 275 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++FRV+ + +I+ IP+GI +G I + +P ++ PA F PL+ + Y Sbjct: 84 ISVFRVLSGFFLGAILSIPLGISMGAFASIRALFEPIIGVIRYMPAPAFTPLL---LIYL 140 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ ++L+ + GT ++ ++ P + EV+ + W+ R +I P I P Sbjct: 141 GIDEPSKIALIFL-GTVFFNTLMIMDSVKFIPKELIEVSYTLGGNRWQVLRQVISPFIVP 199 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + AWN +V+E+ + TGLG I Sbjct: 200 KIIDTFRINMAAAWNLVVVAELVA------AETGLGKRI 232 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 15/160 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ +P F ++Y P K I IF V+ T + S+ I Sbjct: 119 PIIGVIRYMPAPAFTPLLLIYLGIDEPSK--------IALIFLGTVFFNTLMIMDSVKFI 170 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P++L EVS + + WQ + PF +P ++ ++M+ W VV +E+ V +T Sbjct: 171 PKELIEVSYTLGGNRWQVLRQVISPFIVPKIIDTFRINMAAAWNLVVVAEL-VAAET--- 226 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G I LA K I +A L +LG+I L FR Sbjct: 227 --GLGKRILLAQKFLKTDEI-FACLIVLGMIGFAIDLSFR 263 >gi|221370082|ref|YP_002521178.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] gi|221163134|gb|ACM04105.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] Length = 276 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 11/189 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++++R++ + +A ++ +G+ IG + +P + P + P+++ Sbjct: 78 ALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISAIMPIPTLAWTPILLLV--- 134 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ ++++ I + I++NV+ G VA+S + + RY+I+PGI Sbjct: 135 FGIDNRTTITVVFI-AASFEIIYNVVTGIEMMTRKTYWVAASMGASRIQTLRYVIIPGIL 193 Query: 504 PYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 PY +TG G AW A I +E +A+ H GLG I ++ E + G+L + Sbjct: 194 PYLITGLKLGVGYAWRALIAAEMLAASSH------GLGFMIYDAQEYMDMKSIYGGILTI 247 Query: 563 CCFVLALNR 571 L + R Sbjct: 248 SVLGLLIER 256 >gi|254490864|ref|ZP_05104047.1| ABC transporter, permease protein [Methylophaga thiooxidans DMS010] gi|224464036|gb|EEF80302.1| ABC transporter, permease protein [Methylophaga thiooxydans DMS010] Length = 340 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 13/164 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449 ++AS+I IP+GI G + S I P Q+ + P+V VS +++ N Sbjct: 142 LLASVIAIPIGIVAGLSNTLYSAINPLIQIFKPVSPLAWLPIVTMVVSALYVSDNPLFAK 201 Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + ++ ++ + W L N G S+ D VA + +++P P Sbjct: 202 SFVTSAITVMLCSLWPTLINTAVGVSSIDKDLINVARVLRLNYLTTIYKVVIPASIPMIF 261 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 TG + G W I +E+ + + GLG ++ + + GS Sbjct: 262 TGLRISLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGS 299 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 16/125 (12%) Query: 144 TSQVWNMTFSMYQSLCN-------IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 TS + M S++ +L N I +DL V+R RL+ + + +P S+P + + Sbjct: 205 TSAITVMLCSLWPTLINTAVGVSSIDKDLINVARVLRLNYLTTIYKVVIPASIPMIFTGL 264 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIF 253 +S+ GW ++A+EM+ PG+G ++ + + L I+ A+LT+ V F Sbjct: 265 RISLGIGWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSESLSRIMVAVLTIGIVGF 318 Query: 254 LYDQL 258 + D++ Sbjct: 319 ILDRI 323 >gi|126641490|ref|YP_001084474.1| ABC taurine transporter permease subunit [Acinetobacter baumannii ATCC 17978] Length = 204 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 12 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 71 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + ++ILP P+ Sbjct: 72 TTK----VLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 127 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + SE+ + G+G + + + V+LG++++ Sbjct: 128 IITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 181 Query: 566 VLALNRFL 573 ++ FL Sbjct: 182 AVSFELFL 189 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 43 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSTHGV 94 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VASE++ Sbjct: 95 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVASELV 149 >gi|28869973|ref|NP_792592.1| ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853218|gb|AAO56287.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 282 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 16/170 (9%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS +I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ KV+ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 EV + + S ++ + +P ++PGL + MS W F+VA+E+I Sbjct: 174 VEVGQMYGFSRYRLTQRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAA 223 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R + I+ Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTQRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + AW + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|330961000|gb|EGH61260.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 282 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 25/235 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS +I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKIVMIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + S ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAATK------GL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 G ++ + +L A++ + + L D LL + + W + F + G Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDTFNGQSREG 282 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + ++ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKIVMIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + AW + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|184158076|ref|YP_001846415.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acinetobacter baumannii ACICU] gi|332874536|ref|ZP_08442439.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] gi|183209670|gb|ACC57068.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii ACICU] gi|332737380|gb|EGJ68304.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] Length = 284 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/239 (17%), Positives = 102/239 (42%), Gaps = 18/239 (7%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +N+ P D++ + + + ++ + R++ V++ L LA Sbjct: 55 VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 114 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + ++L L+P L++++ IP + ++ ++ F + +E + IF F ++ + Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 166 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S S + +P ++P ++ + + M WF +V +E Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 MI GIG + + Q+ I+ M+ ++G + ++ L R V N+F Sbjct: 227 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275 >gi|56807484|ref|ZP_00365427.1| COG2113: ABC-type proline/glycine betaine transport systems, periplasmic components [Streptococcus pyogenes M49 591] Length = 452 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 22 VLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 78 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 79 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 132 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 133 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 173 >gi|195977325|ref|YP_002122569.1| glycine betaine transport system permease protein OpuAB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974030|gb|ACG61556.1| glycine betaine transport system permease protein OpuAB [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 576 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS+L AKS+ + V+ P+LD+MQ++P +L V +F G V Sbjct: 101 VLVASLISVLLGIPLGIWMAKSKTVHQVINPMLDLMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + IFA+ T + N+ ++ +IP +L E S +F + QK + +P + Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRHIPTELVEASDAFGSTPKQKLLKVELPLAKH 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|218529302|ref|YP_002420118.1| nitrate ABC transporter inner membrane subunit [Methylobacterium chloromethanicum CM4] gi|218521605|gb|ACK82190.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium chloromethanicum CM4] Length = 279 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A ++ IPVG IG P +S + P+ Q+L + PL + + Sbjct: 91 SIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALYTIKDSS 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ ++ +IF + W +L N + G + ++ VA + ++ R +ILP P Sbjct: 151 LS-----AIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G + S V+ +L++ Sbjct: 206 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYFAWNEWNNLSITNVITSILVIGL 259 Query: 565 FVLALNRFL 573 + L++ L Sbjct: 260 VGMVLDQLL 268 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + L+AIF IF +W M + + ++ V+R+ +S ++ + + +P + P ++ Sbjct: 149 SSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVILPAAAPTIL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG + + ++ ++L + V Sbjct: 209 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFAWNEWNNLSITNVITSILVIGLVGM 262 Query: 254 LYDQLLFR 261 + DQLL R Sbjct: 263 VLDQLLAR 270 >gi|226309964|ref|YP_002769858.1| glycine betaine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226092912|dbj|BAH41354.1| probable glycine betaine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 279 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 96/191 (50%), Gaps = 23/191 (12%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+A +IS+ L A+ ++ PILD+MQ++P +L ++F L G+V Sbjct: 97 VLTATMISIAIGIPVGILCARHDTFRNLVTPILDLMQTMPAFVYL-IPAIFFFGL--GEV 153 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ + +T + +P ++EE + +F +GWQK + +P++ Sbjct: 154 PGVIASVIFAL--PPIVRLT---NLGIRQVPAEMEEAADAFGATGWQKLVKVQLPYAKST 208 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + G+ +M+++S M+V+ +I G+G+ + A+ + D+ A L+ Sbjct: 209 ILAGVNQCIMLALS----------MVVIA-AMIGAKGLGADVYRAVSQVDIGRGFEAGLS 257 Query: 248 MLGVIFLYDQL 258 ++ + + D+L Sbjct: 258 IVIIAIVLDRL 268 >gi|121604319|ref|YP_981648.1| nitrate ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593288|gb|ABM36727.1| nitrate ABC transporter, inner membrane subunit [Polaromonas naphthalenivorans CJ2] Length = 311 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+I+ IPVG IG +S+ P L+ + P + + + Sbjct: 120 SLKRVAMGFGLAAIVGIPVGFMIGRFSFLSNMFNPLISLMRPVSPLAWLP--IGLLVFKG 177 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +P ++ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 178 ADPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILFPSVLPY 235 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 236 MLTGVRLAVGTAWLVIVAAEMLTGG 260 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +M+ + L +L ++ F GA+ AAI+ IF +W M + + + Sbjct: 154 PLISLMRPVSPLAWLPIGLLVFK--------GADPAAIWTIFICSIWPMIINTAVGVQRV 205 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 206 PQDYMNVARVLNLSEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 260 >gi|150390569|ref|YP_001320618.1| binding-protein-dependent transport systems inner membrane component [Alkaliphilus metalliredigens QYMF] gi|149950431|gb|ABR48959.1| binding-protein-dependent transport systems inner membrane component [Alkaliphilus metalliredigens QYMF] Length = 287 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 19/155 (12%) Query: 68 TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +TL M L++ VIS++ L AK++ + +++PI+D+MQ++P +L V +F Sbjct: 100 STLSMVLTSTVISIMLGIPIGILIAKNQIMNRIIMPIMDLMQTMPAFVYLIPAVSFF--- 156 Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GKV G IF+I ++ N+ + +P +L E + +F +G QK + Sbjct: 157 RMGKVPGIFATVIFSIAPCIRLTNL------GIRQVPEELIEAADAFGSTGAQKLMKVQF 210 Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P + M G+ +M+S+S VV S MI G Sbjct: 211 PLALSTIMAGVNQTIMLSLS----MVVISAMIGAG 241 >gi|15674389|ref|NP_268563.1| putative glycine-betaine binding permease [Streptococcus pyogenes M1 GAS] gi|13621479|gb|AAK33284.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes M1 GAS] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|325000348|ref|ZP_08121460.1| binding-protein-dependent transport systems inner membrane component [Pseudonocardia sp. P1] Length = 281 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 100/205 (48%), Gaps = 21/205 (10%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+++ + I ++ V ATL+ RR V+ + +++++P++G + +++F K Sbjct: 90 RVVAGIAIGVVTAVVLATLSGLFRRGEDVIDAPVQMLRTVPVIGLIPLLIIWFGIGEEPK 149 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ LA F ++ +++ + N+ L E +R+ L + + ++ +P +MP Sbjct: 150 IVLIGLAVTFPLY--------MNLFGGIRNVDATLVEAARTLGLGWFGQVRHVILPSAMP 201 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLA---ILYAM 245 + + S+ W +V G+T+ GIG + A + E D++ +LYA+ Sbjct: 202 QFLVGLRYSLGTAWL------ALVFGETINATSGIGYEMNRAREFFETDVIVVCLVLYAL 255 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKF 270 L ++G + +LL R ++ W F Sbjct: 256 LGLVGDGIV--RLLERGLLSWRPAF 278 >gi|300871643|ref|YP_003786516.1| hypothetical protein BP951000_2037 [Brachyspira pilosicoli 95/1000] gi|300689344|gb|ADK32015.1| hypothetical protein BP951000_2037 [Brachyspira pilosicoli 95/1000] Length = 249 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 17/206 (8%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 ++ +T Q++L IT+ RV +IA II +P+G+ +G+ I + P + Sbjct: 44 IDSYTVQNLL-------ITLERVFRGFLIACIIGLPLGLIMGYSKPILLAVSPIINSIRQ 96 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P + PL + P ++ L+ + ++ N I G ++ A S Sbjct: 97 VPIMAWIPLAIVWFGLGD-GPTIF---LITMSAIFPLIINTIDGVRGIDPNYINAARSMG 152 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 IILPG P ++TG A G W + I +E + + G G + E+ Sbjct: 153 AKNIDIMLDIILPGALPSFLTGCRLALGLGWMSVICAEFIA------TSKGFGFILVEAQ 206 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ P++ +++ +++R L Sbjct: 207 QRLETPKLYALMIVSALIGFSMDRIL 232 >gi|302557820|ref|ZP_07310162.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000] gi|302475438|gb|EFL38531.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000] Length = 296 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 11/202 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R ++ + A I P+G+ + P + + + P L + P+ + P + + ++ Sbjct: 100 SLERGLLGFLAALAIGTPLGLVVARVPVVRATLSPVLSGLQSLPSVAWVP---AAIIWFG 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L + + +++ G I +++G P + + TG R RYI+LP P Sbjct: 157 LT-DTAMYTVILLGAVPSIAVGLVSGIDQVPPLYLRAGRTIGATGLRGARYIVLPAALPG 215 Query: 506 YVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y G +W + + +E +AS + + GLG Y+A S E P V G+L++ Sbjct: 216 YTAGLKQGWAFSWRSLMATELIASSPDLGV---GLGRYLANSREAIDLPGVFFGILLILA 272 Query: 565 FVLALNRFLWHPLYLYGTRCLR 586 + ++ ++ PL R LR Sbjct: 273 VGVLIDLLVFSPLE---RRVLR 291 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 19/182 (10%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA-IFTSQVWNMTFSMYQS 157 L P+L +QS+P + ++ +++F G A++ I V ++ + Sbjct: 131 TLSPVLSGLQSLPSVAWVPAAIIWF---------GLTDTAMYTVILLGAVPSIAVGLVSG 181 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG- 216 + +P R+ +G + Y+ +P ++PG + + W ++A+E+I Sbjct: 182 IDQVPPLYLRAGRTIGATGLRGARYIVLPAALPGYTAGLKQGWAFSWRSLMATELIASSP 241 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 D + G+G Y+A + + DL + + +L +L V L D L+F P+ + R+ R+ Sbjct: 242 DLGV---GLGRYLANSREAIDLPGVFFGILLILAVGVLIDLLVFSPL-----ERRVLRSR 293 Query: 277 GI 278 G+ Sbjct: 294 GL 295 >gi|255016499|ref|ZP_05288625.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_1_7] Length = 277 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ +I+L+ A+S R ++ P+LD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P D+ E +RSF + Q + + +P Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPADIVEATRSFGATSTQLLYKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 ++P G+ +M+S+S VV + MI G Sbjct: 199 LALPTIMTGVNQTIMLSLS----MVVIAAMISAG 228 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 18/186 (9%) Query: 337 NQRVSYMLDIF--------WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383 N V +D F ++ ++ G+A+ +AW G V FT +L + +G Sbjct: 27 NDGVGGFIDTFQDGLTWIPFYVMILGLAL-LAWFKAGKGVGVFTALGLLLIYGMGFWVET 85 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 T+ V+ IIA +I +P+GIW I P L+ PA V+ + V + Sbjct: 86 MQTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYL---IPAVLF 142 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L P +IF + + G P D E SF T + + LP Sbjct: 143 FGLGPVPGAFATVIFAMPPVVRLTDL-GIRQVPADIVEATRSFGATSTQLLYKVQLPLAL 201 Query: 504 PYYVTG 509 P +TG Sbjct: 202 PTIMTG 207 >gi|157369979|ref|YP_001477968.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] gi|157321743|gb|ABV40840.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] Length = 264 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 23/181 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI R Sbjct: 101 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+Q F + +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLLEMARSYGLSGFQLFAQVVLPGALPSIMVGVRFALGFMWL------TLIVAETISANS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D++ +LYA+L L + QLL R + W ++L++ Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIVLYALLGKLADV--SAQLLERVWLRWHPAYQLKQGEA 263 Query: 278 I 278 + Sbjct: 264 L 264 >gi|91786202|ref|YP_547154.1| nitrate transport permease [Polaromonas sp. JS666] gi|91695427|gb|ABE42256.1| nitrate transport permease [Polaromonas sp. JS666] Length = 287 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 13/203 (6%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W+ + + D +I LG ++ RV + ++A + +P+G IG P + P Sbjct: 75 WKQVSNPLYDNGPNDKGILIQLGH-SLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDP 133 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDF 479 F Q+L + PL + + ++ + +IF + W +L N G SA ++ Sbjct: 134 FIQVLKPISPLAWMPLALYTIKDSSIS-----GIFVIFICSVWPMLINTAFGVSAVKREW 188 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VAS+ ++ R +ILP P TG + G AW + +E+ G TG+ Sbjct: 189 LNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGG------TGI 242 Query: 540 GAYIAESTEKGSFPEVVLGVLIM 562 G ++ S V+ +L++ Sbjct: 243 GYFVWNEWNNLSLTNVIFAILVI 265 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + ++ IF IF VW M + + + R+ V+ + +S +K + + +P + P + Sbjct: 157 SSISGIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIF 216 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +SM W +VA+EM+V G GIG ++ L +++A+L + V Sbjct: 217 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVIFAILVIGIVGM 270 Query: 254 LYD 256 L D Sbjct: 271 LLD 273 >gi|327393356|dbj|BAK10778.1| ABC-type sulfonate transport system, permease component SsuC [Pantoea ananatis AJ13355] Length = 279 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 24/192 (12%) Query: 93 SRRLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + RLG L+ L +++++P L + +++F K+ L +F I+ Sbjct: 105 TSRLGERLLDTSLQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY-------- 156 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + Y + N+ R L E++RS+ LSGW F + +P ++P ++ + ++ W Sbjct: 157 LNTYHGIRNVDRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWL------ 210 Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIV 265 ++V +T+ GIG Y+A+ +E D++ ILYA+L L + LL R + Sbjct: 211 TLIVAETISANAGIG-YLAMNAREFLQTDVVMVAIILYALLGKLADVSAL--LLERVWLR 267 Query: 266 WSNKFRLERTTG 277 W ++ + T Sbjct: 268 WHPAYQRQEKTA 279 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 21/166 (12%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q+L P PLV+ ++ ++ + + L+ GT + I N G E+ Sbjct: 118 QMLRNVPHLALIPLVIL---WFGIDESAKI-FLVALGTLFPIYLNTYHGIRNVDRGLVEM 173 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ ++GW + +ILPG P + G A G W IV+E S G+G Y Sbjct: 174 ARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWLTLIVAETIS------ANAGIG-Y 226 Query: 543 IAESTEKGSFPEVVLGVLIMCCFV--------LALNR--FLWHPLY 578 +A + + +VV+ +I+ + L L R WHP Y Sbjct: 227 LAMNAREFLQTDVVMVAIILYALLGKLADVSALLLERVWLRWHPAY 272 >gi|306846035|ref|ZP_07478601.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO1] gi|306273524|gb|EFM55375.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO1] Length = 295 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 17/197 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q A RT + V+S++ L A+S RL ++ PILD+MQ++P +L V Sbjct: 98 QDAMRTISMIFVCTVLSIIIGLPIGILMARSERLQRIINPILDVMQTMPSFVYLIPVV-- 155 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L G+V G I+AI ++ N+ + + +D+ E + +F S QK + Sbjct: 156 -MLLGIGRVPGLIAVVIYAIPPIIRLTNLGIRL------VDKDVLEAADAFGSSNIQKLF 208 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P ++ + ++ VV + MI V G+G + AI Q Sbjct: 209 KVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLG 261 Query: 242 LYAMLTMLGVIFLYDQL 258 ++ L ++G+ ++D++ Sbjct: 262 IFNGLAIVGIAIIFDRV 278 >gi|291299833|ref|YP_003511111.1| binding-protein-dependent transporter inner membrane component [Stackebrandtia nassauensis DSM 44728] gi|290569053|gb|ADD42018.1| binding-protein-dependent transport systems inner membrane component [Stackebrandtia nassauensis DSM 44728] Length = 261 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 22/181 (12%) Query: 107 MQSIPILGFLTFTVVYFMNLYPGKV----------IGAELAAIFAIFTSQVWNMTFSMYQ 156 + S+P L T + + F+ P G E + ++ S W + + Sbjct: 86 IASVPGLRAATASTIEFLRPIPSVALIPLAILLLGTGIESTLLLVVYAS-FWQVLIQVIA 144 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + +I + +RSFRLS ++ W+L +P ++P ++ + ++ S V +E+ Sbjct: 145 GINDIDSVAADTARSFRLSAARRVWHLALPSALPYILTGVRLAASVALVLAVTAEL---- 200 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV----IFLYDQLLFRPMIVWSNKFRL 272 VI PG+G I++A K + +YA++ + G+ + L + R ++ W R Sbjct: 201 --VIGAPGLGHEISVA-KTSAAVPRMYALIAVTGILGVAVNLAARGAERRLLRWHPSIRQ 257 Query: 273 E 273 E Sbjct: 258 E 258 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 15/132 (11%) Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 LL+++ + W +L VIAG + + + A SF ++ R ++ LP PY +TG A Sbjct: 128 LLVVYASFWQVLIQVIAGINDIDSVAADTARSFRLSAARRVWHLALPSALPYILTGVRLA 187 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCF 565 A ++ +E+ + GLG I+ + + P + +LGV + Sbjct: 188 ASVALVLAVTAELV------IGAPGLGHEISVAKTSAAVPRMYALIAVTGILGVAVNLAA 241 Query: 566 VLALNRFL-WHP 576 A R L WHP Sbjct: 242 RGAERRLLRWHP 253 >gi|311693904|gb|ADP96777.1| nitrate transport system permease protein [marine bacterium HP15] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 7/119 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ +AIF IF +W M + + N+ +D V+R+ L + + +P + P ++ Sbjct: 145 SDASAIFVIFICSIWPMLLNTAFGVANVRQDWVNVARTHELGPLRTAITVILPAAAPTIL 204 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 M +S+ W +VA+EM+V G GIG Y+ DL ++++++L M+GV+ Sbjct: 205 TGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLASVIFSIL-MIGVV 256 Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ + A I +PVG IG P + + P+ Q+L + PL + + Sbjct: 87 SVYRVLTGYLAAMAIALPVGFLIGMSPLMYKALNPYIQVLRPISPLAWMPLALFIIQDSD 146 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G + D+ VA + + R +ILP P Sbjct: 147 AS-----AIFVIFICSIWPMLLNTAFGVANVRQDWVNVARTHELGPLRTAITVILPAAAP 201 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +TG + G AW + +E+ G TG+G Y+ Sbjct: 202 TILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYV 234 >gi|209558734|ref|YP_002285206.1| L-proline Glycine Betaine ABC transport system permease protein proW [Streptococcus pyogenes NZ131] gi|209539935|gb|ACI60511.1| L-proline Glycine Betaine ABC transport system permease protein proW [Streptococcus pyogenes NZ131] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|206577481|ref|YP_002239418.1| aliphatic sulfonates ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288936268|ref|YP_003440327.1| binding-protein-dependent transporters inner membrane component [Klebsiella variicola At-22] gi|290510676|ref|ZP_06550046.1| aliphatic sulfonates transport permease ssuC [Klebsiella sp. 1_1_55] gi|206566539|gb|ACI08315.1| aliphatic sulfonates ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288890977|gb|ADC59295.1| binding-protein-dependent transport systems inner membrane component [Klebsiella variicola At-22] gi|289777392|gb|EFD85390.1| aliphatic sulfonates transport permease ssuC [Klebsiella sp. 1_1_55] Length = 263 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 23/220 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I V ++ SR +L + +++++P L + +++ Sbjct: 60 QHLAISSWRALVGFAIGGSIGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + + + NI R L E++RS+ LSG+ F + Sbjct: 120 FGIDETAKIFLVSLGTLFPIY--------INTWHGIRNIDRGLVEMARSYGLSGFALFRH 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VILPGALPSIMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 ILYA+L L + QLL R + W+ + L+ Sbjct: 225 VVAIILYAILGKLADV--CAQLLERLWLRWNPAYHLQEAN 262 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 21/205 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R +V I I + +G+ G + Q+L P PLV+ + Sbjct: 63 AISSWRALVGFAIGGSIGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + L+ GT + I N G E+A S+ ++G+ +R++ILPG Sbjct: 120 FGIDETAKI-FLVSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV------- 556 P + G A G W IV+E S G+G Y+A + + +VV Sbjct: 179 PSIMVGVRFALGLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTDVVVVAIILY 231 Query: 557 --LGVLIMCCFVLALNRFL-WHPLY 578 LG L C L +L W+P Y Sbjct: 232 AILGKLADVCAQLLERLWLRWNPAY 256 >gi|28211936|ref|NP_782880.1| putative glycine-betaine binding permease protein [Clostridium tetani E88] gi|28204379|gb|AAO36817.1| putative glycine-betaine binding permease protein [Clostridium tetani E88] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 10/151 (6%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +L + +I+LL + ++A++ + +L PILD MQ++P +L V++F Sbjct: 90 QTLALVLVSALIALLIGVPFGIMSARNEKANKILRPILDFMQTMPAFVYLIPAVLFFGM- 148 Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GKV GA IF++ + ++ N+ + +P ++ E ++SF + Q + + + Sbjct: 149 --GKVPGAIATVIFSMPPAVRLTNL------GIRQVPDEVVEAAKSFGSTPKQMLYKVQL 200 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P ++P ++ + ++ VV S MI G Sbjct: 201 PIALPTILAGVNQTIMLALSMVVVSAMIGAG 231 >gi|119383697|ref|YP_914753.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119383939|ref|YP_914995.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119373464|gb|ABL69057.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119373706|gb|ABL69299.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] Length = 296 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 27/212 (12%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +L+A ++S+ L A+S R+ V+ PILDIMQ++P +L V M L Sbjct: 103 KTISMVLAATLLSIAIGLPLGVLMARSARVQRVVSPILDIMQTMPSFVYLIPVV---MLL 159 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G+V G I+A+ M + + ++ E + +F S WQK +P Sbjct: 160 GIGRVPGLIAVVIYALPP-----MIRLTNLGIRQVDPEVLEATDAFGSSAWQKLVKAQLP 214 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 ++P G+ +MM+++ M+V+ ++I + G+G + AI Q L Sbjct: 215 LALPTIMAGINQTIMMALA----------MVVIA-SMIGVQGLGQPVLRAISNQYFTLGL 263 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 + ++G+ L+D R W + + R Sbjct: 264 FNGFAIVGIAILFD----RISQAWGKRLQKHR 291 >gi|322805685|emb|CBZ03250.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Clostridium botulinum H04402 065] Length = 253 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 5/164 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV+ I+I+ ++ I +GI G + ++P + A P V ++++ V Sbjct: 68 SIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATP--VMSIIIIALVWLKS 125 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ S+LM F I NV++G + E+A+ + + I LP PY Sbjct: 126 SSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPY 182 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 ++G + G W S+ SEV S + L A +TE+ Sbjct: 183 IISGILMCLGIGWKVSVASEVLSTPRYSIGLNLLNAKATLATEE 226 >gi|256842287|ref|ZP_05547791.1| choline ABC transporter, permease [Parabacteroides sp. D13] gi|262384806|ref|ZP_06077938.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_1_33B] gi|256736171|gb|EEU49501.1| choline ABC transporter, permease [Parabacteroides sp. D13] gi|262293522|gb|EEY81458.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_1_33B] Length = 277 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ +I+L+ A+S R ++ P+LD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P D+ E +RSF + Q + + +P Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPADIVEATRSFGATSSQLLYKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 ++P G+ +M+S+S VV + MI G Sbjct: 199 LALPTIMTGVNQTIMLSLS----MVVIAAMISAG 228 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 18/186 (9%) Query: 337 NQRVSYMLDIF--------WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383 N V +D F ++ ++ G+A+ +AW G V FT +L + +G Sbjct: 27 NDGVGGFIDTFQDGLTWIPFYVMILGLAL-LAWFKAGKGVGVFTALGLLLIYGMGFWVET 85 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 T+ V+ IIA +I +P+GIW I P L+ PA V+ + V + Sbjct: 86 MQTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYL---IPAVLF 142 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L P +IF + + G P D E SF T + + LP Sbjct: 143 FGLGPVPGAFATVIFAMPPVVRLTDL-GIRQVPADIVEATRSFGATSSQLLYKVQLPLAL 201 Query: 504 PYYVTG 509 P +TG Sbjct: 202 PTIMTG 207 >gi|213966988|ref|ZP_03395138.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301385173|ref|ZP_07233591.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302134136|ref|ZP_07260126.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928310|gb|EEB61855.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 282 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 16/170 (9%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS +I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ KV+ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 EV + + S ++ + +P ++PGL + MS W F+VA+E+I Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAA 223 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + AW + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|220924993|ref|YP_002500295.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219949600|gb|ACL59992.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 277 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ I + +PVG+ +G + + P Q+L P + PL + ++ Sbjct: 84 SLGRVIAGFAIGVALALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPL---AIVWFG 140 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L N L+ GT + +L N +AG + + A + W +R +ILP P+ Sbjct: 141 LG-NPPALFLIAIGTFFPVLVNTVAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAASPF 199 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + G G A+ IV+E+ + + GLG I E+ E Sbjct: 200 VLAGMRIGIGTAFIVVIVAEMIAV------SDGLGYRILEARE 236 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 8/158 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 LP A + R+++ I + L S RL ++ P+L I++ IP + ++ Sbjct: 76 ELPHDAVASLGRVIAGFAIGVALALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPLA 135 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +V+F P A+F I + + + + + +R+ W Sbjct: 136 IVWFGLGNP--------PALFLIAIGTFFPVLVNTVAGVRQVDSIYIRAARNLGAGPWTL 187 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 F + +P + P ++ M + + + V+ +EMI V D Sbjct: 188 FRRVILPAASPFVLAGMRIGIGTAFIVVIVAEMIAVSD 225 >gi|148379346|ref|YP_001253887.1| ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153932069|ref|YP_001383721.1| putative ABC transporter, permease protein [Clostridium botulinum A str. ATCC 19397] gi|153935138|ref|YP_001387270.1| putative ABC transporter, permease protein [Clostridium botulinum A str. Hall] gi|148288830|emb|CAL82914.1| ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|152928113|gb|ABS33613.1| putative ABC transporter, permease protein [Clostridium botulinum A str. ATCC 19397] gi|152931052|gb|ABS36551.1| putative ABC transporter, permease protein [Clostridium botulinum A str. Hall] Length = 253 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 5/164 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV+ I+I+ ++ I +GI G + ++P + A P V ++++ V Sbjct: 68 SIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLVVTIKATP--VMSIIIIALVWLKS 125 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ S+LM F I NV++G + E+A+ + + I LP PY Sbjct: 126 SSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPY 182 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 ++G + G W S+ SEV S + L A +TE+ Sbjct: 183 IISGILMCLGIGWKVSVASEVLSTPRYSIGLNLLNAKATLATEE 226 >gi|227523463|ref|ZP_03953512.1| binding-protein-dependent transport system inner membrane component [Lactobacillus hilgardii ATCC 8290] gi|227089390|gb|EEI24702.1| binding-protein-dependent transport system inner membrane component [Lactobacillus hilgardii ATCC 8290] Length = 251 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 11/189 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 II ++I + +G+++G + PF +++ PA + PL + ++ Sbjct: 68 IIGTLIGVVLGLFMGRYRQFNYWSFPFLKVIGIIPAAAWMPLTMVIFPTSYMAE----IF 123 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ F + + F I G + D+ E A + + ++ R +++PG P G TA Sbjct: 124 LIAFAVWFPVAFMTIGGVQSISTDYFESAKTLGFSEFQILRKVVIPGALPNIFIGIFTAM 183 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574 G ++ ++SE+ GLG YI + G++ +V ++IM + FL Sbjct: 184 GLSFTMLVISEMIG------AKVGLGWYINWAKGVGNYTQVYAAIVIMAVLFSVIFSFL- 236 Query: 575 HPLYLYGTR 583 + L Y R Sbjct: 237 NKLQEYALR 245 >gi|224825054|ref|ZP_03698160.1| nitrate ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224602725|gb|EEG08902.1| nitrate ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 304 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F P A+I+ IF S VW M + + + Sbjct: 148 PVISLLRPVSPLAWLPIGLLVFKAASP--------ASIWVIFISSVWPMILNTAAGVRAV 199 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R RLS ++ F + P +P ++ + +S+ W +VA+EM+ G Sbjct: 200 PQDYLNVARVLRLSEFKVFTTILFPSVLPHVLTGVRLSIGVAWLVIVAAEMLTGG 254 Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust. Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 6/146 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP G +G +S+ P LL + P + + + Sbjct: 114 SLGRVGIGFGLAALVGIPAGFILGRFAFVSAMFAPVISLLRPVSPLAWLP--IGLLVFKA 171 Query: 446 LNP-NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +P ++W+ + + W ++ N AG A P D+ VA ++ ++ + I+ P + P Sbjct: 172 ASPASIWV---IFISSVWPMILNTAAGVRAVPQDYLNVARVLRLSEFKVFTTILFPSVLP 228 Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530 + +TG + G AW + +E+ + G Sbjct: 229 HVLTGVRLSIGVAWLVIVAAEMLTGG 254 >gi|153006707|ref|YP_001381032.1| binding-protein-dependent transport systems inner membrane component [Anaeromyxobacter sp. Fw109-5] gi|152030280|gb|ABS28048.1| binding-protein-dependent transport systems inner membrane component [Anaeromyxobacter sp. Fw109-5] Length = 274 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +++ +P+G+ +G +P + + P Q+L P + PL + ++ Sbjct: 81 SLIRVAGGFALGAVLALPLGLLMGAKPMVYELMNPLVQILRPIPPIAYIPL---AILWFG 137 Query: 446 L-NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L NP + L+ G + IL N IAG + A + + W + I++P P Sbjct: 138 LGNPPAFF--LISLGAFFPILMNTIAGVRNVDAIYLRAAKNLGASEWTLFWRIMIPAAMP 195 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y + G G A+ IV+E+ + +GLG I E+ E +V+ G++ + Sbjct: 196 YILAGVRIGIGVAFIVVIVAEMIA------VNSGLGYRILEAREYFWSDKVIAGMISIGL 249 Query: 565 FVLALNRFL 573 L ++ F+ Sbjct: 250 AGLGIDFFM 258 >gi|94991665|ref|YP_599764.1| glycine betaine-binding protein / glycine betaine transport system permease protein [Streptococcus pyogenes MGAS2096] gi|94545173|gb|ABF35220.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus pyogenes MGAS2096] Length = 339 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|21909680|ref|NP_663948.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS315] gi|21903863|gb|AAM78751.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS315] Length = 561 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 88 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 144 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 145 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 198 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 199 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 238 >gi|254409551|ref|ZP_05023332.1| ABC transporter, permease protein [Microcoleus chthonoplastes PCC 7420] gi|196183548|gb|EDX78531.1| ABC transporter, permease protein [Microcoleus chthonoplastes PCC 7420] Length = 282 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 WQ+I V+ +T D+ I ++FRV+ ++A++I IP+G ++G I + ++P Sbjct: 73 WQAI---VSLWTSGDLPQDI---VASVFRVLCGFLLAALISIPLGTFMGTFASIRALMEP 126 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 ++ PA F PL+ + Y+ + + LL+ GT ++ ++ P + Sbjct: 127 IIGIVRYMPAPAFIPLL---ILYFGVGETPKI-LLIFIGTLFFNTLMIMDSVKFVPKELI 182 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITAC----GGAWNASIVSEVASWGHIHLRT 536 E +S+ + G R ++L IFP+ + I AC +WN IV+E+ + T Sbjct: 183 E--TSYTLGGKR--HQVLLNVIFPFILPSIIDACRVNIAASWNLVIVAELVA------AT 232 Query: 537 TGLGAYIA 544 GLG I+ Sbjct: 233 EGLGRRIS 240 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/175 (20%), Positives = 76/175 (43%), Gaps = 14/175 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 LPQ + R+L +++ L + T + ++ PI+ I++ +P F+ Sbjct: 84 DLPQDIVASVFRVLCGFLLAALISIPLGTFMGTFASIRALMEPIIGIVRYMPAPAFIPLL 143 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++YF E I IF ++ T + S+ +P++L E S + Q Sbjct: 144 ILYFGV--------GETPKILLIFIGTLFFNTLMIMDSVKFVPKELIETSYTLGGKRHQV 195 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + PF +P ++ ++++ W V+ +E++ + G+G I++A + Sbjct: 196 LLNVIFPFILPSIIDACRVNIAASWNLVIVAELVAATE------GLGRRISVAQR 244 >gi|94989669|ref|YP_597769.1| glycine betaine-binding protein / glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10270] gi|94543177|gb|ABF33225.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10270] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|150006771|ref|YP_001301514.1| glycine betaine/L-proline transport system permease [Parabacteroides distasonis ATCC 8503] gi|298377733|ref|ZP_06987684.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_19] gi|301309036|ref|ZP_07214981.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 20_3] gi|149935195|gb|ABR41892.1| glycine betaine/L-proline transport system permease [Parabacteroides distasonis ATCC 8503] gi|298265436|gb|EFI07098.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_19] gi|300833062|gb|EFK63687.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 20_3] Length = 277 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ +I+L+ A+S R ++ P+LD+MQ++P +L V++F Sbjct: 87 QTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P D+ E +RSF + Q + + +P Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPADIVEATRSFGATSSQLLYKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 ++P G+ +M+S+S VV + MI G Sbjct: 199 LALPTIMTGVNQTIMLSLS----MVVIAAMISAG 228 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 18/186 (9%) Query: 337 NQRVSYMLDIF--------WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----- 383 N V +D F ++ ++ G+A+ +AW G V FT +L + +G Sbjct: 27 NDGVGGFIDAFQDGLTWIPFYVMILGLAL-LAWFKAGKGVGVFTALGLLLIYGMGFWVET 85 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 T+ V+ IIA +I +P+GIW I P L+ PA V+ + V + Sbjct: 86 MQTLALVLSSTIIALMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYL---IPAVLF 142 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L P +IF + + G P D E SF T + + LP Sbjct: 143 FGLGPVPGAFATVIFAMPPVVRLTDL-GIRQVPADIVEATRSFGATSSQLLYKVQLPLAL 201 Query: 504 PYYVTG 509 P +TG Sbjct: 202 PTIMTG 207 >gi|124268670|ref|YP_001022674.1| nitrate ABC transporter permease [Methylibium petroleiphilum PM1] gi|124261445|gb|ABM96439.1| nitrate ABC transporter permease protein [Methylibium petroleiphilum PM1] Length = 295 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 7/127 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + ++ IF IF VW M + + + R+ V+R+ +S +K + + +P + P ++ Sbjct: 165 SSISGIFVIFICSVWPMLINTAFGVAGVRREWLNVARTLEVSPLRKAFEVILPAAAPTIL 224 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +SM W +VA+EM+V G GIG ++ L +++A+L ++GV+ Sbjct: 225 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVIFAIL-VIGVVG 277 Query: 254 LYDQLLF 260 + LLF Sbjct: 278 MLLDLLF 284 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG P + + PF Q+L + PL + + Sbjct: 107 SLGRVGLGFALAALVAIPLGFLIGMSPLVYRALDPFIQVLKPISPLAWMPLALYTIKDSS 166 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ + +IF + W +L N G + ++ VA + ++ R +ILP P Sbjct: 167 IS-----GIFVIFICSVWPMLINTAFGVAGVRREWLNVARTLEVSPLRKAFEVILPAAAP 221 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V+ +L++ Sbjct: 222 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSLTNVIFAILVIGV 275 Query: 565 FVLALN 570 + L+ Sbjct: 276 VGMLLD 281 >gi|187923484|ref|YP_001895126.1| binding-protein-dependent transporters inner membrane component [Burkholderia phytofirmans PsJN] gi|187714678|gb|ACD15902.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 247 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 26/188 (13%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L ++ + I LL A++++ +RR L P++ +QS+P + +V+F + Sbjct: 65 ALALVGGLAIGLL-----ASMSSIARR---TLFPLVTALQSMPKIALAPLLIVWFGYGFA 116 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K+ A L A F I + + L +PR+L+E R+ S + FW+L +P + Sbjct: 117 SKLAAAVLFAFFPIVIATM--------GGLAGVPRNLDEHFRALGASPARTFWHLRLPAA 168 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA---M 245 +P L+ + ++M +A +VG+ + G+G I A A+ +A M Sbjct: 169 LPALIDGLKIAMP------LAVIGAIVGEFIGSESGLGHLIVFATSNAQ-TALSFAAILM 221 Query: 246 LTMLGVIF 253 +T L ++F Sbjct: 222 VTALAMLF 229 >gi|28895060|ref|NP_801410.1| glycine-betaine binding permease protein [Streptococcus pyogenes SSI-1] gi|28810305|dbj|BAC63243.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes SSI-1] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|254360698|ref|ZP_04976847.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261491837|ref|ZP_05988416.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494692|ref|ZP_05991172.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091238|gb|EDN73243.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261309657|gb|EEY10880.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312492|gb|EEY13616.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 247 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/188 (21%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ V ++ A +I +P+G+ +GF H+ P QLL + P++V + Sbjct: 61 SLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRMISPLSWMPIIVMLLGVGD 120 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L + L+ F T W ++ + +G + + ++ T I++P I + Sbjct: 121 LP----IYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSATRKELLCKIVVPAITGH 176 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G AW + E+ GLG +I ++ ++ ++ E++ ++I+ Sbjct: 177 VLTGLRVAVGIAWVVLVPCEMLGVNQ------GLGYFILDTRDRLAYSELMAVIIIIGLI 230 Query: 566 VLALNRFL 573 AL+ + Sbjct: 231 GWALDSLI 238 >gi|94993560|ref|YP_601658.1| glycine betaine-binding protein / glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10750] gi|94547068|gb|ABF37114.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10750] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|71909972|ref|YP_281522.1| glycine betaine-binding protein/glycine betaine transporter permease [Streptococcus pyogenes MGAS5005] gi|71852754|gb|AAZ50777.1| glycine betaine-binding protein/glycine betaine transport system permease protein [Streptococcus pyogenes MGAS5005] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|332999415|gb|EGK19000.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri VA-6] Length = 354 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|323173039|gb|EFZ58670.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli LT-68] Length = 354 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPVIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|312961036|ref|ZP_07775541.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311284694|gb|EFQ63270.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 321 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 41/219 (18%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L A+S RL M L P+LD MQ++P +L V+ F G V G + IF++ Sbjct: 120 GVLCARSDRLEMFLRPVLDAMQTLPAFVYLVPVVMLF---GIGNVPGVLVTIIFSV-APL 175 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 V + Q +P D E +R+F + +Q + +P + P GL +M+S+S Sbjct: 176 VRLTNLGIRQ----VPEDKVEAARAFGCTPYQMLRRVQLPLAAPTIMAGLNQALMLSLS- 230 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-LAILYAMLTMLGVIFLYDQLLFR 261 VV + MI VG G+G + I D+ LA + + +L IFL D+L Sbjct: 231 ---MVVIASMISVG-------GLGMMVLRGIGRLDMGLATVGGLGLVLLAIFL-DRL--- 276 Query: 262 PMIVWSNKFRLERTTGIYPADSW-------VLYLFRKTN 293 + ER+ + W V+Y ++ N Sbjct: 277 ------TQAMGERSNRATKGEHWYQTGPAGVVYRLKRKN 309 >gi|300986100|ref|ZP_07177716.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|300407925|gb|EFJ91463.1| ABC transporter, permease protein [Escherichia coli MS 45-1] Length = 324 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 141 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 195 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 196 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 248 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 249 VVIASMIAVG-------GLGQMVLRGIGRLDM 273 >gi|291518791|emb|CBK74012.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Butyrivibrio fibrisolvens 16/4] Length = 253 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV IAS++ I +G G P I I P A + P + PL++ Sbjct: 62 SLIRVVQGYAIASVLGISLGALAGMIPFIRKLILPAATAIRQVPIIAWIPLIILWCGIGE 121 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ ++++ + I+ N ++G S+ + EVAS + + W + + LP P Sbjct: 122 LSK----VVVIVIAATFPIMINTMSGVSSTSDLLLEVASLYKLGKWETFLKVYLPNALPS 177 Query: 506 YVTGAITACGGAWNASIVSEV 526 + G G +W A + +E+ Sbjct: 178 ILVGLKLGMGASWMAVVAAEM 198 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L Q + +R++ I+ + LA + +++P ++ +PI+ ++ Sbjct: 54 QLQQDIIASLIRVVQGYAIASVLGISLGALAGMIPFIRKLILPAATAIRQVPIIAWIPLI 113 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ KV+ +AA F I + T S S ++ L EV+ ++L W+ Sbjct: 114 ILWCGIGELSKVVVIVIAATFPIMIN-----TMSGVSSTSDL---LLEVASLYKLGKWET 165 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 F + +P ++P ++ + + M W VVA+EM+ Sbjct: 166 FLKVYLPNALPSILVGLKLGMGASWMAVVAAEML 199 >gi|260598202|ref|YP_003210773.1| nitrate transport permease nrtB [Cronobacter turicensis z3032] gi|260217379|emb|CBA31423.1| Nitrate transport permease protein nrtB [Cronobacter turicensis z3032] Length = 293 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LG + P++ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 132 LGRMFNPLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTA 183 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP D V+R +LS W + P +P ++ + +S+ W +VA+EM+ Sbjct: 184 EGVKRIPDDYLNVARVLQLSEWTVMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTG 243 Query: 216 G 216 G Sbjct: 244 G 244 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP+G IG + P LL + P + + + Sbjct: 104 SLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLP--IGLLLFQK 161 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P+D+ VA ++ W R I+ P + P Sbjct: 162 AEPAS--SWTIFICSIWPMVINTAEGVKRIPDDYLNVARVLQLSEWTVMRRILFPAVLPA 219 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 220 VLTGVRLSIGIAWLVIVAAEMLTGG 244 >gi|193077101|gb|ABO11872.2| ABC taurine transporter permease subunit [Acinetobacter baumannii ATCC 17978] Length = 289 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 97 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + ++ILP P+ Sbjct: 157 TTK----VLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + SE+ + G+G + + + V+LG++++ Sbjct: 213 IITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266 Query: 566 VLALNRFL 573 ++ FL Sbjct: 267 AVSFELFL 274 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSTHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VASE++ Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVASELV 234 >gi|227871942|ref|ZP_03990333.1| binding-protein-dependent transport systems inner membrane component [Oribacterium sinus F0268] gi|227842203|gb|EEJ52442.1| binding-protein-dependent transport systems inner membrane component [Oribacterium sinus F0268] Length = 296 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/192 (20%), Positives = 91/192 (47%), Gaps = 19/192 (9%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 IIA+++ + +G+++G H+S + P ++++ P ++ P V+ + + + +++ Sbjct: 117 IIATVLGVSLGLFVGLSDHLSGIVLPIVRVISPIPPIIYSPYAVALLPTFRVA-AIFVVT 175 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L IF W + N++ A + +++ + +I+ + PY + G I + Sbjct: 176 LTIF---WSLFMNMVLSVREIDPKIMNSAKTLNVSKFS----MIVDVLIPYSLPGLINSI 228 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574 + + S + V + + T+GLG YI ++ +F +VV G+ ++ V LN Sbjct: 229 SVSISTSFL--VLTAAEMIGGTSGLGWYIKYHSDFANFDKVVFGIFMIGLVVTILN---- 282 Query: 575 HPLYLYGTRCLR 586 +G + LR Sbjct: 283 -----FGVKSLR 289 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S L +++PI+ ++ IP + + + V +AAIF + + W++ Sbjct: 133 SDHLSGIVLPIVRVISPIPPIIYSPYAVALLPTF--------RVAAIFVVTLTIFWSLFM 184 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 +M S+ I + +++ +S + + +P+S+PGL+ ++ +S+S + + A+EM Sbjct: 185 NMVLSVREIDPKIMNSAKTLNVSKFSMIVDVLIPYSLPGLINSISVSISTSFLVLTAAEM 244 Query: 213 IVVGDTVIPLPGIGSYI 229 I G T G+G YI Sbjct: 245 I--GGT----SGLGWYI 255 >gi|71902822|ref|YP_279625.1| glycine betaine transport system permease protein [Streptococcus pyogenes MGAS6180] gi|71801917|gb|AAX71270.1| glycine betaine-binding protein [Streptococcus pyogenes MGAS6180] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 158 PGVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADV 252 >gi|313902347|ref|ZP_07835751.1| binding-protein-dependent transport systems inner membrane component [Thermaerobacter subterraneus DSM 13965] gi|313467395|gb|EFR62905.1| binding-protein-dependent transport systems inner membrane component [Thermaerobacter subterraneus DSM 13965] Length = 285 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 22/172 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R+ +++P+LD MQ++P +L ++ F L P + LA + + Sbjct: 118 AESCRVHALVIPVLDAMQTMPSFVYLIPVMMLFQALGP---VPGTLATVVYALPPVARLV 174 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + Q +P D++E +R+F + WQ + +P ++P G+ MM+++ Sbjct: 175 DLGIRQ----VPADVQEAARAFGATRWQLLAQVRLPLALPSIMAGINQTTMMALA----M 226 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G G+G + AI+ D A + T++ + + D+L Sbjct: 227 VVIASMVGAG-------GVGEAVMRAIQRVDPGAGFESGFTIVALAIVMDRL 271 >gi|121607614|ref|YP_995421.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121552254|gb|ABM56403.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 254 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 19/209 (9%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +TTL L ++++ A L A SR + + P+L QSIP + VV+F Sbjct: 61 KTTLATLGGFGLTIVIGIPIAMLIAYSRLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFG 120 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + P KVI A L F + S V M F ++ D+ +++RS S Q F+ + + Sbjct: 121 ILP-KVISAFLLGFFPVVVSTV--MGFK------SVEPDMLDLARSMGASRLQTFFKISL 171 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + + +S++ +A VVG+ V GIG + +A DL + A+ Sbjct: 172 PQALPAIFSGLKVSVT------LAVVGAVVGEFVGANSGIGYVLQVANGNFDLPLMFAAL 225 Query: 246 --LTMLGVI-FLYDQLLFRPMIVWSNKFR 271 L+ +GVI F+ L+ R MI W R Sbjct: 226 VVLSSIGVILFVAVDLIERSMIPWHASQR 254 >gi|94987791|ref|YP_595892.1| glycine betaine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94541299|gb|ABF31348.1| glycine betaine-binding protein [Streptococcus pyogenes MGAS9429] Length = 578 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|50913550|ref|YP_059522.1| glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10394] gi|139473033|ref|YP_001127748.1| glycine-betaine binding permease protein [Streptococcus pyogenes str. Manfredo] gi|50902624|gb|AAT86339.1| Glycine betaine-binding protein [Streptococcus pyogenes MGAS10394] gi|134271279|emb|CAM29495.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes str. Manfredo] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|258614687|ref|ZP_05712457.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium DO] Length = 560 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|307152000|ref|YP_003887384.1| binding-protein-dependent transporter inner membrane component [Cyanothece sp. PCC 7822] gi|306982228|gb|ADN14109.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7822] Length = 273 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 10/159 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ RV + + +I+ +P+GI +G I + ++P ++ PA F PL+ + Y Sbjct: 82 ISFLRVSLGFFLGAIVAVPLGISMGAFASIRALVEPIMGVVRYMPAPAFIPLL---MIYL 138 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ ++L+ + GT ++ ++ G P + EVA + ++ R +I+P + P Sbjct: 139 GIDEPSKIALIFL-GTVFFNTLMIMDGVKFIPKELIEVAYTLGGNRFQVVRQVIIPYVIP 197 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + AWN +V+E+ + TGLG I Sbjct: 198 NIIDTFRINMAAAWNLVVVAELVA------AQTGLGKRI 230 Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 15/160 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ +P F+ ++Y P K I IF V+ T + + I Sbjct: 117 PIMGVVRYMPAPAFIPLLMIYLGIDEPSK--------IALIFLGTVFFNTLMIMDGVKFI 168 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P++L EV+ + + +Q + +P+ +P ++ ++M+ W VV +E++ Sbjct: 169 PKELIEVAYTLGGNRFQVVRQVIIPYVIPNIIDTFRINMAAAWNLVVVAELVAAQT---- 224 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G I LA K I +A L +LGVI L FR Sbjct: 225 --GLGKRILLAQKFLKTDEI-FACLIVLGVIGFAIDLSFR 261 >gi|108802309|ref|YP_642506.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. MCS] gi|119871462|ref|YP_941414.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. KMS] gi|126438291|ref|YP_001073982.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. JLS] gi|108772728|gb|ABG11450.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. MCS] gi|119697551|gb|ABL94624.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. KMS] gi|126238091|gb|ABO01492.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. JLS] Length = 271 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 4/114 (3%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 IA ++ GI +G + + ++P + L P+ PLVV + + L+L+ Sbjct: 87 IAVVLGTVAGIGLGLLVPLEALLRPVIEFLRPVPSVALIPLVVLTIGTGSQS-ALFLA-- 143 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 +F W +L IAG A E A S+H+T W+ R+I LP + PY T Sbjct: 144 -VFAAFWQVLVPAIAGVRAAHPVALETARSYHLTVWQRIRWIQLPSMLPYLATA 196 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 15/166 (9%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L P+++ ++ +P + + V+ G++ A A+F + W + Sbjct: 105 LEALLRPVIEFLRPVPSVALIPLVVLTIGT-------GSQSALFLAVFAA-FWQVLVPAI 156 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + E +RS+ L+ WQ+ ++ +P +P L + ++ S VV +E+I Sbjct: 157 AGVRAAHPVALETARSYHLTVWQRIRWIQLPSMLPYLATAIRLATSTTLILVVTAEII-- 214 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 I +PGIG I ++ D A +YA + + G+ + L R Sbjct: 215 ----IQMPGIGYEITMSRSAGD-PARMYAYIAVSGLAGIVLNALMR 255 >gi|315291003|gb|EFU50368.1| ABC transporter, permease protein [Escherichia coli MS 153-1] Length = 327 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 144 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 198 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 199 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 251 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 252 VVIASMIAVG-------GLGQMVLRGIGRLDM 276 >gi|306842376|ref|ZP_07475033.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO2] gi|306287515|gb|EFM58980.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO2] Length = 281 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 17/197 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q A RT + V+S++ L A+S RL ++ PILD+MQ++P +L V Sbjct: 84 QDAMRTISMIFVCTVLSIIIGLPIGILMARSERLQRIINPILDVMQTMPSFVYLIPVV-- 141 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L G+V G I+AI ++ N+ + + +D+ E + +F S QK + Sbjct: 142 -MLLGIGRVPGLIAVVIYAIPPIIRLTNLGIRL------VDKDVLEAADAFGSSNIQKLF 194 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P ++ + ++ VV + MI V G+G + AI Q Sbjct: 195 KVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLG 247 Query: 242 LYAMLTMLGVIFLYDQL 258 ++ L ++G+ ++D++ Sbjct: 248 IFNGLAIVGIAIIFDRV 264 >gi|306828147|ref|ZP_07461410.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Streptococcus pyogenes ATCC 10782] gi|304429684|gb|EFM32730.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Streptococcus pyogenes ATCC 10782] Length = 575 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK+ + ++ PILD MQ++P +L V +F G V Sbjct: 102 LVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ ++ +IP +L E S +F +G QK + + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------AIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 IMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|260555329|ref|ZP_05827550.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] gi|260411871|gb|EEX05168.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] Length = 289 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 97 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + Y+ILP P+ Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWYVILPTALPH 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFIVQSAAQFLITDTVILGIIVIAIV 266 Query: 566 VLALNRFL 573 ++ FL Sbjct: 267 AVSFELFL 274 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FWY+ +P ++P ++ + + + GW +VA+E++ Sbjct: 180 LSHQLNRERAALSLGASQSQVFWYVILPTALPHIITGIRIGLGVGWSTLVAAELV 234 >gi|238796281|ref|ZP_04639791.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] gi|238719974|gb|EEQ11780.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] Length = 251 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R++V + A I IPVGI +G + + + P ++ P + PL+V Sbjct: 59 SLGRILVALFAAVSIGIPVGIAMGINSRLRAVLDPLIEIYRPIPPLAYLPLMVIWFGIGE 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + G + A + T W+ R+++LP P Sbjct: 119 TS-KILLIYLAIFAP---VTLATVVGVRSIEQVKVRAAQALGATRWQVLRFVVLPNALPA 174 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T GLG + ++E + V+ G++++ Sbjct: 175 ILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSASEFLATDVVIAGIIVIALV 228 Query: 566 VLALN 570 L Sbjct: 229 AAGLE 233 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ S + R+L A+ ++ + RL VL P+++I + IP L +L V++ Sbjct: 54 QHLSASLGRILVALFAAVSIGIPVGIAMGINSRLRAVLDPLIEIYRPIPPLAYLPLMVIW 113 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + +T + + +I + +++ + WQ + Sbjct: 114 FG-------IG-ETSKILLIYLAIFAPVTLATVVGVRSIEQVKVRAAQALGATRWQVLRF 165 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 166 VVLPNALPAILTGIRIGLGVGWSTLVAAELI 196 >gi|241766705|ref|ZP_04764544.1| nitrate ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241362958|gb|EER58652.1| nitrate ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 316 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 6/153 (3%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV V +A+++ IP G IG +S P LL + P + Sbjct: 118 VGWNVLASLQRVAVGFGLAAVVGIPAGFAIGRFAFLSRMFNPLISLLRPVSPLAWLP--I 175 Query: 439 SCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + + NP ++ IF + W ++ N G P D+ VA +++ W+ I Sbjct: 176 GLLVFKGANP---AAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLNLSEWKVLTKI 232 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 + P + PY +TG A G AW + +E+ + G Sbjct: 233 LFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 265 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 159 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 210 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 211 PQDYLNVARVLNLSEWKVLTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 265 >gi|126641766|ref|YP_001084750.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii ATCC 17978] Length = 225 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 32 SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 85 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 86 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 145 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 146 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 198 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 42/226 (18%), Positives = 100/226 (44%), Gaps = 18/226 (7%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D++ + + + ++ + R++ V++ L LA + ++L L+P L Sbjct: 9 PLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPL 68 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++ IP + ++ ++ F + +E + IF F ++ + + + + Sbjct: 69 EVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPILLNTVHGVGAVDPR 120 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L ++S S + + +P ++P ++ + + M WF +V +EMI G Sbjct: 121 LVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQH------G 174 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 IG + + Q+ I+ M+ ++G + ++ L R V N+F Sbjct: 175 IGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 216 >gi|167840220|ref|ZP_02466904.1| taurine ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 284 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI I + + P + P + PL+V Sbjct: 94 SLSRIATAFALAVVTAIPVGILIATNRIVRGVVDPVVEFYRPIPPLAYLPLMVVWFGIGD 153 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T ++ R+++LP P Sbjct: 154 AS-----KVLLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRFKLLRHVVLPSALP 208 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 209 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMLYSASRFLVTDVVIAGILVIGA 262 Query: 565 FVLALN 570 LAL Sbjct: 263 IALALE 268 >gi|271963354|ref|YP_003337550.1| ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270506529|gb|ACZ84807.1| ABC transporter, permease protein [Streptosporangium roseum DSM 43021] Length = 263 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 19/190 (10%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A +I VG+ +G RP + P Q A P + P ++ + + P + +++ Sbjct: 77 VLAGVIGTAVGLVLGRRPLYFRFVDPLVQFARAIPPPMLLPFFMAL---FAIGPQMQINV 133 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + +FG W +L N GA + + A F ++ + ++LP P G + Sbjct: 134 I-VFGIIWPVLINAAEGARHIDRQYVDTARVFGLSLKQRLFLLVLPAAMPKIFAGLRVSL 192 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFV 566 A ++SE+ T G+G + ++ P V VLG ++ F+ Sbjct: 193 SLALILMVISELVG------STDGIGFQLLDAQRSYDLPGVWGTIVVLGVLGYVLNSAFL 246 Query: 567 LALNRFL-WH 575 A R L WH Sbjct: 247 AAERRVLSWH 256 >gi|170765814|ref|ZP_02900625.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia albertii TW07627] gi|170124960|gb|EDS93891.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia albertii TW07627] Length = 353 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 170 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 224 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 225 TI---LGINQVPADLIEASRSFGASPHQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 277 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 278 VVIASMIAVG-------GLGQMVLRGIGRLDM 302 >gi|293568393|ref|ZP_06679714.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E1071] gi|291588914|gb|EFF20741.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E1071] Length = 575 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|227552551|ref|ZP_03982600.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecium TX1330] gi|257896894|ref|ZP_05676547.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium Com12] gi|293378476|ref|ZP_06624639.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecium PC4.1] gi|227178300|gb|EEI59272.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecium TX1330] gi|257833459|gb|EEV59880.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium Com12] gi|292642805|gb|EFF60952.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecium PC4.1] Length = 574 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|226314655|ref|YP_002774551.1| glycine betaine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097605|dbj|BAH46047.1| glycine betaine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 281 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 25/201 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 +++ T +L+A +IS++ AK+ + V+ P+LD MQ++P +L ++ Sbjct: 91 EHSMETLALVLTAGLISVIIGIPVGIWCAKNDSVQKVVTPLLDFMQTMPAFVYL-IPAIF 149 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F L GKV G + IFA+ T ++ N+ + +P DL E S +F + WQK Sbjct: 150 FFGL--GKVPGVIASVIFAMPPTIRLTNL------GIRQVPADLIEASEAFGSTYWQKLT 201 Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ + Sbjct: 202 KVQLPIAKTTMMAGINQSIMLALS----------MVVIA-SMIGAKGLGADVYRAVTQIK 250 Query: 238 LLAILYAMLTMLGVIFLYDQL 258 + A L ++ + L D+L Sbjct: 251 IGEGFEAGLAIVILAILLDRL 271 >gi|296159222|ref|ZP_06842048.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295890481|gb|EFG70273.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 283 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T S Q P L+EV+R F SGWQ+ YL +P ++P L + ++ + W +V Sbjct: 163 VTLSTLQGFRQTPATLDEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVV 222 Query: 210 SEMIVVGD 217 E++ + Sbjct: 223 VELVASSE 230 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + + + G P EVA F +GW+ Y++LP P TG A AW A +V Sbjct: 163 VTLSTLQGFRQTPATLDEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVV 222 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 E+ + + GLG I + V+ V+++ A+NR L Sbjct: 223 VELVA------SSEGLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 266 >gi|21227463|ref|NP_633385.1| ABC transporter permease [Methanosarcina mazei Go1] gi|20905834|gb|AAM31057.1| ABC transporter, permease protein [Methanosarcina mazei Go1] Length = 262 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++I++ IP L ++ F +V+F + AA F +F ++ + + Y N+ Sbjct: 100 PIIEILRPIPPLAWIPFAIVWFGLTHQ--------AAGFVVFAGMIFPIIINTYTGFKNV 151 Query: 162 PRDLEEVSRSFRLS-GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 PR E ++ + Y+ +P +MP + + ++M GW +VA+EM V + Sbjct: 152 PRVYVEAAKVLGCTRNIDLIRYIAIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSN 208 >gi|300906825|ref|ZP_07124506.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300401426|gb|EFJ84964.1| ABC transporter, permease protein [Escherichia coli MS 84-1] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|194433050|ref|ZP_03065333.1| glycine betaine/L-proline ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194418777|gb|EDX34863.1| glycine betaine/L-proline ABC transporter, permease protein [Shigella dysenteriae 1012] gi|332087399|gb|EGI92527.1| glycine betaine/L-proline transport system permease protein proW [Shigella boydii 5216-82] gi|332088693|gb|EGI93806.1| glycine betaine/L-proline transport system permease protein proW [Shigella dysenteriae 155-74] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|260554118|ref|ZP_05826379.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Acinetobacter sp. RUH2624] gi|260404746|gb|EEW98255.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Acinetobacter sp. RUH2624] Length = 284 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVV+ ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/239 (17%), Positives = 102/239 (42%), Gaps = 18/239 (7%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +N+ P D++ + + + ++ + R++ V++ L LA Sbjct: 55 VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAG 114 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + ++L L+P L++++ IP + ++ ++ F + +E + IF F ++ + Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 166 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S S + +P ++P ++ + + M WF +V +E Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 MI GIG + + Q+ I+ M+ ++G + ++ L R V N+F Sbjct: 227 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275 >gi|257888218|ref|ZP_05667871.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,141,733] gi|257824272|gb|EEV51204.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,141,733] Length = 575 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|114321735|ref|YP_743418.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114228129|gb|ABI57928.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 279 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 8/124 (6%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 +AIF IF VW + + + + +DL V+R+ +LS + + + +P + P ++ M Sbjct: 152 SAIFVIFICSVWPILVNTAFGVAGVKKDLLNVARTLQLSPVKTAFSVILPAAAPTILTGM 211 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLY 255 +++ W +VA+EM+V G G+G ++ DL ++++A+L M+G++ + Sbjct: 212 RIAIGISWLVIVAAEMLVGGT------GVGYFVWNQWNNLDLTSVIFAVL-MIGIVGMIL 264 Query: 256 DQLL 259 D +L Sbjct: 265 DSML 268 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 12/179 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A ++ IP+G +G P + + P+ Q+L + PL + Y + ++ ++ Sbjct: 101 LAVLVAIPLGFVVGMSPVMQKALNPYIQVLRPISPLAWMPL-----ALYIIQDSVQSAIF 155 Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +IF + W IL N G + D VA + ++ + +ILP P +TG A Sbjct: 156 VIFICSVWPILVNTAFGVAGVKKDLLNVARTLQLSPVKTAFSVILPAAAPTILTGMRIAI 215 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +W + +E+ G TG+G ++ V+ VL++ + L+ L Sbjct: 216 GISWLVIVAAEMLVGG------TGVGYFVWNQWNNLDLTSVIFAVLMIGIVGMILDSML 268 >gi|312199718|ref|YP_004019779.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EuI1c] gi|311231054|gb|ADP83909.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EuI1c] Length = 282 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 8/148 (5%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P A + A P PL + S P + +++F + + N + G P+ Sbjct: 118 PLAAAMNAVPIIALAPLFNTMFSTTSAVPRRLVVAIVVF---FPVFVNTVRGLRQVPDVQ 174 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 +E+ S + WR+ R + LPG PY TG A A A++VSE + R GL Sbjct: 175 RELMRSLAVGPWRFARTVQLPGAVPYIFTGFRLASSLAVIAAVVSE-----YFGGRQNGL 229 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G+ I + ++P V C L Sbjct: 230 GSRITSAASNTAYPRAWAFVAAACVLGL 257 >gi|293570838|ref|ZP_06681885.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E980] gi|291609106|gb|EFF38381.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E980] Length = 575 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|146318758|ref|YP_001198470.1| phosphate ABC transporter permease [Streptococcus suis 05ZYH33] gi|223933467|ref|ZP_03625451.1| phosphate ABC transporter, inner membrane subunit PstC [Streptococcus suis 89/1591] gi|253751855|ref|YP_003024996.1| phosphate ABC transporter permease [Streptococcus suis SC84] gi|253753678|ref|YP_003026819.1| phosphate ABC transporter permease [Streptococcus suis P1/7] gi|253755442|ref|YP_003028582.1| phosphate ABC transporter permease [Streptococcus suis BM407] gi|330832920|ref|YP_004401745.1| ABC-type phosphate transport system, permease [Streptococcus suis ST3] gi|145689564|gb|ABP90070.1| ABC-type phosphate transport system, permease component [Streptococcus suis 05ZYH33] gi|223897840|gb|EEF64217.1| phosphate ABC transporter, inner membrane subunit PstC [Streptococcus suis 89/1591] gi|251816144|emb|CAZ51768.1| putative phosphate ABC transporter permease protein [Streptococcus suis SC84] gi|251817906|emb|CAZ55678.1| putative phosphate ABC transporter permease protein [Streptococcus suis BM407] gi|251819924|emb|CAR46006.1| putative phosphate ABC transporter permease protein [Streptococcus suis P1/7] gi|292558425|gb|ADE31426.1| Binding-protein-dependent transport systems related protein [Streptococcus suis GZ1] gi|329307143|gb|AEB81559.1| ABC-type phosphate transport system, permease component [Streptococcus suis ST3] Length = 305 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +R +L P+++++ IP + GF+ VV + +++ G G L+ +F +F + Sbjct: 113 KRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPT 171 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +TF SL +PR E S + + WQ W + + + PG+ ++ M+ + +A Sbjct: 172 VTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALA 231 Query: 210 SEMIVVGDTVIP 221 +M+V VIP Sbjct: 232 IQMVVGNSAVIP 243 >gi|300922748|ref|ZP_07138837.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300420933|gb|EFK04244.1| ABC transporter, permease protein [Escherichia coli MS 182-1] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|24113982|ref|NP_708492.1| glycine betaine transporter membrane protein [Shigella flexneri 2a str. 301] gi|30064045|ref|NP_838216.1| glycine betaine transporter membrane protein [Shigella flexneri 2a str. 2457T] gi|110806689|ref|YP_690209.1| glycine betaine transporter membrane protein [Shigella flexneri 5 str. 8401] gi|24053095|gb|AAN44199.1| glycine betaine/L-proline transport system permease protein [Shigella flexneri 2a str. 301] gi|30042301|gb|AAP18026.1| glycine betaine/L-proline transport system permease protein [Shigella flexneri 2a str. 2457T] gi|110616237|gb|ABF04904.1| high-affinity transport system for glycine betaine and proline [Shigella flexneri 5 str. 8401] gi|281602054|gb|ADA75038.1| putative ABC-type proline/glycine betaine transport system, permease component [Shigella flexneri 2002017] gi|313648328|gb|EFS12772.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri 2a str. 2457T] gi|332753396|gb|EGJ83776.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri 4343-70] gi|332753903|gb|EGJ84278.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-671] gi|332755699|gb|EGJ86062.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri 2747-71] gi|332765628|gb|EGJ95841.1| binding--dependent transport system inner membrane component family protein [Shigella flexneri 2930-71] gi|333000638|gb|EGK20215.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-218] gi|333015889|gb|EGK35225.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-304] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|16130592|ref|NP_417164.1| glycine betaine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89109471|ref|AP_003251.1| glycine betaine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|157162129|ref|YP_001459447.1| glycine betaine transporter membrane protein [Escherichia coli HS] gi|170019070|ref|YP_001724024.1| glycine betaine transporter membrane protein [Escherichia coli ATCC 8739] gi|170082263|ref|YP_001731583.1| glycine betaine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188496143|ref|ZP_03003413.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 53638] gi|194439438|ref|ZP_03071514.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 101-1] gi|238901822|ref|YP_002927618.1| glycine betaine transporter subunit [Escherichia coli BW2952] gi|253772461|ref|YP_003035292.1| glycine betaine transporter membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037720|ref|ZP_04871778.1| glycine betaine/L-proline ABC transporter [Escherichia sp. 1_1_43] gi|254162615|ref|YP_003045723.1| glycine betaine transporter membrane protein [Escherichia coli B str. REL606] gi|256024810|ref|ZP_05438675.1| glycine betaine transporter membrane protein [Escherichia sp. 4_1_40B] gi|293415929|ref|ZP_06658569.1| glycine betaine transporter membrane protein [Escherichia coli B185] gi|297517416|ref|ZP_06935802.1| glycine betaine transporter membrane protein [Escherichia coli OP50] gi|300930531|ref|ZP_07145927.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300949074|ref|ZP_07163121.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300957449|ref|ZP_07169662.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|301026688|ref|ZP_07190099.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301645343|ref|ZP_07245290.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|307139370|ref|ZP_07498726.1| glycine betaine transporter membrane protein [Escherichia coli H736] gi|312973111|ref|ZP_07787284.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 1827-70] gi|331643366|ref|ZP_08344497.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H736] gi|130992|sp|P14176|PROW_ECOLI RecName: Full=Glycine betaine/L-proline transport system permease protein proW gi|147374|gb|AAA24428.1| proW peptide [Escherichia coli] gi|1789033|gb|AAC75725.1| glycine betaine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|1800066|dbj|BAA16543.1| glycine betaine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|157067809|gb|ABV07064.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli HS] gi|169753998|gb|ACA76697.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli ATCC 8739] gi|169890098|gb|ACB03805.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188491342|gb|EDU66445.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 53638] gi|194421614|gb|EDX37625.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 101-1] gi|226839344|gb|EEH71365.1| glycine betaine/L-proline ABC transporter [Escherichia sp. 1_1_43] gi|238861367|gb|ACR63365.1| glycine betaine transporter subunit [Escherichia coli BW2952] gi|242378240|emb|CAQ33015.1| proW, subunit of proline ABC transporter [Escherichia coli BL21(DE3)] gi|253323505|gb|ACT28107.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974516|gb|ACT40187.1| glycine betaine transporter subunit [Escherichia coli B str. REL606] gi|253978683|gb|ACT44353.1| glycine betaine transporter subunit [Escherichia coli BL21(DE3)] gi|260448264|gb|ACX38686.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli DH1] gi|291432118|gb|EFF05100.1| glycine betaine transporter membrane protein [Escherichia coli B185] gi|299879610|gb|EFI87821.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300315805|gb|EFJ65589.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300451460|gb|EFK15080.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300461587|gb|EFK25080.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|301076377|gb|EFK91183.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|309703043|emb|CBJ02375.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310333053|gb|EFQ00267.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 1827-70] gi|315137291|dbj|BAJ44450.1| glycine betaine transporter membrane protein [Escherichia coli DH1] gi|315615065|gb|EFU95702.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 3431] gi|323935628|gb|EGB31945.1| inner membrane transport system [Escherichia coli E1520] gi|323941486|gb|EGB37669.1| inner membrane transport system [Escherichia coli E482] gi|323960576|gb|EGB56203.1| inner membrane transport system [Escherichia coli H489] gi|323971477|gb|EGB66712.1| inner membrane transport system [Escherichia coli TA007] gi|331036837|gb|EGI09061.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H736] gi|332344560|gb|AEE57894.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli UMNK88] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|319758210|gb|ADV70152.1| ABC-type phosphate transport system, permease component [Streptococcus suis JS14] Length = 305 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +R +L P+++++ IP + GF+ VV + +++ G G L+ +F +F + Sbjct: 113 KRGAKILQPVIELLVGIPSGVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPT 171 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +TF SL +PR E S + + WQ W + + + PG+ ++ M+ + +A Sbjct: 172 VTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALA 231 Query: 210 SEMIVVGDTVIP 221 +M+V VIP Sbjct: 232 IQMVVGNSAVIP 243 >gi|74313249|ref|YP_311668.1| glycine betaine transporter membrane protein [Shigella sonnei Ss046] gi|73856726|gb|AAZ89433.1| high-affinity transport system for glycine betaine and proline [Shigella sonnei Ss046] gi|323167147|gb|EFZ52865.1| glycine betaine/L-proline transport system permease protein proW [Shigella sonnei 53G] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|293553996|ref|ZP_06674598.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1039] gi|291601853|gb|EFF32103.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1039] Length = 574 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|167841837|ref|ZP_02468521.1| binding-protein-dependent transport systems inner membrane component [Burkholderia thailandensis MSMB43] Length = 295 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + +LF FV +LA +R VL + + +P + L +++F L G + Sbjct: 102 LLRGYALGVLFAFVLTSLAVSTRIGRDVLSMLTSMFNPLPSIALLPIALLWF-GLGTGSL 160 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + F + + +W + SMY +P L+ R++ L+G ++ + VP ++P Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGLRQIALILVPAALPS 213 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235 >gi|21226143|ref|NP_632065.1| glycine betaine transporter, permease [Methanosarcina mazei Go1] gi|20904368|gb|AAM29737.1| Glycine betaine transporter, permease protein [Methanosarcina mazei Go1] Length = 276 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 15/142 (10%) Query: 66 SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TL + +S+ ++L+ LAAKS VL PILD+MQ++P +L +++F Sbjct: 91 SMETLSLVISSAFLALVIGIPLGILAAKSDFFFNVLKPILDLMQTMPSFVYLIPALIFF- 149 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 G V G +FA+ T ++ N+ + +PR+L+EV+ +F + WQK + Sbjct: 150 --GLGNVPGMIATLVFAMPPTIRLTNL------GIRQVPRELKEVADAFGSTPWQKLVKV 201 Query: 184 GVPFSMP----GLVWNMMMSMS 201 +P ++P G+ +M+S+S Sbjct: 202 ELPAALPTIMAGVNQCIMLSLS 223 >gi|69245959|ref|ZP_00603731.1| Binding-protein-dependent transport systems inner membrane component:Substrate-binding region of ABC-type glycine betaine transport system [Enterococcus faecium DO] gi|293563167|ref|ZP_06677625.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E1162] gi|294623125|ref|ZP_06702011.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium U0317] gi|314939370|ref|ZP_07846611.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133a04] gi|314941573|ref|ZP_07848458.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133C] gi|314949600|ref|ZP_07852924.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0082] gi|314953707|ref|ZP_07856582.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133A] gi|314992163|ref|ZP_07857607.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133B] gi|314997654|ref|ZP_07862584.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133a01] gi|68195489|gb|EAN09933.1| Binding-protein-dependent transport systems inner membrane component:Substrate-binding region of ABC-type glycine betaine transport system [Enterococcus faecium DO] gi|281335146|gb|ADA62230.1| Glycine betaine ABC transport system, permease protein OpuAB / Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC [Enterococcus faecium] gi|291597494|gb|EFF28659.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium U0317] gi|291604858|gb|EFF34334.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E1162] gi|313588289|gb|EFR67134.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133a01] gi|313593266|gb|EFR72111.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133B] gi|313594291|gb|EFR73136.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133A] gi|313599632|gb|EFR78475.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133C] gi|313641355|gb|EFS05935.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133a04] gi|313644024|gb|EFS08604.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0082] Length = 575 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|333001015|gb|EGK20585.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-272] gi|333015481|gb|EGK34820.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-227] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|289567008|ref|ZP_06447409.1| ABC transporter, glycine-betaine/proline permease [Enterococcus faecium D344SRF] gi|294615264|ref|ZP_06695141.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1636] gi|294617327|ref|ZP_06696966.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1679] gi|289161209|gb|EFD09108.1| ABC transporter, glycine-betaine/proline permease [Enterococcus faecium D344SRF] gi|291591861|gb|EFF23493.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1636] gi|291596400|gb|EFF27654.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1679] Length = 575 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 155 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|256019540|ref|ZP_05433405.1| glycine betaine transporter membrane protein [Shigella sp. D9] gi|332280664|ref|ZP_08393077.1| glycine betaine/L-proline transport system permease proW [Shigella sp. D9] gi|332103016|gb|EGJ06362.1| glycine betaine/L-proline transport system permease proW [Shigella sp. D9] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|156935089|ref|YP_001439005.1| taurine transporter subunit [Cronobacter sakazakii ATCC BAA-894] gi|156533343|gb|ABU78169.1| hypothetical protein ESA_02940 [Cronobacter sakazakii ATCC BAA-894] Length = 275 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 21/186 (11%) Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IPVGI +G P + + + P +L P + PL+V + L L L IF Sbjct: 97 IGIPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGIGETSKVL-LIYLAIFA 155 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + +AG + A S + W+ ++ILPG P +TG G W+ Sbjct: 156 P---VAMSALAGVKSAQQVRIRAAQSLGASRWQLLWHVILPGALPEILTGLRIGLGVGWS 212 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVLIMCCFVL-----ALNR 571 + +E+ + T GLG ++ +S + +VVL V+ + F+L AL R Sbjct: 213 TLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVIALVAFILELGLRALTR 265 Query: 572 FL--WH 575 L WH Sbjct: 266 RLTPWH 271 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P++++ + IP L +L V++F IG E + + I+ + + S + Sbjct: 114 ILDPLIELYRPIPPLAYLPLMVIWFG-------IG-ETSKVLLIYLAIFAPVAMSALAGV 165 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + ++S S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 166 KSAQQVRIRAAQSLGASRWQLLWHVILPGALPEILTGLRIGLGVGWSTLVAAELI 220 >gi|15803198|ref|NP_289230.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 EDL933] gi|15832795|ref|NP_311568.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. Sakai] gi|168750921|ref|ZP_02775943.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168755423|ref|ZP_02780430.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168762473|ref|ZP_02787480.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168768769|ref|ZP_02793776.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168774790|ref|ZP_02799797.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168778660|ref|ZP_02803667.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168787933|ref|ZP_02812940.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168800563|ref|ZP_02825570.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|193065974|ref|ZP_03047033.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E22] gi|194427910|ref|ZP_03060456.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli B171] gi|195938432|ref|ZP_03083814.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807590|ref|ZP_03249927.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208814097|ref|ZP_03255426.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208820172|ref|ZP_03260492.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209396362|ref|YP_002272144.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|217326993|ref|ZP_03443076.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218690806|ref|YP_002399018.1| glycine betaine transporter membrane protein [Escherichia coli ED1a] gi|218701173|ref|YP_002408802.1| glycine betaine transporter membrane protein [Escherichia coli IAI39] gi|218706178|ref|YP_002413697.1| glycine betaine transporter membrane protein [Escherichia coli UMN026] gi|254794625|ref|YP_003079462.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|260845326|ref|YP_003223104.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O103:H2 str. 12009] gi|261225975|ref|ZP_05940256.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256767|ref|ZP_05949300.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291284011|ref|YP_003500829.1| Glycine betaine/L-proline ABC transporter permease protein [Escherichia coli O55:H7 str. CB9615] gi|293406175|ref|ZP_06650101.1| glycine betaine transporter membrane protein [Escherichia coli FVEC1412] gi|293412036|ref|ZP_06654759.1| glycine betaine transporter membrane protein [Escherichia coli B354] gi|298381912|ref|ZP_06991509.1| glycine betaine transporter membrane protein [Escherichia coli FVEC1302] gi|300898659|ref|ZP_07116980.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300941046|ref|ZP_07155565.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|301306005|ref|ZP_07212085.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301327382|ref|ZP_07220631.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|306812441|ref|ZP_07446639.1| glycine betaine transporter membrane protein [Escherichia coli NC101] gi|331648399|ref|ZP_08349487.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli M605] gi|331654161|ref|ZP_08355161.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli M718] gi|331658789|ref|ZP_08359731.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA206] gi|331669416|ref|ZP_08370262.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA271] gi|12517117|gb|AAG57788.1|AE005496_11 high-affinity transport system for glycine betaine and proline [Escherichia coli O157:H7 str. EDL933] gi|13363012|dbj|BAB36964.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli O157:H7 str. Sakai] gi|187769535|gb|EDU33379.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188014969|gb|EDU53091.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|189003312|gb|EDU72298.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189357321|gb|EDU75740.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189362133|gb|EDU80552.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189367256|gb|EDU85672.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189372114|gb|EDU90530.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189377180|gb|EDU95596.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|192926388|gb|EDV81023.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E22] gi|194414143|gb|EDX30419.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli B171] gi|208727391|gb|EDZ76992.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208735374|gb|EDZ84061.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208740295|gb|EDZ87977.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209157762|gb|ACI35195.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209762218|gb|ACI79421.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|209762220|gb|ACI79422.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|209762222|gb|ACI79423.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|209762224|gb|ACI79424.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|209762226|gb|ACI79425.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|217319360|gb|EEC27785.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218371159|emb|CAR18990.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218428370|emb|CAR09299.2| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|218433275|emb|CAR14175.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|222034378|emb|CAP77119.1| glycine betaine/L-proline transport system permease [Escherichia coli LF82] gi|254594025|gb|ACT73386.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257760473|dbj|BAI31970.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O103:H2 str. 12009] gi|290763884|gb|ADD57845.1| Glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O55:H7 str. CB9615] gi|291426181|gb|EFE99213.1| glycine betaine transporter membrane protein [Escherichia coli FVEC1412] gi|291468807|gb|EFF11298.1| glycine betaine transporter membrane protein [Escherichia coli B354] gi|298277052|gb|EFI18568.1| glycine betaine transporter membrane protein [Escherichia coli FVEC1302] gi|300357687|gb|EFJ73557.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300454210|gb|EFK17703.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300838716|gb|EFK66476.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300846036|gb|EFK73796.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|305854479|gb|EFM54917.1| glycine betaine transporter membrane protein [Escherichia coli NC101] gi|312947213|gb|ADR28040.1| glycine betaine transporter membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|315254454|gb|EFU34422.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|315298698|gb|EFU57952.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|320189009|gb|EFW63668.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli O157:H7 str. EC1212] gi|320640667|gb|EFX10203.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. G5101] gi|320646032|gb|EFX15009.1| glycine betaine transporter membrane protein [Escherichia coli O157:H- str. 493-89] gi|320651332|gb|EFX19763.1| glycine betaine transporter membrane protein [Escherichia coli O157:H- str. H 2687] gi|320656723|gb|EFX24611.1| glycine betaine transporter membrane protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662266|gb|EFX29663.1| glycine betaine transporter membrane protein [Escherichia coli O55:H7 str. USDA 5905] gi|320667317|gb|EFX34275.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. LSU-61] gi|323159819|gb|EFZ45791.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli E128010] gi|323188440|gb|EFZ73726.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli RN587/1] gi|323966930|gb|EGB62358.1| inner membrane transport system [Escherichia coli M863] gi|323978711|gb|EGB73793.1| inner membrane transport system [Escherichia coli TW10509] gi|324005775|gb|EGB74994.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|326338607|gb|EGD62433.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli O157:H7 str. 1044] gi|326342865|gb|EGD66633.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli O157:H7 str. 1125] gi|327251396|gb|EGE63082.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli STEC_7v] gi|330908709|gb|EGH37223.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli AA86] gi|331042146|gb|EGI14288.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli M605] gi|331047543|gb|EGI19620.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli M718] gi|331053371|gb|EGI25400.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA206] gi|331063084|gb|EGI34997.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA271] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|296127569|ref|YP_003634821.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira murdochii DSM 12563] gi|296019385|gb|ADG72622.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] Length = 275 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 17/206 (8%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V+ +T Q++L IT+ RV IIA II +P+G+ +G+ I + P + Sbjct: 70 VDPYTVQNLL-------ITLERVFRGFIIACIIGLPLGLIMGYSKPILLAVSPIINSIRQ 122 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P + PL + ++ L + L+ + ++ N I G ++ A S Sbjct: 123 VPIMAWIPL---AIVWFGLGDGPTI-FLITMSAIFPLIINTIDGVRGIDPNYINAARSMG 178 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 IILPG P ++TG A G W + I +E + + G G + E+ Sbjct: 179 ARNIDIMFDIILPGALPSFLTGCRLALGLGWMSVICAEFIA------TSKGFGFILVEAQ 232 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ P++ +++ +++R L Sbjct: 233 QRLETPKLYALMIVSAIIGFSMDRVL 258 >gi|170680258|ref|YP_001744829.1| glycine betaine transporter membrane protein [Escherichia coli SMS-3-5] gi|170517976|gb|ACB16154.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli SMS-3-5] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|86361141|ref|YP_473028.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86285243|gb|ABC94301.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 295 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 15/192 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT + V+S+ L A+S RL V+ PILD+MQ++P +L V M L Sbjct: 102 RTVSMIFVCTVLSIAIGIPIGILMARSDRLQRVVNPILDVMQTMPSFVYLIPVV---MLL 158 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV G I+AI M + + +D+ E + +F S QK + + +P Sbjct: 159 GIGKVPGLIAVVIYAI-----PPMIRLTDLGIRLVDKDVLEAADAFGTSRAQKLFKVQLP 213 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++P ++ + ++ VV + MI V G+G + AI Q ++ L Sbjct: 214 LALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGL 266 Query: 247 TMLGVIFLYDQL 258 ++G+ ++D++ Sbjct: 267 AIVGIAIIFDRV 278 >gi|26249073|ref|NP_755113.1| glycine betaine transporter membrane protein [Escherichia coli CFT073] gi|215487999|ref|YP_002330430.1| glycine betaine transporter membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|227888212|ref|ZP_04006017.1| glycine betaine transporter membrane protein [Escherichia coli 83972] gi|301019056|ref|ZP_07183267.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|312965593|ref|ZP_07779823.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 2362-75] gi|331664235|ref|ZP_08365141.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA143] gi|331674199|ref|ZP_08374959.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA280] gi|331684296|ref|ZP_08384888.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H299] gi|26109480|gb|AAN81683.1|AE016765_85 Glycine betaine/L-proline transport system permease protein proW [Escherichia coli CFT073] gi|215266071|emb|CAS10491.1| high-affinity transport system for glycine betaine and proline; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|227834852|gb|EEJ45318.1| glycine betaine transporter membrane protein [Escherichia coli 83972] gi|284922620|emb|CBG35708.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 042] gi|300399409|gb|EFJ82947.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|307554654|gb|ADN47429.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli ABU 83972] gi|312289742|gb|EFR17632.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 2362-75] gi|331058166|gb|EGI30147.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA143] gi|331068293|gb|EGI39688.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA280] gi|331077911|gb|EGI49117.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H299] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|302023877|ref|ZP_07249088.1| phosphate ABC transporter, permease protein PstC [Streptococcus suis 05HAS68] Length = 304 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +R +L P+++++ IP + GF+ VV + +++ G G L+ +F +F + Sbjct: 113 KRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPT 171 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +TF SL +PR E S + + WQ W + + + PG+ ++ M+ + +A Sbjct: 172 VTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALA 231 Query: 210 SEMIVVGDTVIP 221 +M+V VIP Sbjct: 232 IQMVVGNSAVIP 243 >gi|301050521|ref|ZP_07197397.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300297777|gb|EFJ54162.1| ABC transporter, permease protein [Escherichia coli MS 185-1] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|159906170|ref|YP_001549832.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C6] gi|159887663|gb|ABX02600.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C6] Length = 277 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%) Query: 66 SRTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TL ++ ++ +I+L+F + A+S+ + M+L P+LD+MQ++P L +L V++F Sbjct: 90 SMITLSLIITSTLIALVFGIPLGIVKARSKIVSMLLDPLLDVMQTLPSLAYLIPAVLFF- 148 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G+V G IFA+ +T + + +L EV R+F + WQ + Sbjct: 149 --GIGEVPGVIATVIFAM--PPAIKLT---ALGIEQVSGELIEVGRAFGGTSWQILTKIE 201 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ + VV + I G G+G I I+ L L A Sbjct: 202 LPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEA 254 Query: 245 --MLTMLGVIF 253 +T L VIF Sbjct: 255 GIAVTFLAVIF 265 >gi|88801194|ref|ZP_01116736.1| ABC-type proline/glycine betaine transport system, permease component [Reinekea sp. MED297] gi|88776068|gb|EAR07301.1| ABC-type proline/glycine betaine transport system, permease component [Reinekea sp. MED297] Length = 357 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 12/154 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ LS +V S+LF V A+S R ++ P+LD MQ+ P +L V+ Sbjct: 145 EESMTTLSLVVTSVLFCMVIGIPTGIGMARSDRAARIMRPVLDTMQTTPAFVYLVPVVML 204 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F G V G + IFA+ V +T + +P DL E + SF Q + Sbjct: 205 F---GIGNVPGVVVTIIFAV--PPVIRLT---NLGIRQVPEDLIEAANSFGADSKQMLFK 256 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + +P +MP ++ + ++ G VV + MI VG Sbjct: 257 VQLPLAMPTIMAGVNQTLMLGLSMVVIASMISVG 290 >gi|330998254|ref|ZP_08322079.1| glycine betaine transport system permease protein opuAB [Paraprevotella xylaniphila YIT 11841] gi|329568643|gb|EGG50444.1| glycine betaine transport system permease protein opuAB [Paraprevotella xylaniphila YIT 11841] Length = 271 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 16/159 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ ++LL A KS R +L P+LD MQ++P +L V++ Sbjct: 83 EETMQTLALVLSSTCMALLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVLF 142 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F G V GA IFA+ V +T + +P+++ E +RSF + Q + Sbjct: 143 F---GLGTVPGAFATIIFAM--PPVVRLT---GLGIRQVPKNVIEAARSFGATPRQLLFK 194 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +P ++P G+ +MM++S VV S MI G Sbjct: 195 VQLPLALPTIQTGINQTIMMALS----MVVVSAMISAGG 229 >gi|325568907|ref|ZP_08145200.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325157945|gb|EGC70101.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 574 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS++V S++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSSLV-SIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T ++ N+ + I R+L E S SF +GWQK L +P Sbjct: 155 GMVPGVFASVIFALPPTVRMTNL------GIRQISRELVEASDSFGGTGWQKLIKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + + G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTILAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|322508395|gb|ADX03849.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii 1656-2] gi|323518017|gb|ADX92398.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii TCDC-AB0715] Length = 251 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 58 SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 111 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 112 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 171 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 172 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 224 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 43/239 (17%), Positives = 102/239 (42%), Gaps = 18/239 (7%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +N+ P D++ + + + ++ + R++ V++ L LA Sbjct: 22 VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 81 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + ++L L+P L++++ IP + ++ ++ F + +E + IF F ++ + Sbjct: 82 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 133 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S S + +P ++P ++ + + M WF +V +E Sbjct: 134 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 193 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 MI GIG + + Q+ I+ M+ ++G + ++ L R V N+F Sbjct: 194 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 242 >gi|297617206|ref|YP_003702365.1| binding-protein-dependent transporters inner membrane component [Syntrophothermus lipocalidus DSM 12680] gi|297145043|gb|ADI01800.1| binding-protein-dependent transport systems inner membrane component [Syntrophothermus lipocalidus DSM 12680] Length = 250 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 19/219 (8%) Query: 41 ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100 ETT+ RD+V+ V + Q T R L+ ++S L V LA + + L Sbjct: 39 ETTM-RDLVNAV----RSAAFWQSVEATVYRGLAGFLVSCLAGAVTGFLAGFNSVVFWAL 93 Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P + ++++ P++ F+ +++F EL IF F + ++ Q + N Sbjct: 94 QPFMTVIRTTPVMSFILLALIWFRT---------ELVPIFVSFLIAFPIIFDNVVQGIKN 144 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 + R L E++R FR+ W+ + L +P +P L +M W ++A+E++ Sbjct: 145 VDRQLVEMARLFRVKPWRILFELYIPSILPFLAAGTSSAMGLTWKVIIAAEILSQ----- 199 Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 P GIG+ + A + IL + ++ + F+++ +L Sbjct: 200 PTFGIGTQMQNARIYLETARILSWTVVIVFISFVFESIL 238 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 5/145 (3%) Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 G GF + +QPF ++ P F ++++ + + +++S L+ F I Sbjct: 80 GFLAGFNSVVFWALQPFMTVIRTTPVMSF--ILLALIWFRTELVPIFVSFLIAFP---II 134 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 NV+ G E+A F + WR + +P I P+ G +A G W I + Sbjct: 135 FDNVVQGIKNVDRQLVEMARLFRVKPWRILFELYIPSILPFLAAGTSSAMGLTWKVIIAA 194 Query: 525 EVASWGHIHLRTTGLGAYIAESTEK 549 E+ S + T A I T + Sbjct: 195 EILSQPTFGIGTQMQNARIYLETAR 219 >gi|257885408|ref|ZP_05665061.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,501] gi|257821264|gb|EEV48394.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,501] Length = 571 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 95 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 150 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 151 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 204 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 205 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 244 >gi|89901332|ref|YP_523803.1| nitrate transport permease [Rhodoferax ferrireducens T118] gi|89346069|gb|ABD70272.1| nitrate transport permease [Rhodoferax ferrireducens T118] Length = 314 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W +++ RV V +A+ + IP G IG +S P LL + P + Sbjct: 116 VGWNILMSLQRVAVGFGLAAAVGIPAGFMIGRFEFLSRMFNPLIGLLRPVSPLAWLP--I 173 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + NP ++ + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 174 GLLVFKGANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKIL 231 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 P + PY +TG A G AW + +E+ + G Sbjct: 232 FPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 263 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 157 PLIGLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMIINTAVGVQRV 208 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 209 PQDYMNVARVLNLSEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 263 >gi|320180199|gb|EFW55135.1| L-proline glycine betaine ABC transport system permease protein ProW [Shigella boydii ATCC 9905] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|300310541|ref|YP_003774633.1| nitrate transporter permease [Herbaspirillum seropedicae SmR1] gi|300073326|gb|ADJ62725.1| ABC-type nitrate transporter, permease component protein [Herbaspirillum seropedicae SmR1] Length = 307 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F + P AAI++IF +W M + + + Sbjct: 150 PIISLLRPVSPLAWLPIGLLVFKSANP--------AAIWSIFICSIWPMIINTAVGVQRV 201 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +S+ W +VA+EM+ G Sbjct: 202 PQDYMNVARVLNLSEWKVLTKILFPSVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 256 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 4/150 (2%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV +A+++ IP+G IG ++ P LL + P + Sbjct: 111 WNVLASLQRVGTGFGLAALVGIPLGFAIGRVEFLARMFGPIISLLRPVSPLAWLP--IGL 168 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + NP S+ + + W ++ N G P D+ VA +++ W+ I+ P Sbjct: 169 LVFKSANPAAIWSIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKILFP 226 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530 + PY +TG + G AW + +E+ + G Sbjct: 227 SVLPYMLTGVRLSIGTAWLVIVAAEMLTGG 256 >gi|260555053|ref|ZP_05827274.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] gi|260411595|gb|EEX04892.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] Length = 284 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVV+ ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/226 (18%), Positives = 99/226 (43%), Gaps = 18/226 (7%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D++ + + + ++ + R++ V++ L LA + ++L L+P L Sbjct: 68 PLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPL 127 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++ IP + ++ ++ F + +E + IF F ++ + + + + Sbjct: 128 EVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPILLNTVHGVGAVDPR 179 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L ++S S + +P ++P ++ + + M WF +V +EMI G Sbjct: 180 LVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQH------G 233 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 IG + + Q+ I+ M+ ++G + ++ L R V N+F Sbjct: 234 IGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275 >gi|148547319|ref|YP_001267421.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|148511377|gb|ABQ78237.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] Length = 251 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 17/222 (7%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V IW +++ R+++ +++A ++ +P+G+ +G H+ + P Sbjct: 44 TLASLVELLGQGEVYGHIW---VSLKRILIGLLLALLMGVPLGLLVGSYRHLEAATTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + P + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLTATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCC--FVL-ALNRFLWHPLYLYG 581 I ++ ++ ++ E++ VL++ FVL AL R L H +++G Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDALARGL-HRRWVHG 251 >gi|320186469|gb|EFW61197.1| L-proline glycine betaine ABC transport system permease protein ProW [Shigella flexneri CDC 796-83] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 15/148 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T + +P DL E SRSF S Q + + +P +MP ++ + ++ VV + Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLALSMVVIA 282 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDL 238 MI VG G+G + I D+ Sbjct: 283 SMIAVG-------GLGQMVLRGIGRLDM 303 >gi|304405835|ref|ZP_07387493.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304345078|gb|EFM10914.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 292 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 12/188 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++FRV ++A II IP+G+ G + + I+P + + PA F PL++ V Sbjct: 103 VSIFRVTGGFLLACIIGIPLGVLAGTFKYGEAFIEPPMEFIRYMPAVAFIPLIMVWVGIG 162 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 W +++IF G + ++ V P D + + + + W+ ++LP I Sbjct: 163 E-----WAKIMLIFIGCFFQLVLMVADNVRRVPRDLLQASFTLGASRWKVIETVLLPAIQ 217 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G AW +V+E+ + +GLG I ++ + ++ +G++++ Sbjct: 218 PQLMHTLRLILGWAWTYLVVAELVA------VNSGLGYAIMKAQRYLNTDQIFVGIIVIG 271 Query: 564 CFVLALNR 571 L +R Sbjct: 272 LLGLISDR 279 >gi|254438593|ref|ZP_05052087.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198254039|gb|EDY78353.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 357 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 15/186 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452 +IASII IP+GI G ++ + P Q+ + P+V VS + + W Sbjct: 162 LIASIIAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTNDGWFEK 221 Query: 453 -----SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 ++ + + W L N G S+ D V+ + + ++LP P Sbjct: 222 SFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LARIMVAVFTI 333 Query: 568 ALNRFL 573 + FL Sbjct: 334 GIIGFL 339 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 11/129 (8%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + + +I +DL VSR +++ + K L +P ++P + + +S+ GW Sbjct: 234 SLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260 ++A+EM+ PG+G ++ + Q L I+ A+ T+ + FL D++++ Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYAL 347 Query: 261 RPMIVWSNK 269 + M +SN Sbjct: 348 QSMFTFSNS 356 >gi|193077347|gb|ABO12148.2| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii ATCC 17978] Length = 284 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/250 (18%), Positives = 108/250 (43%), Gaps = 23/250 (9%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 L F + +GI+N P D++ + + + ++ + R++ V++ Sbjct: 49 GLAQFKINLGIVNF-----SNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAA 103 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L LA + ++L L+P L++++ IP + ++ ++ F + +E + IF Sbjct: 104 LIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIF 155 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 F ++ + + + + L ++S S + + +P ++P ++ + + M Sbjct: 156 ITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGM 215 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 WF +V +EMI GIG + + Q+ I+ M+ ++G + ++ L Sbjct: 216 GTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLV 268 Query: 261 RPMIVWSNKF 270 R V N+F Sbjct: 269 R---VIGNRF 275 >gi|261209289|ref|ZP_05923681.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium TC 6] gi|260076835|gb|EEW64570.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium TC 6] Length = 571 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 95 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 150 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 151 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 204 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 205 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 244 >gi|221065520|ref|ZP_03541625.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] gi|220710543|gb|EED65911.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] Length = 268 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 12/202 (5%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + + L + WL +M RV +A+++ IP+G+ IG + + P Q+L P Sbjct: 63 AFSETLGIHWLK--SMSRVYGAFGLAALLGIPLGLVIGKNAAVRRFVDPTLQMLRPVPVT 120 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + PL + ++ + PN + L+ G + I+ N G + E A+ G Sbjct: 121 AWLPL---SMIFFGVGPNAAI-FLVFLGAFFPIVINTTFGVKSVEPRLFEAAAMLGCQGA 176 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +R ++LP P G G AW +V E+ GLGA I + Sbjct: 177 SMFRQVVLPAAMPSIFNGLRLGHGIAWFLIVVGEMTG------VPEGLGAAIMDGRMLSR 230 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 V+ G++++ +R L Sbjct: 231 TDVVIAGMVVIGFTGFVTDRLL 252 >gi|82545240|ref|YP_409187.1| glycine betaine transporter membrane protein [Shigella boydii Sb227] gi|81246651|gb|ABB67359.1| ProW [Shigella boydii Sb227] gi|332092004|gb|EGI97082.1| glycine betaine/L-proline transport system permease protein proW [Shigella boydii 3594-74] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 15/148 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T + +P DL E SRSF S Q + + +P +MP ++ + ++ VV + Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLALSMVVIA 282 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDL 238 MI VG G+G + I D+ Sbjct: 283 SMIAVG-------GLGQMVLRGIGRLDM 303 >gi|91212039|ref|YP_542025.1| glycine betaine transporter membrane protein [Escherichia coli UTI89] gi|110642804|ref|YP_670534.1| glycine betaine transporter membrane protein [Escherichia coli 536] gi|117624914|ref|YP_853857.1| glycine betaine transporter membrane protein [Escherichia coli APEC O1] gi|191171377|ref|ZP_03032926.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli F11] gi|218559670|ref|YP_002392583.1| glycine betaine transporter membrane protein [Escherichia coli S88] gi|237706700|ref|ZP_04537181.1| high-affinity transport system for glycine betaine and proline [Escherichia sp. 3_2_53FAA] gi|300990598|ref|ZP_07179248.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|91073613|gb|ABE08494.1| high-affinity transport system for glycine betaine and proline [Escherichia coli UTI89] gi|110344396|gb|ABG70633.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli 536] gi|115514038|gb|ABJ02113.1| glycine betaine/L-proline transport system permease protein P [Escherichia coli APEC O1] gi|190908311|gb|EDV67901.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli F11] gi|218366439|emb|CAR04191.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|226899740|gb|EEH85999.1| high-affinity transport system for glycine betaine and proline [Escherichia sp. 3_2_53FAA] gi|294493392|gb|ADE92148.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli IHE3034] gi|300305715|gb|EFJ60235.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|307625750|gb|ADN70054.1| glycine betaine transporter membrane protein [Escherichia coli UM146] gi|320194818|gb|EFW69447.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli WV_060327] gi|323951100|gb|EGB46976.1| inner membrane transport system [Escherichia coli H252] gi|323957109|gb|EGB52834.1| inner membrane transport system [Escherichia coli H263] gi|324014409|gb|EGB83628.1| ABC transporter, permease protein [Escherichia coli MS 60-1] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|146320961|ref|YP_001200672.1| phosphate ABC transporter permease [Streptococcus suis 98HAH33] gi|145691767|gb|ABP92272.1| ABC-type phosphate transport system, permease component [Streptococcus suis 98HAH33] Length = 303 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +R +L P+++++ IP + GF+ VV + +++ G G L+ +F +F + Sbjct: 113 KRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPT 171 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +TF SL +PR E S + + WQ W + + + PG+ ++ M+ + +A Sbjct: 172 VTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAVIFGMARAFGEALA 231 Query: 210 SEMIVVGDTVIP 221 +M+V VIP Sbjct: 232 IQMVVGNSAVIP 243 >gi|257880362|ref|ZP_05660015.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,230,933] gi|257882213|ref|ZP_05661866.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,502] gi|257891020|ref|ZP_05670673.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,410] gi|257894273|ref|ZP_05673926.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,408] gi|260562336|ref|ZP_05832850.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium C68] gi|257814590|gb|EEV43348.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,230,933] gi|257817871|gb|EEV45199.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,502] gi|257827380|gb|EEV54006.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,410] gi|257830652|gb|EEV57259.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,408] gi|260073260|gb|EEW61601.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium C68] Length = 571 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS+ VIS++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 95 TLVLLSS-VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFF---GI 150 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T + N+ + +P++L E S SF + QK + L +P Sbjct: 151 GMVPGVFASVIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTSRQKLFKLELPL 204 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + M G+ M+S+S M+V+ ++I PG+G + A++ Sbjct: 205 AKSTIMAGINQTTMLSLS----------MVVIA-SMIGAPGLGRGVLSALQ 244 >gi|257867410|ref|ZP_05647063.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC30] gi|257873741|ref|ZP_05653394.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC10] gi|257877492|ref|ZP_05657145.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC20] gi|257801466|gb|EEV30396.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC30] gi|257807905|gb|EEV36727.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC10] gi|257811658|gb|EEV40478.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC20] Length = 574 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS++V S++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSSLV-SIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T ++ N+ + I R+L E S SF +GWQK L +P Sbjct: 155 GMVPGVFASVIFALPPTVRMTNL------GIRQISRELVEASDSFGGTGWQKLIKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + + G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTILAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|281179685|dbj|BAI56015.1| glycine/betaine/proline ABC transporter permease component [Escherichia coli SE15] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|91783656|ref|YP_558862.1| sulfate ester ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91687610|gb|ABE30810.1| Putative ABC sulfate ester transporter, innermembrane subunit [Burkholderia xenovorans LB400] Length = 283 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T S Q P L+EV+R F SGWQ+ YL +P ++P L + ++ + W +V Sbjct: 163 VTLSTLQGFQQTPATLDEVARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVV 222 Query: 210 SEMIVVGD 217 E++ + Sbjct: 223 VELVASSE 230 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + + + G P EVA F +GW+ Y+ILP P TG A AW A +V Sbjct: 163 VTLSTLQGFQQTPATLDEVARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVV 222 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 E+ + + GLG I + V+ V+++ A+NR L Sbjct: 223 VELVA------SSEGLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 266 >gi|27381358|ref|NP_772887.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354525|dbj|BAC51512.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 257 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 12/179 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV +A+II +P G+ +G + + ++PF PA+ F PL++ Sbjct: 66 MTIWRVVGGFALAAIIAVPFGVLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG 125 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L LL+IF G+ + ++ V A D E A + + R ++LP Sbjct: 126 ELQ-----KLLVIFIGSVFQVILMVAVTVGATRRDLVEAAYTLGASDRGIIRRVLLPSSA 180 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 181 PEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVI 233 >gi|218547805|ref|YP_002381596.1| glycine betaine transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218355346|emb|CAQ87953.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324111312|gb|EGC05294.1| inner membrane transport system [Escherichia fergusonii B253] gi|325496272|gb|EGC94131.1| glycine betaine transporter membrane protein [Escherichia fergusonii ECD227] Length = 354 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|73669863|ref|YP_305878.1| glycine betaine/L-proline ABC transporter permease [Methanosarcina barkeri str. Fusaro] gi|72397025|gb|AAZ71298.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina barkeri str. Fusaro] Length = 274 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 21/175 (12%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 T +LS+ +++L+ L+AK+ L +L P+LD MQ++P +L +++F Sbjct: 91 ETLALVLSSTLLALIIGIPLGILSAKNTTLSSILKPVLDFMQTMPPFVYLIPALIFF--- 147 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYL 183 +L + ++ + V+ M ++ + + +P +L EV+ SF + WQK + Sbjct: 148 --------QLGNVPSMIATVVFAMPPAIRLTNLGIRQVPIELTEVADSFGSTSWQKLSKV 199 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P ++P + M+G ++ S +VV +I G+G + L I+ D+ Sbjct: 200 ELPVALPTI-------MAGVNQCIMLSLSMVVIAAMIGARGLGYQVLLGIQRVDI 247 >gi|310830348|ref|YP_003965448.1| ABC proline/glycine betaine transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753254|gb|ADO44397.1| ABC proline/glycine betaine transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 303 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 26/177 (14%) Query: 66 SRTTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TL M++ +++++ L A+S R ++ P+LD+MQ++P +L VV F Sbjct: 108 SMITLSMVTVCTLVAVIIGLPIGILTARSDRAQRIITPVLDVMQTMPSFVYLIPVVVIF- 166 Query: 125 NLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 GKV G I+A+ ++ N+ + + R+ E + +F S QK W + Sbjct: 167 --GIGKVPGMIAVVIYAMPPMIRLTNLGIRL------VDREAIEAADAFGSSERQKLWNV 218 Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 +P ++P G+ +MM++S VV + M+ VG G+G + AI Q Sbjct: 219 QLPLALPTLMTGVNQTIMMALS----MVVVASMVGVG-------GLGRNVLQAINNQ 264 >gi|300709406|ref|YP_003735220.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3] gi|299123089|gb|ADJ13428.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3] Length = 274 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%) Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 + RVVV +++A+ IP+G+ IG + P ++ P + P+ + + Sbjct: 80 AAFSAMRVVVAMVLATATAIPLGLVIGASRRWEDALFPALEVFRPVPPVAWVPIALLLMP 139 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + + ++ G + IL N I G +++ A S +R++I P Sbjct: 140 TFRSG----VIFVVFLGAFFPILVNTIEGVGTVDDEYLRAAESLGADSREVFRHVIFPAT 195 Query: 503 FPYYVTGAITACGGAWNASIVSE 525 P VTG T G AW + +E Sbjct: 196 LPSIVTGVSTGVGLAWITVVAAE 218 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 30/160 (18%), Positives = 69/160 (43%), Gaps = 8/160 (5%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 P+T ++ Q+A+ + +R++ AMV++ + SRR L P L++ + +P Sbjct: 68 PMTGSGATIYQHAAFSAMRVVVAMVLATATAIPLGLVIGASRRWEDALFPALEVFRPVPP 127 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 + ++ ++ G IF +F + + + + + + + + S Sbjct: 128 VAWVPIALLLMPTFRSG--------VIFVVFLGAFFPILVNTIEGVGTVDDEYLRAAESL 179 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + F ++ P ++P +V + + W VVA+EM Sbjct: 180 GADSREVFRHVIFPATLPSIVTGVSTGVGLAWITVVAAEM 219 >gi|300087495|ref|YP_003758017.1| binding-protein-dependent transporter inner membrane component [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527228|gb|ADJ25696.1| binding-protein-dependent transport systems inner membrane component [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 304 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 15/142 (10%) Query: 66 SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF- 123 + TTL + L+A++ + LAA+S + +L P+LD MQ+IP +L V+ F Sbjct: 92 TMTTLSLVLAALIFCAIVGIPLGILAARSDKFAGILRPLLDAMQTIPAFVYLVPVVMLFG 151 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + L PG L A+ + +T + +P+D+ E RSF + Q + + Sbjct: 152 VGLVPG------LIAVIVFALPPIIRLT---DLGIRQVPQDVVEAGRSFGGTNNQILFNI 202 Query: 184 GVPFSMP----GLVWNMMMSMS 201 +P +MP GL +M++MS Sbjct: 203 QIPLAMPTIMAGLNQTLMLAMS 224 >gi|24112343|ref|NP_706853.1| taurine transport system permease protein [Shigella flexneri 2a str. 301] gi|24051208|gb|AAN42560.1| similar to taurine transport system permease protein [Shigella flexneri 2a str. 301] Length = 217 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 88/179 (49%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 55 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 106 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 107 GLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWL------TLIVAETISANS 160 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ TT Sbjct: 161 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKETT 216 >gi|326386854|ref|ZP_08208469.1| binding-protein-dependent transport systems inner membrane component [Novosphingobium nitrogenifigens DSM 19370] gi|326208657|gb|EGD59459.1| binding-protein-dependent transport systems inner membrane component [Novosphingobium nitrogenifigens DSM 19370] Length = 260 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L + I + V A LA SRR + PI+ I ++IP L +V+F K Sbjct: 69 RVLFGLAIGVTTGIVLALLAGLSRRGEAAVDPIMQIKRTIPTLALTPLFIVWFGIGETPK 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V A++F ++ +++ + + L E +RSF LS + W++ +P ++P Sbjct: 129 VALIAFASMFPVY--------LNLFSGIRGVDARLVEGARSFGLSQAELVWHVILPGALP 180 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 L+ + S+S +V +E I Sbjct: 181 SLLVGLRYSLSIAILVLVVAEQI 203 >gi|292489868|ref|YP_003532758.1| Taurine transport permease tauC [Erwinia amylovora CFBP1430] gi|292900910|ref|YP_003540279.1| taurine ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200758|emb|CBJ47891.1| taurine ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291555305|emb|CBA23627.1| Taurine transport permease protein tauC [Erwinia amylovora CFBP1430] gi|312174051|emb|CBX82304.1| Taurine transport permease protein tauC [Erwinia amylovora ATCC BAA-2158] Length = 275 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I +P+GI +G + + P +L P + PL+V Sbjct: 81 AASLTRMVIALLAAVVIGVPIGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L L L IF + + +AG + A S + W+ +++LPG Sbjct: 141 GETSKIL-LIYLAIFAP---VTMSALAGVKSARQVRLRAARSLGASRWQVLWFVVLPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ + Sbjct: 197 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIATIA 250 Query: 564 CFVLALN 570 AL Sbjct: 251 LIAFALE 257 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 8/161 (4%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 PI +L Q+ + + RM+ A++ +++ L + L +L P++++ + +P Sbjct: 68 PIGFMDATLWQHLAASLTRMVIALLAAVVIGVPIGILMGLNDTLRGILDPLIELYRPVPP 127 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 L +L V++F IG E + I I+ + +T S + + + +RS Sbjct: 128 LAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTMSALAGVKSARQVRLRAARSL 179 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 180 GASRWQVLWFVVLPGALPEILTGIRIGLGVGWSTLVAAELI 220 >gi|78060763|ref|YP_367338.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965313|gb|ABB06694.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit [Burkholderia sp. 383] Length = 247 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 21/182 (11%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 LA+ S + L+P + +QS+P + +V+F + K+ A L A F I + + Sbjct: 77 LASASNLVRRTLLPFVTALQSMPKIALAPLLIVWFGYGFASKLAAAVLFAFFPIVVATM- 135 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 L +PR L+E R+ S FW+L +P ++P L+ + ++M + Sbjct: 136 -------GGLAGVPRHLDEHFRALGASAAHTFWHLRLPAALPALMDGLKIAMP------L 182 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQD----LLAILYAMLTMLGVIFLYDQLLFRPMI 264 A +VG+ + G+G I A AIL M+T L ++F Y + Sbjct: 183 AVIGAIVGEFIGAEAGLGHLIVFATSNAQTPLCFAAIL--MVTALAMLF-YGAVELVSRA 239 Query: 265 VW 266 VW Sbjct: 240 VW 241 >gi|89895481|ref|YP_518968.1| hypothetical protein DSY2735 [Desulfitobacterium hafniense Y51] gi|89334929|dbj|BAE84524.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 255 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 22/249 (8%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--SRTTLRMLSAMV 77 + LL+F++VI + +L VP + I + S YA T R+L+ + Sbjct: 13 YKLLSFLMVISLWKVLTLHFSPLIVPTMGSVLAEIHKILTSPDLYAMIPLTAGRLLAGLS 72 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 + + V L ++ VL P++ IMQ++P + ++ +V+F + GK Sbjct: 73 LGVSLGLVLGILMGNFSQVKGVLSPLVGIMQTVPPVSWVVLALVWFG--FNGK------P 124 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 A+F + S + +T ++ I ++L E++ +R S ++ ++ +P +P Sbjct: 125 AVFIVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQ 184 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLA--ILYAMLTMLGVI 252 +++ GW V +E++ D GIG I L ++ + ++A IL +L L Sbjct: 185 IALGSGWKIAVMAEVLTTSD------GIGGMIKLGRLNVEPESIIAWSILVVLLFYLS-D 237 Query: 253 FLYDQLLFR 261 FL + LFR Sbjct: 238 FLIGKFLFR 246 Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++I T I NV AG + E+AS + + + R++ILP I PY+ + A Sbjct: 128 IVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQIAL 187 Query: 515 GGAWNASIVSEV 526 G W ++++EV Sbjct: 188 GSGWKIAVMAEV 199 >gi|289809489|ref|ZP_06540118.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 243 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 91 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIIRL 145 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 146 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 198 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 199 VVIASMIAVG-------GLGQMVLRGIGRLDM 223 >gi|193071017|ref|ZP_03051945.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E110019] gi|192955675|gb|EDV86150.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E110019] Length = 354 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|162452310|ref|YP_001614677.1| nitrate/nitrite ABC transporter membrane protein [Sorangium cellulosum 'So ce 56'] gi|161162892|emb|CAN94197.1| nitrate/nitrite ABC transporter membrane protein [Sorangium cellulosum 'So ce 56'] Length = 265 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ I++ + L +L +V F P A +F I +W + + +I Sbjct: 110 PIIQILRPVSPLAWLPLGLVLFQKPDP--------AGVFTIAMCSMWPTVLNTALGVRSI 161 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P+D V+R RLS + + + +P ++P + +S+ W +VA EM+ Sbjct: 162 PQDYMNVARVLRLSRMKTLFKVQLPAALPYMFTGFRLSLGIAWLVIVAVEMLTGS----- 216 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 PG+G ++ I+ ++T+ V FL D L+ Sbjct: 217 -PGVGGFLWQEYNSLIYEHIILCIITIGVVGFLLDALM 253 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 18/214 (8%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 Q +L W ++ RV +A ++ P+G ++G S P Q+L + Sbjct: 67 QGILRFTWY---SLQRVAKGYTLAILLGTPIGFFLGASRLFKSSFDPIIQILRPVSPLAW 123 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL V + +P ++ M + W + N G + P D+ VA ++ + Sbjct: 124 LPL--GLVLFQKPDPAGVFTIAMC--SMWPTVLNTALGVRSIPQDYMNVARVLRLSRMKT 179 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + LP PY TG + G AW + E+ + + G+G ++ + + Sbjct: 180 LFKVQLPAALPYMFTGFRLSLGIAWLVIVAVEMLT------GSPGVGGFLWQ-----EYN 228 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++ +I+C + + FL L R L+L Sbjct: 229 SLIYEHIILCIITIGVVGFLLDALMSLVERRLKL 262 >gi|115523285|ref|YP_780196.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] gi|115517232|gb|ABJ05216.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] Length = 299 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI ++++IP L +L + F + P +AIF IF + +W + + + Sbjct: 140 LDPIFQVLRTIPPLAWLPLALAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIR 191 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ RL+ + FW + +P + P + + + + W ++A+EM++ G Sbjct: 192 NIPQDYRNVAAVVRLNPLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV-- 249 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A+ + + F+ D+ + Sbjct: 250 ----GIGFFIWDAWNSSHISEIILALFYVGIIGFVLDRAI 285 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 7/120 (5%) Query: 453 SLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 ++ +IF T W I+ N G P D++ VA+ + ++ I+LP PY TG Sbjct: 170 AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPLEFFWKIMLPSAAPYIFTGLR 229 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 G +W A I +E+ G G+G +I ++ E++L + + L+R Sbjct: 230 IGVGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILALFYVGIIGFVLDR 283 >gi|320173466|gb|EFW48665.1| L-proline glycine betaine ABC transport system permease protein ProW [Shigella dysenteriae CDC 74-1112] Length = 354 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|296127455|ref|YP_003634707.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] gi|296019271|gb|ADG72508.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] Length = 242 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 14/160 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + +R+ +A ++S L F++ L+ L +L+PI++ +++IP + + V++F N Sbjct: 59 SIVRVFAAFILSFLSAFLFGVLSGIFLPLRYILMPIINFIRTIPTIPLILVAVIWFDN-- 116 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 I + IF I + N + N+ ++L E+S S+ +S + L +P+ Sbjct: 117 DTVPIFVSMLVIFPIIYDAITN-------GIINVDKNLIEMSLSYNVSLKNQIINLYIPY 169 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 P ++ + SM W ++A+E++ +P GIGS Sbjct: 170 IKPYVLTALSQSMGITWKSILAAEIL-----ALPSFGIGS 204 >gi|239813121|ref|YP_002942031.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239799698|gb|ACS16765.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 263 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R++ ++AS+ + +G IG P + + +QP + + PA+ PL +S + Sbjct: 73 TVGRMLQGWLLASLFGVLLGAAIGVSPAVRAWVQPTLEFIRPLPASALLPL---AISIFG 129 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LNP + L ++ FG W +L + G +A EVA ++ + + LP P Sbjct: 130 LNPGMVL-FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAAFVWKMGLPNAMPD 188 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G A +I VA G + +GLG I + ++ G++++ Sbjct: 189 ILAGMRLAL------TIALIVAVVGEMIASQSGLGQAILLAARAFRASDLFAGIVLLGLI 242 Query: 566 VLALNRFL 573 A N L Sbjct: 243 GFASNALL 250 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 22/200 (11%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + T RML +++ LF + S + + P L+ ++ +P L + F Sbjct: 69 FTQATVGRMLQGWLLASLFGVLLGAAIGVSPAVRAWVQPTLEFIRPLPASALLPLAISIF 128 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 L PG V+ F + +W + + + L EV+R ++S W + Sbjct: 129 -GLNPGMVL-------FVVAFGAMWPVLLATVHGFAAVEPRLAEVARCLQMSRAAFVWKM 180 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQDLLA 240 G+P +MP ++ M ++++ +A + VVG+ + G+G I A A + D Sbjct: 181 GLPNAMPDILAGMRLALT------IALIVAVVGEMIASQSGLGQAILLAARAFRASD--- 231 Query: 241 ILYAMLTMLGVI-FLYDQLL 259 L+A + +LG+I F + LL Sbjct: 232 -LFAGIVLLGLIGFASNALL 250 >gi|157159068|ref|YP_001463988.1| glycine betaine transporter membrane protein [Escherichia coli E24377A] gi|187731166|ref|YP_001881570.1| glycine betaine transporter membrane protein [Shigella boydii CDC 3083-94] gi|191167100|ref|ZP_03028921.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli B7A] gi|209920122|ref|YP_002294206.1| glycine betaine transporter membrane protein [Escherichia coli SE11] gi|218555226|ref|YP_002388139.1| glycine betaine transporter membrane protein [Escherichia coli IAI1] gi|218696275|ref|YP_002403942.1| glycine betaine transporter membrane protein [Escherichia coli 55989] gi|260856789|ref|YP_003230680.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O26:H11 str. 11368] gi|293448996|ref|ZP_06663417.1| glycine betaine transporter membrane protein [Escherichia coli B088] gi|300815919|ref|ZP_07096143.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300916826|ref|ZP_07133530.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|309795137|ref|ZP_07689556.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|331678656|ref|ZP_08379330.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H591] gi|157081098|gb|ABV20806.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E24377A] gi|187428158|gb|ACD07432.1| glycine betaine/L-proline ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|190902882|gb|EDV62610.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli B7A] gi|209913381|dbj|BAG78455.1| glycine/betaine/proline ABC transporter permease component [Escherichia coli SE11] gi|218353007|emb|CAU98825.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218361994|emb|CAQ99600.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|257755438|dbj|BAI26940.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O26:H11 str. 11368] gi|291322086|gb|EFE61515.1| glycine betaine transporter membrane protein [Escherichia coli B088] gi|300415892|gb|EFJ99202.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300531848|gb|EFK52910.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|308121108|gb|EFO58370.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|320198430|gb|EFW73032.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli EC4100B] gi|323154889|gb|EFZ41081.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli EPECa14] gi|323183204|gb|EFZ68601.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 1357] gi|323946350|gb|EGB42379.1| inner membrane transport system [Escherichia coli H120] gi|324020307|gb|EGB89526.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324120037|gb|EGC13914.1| inner membrane transport system [Escherichia coli E1167] gi|331073486|gb|EGI44807.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H591] Length = 354 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|156932792|ref|YP_001436708.1| glycine betaine transporter membrane protein [Cronobacter sakazakii ATCC BAA-894] gi|156531046|gb|ABU75872.1| hypothetical protein ESA_00588 [Cronobacter sakazakii ATCC BAA-894] Length = 356 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 173 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPVVRL 227 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E +RSF S Q + + +P +MP G+ +M+++S Sbjct: 228 TI---LGINQVPEDLIEAARSFGSSPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 280 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 281 VVIASMIAVG-------GLGQMVLRGIGRLDM 305 >gi|332687053|ref|YP_004456827.1| glycine betaine ABC transporter permease OpuAB/ glycine betaine ABC transporter glycine betaine-binding protein OpuAC [Melissococcus plutonius ATCC 35311] gi|332371062|dbj|BAK22018.1| glycine betaine ABC transport system, permease protein OpuAB/ glycine betaine ABC transport system, glycine betaine-binding protein OpuAC [Melissococcus plutonius ATCC 35311] Length = 293 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 26/182 (14%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P TL ++S+ IS++ L AK ++ ++ PILD MQ++P +L V Sbjct: 89 PDLMDTLTLVLVSSF-ISIVIGVPLGILMAKYNKVQTIITPILDFMQTMPGFVYLIPAVA 147 Query: 122 YFMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +F G V G + IFA+ T + N+ + +P++L E S SF + WQK Sbjct: 148 FF---GIGIVPGVFASIIFALPPTVRFTNL------GIRQVPKELVEASDSFGSTNWQKL 198 Query: 181 WYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + L +P + M G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 199 FKLELPLAKSTIMAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQRA 247 Query: 237 DL 238 + Sbjct: 248 QV 249 >gi|169796004|ref|YP_001713797.1| nitrate ABC transporter, membrane protein [Acinetobacter baumannii AYE] gi|213157262|ref|YP_002319307.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii AB0057] gi|215483461|ref|YP_002325678.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB307-0294] gi|301344714|ref|ZP_07225455.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB056] gi|301510320|ref|ZP_07235557.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB058] gi|301596302|ref|ZP_07241310.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB059] gi|169148931|emb|CAM86806.1| putative transport protein (ABC superfamily, membrane); putative nitrate ABC transporter, membrane [Acinetobacter baumannii AYE] gi|213056422|gb|ACJ41324.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii AB0057] gi|213986090|gb|ACJ56389.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB307-0294] Length = 284 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 43/239 (17%), Positives = 103/239 (43%), Gaps = 18/239 (7%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +N+ P D++ + + + ++ + R++ V++ L LA Sbjct: 55 VNLGFVNFSNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 114 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + ++L L+P L++++ IP + ++ ++ F + +E + IF F ++ + Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 166 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S S + + +P ++P ++ + + M WF +V +E Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 MI GIG + + Q+ I+ M+ ++G + ++ L R V N+F Sbjct: 227 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275 >gi|319794681|ref|YP_004156321.1| nitrate ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597144|gb|ADU38210.1| nitrate ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 312 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 53/245 (21%), Positives = 96/245 (39%), Gaps = 38/245 (15%) Query: 318 RTLGVIRFH-------FPENFLQLCSNQRVSYMLDIFWFCVVCGVA----IGIAWQ---- 362 R GV R FP+ + QR L FW V+ +A + + W+ Sbjct: 23 RGEGVPRIEAAPHPNPFPKG--EREQKQRTPIDLRAFWMRVLPPLAGFGLLLLIWELVAM 80 Query: 363 --SIGYIVNHFTYQDVLYVI---------------WLGCITMFRVVVLIIIASIIWIPVG 405 + G+ T+Q L V W ++ RV + +A+++ IP G Sbjct: 81 KSTTGFPTPLATWQQALTVFSDPFYSKGPNDQGVGWNVLSSLQRVALGFGLAALVGIPAG 140 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IG ++ P L+ + P + + + NP ++ + + W ++ Sbjct: 141 FAIGRFEFLARMFNPLISLMRPVSPLAWLP--IGLLVFKGANPAAIWTIFIC--SIWPMV 196 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N G P+D+ VA +++ W+ I+ P + PY +TG A G AW + +E Sbjct: 197 INTAVGVQRVPSDYMNVAKVLNLSEWKILTKILFPAVLPYMLTGVRLAVGTAWLVIVAAE 256 Query: 526 VASWG 530 + + G Sbjct: 257 MLTGG 261 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +M+ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 155 PLISLMRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 206 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P D V++ LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 207 PSDYMNVAKVLNLSEWKILTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 261 >gi|170738745|ref|YP_001767400.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168193019|gb|ACA14966.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 285 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 10/167 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A + +P+G+ IG P + + P Q+L P + PL + + L P L Sbjct: 103 LAVLAALPLGLLIGRVPLVRQLLDPTFQILRPVPVTAWLPL---AMILFGLGPR-SACFL 158 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + IL N + G + E A+ G + ++LP P TG G Sbjct: 159 VFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCRGSAQFTQVVLPAALPSIFTGLRLGLG 218 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 AW +V E+ TGLGA I E+ + V+ G++++ Sbjct: 219 FAWVVIVVGEMTGV------PTGLGAMIMEARQLSRTEIVICGMVVI 259 >gi|167033283|ref|YP_001668514.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166859771|gb|ABY98178.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 251 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 14/182 (7%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+G+ +G H+ + P Q L + P+VV + P + L+ F W Sbjct: 81 PLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALW 136 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 IL N AG + +++ S T W +I+PG+ + +TG A G W + Sbjct: 137 PILLNTAAGVRQLDARWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLV 196 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC--FVL-ALNRFLWHPLYL 579 E+ + GLG +I ++ ++ ++ E++ VL++ FVL AL R L H ++ Sbjct: 197 PCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDALARGL-HRRWV 249 Query: 580 YG 581 +G Sbjct: 250 HG 251 >gi|307314433|ref|ZP_07594038.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|306906001|gb|EFN36522.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|315061959|gb|ADT76286.1| glycine betaine transporter subunit [Escherichia coli W] gi|323377460|gb|ADX49728.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli KO11] Length = 354 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|196052748|gb|ACG69439.1| ABC transporter inner membrane subunit protein [Pseudomonas pseudoalcaligenes] Length = 280 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 9/129 (6%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF--SMPG 191 ++ +AIF IF VW M + + + RD V+R+ LS + + + +P +MP Sbjct: 148 SQTSAIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVILPARRAMPT 207 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 ++ M +S+ W +VA EM+V G GIG Y+ +L ++++++L M+GV Sbjct: 208 ILTGMRISVGIAWLVIVAPEMLVGGT------GIGYYVWNEWNNLNLASVIFSIL-MIGV 260 Query: 252 IFLYDQLLF 260 + + LL Sbjct: 261 VGMLLDLLL 269 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 14/191 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ ++A+++ IPV IG P + + PF Q+L + PL + + Sbjct: 90 SLYRVLTGYLLAALVAIPVSFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIKDSQ 149 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG--I 502 + ++ +IF + W +L N G + D+ VA + ++ R +ILP Sbjct: 150 TS-----AIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVILPARRA 204 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG + G AW + E+ G TG+G Y+ + V+ +L++ Sbjct: 205 MPTILTGMRISVGIAWLVIVAPEMLVGG------TGIGYYVWNEWNNLNLASVIFSILMI 258 Query: 563 CCFVLALNRFL 573 + L+ L Sbjct: 259 GVVGMLLDLLL 269 >gi|26990346|ref|NP_745771.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida KT2440] gi|24985304|gb|AAN69235.1|AE016558_5 sulfonate ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 251 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 17/222 (7%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V IW +++ R+++ +++A ++ +P+G+ +G H+ + P Sbjct: 44 TLASLVELLGQGEVYGHIW---VSLKRILIGLLLALLMGVPLGLLVGSYRHLEAVTTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + P + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCC--FVL-ALNRFLWHPLYLYG 581 I ++ ++ ++ E++ VL++ FVL AL R L H +++G Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDALARGL-HRRWVHG 251 >gi|325922412|ref|ZP_08184181.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Xanthomonas gardneri ATCC 19865] gi|325547109|gb|EGD18194.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Xanthomonas gardneri ATCC 19865] Length = 284 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 25/192 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ I + + + +G+ +G + I P Q L A P+ + PL++ Sbjct: 80 SVLRVLAGFAIGAGLGLLIGVGVGLSRWLEQLIDPSFQALRAVPSLAWVPLLL------- 132 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW+ + L+ G + + V++G E+ S+ ++ R R I+ Sbjct: 133 ----LWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRIL 188 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG T+ AW + +E+ + T GLG +++ E S P++V+G Sbjct: 189 LPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRET-SRPDIVIG 241 Query: 559 VLIMCCFVLALN 570 +++ + L+ Sbjct: 242 AIVLLALLGKLS 253 >gi|260432661|ref|ZP_05786632.1| binding-protein-dependent transport systems inner membrane component [Silicibacter lacuscaerulensis ITI-1157] gi|260416489|gb|EEX09748.1| binding-protein-dependent transport systems inner membrane component [Silicibacter lacuscaerulensis ITI-1157] Length = 529 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 9/155 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII-----WIPVGIWIGFRPHI 414 AW++ G V FT + Y+ LG + V ++ A+++ IP+GIW G Sbjct: 311 AWRAAGPRVAIFTAASLAYIALLGYWDVAMETVALVGAAVLLCVTFGIPLGIWFGKSKRA 370 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 +P L+ PA V+ + ++++ + +IFG I + G Sbjct: 371 YRAAEPVLDLMQTLPAFVYL---IPIIAFFGTGNPPGILATIIFGMPPVIRLTAL-GMRG 426 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P KE A +F + W+ + + +P P +TG Sbjct: 427 VPESIKEAAVAFGASKWQLLKDVEIPLALPSIMTG 461 >gi|148656880|ref|YP_001277085.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] gi|148568990|gb|ABQ91135.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] Length = 275 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 14/188 (7%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P ++ + L +L ++ + T LS I+L + L A++R VL P+L Sbjct: 63 PTLVIQRLATELAGETLQRHITITLSAALSGFSIALALSLSLGYLLARTRTFDRVLTPLL 122 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 Q++PI+ V++ +V+ A L F I ++ T ++S +PR+ Sbjct: 123 AASQAVPIVAVAPLIVLWVGVGLESRVLVATLVTFFPILSA-----TIVAFRS---VPRE 174 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L +++R + W Y+ P ++PG+ + ++ +A+ VVG+ + G Sbjct: 175 LIDMARISGANRWHLLRYVEAPLALPGIFGGVKAGLA------LATTGAVVGEFIGGRDG 228 Query: 225 IGSYIALA 232 +G+ I +A Sbjct: 229 LGALINIA 236 >gi|152969527|ref|YP_001334636.1| alkanesulfonate transporter permease subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893997|ref|YP_002918731.1| alkanesulfonate transporter permease subunit [Klebsiella pneumoniae NTUH-K2044] gi|262040961|ref|ZP_06014183.1| aliphatic sulfonates ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330013856|ref|ZP_08307813.1| putative aliphatic sulfonates transport permease protein SsuC [Klebsiella sp. MS 92-3] gi|150954376|gb|ABR76406.1| putative ABC transporter [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546313|dbj|BAH62664.1| putative aliphatic sulfonates transporter permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041655|gb|EEW42704.1| aliphatic sulfonates ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328533327|gb|EGF60074.1| putative aliphatic sulfonates transport permease protein SsuC [Klebsiella sp. MS 92-3] Length = 263 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 102/220 (46%), Gaps = 23/220 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I + ++ SR +L + +++++P L + +++ Sbjct: 60 QHLAISSWRALVGFAIGGSIGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + + + NI R L E++RS+ LSG+ F + Sbjct: 120 FGIDETAKIFLVSLGTLFPIY--------INTWHGIRNIDRGLVEMARSYGLSGFALFRH 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VILPGALPSVMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 ILYA+L L + QLL R + W+ + L+ Sbjct: 225 VVAIILYAILGKLADV--CAQLLERLWLRWNPAYHLQEAN 262 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 21/205 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R +V I I + +G+ G + Q+L P PLV+ + Sbjct: 63 AISSWRALVGFAIGGSIGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + L+ GT + I N G E+A S+ ++G+ +R++ILPG Sbjct: 120 FGIDETAKI-FLVSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV------- 556 P + G A G W IV+E S G+G Y+A + + +VV Sbjct: 179 PSVMVGVRFALGLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTDVVVVAIILY 231 Query: 557 --LGVLIMCCFVLALNRFL-WHPLY 578 LG L C L +L W+P Y Sbjct: 232 AILGKLADVCAQLLERLWLRWNPAY 256 >gi|260869357|ref|YP_003235759.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O111:H- str. 11128] gi|257765713|dbj|BAI37208.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O111:H- str. 11128] gi|323180099|gb|EFZ65651.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 1180] Length = 354 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|218261441|ref|ZP_03476256.1| hypothetical protein PRABACTJOHN_01922 [Parabacteroides johnsonii DSM 18315] gi|218224016|gb|EEC96666.1| hypothetical protein PRABACTJOHN_01922 [Parabacteroides johnsonii DSM 18315] Length = 271 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 16/154 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ +I+LL ++ + V+ P+LD+MQ++P +L V++F Sbjct: 87 QTVALVLSSTIIALLLGVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYLIPAVLFF--- 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P D+ E +RSF + Q + + +P Sbjct: 144 GLGPVPGAFATVIFAM--PPVVRLT---DLGIRQVPEDIVEATRSFGATSGQLLFKVQLP 198 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 ++P G+ +MM++S VV + MI G Sbjct: 199 LALPTIMAGVNQTIMMALS----MVVIAAMISAG 228 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 4/115 (3%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 IIA ++ +P+GIW G + I+P L+ PA V+ + V ++ L P Sbjct: 97 IIALLLGVPLGIWTGRNDKAAKVIRPVLDLMQTMPAFVYL---IPAVLFFGLGPVPGAFA 153 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 +IF + + G P D E SF T + + LP P + G Sbjct: 154 TVIFAMPPVVRLTDL-GIRQVPEDIVEATRSFGATSGQLLFKVQLPLALPTIMAG 207 >gi|308186280|ref|YP_003930411.1| Sulfonate transport permease protein ssuC [Pantoea vagans C9-1] gi|308056790|gb|ADO08962.1| Sulfonate transport permease protein ssuC [Pantoea vagans C9-1] Length = 263 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 23/221 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I + + S+ +L + +++++P L + +++ Sbjct: 60 QHLAISSWRALIGFSIGGSIGLILGLITGTSKTGERLLDTSVQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + Y + NI R L E++RS+ LSGW F Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIRNIDRGLVEMARSYGLSGWSLFIQ 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VILPGALPNIMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 ILYA+L L + LL R + W ++L+ Sbjct: 225 VVAIILYALLGKLADVAAL--LLERVWLRWHPAYQLKEENA 263 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 21/205 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R ++ I I + +G+ G + Q+L P PLV+ + Sbjct: 63 AISSWRALIGFSIGGSIGLILGLITGTSKTGERLLDTSVQMLRNVPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G E+A S+ ++GW + +ILPG Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S G+G Y+A + + +VV+ +I+ Sbjct: 179 PNIMVGVRFALGLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTDVVVVAIILY 231 Query: 564 CFV--------LALNR--FLWHPLY 578 + L L R WHP Y Sbjct: 232 ALLGKLADVAALLLERVWLRWHPAY 256 >gi|302059728|ref|ZP_07251269.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 282 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 16/170 (9%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFFIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ KV+ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 EV + + S ++ + +P ++PGL + MS W F+VA+E+I Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAA 223 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVLSGFFIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + AW + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|291617213|ref|YP_003519955.1| NrtB [Pantoea ananatis LMG 20103] gi|291152243|gb|ADD76827.1| NrtB [Pantoea ananatis LMG 20103] Length = 312 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 158 PIIALLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMIINTAEGVQRI 209 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 210 PQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 264 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP G +G ++ P LL + P + + + Sbjct: 124 SLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWLP--IGLLLFQR 181 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ W R I+ P + P Sbjct: 182 AEPAS--SWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTIMRRILFPAVLPA 239 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 240 VLTGVRLSIGIAWLVIVAAEMLTGG 264 >gi|323976150|gb|EGB71243.1| inner membrane transport system [Escherichia coli TW10509] Length = 275 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 83 SLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRTQVLWFVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563 +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIASI 252 Query: 564 CFVL-----ALNRFL--WH 575 F+L AL R L WH Sbjct: 253 AFLLELGLRALQRRLTPWH 271 >gi|323965317|gb|EGB60775.1| inner membrane transport system [Escherichia coli M863] gi|327254683|gb|EGE66299.1| taurine transport system permease protein tauC [Escherichia coli STEC_7v] Length = 275 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ +I A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALIAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|313498427|gb|ADR59793.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas putida BIRD-1] Length = 251 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 17/222 (7%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V IW +++ R++V +++A ++ +P+G+ +G H+ + P Sbjct: 44 TLASLVELLGQGEVYGHIW---VSLKRILVGLLLALLMGVPLGLLVGSYRHLEAATTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + P + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCC--FVL-ALNRFLWHPLYLYG 581 I ++ ++ ++ E++ VL++ FVL AL R L H +++G Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDALARGL-HRRWVHG 251 >gi|307329018|ref|ZP_07608186.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] gi|306885380|gb|EFN16398.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] Length = 326 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 11/193 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +IA +I P+G+ + I + + P L + P+ + P V + LN + ++ Sbjct: 135 LIALVIATPLGLIVARVKFIRAALGPILSGLQSLPSVAWVP---PAVIWLGLNDQMMYTV 191 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ G I ++AG P F + G R+I+LP P YV G Sbjct: 192 ILL-GAVPSIANGLVAGIDQVPPLFLRAGRTLGARGLVSARHILLPAALPGYVAGLKQGW 250 Query: 515 GGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +W + + +E +A + L GLG Y+ V+LG+L++ +A+ + Sbjct: 251 AFSWRSLMAAEIIAKSPDLGL---GLGQYLENQRNNSDMAGVLLGILMILLVGIAIELLI 307 Query: 574 WHPLYLYGTRCLR 586 + P+ R LR Sbjct: 308 FAPIE---RRVLR 317 >gi|262043921|ref|ZP_06017009.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038775|gb|EEW39958.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 230 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 47 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 101 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 102 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 154 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 155 VVIASMIAVG-------GLGQIVLRGIGRLDM 179 >gi|150402039|ref|YP_001329333.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C7] gi|150033069|gb|ABR65182.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C7] Length = 277 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 18/191 (9%) Query: 66 SRTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TL ++ ++ +I+L+F + + A+S+ + +L P+LD+MQ++P L +L V++F Sbjct: 90 SMITLSLIITSTLIALIFGIPFGIVKARSKLVSTLLDPLLDVMQTLPSLAYLIPAVLFF- 148 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G+V G IFA+ + + + Q + +L EV ++F + WQ + Sbjct: 149 --GIGEVPGVIATVIFAM-PPAIKLTSLGIEQ----VSEELIEVGKAFGGTSWQILTKIE 201 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ + VV + I G G+G I I+ L L A Sbjct: 202 LPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEA 254 Query: 245 --MLTMLGVIF 253 +T L VIF Sbjct: 255 GIAVTFLAVIF 265 >gi|323694649|ref|ZP_08108813.1| ABC transporter permease [Clostridium symbiosum WAL-14673] gi|323501289|gb|EGB17187.1| ABC transporter permease [Clostridium symbiosum WAL-14673] Length = 613 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 27/193 (13%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+++VISLL + + S R +++ PILD MQ++P+ +L V++F V Sbjct: 426 VLASVVISLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAV 485 Query: 132 IGAELAAIFAI--FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 I + AI + TS + + ++ E +RSF + WQ + + +P ++ Sbjct: 486 IATTIYAIVPVIRLTS----------HGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQAL 535 Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P G+ +MM+M+ +VV ++I G+G + +++ ++ L A Sbjct: 536 PTILTGVNQTLMMAMA-----------MVVTCSMIGASGLGMEVLISVNRIEIGRGLLAG 584 Query: 246 LTMLGVIFLYDQL 258 ++ V L D+L Sbjct: 585 TAVVIVAILMDRL 597 >gi|110681288|ref|YP_684295.1| nitrate ABC transporter, permease component [Roseobacter denitrificans OCh 114] gi|109457404|gb|ABG33609.1| nitrate ABC transporter, permease component [Roseobacter denitrificans OCh 114] Length = 357 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 15/186 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452 +IASI+ IP+GI G ++ + P Q+ + P+V VS + + W Sbjct: 162 MIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTNDGWFEK 221 Query: 453 -----SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 ++ + + W L N G S+ D V+ + + ++LP P Sbjct: 222 SFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LARIMVAVFTI 333 Query: 568 ALNRFL 573 + FL Sbjct: 334 GIIGFL 339 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 11/129 (8%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + + +I +DL VSR +++ + K L +P ++P + + +S+ GW Sbjct: 234 SLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260 ++A+EM+ PG+G ++ + Q L I+ A+ T+ + FL D++++ Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYAL 347 Query: 261 RPMIVWSNK 269 + M +SN Sbjct: 348 QSMFTFSNN 356 >gi|21623830|dbj|BAC00966.1| ABC-type transporter membrane permease component [Pseudomonas putida] Length = 279 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ V ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 87 SLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ + L L IF I G A S T + R++ILP P Sbjct: 147 LS-KVLLIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGATKAQLIRHVILPSALPD 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256 Query: 566 VLALN 570 AL Sbjct: 257 AFALE 261 >gi|296132128|ref|YP_003639375.1| binding-protein-dependent transport systems inner membrane component [Thermincola sp. JR] gi|296030706|gb|ADG81474.1| binding-protein-dependent transport systems inner membrane component [Thermincola potens JR] Length = 277 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 12/189 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++RV + ++A++I IP+GI G + IQP + + PA F PLV+ Sbjct: 84 ISVYRVTMGFLLAAVIGIPLGILAGTFKFAEAAIQPLTEFIRYMPATAFIPLVMVWAGIG 143 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+IF GT + ++ V P D + + T ++ +++P + Sbjct: 144 E-----GAKILVIFIGTFFQMVLMVADNIRLVPEDLLSASYTLGATRFQVITRVLIPAMM 198 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G AW +V+E+ + +GLG I ++ + +G+L++ Sbjct: 199 PNLMDTLRLMIGWAWTYLVVAELVA------ANSGLGYSILKAQRFLKTDVIFVGILVIG 252 Query: 564 CFVLALNRF 572 L +R Sbjct: 253 ILGLLTDRL 261 >gi|251795736|ref|YP_003010467.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247543362|gb|ACT00381.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length = 272 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 106/279 (37%), Gaps = 38/279 (13%) Query: 311 NNVKKLCRTLGV--IRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVA----------- 356 NVK + R L I+ + N +L V +L + W F + G A Sbjct: 2 ENVKAVPRPLQSRRIKLNVSLNIRKLFKQSIVLILLALVWQFAPLAGFADPAFLPPFSDV 61 Query: 357 IGIAWQSI--GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 I W I G + +HF +M R + +A +I IP+G+ IG+ P Sbjct: 62 IQALWNLILSGELFHHF------------AASMIRSLSGFALALVIAIPLGLAIGWYPLA 109 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 + P +L A P+ + + + +++F W IL N IA Sbjct: 110 RELLNPVMELFRNTAALALLPVFMLILGIGETSK----IAIVLFACTWPILLNTIAAVGN 165 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 + A S +++ ++ + +ILP P TG A GA I +E+ Sbjct: 166 VDPLLIKSARSMNLSSFKLFIKVILPASVPTIFTGIRMAGTGAILVLIAAEMVG------ 219 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GLG I S PE+ G+L + L +N+ L Sbjct: 220 AKEGLGYLITYSQYNFQIPEMFAGILTIALLGLLINQGL 258 >gi|94501158|ref|ZP_01307681.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Oceanobacter sp. RED65] gi|94426734|gb|EAT11719.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Oceanobacter sp. RED65] Length = 332 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 15/205 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V ++A I IP+GI G +++ + P Q+ + P+V VS + Sbjct: 127 SLYTVFTGFLLAVSIAIPLGIATGLSKTLNTALNPIIQIFKPVSPLAWLPIVTMVVSAVY 186 Query: 446 LNPNLWL-------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + W ++ + W L N G + D V+ + + R ++ Sbjct: 187 VSDDPWFEKSFVTSAITVTLCCLWPTLINTAVGVANISEDLINVSKVLRLNWFTKVRKVV 246 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + G W I +E+ + + GLG ++ + + GS LG Sbjct: 247 LPSALPMMFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDS--LG 298 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTR 583 +++ + F+ L L R Sbjct: 299 RIMVAVITIGFIGFILDSLMLMLQR 323 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 12/174 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV---WN 149 S+ L L PI+ I + + L +L + +Y E + + + T + W Sbjct: 152 SKTLNTALNPIIQIFKPVSPLAWLPIVTMVVSAVYVSDDPWFEKSFVTSAITVTLCCLWP 211 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + NI DL VS+ RL+ + K + +P ++P + M +S+ GW ++A Sbjct: 212 TLINTAVGVANISEDLINVSKVLRLNWFTKVRKVVLPSALPMMFTGMRLSLGVGWMVLIA 271 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 +EM+ PG+G ++ + L I+ A++T+ + F+ D L+ Sbjct: 272 AEMLAQN------PGLGKFVWDEFQNGSSDSLGRIMVAVITIGFIGFILDSLML 319 >gi|323487142|ref|ZP_08092449.1| ABC transporter permease [Clostridium symbiosum WAL-14163] gi|323399545|gb|EGA91936.1| ABC transporter permease [Clostridium symbiosum WAL-14163] Length = 625 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 27/193 (13%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+++VISLL + + S R +++ PILD MQ++P+ +L V++F V Sbjct: 438 VLASVVISLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAV 497 Query: 132 IGAELAAIFAI--FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 I + AI + TS + + ++ E +RSF + WQ + + +P ++ Sbjct: 498 IATTIYAIVPVIRLTS----------HGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQAL 547 Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P G+ +MM+M+ +VV ++I G+G + +++ ++ L A Sbjct: 548 PTILTGVNQTLMMAMA-----------MVVTCSMIGASGLGMEVLISVNRIEIGRGLLAG 596 Query: 246 LTMLGVIFLYDQL 258 ++ V L D+L Sbjct: 597 TAVVIVAILMDRL 609 >gi|227818731|ref|YP_002822702.1| ABC-type proline/glycine betaine transport system, permease component [Sinorhizobium fredii NGR234] gi|36958984|gb|AAQ87409.1| Glycine betaine transport system permease protein [Sinorhizobium fredii NGR234] gi|227337730|gb|ACP21949.1| predicted ABC-type proline/glycine betaine transport system, permease component [Sinorhizobium fredii NGR234] Length = 295 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 17/169 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QVWN 149 ++S R+ L PILD+MQ++P +L V M L GKV G I+AI ++ N Sbjct: 126 SRSDRVQNALNPILDVMQTMPSFVYLIPVV---MLLGIGKVPGLIAVIIYAIPPMIRLTN 182 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + + +D+ E + +F S WQK + +P ++P L+ + ++ ++A Sbjct: 183 LGIRL------VDKDVLEAADAFGSSNWQKLKNVQMPLALPTLMAGINQTI------MMA 230 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M+V+ ++I + G+G + AI Q ++ L ++G+ ++D++ Sbjct: 231 LAMVVIA-SMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278 >gi|311278367|ref|YP_003940598.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] gi|308747562|gb|ADO47314.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] Length = 354 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|220904097|ref|YP_002479409.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868396|gb|ACL48731.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 280 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 12/134 (8%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +LSA ++S+L LAA S +++P+LD+MQ++P +L + +F GKV Sbjct: 96 VLSATLLSVLVGVPCGILAAMSPVARKIVMPVLDVMQTMPAFVYLIPAIPFFGI---GKV 152 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 IF++ + + F+ + +PRDL E + +F + Q+ + L +P +MP Sbjct: 153 SAVVATVIFSVPPA----IRFTCL-GIQQVPRDLVECTEAFGATRMQRLYKLELPLAMPT 207 Query: 191 ---GLVWNMMMSMS 201 G+ +M+++S Sbjct: 208 IVAGVNQTIMLALS 221 >gi|158520230|ref|YP_001528100.1| binding-protein-dependent transport systems inner membrane component [Desulfococcus oleovorans Hxd3] gi|158509056|gb|ABW66023.1| binding-protein-dependent transport systems inner membrane component [Desulfococcus oleovorans Hxd3] Length = 252 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ S+ I VG +G+R I + P L PA + PL++ + Sbjct: 62 SLGRVLIGFFAGSVAGIVVGTAMGWRRLIDKTLSPIISLFYPIPALGWIPLLMLWIGINE 121 Query: 446 LNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + P + +IF ++ +L+N + G D+ VA + + R ++LP P Sbjct: 122 MLP-----ITLIFICSFFPVLYNTVTGIKQVDADYILVARTLGASEGRILFAVVLPLALP 176 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI--AESTEKGSFPEVVLGVLIM 562 TG G AW I +E+ + TG+GA + AES + V L VL + Sbjct: 177 NIFTGLRLEAGMAWRTVIAAEMVA------IPTGIGALLMRAESLMRIDIIIVCLIVLAV 230 Query: 563 CCFVLALNRFLWHPLYLYG 581 C V N F W L G Sbjct: 231 MCLVFE-NLFAWLERRLTG 248 >gi|157147033|ref|YP_001454352.1| taurine transporter subunit [Citrobacter koseri ATCC BAA-895] gi|157084238|gb|ABV13916.1| hypothetical protein CKO_02810 [Citrobacter koseri ATCC BAA-895] Length = 275 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 19/199 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+++ ++ A II IPVGI +G P I + P +L P + PL+V Sbjct: 83 SLTRILLALLAAVIIGIPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGAGRVQVLWFVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563 +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252 Query: 564 CFVL-----ALNRFL--WH 575 F+L AL R L WH Sbjct: 253 AFILELGLRALQRRLTPWH 271 >gi|313123818|ref|YP_004034077.1| ABC proline/glycine betaine transporter, permease and substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280381|gb|ADQ61100.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 506 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L A S+R G V+ I I+Q+IP L L L P IG A+ A+ + Sbjct: 43 LLAHSKRAGEVVFQIASIIQTIPSLALLGL-------LIPFVGIGT-TPALIALTAYGIM 94 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + Y +L NI +LEE + +F LS W+K L P ++P ++ + +S+ ++ Sbjct: 95 PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPMALPIILSGVSISL----VMII 150 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + + +I G+G+YI + I++ + Sbjct: 151 GTATLAA---MIGAGGLGTYIMIGIQQNN 176 >gi|289522180|ref|ZP_06439034.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504016|gb|EFD25180.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 282 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 15/188 (7%) Query: 51 IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110 I+P+ + L A + +L+A++ISLL L A+ +V+ PILD MQ++ Sbjct: 78 ILPLLIGAFGLWALAMESLAVVLTAVIISLLIGIPMGILMAEINSFAVVIRPILDGMQTM 137 Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170 P +L ++ F GKV A+ A + + L ++P+++EE + Sbjct: 138 PSFVYLIPAMMLF---GLGKV-----PAVLATLIYSLPPVIRLTNMGLRHVPKNIEEAAL 189 Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230 ++ + WQ + +P +MP ++ + + VV + MI G+G + Sbjct: 190 AYGATKWQLLKEVRIPLAMPSILTGVNQTTMMALAMVVVASMIGAR-------GLGQEVL 242 Query: 231 LAIKEQDL 238 L+I D+ Sbjct: 243 LSINRIDI 250 >gi|261340960|ref|ZP_05968818.1| taurine uptake ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288316821|gb|EFC55759.1| taurine uptake ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 275 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R++V ++ A +I +PVGI +G P + + P +L P + PL+V Sbjct: 83 SLARILVALLAAVLIGVPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VALSALAGVKSAQQVRIRAAQSLGASRVQVLLFVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMMQSAGE 235 >gi|209546966|ref|YP_002278884.1| amino acid ABC transporter permease [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538210|gb|ACI58144.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 295 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 15/192 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT + ++S+ L A+S RL V+ PILD+MQ++P +L V M L Sbjct: 102 RTVSMIFVCTILSIAIGIPMGILMARSDRLQRVINPILDVMQTMPSFVYLIPVV---MLL 158 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV G I+AI M + + +D+ E + +F S QK + + +P Sbjct: 159 GIGKVPGLIAVVIYAI-----PPMIRLTDLGIRLVDKDVLEAADAFGTSRSQKLFKVQLP 213 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++P ++ + ++ VV + MI V G+G + AI Q ++ L Sbjct: 214 LALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGL 266 Query: 247 TMLGVIFLYDQL 258 ++G+ ++D++ Sbjct: 267 AIVGIAIIFDRV 278 >gi|300869325|ref|ZP_07113916.1| Binding-protein-dependent transport systems inner membrane component [Oscillatoria sp. PCC 6506] gi|300332702|emb|CBN59114.1| Binding-protein-dependent transport systems inner membrane component [Oscillatoria sp. PCC 6506] Length = 283 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV V AS+ IP+G+ +G P I + ++P L+ PA F PL++ + Sbjct: 91 SLWRVGVGFFFASLFSIPIGVMMGSFPSIRALLEPIFGLMRYMPAPAFIPLLILYLGIGE 150 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + L + +F ++ + + S D E W ++I+P + P Sbjct: 151 -EPKITLIFIGVFFFNSLMVMDTVKFVS---KDLIEATYMLGGNRWETLTHVIVPHVLPG 206 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + + AW IVSE+ + T GLG I+ + E+ +G++++ Sbjct: 207 IIDASRINFAAAWQLVIVSELIA------ATEGLGRRISVAGRFLKTDEIFVGLIVIGVI 260 Query: 566 VLALN 570 L + Sbjct: 261 GLTFD 265 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 21/198 (10%) Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 LF+ + + +L PI +M+ +P F+ ++Y IG E I Sbjct: 104 LFSIPIGVMMGSFPSIRALLEPIFGLMRYMPAPAFIPLLILYLG-------IGEE-PKIT 155 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + ++ + +DL E + + W+ ++ VP +PG++ ++ Sbjct: 156 LIFIGVFFFNSLMVMDTVKFVSKDLIEATYMLGGNRWETLTHVIVPHVLPGIIDASRINF 215 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQ 257 + W V+ SE+I + G+G I++A +K + ++ L ++GVI L Sbjct: 216 AAAWQLVIVSELIAATE------GLGRRISVAGRFLKTDE----IFVGLIVIGVIGLTFD 265 Query: 258 LLFRPMIVWSNKFRLERT 275 LLF+ M+ S K+ ++ Sbjct: 266 LLFQYMLQVSCKWASQKK 283 >gi|293396744|ref|ZP_06641020.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291421008|gb|EFE94261.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 264 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 87/179 (48%), Gaps = 19/179 (10%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI R Sbjct: 101 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG++ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFALGFMWL------TLIVAETISANS 206 Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLERTTGI 278 GIG Y+A+ +E D++ + + +LG + L QLL R + W ++L+ + Sbjct: 207 GIG-YLAMNAREFLQTDIVVVAIVLYAVLGKLADLSAQLLERVWLRWHPAYQLKHGEAL 264 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++G+R + ++LPG P + G A Sbjct: 130 LVALGTLFPIYLNTYHGIKNIDRGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571 G W IV+E S +G+G Y+A + + ++V+ +++ + L Sbjct: 190 GFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDIVVVAIVLYAVLGKLADLSA 242 Query: 572 -------FLWHPLY 578 WHP Y Sbjct: 243 QLLERVWLRWHPAY 256 >gi|283786767|ref|YP_003366632.1| glycine betaine/L-proline ABC transporter permease [Citrobacter rodentium ICC168] gi|282950221|emb|CBG89857.1| glycine betaine/L-proline ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 353 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 170 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 224 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 225 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 277 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 278 VVIASMIAVG-------GLGQMVLRGIGRLDM 302 >gi|301159375|emb|CBW18893.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323131166|gb|ADX18596.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 354 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|300812812|ref|ZP_07093207.1| ABC transporter, substrate-binding protein, QAT family [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496148|gb|EFK31275.1| ABC transporter, substrate-binding protein, QAT family [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 506 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L A S+R G V+ I I+Q+IP L L L P IG A+ A+ + Sbjct: 43 LLAHSKRAGEVVFQITSIIQTIPSLALLGL-------LIPFVGIGT-TPALIALTAYGIM 94 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + Y +L NI +LEE + +F LS W+K L P ++P ++ + +S+ ++ Sbjct: 95 PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPIALPIILSGVSISL----VMII 150 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + + +I G+G+YI + I++ + Sbjct: 151 GTATLAA---MIGAGGLGTYIMIGIQQNN 176 >gi|257870168|ref|ZP_05649821.1| glycine betaine/L-proline ABC transporter [Enterococcus gallinarum EG2] gi|257804332|gb|EEV33154.1| glycine betaine/L-proline ABC transporter [Enterococcus gallinarum EG2] Length = 575 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 26/171 (15%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TL +LS++V S++ L AKS + ++ PILD MQ++P +L V +F Sbjct: 99 TLVLLSSLV-SIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFF---GI 154 Query: 129 GKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + IFA+ T ++ N+ + I R+L E S SF +GWQK L +P Sbjct: 155 GMVPGVFASVIFALPPTVRMTNL------GIRQISRELVEASDSFGGTGWQKLVKLELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + + G+ M+++S M+V+ ++I PG+G + A++ Sbjct: 209 AKSTILAGVNQTTMLALS----------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|261342126|ref|ZP_05969984.1| glycine betaine/L-proline transport system permease protein ProW [Enterobacter cancerogenus ATCC 35316] gi|288315457|gb|EFC54395.1| glycine betaine/L-proline transport system permease protein ProW [Enterobacter cancerogenus ATCC 35316] Length = 356 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|209517263|ref|ZP_03266107.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209502272|gb|EEA02284.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 311 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 11/127 (8%) Query: 66 SRTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF- 123 + TTL ++ +A++ L L A+S R+ MV+ P+LD+MQ+ P +L V+ F Sbjct: 93 AMTTLSLIATAILFCALLGIPIGVLCARSPRVWMVVQPVLDMMQTTPTFVYLVPVVMLFG 152 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG+V A+ T+ + + + + + ++ E ++F WQ W + Sbjct: 153 VGTVPGEV---------AVVTAAMPPLIRFTHLGIKMVETEIVEAGKAFGADKWQLLWEV 203 Query: 184 GVPFSMP 190 +P +MP Sbjct: 204 QLPLAMP 210 >gi|296132982|ref|YP_003640229.1| binding-protein-dependent transport systems inner membrane component [Thermincola sp. JR] gi|296031560|gb|ADG82328.1| binding-protein-dependent transport systems inner membrane component [Thermincola potens JR] Length = 252 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/194 (20%), Positives = 89/194 (45%), Gaps = 16/194 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPG 129 R+L + I+++ L K + + + ++ +QSIP + +L +++F MN Sbjct: 61 RLLISYAIAVVIGVAVGILMGKYKVIDETVGSLIVGLQSIPSVVWLPLALLWFGMN---- 116 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E A IF W M + + ++P + +R+ G + FW++ +P ++ Sbjct: 117 -----EKAIIFITSLGGTWTMIVNTDTGVKSVPPIILRAARTMGAKGTKLFWHVVIPAAV 171 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ M ++ + W ++A E++ G G+G + + D+ I+ M+ + Sbjct: 172 PSIITGMRLAWAFAWRALMAGELLSSGT------GLGQILMMGRNLSDMSQIVAVMIIIG 225 Query: 250 GVIFLYDQLLFRPM 263 + L D L+F+ + Sbjct: 226 MIGCLVDNLMFKKV 239 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 11/184 (5%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + D +V+ + C ++ R+++ IA +I + VGI +G I + L + P+ V Sbjct: 46 FVDNSFVLAITC-SLQRLLISYAIAVVIGVAVGILMGKYKVIDETVGSLIVGLQSIPSVV 104 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + PL + ++ +N + + + GT W ++ N G + P A + G + Sbjct: 105 WLPL---ALLWFGMNEKAIIFITSLGGT-WTMIVNTDTGVKSVPPIILRAARTMGAKGTK 160 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + ++++P P +TG A AW A + E+ S G TGLG + Sbjct: 161 LFWHVVIPAAVPSIITGMRLAWAFAWRALMAGELLSSG------TGLGQILMMGRNLSDM 214 Query: 553 PEVV 556 ++V Sbjct: 215 SQIV 218 >gi|295097267|emb|CBK86357.1| ABC-type proline/glycine betaine transport system, permease component [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 354 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|291616929|ref|YP_003519671.1| SsuD [Pantoea ananatis LMG 20103] gi|291151959|gb|ADD76543.1| SsuD [Pantoea ananatis LMG 20103] Length = 649 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 24/189 (12%) Query: 95 RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ L +++++P L + +++F K+ L +F I+ + Sbjct: 477 RLGERLLDTSLQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LN 528 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y + N+ R L E++RS+ LSGW F + +P ++P ++ + ++ W + Sbjct: 529 TYHGIRNVDRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWL------TL 582 Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267 +V +T+ GIG Y+A+ +E D++ ILYA+L L + LL R + W Sbjct: 583 IVAETISANAGIG-YLAMNAREFLQTDVVMVAIILYALLGKLADVSAL--LLERVWLRWH 639 Query: 268 NKFRLERTT 276 ++ + T Sbjct: 640 PAYQRQEKT 648 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++GW + +ILPG P + G A Sbjct: 516 LVALGTLFPIYLNTYHGIRNVDRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFAL 575 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------- 566 G W IV+E S G+G Y+A + + +VV+ +I+ + Sbjct: 576 GLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTDVVMVAIILYALLGKLADVSA 628 Query: 567 LALNR--FLWHPLY 578 L L R WHP Y Sbjct: 629 LLLERVWLRWHPAY 642 >gi|62181314|ref|YP_217731.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168244607|ref|ZP_02669539.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168822875|ref|ZP_02834875.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194449937|ref|YP_002046773.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197247835|ref|YP_002147710.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204929493|ref|ZP_03220567.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|224584594|ref|YP_002638392.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238909581|ref|ZP_04653418.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|62128947|gb|AAX66650.1| ABC superfamily (membrane), glycine/betaine/proline transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194408241|gb|ACF68460.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197211538|gb|ACH48935.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204321212|gb|EDZ06412.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205336554|gb|EDZ23318.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340771|gb|EDZ27535.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224469121|gb|ACN46951.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320087216|emb|CBY96982.1| Glycine betaine/L-proline transport system permease protein proW [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322614366|gb|EFY11297.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621569|gb|EFY18422.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624430|gb|EFY21263.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626628|gb|EFY23433.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633512|gb|EFY30254.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638445|gb|EFY35143.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639748|gb|EFY36432.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643794|gb|EFY40344.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649480|gb|EFY45914.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655930|gb|EFY52230.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661325|gb|EFY57550.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662523|gb|EFY58731.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666897|gb|EFY63072.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671267|gb|EFY67390.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677726|gb|EFY73789.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681447|gb|EFY77477.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683846|gb|EFY79856.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715800|gb|EFZ07371.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323193765|gb|EFZ78968.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197447|gb|EFZ82584.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203262|gb|EFZ88291.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205208|gb|EFZ90183.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212779|gb|EFZ97590.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218079|gb|EGA02791.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221658|gb|EGA06071.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225126|gb|EGA09377.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230842|gb|EGA14960.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234807|gb|EGA18893.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238846|gb|EGA22896.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241546|gb|EGA25577.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248307|gb|EGA32243.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252927|gb|EGA36761.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256951|gb|EGA40660.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260574|gb|EGA44185.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264368|gb|EGA47874.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269502|gb|EGA52955.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 354 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|119386564|ref|YP_917619.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119377159|gb|ABL71923.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] Length = 293 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 27/178 (15%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R ++ + + L V L A+S R+ ++ PILD+MQ++P +L V+ Sbjct: 97 EDTMRTIAMVAVCTLIAVVLGIPVGILMAQSNRMNAMVTPILDMMQTMPSFVYLIPVVMI 156 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F GKV G I+AI V +T + + D+ E + +F S WQK Sbjct: 157 F---GLGKVPGLIAVVIYAI--PPVIRLT---NLGIRQVAPDVLEAAEAFGSSSWQKLRD 208 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P ++P G+ +MMS++ M+VV ++I + G+G + AI +Q Sbjct: 209 VQLPLALPTIMAGINQTIMMSLA----------MVVVA-SMIGVRGLGQPVLQAINQQ 255 >gi|282897425|ref|ZP_06305427.1| Integral membrane components of other binding- protein-dependent transport system [Raphidiopsis brookii D9] gi|281198077|gb|EFA72971.1| Integral membrane components of other binding- protein-dependent transport system [Raphidiopsis brookii D9] Length = 263 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 18/181 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++A++I IP+G+ +G P + + +P + PA F PL+ + Y+ Sbjct: 73 SLLRVLGGFLLAAVISIPLGVLMGSFPVVRALFEPAISIFRYMPAPAFIPLL---ILYFG 129 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L + LL+ GT + FN + A +E+ + + G + IIL I P+ Sbjct: 130 LGETPKI-LLIFIGT---VFFNTLMIMDAVKFVSRELIETSYTLGGK-NHQIILQVILPF 184 Query: 506 YVTGAITAC----GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 V I AC +WN IV+E+ + T GLG I+ + E+ G+++ Sbjct: 185 IVPNIIDACRVNMAASWNLVIVAELVA------ATEGLGRRISVAQRFLKTDEIFAGLIV 238 Query: 562 M 562 + Sbjct: 239 I 239 >gi|237730337|ref|ZP_04560818.1| taurine transporter subunit [Citrobacter sp. 30_2] gi|226905876|gb|EEH91794.1| taurine transporter subunit [Citrobacter sp. 30_2] Length = 276 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 19/199 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A ++ +PVGI +G P + + P +L P + PL+V Sbjct: 84 SLTRIVIALLAAVLLGVPVGIAMGLSPTMRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 143 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 144 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRVRAAQSLGASRAQVLWFVILPGALPE 199 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563 +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 200 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 253 Query: 564 CFVL-----ALNRFL--WH 575 F+L AL R L WH Sbjct: 254 AFILELGLRALQRRLTPWH 272 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 31/151 (20%), Positives = 72/151 (47%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R++ A++ ++L S + +L PI+++ + +P L +L V++ Sbjct: 79 QHLAASLTRIVIALLAAVLLGVPVGIAMGLSPTMRGILDPIIELYRPVPPLAYLPLMVIW 138 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + + + ++S S Q W+ Sbjct: 139 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRVRAAQSLGASRAQVLWF 190 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 191 VILPGALPEILTGLRIGLGVGWSTLVAAELI 221 >gi|218693829|ref|YP_002401496.1| taurine transporter subunit [Escherichia coli 55989] gi|218350561|emb|CAU96249.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] Length = 275 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|209885998|ref|YP_002289855.1| binding-protein-dependent transport systems inner membrane component [Oligotropha carboxidovorans OM5] gi|209874194|gb|ACI93990.1| binding-protein-dependent transport systems inner membrane component [Oligotropha carboxidovorans OM5] Length = 283 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 11/200 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+V + A +I +P+G+ +G ++ P Q L + P+ V Sbjct: 92 VSLRRVLVGLGFALLIGVPLGLAVGSYARLNIATSPAFQFLRMISPLSWMPIAVMVFGVG 151 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP + ++ F W IL N G + +A S T W ++ILPG+ Sbjct: 152 D-NP---IYFMLAFAAVWPILLNTAEGVRRLQPSWLSLADSLAATRWETLWHVILPGVLG 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + +TG A G W + E+ + GLG +I ++ ++ ++ E++ VL++ Sbjct: 208 HVLTGLRLAIGIVWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMATVLMIGI 261 Query: 565 FVLALNRFLWHPLYLYGTRC 584 L+ LY TR Sbjct: 262 LGFMLDAGA-RALYQAATRS 280 >gi|56414768|ref|YP_151843.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363696|ref|YP_002143333.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129025|gb|AAV78531.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095173|emb|CAR60723.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|261868165|ref|YP_003256087.1| glycine betaine [Aggregatibacter actinomycetemcomitans D11S-1] gi|293391893|ref|ZP_06636227.1| glycine betaine [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413497|gb|ACX82868.1| glycine betaine [Aggregatibacter actinomycetemcomitans D11S-1] gi|290952427|gb|EFE02546.1| glycine betaine [Aggregatibacter actinomycetemcomitans D7S-1] Length = 503 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LSA++I+++ A L ++ R + +++ +++Q+IP L L + + P +I Sbjct: 24 LSALLIAVVIAVPIAVLLSRKRHMAEIVLQFTNVLQTIPSLALLGLLIPFVGIGSPPVLI 83 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 L A+ IF + Y L I + +++ +F LS WQ W + +P ++P + Sbjct: 84 ALTLYALLPIFQ--------NTYLGLSQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAM 135 Query: 193 V 193 + Sbjct: 136 M 136 >gi|333010800|gb|EGK30226.1| taurine transport system permease protein tauC [Shigella flexneri K-272] gi|333021298|gb|EGK40551.1| taurine transport system permease protein tauC [Shigella flexneri K-227] Length = 205 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 19 SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGE 78 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 79 TS-KILLIYLAIFAP---VAMSPLAGVKSAQQVRIRAAQSLGASRAKVLWFVILPGALPE 134 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 135 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 171 >gi|327393668|dbj|BAK11090.1| nitrate transport permease protein NrtB [Pantoea ananatis AJ13355] Length = 312 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 158 PIIALLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMIINTAEGVQRI 209 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 210 PQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 264 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP G +G ++ P LL + P + + + Sbjct: 124 SLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWLP--IGLLLFQR 181 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ W R I+ P + P Sbjct: 182 AEPAS--SWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTIMRRILFPAVLPA 239 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 240 VLTGVRLSIGIAWLVIVAAEMLTGG 264 >gi|325686152|gb|EGD28203.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 506 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L A S+R G V+ I I+Q+IP L L L P IG A+ A+ + Sbjct: 43 LLAHSKRAGEVVFQITSIIQTIPSLALLGL-------LIPFVGIGT-TPALIALTAYGIM 94 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + Y +L NI +LEE + +F LS W+K L P ++P ++ + +S+ ++ Sbjct: 95 PIYQNTYSALRNIDPNLEEAADAFGLSRWKKLSRLEFPIALPIILSGVSISL----VMII 150 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + + +I G+G+YI + I++ + Sbjct: 151 GTATLAA---MIGAGGLGTYIIIGIQQNN 176 >gi|92112317|ref|YP_572245.1| binding-protein-dependent transport systems inner membrane component [Chromohalobacter salexigens DSM 3043] gi|91795407|gb|ABE57546.1| binding-protein-dependent transport systems inner membrane component [Chromohalobacter salexigens DSM 3043] Length = 253 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 22/160 (13%) Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 +++ IP L ++ F +++F E AA F I W F+ Y ++ I Sbjct: 102 LLRPIPPLAWIPFAIIWFGV--------TETAAAFIISIGVFWINYFTSYSAVRAIDDGY 153 Query: 166 EEVSRSFRLSGW-QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 EV+R+F G+ + + +P + PG++ + + GW VVA+E+ + PG Sbjct: 154 YEVARAFGQGGFGARLAKISLPAAAPGILGGLRAGLGQGWMTVVAAELFGI-------PG 206 Query: 225 IGSYIALAIKEQDLLA---ILYAMLTMLGVIFLYDQLLFR 261 IG + ++ LLA ++ MLT+ + L+D L R Sbjct: 207 IGQRM---MEASGLLATDVVVVYMLTIAALYALFDFLFMR 243 >gi|219669918|ref|YP_002460353.1| binding-protein-dependent transporters inner membrane component [Desulfitobacterium hafniense DCB-2] gi|219540178|gb|ACL21917.1| binding-protein-dependent transport systems inner membrane component [Desulfitobacterium hafniense DCB-2] Length = 255 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 22/249 (8%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--SRTTLRMLSAMV 77 + LL+F++VI + +L VP + I + S YA T R+L+ + Sbjct: 13 YKLLSFLMVISLWKVLTLHFSPLIVPTMGSVLAEIYRILTSPDLYAMIPLTAGRLLAGLS 72 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 + + V L ++ VL P++ IMQ++P + ++ +V+F + GK Sbjct: 73 LGVSLGLVLGILMGNFSQVKGVLSPLVGIMQTVPPVSWVVLALVWFG--FNGK------P 124 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 A+F + S + +T ++ I ++L E++ +R S ++ ++ +P +P Sbjct: 125 AVFIVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQ 184 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLA--ILYAMLTMLGVI 252 +++ GW V +E++ D GIG I L ++ + ++A IL +L L Sbjct: 185 IALGSGWKIAVMAEVLTTSD------GIGGMIKLGRLNVEPESIIAWSILVVLLFYLS-D 237 Query: 253 FLYDQLLFR 261 FL + LFR Sbjct: 238 FLIGKFLFR 246 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++I T I NV AG + E+AS + + + R++ILP I PY+ + A Sbjct: 128 IVILSTLPVITINVCAGFRRIDKNLLEMASLYRFSKVKRLRHVILPSILPYFKSAFQIAL 187 Query: 515 GGAWNASIVSEV 526 G W ++++EV Sbjct: 188 GSGWKIAVMAEV 199 >gi|227508241|ref|ZP_03938290.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192470|gb|EEI72537.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 340 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 11/189 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 II ++I + +G+++G + PF +++ PA + PL + ++ Sbjct: 157 IIGTLIGVVLGLFMGRYRQFNYWSFPFLKVIGIIPAAAWMPLTMVIFPTSYMAE----IF 212 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ F + + F I G + D+ E A + + ++ R +++PG P G TA Sbjct: 213 LIAFAVWFPVAFMTIGGVQSISTDYFESAKTLGFSEFQILRKVVIPGALPNIFIGIFTAM 272 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574 G ++ ++SE+ GLG YI + G++ +V ++IM + FL Sbjct: 273 GLSFTMLVISEMIG------AKVGLGWYINWAKGVGNYTQVYAAIVIMAVLFSVIFSFL- 325 Query: 575 HPLYLYGTR 583 + L Y R Sbjct: 326 NKLQEYALR 334 >gi|16761591|ref|NP_457208.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143071|ref|NP_806413.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|168233771|ref|ZP_02658829.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238725|ref|ZP_02663783.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194444232|ref|YP_002042055.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194472631|ref|ZP_03078615.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194733925|ref|YP_002115766.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|213163680|ref|ZP_03349390.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424577|ref|ZP_03357366.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581947|ref|ZP_03363773.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213618844|ref|ZP_03372670.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650061|ref|ZP_03380114.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213859649|ref|ZP_03385353.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824479|ref|ZP_06544055.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25306099|pir||AB0842 glycine betaine/L-proline transport system permease protein P STY2936 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503892|emb|CAD05921.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Typhi] gi|29138704|gb|AAO70273.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194402895|gb|ACF63117.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194458995|gb|EDX47834.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709427|gb|ACF88648.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288523|gb|EDY27900.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205332211|gb|EDZ18975.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|16766121|ref|NP_461736.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992531|ref|ZP_02573629.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168262082|ref|ZP_02684055.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464070|ref|ZP_02697987.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197264631|ref|ZP_03164705.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245962|ref|YP_002216786.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386810|ref|ZP_03213422.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205353760|ref|YP_002227561.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858079|ref|YP_002244730.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|20141693|sp|P17327|PROW_SALTY RecName: Full=Glycine betaine/L-proline transport system permease protein proW gi|16421359|gb|AAL21695.1| glycine/betaine/proline transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|195633315|gb|EDX51729.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197242886|gb|EDY25506.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940478|gb|ACH77811.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603908|gb|EDZ02453.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205273541|emb|CAR38527.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205329315|gb|EDZ16079.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205349121|gb|EDZ35752.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709882|emb|CAR34235.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261247951|emb|CBG25784.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994926|gb|ACY89811.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312913833|dbj|BAJ37807.1| glycine betaine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223607|gb|EFX48672.1| L-proline glycine betaine ABC transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|326624544|gb|EGE30889.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628868|gb|EGE35211.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989687|gb|AEF08670.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|312879364|ref|ZP_07739164.1| binding-protein-dependent transport systems inner membrane component [Aminomonas paucivorans DSM 12260] gi|310782655|gb|EFQ23053.1| binding-protein-dependent transport systems inner membrane component [Aminomonas paucivorans DSM 12260] Length = 274 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 12/183 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+ ++S++ +P+G+ +G RP + P + L P PL+ + ++ + Sbjct: 79 RIAAGFGLSSLVALPLGVLLGLRPRLGRLAYPTLEFLRHVPPLAVLPLL---ILWFGIGE 135 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++++++ T + + N + G EV + ++ R I+LP P +T Sbjct: 136 GSKMAVILL-ATFFPVFLNTLEGVRRCDPGLLEVGRTLGLSEGEGVRRIVLPAALPSILT 194 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVL 567 G G +W + I +E+ + +GLG Y+ E S P+V++ GVL++ Sbjct: 195 GLRLGLGYSWRSLIGAELIA------AASGLG-YLIHDAEALSRPDVIVAGVLVLGVIGA 247 Query: 568 ALN 570 A + Sbjct: 248 ATD 250 >gi|157148217|ref|YP_001455536.1| glycine betaine transporter membrane protein [Citrobacter koseri ATCC BAA-895] gi|157085422|gb|ABV15100.1| hypothetical protein CKO_04028 [Citrobacter koseri ATCC BAA-895] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|326692454|ref|ZP_08229459.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc argentinum KCTC 3773] Length = 568 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A VISL+ L AKS + ++ PILD MQ++P +L V +F + + PG Sbjct: 102 ASVISLVIGIPLGILTAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 +FA + M + +P L E + SF + WQK L +P + + Sbjct: 158 -----VFASIIFALPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNTIL 212 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G +M+++S +VV ++I PG+G + A++ D+ Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQHADI 250 >gi|283835587|ref|ZP_06355328.1| glycine betaine/L-proline transport system permease protein ProW [Citrobacter youngae ATCC 29220] gi|291068798|gb|EFE06907.1| glycine betaine/L-proline transport system permease protein ProW [Citrobacter youngae ATCC 29220] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|209552027|ref|YP_002283943.1| binding-protein-dependent transporters inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539620|gb|ACI59551.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 660 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 99/494 (20%), Positives = 195/494 (39%), Gaps = 72/494 (14%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +++IMQ++PI +L T++ F P AA+FA + M + +L ++P Sbjct: 191 VMNIMQTVPIFSYLLPTLLLF-GYGPS-------AALFATVVYALPPMVHATVLALRSVP 242 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + E++R S Q W + +P +MP GL +MM+++ V+ + MI G Sbjct: 243 SETLELARMTGCSRTQTLWKVELPVAMPQLAIGLNQVVMMTLN----MVIIASMIGAG-- 296 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278 G+G + A++ D A A + ++ + + D+L + ++TG Sbjct: 297 -----GLGYDVLRALRRLDFGAGFEAGMGIVALAVVLDRL--------TQAAARNQSTGR 343 Query: 279 Y----PADS-WVLYLFRKTNFLRFI--GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331 + P DS L L + F ++W P + G + F + F Sbjct: 344 HRLWRPRDSILALSLLVVPTVVSFAVPALAAW----PTGWTLTTAPFWNGAVSF-INQTF 398 Query: 332 LQLCSNQRVSYMLDIF-----------WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 R + +L + W VV +A+ A+ G +L+++ Sbjct: 399 YGPLEAMRTAMLLGVMNPFRDLLQSAPWSVVVLLLAM-TAYALGGLRTTAVVMLLILFIV 457 Query: 381 WLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 G +++ V+ + IA I +P+GIW+ P + +Q L P V+ Sbjct: 458 VTGYWEAAMASVYLTVLSVAIALAIGLPLGIWVAGHPRLHGPVQLALDTLQTLPTLVYL- 516 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 + V + L + + + + +AG + P++ E T W+ +R Sbjct: 517 --LPAVMLFRNGDFSALIAIASYAIAPAVRYG-MAGMAHVPHERIEAGLMSGCTPWQTFR 573 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG-SFPE 554 +I LP P + G A + +++ + T LG + + +G + P Sbjct: 574 FISLPSALPTLILGVNQTVMMALSMLVIAALVG-------TRELGQEVYTALARGQTGPG 626 Query: 555 VVLGVLIMCCFVLA 568 ++ G+ + C ++A Sbjct: 627 IIAGLCVACIALIA 640 >gi|161615705|ref|YP_001589670.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365069|gb|ABX68837.1| hypothetical protein SPAB_03490 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|237729637|ref|ZP_04560118.1| glycine betaine transporter membrane protein [Citrobacter sp. 30_2] gi|226908243|gb|EEH94161.1| glycine betaine transporter membrane protein [Citrobacter sp. 30_2] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|225869714|ref|YP_002745661.1| glycine-betaine binding permease protein [Streptococcus equi subsp. equi 4047] gi|225699118|emb|CAW92301.1| putative glycine-betaine binding permease protein [Streptococcus equi subsp. equi 4047] Length = 576 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK++ + V+ P+LD+MQ++P +L V +F G V Sbjct: 102 LVASLISVLLGIPLGIWMAKNKIVHQVINPMLDLMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA+ T + N+ +L +IP +L E S +F + QK + +P + Sbjct: 159 GVFASVIFALPPTVRFTNL------ALRHIPTELVEASDAFGSTPKQKLLKVELPLAKHT 212 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 213 MMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|167552691|ref|ZP_02346443.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322669|gb|EDZ10508.1| glycine betaine/L-proline transport system permease protein ProW [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|161502140|ref|YP_001569252.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863487|gb|ABX20110.1| hypothetical protein SARI_00163 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 354 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|255349261|ref|ZP_05381268.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis 70] gi|255503797|ref|ZP_05382187.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis 70s] gi|255507479|ref|ZP_05383118.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis D(s)2923] gi|289525901|emb|CBJ15383.1| ABC transporter permease [Chlamydia trachomatis Sweden2] gi|296435488|gb|ADH17666.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis E/150] gi|296439205|gb|ADH21358.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis E/11023] Length = 589 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + +++Q + N P +L E ++ + WQK + L +P +P + + ++MS F +A Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267 E + G+G I + + D+ L + LTML + Y LL + Sbjct: 190 GEWVATQS------GLGILIVESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243 Query: 268 NKFRLERTTGIYPADSWVLYL 288 FR+E+T+ WV L Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262 >gi|281178065|dbj|BAI54395.1| sulfonate ABC transporter permease component [Escherichia coli SE15] Length = 264 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 +L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 ELVEMARSYGLSGMPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|22537935|ref|NP_688786.1| amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|76798898|ref|ZP_00781104.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|22534834|gb|AAN00659.1|AE014273_6 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76585744|gb|EAO62296.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] Length = 575 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS++ AKS ++ V+ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISIIIGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + +FA+ T + N+ ++ IP +L E S SF + QK + + +P + Sbjct: 158 PGVFASVVFALPPTVRFTNL------AIREIPLELIEASDSFGSTVKQKLFKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|217324236|ref|ZP_03440320.1| taurine transport system permease protein TauC [Escherichia coli O157:H7 str. TW14588] gi|217320457|gb|EEC28881.1| taurine transport system permease protein TauC [Escherichia coli O157:H7 str. TW14588] Length = 224 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 30 AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 89 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 90 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 145 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 146 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 184 >gi|147676909|ref|YP_001211124.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Pelotomaculum thermopropionicum SI] gi|146273006|dbj|BAF58755.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Pelotomaculum thermopropionicum SI] Length = 217 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 18/145 (12%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT+ RV+ + A +I +P+G +G+ + + + P + P + PL + Sbjct: 84 ITLKRVLTGFLYALMIGVPLGFLMGYSKAVMNILDPLIDSVRQVPIMAWVPLTI------ 137 Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 +W L L+ F + ++ N IAG P D+ A S W + + Sbjct: 138 -----VWFGLGDGPTVFLIAFAGVFPVILNTIAGVQNIPKDYYNAARSMGAGPWSIFVNV 192 Query: 498 ILPGIFPYYVTGAITACGGAWNASI 522 I+PG P +TG A G W + I Sbjct: 193 IVPGSLPDILTGGRIAVGLGWMSVI 217 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 8/141 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L+ + +L+ L S+ + +L P++D ++ +PI+ ++ T+V+F L Sbjct: 85 TLKRVLTGFLYALMIGVPLGFLMGYSKAVMNILDPLIDSVRQVPIMAWVPLTIVWF-GLG 143 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +F I + V+ + + + NIP+D +RS W F + VP Sbjct: 144 DGP-------TVFLIAFAGVFPVILNTIAGVQNIPKDYYNAARSMGAGPWSIFVNVIVPG 196 Query: 188 SMPGLVWNMMMSMSGGWFFVV 208 S+P ++ +++ GW V+ Sbjct: 197 SLPDILTGGRIAVGLGWMSVI 217 >gi|84685623|ref|ZP_01013520.1| ABC transporter, permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84666289|gb|EAQ12762.1| ABC transporter, permease protein [Rhodobacterales bacterium HTCC2654] Length = 269 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 10/178 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ + V + +A +I + G++IG + P L + P P+V+ + Sbjct: 71 VSLSNMAVGLALAILIGVGTGLYIGDHAKVRQAAMPMLNFLRSVPPAAIVPIVIIALG-I 129 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P ++ ++ F W IL N I G P + + A +F I +R ++L P Sbjct: 130 GAAPKIF---IIAFTCLWPILLNTIDGVRGMPEELSDTARAFRIPRGLTYRRVLLMASLP 186 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + G A A ++SE + GLG YI E+ ++ + E G +++ Sbjct: 187 QIMAGIRVAIAVALVLMVISEFFG------ASAGLGFYINENKQRFAMVETWAGTILI 238 >gi|24111695|ref|NP_706205.1| taurine transporter subunit [Shigella flexneri 2a str. 301] gi|30061820|ref|NP_835991.1| taurine transporter subunit [Shigella flexneri 2a str. 2457T] gi|110804390|ref|YP_687910.1| taurine transporter subunit [Shigella flexneri 5 str. 8401] gi|157157564|ref|YP_001461542.1| taurine transporter subunit [Escherichia coli E24377A] gi|191166752|ref|ZP_03028579.1| taurine uptake ABC transporter, permease protein [Escherichia coli B7A] gi|193065230|ref|ZP_03046303.1| taurine uptake ABC transporter, permease protein [Escherichia coli E22] gi|193068646|ref|ZP_03049607.1| taurine uptake ABC transporter, permease protein [Escherichia coli E110019] gi|209917580|ref|YP_002291664.1| taurine transporter subunit [Escherichia coli SE11] gi|218552930|ref|YP_002385843.1| taurine transporter subunit [Escherichia coli IAI1] gi|256020340|ref|ZP_05434205.1| taurine transporter subunit [Shigella sp. D9] gi|260842571|ref|YP_003220349.1| taurine transporter subunit TauC [Escherichia coli O103:H2 str. 12009] gi|260853593|ref|YP_003227484.1| taurine transporter subunit TauC [Escherichia coli O26:H11 str. 11368] gi|300818312|ref|ZP_07098523.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300820398|ref|ZP_07100550.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|307312253|ref|ZP_07591889.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|309794911|ref|ZP_07689332.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|312970457|ref|ZP_07784638.1| taurine transport system permease protein tauC [Escherichia coli 1827-70] gi|331666715|ref|ZP_08367589.1| taurine transport system permease protein TauC [Escherichia coli TA271] gi|331676031|ref|ZP_08376743.1| taurine transport system permease protein TauC [Escherichia coli H591] gi|332281511|ref|ZP_08393924.1| taurine uptake ABC transporter [Shigella sp. D9] gi|24050472|gb|AAN41912.1| taurine transport system permease protein [Shigella flexneri 2a str. 301] gi|30040062|gb|AAP15796.1| taurine transport system permease protein [Shigella flexneri 2a str. 2457T] gi|110613938|gb|ABF02605.1| taurine transport system permease protein [Shigella flexneri 5 str. 8401] gi|157079594|gb|ABV19302.1| taurine uptake ABC transporter, permease protein [Escherichia coli E24377A] gi|190903263|gb|EDV62985.1| taurine uptake ABC transporter, permease protein [Escherichia coli B7A] gi|192927204|gb|EDV81825.1| taurine uptake ABC transporter, permease protein [Escherichia coli E22] gi|192958009|gb|EDV88451.1| taurine uptake ABC transporter, permease protein [Escherichia coli E110019] gi|209910839|dbj|BAG75913.1| taurine ABC transporter permease component [Escherichia coli SE11] gi|218359698|emb|CAQ97239.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|257752242|dbj|BAI23744.1| taurine transporter subunit TauC [Escherichia coli O26:H11 str. 11368] gi|257757718|dbj|BAI29215.1| taurine transporter subunit TauC [Escherichia coli O103:H2 str. 12009] gi|281599613|gb|ADA72597.1| Taurine transport system permease protein [Shigella flexneri 2002017] gi|300527183|gb|EFK48252.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300529203|gb|EFK50265.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|306907755|gb|EFN38257.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|308121564|gb|EFO58826.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|310337106|gb|EFQ02244.1| taurine transport system permease protein tauC [Escherichia coli 1827-70] gi|313646668|gb|EFS11127.1| taurine transport system permease protein tauC [Shigella flexneri 2a str. 2457T] gi|315059650|gb|ADT73977.1| taurine transporter subunit [Escherichia coli W] gi|323152103|gb|EFZ38397.1| taurine transport system permease protein tauC [Escherichia coli EPECa14] gi|323171143|gb|EFZ56792.1| taurine transport system permease protein tauC [Escherichia coli LT-68] gi|323184807|gb|EFZ70178.1| taurine transport system permease protein tauC [Escherichia coli 1357] gi|323379786|gb|ADX52054.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli KO11] gi|324016636|gb|EGB85855.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324116853|gb|EGC10766.1| inner membrane transport system [Escherichia coli E1167] gi|331065939|gb|EGI37823.1| taurine transport system permease protein TauC [Escherichia coli TA271] gi|331076089|gb|EGI47371.1| taurine transport system permease protein TauC [Escherichia coli H591] gi|332103863|gb|EGJ07209.1| taurine uptake ABC transporter [Shigella sp. D9] gi|332761613|gb|EGJ91893.1| taurine transport system permease protein tauC [Shigella flexneri 4343-70] gi|332764415|gb|EGJ94648.1| taurine transport system permease protein tauC [Shigella flexneri K-671] gi|333008725|gb|EGK28189.1| taurine transport system permease protein tauC [Shigella flexneri K-218] gi|333022109|gb|EGK41352.1| taurine transport system permease protein tauC [Shigella flexneri K-304] Length = 275 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|75674870|ref|YP_317291.1| binding-protein dependent transport system inner membrane protein [Nitrobacter winogradskyi Nb-255] gi|74419740|gb|ABA03939.1| Binding-protein-dependent transport systems inner membrane component [Nitrobacter winogradskyi Nb-255] Length = 275 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 17/197 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + +AS + I +G+ +G + I P+ +++ PA + PL + Sbjct: 83 SLRRIAIAYALASALGIGLGLAVGRSRLARAVILPYVEIIRPIPAVAWIPLAIL------ 136 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P S++ I G + IL N I G P A S + +++++LP Sbjct: 137 MWPTEESSIIYITALGAMFPILLNTIHGVEQTPEILVRAAQSLGASRLAIFQHVVLPSAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ VTG G +W + + E+ S + G+G + + +PE+V+G++++ Sbjct: 197 PHIVTGLAIGMGVSWFSLLAGEIISGQY------GIGYFTWNAYSLILYPEIVVGMIVIG 250 Query: 564 CFVLALN---RFLWHPL 577 A R L PL Sbjct: 251 LLGTASTHAVRLLTRPL 267 >gi|157159883|ref|YP_001457201.1| taurine transporter subunit [Escherichia coli HS] gi|157065563|gb|ABV04818.1| taurine uptake ABC transporter, permease protein [Escherichia coli HS] Length = 275 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|227112289|ref|ZP_03825945.1| nitrate transporter permease component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 305 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 144 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 195 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V+R +LS + + +P +P ++ + +S+ W +VA+EM+ Sbjct: 196 EGVRRIPQDYLNVARVLKLSEFTIMRKILLPAVLPNMLTGVRLSIGVAWLVIVAAEMLTG 255 Query: 216 G 216 G Sbjct: 256 G 256 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ IP G IG +++ + P LL + P + Sbjct: 111 WNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 168 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + P S + + W ++ N G P D+ VA ++ + R I+LP Sbjct: 169 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMRKILLP 226 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530 + P +TG + G AW + +E+ + G Sbjct: 227 AVLPNMLTGVRLSIGVAWLVIVAAEMLTGG 256 >gi|150395875|ref|YP_001326342.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150027390|gb|ABR59507.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 295 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 25/187 (13%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 V+S+ + ++S R V+ P+LD+MQ++P +L V M L GKV G Sbjct: 112 VLSIAVGIPMGIIMSRSDRFQNVVNPVLDVMQTMPSFVYLIPVV---MLLGIGKVPGLIA 168 Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191 I+AI ++ N+ + + +D+ E + +F S WQK + +P ++P G Sbjct: 169 VVIYAIPPMIRLTNLGIRL------VDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAG 222 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + +MM+++ M+V+ ++I + G+G + AI Q ++ L ++G+ Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGI 271 Query: 252 IFLYDQL 258 ++D++ Sbjct: 272 AIIFDRV 278 >gi|194432572|ref|ZP_03064858.1| taurine uptake ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194419133|gb|EDX35216.1| taurine uptake ABC transporter, permease protein [Shigella dysenteriae 1012] gi|332085640|gb|EGI90804.1| taurine transport system permease protein tauC [Shigella dysenteriae 155-74] Length = 275 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|15599131|ref|NP_252625.1| permease of ABC taurine transporter [Pseudomonas aeruginosa PAO1] gi|107103453|ref|ZP_01367371.1| hypothetical protein PaerPA_01004523 [Pseudomonas aeruginosa PACS2] gi|116051976|ref|YP_789181.1| taurine ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218889782|ref|YP_002438646.1| putative permease of ABC taurine transporter [Pseudomonas aeruginosa LESB58] gi|254236829|ref|ZP_04930152.1| hypothetical protein PACG_02849 [Pseudomonas aeruginosa C3719] gi|254242624|ref|ZP_04935946.1| hypothetical protein PA2G_03383 [Pseudomonas aeruginosa 2192] gi|9950122|gb|AAG07323.1|AE004811_6 probable permease of ABC taurine transporter [Pseudomonas aeruginosa PAO1] gi|115587197|gb|ABJ13212.1| probable permease of ABC taurine transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126168760|gb|EAZ54271.1| hypothetical protein PACG_02849 [Pseudomonas aeruginosa C3719] gi|126196002|gb|EAZ60065.1| hypothetical protein PA2G_03383 [Pseudomonas aeruginosa 2192] gi|218770005|emb|CAW25767.1| probable permease of ABC taurine transporter [Pseudomonas aeruginosa LESB58] Length = 272 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + A + IP+G+ +G P + + P + P + PL+V Sbjct: 84 SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 143 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L +F +L AG + + W+ RY+ILP P Sbjct: 144 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 199 Query: 506 YVTGAITACGGAWNASIVSEV 526 +TG A G W+ + +E+ Sbjct: 200 VLTGLRIALGVGWSTLVAAEL 220 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 76 SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 135 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++F IG EL+ + I+ + + + + + R + R S WQ Sbjct: 136 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 187 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y+ +P ++P ++ + +++ GW +VA+E+I Sbjct: 188 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 221 >gi|332800284|ref|YP_004461783.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp. Re1] gi|332698019|gb|AEE92476.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter sp. Re1] Length = 282 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 29/173 (16%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+++++ +L A + + ++L PILD MQ++P +L +++F Sbjct: 101 LTSVILCILIGVPLGIYTAYNSKAEIILNPILDGMQTMPSFVYLIPAMIFF--------- 151 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 L + A+F + +++ + + + N+P ++ E + SF S WQ + +P +M Sbjct: 152 --GLGTVPAVFATIIYSTPPCIRLTSLAIKNVPEEMREAAYSFGSSRWQTLIKVELPQAM 209 Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 P G+ MM+MS +VV ++I G+G + +AI D+ Sbjct: 210 PTIMAGINQTTMMAMS-----------MVVISSMIGAKGLGENVLIAINRSDI 251 >gi|307131481|ref|YP_003883497.1| alkanesulfonates transport system permease [Dickeya dadantii 3937] gi|306529010|gb|ADM98940.1| Alkanesulfonates transport system permease protein [Dickeya dadantii 3937] Length = 263 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 21/194 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ S +T R L+ I + SR +L + +++++P L + +++ Sbjct: 60 QHLSISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F ++ + Y + NI L E+SRS+ LSG++ F Sbjct: 120 FGIEESAKIFLVALGTLFPVY--------LNTYHGIRNIDSGLLEMSRSYGLSGFRLFRE 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + S+ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VLLPGALPSIMVGVRFSLGLMWL------TLIVAETISASSGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTMLG 250 ILYA+L L Sbjct: 225 VVAIILYALLGKLA 238 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/210 (22%), Positives = 84/210 (40%), Gaps = 35/210 (16%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R + I + + +G G + Q+L P PLV+ Sbjct: 63 SISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVI----- 117 Query: 444 YHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 LW + L+ GT + + N G + E++ S+ ++G+R +R Sbjct: 118 ------LWFGIEESAKIFLVALGTLFPVYLNTYHGIRNIDSGLLEMSRSYGLSGFRLFRE 171 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LPG P + G + G W IV+E S ++G+G Y+A + + +VV Sbjct: 172 VLLPGALPSIMVGVRFSLGLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVV 224 Query: 557 LGVLIMCCFV--------LALNR--FLWHP 576 + +I+ + L L R WHP Sbjct: 225 VVAIILYALLGKLADVIALTLERIWLRWHP 254 >gi|313200731|ref|YP_004039389.1| binding-protein-dependent transport systems inner membrane component [Methylovorus sp. MP688] gi|312440047|gb|ADQ84153.1| binding-protein-dependent transport systems inner membrane component [Methylovorus sp. MP688] Length = 320 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S++ +P+GI G +S +PF + PA F L V+ + Y P + + + Sbjct: 135 VISSLVGVPLGILAGTYSAVSRLFEPFIEFFRYLPAPAFGALAVAVLGIYD-GPKIAIIV 193 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + F Q I+ N E A + + W+ R++++PG+ P Sbjct: 194 IGTFFQQVLIISNT---TRKLDYSLLEAAMTLGTSRWKLLRHVVIPGVLPELYRDQRILL 250 Query: 515 GGAWNASIVSEV 526 G AW IV+E+ Sbjct: 251 GWAWTYLIVAEL 262 >gi|296104355|ref|YP_003614501.1| glycine betaine/proline transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058814|gb|ADF63552.1| glycine betaine/proline transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 354 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|218511038|ref|ZP_03508916.1| binding-protein dependent transport system inner membrane protein [Rhizobium etli Brasil 5] Length = 264 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 19/234 (8%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 Q P D+ L L + S + R+ + I+ + + +SR++G Sbjct: 42 QNVPSPVDVFAAALGLLQSPKLIAHVSSSLERVFAGYAIAAVVGIACGLIIGRSRKVGDF 101 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+ L++++ IP + ++ V+ F + +EL+ IF FT ++ + + + Sbjct: 102 LLAPLELLRPIPAVAWIPLAVLMFPS--------SELSMIFITFTGALFPILLNTVHGVE 153 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 + L ++S + + + +P + P +V + + M WF +V +EMI G Sbjct: 154 GVDPRLIAAAKSLGSTRRAMLFEVILPGAAPSIVTGLAIGMGTSWFCLVTAEMI-SGQF- 211 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR----PMIVWSNK 269 GIG Y A Q+ I+ M ++GV+ + L R +I W K Sbjct: 212 ----GIGYYTWEAYTLQNYPEIIVGM-AVIGVLGIGSSTLLRAVGNALIPWQKK 260 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV IA+++ I G+ IG + + +LL PA + PL V Sbjct: 70 SLERVFAGYAIAAVVGIACGLIIGRSRKVGDFLLAPLELLRPIPAVAWIPLAV------L 123 Query: 446 LNPNLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ LS++ I G + IL N + G A S T +ILPG Sbjct: 124 MFPSSELSMIFITFTGALFPILLNTVHGVEGVDPRLIAAAKSLGSTRRAMLFEVILPGAA 183 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P VTG G +W + +E+ S G G+G Y E+ ++PE+++G+ ++ Sbjct: 184 PSIVTGLAIGMGTSWFCLVTAEMIS-GQF-----GIGYYTWEAYTLQNYPEIIVGMAVI 236 >gi|150010418|ref|YP_001305161.1| glycine betaine/L-proline transport system permease [Parabacteroides distasonis ATCC 8503] gi|237708446|ref|ZP_04538927.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 9_1_42FAA] gi|149938842|gb|ABR45539.1| glycine betaine/L-proline transport system permease [Parabacteroides distasonis ATCC 8503] gi|229457667|gb|EEO63388.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 9_1_42FAA] Length = 271 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 16/159 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ ++LL A KS R +L P+LD MQ++P +L V++ Sbjct: 83 EETMQTLALVLSSTCMALLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVLF 142 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F G V GA IFA+ V +T + +P ++ E +RSF + Q + Sbjct: 143 F---GLGTVPGAFATIIFAM--PPVVRLT---GLGIRQVPENVIEAARSFGATPRQLLFK 194 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +P ++P G+ +MM++S VV S MI G Sbjct: 195 VQLPLALPTILTGINQTIMMALS----MVVVSAMISAGG 229 >gi|171910074|ref|ZP_02925544.1| putative integral membrane components of the ABC transporters [Verrucomicrobium spinosum DSM 4136] Length = 255 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 11/203 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL + A T+ R+L I L L A+SR L + + +Q++P + ++ Sbjct: 50 SLAESAWVTSKRLLIGYAIGCLLGLPMGLLTARSRWLSDTVGVLALGLQTLPSVCWVPLA 109 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F +E A +F + +W++ ++ + N+P +R+ G+ Sbjct: 110 LLWFGQ--------SEAAMLFVVVMGTLWSVLIAVDNGVRNLPPIYVRAARTMGSQGFHT 161 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P S+P +V M + W ++A+E+ V T++ G+G + + + Sbjct: 162 LRSVILPASLPYVVSGMKQGWAFAWRSLMAAEIYV---TILTGYGLGHLLHFGRELNSMD 218 Query: 240 AILYAMLTMLGVIFLYDQLLFRP 262 ++ ML ++ + L D++LF P Sbjct: 219 QVIGVMLVIVLIGLLADKVLFSP 241 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 9/193 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T R+++ I ++ +P+G+ +S + A L P+ + PL + + Sbjct: 57 VTSKRLLIGYAIGCLLGLPMGLLTARSRWLSDTVGVLALGLQTLPSVCWVPLAL----LW 112 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +++ GT W +L V G P + A + G+ R +ILP P Sbjct: 113 FGQSEAAMLFVVVMGTLWSVLIAVDNGVRNLPPIYVRAARTMGSQGFHTLRSVILPASLP 172 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGAYIAESTEKGSFPEVVLGVLIMC 563 Y V+G AW + + +E+ ++ + T GLG + E S +V+ +L++ Sbjct: 173 YVVSGMKQGWAFAWRSLMAAEI----YVTILTGYGLGHLLHFGRELNSMDQVIGVMLVIV 228 Query: 564 CFVLALNRFLWHP 576 L ++ L+ P Sbjct: 229 LIGLLADKVLFSP 241 >gi|149181988|ref|ZP_01860475.1| glycine betaine ABC transporter permease [Bacillus sp. SG-1] gi|148850333|gb|EDL64496.1| glycine betaine ABC transporter permease [Bacillus sp. SG-1] Length = 276 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 27/171 (15%) Query: 73 LSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L+ ++++ LF+ V L+AKS L V+ PILD MQ++P +L ++ F Sbjct: 94 LAVVIVATLFSIVLGVPLGILSAKSEALNKVVRPILDFMQTLPSFVYLIPAILLFGL--- 150 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E+ A+ + F ++ +P D+ E +R+F + WQ + +P + Sbjct: 151 -----GEVPAVISTFVFATPPAVRMTSLAIRQVPADMVEAARAFGSTSWQMLTKVQLPVA 205 Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 +P G+ +M+++S V+AS +I PG+GS + I Sbjct: 206 VPTIMAGINQTIMLALS---MAVIAS--------MIGAPGLGSTVLAGISS 245 >gi|70730544|ref|YP_260285.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344843|gb|AAY92449.1| ABC transporter, permease protein, putative [Pseudomonas fluorescens Pf-5] Length = 253 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 8/111 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ ++ +P+LG++ ++F N E + + + + + M + YQ LC + Sbjct: 95 PLFHSIRQVPMLGWIPLIAMWFGN--------GEFSKMLIVSLAAFYPMVLNTYQGLCQV 146 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 R EV + L+ Q+ ++ +P ++P + ++ +++ W V SE+ Sbjct: 147 ERRYREVGQVLVLNPAQRLRHILLPAALPSIATGLLQALAFAWVTAVGSEL 197 >gi|313109371|ref|ZP_07795334.1| putative permease of ABC taurine transporter [Pseudomonas aeruginosa 39016] gi|310881836|gb|EFQ40430.1| putative permease of ABC taurine transporter [Pseudomonas aeruginosa 39016] Length = 272 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + A + IP+G+ +G P + + P + P + PL+V Sbjct: 84 SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 143 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L +F +L AG + + W+ RY+ILP P Sbjct: 144 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 199 Query: 506 YVTGAITACGGAWNASIVSEV 526 +TG A G W+ + +E+ Sbjct: 200 VLTGLRIALGVGWSTLVAAEL 220 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 76 SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 135 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++F IG EL+ + I+ + + + + + R + R S WQ Sbjct: 136 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 187 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y+ +P ++P ++ + +++ GW +VA+E+I Sbjct: 188 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 221 >gi|146312799|ref|YP_001177873.1| glycine betaine transporter membrane protein [Enterobacter sp. 638] gi|145319675|gb|ABP61822.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] Length = 355 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|186472306|ref|YP_001859648.1| choline ABC transporter, permease protein [Burkholderia phymatum STM815] gi|184194638|gb|ACC72602.1| choline ABC transporter, permease protein [Burkholderia phymatum STM815] Length = 301 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+F AAK++ + MV+ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTLISLVFGIPLGIWAAKNKHVQMVVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLTSL-----GIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|71734144|ref|YP_276955.1| histidine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554697|gb|AAZ33908.1| histidine ABC transporter, permease protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 283 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 23/196 (11%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 +MP G+ MM++S M+V+ ++I G+G + + I+ +L L Sbjct: 206 LAMPSIMAGINQTTMMALS----------MVVIA-SMIGARGLGEDVLVGIQTLNLGRGL 254 Query: 243 YAMLTMLGVIFLYDQL 258 A L ++ + + D++ Sbjct: 255 EAGLAIVILAVVIDRI 270 >gi|300924083|ref|ZP_07140077.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|301330780|ref|ZP_07223378.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|300419679|gb|EFK02990.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300843293|gb|EFK71053.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|320201610|gb|EFW76186.1| Taurine transport system permease protein TauC [Escherichia coli EC4100B] Length = 275 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|190894928|ref|YP_001985221.1| putative glycine betaine/L-proline ABC transporter permease [Rhizobium etli CIAT 652] gi|190700589|gb|ACE94671.1| probable glycine betaine/L-proline ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 295 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 17/193 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT + V+S+ L A+S RL ++ PILD+MQ++P +L V M L Sbjct: 102 RTVSMIFVCTVLSIAIGIPIGILMARSDRLQRIVNPILDVMQTMPSFVYLIPVV---MLL 158 Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GKV G I+AI ++ ++ + + +D+ E + +F S QK + + + Sbjct: 159 GIGKVPGLIAVVIYAIPPMIRLTDLGIRL------VDKDVLEAADAFGTSRSQKLFKVQL 212 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P ++ + ++ VV + MI V G+G + AI Q ++ Sbjct: 213 PLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNG 265 Query: 246 LTMLGVIFLYDQL 258 L ++G+ ++D++ Sbjct: 266 LAIVGIAIIFDRV 278 >gi|26246370|ref|NP_752409.1| taurine transporter subunit [Escherichia coli CFT073] gi|218688234|ref|YP_002396446.1| taurine transporter subunit [Escherichia coli ED1a] gi|227884628|ref|ZP_04002433.1| taurine transporter subunit [Escherichia coli 83972] gi|300988135|ref|ZP_07178572.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301049560|ref|ZP_07196514.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|306813164|ref|ZP_07447357.1| taurine transporter subunit [Escherichia coli NC101] gi|331656421|ref|ZP_08357383.1| taurine transport system permease protein TauC [Escherichia coli TA206] gi|26106768|gb|AAN78953.1|AE016756_136 Taurine transport system permease protein tauC [Escherichia coli CFT073] gi|218425798|emb|CAR06604.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|222032167|emb|CAP74906.1| Taurine transport system permease protein tauC [Escherichia coli LF82] gi|227838714|gb|EEJ49180.1| taurine transporter subunit [Escherichia coli 83972] gi|300298651|gb|EFJ55036.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300407549|gb|EFJ91087.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|305853927|gb|EFM54366.1| taurine transporter subunit [Escherichia coli NC101] gi|307552275|gb|ADN45050.1| taurine transport system permease protein TauC [Escherichia coli ABU 83972] gi|312944948|gb|ADR25775.1| taurine transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315294163|gb|EFU53514.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|331054669|gb|EGI26678.1| taurine transport system permease protein TauC [Escherichia coli TA206] Length = 275 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 83 SLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|329905904|ref|ZP_08274285.1| Nitrate ABC transporter, permease protein [Oxalobacteraceae bacterium IMCC9480] gi|327547435|gb|EGF32258.1| Nitrate ABC transporter, permease protein [Oxalobacteraceae bacterium IMCC9480] Length = 307 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG +S P LL + P + + + Sbjct: 116 SLKRVGMGFGLAAVVGIPLGFAIGRFKFMSGMFGPIISLLKPVSPLAWLP--IGLLVFKA 173 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +P S+ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 174 ADPAAIWSIFIC--SIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKILFPSVLPY 231 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 232 MLTGVRLAIGTAWLVIVAAEMLTGG 256 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F A+ AAI++IF +W M + + + Sbjct: 150 PIISLLKPVSPLAWLPIGLLVFK--------AADPAAIWSIFICSIWPMIINTAVGVQRV 201 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 202 PQDYMNVARVLNLSEWKVLTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG 256 >gi|296387539|ref|ZP_06877014.1| taurine ABC transporter permease [Pseudomonas aeruginosa PAb1] Length = 262 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + A + IP+G+ +G P + + P + P + PL+V Sbjct: 74 SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 133 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L +F +L AG + + W+ RY+ILP P Sbjct: 134 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 189 Query: 506 YVTGAITACGGAWNASIVSEV 526 +TG A G W+ + +E+ Sbjct: 190 VLTGLRIALGVGWSTLVAAEL 210 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 66 SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 125 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++F IG EL+ + I+ + + + + + R + R S WQ Sbjct: 126 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 177 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y+ +P ++P ++ + +++ GW +VA+E+I Sbjct: 178 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 211 >gi|332761727|gb|EGJ92006.1| taurine transport system permease protein tauC [Shigella flexneri 2747-71] gi|332768548|gb|EGJ98730.1| binding--dependent transport system inner membrane component family protein [Shigella flexneri 2930-71] Length = 273 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 79 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 138 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 139 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 194 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 195 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 233 >gi|206580359|ref|YP_002236982.1| glycine betaine/L-proline ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288933940|ref|YP_003437999.1| binding-protein-dependent transporters inner membrane component [Klebsiella variicola At-22] gi|290510982|ref|ZP_06550351.1| glycine betaine/L-proline ABC transporter, permease [Klebsiella sp. 1_1_55] gi|206569417|gb|ACI11193.1| glycine betaine/L-proline ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288888669|gb|ADC56987.1| binding-protein-dependent transport systems inner membrane component [Klebsiella variicola At-22] gi|289775975|gb|EFD83974.1| glycine betaine/L-proline ABC transporter, permease [Klebsiella sp. 1_1_55] Length = 355 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|170724167|ref|YP_001751855.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] gi|169762170|gb|ACA75486.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] Length = 260 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 18/159 (11%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYIL 465 IG + P ++L PA + PL + + P+ LS++ I G + IL Sbjct: 88 IGRSQWAEDTLLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMVFITFTGALFPIL 141 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPGIFPYYVTGAITACGGAWNASIV 523 N + G A D + VAS+ + RW R ++LPG P VTG G +W + Sbjct: 142 LNTVHGVEAV--DPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVT 199 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +E+ S G G+G Y ES ++P++++G+L++ Sbjct: 200 AEMIS-GQF-----GIGYYTWESYTLQNYPDIIVGMLLI 232 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 25/115 (21%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L+P L++++ IP + ++ ++ F + +EL+ +F FT ++ + + + Sbjct: 97 TLLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMVFITFTGALFPILLNTVHGV 148 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + L +RS W + +P ++P +V + + M WF +V +EMI Sbjct: 149 EAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMI 203 >gi|49083481|gb|AAT51045.1| PA3936 [synthetic construct] Length = 273 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + A + IP+G+ +G P + + P + P + PL+V Sbjct: 84 SLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGE 143 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L +F +L AG + + W+ RY+ILP P Sbjct: 144 LSKVL-LIYLALFAP---LLIATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPE 199 Query: 506 YVTGAITACGGAWNASIVSEV 526 +TG A G W+ + +E+ Sbjct: 200 VLTGLRIALGVGWSTLVAAEL 220 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 76 SLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLI 135 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++F IG EL+ + I+ + + + + + R + R S WQ Sbjct: 136 VIWFG-------IG-ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQV 187 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y+ +P ++P ++ + +++ GW +VA+E+I Sbjct: 188 VRYVILPSALPEVLTGLRIALGVGWSTLVAAELI 221 >gi|116749648|ref|YP_846335.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] gi|116698712|gb|ABK17900.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] Length = 290 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 26/226 (11%) Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 QSI +++ + Y+ V + ++FRV++ AS I IP+G+ +G+ + P Sbjct: 80 QSIKTVMDPWYYKSVYH-------SLFRVLLGFCTASAIAIPLGLTMGWNRIVRDLTMPG 132 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 +L + P + PL + + + + + G + + N GA + Sbjct: 133 FELFRSVPPVAWVPLSIIIFAQMEYS----IVFITFTGAFFVVALNAKLGAESIDQSLFR 188 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A + +R+I+LPG P G G AW + +E+ + + GLG Sbjct: 189 AAWCLGANPRQVFRHILLPGSLPSIFMGLALGMGIAWQTVVAAEMIAGQY------GLGY 242 Query: 542 YIAESTEKGSFPEVVL-----GVLIMCCFVL---ALNRFL-WHPLY 578 ES FPEV+L GVL C + N++L W +Y Sbjct: 243 LAWESYSLIRFPEVILAMASIGVLGYVCSAILRGIANKYLAWRKVY 288 >gi|292655752|ref|YP_003535649.1| putative sulfonate ABC transporter permease [Haloferax volcanii DS2] gi|291372837|gb|ADE05064.1| ABC-type transport system permease protein (probable substrate sulfonate) [Haloferax volcanii DS2] Length = 289 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 19/169 (11%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 R+ V P+ +++ IP L ++ F V++ + G A F + W +S Sbjct: 127 RVDSVFTPVTRLLRPIPPLAWIGFAVIWLGVNHQG--------ATFIVAIGSFWINFYSA 178 Query: 155 YQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y + + DL+EV+ + + W + +P + P ++ + S+ W VVA+E+I Sbjct: 179 YGGVEGVSEDLKEVAATLGVDDDWTMIRKVVIPAASPSIMTGIRTSIGQCWMIVVAAELI 238 Query: 214 VVGDTVIPLPGIG-SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 V G+G Y L + + + A + ++ ++FL LFR Sbjct: 239 V---------GVGVGYEILNTAQNLAMDVSVAYMLVISIVFLVSDGLFR 278 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 5/142 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V ++I + + + GI +G+ + S P +LL P + V + H Sbjct: 100 SLYHYVPGLLIGTSLGVFAGIAMGWNTRVDSVFTPVTRLLRPIPPLAWIGFAVIWLGVNH 159 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFP 504 + ++ G+ W ++ G D KEVA++ + W R +++P P Sbjct: 160 QGA----TFIVAIGSFWINFYSAYGGVEGVSEDLKEVAATLGVDDDWTMIRKVVIPAASP 215 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG T+ G W + +E+ Sbjct: 216 SIMTGIRTSIGQCWMIVVAAEL 237 >gi|253998658|ref|YP_003050721.1| binding-protein-dependent transport systems inner membrane component [Methylovorus sp. SIP3-4] gi|253985337|gb|ACT50194.1| binding-protein-dependent transport systems inner membrane component [Methylovorus sp. SIP3-4] Length = 320 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S++ +P+GI G +S +PF + PA F L V+ + Y P + + + Sbjct: 135 VISSLVGVPLGILAGTYSAVSRLFEPFIEFFRYLPAPAFGALAVAVLGIYD-GPKIAIIV 193 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + F Q I+ N E A + + W+ R++++PG+ P Sbjct: 194 IGTFFQQVLIISNT---TRKLDYSLLEAAMTLGTSRWKLLRHVVIPGVLPELYRDQRILL 250 Query: 515 GGAWNASIVSEV 526 G AW IV+E+ Sbjct: 251 GWAWTYLIVAEL 262 >gi|88856241|ref|ZP_01130901.1| hypothetical protein A20C1_03056 [marine actinobacterium PHSC20C1] gi|88814560|gb|EAR24422.1| hypothetical protein A20C1_03056 [marine actinobacterium PHSC20C1] Length = 283 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/151 (21%), Positives = 72/151 (47%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + +T R+L + + V A + S R+ + P L ++++P L ++ +Y Sbjct: 88 QHVAISTQRVLVGFAVGSVVGLVLAAIVGLSTRVSELFAPTLGALRAVPSLAWVPLLGLY 147 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 KV + A F ++T ++ +L ++ L E+ RS+ SG Sbjct: 148 LGYGEDPKVALIAIGAFFPVYT--------TVASALRHVDAHLVELGRSYGYSGPALLSL 199 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P +P ++ ++ ++++ W F+VA E++ Sbjct: 200 VQLPAVVPAVISSLRLALAQAWLFLVAGELL 230 >gi|119385086|ref|YP_916142.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119374853|gb|ABL70446.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] Length = 260 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 55/267 (20%), Positives = 114/267 (42%), Gaps = 16/267 (5%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 PP + + P + +LA +LV + + L Q P ++ + L A Sbjct: 7 PPSLRPGLVPGVLSILAMLLVWTLASQLTDRPQTLPAPWEVAARIMRLGASGELWFNAGM 66 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126 T R++++ +++ +SR L P L I+ ++P L + ++ +N Sbjct: 67 TLFRVVASFALAMAAGMALGLWMGRSRGADQWLNPGLIILLNVPALVVIVLCYIWIGLN- 125 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 E AAI A+ +++ +T + + + DL++++R+FR+ W + ++ +P Sbjct: 126 --------ETAAILAVALNKIPVVTVMIREGTRALRPDLDDMARAFRMRPWARLRHVVLP 177 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 P + + +S W V+ E + + G+G I L D+ +L L Sbjct: 178 QLAPHVAASARAGISLIWKIVLVVEFLGRSN------GVGFKIHLLFSSFDVEGVLAWAL 231 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLE 273 + V+ D +L RP +N++R + Sbjct: 232 AFVAVMLAIDLILLRPWESRANRWRQD 258 >gi|253582359|ref|ZP_04859582.1| ABC transporter permease [Fusobacterium varium ATCC 27725] gi|251835898|gb|EES64436.1| ABC transporter permease [Fusobacterium varium ATCC 27725] Length = 287 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 23/191 (12%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+A+ ISLL F L + + ++ + PILD MQ++P+ +L V++F V Sbjct: 103 VLAAVFISLLLGFPIGILISGNDKINGFVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAV 162 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 I + AI + + + +++ E +R+F + +Q W + +P ++P Sbjct: 163 IATTIYAIVPVIRLT--------SHGIRQVDKEVVEAARAFGSTKFQTLWKVQIPQALPT 214 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 G+ +MM+M+ +VV ++I G+G + + + ++ L A Sbjct: 215 IMTGVNQTLMMAMA-----------MVVTCSMIGASGLGMEVLIGVNRIEIGRGLVAGTA 263 Query: 248 MLGVIFLYDQL 258 ++ V L D++ Sbjct: 264 VVIVAILMDRI 274 >gi|238896133|ref|YP_002920869.1| glycine betaine transporter membrane protein [Klebsiella pneumoniae NTUH-K2044] gi|238548451|dbj|BAH64802.1| glycine/betaine/proline transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 355 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|261820839|ref|YP_003258945.1| nitrate ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261604852|gb|ACX87338.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 304 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 143 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 194 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V+R +LS + + +P +P ++ + +S+ W +VA+EM+ Sbjct: 195 EGVRRIPQDYLNVARVLKLSEFTIMHKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTG 254 Query: 216 G 216 G Sbjct: 255 G 255 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ IP G IG +++ + P LL + P + Sbjct: 110 WNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 167 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + P S + + W ++ N G P D+ VA ++ + I+LP Sbjct: 168 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMHKILLP 225 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530 + P +TG + G AW + +E+ + G Sbjct: 226 AVLPNVLTGVRLSIGVAWLVIVAAEMLTGG 255 >gi|288960217|ref|YP_003450557.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] gi|288912525|dbj|BAI74013.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] Length = 281 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 22/219 (10%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L VH L R L LS ++ L + L +RRL P L +++IP + + Sbjct: 79 LSVHILATLG-RVGLGFLSGVLAGTLLGALTGYLTV-ARRL---FDPTLQALRAIPSIAW 133 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + +++F K+I + F I+ ++ ++ + R L EV R FR+S Sbjct: 134 VPLFILWFGIFETSKIILIAVGVFFPIY--------LALSGAIQGVDRKLVEVGRIFRMS 185 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 G + W + +P ++P + + + GW FVVA+E + + G+G + Sbjct: 186 GVELVWRILLPATLPSYLLALRAGLGLGWMFVVAAEFMGASE------GLGFLLTDGQMT 239 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFR 271 IL ++L + L D LL RP++ W + F+ Sbjct: 240 GQPQTILASILAFAVLGKLSDGLLAALSRPLLRWQDSFK 278 >gi|262278786|ref|ZP_06056571.1| taurine transporter [Acinetobacter calcoaceticus RUH2202] gi|262259137|gb|EEY77870.1| taurine transporter [Acinetobacter calcoaceticus RUH2202] Length = 289 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VA+E++ Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234 >gi|269925524|ref|YP_003322147.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] gi|269789184|gb|ACZ41325.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] Length = 271 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 8/117 (6%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 V+ + A R + +L P + Q++P++ ++F GKVI L F I Sbjct: 98 VFGYILAHWRAVERLLSPHIAASQALPVVAIAPLITLWFGYGLLGKVIVCALVVFFPILV 157 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + + N+PRDL EV++ + WQ FW + +P S+P L+ + + ++ Sbjct: 158 NTI--------VGIRNVPRDLIEVAQVYGAGWWQTFWMVELPLSLPVLLGGIRLGLT 206 >gi|330013350|ref|ZP_08307621.1| glycine betaine/L-proline transport system permease protein ProW [Klebsiella sp. MS 92-3] gi|328533538|gb|EGF60261.1| glycine betaine/L-proline transport system permease protein ProW [Klebsiella sp. MS 92-3] Length = 355 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|323178374|gb|EFZ63952.1| taurine transport system permease protein tauC [Escherichia coli 1180] Length = 252 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 60 SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGE 119 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 120 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 175 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 176 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 212 >gi|296101975|ref|YP_003612121.1| nitrate ABC transporter, inner membrane subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056434|gb|ADF61172.1| nitrate ABC transporter, inner membrane subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 293 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 138 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 189 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 190 PQDYLNVARVLQLSEWTILRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 244 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 18/203 (8%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV V +A+++ IP+G IG S P LL + P + Sbjct: 99 WNVLASLQRVAVGFGLAALVGIPLGFLIGRFTFFSRMFSPLIALLRPVSPLAWLP--IGL 156 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + P S + + W ++ N G P D+ VA ++ W R I+ P Sbjct: 157 LLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTILRRILFP 214 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV----- 555 + P +TG + G AW + +E+ + G G+G +I + + Sbjct: 215 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 268 Query: 556 ---VLGVLIMCCFVLALNRFLWH 575 V+G+L+ +L RF W Sbjct: 269 IIGVVGLLLEQGLMLIARRFSWQ 291 >gi|320326290|gb|EFW82343.1| histidine ABC transporter, permease protein, putative [Pseudomonas syringae pv. glycinea str. B076] gi|320331710|gb|EFW87648.1| histidine ABC transporter, permease protein, putative [Pseudomonas syringae pv. glycinea str. race 4] gi|330872451|gb|EGH06600.1| histidine ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 283 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|312866168|ref|ZP_07726389.1| phosphate ABC transporter, permease protein PstC [Streptococcus downei F0415] gi|311098572|gb|EFQ56795.1| phosphate ABC transporter, permease protein PstC [Streptococcus downei F0415] Length = 311 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 5/132 (3%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +R +L P ++++ IP + GF+ VV + L+ G G L+ +F +F + Sbjct: 119 KRGARLLQPTIELLTGIPSVVYGFIGLQVVVPFVRTLFGGTGFGI-LSGVFVLFVMILPT 177 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +TF SL ++PR E S + + WQ W + + + PG+ ++ M+ + +A Sbjct: 178 VTFMTTDSLRSVPRHYREASLAMGATRWQTIWRVVLRAAKPGIFTAVVFGMARAFGEALA 237 Query: 210 SEMIVVGDTVIP 221 +M+V V+P Sbjct: 238 IQMVVGNSPVMP 249 >gi|299770270|ref|YP_003732296.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter sp. DR1] gi|298700358|gb|ADI90923.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter sp. DR1] Length = 284 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNITTGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 47/250 (18%), Positives = 107/250 (42%), Gaps = 23/250 (9%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 L F + +GI+N P D++ + + + ++ + R++ V++ Sbjct: 49 GLAQFKINLGIVNF-----SNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAA 103 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L LA + ++L L+P L++++ IP + ++ ++ F + +E + IF Sbjct: 104 LIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIF 155 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 F ++ + + + + L ++S S + + +P ++P + + + M Sbjct: 156 ITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNITTGLSIGM 215 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 WF +V +EMI GIG + + Q+ I+ M+ ++G + ++ L Sbjct: 216 GTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLV 268 Query: 261 RPMIVWSNKF 270 R V N+F Sbjct: 269 R---VIGNRF 275 >gi|302554022|ref|ZP_07306364.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] gi|302471640|gb|EFL34733.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] Length = 287 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 16/188 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT R+L+ + ++ L + L P+LD + +P L L F+N++ Sbjct: 90 TTRRVLAGYAVGTAAGYLLGLLMGSLPLVRAALEPLLDALYVVPKLALLPV----FLNMF 145 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G G ++A + A VW T S ++ +P + R F S WQ F ++ +P Sbjct: 146 -GLGEGPQVALVAATVFFFVWISTMS---AVMAVPDGHRDAGRVFGASPWQMFRHVLLPA 201 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245 S+P ++ ++ +VASE I D G+G I + A+ + D++ + Sbjct: 202 SLPAVLVGARIAAGVAVLVIVASEQIAASD------GLGHLIFDSRALFQNDVMFVGIVC 255 Query: 246 LTMLGVIF 253 + +LGV+F Sbjct: 256 VAVLGVLF 263 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 12/166 (7%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G+ +G P + + ++P L P P+ ++ P + L +F ++ Sbjct: 108 LGLLMGSLPLVRAALEPLLDALYVVPKLALLPVFLNMFGLGE-GPQVALVAATVF---FF 163 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + + ++ A P+ ++ F + W+ +R+++LP P + GA A G A + Sbjct: 164 VWISTMSAVMAVPDGHRDAGRVFGASPWQMFRHVLLPASLPAVLVGARIAAGVAVLVIVA 223 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 SE + + GLG I +S + F V+ V I+C VL + Sbjct: 224 SEQIA------ASDGLGHLIFDS--RALFQNDVMFVGIVCVAVLGV 261 >gi|253689108|ref|YP_003018298.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755686|gb|ACT13762.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 304 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 143 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 194 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V+R +LS + + +P +P ++ + +S+ W +VA+EM+ Sbjct: 195 EGVRRIPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTG 254 Query: 216 G 216 G Sbjct: 255 G 255 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ IP G IG +++ + P LL + P + Sbjct: 110 WNVLASLQRVGIGFGLAALVGIPTGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 167 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + P S + + W ++ N G P D+ VA ++ + R I+LP Sbjct: 168 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMRKILLP 225 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530 + P +TG + G AW + +E+ + G Sbjct: 226 AVLPNVLTGVRLSIGVAWLVIVAAEMLTGG 255 >gi|91775909|ref|YP_545665.1| binding-protein-dependent transport systems inner membrane component [Methylobacillus flagellatus KT] gi|91709896|gb|ABE49824.1| binding-protein-dependent transport systems inner membrane component [Methylobacillus flagellatus KT] Length = 260 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/216 (20%), Positives = 97/216 (44%), Gaps = 16/216 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + L Q + + R ++I F + A R +++ P+ +++ +P++G Sbjct: 56 ISTGELQQGVAASLQRAFLGLLIGGSIGFGVGAVMALWRVADILIGPLYHMLRQVPLMGL 115 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + ++ N P K++ L+A + M + Y+SL + +EV ++L Sbjct: 116 VPLFSLWLGNGDPSKLLVVCLSAFYP--------MVLATYESLHQVEEKYKEVGDVYKLG 167 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAI 233 + F+ + +P ++P + + +++ W + SE++ G+G+ + A A Sbjct: 168 RSKTFFKILLPAALPSIFTGVSFALAFAWLATIGSEILFSAGA-----GLGNIMMNAQAA 222 Query: 234 KEQDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSN 268 D+L IL A++ +LG + L Q + R + W N Sbjct: 223 SRMDILIILTALIGLLGYLMNLLIQQVGRYLFRWRN 258 >gi|332707644|ref|ZP_08427672.1| CUT1 family carbohydrate ABC transporter, TC 3.A.1.1.-, membrane protein 2 [Lyngbya majuscula 3L] gi|332353553|gb|EGJ33065.1| CUT1 family carbohydrate ABC transporter, TC 3.A.1.1.-, membrane protein 2 [Lyngbya majuscula 3L] Length = 275 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 10/133 (7%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 S LG++L ++ Q I G+L + ++N Y G ++ + + A F Sbjct: 103 GNSLLLGIILAVLMIPGQVTLIPGYLILKSLGWLNTYQGLIVPSAVNATF---------- 152 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 F M Q N P++LEE + LS W+ FW + +P + P L + G W + Sbjct: 153 IFMMRQFFINFPKELEEAAALDGLSRWETFWQVVLPLAKPALAAQAIFIFMGSWNNFLMP 212 Query: 211 EMIVVGDTVIPLP 223 MI + LP Sbjct: 213 LMITSDPGMFTLP 225 >gi|325846755|ref|ZP_08169670.1| glycine betaine transport system permease protein opuAB [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481513|gb|EGC84554.1| glycine betaine transport system permease protein opuAB [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 280 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149 +KS + V++P+LD MQ++P +L V +F + + PG + A A+ + + Sbjct: 118 SKSESVEKVIMPLLDFMQTMPAFVYLIPAVSFFGIGMAPGVISSVIFAMPPAVRMTNL-- 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + +P DL E + SF + QK + L +P + P G+ +M+++S Sbjct: 176 -------GIKEVPSDLVEAADSFGSTPKQKLFELELPMAKPSIMAGINQTLMLTLS---- 224 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+VV ++I PG+G+ I ++ D+ Sbjct: 225 ------MVVVA-SMIGAPGLGNVIYTSVSRNDV 250 >gi|332716766|ref|YP_004444232.1| glycine betaine ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gi|325063451|gb|ADY67141.1| glycine betaine ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 295 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 25/187 (13%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 V+S++ A+S RL ++ P+LD+MQ++P +L V M L G+V G Sbjct: 112 VLSIVIGLPIGIAMARSNRLQSIVNPVLDVMQTMPSFVYLIPVV---MLLGIGRVPGVIA 168 Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191 I+AI ++ N+ M + RD+ E + ++ S QK + + +P ++P G Sbjct: 169 VVIYAIPPMIRLTNLGIRM------VDRDVLEAADAYGSSKRQKLFKVQLPLALPTIMAG 222 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + +MM+++ M+V+ ++I + G+G + AI Q ++ L ++G+ Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGVFNGLAIVGI 271 Query: 252 IFLYDQL 258 ++D++ Sbjct: 272 AIIFDRI 278 >gi|291458647|ref|ZP_06598037.1| taurine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419180|gb|EFE92899.1| taurine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 242 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 21/212 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L+ + L V S ++ PI++ ++ +PI+ ++ ++V+F Sbjct: 48 TLCRVLTGTFYAALIGTVLGLSMGYSETALQLISPIVNSIRQVPIMAWVPLSIVWFGL-- 105 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E +F IF S V+ + + + +I R+ ++S + + VP Sbjct: 106 ------GEGPTVFLIFMSAVFPLILNTVSGVSSIDRNYINAAKSMGAGTAAIYRDIIVPG 159 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +MPG + + +++ GW V+ +E I G G Y+ + +++ + LY+++ Sbjct: 160 AMPGFLTGLRLAVGAGWMSVICAEFIATNK------GFG-YLLIEAQQRLQTSKLYSLMI 212 Query: 248 MLGVIFLY-DQ---LLFRPMIVWSNKFRLERT 275 M ++ L+ DQ LL R + W +FR +T Sbjct: 213 MSALVGLFIDQLIRLLERKLTGW--RFRNGKT 242 Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 +++G + +T VL + IT+ RV+ A++I +G+ +G+ I P Sbjct: 27 ETMGEFLRDWTEPRVLLNL---GITLCRVLTGTFYAALIGTVLGLSMGYSETALQLISPI 83 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFK 480 + P + PL + ++ L ++ +IF + + ++ N ++G S+ ++ Sbjct: 84 VNSIRQVPIMAWVPL---SIVWFGLGEGP--TVFLIFMSAVFPLILNTVSGVSSIDRNYI 138 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 A S +R II+PG P ++TG A G W + I +E Sbjct: 139 NAAKSMGAGTAAIYRDIIVPGAMPGFLTGLRLAVGAGWMSVICAE 183 >gi|15800097|ref|NP_286109.1| taurine transporter subunit [Escherichia coli O157:H7 EDL933] gi|15829675|ref|NP_308448.1| taurine transporter subunit [Escherichia coli O157:H7 str. Sakai] gi|168749817|ref|ZP_02774839.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168756896|ref|ZP_02781903.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168761559|ref|ZP_02786566.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168768305|ref|ZP_02793312.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168776340|ref|ZP_02801347.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168783220|ref|ZP_02808227.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168786200|ref|ZP_02811207.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168800237|ref|ZP_02825244.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|195938570|ref|ZP_03083952.1| taurine transporter subunit [Escherichia coli O157:H7 str. EC4024] gi|208806945|ref|ZP_03249282.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208815515|ref|ZP_03256694.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208823125|ref|ZP_03263443.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209398897|ref|YP_002269008.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|218703651|ref|YP_002411170.1| taurine transporter subunit [Escherichia coli UMN026] gi|254791547|ref|YP_003076384.1| taurine transporter subunit [Escherichia coli O157:H7 str. TW14359] gi|261223846|ref|ZP_05938127.1| taurine transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256054|ref|ZP_05948587.1| taurine transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291281274|ref|YP_003498092.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease [Escherichia coli O55:H7 str. CB9615] gi|293403487|ref|ZP_06647578.1| taurine transporter subunit [Escherichia coli FVEC1412] gi|298379098|ref|ZP_06988979.1| taurine transporter subunit [Escherichia coli FVEC1302] gi|300900424|ref|ZP_07118594.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|12513208|gb|AAG54717.1|AE005216_5 taurine transport system permease protein [Escherichia coli O157:H7 str. EDL933] gi|13359878|dbj|BAB33844.1| taurine transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|187768289|gb|EDU32133.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188015903|gb|EDU54025.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188999409|gb|EDU68395.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189355970|gb|EDU74389.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189362454|gb|EDU80873.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189368092|gb|EDU86508.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189373670|gb|EDU92086.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189377398|gb|EDU95814.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|208726746|gb|EDZ76347.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208732163|gb|EDZ80851.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208737318|gb|EDZ85002.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209160297|gb|ACI37730.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209744494|gb|ACI70554.1| taurine transport system permease protein [Escherichia coli] gi|209744496|gb|ACI70555.1| taurine transport system permease protein [Escherichia coli] gi|209744498|gb|ACI70556.1| taurine transport system permease protein [Escherichia coli] gi|209744500|gb|ACI70557.1| taurine transport system permease protein [Escherichia coli] gi|209744502|gb|ACI70558.1| taurine transport system permease protein [Escherichia coli] gi|218430748|emb|CAR11622.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|254590947|gb|ACT70308.1| taurine transporter subunit, membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|284920175|emb|CBG33234.1| taurine ABC transporter, permease protein [Escherichia coli 042] gi|290761147|gb|ADD55108.1| ABC-type nitrate/sulfonate/bicarbonate transpo rt system, permease component [Escherichia coli O55:H7 str. CB9615] gi|291429340|gb|EFF02360.1| taurine transporter subunit [Escherichia coli FVEC1412] gi|298280211|gb|EFI21715.1| taurine transporter subunit [Escherichia coli FVEC1302] gi|300356070|gb|EFJ71940.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|320192777|gb|EFW67417.1| Taurine transport system permease protein TauC [Escherichia coli O157:H7 str. EC1212] gi|320638358|gb|EFX08072.1| taurine transporter subunit [Escherichia coli O157:H7 str. G5101] gi|320643739|gb|EFX12862.1| taurine transporter subunit [Escherichia coli O157:H- str. 493-89] gi|320649089|gb|EFX17667.1| taurine transporter subunit [Escherichia coli O157:H- str. H 2687] gi|320655982|gb|EFX23898.1| taurine transporter subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662539|gb|EFX29928.1| taurine transporter subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320665109|gb|EFX32202.1| taurine transporter subunit [Escherichia coli O157:H7 str. LSU-61] gi|326341125|gb|EGD64917.1| Taurine transport system permease protein TauC [Escherichia coli O157:H7 str. 1044] gi|326346100|gb|EGD69839.1| Taurine transport system permease protein TauC [Escherichia coli O157:H7 str. 1125] Length = 275 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|290509885|ref|ZP_06549256.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp. 1_1_55] gi|289779279|gb|EFD87276.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp. 1_1_55] Length = 522 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ + IP LG++ +V F G G +LA I + V M + Q++ ++ Sbjct: 106 PLFYALAQIPTLGWIPLLMVLF-----GIDNGLKLAVIV---KTTVVPMIINTQQAVASV 157 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 P+ L E R S WQ+ +L +P S+PG + +++S W ++ E++ + + Sbjct: 158 PQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSEGI 215 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 13/152 (8%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 R G + P L++++ I + +L + N GK++ LA+ F +F FS Sbjct: 355 RAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFFPMF--------FST 406 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 Q++ L+EV+R RL + + + +P + PG+ + +++ W + +E + Sbjct: 407 LQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFM 466 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 GIGS + A + D+ IL M+ Sbjct: 467 SSGV-----GIGSLMINAQQLLDMPTILCGMV 493 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 4/123 (3%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G G P + +++P LA P + PL++ + ++ L L+++ + T Sbjct: 90 LGALFGLVPAAAQRVEPLFYALAQIPTLGWIPLLMVL---FGIDNGLKLAVI-VKTTVVP 145 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ++ N ++ P E + + W+ R++++P P + TG A AW + IV Sbjct: 146 MIINTQQAVASVPQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIV 205 Query: 524 SEV 526 E+ Sbjct: 206 VEL 208 >gi|152971536|ref|YP_001336645.1| glycine betaine transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956385|gb|ABR78415.1| glycine/betaine/proline transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 355 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 227 TI---LGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|332853874|ref|ZP_08435033.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332865984|ref|ZP_08436752.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] gi|332728355|gb|EGJ59734.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332734914|gb|EGJ66001.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] Length = 284 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVV+ ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 42/226 (18%), Positives = 100/226 (44%), Gaps = 18/226 (7%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D++ + + + ++ + R++ V++ L LA + ++L L+P L Sbjct: 68 PLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPL 127 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++ IP + ++ ++ F + +E + IF F ++ + + + + Sbjct: 128 EVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPILLNTVHGVGAVDPR 179 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L ++S S + + +P ++P ++ + + M WF +V +EMI G Sbjct: 180 LVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQH------G 233 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 IG + + Q+ I+ M+ ++G + ++ L R V N+F Sbjct: 234 IGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275 >gi|227326127|ref|ZP_03830151.1| nitrate transporter permease component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 305 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 144 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 195 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V+R +LS + + +P +P ++ + +S+ W +VA+EM+ Sbjct: 196 EGVRRIPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTG 255 Query: 216 G 216 G Sbjct: 256 G 256 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ IP G IG +++ + P LL + P + Sbjct: 111 WNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 168 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + P S + + W ++ N G P D+ VA ++ + R I+LP Sbjct: 169 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMRKILLP 226 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530 + P +TG + G AW + +E+ + G Sbjct: 227 AVLPNVLTGVRLSIGVAWLVIVAAEMLTGG 256 >gi|225414562|ref|ZP_03761751.1| hypothetical protein CLOSTASPAR_05785 [Clostridium asparagiforme DSM 15981] gi|225041918|gb|EEG52164.1| hypothetical protein CLOSTASPAR_05785 [Clostridium asparagiforme DSM 15981] Length = 266 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 13/136 (9%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + + + ++ L EV+ ++R+ + + + VP S+P ++ + + MS W V Sbjct: 143 WPVLLNTVHGIQSVDNKLLEVAYTYRIPTLKTIFKIIVPSSIPAILTGLRLGMSNAWMSV 202 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY-DQLLFRPMIVW 266 VA+EMI GIG I L+ +E ++Y + ++GVI L+ D+ L R Sbjct: 203 VAAEMIASST------GIGYLITLS-RETANARVMYMCVLVIGVIGLFIDRGLTR----- 250 Query: 267 SNKFRLERTTGIYPAD 282 + L +T GI + Sbjct: 251 LEHYYLAKTRGITDSK 266 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 8/131 (6%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++ FG+ W +L N + G + N EVA ++ I + II+P P +TG Sbjct: 136 IIAFGSFWPVLLNTVHGIQSVDNKLLEVAYTYRIPTLKTIFKIIVPSSIPAILTGLRLGM 195 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573 AW + + +E+ + +TG+G I S E + + + VL++ L ++R L Sbjct: 196 SNAWMSVVAAEMIA------SSTGIGYLITLSRETANARVMYMCVLVIGVIGLFIDRGLT 249 Query: 574 -WHPLYLYGTR 583 YL TR Sbjct: 250 RLEHYYLAKTR 260 >gi|188534247|ref|YP_001908044.1| Aliphatic sulfonates transport permease protein [Erwinia tasmaniensis Et1/99] gi|188029289|emb|CAO97166.1| Aliphatic sulfonates transport permease protein [Erwinia tasmaniensis Et1/99] Length = 263 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + ++++IP L + +++F K+ L +F I+ + + + NI R Sbjct: 101 VQMLRNIPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSGW F + +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLIEMARSYGLSGWSLFIQVVLPGALPSIMVGVRFALGLMWL------TLIVAETISASS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + LL R + W ++L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SALLLERVWLRWHPAYQLKEET 262 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 21/205 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R V+ I I + +G+ G + Q+L P PLV+ + Sbjct: 63 AISSWRAVIGFSIGGSIGLVLGLITGVSKLGERLLDTSVQMLRNIPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G E+A S+ ++GW + ++LPG Sbjct: 120 FGIDESAKI-FLVALGTLFPIYINTWHGIRNIDRGLIEMARSYGLSGWSLFIQVVLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S ++G+G Y+A + + +VV+ +I+ Sbjct: 179 PSIMVGVRFALGLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILY 231 Query: 564 CFV--------LALNR--FLWHPLY 578 + L L R WHP Y Sbjct: 232 ALLGKLADVSALLLERVWLRWHPAY 256 >gi|325121890|gb|ADY81413.1| taurine transporter subunit [Acinetobacter calcoaceticus PHEA-2] Length = 289 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 97 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + ++ILP P+ Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQTQVFWHVILPTALPH 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266 Query: 566 VLALNRFL 573 ++ FL Sbjct: 267 AVSFELFL 274 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VA+E++ Sbjct: 180 LSHQLNRERAALSLGASQTQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234 >gi|227821372|ref|YP_002825342.1| hypothetical amino acid ABC-transporter ATP-binding protein [Sinorhizobium fredii NGR234] gi|227340371|gb|ACP24589.1| hypothetical amino acid ABC-transporter ATP-binding protein [Sinorhizobium fredii NGR234] Length = 295 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 93/187 (49%), Gaps = 25/187 (13%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 V+S+ + ++S R+ ++ P+LD+MQ++P +L V M L GKV G Sbjct: 112 VLSIAVGIPLGIIMSRSDRVQNIINPVLDVMQTMPSFVYLIPVV---MLLGIGKVPGLIA 168 Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191 I+AI ++ N+ + + +D+ E + +F S WQK + +P ++P G Sbjct: 169 VVIYAIPPMIRLTNLGIRL------VDKDVLEAADAFGSSSWQKLKNVQMPLALPTIMAG 222 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + +MM+++ M+V+ ++I + G+G + AI Q ++ L ++G+ Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGI 271 Query: 252 IFLYDQL 258 ++D++ Sbjct: 272 AIIFDRV 278 >gi|184157803|ref|YP_001846142.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acinetobacter baumannii ACICU] gi|332876491|ref|ZP_08444258.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] gi|183209397|gb|ACC56795.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii ACICU] gi|322508118|gb|ADX03572.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii 1656-2] gi|323517692|gb|ADX92073.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii TCDC-AB0715] gi|332735349|gb|EGJ66409.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] Length = 289 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 97 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + ++ILP P+ Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266 Query: 566 VLALNRFL 573 ++ FL Sbjct: 267 AVSFELFL 274 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VA+E++ Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234 >gi|298375042|ref|ZP_06984999.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_19] gi|298267542|gb|EFI09198.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_19] Length = 274 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ ++LL A S R +L P+LD MQ++P +L V++ Sbjct: 83 EETMQTLALVLSSTGMALLLGIPLGIWMAGSGRCNKILQPVLDCMQTMPAFVYLIPAVLF 142 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F G V GA IFA+ V +T L +P+++ E +RSF + Q + Sbjct: 143 F---GLGTVPGAFATIIFAL--PPVARLT---ALGLRQVPKNVVEAARSFGATPSQLLFK 194 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++P G+ +MMS+S VV + MI G G+G + + I + + Sbjct: 195 VELPLALPTILAGINQTIMMSLS----MVVVAAMISAG-------GLGEVVLIGITQMKI 243 >gi|145295416|ref|YP_001138237.1| hypothetical protein cgR_1353 [Corynebacterium glutamicum R] gi|140845336|dbj|BAF54335.1| hypothetical protein [Corynebacterium glutamicum R] Length = 260 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 12/150 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 R L L A +I L F L +S + + P++ +++ + L +L + + Sbjct: 76 RVLLGFLVAAIIPLPVGF----LLGRSTTIRWAVDPLVQVLRPVSPLAWLPLGLALLKD- 130 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 AE A+F I S +W + + ++ N+ ++ + W + Y+ +P Sbjct: 131 -------AENTAMFVIVLSALWPILINTIDAVRNVNPTYINLADTIGTPWWSRIIYIWLP 183 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 S+PG++ + +S+S W +V +EM+V G Sbjct: 184 ASLPGIITGLRLSLSTAWLVIVVAEMLVGG 213 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 7/157 (4%) Query: 373 YQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 YQD + + W ++ RV++ ++A+II +PVG +G I + P Q+L Sbjct: 57 YQDAPASVGIFWHLMSSLRRVLLGFLVAAIIPLPVGFLLGRSTTIRWAVDPLVQVLRPVS 116 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + PL ++ + N + +++ W IL N I + +A + Sbjct: 117 PLAWLPLGLALLKDAE-NTAM---FVIVLSALWPILINTIDAVRNVNPTYINLADTIGTP 172 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 W YI LP P +TG + AW +V+E+ Sbjct: 173 WWSRIIYIWLPASLPGIITGLRLSLSTAWLVIVVAEM 209 >gi|293608377|ref|ZP_06690680.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|299770528|ref|YP_003732554.1| Taurine transport system permease protein tauC [Acinetobacter sp. DR1] gi|292828950|gb|EFF87312.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|298700616|gb|ADI91181.1| Taurine transport system permease protein tauC [Acinetobacter sp. DR1] Length = 289 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 97 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + ++ILP P+ Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQAQVFWHVILPTALPH 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266 Query: 566 VLALNRFL 573 ++ FL Sbjct: 267 AVSFELFL 274 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VA+E++ Sbjct: 180 LSHQLNRERAALSLGASQAQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234 >gi|118588253|ref|ZP_01545662.1| probable amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118438959|gb|EAV45591.1| probable amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 294 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 29/200 (14%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R ++ + + L V + A+S R+ + PILD+MQ++P +L V+ Sbjct: 97 EDTMRTVAMVTVCTLLAIVLGMPIGIVMARSDRVQGFVNPILDLMQTMPSFVYLIPVVMI 156 Query: 123 FMNLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F GKV G I+AI ++ N+ + + D+ E + +F S QK Sbjct: 157 F---GIGKVPGLIAVVIYAIPPMIRLTNLGIRLVDT------DVLEAADAFGSSARQKLM 207 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P ++P G+ +MMS+S M+VV ++I + G+G + +AI Q Sbjct: 208 NVQLPLALPTIMAGINQCIMMSLS----------MVVVA-SMIGVRGLGQEVLVAINNQY 256 Query: 238 LLAILYAMLTMLGVIFLYDQ 257 L A + + L+++ + ++D+ Sbjct: 257 LTAGMLSGLSIVAIAIIFDR 276 >gi|152984113|ref|YP_001351148.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150959271|gb|ABR81296.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 283 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A IS+L LAA+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDNEVMEAVNAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|33591062|gb|AAQ23045.1| NrtB [Cyanothece sp. PCC 8801] Length = 108 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 6/98 (6%) Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D+K VA ++G++++ I+ P PY TG G +W A + +E+ G Sbjct: 3 PKDYKNVAKVLRLSGFKYFWEIMFPAAVPYIFTGLRIGIGPSWLAIVAAEMLVGG----- 57 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I +S PE+++ ++ + L L+R + Sbjct: 58 -VGIGFFIWDSYNSSQLPEIIVALIYVGLVGLILDRLV 94 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IP+D + V++ RLSG++ FW + P ++P + + + + W +VA+EM+V G Sbjct: 1 QIPKDYKNVAKVLRLSGFKYFWEIMFPAAVPYIFTGLRIGIGPSWLAIVAAEMLVGG--- 57 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I + L I+ A++ + V + D+L+ Sbjct: 58 ---VGIGFFIWDSYNSSQLPEIIVALIYVGLVGLILDRLV 94 >gi|15964788|ref|NP_385141.1| putative permease protein [Sinorhizobium meliloti 1021] gi|307309676|ref|ZP_07589328.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti BL225C] gi|307319473|ref|ZP_07598900.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] gi|15073966|emb|CAC45607.1| Probable glycine betaine ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306894845|gb|EFN25604.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] gi|306899888|gb|EFN30511.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti BL225C] Length = 295 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 25/187 (13%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 V+S+ + ++S R ++ P+LD+MQ++P +L V M L GKV G Sbjct: 112 VLSIAIGIPMGIIMSRSDRFQNIVNPVLDVMQTMPSFVYLIPVV---MLLGIGKVPGLIA 168 Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191 I+AI ++ N+ + + +D+ E + +F S WQK + +P ++P G Sbjct: 169 VVIYAIPPMIRLTNLGIRL------VDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAG 222 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + +MM+++ M+V+ ++I + G+G + AI Q ++ L ++G+ Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGI 271 Query: 252 IFLYDQL 258 ++D++ Sbjct: 272 AIIFDRV 278 >gi|227893677|ref|ZP_04011482.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227864537|gb|EEJ71958.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 210 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 5/179 (2%) Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 +IIA +I +PVG +++ + FAQ+L P+ +++ + + P L Sbjct: 31 LIIALVIALPVGYLGSKNRAVAAFCESFAQILRIIPSLALLFILIPFIGT-GIGPALIAL 89 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 +++ ++ N I G + P D +EV S ++ W+ + I LP P+ + G A Sbjct: 90 VVLALPP---LVVNTILGFNEVPTDLEEVGLSLGMSNWQLLKQISLPLALPFILNGIKLA 146 Query: 514 CGGA-WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +AS+ + + + G L TGLG Y + G +L +L M F L + + Sbjct: 147 LVEVIASASLATYIGAGGLGQLIMTGLGLYKMQYVIIGGVSVALLSLLAMFIFDLIIKK 205 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 S+++I+L+ L +K+R + I++ IP L L F ++ F+ G IG Sbjct: 29 SSLIIALVIALPVGYLGSKNRAVAAFCESFAQILRIIPSLALL-FILIPFI----GTGIG 83 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A+ A+ + + + +P DLEEV S +S WQ + +P ++P Sbjct: 84 P---ALIALVVLALPPLVVNTILGFNEVPTDLEEVGLSLGMSNWQLLKQISLPLALP 137 >gi|226952054|ref|ZP_03822518.1| ABC taurine transporter permease subunit [Acinetobacter sp. ATCC 27244] gi|226837211|gb|EEH69594.1| ABC taurine transporter permease subunit [Acinetobacter sp. ATCC 27244] Length = 293 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV++ ++ A I +P+G+W+G + + + P +LL P + PL+V Sbjct: 99 AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + SE+ + G+G + + + VVLG++++ Sbjct: 215 PHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 269 IVAVSFELFL 278 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R+L A+V ++ ++ + VL P++++++ IP L +L V++ Sbjct: 96 QHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIW 155 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + IF S + + S + + + E + S S Q FW+ Sbjct: 156 FG-------IG-ETTKVLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWH 207 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VASE++ Sbjct: 208 VILPTALPHILTGIRIGLGVGWSTLVASELV 238 >gi|226944292|ref|YP_002799365.1| ABC transporter inner membrane permease [Azotobacter vinelandii DJ] gi|226719219|gb|ACO78390.1| ABC transporter, inner membrane permease component [Azotobacter vinelandii DJ] Length = 273 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 22/185 (11%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A +RRL L P+L+ +++P + + T+VYF IG E A I + + + Sbjct: 107 AGARRL---LTPLLNFFRALPPIALIPLTIVYFG-------IG-EAAKILVLVYAAFFTA 155 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 +Y+ + I V+R+ S + F + +P ++P ++ +++ GW +VAS Sbjct: 156 VVVLYEGISRIAPIYVNVARTLGASERELFLRVVLPLALPHVLTATRVALGVGWMTLVAS 215 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML----TMLGVIFLYDQLLFRPMIVW 266 E++ + G+GS I +A L I ++ T + + FL +L R ++ W Sbjct: 216 ELVSAQN------GLGSMIQVAASYFQLEVIYLGLICIGFTAMAMDFLLVRLSAR-LVGW 268 Query: 267 SNKFR 271 + + Sbjct: 269 QERVK 273 >gi|325521537|gb|EGD00340.1| putative binding-protein-dependent transport system protein [Burkholderia sp. TJI49] Length = 238 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 10/146 (6%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGF 115 L YA R L + +MV++++ L ++ R R + + +I +IP L Sbjct: 35 ADDLTYYAGRHMLLVGYSMVLAIVVGVPAGVLLSRPRFQRQAERFMQVFNIGNTIPSLAV 94 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L + F IG ++ AI A+F + + +T + Y+ + N+P L E ++ ++ Sbjct: 95 LAIALGIFG-------IG-DVPAIVALFLASLLPITRNTYEGVKNVPAALREAAKGIGMT 146 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMS 201 GWQ + +P ++P +V + +++ Sbjct: 147 GWQSLLRVELPNALPIIVGGVRTALA 172 >gi|331661741|ref|ZP_08362664.1| taurine transport system permease protein TauC [Escherichia coli TA143] gi|331060163|gb|EGI32127.1| taurine transport system permease protein TauC [Escherichia coli TA143] Length = 275 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 83 SLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|293413621|ref|ZP_06656270.1| taurine transporter subunit [Escherichia coli B185] gi|291433679|gb|EFF06652.1| taurine transporter subunit [Escherichia coli B185] Length = 275 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|289650725|ref|ZP_06482068.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 283 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|152981495|ref|YP_001352171.1| ABC-type nitrate transport system, permease component [Janthinobacterium sp. Marseille] gi|151281572|gb|ABR89982.1| ABC-type nitrate transport system, permease component [Janthinobacterium sp. Marseille] Length = 309 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG +S P LL + P + + + Sbjct: 118 SLKRVGMGFGMAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLP--IGLLVFKA 175 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +P S+ + + W ++ N G P D+ VA ++ W+ I+ P + PY Sbjct: 176 ADPAAIWSIFIC--SIWPMIINTAVGVQRVPQDYMNVAKVLKLSEWKIVTKILFPSVLPY 233 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG A G AW + +E+ + G Sbjct: 234 MLTGVRLAIGTAWLVIVAAEMLTGG 258 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F A+ AAI++IF +W M + + + Sbjct: 152 PIISLLKPVSPLAWLPIGLLVFK--------AADPAAIWSIFICSIWPMIINTAVGVQRV 203 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V++ +LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 204 PQDYMNVAKVLKLSEWKIVTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG 258 >gi|84684440|ref|ZP_01012341.1| putative nitrate transporter [Maritimibacter alkaliphilus HTCC2654] gi|84667419|gb|EAQ13888.1| putative nitrate transporter [Rhodobacterales bacterium HTCC2654] Length = 361 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 16/187 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452 +I S I IP+GI G P ++ I P Q+ + P+V VS L Sbjct: 165 LIGSAIAIPLGIVAGLSPIANAAINPIVQIFKPVSPLAWLPIVTMIVSALAAEGTDGLLP 224 Query: 453 ------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 ++ + + W L N G S+ D V+ + W ++LP P Sbjct: 225 KSFIISAITVTLCSLWPTLINTSLGVSSIDKDLVSVSKVLKMNTWTKITKLVLPSALPLI 284 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 TG + G W I +E+ + + GLG ++ + + GS L +++ F Sbjct: 285 FTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LARIMVAVFT 336 Query: 567 LALNRFL 573 + + FL Sbjct: 337 IGIIGFL 343 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 9/118 (7%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + + +I +DL VS+ +++ W K L +P ++P + + +S+ GW Sbjct: 238 SLWPTLINTSLGVSSIDKDLVSVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWM 297 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + Q L I+ A+ T+ + FL D+++F Sbjct: 298 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMF 349 >gi|188494237|ref|ZP_03001507.1| taurine uptake ABC transporter, permease protein [Escherichia coli 53638] gi|300916138|ref|ZP_07132905.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|188489436|gb|EDU64539.1| taurine uptake ABC transporter, permease protein [Escherichia coli 53638] gi|300416557|gb|EFJ99867.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|332341730|gb|AEE55064.1| taurine transporter protein subunit TauC [Escherichia coli UMNK88] Length = 275 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAARSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 12/148 (8%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +R L +L+A+VI + S + +L PI+++ + +P L +L V++F Sbjct: 85 TRIVLALLAAVVIGIPVGIAMGL----SPTVRGILDPIIELYRPVPPLAYLPLMVIWFG- 139 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 IG E + I I+ + + S + + + +RS S Q W++ + Sbjct: 140 ------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLWFVIL 192 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213 P ++P ++ + + + GW +VA+E+I Sbjct: 193 PGALPEILTGLRIGLGVGWSTLVAAELI 220 >gi|294651139|ref|ZP_06728474.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] gi|292822971|gb|EFF81839.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] Length = 293 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV++ ++ A I +P+G+W+G + + + P +LL P + PL+V Sbjct: 99 AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + SE+ + G+G + + + VVLG++++ Sbjct: 215 PHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 269 IVAVSFELFL 278 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R+L A+V ++ ++ + VL P++++++ IP L +L V++ Sbjct: 96 QHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIW 155 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + IF S + + S + + + E + S S Q FW+ Sbjct: 156 FG-------IG-ETTKVLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWH 207 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VASE++ Sbjct: 208 VILPTALPHILTGIRIGLGVGWSTLVASELV 238 >gi|294085667|ref|YP_003552427.1| ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292665242|gb|ADE40343.1| ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 295 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 5/159 (3%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+ + IA+ + +P+G+++G+ + P +L P + PL + + + P Sbjct: 101 RIAIAFAIATGVGVPLGLFMGWSRKVRDFAFPLLELFRPIPILAWVPLSILLLPGFE-GP 159 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++L+ L + + N + G + +D+ A + W ++ +++PG P+ T Sbjct: 160 VIFLATL---ASLFVTTLNAMLGVDSIDDDYFRAAGCLGSSKWDVFKNVVVPGALPFIFT 216 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 G + G AW + + +E+ S G + L + AY+ T Sbjct: 217 GLQISIGVAWFSLVAAEMVS-GDLGLGYLIVDAYMNNVT 254 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 14/156 (8%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR++ P+L++ + IPIL ++ +++ L PG E IF + ++ T Sbjct: 123 SRKVRDFAFPLLELFRPIPILAWVPLSIL----LLPG----FEGPVIFLATLASLFVTTL 174 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + +I D + S W F + VP ++P + + +S+ WF +VA+EM Sbjct: 175 NAMLGVDSIDDDYFRAAGCLGSSKWDVFKNVVVPGALPFIFTGLQISIGVAWFSLVAAEM 234 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 V GD G+G I A + ++ M+T+ Sbjct: 235 -VSGDL-----GLGYLIVDAYMNNVTVPMVIGMITL 264 >gi|296132038|ref|YP_003639285.1| binding-protein-dependent transport systems inner membrane component [Thermincola sp. JR] gi|296030616|gb|ADG81384.1| binding-protein-dependent transport systems inner membrane component [Thermincola potens JR] Length = 256 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++ +VIS++ T + +TLA R + + + +M +P + L +++F Sbjct: 63 IITGLVISVVLTVILSTLAILFRTVDDFINTAVAVMDPLPGIALLPLAILWFGT------ 116 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + A IF I S +W M + +P +EV + L G + + VP + P Sbjct: 117 --GQKAIIFIIVHSTLWPMILNTVTGFKTVPPIYKEVGENIGLQGPRLVLGIMVPAAFPY 174 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 L+ + + S W ++A+EM+ T G+G YI D+ + A++ ++ + Sbjct: 175 LLTGVKIGWSRAWRALIAAEMVF--GTAGVSGGLGWYIYQQRYLMDISGVFAALVAIVII 232 Query: 252 IFLYDQLLF 260 L + LLF Sbjct: 233 GILVEDLLF 241 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ T W ++ N + G P +KEV + + G R I++P FPY +TG Sbjct: 124 IIVHSTLWPMILNTVTGFKTVPPIYKEVGENIGLQGPRLVLGIMVPAAFPYLLTGVKIGW 183 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 AW A I +E+ +G + + GLG YI + Sbjct: 184 SRAWRALIAAEMV-FGTAGV-SGGLGWYIYQQ 213 >gi|257483860|ref|ZP_05637901.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330891839|gb|EGH24500.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. mori str. 301020] gi|330987240|gb|EGH85343.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 283 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|260550615|ref|ZP_05824824.1| taurine transporter [Acinetobacter sp. RUH2624] gi|260406326|gb|EEW99809.1| taurine transporter [Acinetobacter sp. RUH2624] Length = 289 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 97 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + ++ILP P+ Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266 Query: 566 VLALNRFL 573 ++ FL Sbjct: 267 AVSFELFL 274 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VA+E++ Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234 >gi|91209432|ref|YP_539418.1| taurine transporter subunit [Escherichia coli UTI89] gi|117622634|ref|YP_851547.1| taurine transporter subunit [Escherichia coli APEC O1] gi|218557280|ref|YP_002390193.1| taurine transporter subunit [Escherichia coli S88] gi|237707643|ref|ZP_04538124.1| taurine transporter subunit [Escherichia sp. 3_2_53FAA] gi|91071006|gb|ABE05887.1| taurine transport system permease protein TauC [Escherichia coli UTI89] gi|115511758|gb|ABI99832.1| taurine transport system permease protein TauC [Escherichia coli APEC O1] gi|218364049|emb|CAR01714.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|226898853|gb|EEH85112.1| taurine transporter subunit [Escherichia sp. 3_2_53FAA] gi|294490726|gb|ADE89482.1| taurine uptake ABC transporter, permease protein [Escherichia coli IHE3034] gi|307628162|gb|ADN72466.1| taurine transporter subunit [Escherichia coli UM146] gi|315289831|gb|EFU49221.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315299597|gb|EFU58845.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|323953018|gb|EGB48886.1| inner membrane transport system [Escherichia coli H252] gi|323958561|gb|EGB54264.1| inner membrane transport system [Escherichia coli H263] Length = 275 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|238063035|ref|ZP_04607744.1| ABC nitrate transporter permease component [Micromonospora sp. ATCC 39149] gi|237884846|gb|EEP73674.1| ABC nitrate transporter permease component [Micromonospora sp. ATCC 39149] Length = 264 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 17/123 (13%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 +AI IF + +W + IPRD V+ F+ W++ +P ++P ++ + Sbjct: 134 SAIIVIFITALWPTLINTAAGAGAIPRDQRNVALVFKFRPLAYLWHVLIPNALPSIITGL 193 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIG-----SYIALAIKEQDLLAILYAMLTMLGV 251 +SM GW +VA EM+ G++ GIG SY AL + + + A + ++GV Sbjct: 194 RLSMGIGWMVIVAVEML-QGNS-----GIGYFVWNSYNALELDK------VVAAIVLIGV 241 Query: 252 IFL 254 I L Sbjct: 242 IGL 244 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 12/190 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV + +A+++ I +G+ +G + S + P Q+L +FP + Y Sbjct: 72 ISLRRVFLGFGLAALVGITLGLIMGAVRPVWSALNPLVQVLRPVSPLAWFP-----IWLY 126 Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++++IF T W L N AGA A P D + VA F + ++++P Sbjct: 127 IIEEPAQSAIIVIFITALWPTLINTAAGAGAIPRDQRNVALVFKFRPLAYLWHVLIPNAL 186 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG + G W + E+ +G+G ++ S +VV ++++ Sbjct: 187 PSIITGLRLSMGIGWMVIVAVEMLQ------GNSGIGYFVWNSYNALELDKVVAAIVLIG 240 Query: 564 CFVLALNRFL 573 L L+ L Sbjct: 241 VIGLVLDAIL 250 >gi|28872384|ref|NP_795003.1| histidine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213971438|ref|ZP_03399551.1| histidine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382155|ref|ZP_07230573.1| histidine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato Max13] gi|302060092|ref|ZP_07251633.1| histidine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato K40] gi|302132378|ref|ZP_07258368.1| histidine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855639|gb|AAO58698.1| histidine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213923799|gb|EEB57381.1| histidine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|330874123|gb|EGH08272.1| histidine ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965521|gb|EGH65781.1| histidine ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017887|gb|EGH97943.1| histidine ABC transporter, permease protein, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 283 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|26986974|ref|NP_742399.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida KT2440] gi|24981588|gb|AAN65863.1|AE016214_8 taurine ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 279 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 87 SLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L IF I G A S T + R++ILP P Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGATKAQLIRHVILPSALPD 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256 Query: 566 VLALNRFL 573 AL L Sbjct: 257 AFALEMSL 264 >gi|239503534|ref|ZP_04662844.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB900] Length = 289 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 97 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + ++ILP P+ Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266 Query: 566 VLALNRFL 573 ++ FL Sbjct: 267 AVSFELFL 274 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VA+E++ Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234 >gi|163734362|ref|ZP_02141802.1| nitrate ABC transporter, permease component [Roseobacter litoralis Och 149] gi|161392370|gb|EDQ16699.1| nitrate ABC transporter, permease component [Roseobacter litoralis Och 149] Length = 357 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 15/186 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-- 452 +IASI+ IP+GI G ++ + P Q+ + P+V VS + + W Sbjct: 162 MIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTNDGWFEK 221 Query: 453 -----SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 ++ + + W L N G S+ D V+ + + ++LP P Sbjct: 222 SFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + G W I +E+ + + GLG ++ + + GS L +++ F + Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQS--LARIMVAVFTI 333 Query: 568 ALNRFL 573 + FL Sbjct: 334 GIIGFL 339 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 11/129 (8%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + + +I +DL VSR +++ + K L +P ++P + + +S+ GW Sbjct: 234 SLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260 ++A+EM+ PG+G ++ + Q L I+ A+ T+ + FL D++++ Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYAL 347 Query: 261 RPMIVWSNK 269 + M +SN Sbjct: 348 QSMFTFSNN 356 >gi|157371969|ref|YP_001479958.1| glycine betaine transporter membrane protein [Serratia proteamaculans 568] gi|157323733|gb|ABV42830.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] Length = 374 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+ G V+ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 189 ARSKHAGKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 243 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 244 TI---LGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 296 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 297 VVIASMIAVG-------GLGQMVLRGIGRLDM 321 >gi|332529142|ref|ZP_08405106.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] gi|332041365|gb|EGI77727.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] Length = 298 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/172 (20%), Positives = 75/172 (43%), Gaps = 9/172 (5%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P DI + + L + + ++ R+ + I + V T+ SRR +L P Sbjct: 77 APSDIARTL-LAFGAQGLTTHVAASSARVFAGFAIGAVLAIVIGTVVGLSRRGEALLDPT 135 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +++IP L ++ +++ KV+ + F ++ + ++ R Sbjct: 136 FQALRAIPSLAWVPLLLLWLGIDEASKVVLIAIGGFFPVY--------MGVASGFRDVDR 187 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 L EV+R +RL + + +P ++P ++ + +S W F+VA+E+I Sbjct: 188 KLVEVARMYRLGPVELARRVLLPAALPAVLTGLRNGLSLAWMFMVAAELIAA 239 >gi|86749954|ref|YP_486450.1| binding-protein dependent transport system inner membrane protein [Rhodopseudomonas palustris HaA2] gi|86572982|gb|ABD07539.1| Binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris HaA2] Length = 266 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A+++ IP+G+ IG P + + + P LL P + PL + ++ L P + L Sbjct: 83 LAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWLPL---SMIFFGLGPKSAV-FL 138 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + IL N I G + E A G + +R ++LP P G Sbjct: 139 VFLGAFYPILLNTIFGVKSVDARLFEAAGMLGCRGPQLFRAVVLPAALPSIFNGLRLGAS 198 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 AW +V E+ GLGA I + Sbjct: 199 FAWILIVVGEMTG------VPEGLGAVIMDG 223 >gi|331012049|gb|EGH92105.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 283 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|317494363|ref|ZP_07952777.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917613|gb|EFV38958.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 282 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+++ ++ A +I +PVGI +G P + + P ++ P + PL++ Sbjct: 90 SLSRILIALLAAVVIGVPVGIAMGLNPTVRGILDPIIEIYRPVPPLAYLPLMIIWFGIGE 149 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + AG + A + + W+ Y++LP P Sbjct: 150 TS-KILLIYLAIFAP---VTLAAAAGVRSVEQVRVRAAQALGASRWQVLWYVVLPNALPE 205 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T GLG I + E + V+ G+ ++ Sbjct: 206 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMIQSAGEFLATDVVIAGISVIAFI 259 Query: 566 VLALN 570 AL Sbjct: 260 AFALE 264 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L PI++I + +P L +L +++F IG E + I I+ + +T + + Sbjct: 121 ILDPIIEIYRPVPPLAYLPLMIIWFG-------IG-ETSKILLIYLAIFAPVTLAAAAGV 172 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +++ S WQ WY+ +P ++P ++ + + + GW +VA+E+I Sbjct: 173 RSVEQVRVRAAQALGASRWQVLWYVVLPNALPEILTGLRIGLGVGWSTLVAAELI 227 >gi|206974538|ref|ZP_03235454.1| taurine ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217960446|ref|YP_002339008.1| taurine ABC transporter, permease protein [Bacillus cereus AH187] gi|222096497|ref|YP_002530554.1| alkanesulfonates transport system permease; sulfonate ABC transporter , permease [Bacillus cereus Q1] gi|229139641|ref|ZP_04268211.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26] gi|206747181|gb|EDZ58572.1| taurine ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217063782|gb|ACJ78032.1| taurine ABC transporter, permease protein [Bacillus cereus AH187] gi|221240555|gb|ACM13265.1| alkanesulfonates transport system permease; sulfonate ABC transporter, permease [Bacillus cereus Q1] gi|228643772|gb|EEL00034.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26] Length = 274 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 5/149 (3%) Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 I++G ++ RV+ I+ +++ IPVG+ IG P + + P + P F L Sbjct: 76 IYIG-VSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITL--- 131 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + ++ + + L+M + T + + N I G A D A S + W+ ++I+ Sbjct: 132 FMLWFGIGEQSKIFLIM-YATFFIVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVII 190 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVAS 528 P PY TGA A G ++ A + +E+ + Sbjct: 191 PAALPYIYTGAKLAMGSSFMAIVGAEMVA 219 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 8/160 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Y + LR+++ ++ L L + L + P+++ ++ IP L F+T Sbjct: 73 SLFIYIGVSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLF 132 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F IG E + IF I + + +T + + + D +RS S WQ Sbjct: 133 MLWFG-------IG-EQSKIFLIMYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQI 184 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +++ +P ++P + ++M + +V +EM+ + + Sbjct: 185 MFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVAANEGI 224 >gi|294665704|ref|ZP_06730979.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604546|gb|EFF47922.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 283 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 28/208 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ I + + + VG+ +G + + P Q L A P+ + PL++ Sbjct: 79 SVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLL------- 131 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW+ + L+ G + + V++G E+ S+ ++ R R I+ Sbjct: 132 ----LWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRIL 187 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG T+ AW + +E+ + T GLG +++ E S P++V+G Sbjct: 188 LPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRET-SRPDIVIG 240 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586 +++ + L+ L + +R LR Sbjct: 241 AIVLLALLGKLSDGLLKSIE---SRTLR 265 >gi|283833775|ref|ZP_06353516.1| aliphatic sulfonates ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070436|gb|EFE08545.1| aliphatic sulfonates ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 263 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 102/220 (46%), Gaps = 23/220 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I ++ SR +L + +++++P L + +++ Sbjct: 60 QHLAISSWRALVGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + + + NI R L E++RS+ LSG+ F + Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDRGLVEMARSYGLSGFSLFIH 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VILPGALPSIMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 ILYA+L L + QLL R + W+ + ++ T Sbjct: 225 VVAIILYALLGKLADV--SAQLLERVWLRWNPAYHVKEAT 262 >gi|237802267|ref|ZP_04590728.1| histidine ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025124|gb|EGI05180.1| histidine ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 283 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|171320773|ref|ZP_02909781.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] gi|171093965|gb|EDT39078.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] Length = 295 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + ++F FV +LA +R VL + + +P + L +++F L G + Sbjct: 102 LLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWF-GLGTGSL 160 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + F + + +W + SMY +P L+ R++ L+G ++ + VP ++P Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPS 213 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235 >gi|330961928|gb|EGH62188.1| histidine ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 283 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|298489261|ref|ZP_07007278.1| L-proline/glycine/betaine ABC transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156225|gb|EFH97328.1| L-proline/glycine/betaine ABC transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 283 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|187924081|ref|YP_001895723.1| binding-protein-dependent transporters inner membrane component [Burkholderia phytofirmans PsJN] gi|187715275|gb|ACD16499.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 286 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 35/68 (51%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T S Q P L EV+R F SGWQ+ YL +P ++P L + ++ + W +V Sbjct: 166 VTLSTLQGFRQTPAALNEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVV 225 Query: 210 SEMIVVGD 217 E++ + Sbjct: 226 VELVASSE 233 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + + + G P EVA F +GW+ Y++LP P TG A AW A +V Sbjct: 166 VTLSTLQGFRQTPAALNEVARVFEYSGWQRIVYLVLPAAVPTLATGVRLAFTKAWLALVV 225 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 E+ + + GLG I + V+ V+++ A+NR L Sbjct: 226 VELVA------SSEGLGYLIVYGRQLFQLDLVMASVVVVGAIGYAVNRAL 269 >gi|331019006|gb|EGH99062.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 284 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 7/124 (5%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 +AIF IF VW M + + + ++ V+R +S +K + + +P + P ++ M Sbjct: 157 SAIFVIFICSVWPMLINTAFGVAGVRKEWLNVARVLEVSPLRKAFLVILPAAAPTIITGM 216 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +SM W +VA+EM++ G GIG ++ L +++A+L M+GVI + Sbjct: 217 RISMGIAWLVIVAAEMLIGGT------GIGYFVWNQWNNLSLGNVIFAVL-MIGVIGMLL 269 Query: 257 QLLF 260 L+F Sbjct: 270 DLMF 273 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A+++ IP+G IG P + + PF Q+L PL ++ Y Sbjct: 96 SLGRVGAGYFLAALVAIPLGFLIGMSPLLYRALDPFIQVLKPIS-----PLAWMPIALYT 150 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++ +IF + W +L N G + ++ VA ++ R +ILP P Sbjct: 151 IKDSTTSAIFVIFICSVWPMLINTAFGVAGVRKEWLNVARVLEVSPLRKAFLVILPAAAP 210 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S V+ VL++ Sbjct: 211 TIITGMRISMGIAWLVIVAAEMLIGG------TGIGYFVWNQWNNLSLGNVIFAVLMIGV 264 Query: 565 FVLALN 570 + L+ Sbjct: 265 IGMLLD 270 >gi|264676723|ref|YP_003276629.1| nitrate ABC transporter inner membrane subunit [Comamonas testosteroni CNB-2] gi|262207235|gb|ACY31333.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni CNB-2] Length = 330 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG +S P LL + P + + + Sbjct: 139 SLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 196 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP ++ IF + W ++ N G P D+ VA +++ W+ I+ P + P Sbjct: 197 ANP---AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLP 253 Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530 Y +TG A G AW + +E+ + G Sbjct: 254 YMLTGVRLAVGTAWLVIVAAEMLTGG 279 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 173 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 224 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 225 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 279 >gi|229197192|ref|ZP_04323926.1| ABC transporter, permease protein [Bacillus cereus m1293] gi|228586305|gb|EEK44389.1| ABC transporter, permease protein [Bacillus cereus m1293] Length = 272 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 4/144 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ I+ +++ IPVG+ IG P + + P + P F L + ++ Sbjct: 78 VSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITL---FMLWF 134 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + L+M + T + + N I G A D A S + W+ ++I+P P Sbjct: 135 GIGEQSKIFLIM-YATFFIVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVIIPAALP 193 Query: 505 YYVTGAITACGGAWNASIVSEVAS 528 Y TGA A G ++ A + +E+ + Sbjct: 194 YIYTGAKLAMGSSFMAIVGAEMVA 217 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 8/160 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Y + LR+++ ++ L L + L + P+++ ++ IP L F+T Sbjct: 71 SLFIYIGVSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLF 130 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F IG E + IF I + + +T + + + D +RS S WQ Sbjct: 131 MLWFG-------IG-EQSKIFLIMYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQI 182 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +++ +P ++P + ++M + +V +EM+ + + Sbjct: 183 MFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVAANEGI 222 >gi|330901731|gb|EGH33150.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 232 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 43 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 99 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 100 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 154 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 155 LAMPSIMAGINQTTMMALS----MVVIASMI 181 >gi|319794068|ref|YP_004155708.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315596531|gb|ADU37597.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 389 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+++V ++ L A S R V+ P+LD MQ+ P +L V+ F G V Sbjct: 170 LTSLVFCMVIGLPLGVLLASSDRAQRVMRPVLDAMQTTPAFVYLVPVVMLF---GIGNVP 226 Query: 133 GAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 G + IFA+ ++ N+ L + DL E +R++ S WQ + +P +MP Sbjct: 227 GVIVTIIFALAPLVRLTNL------GLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPS 280 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 281 IMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 320 >gi|297171174|gb|ADI22183.1| ABC-type proline/glycine betaine transport system, permease component [uncultured gamma proteobacterium HF0200_34B07] gi|297171298|gb|ADI22304.1| ABC-type proline/glycine betaine transport system, permease component [uncultured actinobacterium HF0200_46I24] Length = 681 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 9/129 (6%) Query: 66 SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TL M L ++ +++ F A A KSRR+ ++ P LD+MQ++P +L ++ F Sbjct: 116 SMNTLGMVLVSIPLAIGVGFGMAVAAYKSRRINAIIQPTLDLMQTVPTFAYLIPILLLFG 175 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V+G +AI+A M +M L +P ++ E + Q+FW++ Sbjct: 176 F---GPVVGVVASAIYACPP-----MARNMILGLQKVPPEVLEAGLMSGSTRRQQFWWVR 227 Query: 185 VPFSMPGLV 193 VP ++P ++ Sbjct: 228 VPSALPNIM 236 >gi|170700313|ref|ZP_02891326.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] gi|170134800|gb|EDT03115.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] Length = 295 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + ++F FV +LA +R VL + + +P + L +++F L G + Sbjct: 102 LLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWF-GLGTGSL 160 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + F + + +W + SMY +P L+ R++ L+G ++ + VP ++P Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPS 213 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235 >gi|313496595|gb|ADR57961.1| TauC [Pseudomonas putida BIRD-1] Length = 279 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 87 SLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L IF I G A S T + R++ILP P Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGATKAQLIRHVILPSALPD 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256 Query: 566 VLALNRFL 573 AL L Sbjct: 257 AFALEMSL 264 >gi|299529543|ref|ZP_07042980.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni S44] gi|298722406|gb|EFI63326.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni S44] Length = 330 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG +S P LL + P + + + Sbjct: 139 SLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 196 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP ++ IF + W ++ N G P D+ VA +++ W+ I+ P + P Sbjct: 197 ANP---AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLP 253 Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530 Y +TG A G AW + +E+ + G Sbjct: 254 YMLTGVRLAVGTAWLVIVAAEMLTGG 279 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 173 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 224 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 225 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 279 >gi|160895595|ref|YP_001561177.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] gi|160361179|gb|ABX32792.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] Length = 296 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 21/203 (10%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ I+AS++ +P+GI +G + + +PF PA+ F PL++ Sbjct: 105 MTVWRVMGGFILASVVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVG 164 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+IF G+ + I V D E A + + R +++PG Sbjct: 165 ETQ-----KLLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGVVRRVLIPGAA 219 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 220 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 273 Query: 564 CFVL-------ALNR--FLWHPL 577 L +LNR F W L Sbjct: 274 LIGLVSDFIFKSLNRRMFEWSTL 296 >gi|297618911|ref|YP_003707016.1| binding-protein-dependent transport systems inner membrane component [Methanococcus voltae A3] gi|297377888|gb|ADI36043.1| binding-protein-dependent transport systems inner membrane component [Methanococcus voltae A3] Length = 253 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+ ++A + +P+GI +G+ ++ F +LL P + PL ++ Sbjct: 59 ISITRVLTGFLVAFAVAVPLGIMMGYYKPVNDIFDTFMELLRPIPPLAWVPLTLAWFGVG 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++ G + IL N +AG PN E + + TG R +I+P P Sbjct: 119 STS----IIFIIFIGAFFPILINTVAGVKEVPNILVEASKTLGCTGINVLRKVIIPAASP 174 Query: 505 YYVTGAITACGGAWNASIVSE 525 +TG G AW + +E Sbjct: 175 SILTGLRVGAGIAWMCVVAAE 195 >gi|66048054|ref|YP_237895.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|289672073|ref|ZP_06492963.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae FF5] gi|302188564|ref|ZP_07265237.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae 642] gi|63258761|gb|AAY39857.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas syringae pv. syringae B728a] gi|330940565|gb|EGH43627.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. pisi str. 1704B] gi|330954740|gb|EGH55000.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae Cit 7] gi|330972984|gb|EGH73050.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aceris str. M302273PT] gi|330982273|gb|EGH80376.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 283 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|330875029|gb|EGH09178.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 282 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+ S +I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVFSGFLIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ KV+ + A F ++ + V ++ I R + Sbjct: 122 GLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV--------AAIRGIDRKM 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 EV + + S ++ + +P ++PGL + MS W F+VA+E+I G+ Sbjct: 174 VEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLAWMFLVAAELIAA------TKGL 227 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270 G ++ + +L A++ + + L D LL R + W + F Sbjct: 228 GYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLERRFLAWRDTF 275 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 25/186 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +I + + + W+G + ++P L + P+ + PL++ Sbjct: 84 SLLRVFSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLL------- 136 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + N +A EV + + +R R I+ Sbjct: 137 ----LWLGIGETSKVVLIAIGAFFPVYLNGVAAIRGIDRKMVEVGQMYGFSRYRLTRRIL 192 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + AW + +E+ + T GLG +++ E S P++VL Sbjct: 193 LPAALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 245 Query: 559 VLIMCC 564 +I+ Sbjct: 246 AIIVLA 251 >gi|294146862|ref|YP_003559528.1| ABC-type transport system permease component [Sphingobium japonicum UT26S] gi|292677279|dbj|BAI98796.1| ABC-type transport system permease component [Sphingobium japonicum UT26S] Length = 272 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 69/143 (48%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + ++I + + +A SR + + P++ I ++IP L +V+F K Sbjct: 81 RVAAGLLIGVSLGLILGLVAGLSRAGELAVDPLMQIKRTIPALALTPLFIVWFGIGETPK 140 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V +F ++ ++Y + ++ L + ++SF LS W++ W++ +P ++P Sbjct: 141 VALIAFGTVFPVY--------LNLYSGIRSVDLRLLDAAKSFGLSRWEQIWHVVLPSALP 192 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 L+ + ++S +V +E I Sbjct: 193 SLLVGLRYALSVAILVLVVAEQI 215 >gi|227824437|ref|ZP_03989269.1| ABC glycine betaine/L-proline transporter [Acidaminococcus sp. D21] gi|226904936|gb|EEH90854.1| ABC glycine betaine/L-proline transporter [Acidaminococcus sp. D21] Length = 286 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 23/200 (11%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T +L+A+ SLL L A +R ++ P LD MQ++P ++ V Sbjct: 95 QMMCETLSIVLAAVFFSLLIGLPIGVLLASIKRADPLIRPFLDAMQTMPTFVYMIPAV-- 152 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 M L PGKV ++A+ V +T + + ++ E SRSF S +Q Sbjct: 153 -MLLGPGKVPAVLATVVYAVVP--VIRLT---SHGIKQVDPEVVEASRSFGASRFQTLVK 206 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++P G+ MMM+++ +VV ++I G+G + +AI + Sbjct: 207 VQIPQALPTIMTGINQTMMMAVA-----------MVVTSSMIGANGLGMEVLIAINRMES 255 Query: 239 LAILYAMLTMLGVIFLYDQL 258 L A L+++ + L D+L Sbjct: 256 GRGLSAGLSIVIIAILLDRL 275 >gi|169796267|ref|YP_001714060.1| taurine ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|213156998|ref|YP_002319043.1| taurine transport system permease protein [Acinetobacter baumannii AB0057] gi|215483722|ref|YP_002325945.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB307-0294] gi|301345497|ref|ZP_07226238.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB056] gi|301594987|ref|ZP_07239995.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB059] gi|332855398|ref|ZP_08435854.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332867256|ref|ZP_08437506.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] gi|169149194|emb|CAM87074.1| Taurine transport protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|213056158|gb|ACJ41060.1| taurine transport system permease protein [Acinetobacter baumannii AB0057] gi|213985797|gb|ACJ56096.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB307-0294] gi|332727488|gb|EGJ58915.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332734089|gb|EGJ65222.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] Length = 289 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 97 SISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 LL+ F ++ + G + + + A S + + + ++ILP P+ Sbjct: 157 TTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTALPH 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 213 IITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIAIV 266 Query: 566 VLALNRFL 573 ++ FL Sbjct: 267 AVSFELFL 274 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++++++ IP L +L V++F IG E + IF S + + S + Sbjct: 128 VLDPLVELLRPIPPLAYLPLLVIWFG-------IG-ETTKVLLIFFSILAPVIISSAHGV 179 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + E + S S Q FW++ +P ++P ++ + + + GW +VA+E++ Sbjct: 180 LSHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELV 234 >gi|301025486|ref|ZP_07189033.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300396001|gb|EFJ79539.1| ABC transporter, permease protein [Escherichia coli MS 69-1] Length = 275 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|289624880|ref|ZP_06457834.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869209|gb|EGH03918.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 283 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +I++L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATIIAVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 +MP G+ MM++S VV + MI Sbjct: 206 LAMPSIMAGINQTTMMALS----MVVIASMI 232 >gi|34557298|ref|NP_907113.1| hypothetical protein WS0908 [Wolinella succinogenes DSM 1740] gi|34483014|emb|CAE10013.1| ABCB PROTEIN [Wolinella succinogenes] Length = 260 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/219 (21%), Positives = 99/219 (45%), Gaps = 14/219 (6%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P + + + + L + ++ S T R L ++ISL + LA + ++ PI+ Sbjct: 47 PLETFEKLTLLLGDPRIQEHLSLTLHRALKGLLISLALGSLLGFLAGLFKTASLLARPIV 106 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 I+ IP + ++ +++F L G V+ + A F I + + I + Sbjct: 107 TILVGIPPIAWIVLAMIWF-GLGEGTVLFTIIIASFPI-------VFVGALEGSRAIEGE 158 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 +E+ +F LS QK ++L +P L + + ++ W V+ +E++ D G Sbjct: 159 SQEMCDAFSLSWIQKLFHLYIPHLFSYLFPSYIAALGMSWKIVIMAELLSSSD------G 212 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 IG+ +A+A + + L + M+G + + + L+ P+ Sbjct: 213 IGAELAIARSHLETITALALVCMMVGTLLIIEYLILEPI 251 >gi|319780587|ref|YP_004140063.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166475|gb|ADV10013.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 286 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV ++ A ++ +PVG+ IG P + L P + PLVV Sbjct: 95 SLGRVFAALVAAILVGVPVGLAIGISTIGRGIFDPLLEFLRPIPPLAYLPLVVIWFGIGE 154 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L +++ M+ + + +G + A S T + R++ILP P Sbjct: 155 PSKILVITISMLA----PVALSTASGVRGVSQERINAARSLGATQRQVVRHVILPSALPA 210 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G W+ + +E+ + T GLG I + + VV+G+L++ Sbjct: 211 ILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVVMGILVIAAI 264 Query: 566 VLALN 570 L Sbjct: 265 AFVLE 269 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+L+ ++ IP L +L V++F P K I I S + + S + + Sbjct: 129 PLLEFLRPIPPLAYLPLVVIWFGIGEPSK--------ILVITISMLAPVALSTASGVRGV 180 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ +RS + Q ++ +P ++P ++ + +++ GW +VA+E++ Sbjct: 181 SQERINAARSLGATQRQVVRHVILPSALPAILTGLRIALGAGWSTLVAAELV 232 >gi|313650823|gb|EFS15224.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri 2a str. 2457T] Length = 217 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 55 IQMLRNVPHLALIPLVILWFAIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 106 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 107 GLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWL------TLIVAETISANS 160 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 161 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 216 >gi|119476871|ref|ZP_01617152.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [marine gamma proteobacterium HTCC2143] gi|119449678|gb|EAW30915.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [marine gamma proteobacterium HTCC2143] Length = 337 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTT-LRMLSAMVISLLFTFVYATLAAK------ 92 QE + + D T+ + S Y + T L + ++++ F F+ ATL A Sbjct: 96 QEVRNAKKLADDPSATVKIRS---YTGKATFLDQIFTSLLTVAFGFMVATLVAVPLGILC 152 Query: 93 --SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK---VIGAELAAIFAIFTSQV 147 S L + PI+ + + L +L + LY A L + F + + Sbjct: 153 GLSESLYRCINPIIQTFKPVSPLAWLPLVTMVVSALYVSDDPLFDKAFLTSAFTVALCCL 212 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + + +I RDL VSR RL + +P ++P + + +S++ GW + Sbjct: 213 WPTVVNTIVGVASIDRDLINVSRVLRLGSLVHIRKVVIPSAIPLIFTGLRLSLATGWMVL 272 Query: 208 VASEMIVVGDTVIPLPGIGSYI 229 +A+EM+ PG+G +I Sbjct: 273 IAAEMLAQN------PGLGKFI 288 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 40/192 (20%), Positives = 77/192 (40%), Gaps = 15/192 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449 ++A+++ +P+GI G + I P Q + PLV VS +++ + Sbjct: 139 MVATLVAVPLGILCGLSESLYRCINPIIQTFKPVSPLAWLPLVTMVVSALYVSDDPLFDK 198 Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 L + + W + N I G ++ D V+ + R +++P P Sbjct: 199 AFLTSAFTVALCCLWPTVVNTIVGVASIDRDLINVSRVLRLGSLVHIRKVVIPSAIPLIF 258 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG + W I +E+ + + GLG +I + + GS LG +++ V+ Sbjct: 259 TGLRLSLATGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSNS--LGRIMVAVLVI 310 Query: 568 ALNRFLWHPLYL 579 + F+ L L Sbjct: 311 GIIGFILDSLML 322 >gi|307947483|ref|ZP_07662816.1| choline ABC transporter, permease protein [Roseibium sp. TrichSKD4] gi|307769301|gb|EFO28529.1| choline ABC transporter, permease protein [Roseibium sp. TrichSKD4] Length = 282 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + T ++ A V+ + AA +L VL PILD+MQ+IP +L ++ Sbjct: 91 EETTETLALVIGASVVCMAVGVPIGVAAAHRPKLFSVLRPILDLMQTIPTFVYLIPALIL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A I +Q+ + + P+ L E +F + Q W Sbjct: 151 FGLGMVPGLIATVIFAIPAPIRLTQL---------GVSSTPKQLLEAGEAFGATKSQLLW 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 202 KIELPYALPQIMAGLTQTIMLSLS 225 >gi|172065522|ref|YP_001816234.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gi|171997764|gb|ACB68681.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 295 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + ++F FV +LA +R VL + + +P + L +++F L G + Sbjct: 102 LLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWF-GLGTGSL 160 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + F + + +W + SMY +P L+ R++ L+G ++ + VP ++P Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPS 213 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235 >gi|294626068|ref|ZP_06704676.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599604|gb|EFF43733.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 283 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 28/208 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ I + + + VG+ +G + + P Q L A P+ + PL++ Sbjct: 79 SVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLL------- 131 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW+ + L+ G + + V++G E+ S+ ++ R R I+ Sbjct: 132 ----LWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRIL 187 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG T+ AW + +E+ + T GLG +++ E S P++V+G Sbjct: 188 LPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRET-SRPDIVIG 240 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586 +++ + L+ L + +R LR Sbjct: 241 AIVLLALLGKLSDGLLKSIE---SRTLR 265 >gi|293418437|ref|ZP_06660872.1| taurine transporter subunit [Escherichia coli B088] gi|300903373|ref|ZP_07121301.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|301301510|ref|ZP_07207645.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|291324965|gb|EFE64380.1| taurine transporter subunit [Escherichia coli B088] gi|300404668|gb|EFJ88206.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300843007|gb|EFK70767.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|315256185|gb|EFU36153.1| ABC transporter, permease protein [Escherichia coli MS 85-1] Length = 275 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|170724138|ref|YP_001751826.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] gi|169762141|gb|ACA75457.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] Length = 279 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 87 SLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L IF I G A S T + R++ILP P Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDPARLRAAQSLGATKVQLIRHVILPSALPD 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256 Query: 566 VLALN 570 AL Sbjct: 257 AFALE 261 >gi|312198035|ref|YP_004018096.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EuI1c] gi|311229371|gb|ADP82226.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EuI1c] Length = 301 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+A + R+L+ ++ + A R + +L PI++I + +P L F+ +V+ Sbjct: 107 QHALVSAARILAGWAAGVVLGVAMGGVMASVRVIRHLLDPIIEITRPLPPLAFIPLFIVW 166 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E I V M + +L +P++L + SRS S Sbjct: 167 FG-------IG-ETPKFILILIGVVPVMIIATVSALDAVPKELVQASRSLGASPLWALLT 218 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + ++P ++ M ++M G W +VA E+I Sbjct: 219 VRLRSALPAIITGMRLAMGGAWTSIVAVELI 249 >gi|225867769|ref|YP_002743717.1| glycine-betaine binding permease [Streptococcus equi subsp. zooepidemicus] gi|225701045|emb|CAW97837.1| putative glycine-betaine binding permease protein [Streptococcus equi subsp. zooepidemicus] Length = 576 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 33/175 (18%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A +IS+L AK++ + V+ P+LD+MQ++P +L V +F G V Sbjct: 102 LVASLISVLLGIPLGIWMAKNKTVHQVINPMLDLMQTMPAFVYLIPAVAFF---GIGMVP 158 Query: 133 GAELAAIFAI-----FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G + IFA+ FTS ++ IP +L E S +F + QK + +P Sbjct: 159 GVFASVIFALPPTVRFTS----------LAIRQIPTELIEASDAFGSTPKQKLLKVELPL 208 Query: 188 S----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 209 AKHTMMAGVNQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|49083280|gb|AAT50991.1| PA5095 [synthetic construct] Length = 284 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A IS+L LAA+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|76789600|ref|YP_328686.1| ABC transporter permease protein [Chlamydia trachomatis A/HAR-13] gi|237805208|ref|YP_002889362.1| ABC transporter permease [Chlamydia trachomatis B/TZ1A828/OT] gi|76168130|gb|AAX51138.1| ABC transporter permease protein [Chlamydia trachomatis A/HAR-13] gi|231273508|emb|CAX10424.1| ABC transporter permease [Chlamydia trachomatis B/TZ1A828/OT] Length = 589 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + +++Q + N P +L E ++ + WQK + L +P +P + + ++MS F +A Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267 E + G+G I + + D+ L + LTML + Y LL + Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243 Query: 268 NKFRLERTTGIYPADSWVLYL 288 FR+E+T+ WV L Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262 >gi|77459517|ref|YP_349024.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77383520|gb|ABA75033.1| putative integral membrane transport protein [Pseudomonas fluorescens Pf0-1] Length = 279 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ + +R+L I V+A SR L P ++SIP L ++ +++ Sbjct: 76 KHIGASLIRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAALRSIPSLAWVPLLLLW 135 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 K++ + A F ++ + V ++ NI R L EV + S Q Sbjct: 136 LGIDETSKIVLIAIGAFFPVYVNVV--------AAIRNIDRKLVEVGHIYGFSPLQLVRR 187 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++PGL + MS W F+VA+E+I G+G Y+ +E I+ Sbjct: 188 ILLPAALPGLFTGLRSGMSLSWMFLVAAELIAATK------GLG-YLLSDGRETSRPDIV 240 Query: 243 YAMLTMLGVI-FLYDQLLF---RPMIVWSNKF 270 A + +L ++ L D LL R +VW + F Sbjct: 241 LAAIIVLALLGKLSDGLLAILERRWLVWRDAF 272 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 25/192 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ I + + + W+G + ++P L + P+ + PL++ Sbjct: 81 SLIRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAALRSIPSLAWVPLLL------- 133 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + NV+A EV + + + R I+ Sbjct: 134 ----LWLGIDETSKIVLIAIGAFFPVYVNVVAAIRNIDRKLVEVGHIYGFSPLQLVRRIL 189 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + +W + +E+ + T GLG +++ E S P++VL Sbjct: 190 LPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRET-SRPDIVLA 242 Query: 559 VLIMCCFVLALN 570 +I+ + L+ Sbjct: 243 AIIVLALLGKLS 254 >gi|107104191|ref|ZP_01368109.1| hypothetical protein PaerPA_01005264 [Pseudomonas aeruginosa PACS2] gi|116053242|ref|YP_793565.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218894194|ref|YP_002443063.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238198|ref|ZP_04931521.1| hypothetical protein PACG_04324 [Pseudomonas aeruginosa C3719] gi|254244024|ref|ZP_04937346.1| hypothetical protein PA2G_04857 [Pseudomonas aeruginosa 2192] gi|296391943|ref|ZP_06881418.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110133|ref|ZP_07796035.1| putative amino acid transporter permease protein [Pseudomonas aeruginosa 39016] gi|115588463|gb|ABJ14478.1| putative amino acid transporter permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170129|gb|EAZ55640.1| hypothetical protein PACG_04324 [Pseudomonas aeruginosa C3719] gi|126197402|gb|EAZ61465.1| hypothetical protein PA2G_04857 [Pseudomonas aeruginosa 2192] gi|218774422|emb|CAW30239.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310882537|gb|EFQ41131.1| putative amino acid transporter permease protein [Pseudomonas aeruginosa 39016] Length = 283 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A IS+L LAA+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|315284931|gb|EFU44376.1| ABC transporter, permease protein [Escherichia coli MS 110-3] Length = 354 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF + Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGANPSQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|157151308|ref|YP_001450345.1| phosphate transport protein PstC [Streptococcus gordonii str. Challis substr. CH1] gi|157076102|gb|ABV10785.1| phosphate ABC transporter, permease protein PstC [Streptococcus gordonii str. Challis substr. CH1] Length = 305 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 5/133 (3%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148 S + +L P ++++ IP + GF+ VV + +++ G G L+ IF +F + Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILP 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +TF SL +PR E S + + WQ W + + + PG+ ++ M+ + + Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARPGIFTAVVFGMARAFGEAL 229 Query: 209 ASEMIVVGDTVIP 221 A +M+V V+P Sbjct: 230 AIQMVVGNSAVVP 242 >gi|89902501|ref|YP_524972.1| nitrate transport permease [Rhodoferax ferrireducens T118] gi|89347238|gb|ABD71441.1| nitrate transport permease [Rhodoferax ferrireducens T118] Length = 288 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + ++A ++ IP+G IG P + PF Q+L + PL + Y Sbjct: 100 SLGRVGLGFLLAMLVAIPLGFVIGMSPLMRKAFDPFIQVLKPISPLAWMPLAL-----YT 154 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + +IF + W +L N G +A ++ VA + + R +ILP P Sbjct: 155 IKDSSASGIFVIFICSIWPMLVNTAFGVAAVKREWLNVARTLEVNPLRTAFQVILPAAAP 214 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S P V+ + ++ Sbjct: 215 TILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSLPNVIFAIGVIGV 268 Query: 565 FVLALN 570 + L+ Sbjct: 269 VGMLLD 274 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 7/127 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + + IF IF +W M + + + R+ V+R+ ++ + + + +P + P ++ Sbjct: 158 SSASGIFVIFICSIWPMLVNTAFGVAAVKREWLNVARTLEVNPLRTAFQVILPAAAPTIL 217 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +SM W +VA+EM+V G GIG ++ L +++A + ++GV+ Sbjct: 218 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLPNVIFA-IGVIGVVG 270 Query: 254 LYDQLLF 260 + LLF Sbjct: 271 MLLDLLF 277 >gi|84686267|ref|ZP_01014162.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Maritimibacter alkaliphilus HTCC2654] gi|84665794|gb|EAQ12269.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2654] Length = 277 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + +LSA V+ + AA +L + P+LD+MQ++P +L +V+ Sbjct: 91 EETTESLTLVLSACVVCMAIGVPIGIAAAHRPKLYAGMRPVLDLMQTLPTFVYLIPAIVF 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG LA + + + + +T + + + P L+E +++F +G Q W Sbjct: 151 FGIGMVPGL-----LATVIFVLPAPI-RLT---HLGISSTPMALKEAAQAFGATGRQLLW 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 202 KVELPYALPQIMTGLNQTIMLSLS 225 >gi|242239916|ref|YP_002988097.1| nitrate ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242131973|gb|ACS86275.1| nitrate ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 304 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 8/128 (6%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L + R + + P++ +++ + L +L ++ F AE A+ + IF +W Sbjct: 136 LIGRFRFMAAMFNPLIALLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIW 187 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 M + + + IP+D V+R RLS + + + +P +P ++ + +S+ W +V Sbjct: 188 PMILNTAEGVRRIPQDYLNVARVLRLSEFTIMYKILLPAVLPSVLTGVRLSIGIAWLVIV 247 Query: 209 ASEMIVVG 216 A+EM+ G Sbjct: 248 AAEMLTGG 255 >gi|82778052|ref|YP_404401.1| glycine betaine transporter membrane protein [Shigella dysenteriae Sd197] gi|309786249|ref|ZP_07680877.1| glycine betaine/L-proline transport system permease protein proW [Shigella dysenteriae 1617] gi|81242200|gb|ABB62910.1| high-affinity transport system for glycine betaine and proline [Shigella dysenteriae Sd197] gi|308925994|gb|EFP71473.1| glycine betaine/L-proline transport system permease protein proW [Shigella dysenteriae 1617] Length = 354 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + FA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTITFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 278 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 279 VVIASMIAVG-------GLGQMVLRGIGRLDM 303 >gi|332286150|ref|YP_004418061.1| substrate-binding region of ABC-type glycine betaine transport system [Pusillimonas sp. T7-7] gi|330430103|gb|AEC21437.1| substrate-binding region of ABC-type glycine betaine transport system [Pusillimonas sp. T7-7] Length = 654 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + ++S++ +AA+SR L VL P+LD+MQ++P +L V+ L GKV Sbjct: 464 VLVSTLVSIVLGVPIGIIAARSRLLRRVLTPVLDVMQTLPSFVYL-IPVLMLFGL--GKV 520 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 A+FA V + L + RD+ E +++F ++ WQ + +P + P Sbjct: 521 -----PALFATIIYAVPPLIRLTILGLRQVDRDVMEAAQAFGVTRWQMLTRVTLPLARPS 575 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + VV + MI Sbjct: 576 IMAGINQTTMMALAMVVVASMI 597 >gi|296437343|gb|ADH19513.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis G/11222] Length = 589 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + +++Q + N P +L E ++ + WQK + L +P +P + + ++MS F +A Sbjct: 130 LALTIHQGIENSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267 E + G+G I + + D+ L + LTML + Y LL + Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERRTFFF 243 Query: 268 NKFRLERTTGIYPADSWVLYL 288 FR+E+T+ WV L Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262 >gi|262282375|ref|ZP_06060143.1| phosphate ABC transporter, permease PstC [Streptococcus sp. 2_1_36FAA] gi|262261666|gb|EEY80364.1| phosphate ABC transporter, permease PstC [Streptococcus sp. 2_1_36FAA] Length = 305 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ VV + +++ G G L+ IF +F + +TF Sbjct: 117 ILQPAIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILPTVTFMT 175 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 176 TDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARPGIFTAVVFGMARAFGEALAIQMVV 235 Query: 215 VGDTVIP 221 V+P Sbjct: 236 GNSAVVP 242 >gi|212696313|ref|ZP_03304441.1| hypothetical protein ANHYDRO_00850 [Anaerococcus hydrogenalis DSM 7454] gi|212676942|gb|EEB36549.1| hypothetical protein ANHYDRO_00850 [Anaerococcus hydrogenalis DSM 7454] Length = 281 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 31/156 (19%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149 +KS + V++P+LD MQ++P +L V +F + + PG + +S ++ Sbjct: 119 SKSESVEKVIMPLLDFMQTMPAFVYLIPAVSFFGIGMAPG------------VISSIIFA 166 Query: 150 MTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 M ++ + + +P DL E + SF + QK + L +P + P G+ +M+++S Sbjct: 167 MPPAVRMTNLGIKEVPSDLVEAADSFGSTPKQKLFELELPMAKPSIMAGINQTLMLTLS- 225 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+VV ++I PG+G+ I ++ D+ Sbjct: 226 ---------MVVVA-SMIGAPGLGNVIYTSVSRNDV 251 >gi|322831482|ref|YP_004211509.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] gi|321166683|gb|ADW72382.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] Length = 399 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+R ++ P+LD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 214 ARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPVVRL 268 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E ++SF S Q + + +P +MP G+ +M+++S Sbjct: 269 TI---LGINQVPEDLIEAAKSFGSSPRQLLFKVQLPLAMPTIMAGINQTLMLALS----M 321 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 322 VVIASMIAVG-------GLGQMVLRGIGRLDM 346 >gi|292487853|ref|YP_003530728.1| aliphatic sulfonate ABC transporter permease [Erwinia amylovora CFBP1430] gi|292899079|ref|YP_003538448.1| aliphatic sulfonates ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198927|emb|CBJ46037.1| putative aliphatic sulfonates ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291553275|emb|CBA20320.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia amylovora CFBP1430] gi|312171975|emb|CBX80232.1| Aliphatic sulfonate ABC transporter, permease protein [Erwinia amylovora ATCC BAA-2158] Length = 263 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 24/189 (12%) Query: 95 RLGMVLVPI-LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ + +++++P L + +++F K+ L +F I+ + Sbjct: 91 RLGERLLDTSVQMLRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------IN 142 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + NI L E++RS+ LSGW F + +P ++P ++ + ++ W + Sbjct: 143 TWHGIRNIDHGLLEMARSYGLSGWSLFMQVVLPGALPSMMVGVRFALGLMWL------TL 196 Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWS 267 +V +T+ GIG Y+A+ +E D++ ILYA+L L QLL R + W Sbjct: 197 IVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADA--SAQLLERTWLRWH 253 Query: 268 NKFRLERTT 276 ++L+ Sbjct: 254 PAYQLKEEN 262 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G + E+A S+ ++GW + ++LPG P + G A Sbjct: 130 LVALGTLFPIYINTWHGIRNIDHGLLEMARSYGLSGWSLFMQVVLPGALPSMMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571 G W IV+E S +G+G Y+A + + +VV+ +I+ + L Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADASA 242 Query: 572 -------FLWHPLY 578 WHP Y Sbjct: 243 QLLERTWLRWHPAY 256 >gi|254439504|ref|ZP_05052998.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198254950|gb|EDY79264.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 510 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 5/161 (3%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + + YQ+V + LG ++FRV+V ++ + I IP+G +G P + + Sbjct: 302 IAKYGYQNVYLTVHLG-FSLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRP 360 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P PLV+ + L+ W + +G S A S Sbjct: 361 VPPLALIPLVIIWFGIGEVGK----IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLG 416 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 + W+ R++I+P P TGA A G W + +E+ + Sbjct: 417 ASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA 457 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F IG E+ IF +F + +W M + + + Sbjct: 353 PIVEFMRPVPPLALIPLVIIWFG-------IG-EVGKIFLLFLAALWIMAIAARSGVSGV 404 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ ++ +P S+P + ++M W VVA+E++ + Sbjct: 405 RITKVHAAYSLGASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEE---- 460 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 GIG I A K Q+ IL ++ + V F D L+ R ++ W K Sbjct: 461 --GIGKMITTASKFQNTDIILLGVIIIGLVGFGIDMLMRWAERSLVPWKGK 509 >gi|255311697|ref|ZP_05354267.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis 6276] gi|255317998|ref|ZP_05359244.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis 6276s] gi|296436412|gb|ADH18586.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis G/9768] gi|296438271|gb|ADH20432.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis G/11074] gi|297140772|gb|ADH97530.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis G/9301] Length = 589 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + +++Q + N P +L E ++ + WQK + L +P +P + + ++MS F +A Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267 E + G+G I + + D+ L + LTML + Y LL + Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243 Query: 268 NKFRLERTTGIYPADSWVLYL 288 FR+E+T+ WV L Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262 >gi|237803287|ref|YP_002888481.1| ABC transporter permease [Chlamydia trachomatis B/Jali20/OT] gi|231274521|emb|CAX11317.1| ABC transporter permease [Chlamydia trachomatis B/Jali20/OT] Length = 589 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + +++Q + N P +L E ++ + WQK + L +P +P + + ++MS F +A Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267 E + G+G I + + D+ L + LTML + Y LL + Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243 Query: 268 NKFRLERTTGIYPADSWVLYL 288 FR+E+T+ WV L Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262 >gi|15605590|ref|NP_220376.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis D/UW-3/CX] gi|3329327|gb|AAC68451.1| ABC transporter permease fused to pyrimidine biosynthesis enzyme [Chlamydia trachomatis D/UW-3/CX] gi|297748981|gb|ADI51527.1| ABC transporter permease protein [Chlamydia trachomatis D-EC] gi|297749861|gb|ADI52539.1| ABC transporter permease protein [Chlamydia trachomatis D-LC] Length = 589 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + +++Q + N P +L E ++ + WQK + L +P +P + + ++MS F +A Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267 E + G+G I + + D+ L + LTML + Y LL + Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTMLTLSLFYSVLLLERSTFFF 243 Query: 268 NKFRLERTTGIYPADSWVLYL 288 FR+E+T+ WV L Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262 >gi|33595618|ref|NP_883261.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33600132|ref|NP_887692.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33565696|emb|CAE40344.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] gi|33567730|emb|CAE31644.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] Length = 285 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 6/144 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV +A IP+G+ IG+ S + P Q L P + P ++ Sbjct: 92 STMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIRD 151 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + S+ +IF G + I+ N GA + AS + + R ++LP P Sbjct: 152 MG-----SIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMP 206 Query: 505 YYVTGAITACGGAWNASIVSEVAS 528 TG G +W A IVSE+ + Sbjct: 207 SIFTGLRIGLGISWTAVIVSEMVA 230 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 8/123 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR +L P++ ++ IPI +L F++ F ++ +IF IF + + Sbjct: 117 SRLTSQLLDPLIQGLRPIPITAWLPFSIALFGI--------RDMGSIFLIFLGGFYAIVV 168 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Q ++ R+L + S Q + +P +MP + + + + W V+ SEM Sbjct: 169 NTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMPSIFTGLRIGLGISWTAVIVSEM 228 Query: 213 IVV 215 + V Sbjct: 229 VAV 231 >gi|50121917|ref|YP_051084.1| nitrate transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612443|emb|CAG75893.1| nitrate transporter permease component [Pectobacterium atrosepticum SCRI1043] Length = 280 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L +L PI+ +++ + L +L ++ F AE A+ + IF +W M + Sbjct: 119 LANMLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIWPMILNTA 170 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + IP+D V+R +LS + + +P +P ++ + +S+ W +VA+EM+ Sbjct: 171 EGVRRIPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGIAWLVIVAAEMLTG 230 Query: 216 G 216 G Sbjct: 231 G 231 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ IP G IG +++ + P LL + P + Sbjct: 86 WNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP--IGL 143 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + P S + + W ++ N G P D+ VA ++ + R I+LP Sbjct: 144 LLFQRAEPAS--SWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEFTIMRKILLP 201 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWG 530 + P +TG + G AW + +E+ + G Sbjct: 202 AVLPNVLTGVRLSIGIAWLVIVAAEMLTGG 231 >gi|15600288|ref|NP_253782.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9951390|gb|AAG08480.1|AE004922_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 283 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A IS+L LAA+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|325272379|ref|ZP_08138777.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] gi|324102504|gb|EGB99952.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] Length = 236 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ V ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 44 SLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 103 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L IF I G A S + + R++ILP P Sbjct: 104 LSKVL-LIFLAIFAP---IAIATATGVRTVDPAKLRAAQSLGASKAQLIRHVILPSALPD 159 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 160 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 213 Query: 566 VLALNRFL 573 AL L Sbjct: 214 AFALEMSL 221 >gi|188583461|ref|YP_001926906.1| ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179346959|gb|ACB82371.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium populi BJ001] Length = 250 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 16/155 (10%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 ++ +++ IP L ++ F +++F + P AA+F I W + F+ ++ + Sbjct: 96 VVRLLRPIPGLAWVPFAIIWF-GVQPS-------AAVFIIAIGVFWIVFFATQGAVRGVD 147 Query: 163 RDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 RDL EV+++F G + + +P + PG++ + ++ W VVA+E+ V Sbjct: 148 RDLIEVAQAFGFRGPLARLTKILLPAATPGILVGLRTALGQAWMAVVAAEIFGV------ 201 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 PGIG+ + A ++ MLTM + L+D Sbjct: 202 -PGIGARMMQASSLLSTDIVVVYMLTMAALYGLFD 235 >gi|21241618|ref|NP_641200.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] gi|21106977|gb|AAM35736.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] Length = 283 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 28/208 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ I + + + VG+ +G + + P Q L A P+ + PL++ Sbjct: 79 SVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLL------- 131 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW+ + L+ G + + V++G E+ S+ ++ R R I+ Sbjct: 132 ----LWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRIL 187 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG T+ AW + +E+ + T GLG +++ E S P++V+G Sbjct: 188 LPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRET-SRPDIVIG 240 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLR 586 +++ + L+ L + +R LR Sbjct: 241 AIVLLALLGKLSDGLLKSIE---SRTLR 265 >gi|254422823|ref|ZP_05036541.1| nitrate ABC transporter, permease protein [Synechococcus sp. PCC 7335] gi|196190312|gb|EDX85276.1| nitrate ABC transporter, permease protein [Synechococcus sp. PCC 7335] Length = 279 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 11/196 (5%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + L + W I++ RV + +AS+I +P+GI IG P P+ QLL + Sbjct: 79 NDLGIGWNLLISLRRVAIGYTLASLIAVPLGILIGISPIAYKAFNPYVQLLKPVSPLAWL 138 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + Y + + +++ + W L N G + ++ +V+ + + R Sbjct: 139 PLGL----YIFRDSEITGIFIILISSIWPTLTNTAFGVANVSPEYLDVSKTLGASRLRTI 194 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 II+P P V+G + G +W + +E+ L TGLG +I P Sbjct: 195 FKIIIPAALPNIVSGLRISMGISWLVIVAAEM-------LLGTGLGYFIWNEWNNLYIPN 247 Query: 555 VVLGVLIMCCFVLALN 570 +++ + I+ L L+ Sbjct: 248 ILVAIFIIGLVGLILD 263 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/81 (24%), Positives = 43/81 (53%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +E+ IF I S +W + + N+ + +VS++ S + + + +P ++P +V Sbjct: 148 SEITGIFIILISSIWPTLTNTAFGVANVSPEYLDVSKTLGASRLRTIFKIIIPAALPNIV 207 Query: 194 WNMMMSMSGGWFFVVASEMIV 214 + +SM W +VA+EM++ Sbjct: 208 SGLRISMGISWLVIVAAEMLL 228 >gi|262281922|ref|ZP_06059691.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA] gi|262262376|gb|EEY81073.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA] Length = 574 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|118592851|ref|ZP_01550240.1| Binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] gi|118434621|gb|EAV41273.1| Binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] Length = 319 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 14/181 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++M R+++ I A++I I G+ +G I S I P+ ++L PA + PL + Sbjct: 125 AVSMQRILIGYITAAVIGILAGVLMGRSKLIRSLIYPYIEVLRPIPAVAWIPLAI----- 179 Query: 444 YHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 + P S++ I G + I+ N + G P A S + + + ++ILP Sbjct: 180 -LMWPTEEASIIYITLLGALFPIVLNTLHGVEQTPEVLVRAAKSLGASRLQIFWHVILPA 238 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P G G +W + + E+ S + G+G + + ++P++V+G+L+ Sbjct: 239 ALPSIAAGLAIGMGVSWFSLLAGEIISGQY------GIGYFTWNAYSLINYPDIVVGMLV 292 Query: 562 M 562 + Sbjct: 293 I 293 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 40/204 (19%), Positives = 93/204 (45%), Gaps = 17/204 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L + + + + L +S+ + ++ P +++++ IP + ++ ++ ++P + Sbjct: 130 RILIGYITAAVIGILAGVLMGRSKLIRSLIYPYIEVLRPIPAVAWIPLAIL----MWPTE 185 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 E + I+ ++ + + + P L ++S S Q FW++ +P ++P Sbjct: 186 ----EASIIYITLLGALFPIVLNTLHGVEQTPEVLVRAAKSLGASRLQIFWHVILPAALP 241 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM-- 248 + + + M WF ++A E I+ G GIG + A + I+ ML + Sbjct: 242 SIAAGLAIGMGVSWFSLLAGE-IISGQY-----GIGYFTWNAYSLINYPDIVVGMLVIGG 295 Query: 249 LGVIFLYD-QLLFRPMIVWSNKFR 271 LG + Y +L +P++ W + R Sbjct: 296 LGTLSTYAVRLAMQPLLAWQKRAR 319 >gi|293408514|ref|ZP_06652353.1| conserved hypothetical protein [Escherichia coli B354] gi|291471692|gb|EFF14175.1| conserved hypothetical protein [Escherichia coli B354] Length = 275 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|283458841|ref|YP_003363485.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Rothia mucilaginosa DY-18] gi|283134900|dbj|BAI65665.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Rothia mucilaginosa DY-18] Length = 280 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/154 (20%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L ++ + +T R+L I + V L S + ++ P + ++++P L ++ Sbjct: 81 ELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIAAPTIGALRAVPSLAWVPLL 140 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ KV + A F ++T+ + +L ++ L E +R+F L G + Sbjct: 141 LLWIGIGENSKVTLVAIGAFFPVYTT--------VSAALAHVDPKLVEAARAFGLKGLRL 192 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 F + +P +P +V + ++++ W F+VA+E++ Sbjct: 193 FTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELL 226 >gi|256392966|ref|YP_003114530.1| binding-protein-dependent transporters inner membrane component [Catenulispora acidiphila DSM 44928] gi|256359192|gb|ACU72689.1| binding-protein-dependent transport systems inner membrane component [Catenulispora acidiphila DSM 44928] Length = 314 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + + LR+L +I+ L A+SR +L P+L++++ IP + + ++ Sbjct: 113 QDIAASLLRILGGFLIAGLAGIGTGIALARSRFAEDILGPLLEVVRPIPAIALVPIAILA 172 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + G V AA F I S ++ +P +E+ R+ W Sbjct: 173 FPSNEQGMVFITATAAFFPIL--------VSTRHAVRALPTVVEDAVRTLGAGRWTVLRR 224 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++PG+ + + M W V+++EMI Sbjct: 225 VVLPGALPGVFGGLSVGMGVAWICVISAEMI 255 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 95/263 (36%), Gaps = 42/263 (15%) Query: 350 CVVCGVAIGIAWQ-----------------SIGYIVNHFTYQDVLYVIWLG-CITMFRVV 391 CV G AI +AWQ S G + F +Q V + ++ R++ Sbjct: 65 CVSLGAAI-LAWQLLTTHQVTFWIRFGNLPSAGAVATDFRHQLGTAVYYQDIAASLLRIL 123 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 +IA + I GI + + P +++ PA P+ + P+ Sbjct: 124 GGFLIAGLAGIGTGIALARSRFAEDILGPLLEVVRPIPAIALVPIAILAF------PSNE 177 Query: 452 LSLLMIFGTQWY--ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 ++ I T + IL + A P ++ + W R ++LPG P G Sbjct: 178 QGMVFITATAAFFPILVSTRHAVRALPTVVEDAVRTLGAGRWTVLRRVVLPGALPGVFGG 237 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM------- 562 G AW I +E+ S + G+G E+ +P VV+G+L + Sbjct: 238 LSVGMGVAWICVISAEMISGQY------GIGYRTWEAYTVVDYPSVVVGMLTIGLLGGAT 291 Query: 563 -CCFVLALNRFL-WHPLYLYGTR 583 LA R W P G+R Sbjct: 292 AAAVELAGRRVTGWLPRGTEGSR 314 >gi|186470976|ref|YP_001862294.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184197285|gb|ACC75248.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 284 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%) Query: 361 WQS-IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 WQ+ I + N + Q ++ I + C FR+V+ + A I +P+G+ + + I Sbjct: 70 WQAFIEIVRNGYGGQSLISDILISC---FRIVIGFVGAIAIGVPIGLLMSRNKIVFDIID 126 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q + P + PL+V L ++L++ GT I+ ++G + P Sbjct: 127 PLLQFVRPVPPLAYIPLLVVWFGIGELPK----AILILVGTIPVIIIGTMSGVKSTPPLR 182 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + + + +R ++LP P T G AW + +E+ + ++GL Sbjct: 183 ISVARTLGASNAQIFRKVVLPSALPEIFTAMRVGIGVAWTCLVAAELIA------ASSGL 236 Query: 540 G 540 G Sbjct: 237 G 237 >gi|319794601|ref|YP_004156241.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315597064|gb|ADU38130.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 257 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 21/210 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +TTL L +++L A + A SR + + P+L QSIP + VV+F Sbjct: 61 KTTLATLGGFGLTILIGIPIAMVIAYSRLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFG 120 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + P KVI A L F + S V M F ++ D+ +++RS S Q F+ + + Sbjct: 121 ILP-KVISAFLLGFFPVVVSTV--MGFK------SVEPDMLDLARSMGASRLQTFFKISL 171 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + + +S++ +A VVG+ V GIG + +A D L +++A Sbjct: 172 PQALPAIFSGLKVSVT------LAVVGAVVGEFVGSNSGIGYVLQVANGNFD-LPLMFAA 224 Query: 246 LTMLG----VIFLYDQLLFRPMIVWSNKFR 271 L +L V+F+ L+ R MI W R Sbjct: 225 LVVLSSIGVVLFVAVDLVERLMIPWHASQR 254 >gi|239501805|ref|ZP_04661115.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii AB900] Length = 284 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVFGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAI------L 144 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ S++ I G + IL N + G A A S + +I+PG Sbjct: 145 IFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGAL 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG G W + +E+ S H G+G + ES ++ +V+G++++ Sbjct: 205 PNIITGLSIGMGTCWFCLVTAEMISGQH------GIGYFTWESFTLQNYSNIVVGMVLI 257 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/239 (17%), Positives = 102/239 (42%), Gaps = 18/239 (7%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +N+ P D++ + + + ++ + R++ V++ L LA Sbjct: 55 VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVFGFVLAALIGVGIGLLAG 114 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + ++L L+P L++++ IP + ++ ++ F + +E + IF F ++ + Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPS--------SEASMIFITFIGALFPIL 166 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S S + +P ++P ++ + + M WF +V +E Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 MI GIG + + Q+ I+ M+ ++G + ++ L R V N+F Sbjct: 227 MISGQH------GIGYFTWESFTLQNYSNIVVGMV-LIGALGMFSSTLVR---VIGNRF 275 >gi|171741918|ref|ZP_02917725.1| hypothetical protein BIFDEN_01017 [Bifidobacterium dentium ATCC 27678] gi|283457058|ref|YP_003361622.1| ABC transporter permease [Bifidobacterium dentium Bd1] gi|306824033|ref|ZP_07457406.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|309800758|ref|ZP_07694893.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|171277532|gb|EDT45193.1| hypothetical protein BIFDEN_01017 [Bifidobacterium dentium ATCC 27678] gi|283103692|gb|ADB10798.1| Permease protein of ABC transporter system [Bifidobacterium dentium Bd1] gi|304552686|gb|EFM40600.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|308222603|gb|EFO78880.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 275 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 12/179 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A++I +P+G+ +G S+ ++P L+ P + PL + + + ++ Sbjct: 90 LAALIGVPLGVLMGRSKIASAMLEPTINLIRPIPVTAWVPLTLIMIGIGDRS-----TIF 144 Query: 456 MIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++F + I+ N + P E A+ + + ++ P P + G A Sbjct: 145 LVFLAALFPIILNTVTAVEQVPERLLEAAAMLGTSKGKALWKVVFPAALPGIIGGLRVAV 204 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G AW +V E+ T GLGA I E+ +V G+ I+ +R + Sbjct: 205 GLAWALLVVGEMTGI------TVGLGAMITEAKNVSKTDLIVAGMFIIGILGFLSDRLI 257 >gi|260588477|ref|ZP_05854390.1| putative ABC transporter, permease protein [Blautia hansenii DSM 20583] gi|331082246|ref|ZP_08331373.1| hypothetical protein HMPREF0992_00297 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540952|gb|EEX21521.1| putative ABC transporter, permease protein [Blautia hansenii DSM 20583] gi|330403040|gb|EGG82605.1| hypothetical protein HMPREF0992_00297 [Lachnospiraceae bacterium 6_1_63FAA] Length = 255 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 5/143 (3%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 C ++FR++ +A + + G P I P + + P F L++ V Sbjct: 62 CFSLFRIIGGFFLAVLAGVLGGSIASRLPKIQELFAPLILAMKSVPVASFVILILIWVPS 121 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+ + S LM+F I NV+ G + E+A F ++G RYI L + Sbjct: 122 ENLSVTI--SFLMVFPV---IYTNVLNGIQNTDKNLLEMAQVFQVSGKNKIRYIYLSEVL 176 Query: 504 PYYVTGAITACGGAWNASIVSEV 526 P++ G + G W A + +EV Sbjct: 177 PFFRAGCSVSLGLCWKAGVAAEV 199 >gi|220914798|ref|YP_002490106.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219952549|gb|ACL62939.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 283 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 8/157 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++A +T R+L+ VI+ L + T SR L P L +++ +P + ++ +++ Sbjct: 80 RHALSSTWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRPVPPVSWIPLAIIW 139 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F A+ AIF +F + + + I R+L +G Q + Sbjct: 140 FGI--------ADKPAIFLVFLGAFFPTLMNTIHGVKTIDRNLIRAGAMMGATGRQLLMH 191 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 + VP ++P + + +++ W V +EM+ V V Sbjct: 192 IVVPAALPSIFAGLRIAIGSAWMLTVTAEMVAVKSGV 228 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + +RV+ +IA + I +G IG+ ++P Q+L P + PL + Sbjct: 85 STWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRPVPPVSWIPLAIIWFGIAD 144 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P ++L L F + L N I G + + TG + +I++P P Sbjct: 145 -KPAIFLVFLGAF---FPTLMNTIHGVKTIDRNLIRAGAMMGATGRQLLMHIVVPAALPS 200 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 G A G AW ++ +E+ + Sbjct: 201 IFAGLRIAIGSAWMLTVTAEMVA 223 >gi|115361274|ref|YP_778411.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|115286602|gb|ABI92077.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] Length = 295 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + ++F FV +LA +R VL + + +P + L +++F L G + Sbjct: 102 LLRGYALGVVFAFVLTSLAVSTRIGRDVLTMLTAMFNPLPSIALLPIALLWF-GLGTGSL 160 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + F + + +W + SMY +P L+ R++ L+G ++ + VP ++P Sbjct: 161 L-------FVLVHAVLWPLALSMYTGFAGVPATLKMAGRNYGLTGARQIALILVPAALPS 213 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 214 ILSGLRVGWAFAWRTLIAAELV 235 >gi|328945845|gb|EGG39996.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|327468560|gb|EGF14039.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|308179620|ref|YP_003923748.1| Putative aliphatic sulfonates transport permease protein ssuC [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045111|gb|ADN97654.1| Putative aliphatic sulfonates transport permease protein ssuC [Lactobacillus plantarum subsp. plantarum ST-III] Length = 337 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 10/144 (6%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P+ +++ PA + PL + ++ L+ F + + F I G ++ Sbjct: 179 PYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFMTIGGVQGISKEY 234 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 E A + + W+ R I+LPG P TG TA G ++ ++SE+ GL Sbjct: 235 FESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMIG------AKVGL 288 Query: 540 GAYIAESTEKGSFPEVVLGVLIMC 563 G +I + G++ +V ++IM Sbjct: 289 GWFINWAKGTGNYTQVYAAIVIMA 312 >gi|293393333|ref|ZP_06637646.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291424153|gb|EFE97369.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 279 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ ++ A +I +PVGI +G + + P ++ P + PL+V Sbjct: 85 AASLGRILLALLAAVMIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGI 144 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A + W+ R+++LP Sbjct: 145 GETS-KILLIYLAIFAP---VTLSTVAGVRSVAQVRLRAARALGANRWQVLRFVVLPNAL 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 201 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 254 Query: 564 CFVLALN 570 L Sbjct: 255 IIAFGLE 261 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P+++I + +P L +L V++F IG E + I I+ + +T S + Sbjct: 118 ILDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLSTVAGV 169 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ + WQ ++ +P ++P ++ + + + GW +VA+E+I Sbjct: 170 RSVAQVRLRAARALGANRWQVLRFVVLPNALPEILTGIRIGLGVGWSTLVAAELI 224 >gi|206577969|ref|YP_002237923.1| nitrate ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288934833|ref|YP_003438892.1| nitrate ABC transporter inner membrane protein [Klebsiella variicola At-22] gi|290508976|ref|ZP_06548347.1| nitrate ABC transporter, permease [Klebsiella sp. 1_1_55] gi|206567027|gb|ACI08803.1| nitrate ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889542|gb|ADC57860.1| nitrate ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778370|gb|EFD86367.1| nitrate ABC transporter, permease [Klebsiella sp. 1_1_55] Length = 294 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 139 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 190 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 191 PQDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%) Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 YQD + + W ++ RV V +A++ IP+G IG + P LL Sbjct: 89 YQDGPNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVS 148 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + P + + + P S + + W ++ N G P D+ VA ++ Sbjct: 149 PLAWLP--IGLLLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLS 204 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 W R I+ P + P +TG + G AW + +E+ + G Sbjct: 205 EWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245 >gi|126699086|ref|YP_001087983.1| putative aliphatic sulfonate ABC transporter permease [Clostridium difficile 630] gi|255100508|ref|ZP_05329485.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-63q42] gi|115250523|emb|CAJ68347.1| ABC-type transport system, sulfonates-family permease [Clostridium difficile] Length = 256 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 24/181 (13%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+++ +I+S++ IP+G+ G + +P + + + P P+++ Sbjct: 65 RILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 114 Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 LW + ++I + + I N + G N EV SF+++ R + II+P Sbjct: 115 -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPN 173 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 V G G ++ A I +E+ + ++GLG I++ + V++G+ + Sbjct: 174 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 227 Query: 562 M 562 + Sbjct: 228 I 228 >gi|27464137|gb|AAO15989.1|AF514870_5 Abc2 [Lactobacillus plantarum] Length = 337 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 10/144 (6%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P+ +++ PA + PL + ++ L+ F + + F I G ++ Sbjct: 179 PYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFMTIGGVQGISKEY 234 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 E A + + W+ R I+LPG P TG TA G ++ ++SE+ GL Sbjct: 235 FESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMIG------AKVGL 288 Query: 540 GAYIAESTEKGSFPEVVLGVLIMC 563 G +I + G++ +V ++IM Sbjct: 289 GWFINWAKGTGNYTQVYAAIVIMA 312 >gi|324994216|gb|EGC26130.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325697943|gb|EGD39827.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|323353440|ref|ZP_08087973.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322121386|gb|EFX93149.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|332383238|gb|AEE68085.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis CS] Length = 285 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 6/144 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV +A IP+G+ IG+ S + P Q L P + P ++ Sbjct: 92 STMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIRD 151 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + S+ +IF G + I+ N GA + AS + + R ++LP P Sbjct: 152 MG-----SIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMP 206 Query: 505 YYVTGAITACGGAWNASIVSEVAS 528 TG G +W A IVSE+ + Sbjct: 207 SIFTGLRIGLGISWTAVIVSEMVA 230 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 8/123 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR +L P++ ++ IPI +L F++ F ++ +IF IF + + Sbjct: 117 SRLTSQLLDPLIQGLRPIPITAWLPFSIALFGI--------RDMGSIFLIFLGGFYAIVV 168 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Q ++ R+L + S Q + +P +MP + + + + W V+ SEM Sbjct: 169 NTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMPSIFTGLRIGLGISWTAVIVSEM 228 Query: 213 IVV 215 + V Sbjct: 229 VAV 231 >gi|327490635|gb|EGF22416.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|114761135|ref|ZP_01441050.1| Binding-protein-dependent transport systems inner membrane component [Pelagibaca bermudensis HTCC2601] gi|114545383|gb|EAU48385.1| Binding-protein-dependent transport systems inner membrane component [Roseovarius sp. HTCC2601] Length = 256 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 103/222 (46%), Gaps = 20/222 (9%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + LD +L ++AS T L+ ++ + A S + + P + Q IP + Sbjct: 48 VALDPRTL-RHASITLTETLAGFGLATVIGMTVGWAVAASPLIERAVHPFIVASQVIPKV 106 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 + VV+F K++ A + A F + + V L ++ +V S + Sbjct: 107 ALVPLFVVWFGFGMTSKIVVAAVIAFFPVLVNTVLG--------LRSVQPGHADVFHSLK 158 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 + WQ+ W L +P ++P ++ M M++ V+A+ VVG+ + G+G Y+A+A Sbjct: 159 ATLWQRIWLLQIPSALPAILAGMEMAI------VLATIGAVVGEFLGGSSGLG-YMAVAT 211 Query: 234 K---EQDLLAILYAMLTMLG-VIFLYDQLLFRPMIVWSNKFR 271 + D L ++ +LT++G V++ L R ++ WS+ + Sbjct: 212 MNAFQTDRLFVIIILLTLIGFVLYAMMAGLKRALVSWSDNQK 253 >gi|83953214|ref|ZP_00961936.1| putative nitrate transporter [Sulfitobacter sp. NAS-14.1] gi|83842182|gb|EAP81350.1| putative nitrate transporter [Sulfitobacter sp. NAS-14.1] Length = 357 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 66/129 (51%), Gaps = 11/129 (8%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + + +I +DL VSR +++ + K L +P ++P + + +S+ GW Sbjct: 234 SLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260 ++A+EM+ PG+G ++ + Q L I+ A+LT+ + FL D++++ Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVLTIGIIGFLLDRVMYAL 347 Query: 261 RPMIVWSNK 269 + M +SN Sbjct: 348 QSMFTFSNN 356 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 16/190 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453 +IASI+ IP+GI G ++ + P Q+ + P+V VS Y N ++ Sbjct: 162 LIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYSTNDGMFSK 221 Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 +I + W L N G ++ D V+ + + ++LP P Sbjct: 222 SFLISAITVTLCSLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S +++ VL + Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAVLTIGI 335 Query: 565 FVLALNRFLW 574 L+R ++ Sbjct: 336 IGFLLDRVMY 345 >gi|332364733|gb|EGJ42502.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|332364432|gb|EGJ42206.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|332363182|gb|EGJ40967.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|296269359|ref|YP_003651991.1| binding-protein-dependent transporter inner membrane component [Thermobispora bispora DSM 43833] gi|296092146|gb|ADG88098.1| binding-protein-dependent transport systems inner membrane component [Thermobispora bispora DSM 43833] Length = 277 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 13/193 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ RV+V ++ I + + G + + P Q++ P FF L+ + + Sbjct: 81 SVSLQRVLVGFTAGAVAGIGLALIAGLSRAGENAVDPLMQMIRTLP---FFGLIPLFILW 137 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + + LL+ + N AG EVA + ++ + R+I+LPG Sbjct: 138 FGIGETPKV-LLVALAVSVPLYLNTFAGIRGVDGKLAEVAQTLKLSRAQLIRHIVLPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G + G AW A IV+E I+ GLG I ++ E VV+G+L+ Sbjct: 197 PQTLVGLRQSLGVAWLALIVAE-----QINA-DAGLGFMINDAREFLRTDVVVVGLLVYS 250 Query: 564 CFVL---ALNRFL 573 L AL R L Sbjct: 251 ALGLLTDALVRLL 263 >gi|257462370|ref|ZP_05626784.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Fusobacterium sp. D12] gi|317060035|ref|ZP_07924520.1| glycine betaine/L-proline ABC transporter [Fusobacterium sp. D12] gi|313685711|gb|EFS22546.1| glycine betaine/L-proline ABC transporter [Fusobacterium sp. D12] Length = 329 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 31/170 (18%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAE 135 ++S+L L+AKS ++ +L PILD MQ++P +L V +F + + PG Sbjct: 106 LLSILIGIPLGILSAKSDQVEGILKPILDFMQTMPSFVYLIPAVAFFGIGIVPG------ 159 Query: 136 LAAIFAIFTSQVWNM--TFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS---- 188 +F S ++++ T M + IP +L EVS+SF + Q+ + P + Sbjct: 160 ------VFASIIFSLPPTVRMTNLGIRQIPEELIEVSKSFGTTKMQQLCGIEFPLAKNTI 213 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + G+ ++M+++S +VV ++I PG+G + A++ ++ Sbjct: 214 LAGINQSIMLALS-----------MVVTASMIGAPGLGRGVLEALQRAEV 252 >gi|271500181|ref|YP_003333206.1| binding-protein-dependent transporter inner membrane component [Dickeya dadantii Ech586] gi|270343736|gb|ACZ76501.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech586] Length = 263 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 21/196 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ S +T R L+ I V + SR +L + +++++P L + +++ Sbjct: 60 QHLSISTWRALTGFAIGGTLGLVLGFITGLSRTGERLLDTSMQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + Y + I L E++RS+ LSG++ F Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIRTIDSGLLEMARSYGLSGFRLFRE 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + S+ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VVLPGALPSIMVGVRFSLGLMWL------TLIVAETISASSGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTMLGVI 252 ILYA+L L I Sbjct: 225 VVAIILYALLGKLADI 240 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 21/203 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R + I + + +G G + Q+L P PLV+ + Sbjct: 63 SISTWRALTGFAIGGTLGLVLGFITGLSRTGERLLDTSMQMLRNVPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G + E+A S+ ++G+R +R ++LPG Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIRTIDSGLLEMARSYGLSGFRLFREVVLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G + G W IV+E S ++G+G Y+A + + +VV+ +I+ Sbjct: 179 PSIMVGVRFSLGLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILY 231 Query: 564 CFV--------LALNR--FLWHP 576 + L L R WHP Sbjct: 232 ALLGKLADIIALTLERLWLRWHP 254 >gi|186476406|ref|YP_001857876.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184192865|gb|ACC70830.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 283 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 20/184 (10%) Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 FRP I + Q++ PA PLV+ ++ + L L+ G + I N Sbjct: 111 FRP-IDIALDTTVQMIRNIPALAMIPLVIL---WFGIEEEAKL-FLVALGVFFPIYVNTY 165 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G + + E+A S+ + G+ +R +ILPG P + G A G W IV+E S Sbjct: 166 HGIRSVDANLIEMARSYGVKGFALYRDVILPGALPSILVGVRFAFGLMWVTLIVAETIS- 224 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC-------FVLALNR--FLWHPLYLY 580 +G+G + E VV+G+L+ L R WHP Y Sbjct: 225 -----AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADMLAKGLERVSLRWHPAYQR 279 Query: 581 GTRC 584 G + Sbjct: 280 GEKA 283 >gi|325693734|gb|EGD35653.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|325276455|ref|ZP_08142220.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] gi|324098415|gb|EGB96496.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] Length = 251 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 10/160 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+G+ +G H+ + P Q L + P+VV + P + L+ F W Sbjct: 81 PLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGVGD-QP---IYFLLAFAALW 136 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 IL N AG + +++ S T W +I+PG+ + +TG A G W + Sbjct: 137 PILLNTAAGVRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLV 196 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 E+ + GLG +I ++ ++ ++ E++ VL++ Sbjct: 197 PCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLI 230 >gi|300768942|ref|ZP_07078833.1| Abc2 protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493463|gb|EFK28640.1| Abc2 protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 337 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 10/144 (6%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P+ +++ PA + PL + ++ L+ F + + F I G ++ Sbjct: 179 PYLKVIGIIPAAAWMPLTMVIFPTSYMAE----VFLIAFSVWFPVAFMTIGGVQGISKEY 234 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 E A + + W+ R I+LPG P TG TA G ++ ++SE+ GL Sbjct: 235 FESAKTLGFSEWQIIRKIVLPGALPSIFTGVYTAMGLSFTMLVISEMIG------AKVGL 288 Query: 540 GAYIAESTEKGSFPEVVLGVLIMC 563 G +I + G++ +V ++IM Sbjct: 289 GWFINWAKGTGNYTQVYAAIVIMA 312 >gi|324992122|gb|EGC24044.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] Length = 574 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|306835145|ref|ZP_07468185.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium accolens ATCC 49726] gi|304569002|gb|EFM44527.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium accolens ATCC 49726] Length = 292 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 AMVI++ F + A R P + I++ + L +L + + A Sbjct: 116 AMVIAIPLGFWLGSSATFRR----ATDPFVQILRPVSPLAWLPLGLALLRD--------A 163 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A+F I S +W + +++ I + ++ + + Q+ Y+ P ++PG++ Sbjct: 164 ENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPTALPGIIT 223 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTV 219 M S+S W +VA+EM+V G V Sbjct: 224 GMRQSLSTAWLVIVAAEMLVGGQGV 248 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 7/169 (4%) Query: 361 WQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 W I++ Y+D + + W ++ RV++ IA +I IP+G W+G Sbjct: 77 WDRAVEILSDPFYRDGPASVGIFWHMVASLRRVLIGFAIAMVIAIPLGFWLGSSATFRRA 136 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 PF Q+L + PL ++ + ++I W L N I Sbjct: 137 TDPFVQILRPVSPLAWLPLGLALLRDAENTA----VFVIILSALWPTLLNTIEAVRGIHP 192 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 +K +A++ + YI+ P P +TG + AW + +E+ Sbjct: 193 TYKNLAATLGTNRMQQLLYIVGPTALPGIITGMRQSLSTAWLVIVAAEM 241 >gi|13473801|ref|NP_105369.1| taurine transport system permease protein [Mesorhizobium loti MAFF303099] gi|14024552|dbj|BAB51155.1| taurine transport system permease protein [Mesorhizobium loti MAFF303099] Length = 286 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV ++ A +I +PVG+ IG P + L P + PLV+ Sbjct: 95 SLGRVFAALVAALLIGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPLVIIWFGIGE 154 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L +++ M+ + + +G + A S T + R++ILP P Sbjct: 155 PSKILVIAIAMLA----PVALSTASGVRGVSQERINAARSLGATKRQVVRHVILPSALPS 210 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G W+ + +E+ + T GLG I + + V++G+L++ Sbjct: 211 ILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVIMGILVIAAI 264 Query: 566 VLALN 570 L Sbjct: 265 AFVLE 269 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+L+ ++ IP L +L +++F P K I I + + + S + + Sbjct: 129 PLLEFLRPIPPLAYLPLVIIWFGIGEPSK--------ILVIAIAMLAPVALSTASGVRGV 180 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ +RS + Q ++ +P ++P ++ + +++ GW +VA+E++ Sbjct: 181 SQERINAARSLGATKRQVVRHVILPSALPSILTGLRIALGAGWSTLVAAELV 232 >gi|83942159|ref|ZP_00954621.1| putative nitrate transporter [Sulfitobacter sp. EE-36] gi|83847979|gb|EAP85854.1| putative nitrate transporter [Sulfitobacter sp. EE-36] Length = 357 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 66/129 (51%), Gaps = 11/129 (8%) Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +W + + +I +DL VSR +++ + K L +P ++P + + +S+ GW Sbjct: 234 SLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWM 293 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF-- 260 ++A+EM+ PG+G ++ + Q L I+ A+LT+ + FL D++++ Sbjct: 294 VLIAAEMLAQN------PGLGKFVWDEFQNGSSQSLARIMVAVLTIGIIGFLLDRVMYAL 347 Query: 261 RPMIVWSNK 269 + M +SN Sbjct: 348 QSMFTFSNN 356 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 16/190 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453 +IASI+ IP+GI G ++ + P Q+ + P+V VS Y N ++ Sbjct: 162 LIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYSTNDGMFSK 221 Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 +I + W L N G ++ D V+ + + ++LP P Sbjct: 222 SFLISAITVTLCSLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSALPLIF 281 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S +++ VL + Sbjct: 282 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAVLTIGI 335 Query: 565 FVLALNRFLW 574 L+R ++ Sbjct: 336 IGFLLDRVMY 345 >gi|327472840|gb|EGF18267.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] Length = 574 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|327459433|gb|EGF05779.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] Length = 574 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|327459038|gb|EGF05386.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 574 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|124266584|ref|YP_001020588.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1] gi|124259359|gb|ABM94353.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1] Length = 305 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP G +G ++ I P LL + P + + + Sbjct: 117 SLERVALGFGLAALVGIPAGFVLGRFSFVNHMISPLISLLRPVSPLAWLP--IGLLVFKA 174 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP ++ + + W ++ N G P D+ VA +++ W+ I+ P + PY Sbjct: 175 ANPAAIWTIFIC--SIWPMIINTAVGVQRVPQDYLNVARVLNLSEWKVMTRILFPAVLPY 232 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 233 MLTGVRLSVGTAWLVIVAAEMLTGG 257 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F P AAI+ IF +W M + + + Sbjct: 151 PLISLLRPVSPLAWLPIGLLVFKAANP--------AAIWTIFICSIWPMIINTAVGVQRV 202 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +S+ W +VA+EM+ G Sbjct: 203 PQDYLNVARVLNLSEWKVMTRILFPAVLPYMLTGVRLSVGTAWLVIVAAEMLTGG 257 >gi|332358183|gb|EGJ36013.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] Length = 574 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|325688426|gb|EGD30444.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 574 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|307131761|ref|YP_003883777.1| Nitrate ABC transporter permease [Dickeya dadantii 3937] gi|306529290|gb|ADM99220.1| Nitrate ABC transporter, permease protein [Dickeya dadantii 3937] Length = 325 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 8/128 (6%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L + R + + PI+ +++ + L +L ++ F AE A+ + IF +W Sbjct: 157 LIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIW 208 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 M + + + IP+D V+R +LS + + +P +P ++ + +S+ W +V Sbjct: 209 PMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIV 268 Query: 209 ASEMIVVG 216 A+EM+ G Sbjct: 269 AAEMLTGG 276 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 20/210 (9%) Query: 361 WQSIGYIVNHFTYQDVLYVI--------WLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 WQ+ ++ + D YV W ++ RV + +A+++ IP G IG Sbjct: 105 WQT--WLAAQSIFADPFYVAGPNDQGIGWNVLASLERVGIGFGLAALVGIPAGFLIGRFR 162 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 +++ P LL + P + + + P S + + W ++ N G Sbjct: 163 FMAAMFNPIISLLRPVSPLAWLP--IGLLLFQRAEPAS--SWTIFICSIWPMILNTAEGV 218 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P D+ VA ++ + R I+LP + P +TG + G AW + +E+ + G Sbjct: 219 RQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG-- 276 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G+G +I + P +++ +L++ Sbjct: 277 ----IGIGFWIWNEWNNLNVPNIIIAILVI 302 >gi|260467171|ref|ZP_05813348.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gi|259029024|gb|EEW30323.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 286 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +I A ++ +PVG+ IG P + L P + PLV+ Sbjct: 95 SLGRVFAALIAAILVGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPLVIIWFGIGE 154 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L +++ M+ + + +G + A S T + R++ILP P Sbjct: 155 PSKILVITIAMLA----PVALSTASGVRGVSQERINAARSLGATHAQVVRHVILPSALPS 210 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G W+ + +E+ + T GLG I + + VV+G+L++ Sbjct: 211 ILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVVMGILVIAAI 264 Query: 566 VLALN 570 L Sbjct: 265 AFVLE 269 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 32/155 (20%), Positives = 75/155 (48%), Gaps = 10/155 (6%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTF 118 +L Q+A + R+ +A++ ++L V LA +G + P+L+ ++ IP L +L Sbjct: 87 TLAQHAVASLGRVFAALIAAILVG-VPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPL 145 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P K I I + + + S + + ++ +RS + Q Sbjct: 146 VIIWFGIGEPSK--------ILVITIAMLAPVALSTASGVRGVSQERINAARSLGATHAQ 197 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ +P ++P ++ + +++ GW +VA+E++ Sbjct: 198 VVRHVILPSALPSILTGLRIALGAGWSTLVAAELV 232 >gi|134299432|ref|YP_001112928.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] gi|134052132|gb|ABO50103.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] Length = 254 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 17/210 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ + + R+ + ++++LF F A L ++RL + P+LD + IP + + +++ Sbjct: 52 KHITISLYRVFAGFLLTVLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILILW 111 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ LA F +F + + + CN + L EV F + KF Sbjct: 112 FGIGETSKLAVIILATFFPVFLNTLNGILG------CN--KQLLEVGDVFGFTARDKFLR 163 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P ++ + + W ++ +E+I GIG I A + I+ Sbjct: 164 IVIPAALPSIIVGFRLGLGYSWRSLIGAELIAASS------GIGYMIIDAEQLSRPDIII 217 Query: 243 YAMLTMLGVIFLYDQLLFR---PMIVWSNK 269 +LT+ ++ D F+ +I W+ K Sbjct: 218 VGILTIGLFGYIIDYCFFKLTNHLIPWAGK 247 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 12/182 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++RV ++ + P+ I +G ++ I P L P P+++ ++ Sbjct: 56 ISLYRVFAGFLLTVLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILIL---WF 112 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L++ +I T + + N + G EV F T + I++P P Sbjct: 113 GIGETSKLAV-IILATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDKFLRIVIPAALP 171 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMC 563 + G G +W + I +E+ + ++G+G Y+ E+ S P++++ G+L + Sbjct: 172 SIIVGFRLGLGYSWRSLIGAELIA------ASSGIG-YMIIDAEQLSRPDIIIVGILTIG 224 Query: 564 CF 565 F Sbjct: 225 LF 226 >gi|325689416|gb|EGD31421.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 574 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|307308504|ref|ZP_07588206.1| choline ABC transporter, permease protein [Sinorhizobium meliloti BL225C] gi|307317282|ref|ZP_07596722.1| choline ABC transporter, permease protein [Sinorhizobium meliloti AK83] gi|306896871|gb|EFN27617.1| choline ABC transporter, permease protein [Sinorhizobium meliloti AK83] gi|306900904|gb|EFN31513.1| choline ABC transporter, permease protein [Sinorhizobium meliloti BL225C] Length = 281 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T +L+A +S+ + AA+ + ++ PILD+MQ+IP +L ++ Sbjct: 91 QETTETLALVLAATFVSMAVGVPFGIAAARRAWIYSIMRPILDLMQTIPTFVYLIPALIL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A I +++ + + P L E + SF + WQ Sbjct: 151 FGLGMVPGLIATVIFAIPAPIRLTRL---------GIISTPPALVEAAESFGATPWQVLR 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +PF+MP GL +M+S+S Sbjct: 202 KVELPFAMPQIMAGLTQTIMLSLS 225 >gi|73542404|ref|YP_296924.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gi|72119817|gb|AAZ62080.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 284 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 12/184 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ ++A+++ +P+GI +G + +PF PA+ F PL++ Sbjct: 93 MTVWRVLGGFVLAAVLAVPLGILMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIG 152 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+IF G+ + I+ V D E A + + + +++PG Sbjct: 153 ETQ-----KLLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGASSRGIVKRVLIPGAA 207 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 208 PEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIG 261 Query: 564 CFVL 567 C L Sbjct: 262 CIGL 265 >gi|254453930|ref|ZP_05067367.1| taurine ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198268336|gb|EDY92606.1| taurine ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 420 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 5/161 (3%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + + YQ+V + LG ++FRV+V ++ + I IP+G +G P + + Sbjct: 212 IAKYGYQNVYLTVHLG-FSLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRP 270 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P PLV+ + L+ W + +G S A S Sbjct: 271 VPPLALIPLVIIWFGIGEVGK----IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLG 326 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 + W+ R++I+P P TGA A G W + +E+ + Sbjct: 327 ASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA 367 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F IG E+ IF +F + +W M + + + Sbjct: 263 PIVEFMRPVPPLALIPLVIIWFG-------IG-EVGKIFLLFLAALWIMAIAARSGVSGV 314 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ ++ +P S+P + ++M W VVA+E++ + Sbjct: 315 RITKVHAAYSLGASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEE---- 370 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 GIG I A K Q+ IL ++ + V F D L+ R ++ W K Sbjct: 371 --GIGKMITTASKFQNTDIILLGVIIIGLVGFGIDMLMRWAERSLVPWKGK 419 >gi|302391226|ref|YP_003827046.1| binding-protein-dependent transport systems inner membrane component [Acetohalobium arabaticum DSM 5501] gi|302203303|gb|ADL11981.1| binding-protein-dependent transport systems inner membrane component [Acetohalobium arabaticum DSM 5501] Length = 275 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 18/152 (11%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT + + A VI+L L KS+ L ++ PILD MQ++P +L ++F Sbjct: 88 RTFVLVFVAAVIALALGIPTGILINKSQLLNRIITPILDFMQTMPPFVYLIPATMFF--- 144 Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G V G IFA+ + ++ ++ L +P +LEEV +F + WQ + + + Sbjct: 145 GIGNVPGVMATVIFAMPPAIRLTDL------GLKQVPDELEEVGFAFGSTPWQMLFKVRL 198 Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMI 213 P ++P G+ +M+S+S VV + MI Sbjct: 199 PLALPSIMAGINQCIMLSLS----MVVIASMI 226 >gi|284044853|ref|YP_003395193.1| binding-protein-dependent transporters inner membrane component [Conexibacter woesei DSM 14684] gi|283949074|gb|ADB51818.1| binding-protein-dependent transport systems inner membrane component [Conexibacter woesei DSM 14684] Length = 275 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 9/123 (7%) Query: 95 RLGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 +LG +V P + +++IP+ G + +++F KV+ L + ++ + Sbjct: 86 KLGDAIVDPPMQAIRTIPLFGLVPLFILWFGIGETPKVLLIALGVVIPLY--------LN 137 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +L +I +L EV+RS RL+ W++ ++ VP ++PG + S+ W ++ +E I Sbjct: 138 IVAALRSIDPELIEVARSLRLTRWERARHVIVPGALPGTLVGFRQSLGIAWLALIVAEQI 197 Query: 214 VVG 216 G Sbjct: 198 AAG 200 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 8/116 (6%) Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 LL+ G + N++A + + EVA S +T W R++I+PG P + G + Sbjct: 124 LLIALGVVIPLYLNIVAALRSIDPELIEVARSLRLTRWERARHVIVPGALPGTLVGFRQS 183 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 G AW A IV+E + G GLG I + + +V+G+L C L L Sbjct: 184 LGIAWLALIVAEQIAAG------AGLGYMINNARDFLRTDVIVVGLL--CYAALGL 231 >gi|257455631|ref|ZP_05620860.1| putative aliphatic sulfonates transport permease protein SsuC [Enhydrobacter aerosaccus SK60] gi|257446914|gb|EEV21928.1| putative aliphatic sulfonates transport permease protein SsuC [Enhydrobacter aerosaccus SK60] Length = 298 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 15/138 (10%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ +TGW ++ +ILPG P + G + Sbjct: 167 LVAVGTFFPIYLNTYHGVRNVDKHLVEMAKSYDLTGWALFKEVILPGALPSILVGVRFSL 226 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI------MCCFVLA 568 G W IV+E S TTG+G + E ++ +L+ + F+ Sbjct: 227 GIMWLTLIVAETIS------ATTGIGYLAMHAREFFQIDIIMFSILVYALLGFLADFIAK 280 Query: 569 LNRFL---WHPLYLYGTR 583 F+ WHP Y G Sbjct: 281 KLEFVWLKWHPAYQQGAH 298 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 15/131 (11%) Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++IP L + +V+F KV + F I+ + Y + N+ + Sbjct: 139 QMLRNIPHLALIPLVIVWFGIDEAAKVFLVAVGTFFPIY--------LNTYHGVRNVDKH 190 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L E+++S+ L+GW F + +P ++P ++ + S+ W ++V +T+ G Sbjct: 191 LVEMAKSYDLTGWALFKEVILPGALPSILVGVRFSLGIMWL------TLIVAETISATTG 244 Query: 225 IGSYIALAIKE 235 IG Y+A+ +E Sbjct: 245 IG-YLAMHARE 254 >gi|85704275|ref|ZP_01035378.1| putative nitrate transporter [Roseovarius sp. 217] gi|85671595|gb|EAQ26453.1| putative nitrate transporter [Roseovarius sp. 217] Length = 358 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 16/190 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN----- 449 +IA+++ +P+GI G P ++ + P Q+ + P+V VS + + Sbjct: 163 LIATVVAVPLGIAAGLSPIANAALNPLIQIFKPVSPLAWLPIVTMIVSALAASNDGVFAK 222 Query: 450 --LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + ++ + + W L N G ++ D V+ + W ++LP P Sbjct: 223 SFVISAVTVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIF 282 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG +I + + G S +++ VL + Sbjct: 283 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSSLARIMVAVLSIGI 336 Query: 565 FVLALNRFLW 574 L+R ++ Sbjct: 337 IGFLLDRVMY 346 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 60/117 (51%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL VS+ +++ W K L +P ++P + + +S+ GW Sbjct: 236 LWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMV 295 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G +I + L I+ A+L++ + FL D++++ Sbjct: 296 LIAAEMLAQN------PGLGKFIWDEFQNGSSSSLARIMVAVLSIGIIGFLLDRVMY 346 >gi|288549732|ref|ZP_05967996.2| nitrate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288318071|gb|EFC57009.1| nitrate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 256 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 101 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 152 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 153 PQDYLNVARVLQLSEWTILRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 207 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+I IP+G IG S P LL + P + + + Sbjct: 67 SLQRVAVGFGLAAIAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAWLP--IGLLLFQK 124 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ W R I+ P + P Sbjct: 125 AEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTILRRILFPAVLPA 182 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G +I + +++ ++I+ Sbjct: 183 VLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVENILIAIVIIGVV 236 Query: 566 VLALNRFL 573 L L + L Sbjct: 237 GLMLEQGL 244 >gi|152970769|ref|YP_001335878.1| putative nitrate transporter component; NasE [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895282|ref|YP_002920017.1| nitrate transporter component [Klebsiella pneumoniae NTUH-K2044] gi|330009851|ref|ZP_08306609.1| nitrate ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150955618|gb|ABR77648.1| putative nitrate transporter component; NasE [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547599|dbj|BAH63950.1| nitrate transporter component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328534712|gb|EGF61275.1| nitrate ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 294 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 139 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 190 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 191 PQDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%) Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 YQD + + W ++ RV V +A++ IP+G IG + P LL Sbjct: 89 YQDGPNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVS 148 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + P + + + P S + + W ++ N G P D+ VA ++ Sbjct: 149 PLAWLP--IGLLLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLS 204 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 W R I+ P + P +TG + G AW + +E+ + G Sbjct: 205 EWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245 >gi|324990295|gb|EGC22233.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 574 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|91776523|ref|YP_546279.1| nitrate transport permease [Methylobacillus flagellatus KT] gi|91710510|gb|ABE50438.1| nitrate transport permease [Methylobacillus flagellatus KT] Length = 272 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 7/124 (5%) Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + IF IF +W M + + N+ ++ V+R+ + +K + + +P + P +V M Sbjct: 145 SGIFVIFICSLWPMLMNTAFGVANVRKEWLNVARTLEVGQLRKAFCVILPAAAPTIVTGM 204 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +SM W +VA+EM+V G GIG ++ L +++A+L M+GV+ + Sbjct: 205 RISMGIAWLVIVAAEMLVGGT------GIGYFVWNQWNNLSLANVIFAIL-MIGVVGMVL 257 Query: 257 QLLF 260 + F Sbjct: 258 DMCF 261 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP G IG P + PF Q+L + P ++ Y Sbjct: 84 SLGRVAVGFSMAALVAIPFGFLIGMSPLAFKVLDPFIQILKPISPLAWMP-----IALYT 138 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + +IF + W +L N G + ++ VA + + R +ILP P Sbjct: 139 IKDSTASGIFVIFICSLWPMLMNTAFGVANVRKEWLNVARTLEVGQLRKAFCVILPAAAP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 VTG + G AW + +E+ G TG+G ++ S V+ +L++ Sbjct: 199 TIVTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNQWNNLSLANVIFAILMIGV 252 Query: 565 FVLALN 570 + L+ Sbjct: 253 VGMVLD 258 >gi|90418329|ref|ZP_01226241.1| permease protein ABC-type glycine/betaine/proline transporter [Aurantimonas manganoxydans SI85-9A1] gi|90338001|gb|EAS51652.1| permease protein ABC-type glycine/betaine/proline transporter [Aurantimonas manganoxydans SI85-9A1] Length = 282 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + T +L++ + +L AA+ L +L PILD+MQ+IP +L ++ Sbjct: 93 EETTETLALVLASTAVCMLIGVPVGVAAARREWLYAILRPILDLMQTIPTFVYLIPALIL 152 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + L PG V A I +++ + + PR L E +F + Q+ Sbjct: 153 FGLGLVPGLVATVIFALPSPIRLTRL---------GIASTPRQLLEAGDAFGATPMQRLM 203 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 204 TIEIPYALPQIMAGLTQTIMLSLS 227 >gi|221069138|ref|ZP_03545243.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|220714161|gb|EED69529.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] Length = 330 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG +S P LL + P + + + Sbjct: 139 SLQRVALGFGLAALVGIPLGFVIGRFSFLSRMFNPLISLLRPVSPLAWLP--IGLLVFKG 196 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 NP ++ IF + W ++ N G P D+ VA +++ W+ I+ P + P Sbjct: 197 ANP---AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPAVLP 253 Query: 505 YYVTGAITACGGAWNASIVSEVASWG 530 Y +TG A G AW + +E+ + G Sbjct: 254 YMLTGVRLAVGTAWLVIVAAEMLTGG 279 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F GA AAI+ IF +W M + + + Sbjct: 173 PLISLLRPVSPLAWLPIGLLVFK--------GANPAAIWTIFICSIWPMVINTAVGVQRV 224 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS W+ + P +P ++ + +++ W +VA+EM+ G Sbjct: 225 PQDYMNVARVLNLSEWKIATTILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG 279 >gi|170078356|ref|YP_001734994.1| nitrate transport protein nrtB like protein [Synechococcus sp. PCC 7002] gi|169886025|gb|ACA99738.1| nitrate transport protein nrtB like protein [Synechococcus sp. PCC 7002] Length = 276 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 34/212 (16%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +D++Y ++ RV+ +A II IP+GI +G I + +P ++ PA F Sbjct: 81 KDIIY-------SVLRVLTGFSLAVIISIPLGILMGAFASIRALCEPIIGIVRYMPAPAF 133 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL+ V Y+ + + LL+ GT ++ ++ P + E +++ + G R Sbjct: 134 IPLL---VLYFGVG-EIPKVLLIFIGTLFFNTLMIMDAVKFVPKELIE--ATYTLGGNR- 186 Query: 494 WRYIILPGIFPYYVTGAITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 I++ IFPY + I A +WN IVSE+ + T GLG I+ + Sbjct: 187 -PQIVIKVIFPYILPKIIDAGRVNIAASWNLVIVSELVA------ATEGLGRRISVAQRF 239 Query: 550 GSFPEV--------VLGVLIMCCFVLALNRFL 573 + ++ ++G+LI CF+ L RFL Sbjct: 240 LNTDQIFAGLIVIGLIGLLIDLCFIW-LQRFL 270 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 40/203 (19%), Positives = 93/203 (45%), Gaps = 19/203 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + LR+L+ ++++ + L + + PI+ I++ +P F+ V+YF Sbjct: 86 SVLRVLTGFSLAVIISIPLGILMGAFASIRALCEPIIGIVRYMPAPAFIPLLVLYFGV-- 143 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E+ + IF ++ T + ++ +P++L E + + + Q + P+ Sbjct: 144 ------GEIPKVLLIFIGTLFFNTLMIMDAVKFVPKELIEATYTLGGNRPQIVIKVIFPY 197 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ ++++ W V+ SE++ + G+G I++A + + I +A L Sbjct: 198 ILPKIIDAGRVNIAASWNLVIVSELVAATE------GLGRRISVAQRFLNTDQI-FAGLI 250 Query: 248 MLGVIFLYDQLLFRPMIVWSNKF 270 ++G+I L L F +W +F Sbjct: 251 VIGLIGLLIDLCF----IWLQRF 269 >gi|33860929|ref|NP_892490.1| putative cyanate ABC transporter [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639661|emb|CAE18830.1| putative cyanate ABC transporter [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 260 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 13/189 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV++ +A ++ IP+G+ +G S + P+ QLL PL V + Sbjct: 72 ISLRRVLIGYSLAVLVAIPLGVLMGMSKLAQSSLNPYVQLLKPVS-----PLAWLPVGLF 126 Query: 445 HLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + +IF T W L N G ++ D+ V+ S + R +ILP I Sbjct: 127 VFRNSEITGIFVIFITSIWPTLINTAFGVASINPDYLRVSKSLGASKSITIRRVILPAIM 186 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G + G AW + +E+ L TG+G +I S + + ++I+ Sbjct: 187 PNILAGMRISMGTAWLVIVAAEM-------LLGTGIGYFIWNEWNNLSLENIFVAIIIIG 239 Query: 564 CFVLALNRF 572 L++F Sbjct: 240 FTGFILDQF 248 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L +++L L S+ L P + +++ + L +L + F N Sbjct: 76 RVLIGYSLAVLVAIPLGVLMGMSKLAQSSLNPYVQLLKPVSPLAWLPVGLFVFRN----- 130 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +E+ IF IF + +W + + +I D VS+S S + +P MP Sbjct: 131 ---SEITGIFVIFITSIWPTLINTAFGVASINPDYLRVSKSLGASKSITIRRVILPAIMP 187 Query: 191 GLVWNMMMSMSGGWFFVVASEMIV 214 ++ M +SM W +VA+EM++ Sbjct: 188 NILAGMRISMGTAWLVIVAAEMLL 211 >gi|308177618|ref|YP_003917024.1| aliphatic sulfonates ABC transporter inner membrane subunit [Arthrobacter arilaitensis Re117] gi|307745081|emb|CBT76053.1| putative aliphatic sulfonates ABC transporter, inner membrane subunit [Arthrobacter arilaitensis Re117] Length = 285 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P + +P L SL + R LS VI++L A L A L + P++ Sbjct: 59 PVAVAGKLPELLADGSLVSAVGTSLFRALSGFVIAVLIATPIALLLAHQPLLRQGVGPLV 118 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPR 163 MQ +P + ++ ++ F G A I+ + + ++ + + IP Sbjct: 119 SAMQVLPSIAWVPAAIILF---------GLSDATIYTVLLLGAIPSIINGLLSGIDMIPT 169 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 + +S+ S + ++ +P ++PG V + + W ++A+E+I VG ++ Sbjct: 170 QYKALSKVLGASKREHILHIELPAALPGYVAGLRQGWAFAWRSLMAAELIAVGGSLA--L 227 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 G+GS + DL ++ +LT+L V L + L F P+ Sbjct: 228 GVGSLLQRGRDLADLPLVMLVILTILLVGVLIELLFFAPI 267 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 16/197 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FR + +IA +I P+ + + +P + + P + P+ + P + + + Sbjct: 82 SLFRALSGFVIAVLIATPIALLLAHQPLLRQGVGPLVSAMQVLPSIAWVP---AAIILFG 138 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ + + +++ G I+ +++G P +K ++ + +I LP P Sbjct: 139 LS-DATIYTVLLLGAIPSIINGLLSGIDMIPTQYKALSKVLGASKREHILHIELPAALPG 197 Query: 506 YVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVL------- 557 YV G AW + + +E +A G + L G+G+ + + P V+L Sbjct: 198 YVAGLRQGWAFAWRSLMAAELIAVGGSLAL---GVGSLLQRGRDLADLPLVMLVILTILL 254 Query: 558 -GVLIMCCFVLALNRFL 573 GVLI F + R L Sbjct: 255 VGVLIELLFFAPIERKL 271 >gi|294676451|ref|YP_003577066.1| glycine betaine/L-proline ABC transporter permease ProW [Rhodobacter capsulatus SB 1003] gi|294475271|gb|ADE84659.1| glycine betaine/L-proline ABC transporter, permease protein ProW-1 [Rhodobacter capsulatus SB 1003] Length = 338 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 14/135 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 ++SA V+ + AA RL + + PILD+MQ++P +L +V+F + + PG Sbjct: 160 VISACVVCMSLGVPIGIAAAHRPRLYLAMQPILDLMQTLPTFVYLIPAIVFFGIGMVPGL 219 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + A + + + + +T + + P+ L E +R+F + Q W + +P+++P Sbjct: 220 I-----ATVIFVLPAPI-RLT---HLGVSTTPQPLLEAARAFGATPRQVLWKVELPYALP 270 Query: 191 ----GLVWNMMMSMS 201 GL +M+S+S Sbjct: 271 QIMAGLNQTIMLSLS 285 >gi|33596045|ref|NP_883688.1| permease component of ABC transporter [Bordetella parapertussis 12822] gi|33601437|ref|NP_888997.1| permease component of ABC transporter [Bordetella bronchiseptica RB50] gi|33573048|emb|CAE36690.1| permease component of ABC transporter [Bordetella parapertussis] gi|33575873|emb|CAE32951.1| permease component of ABC transporter [Bordetella bronchiseptica RB50] Length = 255 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 10/182 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV V + + +++ +PVG +G+ + S I P A P PLV + Y+ + Sbjct: 66 RVFVGVCLGTLLAVPVGFVLGWYRGVRSFIDPVINFFRALPPIALIPLV---IVYFGIGE 122 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 +++L + + + + + G S F VA + T +R +I+P P+ +T Sbjct: 123 TAKIAILF-YASFFAGVIVMYEGISQINPIFVRVAKTLGATDGEIFRKVIVPLTIPHMLT 181 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 A G AW + SE+ + GLGA I +++ + +G++ + LA Sbjct: 182 ALRVALGVAWATLVASELIA------AQQGLGALIQDASSFFQLDIIYVGIICIGFIALA 235 Query: 569 LN 570 ++ Sbjct: 236 MD 237 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ +++P + + +VYF IG E A I +F + + MY+ + I Sbjct: 97 PVINFFRALPPIALIPLVIVYFG-------IG-ETAKIAILFYASFFAGVIVMYEGISQI 148 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 V+++ + + F + VP ++P ++ + +++ W +VASE+I Sbjct: 149 NPIFVRVAKTLGATDGEIFRKVIVPLTIPHMLTALRVALGVAWATLVASELI 200 >gi|121607385|ref|YP_995192.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121552025|gb|ABM56174.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 266 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 22/200 (11%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + T ML +++ LF + T S + P L+ ++ +P L + F Sbjct: 72 FTQATVGHMLQGWLLASLFGVLLGTAIGVSPVARAWVQPTLEFIRPLPASALLPLALSIF 131 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 L G V+ F + +W + + L + L EV+R ++S + W + Sbjct: 132 -GLNRGTVL-------FVVAFGAMWPVLLATVHGLATLEPRLSEVARCLQMSRGAQVWKM 183 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI---ALAIKEQDLLA 240 G+P +MP ++ M ++++ VA + VVG+ + G+G I A A + D Sbjct: 184 GLPNAMPDILAGMRLALT------VALIVAVVGEMIAAQSGLGQAILLAARAFRASD--- 234 Query: 241 ILYAMLTMLGVI-FLYDQLL 259 L+A + +LG I F+ + LL Sbjct: 235 -LFAGIALLGGIGFVSNALL 253 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++AS+ + +G IG P + +QP + + PA+ PL +S + LN L Sbjct: 85 LLASLFGVLLGTAIGVSPVARAWVQPTLEFIRPLPASALLPL---ALSIFGLNRGTVL-F 140 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWRYIILPGIFPYYVTG 509 ++ FG W +L + G + EVA ++ G + W+ + LP P + G Sbjct: 141 VVAFGAMWPVLLATVHGLATLEPRLSEVARCLQMSRGAQVWK-MGLPNAMPDILAG 195 >gi|116629363|ref|YP_814535.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus gasseri ATCC 33323] gi|238854212|ref|ZP_04644557.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus gasseri 202-4] gi|282850966|ref|ZP_06260340.1| ABC transporter, substrate-binding protein, QAT family [Lactobacillus gasseri 224-1] gi|311110982|ref|ZP_07712379.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Lactobacillus gasseri MV-22] gi|116094945|gb|ABJ60097.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus gasseri ATCC 33323] gi|238833148|gb|EEQ25440.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus gasseri 202-4] gi|282557918|gb|EFB63506.1| ABC transporter, substrate-binding protein, QAT family [Lactobacillus gasseri 224-1] gi|311066136|gb|EFQ46476.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Lactobacillus gasseri MV-22] Length = 516 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 12/119 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L AMVI++ F+ +++ + I I+Q+IP L L + + + Sbjct: 31 LLIAMVIAIPLAFILKG----HKKVAEFTLQIAGIIQTIPSLAILGLLLPFVGIGTTPAI 86 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 I L AI IF + Y L +IP +LEE + +F L+ W+K L +P +MP Sbjct: 87 IALVLYAIMPIFQN--------TYSGLTDIPDNLEEAATAFGLTKWKKLQRLEIPMAMP 137 >gi|251798477|ref|YP_003013208.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247546103|gb|ACT03122.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length = 278 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 18/156 (11%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++A T +L+A ++S++ L A+S L ++ P+LD+MQ++P +L V + Sbjct: 88 EHAMETLSIVLTASLLSIIIGVPTGILCARSSFLQGIITPLLDLMQTMPAFVYLLPAVSF 147 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F G V G + IFA+ T ++ N+ + +P +L E + +F + QK + Sbjct: 148 F---SLGVVPGVIASIIFAVPPTIRLTNL------GIRQVPVELVEAADAFGSTPNQKLF 198 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMI 213 L +P ++P G+ +M+S+S VV S MI Sbjct: 199 KLQLPMALPTMMAGINQTIMLSLS----MVVISSMI 230 >gi|124382344|ref|YP_001025815.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|238563141|ref|ZP_00439365.2| taurine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|251767713|ref|ZP_02268181.2| taurine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254176599|ref|ZP_04883257.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254201032|ref|ZP_04907397.1| taurine ABC transporter, permease protein [Burkholderia mallei FMH] gi|254204997|ref|ZP_04911350.1| taurine ABC transporter, permease protein [Burkholderia mallei JHU] gi|254359116|ref|ZP_04975388.1| taurine ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|147748644|gb|EDK55719.1| taurine ABC transporter, permease protein [Burkholderia mallei FMH] gi|147754583|gb|EDK61647.1| taurine ABC transporter, permease protein [Burkholderia mallei JHU] gi|148028303|gb|EDK86263.1| taurine ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|160697641|gb|EDP87611.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|238521308|gb|EEP84761.1| taurine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|243061954|gb|EES44140.1| taurine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|261826754|gb|ABM99472.2| taurine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] Length = 285 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 95 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 154 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 155 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 209 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 210 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 263 Query: 565 FVLALN 570 LAL Sbjct: 264 IALALE 269 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 84 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 143 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 144 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 195 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 196 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 232 >gi|13022190|gb|AAK11681.1|AF342826_2 putative ABC transporter permease [Enterobacter cloacae] Length = 268 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 12/202 (5%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + LY+ W+ +M RV +A ++ IP G+ IG + + P QLL P Sbjct: 63 AFSGTLYIHWIK--SMSRVYGAFALAVLLAIPTGLLIGKNALVRRLVDPTLQLLRPVPVT 120 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + PL + ++ + PN + L+ G + I N G + E A+ G Sbjct: 121 AWLPL---SMIFFGVGPNAAI-FLVCLGAFFPIAINTAFGVKSVEPRLFEAAAMLGCKGP 176 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +R ++LP P G AW +V E+ GLGA I + Sbjct: 177 SMFRQVVLPAAMPSIFNGLRMGHAIAWFLIVVGEMTG------VPEGLGAAIMDGRMLSR 230 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 V+ G++++ +R L Sbjct: 231 TDVVIAGMVVIGLTGFITDRLL 252 >gi|283785488|ref|YP_003365353.1| nitrate transporter permease component [Citrobacter rodentium ICC168] gi|282948942|emb|CBG88545.1| nitrate transporter permease component [Citrobacter rodentium ICC168] Length = 291 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 136 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 187 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 188 PADYLNVARVLQLSEWTVMRRILFPAVLPAILTGIRLSVGIAWLVIVAAEMLTGG 242 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 18/198 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A+++ IP+G G S P LL + P + + + Sbjct: 102 SLQRVATGFGLAALVGIPLGFLTGRFTFFSRMFSPLIALLRPVSPLAWLP--IGLLLFQK 159 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ W R I+ P + P Sbjct: 160 AEPAS--SWTIFICSIWPMVINTAEGVRRIPADYLNVARVLQLSEWTVMRRILFPAVLPA 217 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VL 557 +TG + G AW + +E+ + G G+G +I + + V+ Sbjct: 218 ILTGIRLSVGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIVIIGVV 271 Query: 558 GVLIMCCFVLALNRFLWH 575 G+L+ +LA RF W Sbjct: 272 GLLLEQGLMLAARRFSWQ 289 >gi|162451030|ref|YP_001613397.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161161612|emb|CAN92917.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 307 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 8/170 (4%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P D++ L Q+ + R+L+ + V L +SR L+P Sbjct: 88 APTDVLAAARELFASQKLWQHLGNSVFRVLAGFAAAGATGVVLGLLIGRSRLAEDTLLPP 147 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L+I++ IP + +L ++ F + AEL+ IF + ++ + + + + Sbjct: 148 LEILRPIPGVAWLPLAILMFPS--------AELSMIFITYMGALFPILIATIHGVGALDP 199 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L SRS + F + +P ++P +V M + M WF +V +EMI Sbjct: 200 RLIASSRSLGARPLRLFLEVVLPGALPSIVTGMSIGMGTSWFCLVTAEMI 249 >gi|146311970|ref|YP_001177044.1| nitrate ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145318846|gb|ABP60993.1| nitrate ABC transporter, inner membrane subunit [Enterobacter sp. 638] Length = 293 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 138 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 189 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 190 PQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 244 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 18/198 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+I+ IP+G IG S P LL + P + + + Sbjct: 104 SLQRVAIGFGLAAIVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAWLP--IGLLLFQK 161 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ W R I+ P + P Sbjct: 162 AEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTIMRRILFPAVLPA 219 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VL 557 +TG + G AW + +E+ + G G+G +I + + V+ Sbjct: 220 VLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVENILIAIVIIGVV 273 Query: 558 GVLIMCCFVLALNRFLWH 575 G+L+ +L RF W Sbjct: 274 GLLLEQGLMLIARRFSWQ 291 >gi|227822905|ref|YP_002826877.1| proline/glycine betaine ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227341906|gb|ACP26124.1| proline/glycine betaine ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 281 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T +L+A +S+ +AA+ + ++ PILD+MQ+IP +L ++ Sbjct: 91 QETTETLALVLAASFVSMAVGVPLGIVAARRAWVYSIMRPILDLMQTIPTFVYLIPALIL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A I +++ + + P L E + SF + WQ Sbjct: 151 FGLGMVPGLIATVIFAIPAPIRLTRL---------GIISTPPSLVEAAESFGATPWQVLR 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +PF+MP GL +M+S+S Sbjct: 202 KVEIPFAMPQIMAGLTQTIMLSLS 225 >gi|323174961|gb|EFZ60576.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli LT-68] Length = 263 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|42519465|ref|NP_965395.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41583753|gb|AAS09361.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|329667013|gb|AEB92961.1| ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 515 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 14/130 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L AMVI++ F+ ++ + I I+Q+IP L L + + + P Sbjct: 31 LLIAMVIAIPLAFILKG----HKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPA- 85 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 VI L AI IF + Y L IP +LEE + +F L+ W+K L +P +MP Sbjct: 86 VIALVLYAIMPIFQN--------TYSGLTEIPENLEEAATAFGLTKWKKLQRLEIPMAMP 137 Query: 191 GLVWNMMMSM 200 +V + +++ Sbjct: 138 MIVAGIRIAL 147 >gi|160940742|ref|ZP_02088084.1| hypothetical protein CLOBOL_05636 [Clostridium bolteae ATCC BAA-613] gi|158436262|gb|EDP14029.1| hypothetical protein CLOBOL_05636 [Clostridium bolteae ATCC BAA-613] Length = 249 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 13/155 (8%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +R +L L A +S+L +LA + +L P++ +++S+P+ F+ +++ Sbjct: 65 ARISLGFLGAFALSILL----GSLAYLFPLVKELLDPVMLLIKSVPVASFVILALIW--- 117 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 IG+ A+F F V + S L + + L E++R FR+ W++ Y+ V Sbjct: 118 ------IGSRNLAVFTSFLVVVPMVYVSTLSGLKHTDKKLLEMARVFRMPMWKRIHYIYV 171 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 P +P LV ++ W VA+E+I + + I Sbjct: 172 PALLPYLVNGCRTALGMSWKSGVAAEVIGIPEGSI 206 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 + ++G E+A F + W+ YI +P + PY V G TA G +W + + +EV Sbjct: 139 STLSGLKHTDKKLLEMARVFRMPMWKRIHYIYVPALLPYLVNGCRTALGMSWKSGVAAEV 198 >gi|255327602|ref|ZP_05368668.1| putative aliphatic sulfonates transport permease protein SsuC [Rothia mucilaginosa ATCC 25296] gi|255295276|gb|EET74627.1| putative aliphatic sulfonates transport permease protein SsuC [Rothia mucilaginosa ATCC 25296] Length = 280 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/154 (20%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L ++ + +T R+L I + V L S + ++ P + ++++P L ++ Sbjct: 81 ELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIAAPTIGALRAVPSLAWVPLL 140 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ KV + A F ++T+ + +L ++ L E +R+F L G + Sbjct: 141 LLWIGIGENSKVTLVAIGAFFPVYTT--------VSAALAHVDPKLVEAARAFGLKGLRL 192 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 F + +P +P +V + ++++ W F+VA+E++ Sbjct: 193 FTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELL 226 >gi|167915554|ref|ZP_02502645.1| permease component of taurine ABC transporter [Burkholderia pseudomallei 112] Length = 247 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 57 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 116 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 117 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 171 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 172 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 225 Query: 565 FVLALN 570 LAL Sbjct: 226 IALALE 231 Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 46 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 105 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 106 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 157 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 158 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 194 >gi|53716257|ref|YP_106163.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|52422227|gb|AAU45797.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC 23344] Length = 253 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 63 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 122 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 123 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 177 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 178 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 231 Query: 565 FVLALN 570 LAL Sbjct: 232 IALALE 237 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 52 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 111 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 112 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 163 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 164 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 200 >gi|295095647|emb|CBK84737.1| nitrate ABC transporter, permease protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 292 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 137 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 188 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 189 PQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 243 Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust. Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 18/203 (8%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A++ IP+G IG S P LL + P + Sbjct: 98 WNVLASLQRVAIGFGLAAMAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAWLP--IGL 155 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + P S + + W ++ N G P D+ VA ++ W R I+ P Sbjct: 156 LLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTIMRRILFP 213 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV----- 555 + P +TG + G AW + +E+ + G G+G +I + + Sbjct: 214 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 267 Query: 556 ---VLGVLIMCCFVLALNRFLWH 575 V+G+L+ +L RF W Sbjct: 268 IIGVVGLLLEQGLMLIARRFSWQ 290 >gi|83309635|ref|YP_419899.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Magnetospirillum magneticum AMB-1] gi|82944476|dbj|BAE49340.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Magnetospirillum magneticum AMB-1] Length = 368 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 16/202 (7%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV--VSCVSYYHLNPNLWL 452 ++A+I+ +P+G+ G I++ + P Q+ + P+V V SY P Sbjct: 173 VLATIVAVPLGVMCGLSKTINAALNPLIQIFKPVSPLAWLPIVTMVVSASYTSAEPMFEK 232 Query: 453 SLL-----MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + L + + W L N G ++ D V ++ R +++P P+ Sbjct: 233 AFLNSAITVTLCSLWTTLINTAIGVASIDKDLMNVGRVLNLPMRTTIRKLVMPSSLPFIF 292 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S ++++ VL + Sbjct: 293 TGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGL 346 Query: 565 FVLALNRFLWHPLYLYGTRCLR 586 L+R + L+ R Sbjct: 347 IGFLLDRVMLACQALFSHSATR 368 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 20/207 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFT 119 T L ++ + ++ FV AT+ A S+ + L P++ I + + L +L Sbjct: 156 TYLDQIATSLKTVFMGFVLATIVAVPLGVMCGLSKTINAALNPLIQIFKPVSPLAWLPIV 215 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFT---SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + Y E A + + T +W + + +I +DL V R L Sbjct: 216 TMVVSASYTSAEPMFEKAFLNSAITVTLCSLWTTLINTAIGVASIDKDLMNVGRVLNLPM 275 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE- 235 L +P S+P + M +S+ GW ++A+EM+ PG+G ++ + Sbjct: 276 RTTIRKLVMPSSLPFIFTGMRLSLGVGWMVLIAAEMLAQN------PGLGKFVWDEFQNG 329 Query: 236 --QDLLAILYAMLTMLGVIFLYDQLLF 260 Q L I+ A+LT+ + FL D+++ Sbjct: 330 SSQSLAKIMVAVLTIGLIGFLLDRVML 356 >gi|291459257|ref|ZP_06598647.1| binding-protein-dependent transport system inner membrane component [Oribacterium sp. oral taxon 078 str. F0262] gi|291418511|gb|EFE92230.1| binding-protein-dependent transport system inner membrane component [Oribacterium sp. oral taxon 078 str. F0262] Length = 352 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 14/168 (8%) Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQW 462 GI G+ I+ I+PF +LL A P+ + P+V+ L+ +L+ + I G + Sbjct: 177 GIACGYNQRINYWIEPFMKLLGAIPSTTWIPIVLV------LSASLFRGSVFIIALGVWF 230 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I + I G + E A + +G + + + +P P G I A A A + Sbjct: 231 SITLSTITGIRNIDKSYYEAARTLGASGVQLIKNVAIPSAVPSIFQGMIQAMSSACTALL 290 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 V+E+ +GLG YI + ++ ++++C + +N Sbjct: 291 VAEMIG------VESGLGWYITWQKSWAEYGKMYGAIILICLIFVGVN 332 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 14/150 (9%) Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 LL V ++R+ + P + ++ +IP ++ +V +L+ G V L Sbjct: 170 LLAGLVSGIACGYNQRINYWIEPFMKLLGAIPSTTWIPIVLVLSASLFRGSVFIIALGVW 229 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F+I T S + NI + E +R+ SG Q + +P ++P + M+ + Sbjct: 230 FSI--------TLSTITGIRNIDKSYYEAARTLGASGVQLIKNVAIPSAVPSIFQGMIQA 281 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 MS ++ +EMI V G+G YI Sbjct: 282 MSSACTALLVAEMIGVES------GLGWYI 305 >gi|254449744|ref|ZP_05063181.1| glycine betaine/L-proline transport system permease protein [Octadecabacter antarcticus 238] gi|198264150|gb|EDY88420.1| glycine betaine/L-proline transport system permease protein [Octadecabacter antarcticus 238] Length = 447 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 9/164 (5%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS-----IIWIPVG 405 VV V I +A++ G V FT + Y+ ++G + + V +I A II IP+G Sbjct: 219 VVMFVIIVMAYRLAGPRVAIFTAASLAYLAFMGLWELSMITVALIGAGAFLCIIIGIPLG 278 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW G P + +P + PA V+ + ++++ + +IF I Sbjct: 279 IWFGKSPRAYNIAEPILDFMQTMPAFVYL---IPIIAFFGTGKPPGVLATLIFAMPPVIR 335 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + G P KE A++F + W+ + LP P +TG Sbjct: 336 LTAL-GMRGVPETTKEAATAFGCSPWQLLTNVELPLALPSIMTG 378 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 23/148 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 KS R + PILD MQ++P +L + +F P V+ + A+ + M Sbjct: 282 GKSPRAYNIAEPILDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLIFAMPPVIRLTALGM 341 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 +P +E + +F S WQ + +P ++P G+ ++MS+S Sbjct: 342 R--------GVPETTKEAATAFGCSPWQLLTNVELPLALPSIMTGINQTILMSLS----- 388 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIK 234 M+V+ ++I G+G+ I A++ Sbjct: 389 -----MVVIA-SLIGAEGLGALILEALQ 410 >gi|209918186|ref|YP_002292270.1| alkanesulfonate transporter permease subunit [Escherichia coli SE11] gi|209911445|dbj|BAG76519.1| sulfonate ABC transporter permease component [Escherichia coli SE11] Length = 263 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|20088963|ref|NP_615038.1| sulfonate ABC transporter, permease protein [Methanosarcina acetivorans C2A] gi|19913811|gb|AAM03518.1| sulfonate ABC transporter, permease protein [Methanosarcina acetivorans C2A] Length = 262 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 9/117 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++I++ IP L ++ F +V+F + AA F +F ++ + + Y N+ Sbjct: 100 PIIEILRPIPPLAWIPFAIVWFGLTHQ--------AAGFVVFVGMIFPIIINTYTGFKNV 151 Query: 162 PRDLEEVSRSFRLS-GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 PR E ++ + ++ +P +MP + + ++M GW +VA+EM V + Sbjct: 152 PRVYVEAAKVLGCTRNIDLIRFVAIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSN 208 >gi|45358430|ref|NP_987987.1| binding-protein dependent transport system inner membrane protein [Methanococcus maripaludis S2] gi|44921188|emb|CAF30423.1| ABC-type proline/glycine betaine transport system, permease component related protein [Methanococcus maripaludis S2] Length = 277 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 17/184 (9%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ++++ +I+LL + A+S+ + +L P+LD+MQ++P L +L V++F G+V Sbjct: 97 IITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYLIPAVLFF---GIGEV 153 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 G IFA+ +T + + N +L EV R+F + WQ + +P ++P Sbjct: 154 PGVIATVIFAM--PPAIKLTALGIEQVSN---ELIEVGRAFGGTSWQILTKIELPTAVPS 208 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTML 249 ++ + ++ + VV + I G G+G I I+ L L A +T L Sbjct: 209 IMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFL 261 Query: 250 GVIF 253 VIF Sbjct: 262 AVIF 265 >gi|313890394|ref|ZP_07824025.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus pseudoporcinus SPIN 20026] gi|313121237|gb|EFR44345.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus pseudoporcinus SPIN 20026] Length = 575 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS++ AKS + ++ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISIIIGIPLGIWMAKSTTVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 GA + IFA+ T + N+ S NI +L E S +F + QK + +P + Sbjct: 158 PGAFASVIFALPPTVRFTNLGIS------NISTELVEASDAFGSTPRQKLLKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADV 252 >gi|298292114|ref|YP_003694053.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296928625|gb|ADH89434.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 284 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 33/182 (18%) Query: 67 RTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 R T++ L +++S LF AA S+R V+ P LD+MQ++P +L + + Sbjct: 89 RATMQSLVLVLVSTLFALAIGIPIGIGAALSKRFWRVVAPALDMMQTMPSFVYLIPAIPF 148 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI---PRDLEEVSRSFRLSGWQK 179 F L A+ A F + V+ M ++ + I P L E + +F S WQK Sbjct: 149 F-----------GLGAVSACFATIVFAMPPTIRLTALGILETPSQLVEAADAFGSSRWQK 197 Query: 180 FWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P ++P G+ +M+++S VV + MI G G+G + AI+ Sbjct: 198 LFKVQLPLAIPTIMAGINQTIMLALS----MVVIAAMIGAG-------GLGGEVWKAIQR 246 Query: 236 QD 237 + Sbjct: 247 LE 248 >gi|108804393|ref|YP_644330.1| binding-protein-dependent transport systems inner membrane component [Rubrobacter xylanophilus DSM 9941] gi|108765636|gb|ABG04518.1| binding-protein-dependent transport systems inner membrane component [Rubrobacter xylanophilus DSM 9941] Length = 288 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 12/134 (8%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++A ++L+ +AAKSR + VL P+LD MQ++P +L +V Sbjct: 101 VIAATAVALVVGIPLGIVAAKSRDVETVLRPVLDFMQTMPAFVYLVPAIVLLG------- 153 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 +GA A + + + + +M L + ++ E + +F +GWQ + +P +MP Sbjct: 154 LGAAPALVAVVIFAMPPAVRLTML-GLQQVSKETVEAASAFGATGWQTLRKVELPLAMPT 212 Query: 191 ---GLVWNMMMSMS 201 G+ +M+S+S Sbjct: 213 IMAGVNQVIMLSLS 226 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 4/125 (3%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ V+ +A ++ IP+GI + + ++P + PA V+ V + Sbjct: 96 LTLALVIAATAVALVVGIPLGIVAAKSRDVETVLRPVLDFMQTMPAFVYL---VPAIVLL 152 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L ++IF + ++ G + E AS+F TGW+ R + LP P Sbjct: 153 GLGAAPALVAVVIFAMPPAVRLTML-GLQQVSKETVEAASAFGATGWQTLRKVELPLAMP 211 Query: 505 YYVTG 509 + G Sbjct: 212 TIMAG 216 >gi|293414214|ref|ZP_06656863.1| ssuC [Escherichia coli B185] gi|291434272|gb|EFF07245.1| ssuC [Escherichia coli B185] Length = 264 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|261251605|ref|ZP_05944179.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio orientalis CIP 102891] gi|260938478|gb|EEX94466.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio orientalis CIP 102891] Length = 299 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 29/179 (16%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS + + L + V A+S R+ V+ P+LD+MQ++P +L V Sbjct: 101 EDTMRTLSIITVCTLLSIVLGIPIGIAMARSNRVQSVVTPMLDVMQTMPAFVYLIPVV-- 158 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + + +++ E S +F S Q+ + Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEASTAFGASAKQRLF 211 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P +MP G+ +MMS+S M+V+ ++I + G+G + AI Q Sbjct: 212 GVQLPLAMPTIMAGINQTIMMSLS----------MVVIA-SMIGVKGLGQPVLKAITNQ 259 >gi|237731765|ref|ZP_04562246.1| nitrate ABC transporter [Citrobacter sp. 30_2] gi|226907304|gb|EEH93222.1| nitrate ABC transporter [Citrobacter sp. 30_2] Length = 291 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 136 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 187 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 188 PDDYLNVARVLQLSEWTVMRRILFPAVLPAILTGVRLSIGIAWLVIVAAEMLTGG 242 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP+G IG S P LL + P + + + Sbjct: 102 SLQRVAIGFGLAALVGIPLGFLIGRFTFFSHMFSPLIALLRPVSPLAWLP--IGLLLFQK 159 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P+D+ VA ++ W R I+ P + P Sbjct: 160 AEPAS--SWTIFICSIWPMVINTAEGVRRIPDDYLNVARVLQLSEWTVMRRILFPAVLPA 217 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ + G G+G +I + +++ ++I+ Sbjct: 218 ILTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIVIIGVV 271 Query: 566 VLALNRFL 573 L L + L Sbjct: 272 GLLLEQGL 279 >gi|297521440|ref|ZP_06939826.1| alkanesulfonate transporter permease subunit [Escherichia coli OP50] Length = 246 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 84 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 135 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 136 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 189 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 190 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 245 >gi|251789284|ref|YP_003004005.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] gi|247537905|gb|ACT06526.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] Length = 263 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 21/193 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ S +T R L+ I + SR +L + +++++P L + +++ Sbjct: 60 QHLSISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + Y + NI L E++RS+ LSG++ F Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIRNIDGGLLEMARSYGLSGFRLFRE 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + S+ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VVLPGALPSIMVGVRFSLGLMWL------TLIVAETISASSGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTML 249 ILYA+L L Sbjct: 225 VVAIILYALLGKL 237 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 21/203 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R + I + + +G G + Q+L P PLV+ + Sbjct: 63 SISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G E+A S+ ++G+R +R ++LPG Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIRNIDGGLLEMARSYGLSGFRLFREVVLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G + G W IV+E S ++G+G Y+A + + +VV+ +I+ Sbjct: 179 PSIMVGVRFSLGLMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVVAIILY 231 Query: 564 CFV--------LALNR--FLWHP 576 + L L R WHP Sbjct: 232 ALLGKLADVIALTLERIWLRWHP 254 >gi|227502579|ref|ZP_03932628.1| nitrate ABC transporter permease protein [Corynebacterium accolens ATCC 49725] gi|227076741|gb|EEI14704.1| nitrate ABC transporter permease protein [Corynebacterium accolens ATCC 49725] Length = 293 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 AMVI++ F + A R P + I++ + L +L + + A Sbjct: 117 AMVIAIPLGFWLGSSATFRR----ATDPFVQILRPVSPLAWLPLGLALLRD--------A 164 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A+F I S +W + +++ I + ++ + + Q+ Y+ P ++PG++ Sbjct: 165 ENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPAALPGIIT 224 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTV 219 M S+S W +VA+EM+V G V Sbjct: 225 GMRQSLSTAWLVIVAAEMLVGGQGV 249 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 7/169 (4%) Query: 361 WQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 W I++ Y+D + + W ++ RV++ IA +I IP+G W+G Sbjct: 78 WDRAVEILSDPFYRDGPASVGIFWHMVASLRRVLIGFAIAMVIAIPLGFWLGSSATFRRA 137 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 PF Q+L + PL ++ + ++I W L N I Sbjct: 138 TDPFVQILRPVSPLAWLPLGLALLRDAENTA----VFVIILSALWPTLLNTIEAVRGIHP 193 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 +K +A++ + YI+ P P +TG + AW + +E+ Sbjct: 194 TYKNLAATLGTNRMQQLLYIVGPAALPGIITGMRQSLSTAWLVIVAAEM 242 >gi|146309344|ref|YP_001189809.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] gi|145577545|gb|ABP87077.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] Length = 276 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 8/176 (4%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 + P + + + L ++ + + LR+ + I V T SRR Sbjct: 50 HQMPAPSQVAQTLYLLAQSGELWRHLNASLLRVSAGFAIGAALAIVIGTWVGLSRRAEAY 109 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P +++IP L ++ +++ K++ L A F ++ ++ + Sbjct: 110 LEPTFQALRAIPSLAWVPLLLLWLGIDETPKIVLIALGAFFPVY--------LALLAGIR 161 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 NI R L EV R + LS + +P ++P L + ++S W F+VA+E+I Sbjct: 162 NIDRKLVEVGRLYGLSSLALVRRILLPAALPSLFTGLRGALSLSWMFLVAAELIAA 217 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 11/169 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV I + + I +G W+G + ++P Q L A P+ + PL++ + Sbjct: 78 SLLRVSAGFAIGAALAIVIGTWVGLSRRAEAYLEPTFQALRAIPSLAWVPLLLLWLGIDE 137 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + +L+ G + + ++AG EV + ++ R I+LP P Sbjct: 138 -TPKI---VLIALGAFFPVYLALLAGIRNIDRKLVEVGRLYGLSSLALVRRILLPAALPS 193 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 TG A +W + +E+ + T GLG +++ E S P+ Sbjct: 194 LFTGLRGALSLSWMFLVAAELIA------ATRGLGYLLSDGRET-SRPD 235 >gi|126447555|ref|YP_001077898.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126240409|gb|ABO03521.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] Length = 283 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 LAL Sbjct: 262 IALALE 267 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 82 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230 >gi|222080828|ref|YP_002540191.1| nitrate ABC transporter [Agrobacterium radiobacter K84] gi|221725507|gb|ACM28596.1| nitrate ABC transporter [Agrobacterium radiobacter K84] Length = 280 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 20/184 (10%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +RRL + P L ++SIP + ++ +++F KV + F ++ Sbjct: 113 ARRL---IDPSLQALRSIPSIAWVPLFILWFGIFEASKVALIAVGVFFPVY--------L 161 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + ++ ++ R + EV R FRLSG+ + +P P V + + GW FVVA+E Sbjct: 162 GVSGAILSVDRKIVEVGRIFRLSGFALVRRVMLPAVFPAYVTALRSGLGLGWMFVVAAEF 221 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269 + + G+G + + I+ A++T + L D LL P + W + Sbjct: 222 MGASE------GLGYLLVDGQQMGKPDQIMAAIITFAVIGKLTDSLLLAVTAPFLTWQDS 275 Query: 270 FRLE 273 +R E Sbjct: 276 YRRE 279 >gi|42782116|ref|NP_979363.1| taurine ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42738040|gb|AAS41971.1| taurine ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 274 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 19/162 (11%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 Q+ I++G ++ RV+ I+ + + IPVG+ IG P + + P + P F Sbjct: 70 QNGSLFIYIG-VSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAF 128 Query: 434 FPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 L + LW + L+ + T + + N I G A D A S Sbjct: 129 ITLFM-----------LWFGIGEQSKIFLITYATFFIVTINTITGVQAVEEDKIRSARSM 177 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 + W+ ++I+P PY TGA A G ++ A + +E+ + Sbjct: 178 GASEWQIMFHVIIPAALPYMYTGAKLAMGSSFMAIVGAEMVA 219 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 8/118 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ ++ IP L F+T +++F IG E + IF I + + +T + + + Sbjct: 115 PVINFIRFIPPLAFITLFMLWFG-------IG-EQSKIFLITYATFFIVTINTITGVQAV 166 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 D +RS S WQ +++ +P ++P + ++M + +V +EM+ + + Sbjct: 167 EEDKIRSARSMGASEWQIMFHVIIPAALPYMYTGAKLAMGSSFMAIVGAEMVAANEGI 224 >gi|24379568|ref|NP_721523.1| putative phosphate ABC transporter, permease protein [Streptococcus mutans UA159] gi|290580431|ref|YP_003484823.1| putative phosphate ABC transporter permease [Streptococcus mutans NN2025] gi|24377513|gb|AAN58829.1|AE014950_12 putative phosphate ABC transporter, permease protein [Streptococcus mutans UA159] gi|254997330|dbj|BAH87931.1| putative phosphate ABC transporter permease protein [Streptococcus mutans NN2025] Length = 311 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P+++++ IP + GF+ +V + +++ G G L+ +F +F + +TF Sbjct: 124 ILQPVVELLVGIPSVVYGFIGLQIVVPFVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR +E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 VDSLKAVPRHYKEASLAMGATRWQTIWRVILNAAKPGIFTAVVFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 VIP Sbjct: 243 GNSAVIP 249 >gi|333008921|gb|EGK28381.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri K-272] gi|333020231|gb|EGK39501.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri K-227] Length = 263 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|218548450|ref|YP_002382241.1| alkanesulfonate transporter permease subunit [Escherichia fergusonii ATCC 35469] gi|218355991|emb|CAQ88607.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 263 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALDLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|134045712|ref|YP_001097198.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C5] gi|132663337|gb|ABO34983.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C5] Length = 277 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 17/184 (9%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ++++ +I+LL + A+S+ + M+L P+LD+MQ++P L +L V++F G+V Sbjct: 97 IITSTLIALLLGIPLGIVKARSKIVSMLLDPLLDVMQTLPSLAYLIPAVLFF---GIGEV 153 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 G IFA+ + + + Q + +L EV ++F + WQ + +P ++P Sbjct: 154 PGVIATVIFAM-PPAIKLTSLGIEQ----VSGELIEVGKAFGGTSWQILTKIELPTAVPS 208 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTML 249 ++ + ++ + VV + I G G+G I I+ L L A +T L Sbjct: 209 IMMGVNQAIMLSFSMVVIAGFIGSG-------GLGEVIISGIQRYSLAPALEAGIAVTFL 261 Query: 250 GVIF 253 VIF Sbjct: 262 AVIF 265 >gi|126458607|ref|YP_001076166.1| taurine ABC transporter permease [Burkholderia pseudomallei 1106a] gi|242311082|ref|ZP_04810099.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|126232375|gb|ABN95788.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242134321|gb|EES20724.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] Length = 283 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 LAL Sbjct: 262 IALALE 267 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 82 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230 >gi|218700547|ref|YP_002408176.1| alkanesulfonate transporter permease subunit [Escherichia coli IAI39] gi|218370533|emb|CAR18340.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] Length = 263 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPTYHLKEAT 262 >gi|217425152|ref|ZP_03456647.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217391757|gb|EEC31784.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 285 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 95 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 154 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 155 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 209 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 210 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 263 Query: 565 FVLALN 570 LAL Sbjct: 264 IALALE 269 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 84 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 143 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 144 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 195 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 196 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 232 >gi|53722593|ref|YP_111578.1| permease component of taurine ABC transporter [Burkholderia pseudomallei K96243] gi|226195983|ref|ZP_03791569.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|52213007|emb|CAH39045.1| permease component of taurine ABC transporter [Burkholderia pseudomallei K96243] gi|225931876|gb|EEH27877.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] Length = 285 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 95 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 154 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 155 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 209 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 210 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 263 Query: 565 FVLALN 570 LAL Sbjct: 264 IALALE 269 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 84 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 143 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 144 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 195 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 196 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 232 >gi|33594562|ref|NP_882206.1| putative transport system permease protein [Bordetella pertussis Tohama I] gi|33564638|emb|CAE43960.1| putative transport system permease protein [Bordetella pertussis Tohama I] gi|332383973|gb|AEE68820.1| putative transport system permease protein [Bordetella pertussis CS] Length = 265 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++F +V I + +P G++ G+ + + + P + P F P+ V Y+ Sbjct: 75 SLFCALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPM---AVLYFG 131 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFP 504 L + +L++F Y + AGA + P + A S +T + +WR ++ P P Sbjct: 132 LG-EMGKVVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTRLQIFWR-VVFPSSIP 189 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + TG A +W + +E+ GLG I+++ + P V +G+ ++ Sbjct: 190 HIFTGLKVAMALSWAVVVAAELVG------AQKGLGFMISDAAQLFQIPVVFIGIALIGL 243 Query: 565 FVLALNRFL 573 L LN L Sbjct: 244 IGLVLNVML 252 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 10/142 (7%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L I +L + + + +G ++ PI+ ++ IP + F+ V+YF GKV+ Sbjct: 80 LVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGLGEMGKVV 139 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +FT+ +N +F Q+ ++P + S ++ Q FW + P S+P Sbjct: 140 -------LIVFTA--FNYSFVSAQAGALSVPMSYYRAAESIGMTRLQIFWRVVFPSSIPH 190 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 + + ++M+ W VVA+E++ Sbjct: 191 IFTGLKVAMALSWAVVVAAELV 212 >gi|15800795|ref|NP_286809.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H7 EDL933] gi|15830271|ref|NP_309044.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H7 str. Sakai] gi|168762926|ref|ZP_02787933.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|217326045|ref|ZP_03442129.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|12514109|gb|AAG55419.1|AE005283_6 putative transport system permease protein [Escherichia coli O157:H7 str. EDL933] gi|13360476|dbj|BAB34440.1| putative transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|189366792|gb|EDU85208.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|209774658|gb|ACI85641.1| putative transport system permease protein [Escherichia coli] gi|209774660|gb|ACI85642.1| putative transport system permease protein [Escherichia coli] gi|209774664|gb|ACI85644.1| putative transport system permease protein [Escherichia coli] gi|217322266|gb|EEC30690.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|326346148|gb|EGD69886.1| Alkanesulfonates transport system permease protein [Escherichia coli O157:H7 str. 1044] Length = 263 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|27377947|ref|NP_769476.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351093|dbj|BAC48101.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 269 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 16/190 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT + ++S LF A L A S+ + + P+L QS+P + VV+F Sbjct: 70 TTYATVCGFLLSALFGIPVAMLIAGSKTVESYVYPLLVFSQSVPKIAIAPLFVVWFGFGI 129 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 KVI A L F + S V Q ++ D+ +++R+ + S +Q F + +P Sbjct: 130 IPKVISAFLLGFFPVVVSAV--------QGFKSVDPDMVDLARAMQGSRFQVFRAVNLPH 181 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM-- 245 ++P + + +S++ +A VVG+ V GIG + +I DL + A+ Sbjct: 182 ALPAIFSGLKVSVT------LAVVGAVVGEFVGSNSGIGYVMQRSIGTFDLPTMFAALVI 235 Query: 246 LTMLGVIFLY 255 L +LGV+ + Sbjct: 236 LALLGVVLFW 245 >gi|323947277|gb|EGB43285.1| inner membrane transport system [Escherichia coli H120] Length = 263 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|320181997|gb|EFW56902.1| Alkanesulfonates transport system permease protein [Shigella boydii ATCC 9905] Length = 242 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 80 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 131 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 132 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 185 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 186 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 241 >gi|229587925|ref|YP_002870044.1| putative histidine ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359791|emb|CAY46641.1| putative histidine ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 283 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T M+ A VIS+L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMMVATVISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|110804943|ref|YP_688463.1| putative transport system permease [Shigella flexneri 5 str. 8401] gi|110614491|gb|ABF03158.1| putative transport system permease protein [Shigella flexneri 5 str. 8401] gi|332759022|gb|EGJ89332.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri 4343-70] gi|332760120|gb|EGJ90418.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri 2747-71] gi|332762707|gb|EGJ92970.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri K-671] gi|332767721|gb|EGJ97912.1| ssuC [Shigella flexneri 2930-71] gi|333006195|gb|EGK25704.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri K-218] gi|333019980|gb|EGK39251.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri K-304] Length = 217 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 55 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 106 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 107 GLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWL------TLIVAETISANS 160 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 161 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 216 >gi|300937718|ref|ZP_07152520.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300457279|gb|EFK20772.1| ABC transporter, permease protein [Escherichia coli MS 21-1] Length = 264 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|15966153|ref|NP_386506.1| putative glycine betaine transport system permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|19880074|gb|AAM00245.1|AF360731_2 ProW [Sinorhizobium meliloti] gi|15075423|emb|CAC46979.1| Putative choline ABC transporter, permease component [Sinorhizobium meliloti 1021] Length = 281 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T +L+A +S+ + AA+ + ++ PILD+MQ+IP +L ++ Sbjct: 91 QETTETLALVLAATFVSMAVGVPFGIAAARRAWIYSIMRPILDLMQTIPTFVYLIPALIL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A I +++ + + P L E + SF + WQ Sbjct: 151 FGLGVVPGLIATVIFAIPAPIRLTRL---------GIISTPPALVEAAESFGATPWQVLR 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +PF+MP GL +M+S+S Sbjct: 202 KVELPFAMPQIMAGLTQTIMLSLS 225 >gi|194434390|ref|ZP_03066653.1| putative sulfonate ABC transporter, permease protein [Shigella dysenteriae 1012] gi|300921026|ref|ZP_07137413.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|331651956|ref|ZP_08352975.1| putative transport system permease protein [Escherichia coli M718] gi|194417374|gb|EDX33480.1| putative sulfonate ABC transporter, permease protein [Shigella dysenteriae 1012] gi|300412017|gb|EFJ95327.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|331050234|gb|EGI22292.1| putative transport system permease protein [Escherichia coli M718] Length = 264 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|167828808|ref|ZP_02460279.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167898868|ref|ZP_02486269.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|254186901|ref|ZP_04893417.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254264574|ref|ZP_04955439.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254301413|ref|ZP_04968857.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157811362|gb|EDO88532.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157934585|gb|EDO90255.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254215576|gb|EET04961.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 283 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 LAL Sbjct: 262 IALALE 267 Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 82 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230 >gi|74311492|ref|YP_309911.1| alkanesulfonate transporter permease subunit [Shigella sonnei Ss046] gi|89107784|ref|AP_001564.1| alkanesulfonate transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|90111188|ref|NP_415454.4| putative alkanesulfonate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|157155333|ref|YP_001462155.1| alkanesulfonate transporter permease subunit [Escherichia coli E24377A] gi|157160456|ref|YP_001457774.1| alkanesulfonate transporter permease subunit [Escherichia coli HS] gi|170020664|ref|YP_001725618.1| alkanesulfonate transporter permease subunit [Escherichia coli ATCC 8739] gi|170080592|ref|YP_001729912.1| alkanesulfonate ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188495708|ref|ZP_03002978.1| putative sulfonate ABC transporter, permease protein [Escherichia coli 53638] gi|191166966|ref|ZP_03028789.1| putative sulfonate ABC transporter, permease protein [Escherichia coli B7A] gi|193064670|ref|ZP_03045749.1| putative sulfonate ABC transporter, permease protein [Escherichia coli E22] gi|193071686|ref|ZP_03052588.1| putative sulfonate ABC transporter, permease protein [Escherichia coli E110019] gi|194428405|ref|ZP_03060946.1| putative sulfonate ABC transporter, permease protein [Escherichia coli B171] gi|194438699|ref|ZP_03070786.1| putative sulfonate ABC transporter, permease protein [Escherichia coli 101-1] gi|218553521|ref|YP_002386434.1| alkanesulfonate transporter permease subunit [Escherichia coli IAI1] gi|218694409|ref|YP_002402076.1| alkanesulfonate transporter permease subunit [Escherichia coli 55989] gi|238900192|ref|YP_002925988.1| alkanesulfonate transporter subunit [Escherichia coli BW2952] gi|253774037|ref|YP_003036868.1| alkanesulfonate transporter permease subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161048|ref|YP_003044156.1| alkanesulfonate transporter permease [Escherichia coli B str. REL606] gi|256018807|ref|ZP_05432672.1| alkanesulfonate transporter permease subunit [Shigella sp. D9] gi|256023364|ref|ZP_05437229.1| alkanesulfonate transporter permease subunit [Escherichia sp. 4_1_40B] gi|260843184|ref|YP_003220962.1| alkanesulfonate transporter subunit [Escherichia coli O103:H2 str. 12009] gi|260854226|ref|YP_003228117.1| alkanesulfonate transporter subunit [Escherichia coli O26:H11 str. 11368] gi|293433231|ref|ZP_06661659.1| ssuC [Escherichia coli B088] gi|301022456|ref|ZP_07186335.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|307137564|ref|ZP_07496920.1| alkanesulfonate transporter permease subunit [Escherichia coli H736] gi|307311679|ref|ZP_07591319.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|312971065|ref|ZP_07785244.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli 1827-70] gi|332279885|ref|ZP_08392298.1| alkanesulfonate transporter subunit [Shigella sp. D9] gi|3915972|sp|P75851|SSUC_ECOLI RecName: Full=Putative aliphatic sulfonates transport permease protein ssuC gi|4583569|emb|CAB40392.1| putative aliphatic sulfonate transport membrane component [Escherichia coli] gi|73854969|gb|AAZ87676.1| putative transport system permease protein [Shigella sonnei Ss046] gi|85674791|dbj|BAA35689.2| alkanesulfonate transporter subunit [Escherichia coli str. K12 substr. W3110] gi|87081802|gb|AAC74020.2| putative alkanesulfonate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|157066136|gb|ABV05391.1| putative sulfonate ABC transporter, permease protein [Escherichia coli HS] gi|157077363|gb|ABV17071.1| putative sulfonate ABC transporter, permease protein [Escherichia coli E24377A] gi|169755592|gb|ACA78291.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli ATCC 8739] gi|169888427|gb|ACB02134.1| alkanesulfonate transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188490907|gb|EDU66010.1| putative sulfonate ABC transporter, permease protein [Escherichia coli 53638] gi|190902960|gb|EDV62686.1| putative sulfonate ABC transporter, permease protein [Escherichia coli B7A] gi|192927727|gb|EDV82342.1| putative sulfonate ABC transporter, permease protein [Escherichia coli E22] gi|192955010|gb|EDV85511.1| putative sulfonate ABC transporter, permease protein [Escherichia coli E110019] gi|194413620|gb|EDX29901.1| putative sulfonate ABC transporter, permease protein [Escherichia coli B171] gi|194422331|gb|EDX38331.1| putative sulfonate ABC transporter, permease protein [Escherichia coli 101-1] gi|218351141|emb|CAU96845.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218360289|emb|CAQ97839.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|238859959|gb|ACR61957.1| alkanesulfonate transporter subunit [Escherichia coli BW2952] gi|242376749|emb|CAQ31462.1| ssuC, subunit of aliphatic sulfonate ABC transporter [Escherichia coli BL21(DE3)] gi|253325081|gb|ACT29683.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972949|gb|ACT38620.1| alkanesulfonate transporter subunit [Escherichia coli B str. REL606] gi|253977163|gb|ACT42833.1| alkanesulfonate transporter subunit [Escherichia coli BL21(DE3)] gi|257752875|dbj|BAI24377.1| alkanesulfonate transporter subunit [Escherichia coli O26:H11 str. 11368] gi|257758331|dbj|BAI29828.1| alkanesulfonate transporter subunit [Escherichia coli O103:H2 str. 12009] gi|260449920|gb|ACX40342.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli DH1] gi|291324050|gb|EFE63472.1| ssuC [Escherichia coli B088] gi|299881219|gb|EFI89430.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|306908234|gb|EFN38733.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|309701210|emb|CBJ00510.1| putative aliphatic sulfonates ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310336826|gb|EFQ01993.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli 1827-70] gi|315060219|gb|ADT74546.1| alkanesulfonate transporter subunit [Escherichia coli W] gi|315135582|dbj|BAJ42741.1| alkanesulfonate transporter permease subunit [Escherichia coli DH1] gi|315619130|gb|EFU99710.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli 3431] gi|320202332|gb|EFW76903.1| Alkanesulfonates transport system permease protein [Escherichia coli EC4100B] gi|323157173|gb|EFZ43296.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli EPECa14] gi|323165408|gb|EFZ51195.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella sonnei 53G] gi|323175440|gb|EFZ61035.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli 1180] gi|323379221|gb|ADX51489.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli KO11] gi|323938040|gb|EGB34302.1| inner membrane transport system [Escherichia coli E1520] gi|323942850|gb|EGB39015.1| inner membrane transport system [Escherichia coli E482] gi|323962926|gb|EGB58500.1| inner membrane transport system [Escherichia coli H489] gi|323973191|gb|EGB68383.1| inner membrane transport system [Escherichia coli TA007] gi|324117201|gb|EGC11109.1| inner membrane transport system [Escherichia coli E1167] gi|332092532|gb|EGI97605.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella boydii 5216-82] gi|332095894|gb|EGJ00901.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella dysenteriae 155-74] gi|332102237|gb|EGJ05583.1| alkanesulfonate transporter subunit [Shigella sp. D9] gi|332342378|gb|AEE55712.1| aliphatic sulfonates transport permease protein SsuC [Escherichia coli UMNK88] Length = 263 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|255015584|ref|ZP_05287710.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_1_7] Length = 274 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 16/159 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ ++L+ A S +L P+LD MQ++P +L V++ Sbjct: 83 EETMQTLALVLSSTGMALMLGIPLGIWMAGSGHCNKILQPVLDCMQTMPAFVYLIPAVLF 142 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F G V GA IFA+ V +T L +P+++EE +RSF + Q + Sbjct: 143 F---GLGTVPGAFATIIFAL--PPVARLT---ALGLRQVPKNVEEAARSFGATPVQLLFK 194 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +P ++P G+ +MMS+S VV + MI G Sbjct: 195 VELPLALPTILAGVNQTIMMSLS----MVVVAAMISAGG 229 >gi|229821916|ref|YP_002883442.1| binding-protein-dependent transport systems inner membrane component [Beutenbergia cavernae DSM 12333] gi|229567829|gb|ACQ81680.1| binding-protein-dependent transport systems inner membrane component [Beutenbergia cavernae DSM 12333] Length = 301 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 8/153 (5%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L QY + +T R+L I L ++ SR + P L +++P L ++ V Sbjct: 98 LGQYVAISTQRVLIGFAIGGLLGLAVGSVVGLSRLSAALFAPTLAGARAVPSLAWVPLLV 157 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++ KVI + A F ++T ++ +L ++ L E R++ L G + Sbjct: 158 LWIGINEDSKVILIAIGAFFPVYT--------TVAGALRHVDPHLVEAGRAYGLCGPRLL 209 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P +P +V + ++++ W F+VA+E++ Sbjct: 210 ARVQLPAVVPAVVSGLRLALAQAWLFLVAAELL 242 >gi|206560415|ref|YP_002231179.1| binding-protein-dependent transport system inner membrane protein [Burkholderia cenocepacia J2315] gi|198036456|emb|CAR52352.1| binding-protein-dependent transport system inner membrane protein [Burkholderia cenocepacia J2315] Length = 291 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + A+ I +G+ IG + + P ++L PA + PL + Sbjct: 96 SITRVLAGFVAAAFAGIGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAI------L 149 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ LS++ I G + IL N + GA A A S G + +ILPG Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAA 209 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P TG G AW + +E+ + + G+G + ES ++P++V+G+ ++ Sbjct: 210 PSIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALI 262 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 33/171 (19%), Positives = 70/171 (40%), Gaps = 8/171 (4%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P D+ + L LP + + R+L+ V + + R L L+P Sbjct: 72 APADVGPALASFLQSPKLPMHLFASITRVLAGFVAAAFAGIGLGLAIGRYRALEDTLLPP 131 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L++++ IP + ++ ++ F + +EL+ +F F ++ + + + Sbjct: 132 LEMLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 L +RS G + + +P + P + + + M WF +V +EMI Sbjct: 184 RLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIA 234 >gi|187729719|ref|YP_001837308.1| binding-protein-dependent transport-like protein [Acidithiobacillus caldus] gi|167782104|gb|ACA00175.1| binding-protein-dependent transport-like protein [Acidithiobacillus caldus] Length = 230 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + +R+ A I + S L ++ P L+I++ IP + ++ ++ ++ Sbjct: 41 SMIRISVAFTIGTIVGIAVGVSVGYSTILRAIISPYLEILRPIPAIAWVPMAIL----MW 96 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P E + IF F V+ + + + + +P +L + +RS + + +P+ Sbjct: 97 PS----TEESIIFITFLGAVFPIALNTWDGVRRVPYELIKAARSLGAKKTSVLFNVVIPY 152 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213 ++P + M + M G WF ++A EMI Sbjct: 153 AIPNITVGMALGMGGAWFALLAGEMI 178 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 21/190 (11%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 ++D+L+ +M R+ V I +I+ I VG+ +G+ + + I P+ ++L PA Sbjct: 35 WKDILW-------SMIRISVAFTIGTIVGIAVGVSVGYSTILRAIISPYLEILRPIPAIA 87 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + P+ + + P+ S++ I G + I N G P + + A S Sbjct: 88 WVPMAI------LMWPSTEESIIFITFLGAVFPIALNTWDGVRRVPYELIKAARSLGAKK 141 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 +++P P G GGAW A + E+ S G G+G + ES E Sbjct: 142 TSVLFNVVIPYAIPNITVGMALGMGGAWFALLAGEMIS-GRF-----GIGYFTWESYELI 195 Query: 551 SFPEVVLGVL 560 + +++G++ Sbjct: 196 QYGNIIVGMV 205 >gi|167836748|ref|ZP_02463631.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 272 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ N L L+ G + + N G + D E+ Sbjct: 112 QMIRNIPALAMIPLVIL---WFGIDENAKL-FLVALGVFFPVYINTYHGIRSVDADLVEM 167 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 168 ARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 221 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G Sbjct: 222 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERATLRWHPAYQPGADA 272 >gi|239928415|ref|ZP_04685368.1| putative ABC transporter [Streptomyces ghanaensis ATCC 14672] gi|291436742|ref|ZP_06576132.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291339637|gb|EFE66593.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length = 262 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 12/169 (7%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G+ +G P + +P + + A P+ P+++ + + + + F + W Sbjct: 81 LGLALGSVPALEDATRPLVEFMRALPSVALLPIMMLLLG----TDDDMKVITIAFVSTWP 136 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N + G + +VA+ + ++ W R++++P P GA A + A ++ Sbjct: 137 ILLNTVEGVRSVDPVLHQVAAGYRLSAWHRIRHLVVPAAMPQIFAGARVALSMSVVAMVL 196 Query: 524 SE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +E V S G GLG ++ +S + G++++ A N+ Sbjct: 197 TEMVGSPG-------GLGYFVLDSQRTFDIVAMWTGLIVLGLIGYAANK 238 >gi|2642138|gb|AAB86903.1| nitrate transporter component [Klebsiella oxytoca] Length = 294 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 139 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 190 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 191 PEDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%) Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 YQD + + W ++ RV V +A++ IP+G IG + P LL Sbjct: 89 YQDGPNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVS 148 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + P + + + P S + + W ++ N G P D+ VA ++ Sbjct: 149 PLAWLP--IGLLLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPEDYLNVARVLQLS 204 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 W R I+ P + P +TG + G AW + +E+ + G Sbjct: 205 EWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245 >gi|317486678|ref|ZP_07945495.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316922061|gb|EFV43330.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 258 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + +R++ V++ L S+ ++ P+ +IM+ +P L ++ V+++ Sbjct: 67 SMMRIVGGFVLAQAIGIPLGLLLGASKAAHNLIYPVFEIMRPVPPLAWVPVAVIFWPT-- 124 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E++ +F F + + ++ + +I +RS S FW++ +P Sbjct: 125 ------PEMSMVFVTFLGAFFIVVINIVDGVRSIDARYLRAARSLGSSRSDMFWHILLPG 178 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213 S+P +V M + M W VVA+EMI Sbjct: 179 SLPSIVVGMTVGMGVTWAVVVAAEMI 204 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 10/168 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M R+V ++A I IP+G+ +G + I P +++ P + P+ V + Sbjct: 67 SMMRIVGGFVLAQAIGIPLGLLLGASKAAHNLIYPVFEIMRPVPPLAWVPVAV----IFW 122 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + + + G + ++ N++ G + + A S + + +I+LPG P Sbjct: 123 PTPEMSMVFVTFLGAFFIVVINIVDGVRSIDARYLRAARSLGSSRSDMFWHILLPGSLPS 182 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 V G G W + +E+ + TGLG + G FP Sbjct: 183 IVVGMTVGMGVTWAVVVAAEMIA------SRTGLGYLTWSAYVAGEFP 224 >gi|254975037|ref|ZP_05271509.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-66c26] gi|255092426|ref|ZP_05321904.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile CIP 107932] gi|255314165|ref|ZP_05355748.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-76w55] gi|255649944|ref|ZP_05396846.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-37x79] gi|260683098|ref|YP_003214383.1| putative aliphatic sulfonate ABC transporter permease [Clostridium difficile CD196] gi|260686696|ref|YP_003217829.1| putative aliphatic sulfonate ABC transporter permease [Clostridium difficile R20291] gi|260209261|emb|CBA62574.1| putative aliphatic sulfonate ABC transporter, permease protein [Clostridium difficile CD196] gi|260212712|emb|CBE03807.1| putative aliphatic sulfonate ABC transporter, permease protein [Clostridium difficile R20291] Length = 256 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 24/181 (13%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+++ +I+S++ IP+G+ G + +P + + + P P+++ Sbjct: 65 RILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 114 Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 LW + ++I + + I N + G N EV SF+++ R + II+P Sbjct: 115 -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPN 173 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 V G G ++ A I +E+ + ++GLG I++ + V++G+ + Sbjct: 174 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 227 Query: 562 M 562 + Sbjct: 228 I 228 >gi|254472307|ref|ZP_05085707.1| binding-protein-dependent transport systems inner membrane component [Pseudovibrio sp. JE062] gi|211958590|gb|EEA93790.1| binding-protein-dependent transport systems inner membrane component [Pseudovibrio sp. JE062] Length = 289 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 15/196 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + A +T +L A+ IS++ ++A+S R +L P+LD+MQ+IP +L + Sbjct: 93 EKAMQTVAILLVAVFISVIIGVPLGVISARSNRFRALLNPVLDLMQTIPSFVYLIPAAML 152 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F GKV AI A + + + ++ E SR+F + WQ Sbjct: 153 F---GLGKV-----PAILATVIYAAPPLIRLTDLGIRYVDAEVVEASRAFGATRWQILKG 204 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P ++ + +M ++A M+V+ ++I G+G + L ++ D L Sbjct: 205 VQIPLALPSIMQGINQTM------MMALAMVVIA-SMIGARGVGETVLLGLQRNDAGQGL 257 Query: 243 YAMLTMLGVIFLYDQL 258 L ++ + ++D++ Sbjct: 258 LGGLAIVVLAVVFDRI 273 >gi|167923398|ref|ZP_02510489.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 283 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 LAL Sbjct: 262 IALALE 267 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 82 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230 >gi|167820438|ref|ZP_02452118.1| permease component of taurine ABC transporter [Burkholderia pseudomallei 91] Length = 255 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 65 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 124 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 125 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 179 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 180 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 233 Query: 565 FVLALN 570 LAL Sbjct: 234 IALALE 239 Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 54 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 113 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 114 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 165 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 166 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 202 >gi|159186005|ref|NP_356598.2| ABC transporter, membrane spanning protein (glycine betaine) [Agrobacterium tumefaciens str. C58] gi|159141139|gb|AAK89383.2| ABC transporter, membrane spanning protein (glycine betaine) [Agrobacterium tumefaciens str. C58] Length = 295 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 25/187 (13%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 V+S++ A+S RL V+ P+LD+MQ++P +L V M L G+V G Sbjct: 112 VMSIVIGLPIGIAMARSNRLQNVVNPVLDVMQTMPSFVYLIPVV---MLLGIGRVPGVIA 168 Query: 137 AAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----G 191 I+AI ++ N+ M + D+ E + +F S QK + + +P ++P G Sbjct: 169 VIIYAIPPMIRLTNLGIRM------VDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAG 222 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + +MM+++ M+V+ ++I + G+G + AI Q ++ L ++G+ Sbjct: 223 INQTIMMALA----------MVVIA-SMIGVQGLGQPVLKAIANQYFTLGVFNGLAIVGI 271 Query: 252 IFLYDQL 258 ++D++ Sbjct: 272 AIIFDRI 278 >gi|82777542|ref|YP_403891.1| alkanesulfonate transporter permease subunit [Shigella dysenteriae Sd197] gi|168751200|ref|ZP_02776222.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168757029|ref|ZP_02782036.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168769932|ref|ZP_02794939.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168776210|ref|ZP_02801217.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168783972|ref|ZP_02808979.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168787366|ref|ZP_02812373.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168802784|ref|ZP_02827791.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|195939651|ref|ZP_03085033.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H7 str. EC4024] gi|208808290|ref|ZP_03250627.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208815207|ref|ZP_03256386.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208822701|ref|ZP_03263020.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209400693|ref|YP_002269606.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|254792134|ref|YP_003076971.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H7 str. TW14359] gi|261227438|ref|ZP_05941719.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261256139|ref|ZP_05948672.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H7 str. FRIK966] gi|291281935|ref|YP_003498753.1| putative sulfonate ABC transporter permease protein [Escherichia coli O55:H7 str. CB9615] gi|309787807|ref|ZP_07682417.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella dysenteriae 1617] gi|81241690|gb|ABB62400.1| putative transport system permease protein [Shigella dysenteriae Sd197] gi|187768358|gb|EDU32202.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188014738|gb|EDU52860.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188998779|gb|EDU67765.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189355924|gb|EDU74343.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189361139|gb|EDU79558.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189372713|gb|EDU91129.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189375323|gb|EDU93739.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|208728091|gb|EDZ77692.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208731855|gb|EDZ80543.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208738186|gb|EDZ85869.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209162093|gb|ACI39526.1| putative sulfonate ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209774662|gb|ACI85643.1| putative transport system permease protein [Escherichia coli] gi|209774666|gb|ACI85645.1| putative transport system permease protein [Escherichia coli] gi|254591534|gb|ACT70895.1| alkanesulfonate transporter subunit, membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290761808|gb|ADD55769.1| Putative sulfonate ABC transporter, permease protein [Escherichia coli O55:H7 str. CB9615] gi|308924206|gb|EFP69703.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella dysenteriae 1617] gi|320192579|gb|EFW67220.1| Alkanesulfonates transport system permease protein [Escherichia coli O157:H7 str. EC1212] gi|320637803|gb|EFX07595.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H7 str. G5101] gi|320642928|gb|EFX12129.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H- str. 493-89] gi|320648385|gb|EFX17040.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H- str. H 2687] gi|320653701|gb|EFX21775.1| alkanesulfonate transporter permease subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659846|gb|EFX27402.1| alkanesulfonate transporter permease subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320664315|gb|EFX31466.1| alkanesulfonate transporter permease subunit [Escherichia coli O157:H7 str. LSU-61] gi|326338170|gb|EGD61999.1| Alkanesulfonates transport system permease protein [Escherichia coli O157:H7 str. 1125] Length = 263 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|167743261|ref|ZP_02416035.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 14] Length = 254 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 64 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 123 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 124 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 178 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 179 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 232 Query: 565 FVLALN 570 LAL Sbjct: 233 IALALE 238 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 53 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 112 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 113 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 164 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 165 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 201 >gi|167031338|ref|YP_001666569.1| choline ABC transporter permease [Pseudomonas putida GB-1] gi|166857826|gb|ABY96233.1| choline ABC transporter, permease protein [Pseudomonas putida GB-1] Length = 281 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++ A V+ ++ LAA + P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y +C++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICDVPQELMDAGKAFGCSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPHAMPSIAAGVTQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 ISLGFEAGLAIVLLAIMLDRICKQP 273 >gi|254185129|ref|ZP_04891718.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|184215721|gb|EDU12702.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 283 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 LAL Sbjct: 262 IALALE 267 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 82 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230 >gi|323185357|gb|EFZ70721.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli 1357] Length = 259 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 97 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 148 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 149 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 202 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 203 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 258 >gi|300824178|ref|ZP_07104297.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|331667316|ref|ZP_08368181.1| putative transport system permease protein [Escherichia coli TA271] gi|331676724|ref|ZP_08377420.1| putative transport system permease protein [Escherichia coli H591] gi|300523354|gb|EFK44423.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|331065672|gb|EGI37565.1| putative transport system permease protein [Escherichia coli TA271] gi|331075413|gb|EGI46711.1| putative transport system permease protein [Escherichia coli H591] Length = 278 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 116 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 167 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 168 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 221 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 222 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 277 >gi|238797256|ref|ZP_04640757.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] gi|238718893|gb|EEQ10708.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] Length = 255 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+++ + A + +P GI +G P + + + P ++ P + PL+V Sbjct: 63 SLGRILIALFAAVALGVPTGIAMGLSPRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGIGE 122 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + +AG + A + + W+ R+++LP P Sbjct: 123 TS-KILLIYLAIFAP---VTLAAVAGVRSVAQVRVRAARALGASRWQVLRFVVLPSALPE 178 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 179 ILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAII 232 Query: 566 VLALN 570 + Sbjct: 233 AFGME 237 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 8/121 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S R+ VL P+++I + +P L +L V++F IG E + I I+ + +T Sbjct: 88 SPRVRAVLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTL 139 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ + +R+ S WQ ++ +P ++P ++ + + + GW +VA+E+ Sbjct: 140 AAVAGVRSVAQVRVRAARALGASRWQVLRFVVLPSALPEILTGIRIGLGVGWSTLVAAEL 199 Query: 213 I 213 I Sbjct: 200 I 200 >gi|237510087|ref|ZP_04522802.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|235002292|gb|EEP51716.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] Length = 253 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 63 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 122 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 123 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 177 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 178 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 231 Query: 565 FVLALN 570 LAL Sbjct: 232 IALALE 237 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 52 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 111 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 112 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 163 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 164 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 200 >gi|254193642|ref|ZP_04900074.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|169650393|gb|EDS83086.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei S13] Length = 285 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 95 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 154 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 155 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 209 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 210 DILTGMRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 263 Query: 565 FVLALN 570 LAL Sbjct: 264 IALALE 269 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/157 (20%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 84 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 143 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 144 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 195 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ M +++ GW +VA+E+I Sbjct: 196 VQLLRHVVLPSALPDILTGMRIALGAGWSTLVAAELI 232 >gi|76817512|ref|YP_335779.1| permease component of taurine ABC transporter [Burkholderia pseudomallei 1710b] gi|76581985|gb|ABA51459.1| permease component of taurine ABC transporter [Burkholderia pseudomallei 1710b] Length = 253 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 63 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 122 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 123 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 177 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 178 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 231 Query: 565 FVLALN 570 LAL Sbjct: 232 IALALE 237 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 52 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 111 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 112 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 163 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 164 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 200 >gi|331646200|ref|ZP_08347303.1| putative aliphatic sulfonates transport permease protein SsuC [Escherichia coli M605] gi|330910714|gb|EGH39224.1| alkanesulfonates transport system permease protein [Escherichia coli AA86] gi|331044952|gb|EGI17079.1| putative aliphatic sulfonates transport permease protein SsuC [Escherichia coli M605] Length = 264 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 GLVEMARSYGLSGMPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|304398693|ref|ZP_07380565.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] gi|304353904|gb|EFM18279.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] Length = 363 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 23/171 (13%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+A++ +L A+S R ++ P+LD MQ+ P +L V+ F G V Sbjct: 160 VLTALMFCILIGLPLGIWLARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNV 216 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 G + IFA+ + +T + +P DL E S SF S Q + + +P +MP Sbjct: 217 PGVVVTIIFAL--PPIVRLTI---LGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPT 271 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +M+++S VV + MI VG G+G + I D+ Sbjct: 272 IMAGVNQTLMLALS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 311 >gi|303244148|ref|ZP_07330486.1| binding-protein-dependent transport systems inner membrane component [Methanothermococcus okinawensis IH1] gi|302485533|gb|EFL48459.1| binding-protein-dependent transport systems inner membrane component [Methanothermococcus okinawensis IH1] Length = 257 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 9/189 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+ +IA I+ +P+GI +G+ I F +LL P + PL ++++ Sbjct: 63 ISIKRVLSGFLIAGIVAVPLGILMGYFSIIHDLFDTFIELLRPIPPLAWVPL---ALAWF 119 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L ++ I G + IL N IAG + P E + +I+P P Sbjct: 120 GIGETSMLFIIFI-GAFFPILINTIAGVKSVPKILIESVQTLGAKEKDILLKVIIPASSP 178 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG G AW + +E+ GLG I + VV ++I+ Sbjct: 179 GILTGLRVGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSRMDIVVASMVIIGI 233 Query: 565 FVLALNRFL 573 L+L+R L Sbjct: 234 IGLSLDRGL 242 >gi|255306450|ref|ZP_05350621.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile ATCC 43255] Length = 229 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 40/196 (20%), Positives = 88/196 (44%), Gaps = 25/196 (12%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+++ +I+S++ IP+G+ G + +P + + + P P+++ Sbjct: 38 RILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 87 Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 LW + ++I + + I N + G N EV SF+++ R + II+P Sbjct: 88 -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPN 146 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 V G G ++ A I +E+ + ++GLG I++ + V++G+ + Sbjct: 147 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 200 Query: 562 MCCFVLALNRFLWHPL 577 + F+ L+ +L+ + Sbjct: 201 I-GFLGILSDYLFSKI 215 >gi|327253725|gb|EGE65354.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli STEC_7v] Length = 263 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|323159564|gb|EFZ45544.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli E128010] Length = 263 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|300310817|ref|YP_003774909.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073602|gb|ADJ63001.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 256 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 12/146 (8%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I +P+GI++G + + P+ + P F L V L P + +IF Sbjct: 80 VIGVPLGIFMGRFETVRQLLDPYIEFFRFIPPIAFVTLAV-----IWLGPGELSKIALIF 134 Query: 459 GTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 T +I+ N IAG A A+S W+ +ILP P+ VTGA A G + Sbjct: 135 YTTVFIVTLNTIAGVQAVNPLRLRAAASLGAGQWKILSTVILPSTVPFMVTGARIAMGNS 194 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYI 543 + + +E+ S GLGA I Sbjct: 195 FLTVVSAEIVS------AREGLGALI 214 >gi|89053990|ref|YP_509441.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] gi|88863539|gb|ABD54416.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] Length = 327 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 72/144 (50%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + +LSA V+ + A RL + P+LD+MQ++P +L +V+ Sbjct: 142 EETTESLTLVLSACVVCMGVGVPIGIAVAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVF 201 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A + + + + +T + + + P+ L E + +F +G QK W Sbjct: 202 FGIGMVPGLI-----ATVIFVLPAPI-RLT---HLGISSTPQSLLEAADAFGATGSQKLW 252 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 253 KVELPYALPQIMTGLNQTIMLSLS 276 >gi|30249698|ref|NP_841768.1| putative transport system permease [Nitrosomonas europaea ATCC 19718] gi|30180735|emb|CAD85647.1| putative transport system permease [Nitrosomonas europaea ATCC 19718] Length = 278 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 7/125 (5%) Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 IG + AA+F +F + + M+ S+ +L IP + +++R+ S + +W++ +P PG Sbjct: 146 IGGQ-AAVFIVFMAVLGTMSLSLIAALDGIPAEYLKIARNLGTSRMRMWWHVRLPAITPG 204 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + MS G W V+A EM + G+G I +A + ++ ++ +L + + Sbjct: 205 AMTAIRMSFFGAWMAVLAGEMAGINS------GLGYMIIMAQQMYNMKLVMIGILAIGFI 258 Query: 252 IFLYD 256 F D Sbjct: 259 GFAID 263 >gi|110641130|ref|YP_668860.1| alkanesulfonate transporter permease subunit [Escherichia coli 536] gi|191172134|ref|ZP_03033678.1| putative sulfonate ABC transporter, permease protein [Escherichia coli F11] gi|215486059|ref|YP_002328490.1| alkanesulfonate transporter permease subunit [Escherichia coli O127:H6 str. E2348/69] gi|218557839|ref|YP_002390752.1| alkanesulfonate transporter permease subunit [Escherichia coli S88] gi|218704364|ref|YP_002411883.1| alkanesulfonate permease [Escherichia coli UMN026] gi|293409312|ref|ZP_06652888.1| ssuC [Escherichia coli B354] gi|300983007|ref|ZP_07176411.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|301023062|ref|ZP_07186869.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|306812612|ref|ZP_07446805.1| alkanesulfonate transporter permease subunit [Escherichia coli NC101] gi|312969000|ref|ZP_07783207.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli 2362-75] gi|331682445|ref|ZP_08383064.1| putative aliphatic sulfonates transport permease protein SsuC [Escherichia coli H299] gi|110342722|gb|ABG68959.1| putative aliphatic sulfonates transport permease protein [Escherichia coli 536] gi|190907661|gb|EDV67256.1| putative sulfonate ABC transporter, permease protein [Escherichia coli F11] gi|215264131|emb|CAS08475.1| alkanesulfonate transporter subunit, membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|218364608|emb|CAR02294.2| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218431461|emb|CAR12339.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|222032665|emb|CAP75404.1| aliphatic sulfonates transport permease protein ssu [Escherichia coli LF82] gi|291469780|gb|EFF12264.1| ssuC [Escherichia coli B354] gi|300307024|gb|EFJ61544.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300397183|gb|EFJ80721.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|305853375|gb|EFM53814.1| alkanesulfonate transporter permease subunit [Escherichia coli NC101] gi|307627638|gb|ADN71942.1| alkanesulfonate transporter permease subunit [Escherichia coli UM146] gi|312286402|gb|EFR14315.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli 2362-75] gi|312945454|gb|ADR26281.1| alkanesulfonate transporter permease subunit [Escherichia coli O83:H1 str. NRG 857C] gi|320196571|gb|EFW71194.1| Alkanesulfonates transport system permease protein [Escherichia coli WV_060327] gi|324012923|gb|EGB82142.1| ABC transporter, permease protein [Escherichia coli MS 60-1] gi|325496872|gb|EGC94731.1| alkanesulfonate transporter permease subunit [Escherichia fergusonii ECD227] gi|331080076|gb|EGI51255.1| putative aliphatic sulfonates transport permease protein SsuC [Escherichia coli H299] Length = 263 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|26987037|ref|NP_742462.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148545570|ref|YP_001265672.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|24981657|gb|AAN65926.1|AE016220_8 glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148509628|gb|ABQ76488.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|313496659|gb|ADR58025.1| Glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas putida BIRD-1] Length = 281 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++ A V+ ++ LAA + P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y +C++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICDVPQELMDAGKAFGCSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPHAMPSIAAGVTQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 ISLGFEAGLAIVLLAIMLDRICKQP 273 >gi|167850265|ref|ZP_02475773.1| permease component of taurine ABC transporter [Burkholderia pseudomallei B7210] Length = 252 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 62 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 121 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 122 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 176 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 177 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 230 Query: 565 FVLALN 570 LAL Sbjct: 231 IALALE 236 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 51 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 110 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 111 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 162 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 163 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 199 >gi|134282026|ref|ZP_01768732.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|134246555|gb|EBA46643.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 305] Length = 283 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 LAL Sbjct: 262 IALALE 267 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 82 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230 >gi|126442420|ref|YP_001063214.1| taurine ABC transporter permease [Burkholderia pseudomallei 668] gi|126221911|gb|ABN85416.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 668] Length = 283 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 153 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 LAL Sbjct: 262 IALALE 267 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 82 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 141 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 142 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 193 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 194 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 230 >gi|325288976|ref|YP_004265157.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324964377|gb|ADY55156.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 263 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 13/207 (6%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 GY+ N T + I I+ +R+ + I+A++I IP+GI G + IQP ++ Sbjct: 53 GYLANVMTTGQIWSDI---GISFYRIFMGFILAAVIGIPLGILAGTFNFAEALIQPVSEF 109 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + P F PL++ V +N + ++++ + GT + ++ V A P+D A Sbjct: 110 IRYMPVPAFVPLIMVWVG---INESAKIAVIFL-GTLFQLIPMVADSVRAVPDDLLSAAY 165 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + +I+P I P + G AW +V+E+ + +GLG I Sbjct: 166 TLGAKPRTVILKVIIPAIAPRTMDTLRIMMGWAWTYLVVAELVA------ANSGLGYSIL 219 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNR 571 ++ + G+LI+ L +R Sbjct: 220 KAQRFLKTDAIFGGILIIGFLGLMTDR 246 >gi|324019054|gb|EGB88273.1| ABC transporter, permease protein [Escherichia coli MS 117-3] Length = 278 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 116 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 167 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 168 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 221 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 222 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 277 >gi|300709404|ref|YP_003735218.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3] gi|299123087|gb|ADJ13426.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3] Length = 251 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 15/189 (7%) Query: 368 VNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + F QD WL + RV+V ++A+ + IP+G+ +G + P ++L Sbjct: 43 LEEFYRQD----FWLSVARSTVRVLVSFVVAAAVAIPLGLLVGRYTVFADLTFPALEMLR 98 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P + P + + L+ + + G + IL N I GA +F A S Sbjct: 99 PIPPIAWIPFTILVLPASELS----IMFITFLGAFFPILLNTIQGARGVEVEFSRAAQSL 154 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 ++ +R++I P P G I G AW I E+ + G TGLG + Sbjct: 155 GAGSFQTFRHVIYPSALPAIHAGMIVGMGLAWVNLIAGEMVAGG------TGLGFLTWSA 208 Query: 547 TEKGSFPEV 555 GS+P + Sbjct: 209 YTSGSYPTI 217 >gi|167724288|ref|ZP_02407524.1| permease component of taurine ABC transporter [Burkholderia pseudomallei DM98] Length = 256 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 66 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 125 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 126 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 180 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 181 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 234 Query: 565 FVLALN 570 LAL Sbjct: 235 IALALE 240 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 55 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 114 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 115 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 166 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 167 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 203 >gi|26246962|ref|NP_753002.1| alkanesulfonate transporter permease subunit [Escherichia coli CFT073] gi|91210036|ref|YP_540022.1| alkanesulfonate transporter permease subunit [Escherichia coli UTI89] gi|117623152|ref|YP_852065.1| alkanesulfonate transporter permease subunit [Escherichia coli APEC O1] gi|170683085|ref|YP_001744235.1| alkanesulfonate transporter permease subunit [Escherichia coli SMS-3-5] gi|227884100|ref|ZP_04001905.1| alkanesulfonate transporter permease subunit [Escherichia coli 83972] gi|237707077|ref|ZP_04537558.1| alkanesulfonate transporter permease subunit [Escherichia sp. 3_2_53FAA] gi|293404239|ref|ZP_06648233.1| aliphatic sulfonates transport system permease [Escherichia coli FVEC1412] gi|298380023|ref|ZP_06989628.1| sulfonate/nitrate/taurine transport system permease [Escherichia coli FVEC1302] gi|300896320|ref|ZP_07114863.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300978398|ref|ZP_07174249.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301047802|ref|ZP_07194855.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|331657006|ref|ZP_08357968.1| putative aliphatic sulfonates transport permease protein SsuC [Escherichia coli TA206] gi|331662352|ref|ZP_08363275.1| putative aliphatic sulfonates transport permease protein SsuC [Escherichia coli TA143] gi|26107362|gb|AAN79545.1|AE016758_149 Putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli CFT073] gi|91071610|gb|ABE06491.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli UTI89] gi|115512276|gb|ABJ00351.1| SsuC [Escherichia coli APEC O1] gi|170520803|gb|ACB18981.1| putative sulfonate ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|226898287|gb|EEH84546.1| alkanesulfonate transporter permease subunit [Escherichia sp. 3_2_53FAA] gi|227838852|gb|EEJ49318.1| alkanesulfonate transporter permease subunit [Escherichia coli 83972] gi|291428825|gb|EFF01850.1| aliphatic sulfonates transport system permease [Escherichia coli FVEC1412] gi|294492255|gb|ADE91011.1| putative sulfonate ABC transporter, permease protein [Escherichia coli IHE3034] gi|298279721|gb|EFI21229.1| sulfonate/nitrate/taurine transport system permease [Escherichia coli FVEC1302] gi|300300334|gb|EFJ56719.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300359785|gb|EFJ75655.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300409686|gb|EFJ93224.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|307552773|gb|ADN45548.1| aliphatic sulfonates transport permease protein with ABC type-1 transporter domain [Escherichia coli ABU 83972] gi|315287579|gb|EFU46985.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315291195|gb|EFU50555.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|315296249|gb|EFU55556.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|323953357|gb|EGB49223.1| inner membrane transport system [Escherichia coli H252] gi|323958240|gb|EGB53949.1| inner membrane transport system [Escherichia coli H263] gi|331055254|gb|EGI27263.1| putative aliphatic sulfonates transport permease protein SsuC [Escherichia coli TA206] gi|331060774|gb|EGI32738.1| putative aliphatic sulfonates transport permease protein SsuC [Escherichia coli TA143] Length = 264 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|323967181|gb|EGB62605.1| inner membrane transport system [Escherichia coli M863] Length = 264 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|320183835|gb|EFW58668.1| Alkanesulfonates transport system permease protein [Shigella flexneri CDC 796-83] Length = 161 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 23/177 (12%) Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 +++++P L + +++F K+ L +F I+ + + + NI R L Sbjct: 1 MLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDRGL 52 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I GI Sbjct: 53 VEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------GI 106 Query: 226 GSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 G Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 107 G-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 160 >gi|300718729|ref|YP_003743532.1| taurine ABC transporter permease [Erwinia billingiae Eb661] gi|299064565|emb|CAX61685.1| Taurine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 275 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 21/205 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ + A II +PVGI +G + P +L P + PL+V Sbjct: 81 AASLTRILIALFAAVIIGVPVGILMGLSATARGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S W+ ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGGNRWQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL---GVL 560 P +TG G W+ + +E+ + T GLG ++ +S + +VVL V+ Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVI 249 Query: 561 IMCCFVL-----ALNRFL--WHPLY 578 + F L AL R L WH ++ Sbjct: 250 ALIAFTLELGLRALQRRLTPWHGVH 274 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/151 (20%), Positives = 72/151 (47%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R+L A+ +++ L S +L P++++ + +P L +L V++ Sbjct: 78 QHLAASLTRILIALFAAVIIGVPVGILMGLSATARGILDPLIELYRPVPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + + + ++S + WQ W+ Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGGNRWQVLWF 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELI 220 >gi|222055627|ref|YP_002537989.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221564916|gb|ACM20888.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 251 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 14/156 (8%) Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS--LLMIFGTQWYILFNVIA 470 + + + P + ++ P + P ++ + P WLS ++ G W IL I Sbjct: 87 RLRTILMPIFRGVSPIPPTMLIPYAIAIL------PTFWLSSAFIIFAGAFWPILMGTIH 140 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G + + + AS+ + G+R R +I PG P +GA A ++ V+E+ Sbjct: 141 GVTLLEERYLDNASALGLGGFRLMRKVIFPGALPMIFSGAGMALVFSFILLTVAEMFG-- 198 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G+G +I + +P+V+ G+L M + Sbjct: 199 ----AKAGMGHFIQYYADFSDYPKVLAGMLFMSLVI 230 >gi|71905722|ref|YP_283309.1| binding-protein dependent transport system inner membrane protein [Dechloromonas aromatica RCB] gi|71845343|gb|AAZ44839.1| Binding-protein-dependent transport systems inner membrane component [Dechloromonas aromatica RCB] Length = 318 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 10/161 (6%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+SI+ +P+GI G + +PF + PA F L V+ + Y P + + + Sbjct: 133 VISSIVGVPLGILAGTYASLGRLSEPFIEFFRYLPAPAFGALAVAVLGIYD-GPKIAIIV 191 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + F Q I+ N A E A + GWR +++PGI P Sbjct: 192 IGTFFQQVLIIANTTRKLEA---TLIEAARTLGSRGWRLIARVVVPGILPNLYQDQRILL 248 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 G AW IV+E+ ++G+ YI + F V Sbjct: 249 GWAWTYLIVAELIG------TSSGITWYITQQARYQHFDNV 283 >gi|77456591|ref|YP_346096.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77380594|gb|ABA72107.1| putative histidine ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 283 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T M+ A VIS+L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMMVATVISVLIGVPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|312958480|ref|ZP_07773000.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311287023|gb|EFQ65584.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 283 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T M+ A VIS+L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMMVATVISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|221635657|ref|YP_002523533.1| nitrate transport permease protein NrtB [Thermomicrobium roseum DSM 5159] gi|221157705|gb|ACM06823.1| nitrate transport permease protein NrtB [Thermomicrobium roseum DSM 5159] Length = 271 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 10/182 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV V + +++++ IP+G+ IG P I+ + P QL+ + PL + + Sbjct: 69 RVGVGLALSALLGIPLGVVIGSVPWIARLLGPSLQLVRMVSPLAWMPLALLVFGAGSRS- 127 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + L++ T W I+ + G + V S + W R I+ PGI P + Sbjct: 128 ---VVFLIVLATLWPIVLSTADGVMRVDPRWLLVGRSLGASRWELLRTIVWPGIRPRVLG 184 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G A G AW + +E+ +GLG I ++ ++ + E++ +L++ LA Sbjct: 185 GMRLAVGVAWIVLVPAEMLG------VDSGLGYAILDARDRLDYGELMAVLLVIGMSGLA 238 Query: 569 LN 570 L+ Sbjct: 239 LD 240 >gi|300819177|ref|ZP_07099378.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300902903|ref|ZP_07120848.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300925385|ref|ZP_07141271.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300929633|ref|ZP_07145094.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300949697|ref|ZP_07163678.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300955413|ref|ZP_07167789.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|301302450|ref|ZP_07208581.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301326652|ref|ZP_07219982.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301643457|ref|ZP_07243505.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|309795077|ref|ZP_07689497.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|331641462|ref|ZP_08342597.1| putative transport system permease protein [Escherichia coli H736] gi|300317702|gb|EFJ67486.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300405045|gb|EFJ88583.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300418514|gb|EFK01825.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300450912|gb|EFK14532.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300462410|gb|EFK25903.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300528196|gb|EFK49258.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300842289|gb|EFK70049.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300846697|gb|EFK74457.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301078171|gb|EFK92977.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|308121381|gb|EFO58643.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|315257980|gb|EFU37948.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|331038260|gb|EGI10480.1| putative transport system permease protein [Escherichia coli H736] Length = 278 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 116 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 167 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 168 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 221 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 222 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 277 >gi|333029180|ref|ZP_08457241.1| binding-protein-dependent transport systems inner membrane component [Bacteroides coprosuis DSM 18011] gi|332739777|gb|EGJ70259.1| binding-protein-dependent transport systems inner membrane component [Bacteroides coprosuis DSM 18011] Length = 281 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 16/154 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 T +LS+ I+LL A S R +L P+LD MQ++P +L V++F Sbjct: 90 ETLALVLSSTFIALLIGVPLGVWTAYSDRCDKILRPVLDFMQTMPAFVYLIPAVLFF--- 146 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V GA IFA+ V +T + +P+++ E + S + WQ + + +P Sbjct: 147 GLGPVPGAFATVIFAM--PPVVRLT---GLGIRQVPKNIVEATTSLGATRWQLLFKVQLP 201 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 ++P G+ +MMS+S VV + MI G Sbjct: 202 LALPTILTGVNQTIMMSLS----MVVIAAMIAAG 231 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 11/168 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIW 401 FW ++ +AI +AW+ G V F+ +L + +G T+ V+ IA +I Sbjct: 49 FWITIIV-MAI-LAWKKAGKGVALFSVLGLLLIWGMGFWEPTMETLALVLSSTFIALLIG 106 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+G+W + ++P + PA V+ + V ++ L P +IF Sbjct: 107 VPLGVWTAYSDRCDKILRPVLDFMQTMPAFVYL---IPAVLFFGLGPVPGAFATVIFAMP 163 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + + G P + E +S T W+ + LP P +TG Sbjct: 164 PVVRLTGL-GIRQVPKNIVEATTSLGATRWQLLFKVQLPLALPTILTG 210 >gi|325289953|ref|YP_004266134.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324965354|gb|ADY56133.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 253 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 34/180 (18%), Positives = 80/180 (44%), Gaps = 10/180 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ FRV++ +++ +I P+G+ +GF + + P L+ P VF PL++ + Sbjct: 59 VSAFRVILSTVLSLLIGFPLGLIMGFEAKLDKILAPVVYLIYPVPKIVFLPLILFFLGLG 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ ++ ++ F IL P + + S ++ +R++++P P Sbjct: 119 DISKVFLITFIVFF----QILVTTRDAVKKVPFEMIDSLRSLGGNRFQIYRHVLIPASLP 174 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +T + G A +E + + GLG +I ++ + + E+ G+++M Sbjct: 175 DVLTALRVSMGTAIAVLFFAESFA------TSQGLGYFIMDAWSRSAQDEMFAGIIVMGA 228 >gi|241896063|ref|ZP_04783359.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Weissella paramesenteroides ATCC 33313] gi|241870711|gb|EER74462.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Weissella paramesenteroides ATCC 33313] Length = 576 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ T ++ N Sbjct: 122 AKNEVVNKIVQPILDFMQTMPAFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMAN 178 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + +P DL E + SF +G QK + + +P + G+ +M+++S Sbjct: 179 L------GIRQVPNDLVEAADSFGSTGTQKLFKIELPLAKKTIFSGINQTLMLALS---- 228 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+VV ++I PG+G + A+++ D+ Sbjct: 229 ------MVVVA-SMIGAPGLGRGVLAAVQDADI 254 >gi|194428846|ref|ZP_03061381.1| taurine uptake ABC transporter, permease protein [Escherichia coli B171] gi|194413149|gb|EDX29436.1| taurine uptake ABC transporter, permease protein [Escherichia coli B171] Length = 275 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ + A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVLALRAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|296111716|ref|YP_003622098.1| betaine ABC transporter permease and substrate binding protein [Leuconostoc kimchii IMSNU 11154] gi|295833248|gb|ADG41129.1| betaine ABC transporter permease and substrate binding protein [Leuconostoc kimchii IMSNU 11154] Length = 568 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A VISL+ L AKS + ++ PILD MQ++P +L V +F + + PG Sbjct: 102 ASVISLVIGIPLGILTAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 +FA + M + +P L E + SF + WQK L +P + + Sbjct: 158 -----VFASIIFALPPMVRMTDLGIRQVPIALVEAADSFGSTTWQKLIKLELPNARNTIL 212 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G +M+++S +VV ++I PG+G + A++ D+ Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQRADV 250 >gi|284920785|emb|CBG33848.1| putative aliphatic sulfonates ABC transporter, permease protein [Escherichia coli 042] Length = 264 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 RLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|222480558|ref|YP_002566795.1| binding-protein-dependent transport systems inner membrane component [Halorubrum lacusprofundi ATCC 49239] gi|222453460|gb|ACM57725.1| binding-protein-dependent transport systems inner membrane component [Halorubrum lacusprofundi ATCC 49239] Length = 267 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L V P++ ++ +P L + F + +F + G A F I W ++ Y Sbjct: 106 LDDVTAPLVRTLRPVPPLALIGFAIAWFGINHAG--------AAFIIAVGAFWINFYASY 157 Query: 156 QSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ + DL +V R+ + G + +P SMPG+ + + W VVASE+ Sbjct: 158 GAVEGVSEDLLDVGRTLGVRGDLDMVRSIVLPASMPGITTGIRTGLGRCWMLVVASEIFG 217 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 V PG+G I L L+ + A + +L ++FL + FR Sbjct: 218 V-------PGVGREI-LRASNNLLVDKVIAYILVLSLMFLLVDVAFR 256 >gi|52142494|ref|YP_084335.1| sulfonate/taurine ABC transporter permease [Bacillus cereus E33L] gi|51975963|gb|AAU17513.1| ABC transporter, permease protein; possible sulfonate/taurine transporter [Bacillus cereus E33L] Length = 274 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 I++G ++ RV+ I+ + + IPVG+ IG P + + P + P F L + Sbjct: 76 IYIG-VSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFM- 133 Query: 440 CVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 LW + L+ + T + + N I G A D A S + W+ Sbjct: 134 ----------LWFGIGEQSKIFLITYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQ 183 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 ++I+P PY TGA A G ++ A + +E+ + Sbjct: 184 IMFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVA 219 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 8/118 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ ++ IP L F+T +++F IG E + IF I + + +T + + + Sbjct: 115 PVINFIRFIPPLAFITLFMLWFG-------IG-EQSKIFLITYATFFIVTINTITGVQAV 166 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 D +RS S WQ +++ +P ++P + ++M + +V +EM+ + + Sbjct: 167 EEDKIRSARSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVAANEGI 224 >gi|317049234|ref|YP_004116882.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316950851|gb|ADU70326.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 371 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 186 ARSERAARIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 240 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E S SF S Q + + +P +MP G+ +M+++S Sbjct: 241 TI---LGIKQVPADLIEASESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 293 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 294 VVIASMIAVG-------GLGQMVLRGIGRLDM 318 >gi|108805376|ref|YP_645313.1| binding-protein-dependent transport systems inner membrane component [Rubrobacter xylanophilus DSM 9941] gi|108766619|gb|ABG05501.1| binding-protein-dependent transport systems inner membrane component [Rubrobacter xylanophilus DSM 9941] Length = 293 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 12/143 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + A T +++A ++L+ +AAKSR + VL P+LD MQ++P +L +V Sbjct: 94 EDAMLTLALVIAATAVALVVGIPLGIVAAKSRGVETVLRPVLDFMQTMPAFVYLVPAIVL 153 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 +GA A + + + + +M L + ++ E + +F +GWQ Sbjct: 154 LG-------LGAAPALVAVVIFAMPPAVRLTML-GLQQVSKETVEAASAFGATGWQTLRK 205 Query: 183 LGVPFSMP----GLVWNMMMSMS 201 + +P +MP G+ +M+S+S Sbjct: 206 VELPLAMPTIMAGVNQVIMLSLS 228 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 4/125 (3%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ V+ +A ++ IP+GI + + ++P + PA V+ V + Sbjct: 98 LTLALVIAATAVALVVGIPLGIVAAKSRGVETVLRPVLDFMQTMPAFVYL---VPAIVLL 154 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L ++IF + ++ G + E AS+F TGW+ R + LP P Sbjct: 155 GLGAAPALVAVVIFAMPPAVRLTML-GLQQVSKETVEAASAFGATGWQTLRKVELPLAMP 213 Query: 505 YYVTG 509 + G Sbjct: 214 TIMAG 218 >gi|221209826|ref|ZP_03582807.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD1] gi|221170514|gb|EEE02980.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD1] Length = 287 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61 PP +RR + + L + ++ G++ +P ++V D + Sbjct: 21 PPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDTLARMGAARV 80 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 ++ + LR+ + I V SRR+ +L P +++IP L ++ ++ Sbjct: 81 ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + K+ L AI A F + ++ + N+ R L E+ +RL F Sbjct: 141 WLGIDEAPKIT---LIAIGAFFP-----VHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P ++P LV + +S W F+VA+E+I Sbjct: 193 RILLPAALPQLVTGLRTGLSLAWMFMVAAELIAA 226 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 25/178 (14%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV I + + + VG +G I + ++P Q L A P+ + P+++ Sbjct: 87 SALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLL------- 139 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + V+AG E+ + + + +R I+ Sbjct: 140 ----LWLGIDEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFRRIL 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 LP P VTG T AW + +E+ + T GLG +++ E G P++V Sbjct: 196 LPAALPQLVTGLRTGLSLAWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 246 >gi|323976679|gb|EGB71767.1| inner membrane transport system [Escherichia coli TW10509] Length = 264 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|167907187|ref|ZP_02494392.1| permease component of taurine ABC transporter [Burkholderia pseudomallei NCTC 13177] Length = 256 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 66 SVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGD 125 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 126 AS-----KILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALP 180 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 181 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 234 Query: 565 FVLALN 570 LAL Sbjct: 235 IALALE 240 Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust. Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L +L Sbjct: 55 DDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYL 114 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 VV+F IG + + I I+ + + + + + S + Sbjct: 115 PLMVVWFG-------IG-DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATR 166 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q ++ +P ++P ++ + +++ GW +VA+E+I Sbjct: 167 VQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELI 203 >gi|2808669|emb|CAA11380.1| abcB [Paracoccus denitrificans PD1222] Length = 267 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 54/267 (20%), Positives = 114/267 (42%), Gaps = 16/267 (5%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 PP + + P + +LA +LV + + L Q P ++ + L A Sbjct: 14 PPSLRPGLVPGVLSILAMLLVWTLASQLTDRPQTLPAPWEVAARIMRLGASGELWFNAGM 73 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126 T R++++ +++ +SR L P L I+ ++P L + ++ +N Sbjct: 74 TLFRVVASFALAMAAGMALGLWMGRSRGADQWLNPGLIILLNVPALVVIVLCYIWIGLN- 132 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 E AAI A+ +++ +T + + + DL++++R+FR+ W + ++ +P Sbjct: 133 --------ETAAILAVALNKIPVVTVMIREGTRALRPDLDDMARAFRMRPWARLRHVVLP 184 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 P + + +S W V+ E + + G+G I L D+ +L L Sbjct: 185 QLAPHVAASARAGISLIWKIVLVVEFLGRSN------GVGFKIHLLFSSFDVEGVLAWAL 238 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLE 273 + V+ D +L RP +N+++ + Sbjct: 239 AFVAVMLAIDLILLRPWESRANRWKQD 265 >gi|254458247|ref|ZP_05071673.1| nitrate ABC transporter, inner membrane subunit [Campylobacterales bacterium GD 1] gi|207085083|gb|EDZ62369.1| nitrate ABC transporter, inner membrane subunit [Campylobacterales bacterium GD 1] Length = 289 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 6/158 (3%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 QD + W ++ RV ++A ++ +P+G+++G + PF Q+ + Sbjct: 85 QDDKGIFWQIIASLKRVFAGFVLAILVGVPIGLFVGMSKSAQYALNPFIQIFKPVSPLAW 144 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWR 492 PL++ ++ ++ IF T W I+ N G + D+ VA + Sbjct: 145 LPLLLFIFQDINMT-----AISTIFITSIWPIIINTALGVKSVSEDYMNVAKVLRFSPLE 199 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 IILP PY TG + G AW + +E+ + G Sbjct: 200 KIVQIILPVSVPYIFTGMRLSLGIAWLVIVAAEMLTGG 237 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 8/146 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + V+++L S+ L P + I + + L +L + F ++ Sbjct: 100 RVFAGFVLAILVGVPIGLFVGMSKSAQYALNPFIQIFKPVSPLAWLPLLLFIFQDI---- 155 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + AI IF + +W + + + ++ D V++ R S +K + +P S+P Sbjct: 156 ----NMTAISTIFITSIWPIIINTALGVKSVSEDYMNVAKVLRFSPLEKIVQIILPVSVP 211 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216 + M +S+ W +VA+EM+ G Sbjct: 212 YIFTGMRLSLGIAWLVIVAAEMLTGG 237 >gi|312963731|ref|ZP_07778202.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas fluorescens WH6] gi|311281766|gb|EFQ60376.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas fluorescens WH6] Length = 262 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 23/212 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 R L + I L F+ L+A RL L + +++++P L + +++F Sbjct: 66 RAGLGFVIGGSIGLALGFITG-LSAWGERL---LDSSVQMIRNVPHLALIPLVILWFGID 121 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 K+ L +F I+ + Y + N+ L E+SRS+ LSG+ FW + +P Sbjct: 122 ETAKIFLVALGTLFPIY--------LNTYHGIRNVDPALVEMSRSYGLSGFSLFWQVILP 173 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILY 243 ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ + Sbjct: 174 GALPSILVGVRFALGFMWL------TLIVAETISASSGIG-YLAMNAREFLQTDVVVLAI 226 Query: 244 AMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274 M +LG + L + L R + W ++L++ Sbjct: 227 VMYAILGKLADLAARGLERVWLRWHPAYQLKK 258 >gi|296535218|ref|ZP_06897433.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296264457|gb|EFH10867.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 244 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 19/202 (9%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ ++AS+I +P+G+ +G + + +PF PA+ F PL++ Sbjct: 53 MTVWRVLGGFVLASVIAVPLGLAMGAYKGVEAFFEPFISFARYLPASAFIPLLILWAGVG 112 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L +F Q I+ VIAGA+ D E A + + +I+P P Sbjct: 113 EAQKLSVIFLGSVF--QIVIMVAVIAGATRI--DLVEAAYTLGARQGGILKRVIIPAAAP 168 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G AW IV+E+ +G+G I +S +++ G++++ Sbjct: 169 QVMEALRLVLGWAWTYVIVAELIG------AQSGIGHMIMDSQRLLDTGQMIFGIVVIGL 222 Query: 565 FVL-------ALNR--FLWHPL 577 L ALNR F W L Sbjct: 223 IGLVTDFLFKALNRRLFRWASL 244 >gi|70733908|ref|YP_257548.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348207|gb|AAY95813.1| probable permease of ABC transporter PA5095 [Pseudomonas fluorescens Pf-5] Length = 283 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +IS+L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATLISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|315924093|ref|ZP_07920319.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622495|gb|EFV02450.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 576 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A ++S++ L AK R +V+ PILD MQ++P +L V +F G V G Sbjct: 104 AALLSVVIGIPLGILMAKKDRAQVVIQPILDFMQTMPAFVYLIPAVAFF---GIGMVPGV 160 Query: 135 ELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 + IFA+ T + N+ + IPR+L E S +F + QK + + +P + M Sbjct: 161 FASIIFALPPTVRFTNL------GIREIPRELIEASDAFGSTSSQKLFKIELPLARNTIM 214 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 G+ +M+++S +VV ++I PG+G + A++ Sbjct: 215 AGINQTIMLALS-----------MVVTASMIGAPGLGRGVLSALQR 249 >gi|320177126|gb|EFW52141.1| Alkanesulfonates transport system permease protein [Shigella dysenteriae CDC 74-1112] gi|332093545|gb|EGI98603.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella boydii 3594-74] Length = 183 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 21 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 72 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 73 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 126 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 127 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 182 >gi|294085665|ref|YP_003552425.1| nitrate ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292665240|gb|ADE40341.1| nitrate ABC transporter, permease protein, putative [Candidatus Puniceispirillum marinum IMCC1322] Length = 277 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 4/140 (2%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+ ++A I+ IP G+ + + P ++L P + P + + ++ N Sbjct: 84 RVLAGFLVAMIVGIPFGLMLAVNKYFREIFFPPFEILRPIPPLAWVP---ASLIFWPTN- 139 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + ++ + G + I+ NV+ GA A + A S + W + IILPG P T Sbjct: 140 EMSIAFVTFLGAFFTIVINVLGGARAIDVRYLRAAQSMGASQWHLFYRIILPGTLPSIFT 199 Query: 509 GAITACGGAWNASIVSEVAS 528 GA G W + +E+ S Sbjct: 200 GAAVGMGITWEVVLAAEMIS 219 >gi|218688777|ref|YP_002396989.1| alkanesulfonate transporter permease subunit [Escherichia coli ED1a] gi|218426341|emb|CAR07166.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] Length = 263 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|282900985|ref|ZP_06308918.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] gi|281194076|gb|EFA69040.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] Length = 247 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 13/193 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V ++ A + +P GI +G ++ Q + + P+ V + Sbjct: 59 SLRRVFVGLLAAIGLGVPCGILLGLSRYLDQATSALFQFIRMISPLSWMPIAVMVLGIGD 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L + L+ W ++ N AG + + ++ T W +I+P I P+ Sbjct: 119 LP----VYFLLTIAAIWALILNTSAGVVSVDRRWLLLSKGLCATQWEMISQVIIPAIIPH 174 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI---M 562 +TG A G W + +E+ GLG YI + ++ ++ E++ VLI + Sbjct: 175 LLTGIRLAIGVIWIVLVPAEMLG------VNEGLGYYILNTRDRLAYSELMAVVLIIGLI 228 Query: 563 CCFVLALNRFLWH 575 CF+ RF H Sbjct: 229 GCFLDITLRFAQH 241 >gi|170733335|ref|YP_001765282.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169816577|gb|ACA91160.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 291 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + A++ I +G+ IG + + P ++L PA + PL + Sbjct: 96 SITRVLAGFVAAAVAGIGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAI------L 149 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ LS++ I G + IL N + GA A A S G + +ILPG Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAA 209 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P TG G AW + +E+ + + G+G + ES ++P++V+G+ ++ Sbjct: 210 PSIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALI 262 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 33/171 (19%), Positives = 71/171 (41%), Gaps = 8/171 (4%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P D+ + L LP + + R+L+ V + + + R L L+P Sbjct: 72 APSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIGRYRALEDTLLPP 131 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L++++ IP + ++ ++ F + +EL+ +F F ++ + + + Sbjct: 132 LEMLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 L +RS G + + +P + P + + + M WF +V +EMI Sbjct: 184 RLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIA 234 >gi|330807064|ref|YP_004351526.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375172|gb|AEA66522.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 283 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +IS+L L+A+S RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATLISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + WQ+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|116671627|ref|YP_832560.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter sp. FB24] gi|116611736|gb|ABK04460.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter sp. FB24] Length = 257 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 10/182 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+ V +I A +I + G+ IG + + ++P + A P V P+++ + Sbjct: 62 RLAVGVIAAIVIGVVGGVLIGSVRWLRALLEPTLEFFRAIPPPVLVPVLMLLMGIT---- 117 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + +++I G W +L N I G A + + ++ I GW RY++LP P + Sbjct: 118 DSMKVVVIISGCVWPVLLNTIEGVRAVDPVLSDSSHTYGIDGWARVRYLVLPSASPQIMA 177 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G + ++SE + ++GLG I + + PE+ G++++ + Sbjct: 178 GVRQSMSLGLILMVISE------MFASSSGLGFTIVQFQRSFAIPEMWSGIVVLGLLGVG 231 Query: 569 LN 570 ++ Sbjct: 232 MS 233 >gi|300362061|ref|ZP_07058238.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|300354680|gb|EFJ70551.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 515 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L AMVI++ F+ ++ + I I+Q+IP L L + + + Sbjct: 31 LLIAMVIAIPLAFILKG----HKKAAEFTLQIAGIIQTIPSLAILGLLLPFVGIGTTPAI 86 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 I L AI IF + Y L +IP +LEE + +F L+ W+K L +P +MP Sbjct: 87 IALVLYAIMPIFQN--------TYSGLTDIPDNLEEAATAFGLTKWKKLQRLEIPMAMP 137 >gi|160898108|ref|YP_001563690.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] gi|160363692|gb|ABX35305.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] Length = 399 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 28/188 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+++V ++ L A S R P+LD MQ+ P +L V+ F G V Sbjct: 188 VLTSLVFCMVIGLPAGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLF---GIGNV 244 Query: 132 IGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G + IFA+ ++ N+ + DL E SR++ S WQ W + +P +MP Sbjct: 245 PGVIVTIIFALPPLIRLTNLGIRQVRP------DLIEASRAYGASPWQLLWKVQLPLAMP 298 Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 G+ +M+S+S VV + MI VG G+G + I D+ A + Sbjct: 299 SIMAGVNQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLATV 344 Query: 247 TMLGVIFL 254 LG++ L Sbjct: 345 GGLGIVLL 352 >gi|238917329|ref|YP_002930846.1| sulfonate/nitrate/taurine transport system permease protein [Eubacterium eligens ATCC 27750] gi|238872689|gb|ACR72399.1| sulfonate/nitrate/taurine transport system permease protein [Eubacterium eligens ATCC 27750] Length = 254 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N + G + +E+A FHI R RYII+P + PY ++ G AW A + +E+ Sbjct: 143 NTLTGLRSTDKGIREMADVFHIPWIRRIRYIIMPQLSPYLISAGRVTAGMAWKAGVAAEI 202 >gi|324009885|gb|EGB79104.1| ABC transporter, permease protein [Escherichia coli MS 57-2] Length = 264 Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 102 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 154 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 208 GIG-YLAMNAREFLQMDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 263 >gi|251789059|ref|YP_003003780.1| nitrate ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537680|gb|ACT06301.1| nitrate ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 310 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 8/128 (6%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L + R + + PI+ +++ + L +L ++ F AE A+ + IF +W Sbjct: 142 LIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIW 193 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 M + + + IP+D V+R +LS + + +P +P ++ + +S+ W +V Sbjct: 194 PMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIV 253 Query: 209 ASEMIVVG 216 A+EM+ G Sbjct: 254 AAEMLTGG 261 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+++ IP G IG +++ P LL + P + + + Sbjct: 121 SLERVGIGFGLAALVGIPAGFLIGRFRFMAAMFNPIISLLRPVSPLAWLP--IGLLLFQR 178 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P S + + W ++ N G P D+ VA ++ + R I+LP + P Sbjct: 179 AEPAS--SWTIFICSIWPMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPS 236 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +TG + G AW + +E+ + G G+G +I + P +++ +L++ Sbjct: 237 VLTGVRLSIGIAWLVIVAAEMLTGG------IGIGFWIWNEWNNLNVPNIIIAILVI 287 >gi|84686551|ref|ZP_01014444.1| putative permease [Maritimibacter alkaliphilus HTCC2654] gi|84665464|gb|EAQ11941.1| putative permease [Rhodobacterales bacterium HTCC2654] Length = 296 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 26/197 (13%) Query: 68 TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +TL ++S A ++ + L ++S R+ ++ PILD+MQ+IP +L V M L Sbjct: 102 STLAIISVATILCIAIGIPIGILMSRSDRMQSIITPILDVMQTIPSFVYLIPVV---MLL 158 Query: 127 YPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GKV G I+AI ++ N+ + + D+ E + +F S QK + + V Sbjct: 159 GIGKVPGLIAVCIYAIPPIVRLTNLGIRLVDA------DVMEAADAFGASPRQKLFGVQV 212 Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 P ++P G+ +MM++S M+V+ ++I + G+G + AI Q L Sbjct: 213 PLALPNIFAGVNQTIMMALS----------MVVIA-SMIGVQGLGVPVLRAISNQYLALG 261 Query: 242 LYAMLTMLGVIFLYDQL 258 L L ++ + ++D++ Sbjct: 262 LMNGLAIVALAIIFDRV 278 >gi|296878635|ref|ZP_06902640.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Clostridium difficile NAP07] gi|296430442|gb|EFH16284.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Clostridium difficile NAP07] Length = 157 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L + +LLF + S+ VL P++D ++ +PI+ ++ T+V+F Sbjct: 25 TLQRVLKGFIYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFG--- 81 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG + IF I S V+ + + Q + I +D +RS S F + +P Sbjct: 82 ----IG-DGPTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIIPA 136 Query: 188 SMPGLVWNMMMSMSGGWFFVV 208 S+P ++ +++S GW V+ Sbjct: 137 SLPDILTGSRIAISTGWMSVI 157 >gi|254247922|ref|ZP_04941243.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Burkholderia cenocepacia PC184] gi|124872698|gb|EAY64414.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Burkholderia cenocepacia PC184] Length = 291 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + A++ I +G+ IG + + P ++L PA + PL + Sbjct: 96 SITRVLAGFVAAAVAGIGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAI------L 149 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ LS++ I G + IL N + GA A A S G + +ILPG Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAA 209 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P TG G AW + +E+ + + G+G + ES ++P++V+G+ ++ Sbjct: 210 PSIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALI 262 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 33/171 (19%), Positives = 71/171 (41%), Gaps = 8/171 (4%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P D+ + L LP + + R+L+ V + + + R L L+P Sbjct: 72 APADVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIGRYRALEDTLLPP 131 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L++++ IP + ++ ++ F + +EL+ +F F ++ + + + Sbjct: 132 LEMLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 L +RS G + + +P + P + + + M WF +V +EMI Sbjct: 184 RLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIA 234 >gi|317405287|gb|EFV85615.1| nitrate transport system permease [Achromobacter xylosoxidans C54] Length = 280 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 12/199 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++A+++ IP+G IG + PF Q+L + PL + + Sbjct: 92 SVARVLTGFLLAALVAIPLGFLIGMSRTVYRAFDPFIQVLKPISPLAWMPLALYTIKDAD 151 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G A D+ VA + ++ R +ILP P Sbjct: 152 TS-----AIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALLVILPAAAP 206 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S ++ +L + Sbjct: 207 TIMTGMRISVGIAWLVIVAAEMLIGG------TGIGYFVWNEWNNLSIANIICAILFIGL 260 Query: 565 FVLALNRFLWHPLYLYGTR 583 + L+ L L R Sbjct: 261 IGMLLDTVLARAARLVSYR 279 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 14/191 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L+ +++ L L SR + P + +++ I L ++ + + Sbjct: 95 RVLTGFLLAALVAIPLGFLIGMSRTVYRAFDPFIQVLKPISPLAWMPLALYTIKD----- 149 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A+ +AIF IF +W M + + + +D V+R+ +S + + +P + P Sbjct: 150 ---ADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALLVILPAAAP 206 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ M +S+ W +VA+EM++ G GIG ++ + I+ A+L + Sbjct: 207 TIMTGMRISVGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSIANIICAILFIGL 260 Query: 251 VIFLYDQLLFR 261 + L D +L R Sbjct: 261 IGMLLDTVLAR 271 >gi|291612628|ref|YP_003522785.1| binding-protein-dependent transport systems inner membrane component [Sideroxydans lithotrophicus ES-1] gi|291582740|gb|ADE10398.1| binding-protein-dependent transport systems inner membrane component [Sideroxydans lithotrophicus ES-1] Length = 333 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 20/201 (9%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G + I Y TY D ++ +++ V V + +II +P+GI G I + Sbjct: 107 GQQFDEIKY-TGQPTYLDQIFT------SLYTVFVGFFLGTIIAVPLGILCGLNKTIQAA 159 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLSLLM-----IFGTQWYILFNVIA 470 + P Q+ + P+V VS Y +P S L+ + W L N Sbjct: 160 LNPLIQIFRPVSPLAWLPIVTLVVSALYVSADPMFAKSFLISAITVTLCSMWPTLVNTAL 219 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G ++ D V+ ++ I++P TG + G AW I +E+ + Sbjct: 220 GVASIDKDLLNVSKVLRLSTSTKVMKIVIPSSLKLIFTGMRLSLGVAWMVLIAAEMLA-- 277 Query: 531 HIHLRTTGLGAYIAESTEKGS 551 + GLG ++ + + GS Sbjct: 278 ----QNPGLGKFVWDEFQNGS 294 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 9/105 (8%) Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +I +DL VS+ RLS K + +P S+ + M +S+ W ++A+EM+ Sbjct: 221 VASIDKDLLNVSKVLRLSTSTKVMKIVIPSSLKLIFTGMRLSLGVAWMVLIAAEMLAQN- 279 Query: 218 TVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLL 259 PG+G ++ + Q L I+ A+ T+ V FL D+ + Sbjct: 280 -----PGLGKFVWDEFQNGSSQSLERIMVAVFTIGFVGFLLDRTM 319 >gi|254475309|ref|ZP_05088695.1| choline ABC transporter, permease protein [Ruegeria sp. R11] gi|214029552|gb|EEB70387.1| choline ABC transporter, permease protein [Ruegeria sp. R11] Length = 276 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 72/144 (50%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + +LSA ++ + AA RL + + P+LD+MQ++P +L +V+ Sbjct: 91 EETTESLTLVLSACLVCMAIGVPIGIAAAHRPRLFVAMRPVLDLMQTLPTFVYLIPAIVF 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A + + + + +T + + + P+ L E + +F + Q W Sbjct: 151 FGIGMVPGLI-----ATVIFVLPAPI-RLT---HLGVSSTPKPLLEAAEAFGATKSQTLW 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 202 KVELPYALPQIMTGLNQTIMLSLS 225 >gi|158422385|ref|YP_001523677.1| nitrate ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329274|dbj|BAF86759.1| nitrate ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 284 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 12/179 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A + IP+G IG P +S + PF Q+L + PL + + ++ ++ Sbjct: 106 LAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSIS-----AVF 160 Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +IF + W +L N G ++ ++ VA + + + +ILP P +TG + Sbjct: 161 VIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISI 220 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G AW + +E+ G TG+G ++ S V++ +L++ + L++ L Sbjct: 221 GIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSITNVIIAILVIGVVGMVLDQIL 273 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 6/126 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + ++A+F IF VW M + + ++ ++ V+R+ + ++ + + +P + P ++ Sbjct: 154 SSISAVFVIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTIL 213 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +S+ W +VA+EM+V G GIG ++ + ++ A+L + V Sbjct: 214 TGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILVIGVVGM 267 Query: 254 LYDQLL 259 + DQ+L Sbjct: 268 VLDQIL 273 >gi|187779975|ref|ZP_02996448.1| hypothetical protein CLOSPO_03571 [Clostridium sporogenes ATCC 15579] gi|187773600|gb|EDU37402.1| hypothetical protein CLOSPO_03571 [Clostridium sporogenes ATCC 15579] Length = 253 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 5/164 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ I+I+ + I +GI G + ++P + A P V ++++ V + Sbjct: 68 SILRVITGILISIALGISLGIIAGINVFMEELLEPLIVTIKATP--VMSIIIIALVWFKS 125 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ S+LM F I NV++G + E+A+ + + I LP PY Sbjct: 126 SSVAIFTSILMCFPI---IYTNVLSGIKSVDKKLLEMANLYKVKNKYILTNIYLPSTKPY 182 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 ++G + G W S+ SE+ S + L A +TE+ Sbjct: 183 IISGILMCLGIGWKVSVASEILSTPKYSIGLNLLNAKAILATEE 226 >gi|15887513|ref|NP_353194.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15155040|gb|AAK85979.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 257 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 6/143 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV ++AS+I +PVGI +G I + ++PF PA+ F PL++ Sbjct: 66 MTIWRVVGGFVLASLIAVPVGIAMGAYKPIEALLEPFVSFARYLPASAFVPLLILWAGIG 125 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+IF G + I+ V + D E A + R +++P Sbjct: 126 EMQ-----KLLVIFIGAVFQIILMVAVAVAGTRRDLVEAAYTLGAKDRGVVRRVLIPANA 180 Query: 504 PYYVTGAITACGGAWNASIVSEV 526 P G AW IV+E+ Sbjct: 181 PDIAEILRLVLGWAWTYVIVAEL 203 >gi|333008553|gb|EGK28021.1| taurine transport system permease protein tauC [Shigella flexneri VA-6] Length = 279 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIVQALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------VTRGLGFMVQSAGE 235 Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust. Identities = 30/153 (19%), Positives = 73/153 (47%), Gaps = 8/153 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R++ A++ +++ S + +L P++++ + +P L +L V++ Sbjct: 78 QHLAASLTRIVQALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + + + ++S S Q W+ Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWF 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P ++P ++ + + + GW +VA+E+I V Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELIAV 222 >gi|315083476|gb|EFT55452.1| ABC transporter, permease protein [Propionibacterium acnes HL027PA2] Length = 288 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113 V S+ Q+ T++ L+ +V++++ + A AAKS+R ++ PILD MQ++P L Sbjct: 84 VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L +V F G+V GA IFA+ + F+ + + + E +F Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPPG----VRFTEL-GIRGVDTETVEAGAAFG 193 Query: 174 LSGWQKFWYLGVPFSMP 190 S W + +P +MP Sbjct: 194 ASPRHILWRIQMPLAMP 210 >gi|284046292|ref|YP_003396632.1| binding-protein-dependent transporters inner membrane component [Conexibacter woesei DSM 14684] gi|283950513|gb|ADB53257.1| binding-protein-dependent transport systems inner membrane component [Conexibacter woesei DSM 14684] Length = 288 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 21/204 (10%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L + +L+F V L A + +V+ P ++ ++++P L + + +++F Sbjct: 100 RILRGVGFALVFGVVLGLLLATVKPFRVVVEPYVNFVRALPPLAYFSLLIIWFGI----- 154 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + + ++ +F + + S+ + I R+ + +R+ WQ ++ +P +P Sbjct: 155 ---EDTSKVWLLFLAAFPPIALSVLSGVQGIRRERIDAARALGAGRWQVVRFVTLPSVLP 211 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILYAMLTM 248 L +++ W +VA+E TV +PGIG +A A K +Q +A+L + Sbjct: 212 ELFTGTRLALGFAWTTIVAAE------TVDGIPGIGG-LAWATKKFQQTDVAVLCIIAIG 264 Query: 249 LGVIFLYDQL---LFRPMIVWSNK 269 L I L DQL L + ++ W K Sbjct: 265 LTAIVL-DQLVKQLEKRVVPWRGK 287 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P+ + A P +F L++ + +WL L F I +V++G Sbjct: 129 VEPYVNFVRALPPLAYFSLLIIWFGIEDTS-KVWLLFLAAFPP---IALSVLSGVQGIRR 184 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 + + A + W+ R++ LP + P TG A G AW + +E Sbjct: 185 ERIDAARALGAGRWQVVRFVTLPSVLPELFTGTRLALGFAWTTIVAAE 232 >gi|152985321|ref|YP_001347063.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150960479|gb|ABR82504.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 274 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 14/201 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV I S + + VG W+G + ++P Q L A P+ + PL++ Sbjct: 77 SLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDE 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + +L++ G + + ++AG + E+ + ++ + R I+LP P Sbjct: 137 -TPKI---VLIVLGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPN 192 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A +W + +E+ + T GLG +++ E S P++V+ +++ Sbjct: 193 LFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET-SRPDLVIAAILVLAT 245 Query: 566 VLALNRFLWHPLYLYGTRCLR 586 + L+ L L R LR Sbjct: 246 LGKLSDGLLRSLE---RRALR 263 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 17/206 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + I T SRR L P +++IP L ++ +++F K Sbjct: 80 RVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPK 139 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ L A F ++ ++ + + R E+ R +RLS + + +P ++P Sbjct: 140 IVLIVLGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALP 191 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 L + ++S W F+VA+E+I G+G ++ + ++ A+L + Sbjct: 192 NLFTGLRGALSLSWMFLVAAELIAATQ------GLGYLLSDGRETSRPDLVIAAILVLAT 245 Query: 251 VIFLYDQLLF---RPMIVWSNKFRLE 273 + L D LL R + W + F E Sbjct: 246 LGKLSDGLLRSLERRALRWRDSFDGE 271 >gi|239815502|ref|YP_002944412.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239802079|gb|ACS19146.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 383 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+++V ++ L A S R ++ P+LD MQ+ P +L V+ F G V Sbjct: 160 LTSLVFCMIIGLPLGVLLASSDRAQRLMRPVLDAMQTTPAFVYLVPVVMLF---GIGNVP 216 Query: 133 GAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 G + IFA+ ++ N+ L + DL E +R++ S WQ + +P +MP Sbjct: 217 GVIVTIIFALAPLVRLTNL------GLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPS 270 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 271 IMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 310 >gi|221198985|ref|ZP_03572030.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] gi|221205245|ref|ZP_03578261.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221175036|gb|EEE07467.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221181436|gb|EEE13838.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] Length = 292 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L + +LF FV T AA S R G L+ +L M +P + L +++F L G Sbjct: 99 LLRGYALGVLFAFVL-TSAAVSTRFGRDLLAMLTSMFNPLPSIALLPIALLWF-GLGTGS 156 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + + +W + +MY +P L R++ L+G ++ + VP ++P Sbjct: 157 LL-------FVLVHAVLWPLALNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALP 209 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 210 SILSGLRVGWAFAWRTLIAAELV 232 >gi|222102563|ref|YP_002539602.1| ABC transporter membrane spanning protein (aliphatic sulphonate) [Agrobacterium vitis S4] gi|221739164|gb|ACM39897.1| ABC transporter membrane spanning protein (aliphatic sulphonate) [Agrobacterium vitis S4] Length = 272 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 6/143 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RVV+ I + + + +G+ +G P I+P LA P + PL++ V Sbjct: 79 VSLRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALAQIPTLGWIPLLMLLVGIE 138 Query: 445 HLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L +++I + + N +G ++E+ SF + W+ R I+LP Sbjct: 139 ET-----LKIIIIAKGAFVPVTLNTFSGIRNVSVKYREIGRSFRFSPWQQLRLIVLPAAA 193 Query: 504 PYYVTGAITACGGAWNASIVSEV 526 P TG AW + + E+ Sbjct: 194 PTIFTGIRYGLTNAWTSLVGVEL 216 >gi|322833097|ref|YP_004213124.1| nitrate ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168298|gb|ADW73997.1| nitrate ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 304 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A++I IP G IG I+S + P LL + P + Sbjct: 110 WNVLASLKRVAMGFGLAALIGIPAGFLIGRFSFIASMLNPIISLLRPVSPLAWLP--IGL 167 Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + P S IF + W ++ N G P D+ VA ++ + R I+ Sbjct: 168 LLFQRAEPA---SAWTIFICSIWPMILNTAEGVMRIPQDYLNVARVLKLSEFTVMRKILF 224 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P + PY +TG + G AW + +E+ + G G+G +I + +++ + Sbjct: 225 PAVLPYILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVENIIIAI 278 Query: 560 LIMCCFVLALNRFL 573 L++ + L + L Sbjct: 279 LLIGVVGMVLEQGL 292 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 8/118 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L PI+ +++ + L +L ++ F AE A+ + IF +W M + + + Sbjct: 146 MLNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASAWTIFICSIWPMILNTAEGV 197 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 IP+D V+R +LS + + P +P ++ + +S+ W +VA+EM+ G Sbjct: 198 MRIPQDYLNVARVLKLSEFTVMRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGG 255 >gi|227503840|ref|ZP_03933889.1| ABC superfamily ATP binding cassette transporter ABC protein [Corynebacterium striatum ATCC 6940] gi|227199664|gb|EEI79712.1| ABC superfamily ATP binding cassette transporter ABC protein [Corynebacterium striatum ATCC 6940] Length = 561 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 27/241 (11%) Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 V +A + W +G +V + D+L V T+ V+ ++A+ + + + +W+ Sbjct: 29 VVALATRVPWSRLGAVVGQDSTHDLLRV------TLSSAVLATVLATFLGVGLAMWLHGL 82 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG----------TQ 461 H+ ++ L A P V + + + L L +L + F T Sbjct: 83 KHMGQAVRLLVYLPLAMPPVVGGLALSAALGRRGLLAPLLDALHLKFAFAFAGVVTAHTF 142 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITG---WRWWRYIILPGIFPYYVTGAITACG--- 515 + F V+A SA + +EV++S G W W+ I LP I P TGA+ AC Sbjct: 143 VALPFVVVAVDSALRHIDQEVSTSARRVGMSRWAVWQKITLPTIAPSIFTGAVLACARSL 202 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAE--STEKG-SFPEVVLGVLIMCCFVLALNRF 572 G + +I ++ G RT G Y+ ST+ + V++G+ ++C + L Sbjct: 203 GEFGTTITFAGSAPGIT--RTMSSGIYLEREVSTDNAYALSAVLIGLAVLCLALAGLPTL 260 Query: 573 L 573 L Sbjct: 261 L 261 >gi|241205709|ref|YP_002976805.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859599|gb|ACS57266.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 280 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +RRL + P L ++SIP + ++ +++F KV + F ++ Sbjct: 113 ARRL---IDPSLQALRSIPSIAWVPLFILWFGIFETSKVALIAVGVFFPVY--------L 161 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + ++ ++ R + EV R FRLSG+ + +P P V + + GW FVVA+E Sbjct: 162 GISGAILSVDRKIVEVGRIFRLSGFTLVRRVMLPAVFPAYVTALRSGLGLGWMFVVAAEF 221 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269 + + G+G + + I+ A++ V L D LL P + W + Sbjct: 222 MGASE------GLGYLLVDGQQMGKPDQIMAAIIAFAVVGKLTDSLLLAATTPFLTWQDS 275 Query: 270 FRLE 273 +R E Sbjct: 276 YRRE 279 >gi|110678330|ref|YP_681337.1| taurine ABC transporter, permease protein [Roseobacter denitrificans OCh 114] gi|109454446|gb|ABG30651.1| taurine ABC transporter, permease protein [Roseobacter denitrificans OCh 114] Length = 422 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++ +++ IP+G +G P + + P PLV+ Sbjct: 231 SLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 290 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + +G S A S + W+ RY+I+P P Sbjct: 291 SGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQIMRYVIVPNSLPE 346 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGA A G W + +E+ + G G I +++ + V++G++++ Sbjct: 347 IFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTDIVIMGIILIGVI 400 Query: 566 VLALNRFL 573 ++ + Sbjct: 401 GFGIDMLM 408 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 19/172 (11%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++ GK+I +F + +W M + + + Sbjct: 265 PIVEFMRPVPPLALIPLVIIWAGIGESGKII--------LLFLAALWIMAIAARSGVSGV 316 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ Y+ VP S+P + ++M W VVA+E++ Sbjct: 317 KISKVHAAYSLGASKWQIMRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAAEQ---- 372 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL---FRPMIVWSNK 269 G G I A K Q+ ++ ++ ++GVI F D L+ R ++ W K Sbjct: 373 --GAGMMIMTASKFQNTDIVIMGII-LIGVIGFGIDMLMRWAERILVPWKGK 421 >gi|308188379|ref|YP_003932510.1| Taurine transport permease protein tauC [Pantoea vagans C9-1] gi|308058889|gb|ADO11061.1| Taurine transport permease protein tauC [Pantoea vagans C9-1] Length = 275 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 11/165 (6%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVGI +G P + P ++ P + PL+V + + L L IF Sbjct: 99 IPVGILMGLSPVARGLLDPLIEIYRPIPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 156 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + + +AG A S W+ R++ILPG P +TG G W+ Sbjct: 157 --VTLSTLAGVRNTQQVRIRAARSLGANRWQLLRWVILPGALPEILTGLRIGLGVGWSTL 214 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 + +E+ + T GLG ++ +S + +VVL + + F+ Sbjct: 215 VAAELIA------ATRGLG-FMVQSAGEFLATDVVLAGIAVIAFI 252 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 8/117 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P+++I + IP L +L V++F IG E + I I+ + +T S + Sbjct: 114 LLDPLIEIYRPIPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLSTLAGV 165 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 N + +RS + WQ ++ +P ++P ++ + + + GW +VA+E+I Sbjct: 166 RNTQQVRIRAARSLGANRWQLLRWVILPGALPEILTGLRIGLGVGWSTLVAAELIAA 222 >gi|314981894|gb|EFT25987.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA3] Length = 288 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113 V S+ Q+ T++ L+ +V++++ + A AAKS+R ++ PILD MQ++P L Sbjct: 84 VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L +V F G+V GA IFA+ + F+ + + + E +F Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPPG----VRFTEL-GIRGVDTETVEAGAAFG 193 Query: 174 LSGWQKFWYLGVPFSMP 190 S W + +P +MP Sbjct: 194 ASPRHILWRIQMPLAMP 210 >gi|262041819|ref|ZP_06015004.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040811|gb|EEW41897.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 294 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 139 PLIALLRLVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 190 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 191 PQDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%) Query: 373 YQD---VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 YQD + + W ++ RV V +A++ IP+G IG + P LL Sbjct: 89 YQDGPNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRLVS 148 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + P + + + P S + + W ++ N G P D+ VA ++ Sbjct: 149 PLAWLP--IGLLLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLS 204 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 W R I+ P + P +TG + G AW + +E+ + G Sbjct: 205 EWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 245 >gi|295399447|ref|ZP_06809429.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] gi|294978913|gb|EFG54509.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] Length = 279 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 10/180 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++FR V ++ + I + GI +GF + P Q+L P PL + + Sbjct: 83 VSVFRAVAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + LL+ G + + N G +VA H + W+ +I+P P Sbjct: 143 ETSK----VLLIAKGAFFPVYVNTFIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 ++G + G AW +V+E+ T G+G + ++ + + V +G+++ Sbjct: 199 AILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAV 252 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 84/183 (45%), Gaps = 19/183 (10%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S + VL P + ++++IP L +++F KV+ A F ++ + Sbjct: 109 STKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFGETSKVLLIAKGAFFPVYVNT------ 162 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + + L +V+R S W+K L VP ++P ++ + +S+ W +V +E+ Sbjct: 163 --FIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALPAILSGIRLSLGAAWLGLVVAEL 220 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQL---LFRPMIVWSN 268 + G T GIG Y+ + ++ I++ + + V+ L D L L + ++ W + Sbjct: 221 M--GST----EGIG-YMMMDARQFSNTDIVFVGIILFAVVGKLTDSLVRVLEKRLLRWQD 273 Query: 269 KFR 271 ++ Sbjct: 274 TYK 276 >gi|254425440|ref|ZP_05039158.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335] gi|196192929|gb|EDX87893.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335] Length = 298 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 12/183 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+ A+++ IPVG+ +G + S + F + P F PL++ + Sbjct: 108 RVIAGFTFAALVGIPVGLAMGTFYSMDSLLGGFIRTARYLPIAAFVPLIIIWAGIDEASK 167 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAF-PNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + + L ++F +IA A F PN+ VA + T W +ILP P + Sbjct: 168 IIIIFLGIVFYNA-----TMIADAVKFIPNETLNVAYTLGATRWDVVHRVILPATLPSIL 222 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 GAWN ++SE+ + GLG I S + +LI+C L Sbjct: 223 DTLRVNVAGAWNFLVLSELIA------AENGLGFTIVRSQRYLQTDRAMFCILIICLIGL 276 Query: 568 ALN 570 A + Sbjct: 277 ATD 279 >gi|50842954|ref|YP_056181.1| glycine betaine transport system permease protein [Propionibacterium acnes KPA171202] gi|289426537|ref|ZP_06428280.1| ABC transporter, permease protein [Propionibacterium acnes SK187] gi|289428625|ref|ZP_06430308.1| ABC transporter, permease protein [Propionibacterium acnes J165] gi|295131025|ref|YP_003581688.1| ABC transporter, permease protein [Propionibacterium acnes SK137] gi|50840556|gb|AAT83223.1| glycine betaine transport system permease protein [Propionibacterium acnes KPA171202] gi|289153265|gb|EFD01983.1| ABC transporter, permease protein [Propionibacterium acnes SK187] gi|289158023|gb|EFD06243.1| ABC transporter, permease protein [Propionibacterium acnes J165] gi|291376273|gb|ADE00128.1| ABC transporter, permease protein [Propionibacterium acnes SK137] gi|313773548|gb|EFS39514.1| ABC transporter, permease protein [Propionibacterium acnes HL074PA1] gi|313794006|gb|EFS42030.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA1] gi|313801392|gb|EFS42643.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA2] gi|313807928|gb|EFS46409.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA2] gi|313811601|gb|EFS49315.1| ABC transporter, permease protein [Propionibacterium acnes HL083PA1] gi|313813338|gb|EFS51052.1| ABC transporter, permease protein [Propionibacterium acnes HL025PA1] gi|313816791|gb|EFS54505.1| ABC transporter, permease protein [Propionibacterium acnes HL059PA1] gi|313819714|gb|EFS57428.1| ABC transporter, permease protein [Propionibacterium acnes HL046PA2] gi|313822180|gb|EFS59894.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA1] gi|313823586|gb|EFS61300.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA2] gi|313825910|gb|EFS63624.1| ABC transporter, permease protein [Propionibacterium acnes HL063PA1] gi|313829590|gb|EFS67304.1| ABC transporter, permease protein [Propionibacterium acnes HL063PA2] gi|313831343|gb|EFS69057.1| ABC transporter, permease protein [Propionibacterium acnes HL007PA1] gi|313834953|gb|EFS72667.1| ABC transporter, permease protein [Propionibacterium acnes HL056PA1] gi|313839886|gb|EFS77600.1| ABC transporter, permease protein [Propionibacterium acnes HL086PA1] gi|314924669|gb|EFS88500.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA3] gi|314962061|gb|EFT06162.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA2] gi|314963640|gb|EFT07740.1| ABC transporter, permease protein [Propionibacterium acnes HL082PA1] gi|314968528|gb|EFT12626.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA1] gi|314974218|gb|EFT18314.1| ABC transporter, permease protein [Propionibacterium acnes HL053PA1] gi|314976672|gb|EFT20767.1| ABC transporter, permease protein [Propionibacterium acnes HL045PA1] gi|314978843|gb|EFT22937.1| ABC transporter, permease protein [Propionibacterium acnes HL072PA2] gi|314984311|gb|EFT28403.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA1] gi|314986498|gb|EFT30590.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA2] gi|314990857|gb|EFT34948.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA3] gi|315079494|gb|EFT51487.1| ABC transporter, permease protein [Propionibacterium acnes HL053PA2] gi|315081279|gb|EFT53255.1| ABC transporter, permease protein [Propionibacterium acnes HL078PA1] gi|315087163|gb|EFT59139.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA3] gi|315089333|gb|EFT61309.1| ABC transporter, permease protein [Propionibacterium acnes HL072PA1] gi|315095357|gb|EFT67333.1| ABC transporter, permease protein [Propionibacterium acnes HL038PA1] gi|315099239|gb|EFT71215.1| ABC transporter, permease protein [Propionibacterium acnes HL059PA2] gi|315106798|gb|EFT78774.1| ABC transporter, permease protein [Propionibacterium acnes HL030PA1] gi|315109038|gb|EFT81014.1| ABC transporter, permease protein [Propionibacterium acnes HL030PA2] gi|327328380|gb|EGE70142.1| glycine betaine/L-proline ABC transporter, permease protein [Propionibacterium acnes HL096PA2] gi|327329753|gb|EGE71509.1| glycine betaine/L-proline ABC transporter, permease protein [Propionibacterium acnes HL096PA3] gi|327334271|gb|EGE75985.1| glycine betaine/L-proline ABC transporter, permease protein [Propionibacterium acnes HL097PA1] gi|327444165|gb|EGE90819.1| ABC transporter, permease protein [Propionibacterium acnes HL043PA2] gi|327444954|gb|EGE91608.1| ABC transporter, permease protein [Propionibacterium acnes HL043PA1] gi|327446439|gb|EGE93093.1| ABC transporter, permease protein [Propionibacterium acnes HL013PA2] gi|327451973|gb|EGE98627.1| ABC transporter, permease protein [Propionibacterium acnes HL092PA1] gi|328752194|gb|EGF65810.1| ABC transporter, permease protein [Propionibacterium acnes HL020PA1] gi|328760038|gb|EGF73618.1| glycine betaine/L-proline ABC transporter, permease protein [Propionibacterium acnes HL099PA1] gi|332675905|gb|AEE72721.1| glycine betaine/L-proline transport system permease protein ProW [Propionibacterium acnes 266] Length = 288 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113 V S+ Q+ T++ L+ +V++++ + A AAKS+R ++ PILD MQ++P L Sbjct: 84 VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L +V F G+V GA IFA+ + F+ + + + E +F Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPP----GVRFTEL-GIRGVDTETVEAGAAFG 193 Query: 174 LSGWQKFWYLGVPFSMP 190 S W + +P +MP Sbjct: 194 ASPRHILWRIQMPLAMP 210 >gi|255516844|ref|ZP_05384520.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-97b34] Length = 229 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 40/196 (20%), Positives = 88/196 (44%), Gaps = 25/196 (12%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+++ +I+S++ IP+G+ G + +P + + + P P+++ Sbjct: 38 RILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 87 Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 LW + ++I + + I N + G N EV SF+++ R + II+P Sbjct: 88 -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPN 146 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 V G G ++ A I +E+ + ++GLG I++ + V++G+ + Sbjct: 147 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 200 Query: 562 MCCFVLALNRFLWHPL 577 + F+ L+ +L+ + Sbjct: 201 I-GFLGILSDYLFSKI 215 >gi|310659580|ref|YP_003937301.1| ABC transporter permease [Clostridium sticklandii DSM 519] gi|308826358|emb|CBH22396.1| putative ABC transporter, permease protein [Clostridium sticklandii] Length = 254 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 69/143 (48%), Gaps = 5/143 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV + +I++ I+ I VGI G + + P + + P F ++++ + + Sbjct: 64 SVYRVGLGVILSIILGIAVGIISGMNDLVYEILNPAMVAIKSTPVMSF--IILALIWFSS 121 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N +++ LM F W N +AG E+A + ++ + + I L + PY Sbjct: 122 TNSPIFICFLMCFPLVWT---NTVAGIRNVDKKLLEMAHIYDVSKKQIIKKIYLLSLKPY 178 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 +V+ ++ A G W ++ +EV S Sbjct: 179 FVSSSVQALGLGWKVTVAAEVLS 201 >gi|157145548|ref|YP_001452867.1| hypothetical protein CKO_01291 [Citrobacter koseri ATCC BAA-895] gi|157082753|gb|ABV12431.1| hypothetical protein CKO_01291 [Citrobacter koseri ATCC BAA-895] Length = 293 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 138 PLIALLRPVSPLAWLPIGLLLFQK--------AEPASSWTIFICSIWPMVINTAEGVRRI 189 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +L W + P +P ++ + +S+ W +VA+EM+ G Sbjct: 190 PQDYLNVARVLQLPEWTVMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG 244 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 18/203 (8%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ IP+G IG S P LL + P + Sbjct: 99 WNVLASLQRVAIGFGLAALVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAWLP--IGL 156 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + P S + + W ++ N G P D+ VA + W R I+ P Sbjct: 157 LLFQKAEPAS--SWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLPEWTVMRRILFP 214 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV----- 555 + P +TG + G AW + +E+ + G G+G +I + + Sbjct: 215 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 268 Query: 556 ---VLGVLIMCCFVLALNRFLWH 575 V+G+L+ +L RF W Sbjct: 269 IIGVVGLLLEQGLMLVARRFSWQ 291 >gi|317970089|ref|ZP_07971479.1| binding-protein-dependent transport systems inner membrane component [Synechococcus sp. CB0205] Length = 253 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV + +++ + +P+GI +G P I ++P L+ PA F PL+ + Y+ L+ Sbjct: 67 RVFIGFAMSAGLALPLGILMGTNPVICRLLEPLMGLIRYMPAPAFIPLL---IIYFGLD- 122 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L LL+ GT ++ ++ P + E A + ++ P I P + Sbjct: 123 ELPKVLLIFIGTFFFNTLMIMDSVKFVPRELVETAMTLGGRTMPILTRVVAPFIAPQVLD 182 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 AWN IV+E+ + T GLG I+ + E+ +G++++ L Sbjct: 183 AYRINMASAWNLVIVAELVA------ATEGLGKRISLAQRFLRTDEIFMGLIVIGLIGLV 236 Query: 569 LN 570 ++ Sbjct: 237 ID 238 >gi|313763611|gb|EFS34975.1| ABC transporter, permease protein [Propionibacterium acnes HL013PA1] gi|314914766|gb|EFS78597.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA4] gi|314919272|gb|EFS83103.1| ABC transporter, permease protein [Propionibacterium acnes HL050PA1] gi|314920817|gb|EFS84648.1| ABC transporter, permease protein [Propionibacterium acnes HL050PA3] gi|314930496|gb|EFS94327.1| ABC transporter, permease protein [Propionibacterium acnes HL067PA1] gi|314954346|gb|EFS98752.1| ABC transporter, permease protein [Propionibacterium acnes HL027PA1] gi|314957469|gb|EFT01572.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA1] gi|315100454|gb|EFT72430.1| ABC transporter, permease protein [Propionibacterium acnes HL046PA1] gi|327454990|gb|EGF01645.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA3] gi|327457721|gb|EGF04376.1| ABC transporter, permease protein [Propionibacterium acnes HL083PA2] gi|328755176|gb|EGF68792.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA1] gi|328758344|gb|EGF71960.1| ABC transporter, permease protein [Propionibacterium acnes HL025PA2] Length = 288 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113 V S+ Q+ T++ L+ +V++++ + A AAKS+R ++ PILD MQ++P L Sbjct: 84 VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L +V F G+V GA IFA+ + F+ + + + E +F Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPP----GVRFTEL-GIRGVDTETVEAGAAFG 193 Query: 174 LSGWQKFWYLGVPFSMP 190 S W + +P +MP Sbjct: 194 ASPRHILWRIQMPLAMP 210 >gi|307131963|ref|YP_003883979.1| Urea carboxylase-related ABC transporter permease [Dickeya dadantii 3937] gi|306529492|gb|ADM99422.1| Urea carboxylase-related ABC transporter, permease protein [Dickeya dadantii 3937] Length = 262 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ RVV ++A++I +P+GI +G + + +PF PA+ F PL++ Sbjct: 71 MTVMRVVAGFLLAALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIG 130 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+IF G+ + I+ V A D E A + + +++PG Sbjct: 131 EMQ-----KILVIFIGSFFQIVLMVAVSVGAARRDLVEAAYTLGCSNRSVVTRVLIPGAA 185 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 186 PDIAELLRLVLGWAWTYVIVAELIG------ASSGIGHMIVDS 222 >gi|296451763|ref|ZP_06893490.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296880165|ref|ZP_06904132.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296259397|gb|EFH06265.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296428890|gb|EFH14770.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 256 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 24/181 (13%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+++ +I+S++ IP+G+ G + +P + + + P P+++ Sbjct: 65 RILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLI---------- 114 Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 LW + ++I + + I N + G N EV SF+++ R + II+P Sbjct: 115 -LWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSRKRIFYKIIIPN 173 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 V G G ++ A I +E+ + ++GLG I++ + V++G+ + Sbjct: 174 SMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFV 227 Query: 562 M 562 + Sbjct: 228 I 228 >gi|254502512|ref|ZP_05114663.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222438583|gb|EEE45262.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 278 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 29/200 (14%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R ++ + + + V L A+S R+ ++ P+LD+MQ++P +L V+ Sbjct: 81 EDTMRTIAMVTVCTMMAIVLGIPLGILMARSDRIQSIINPVLDLMQTMPSFVYLIPVVMI 140 Query: 123 FMNLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F GKV G I+AI ++ N+ + + D+ E + +F S WQK Sbjct: 141 F---GLGKVPGMIAVVIYAIPPMIRLTNLGIRLVDT------DVLEAADAFGSSSWQKLT 191 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P ++P G+ +MM+++ M+VV +I + G+G + AI Q Sbjct: 192 NVQLPLALPTIMAGVNQTIMMALA----------MVVVA-ALIGVKGLGQPVLNAIANQY 240 Query: 238 LLAILYAMLTMLGVIFLYDQ 257 L + L ++ + ++D+ Sbjct: 241 LTMGVMNGLAIVAIAIIFDR 260 >gi|163732636|ref|ZP_02140081.1| taurine ABC transporter, permease protein [Roseobacter litoralis Och 149] gi|161393996|gb|EDQ18320.1| taurine ABC transporter, permease protein [Roseobacter litoralis Och 149] Length = 422 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++ +++ IP+G +G P + + P PLV+ Sbjct: 231 SLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 290 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + +G S A S + W+ RY+I+P P Sbjct: 291 SGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQIMRYVIVPNSLPE 346 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGA A G W + +E+ + G G I +++ + V++G++++ Sbjct: 347 IFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTDIVIMGIILIGVI 400 Query: 566 VLALNRFL 573 ++ + Sbjct: 401 GFGIDMLM 408 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 19/172 (11%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++ GK+I +F + +W M + + + Sbjct: 265 PIVEFMRPVPPLALIPLVIIWAGIGESGKII--------LLFLAALWIMAIAARSGVSGV 316 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ Y+ VP S+P + ++M W VVA+E++ Sbjct: 317 KISKVHAAYSLGASKWQIMRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAAEQ---- 372 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL---FRPMIVWSNK 269 G G I A K Q+ ++ ++ ++GVI F D L+ R ++ W K Sbjct: 373 --GAGMMIMTASKFQNTDIVIMGII-LIGVIGFGIDMLMRWAERILVPWKGK 421 >gi|282854622|ref|ZP_06263957.1| ABC transporter, permease protein [Propionibacterium acnes J139] gi|282582204|gb|EFB87586.1| ABC transporter, permease protein [Propionibacterium acnes J139] gi|314923882|gb|EFS87713.1| ABC transporter, permease protein [Propionibacterium acnes HL001PA1] gi|314966061|gb|EFT10160.1| ABC transporter, permease protein [Propionibacterium acnes HL082PA2] gi|315090758|gb|EFT62734.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA4] gi|315095007|gb|EFT66983.1| ABC transporter, permease protein [Propionibacterium acnes HL060PA1] gi|315104232|gb|EFT76208.1| ABC transporter, permease protein [Propionibacterium acnes HL050PA2] gi|327328060|gb|EGE69829.1| glycine betaine/L-proline ABC transporter, permease protein [Propionibacterium acnes HL103PA1] Length = 288 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113 V S+ Q+ T++ L+ +V++++ + A AAKS+R ++ PILD MQ++P L Sbjct: 84 VRSMDQW--NNTMQTLALVVVAVILALILAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L +V F G+V GA IFA+ + F+ + + + E +F Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPP----GVRFTEL-GIRGVDTETVEAGAAFG 193 Query: 174 LSGWQKFWYLGVPFSMP 190 S W + +P +MP Sbjct: 194 ASPRHILWRIQMPLAMP 210 >gi|159044213|ref|YP_001533007.1| putative ABC transporter permease [Dinoroseobacter shibae DFL 12] gi|157911973|gb|ABV93406.1| putative ABC transporter permease protein [Dinoroseobacter shibae DFL 12] Length = 360 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL VS+ +++ + K L +P ++P + + +S+ GW Sbjct: 238 LWPTLINTALGVSSIDKDLVNVSKVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMV 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ D LA I+ A+LT+ + FL D+L+F Sbjct: 298 LIAAEMLAQN------PGLGKFVWDEFQNGSSDSLARIMVAVLTIGIIGFLLDRLMF 348 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 39/189 (20%), Positives = 77/189 (40%), Gaps = 16/189 (8%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY-YHLNPNLWLS 453 ++A+++ +P+GI G ++ + P Q+ + P+V VS Y N L+ Sbjct: 165 LVATVVAVPLGISAGLSVTANAALNPIIQIFKPVSPLAWLPIVTMVVSAVYTTNDGLFEK 224 Query: 454 LLMIFG------TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 ++ + W L N G S+ D V+ + + ++LP P Sbjct: 225 SFLVSAITVTLCSLWPTLINTALGVSSIDKDLVNVSKVLKMNTYTKITKLVLPSALPLIF 284 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCC 564 TG + G W I +E+ + + GLG ++ + + G S +++ VL + Sbjct: 285 TGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARIMVAVLTIGI 338 Query: 565 FVLALNRFL 573 L+R + Sbjct: 339 IGFLLDRLM 347 >gi|148545502|ref|YP_001265604.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|148509560|gb|ABQ76420.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] Length = 279 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 87 SLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGE 146 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ + L L IF I G A S + + R++ILP P Sbjct: 147 LS-KVLLIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGASKAQLIRHVILPSALPD 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALI 256 Query: 566 VLALNRFL 573 AL L Sbjct: 257 AFALEMSL 264 >gi|297171487|gb|ADI22487.1| ABC-type proline/glycine betaine transport system, permease component [uncultured gamma proteobacterium HF0500_07A21] Length = 709 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 12/125 (9%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 LAA +R + +L P+LD MQ++P+ +L V + L+ G I A +A + V Sbjct: 540 LAAYNRTVDALLKPVLDTMQTMPVFVYL----VPVIMLFGGGQIPAVIATVIYALPPLVR 595 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 T + + +P ++ EVS SF S Q + +P ++P + M+ ++ G + Sbjct: 596 CTTLGIRE----LPEEINEVSSSFGASTTQTLIKIKIPMAIPAI----MVGINQGIMMAL 647 Query: 209 ASEMI 213 A E+I Sbjct: 648 AMEVI 652 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 45/217 (20%), Positives = 99/217 (45%), Gaps = 30/217 (13%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T M ++ IS++ ++ +A++S R ++ PILD MQ++P +L F Sbjct: 137 AMETLSLMCISIAISVMIGVLFGIVASQSDRFETIIKPILDTMQTLPAFIYLIPAFYLFG 196 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 PG ++ + A+ + ++ N+ + +P ++E + SF + Q + Sbjct: 197 LGAPGALLATVIYALPPVV--RLTNL------GIRQVPAGIDEAATSFGATKIQSLVKVK 248 Query: 185 VPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 +P +MP G+ +MM+++ +VV T I PG+G + ++ ++ Sbjct: 249 IPMAMPAIKLGINQTVMMALA-----------LVVLATFIAAPGLGDIVFRGMQRLNVGK 297 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 L + ++ + + D++ + ++ERT+G Sbjct: 298 ALEGGVAIVLMAIVLDRVTY-------AMGQVERTSG 327 >gi|168179101|ref|ZP_02613765.1| ABC transporter, permease protein [Clostridium botulinum NCTC 2916] gi|187776832|ref|ZP_02993305.1| hypothetical protein CLOSPO_00370 [Clostridium sporogenes ATCC 15579] gi|226950677|ref|YP_002805768.1| ABC transporter permease [Clostridium botulinum A2 str. Kyoto] gi|182670213|gb|EDT82189.1| ABC transporter, permease protein [Clostridium botulinum NCTC 2916] gi|187775491|gb|EDU39293.1| hypothetical protein CLOSPO_00370 [Clostridium sporogenes ATCC 15579] gi|226842851|gb|ACO85517.1| ABC transporter, permease protein [Clostridium botulinum A2 str. Kyoto] Length = 213 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 4/134 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT+ RV+ + A II +P+G+++G ++ I F + P + PL + Sbjct: 80 ITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIG 139 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P ++L + F + ++ N IAG D+ A S W + IILP P Sbjct: 140 D-GPTIFL---ITFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIP 195 Query: 505 YYVTGAITACGGAW 518 +TGA A G W Sbjct: 196 DILTGARIAISGGW 209 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +D ++ +PI+ ++ T+V+F IG + IF I S ++ + + + NI + Sbjct: 117 IDSIRQVPIMAWVPLTIVWFG-------IG-DGPTIFLITFSGIFPVILNTIAGVKNISK 168 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 D +RS W F + +P S+P ++ +++SGGW V+ Sbjct: 169 DYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAISGGWMSVI 213 >gi|251795830|ref|YP_003010561.1| phosphate ABC transporter inner membrane protein PstC [Paenibacillus sp. JDR-2] gi|247543456|gb|ACT00475.1| phosphate ABC transporter, inner membrane subunit PstC [Paenibacillus sp. JDR-2] Length = 300 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 70/134 (52%), Gaps = 6/134 (4%) Query: 93 SRRLGMVLV-PILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQV 147 S +LG + P+++++ IP + GF+ +V+ F NL+PG+ +G AI F + Sbjct: 110 SPKLGRTFMQPVIELLAGIPSVVYGFVGLSVIVPLFRNLFPGQGVGIAAGAIVLAFM-IL 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 +T +L ++P L+E S + + WQ + + +P ++P + +++ ++ + Sbjct: 169 PTITTIATDALASLPAGLKEGSYALGATRWQTIYRIVLPTTLPAQMTGIVLGIARAFGEA 228 Query: 208 VASEMIVVGDTVIP 221 +A +M++ IP Sbjct: 229 LAVQMVIGNAPHIP 242 >gi|221215496|ref|ZP_03588460.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD1] gi|221164680|gb|EED97162.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD1] Length = 291 Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 14/179 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ A++ + +G+ IG + + P ++L PA + PL + Sbjct: 96 SVTRVLAGFAAAAVTGVGLGLAIGRYRALEDALLPPLEVLRPIPAVAWIPLAI------L 149 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P+ LS++ I G + IL N + GA A A S G+ + +ILPG Sbjct: 150 MFPSSELSMMFITFVGALFPILLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAA 209 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P TG G AW + +E+ + + G+G + S ++P++V+G+ ++ Sbjct: 210 PAIFTGLSIGMGTAWFCLVTAEMIAGQY------GIGYFTWASYTLQNYPDIVVGMALI 262 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 32/171 (18%), Positives = 71/171 (41%), Gaps = 8/171 (4%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P D+ + L LP + + R+L+ + + + R L L+P Sbjct: 72 APADVGPALWALLHSPKLPMHLFASVTRVLAGFAAAAVTGVGLGLAIGRYRALEDALLPP 131 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L++++ IP + ++ ++ F + +EL+ +F F ++ + + + Sbjct: 132 LEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPILLNTVHGAEAVDP 183 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 L +RS G+ + + +P + P + + + M WF +V +EMI Sbjct: 184 RLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAEMIA 234 >gi|163760699|ref|ZP_02167779.1| putative permease protein [Hoeflea phototrophica DFL-43] gi|162282021|gb|EDQ32312.1| putative permease protein [Hoeflea phototrophica DFL-43] Length = 281 Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 25/172 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 ++S R+ + PILDIMQ++P +L ++ F GKV G I+AI ++ N Sbjct: 112 SRSNRVQSIFNPILDIMQTMPSFVYLIPVIMLF---GIGKVPGLIAVIIYAIPPIIRLTN 168 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +D+ E + +F S WQ+ + +P ++P G+ +MM+++ Sbjct: 169 LGIRL------VDKDVLEAADAFGSSNWQRLKNVQMPLALPTIMAGINQTIMMALA---- 218 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 M+VV +++ + G+G + AI Q + L ++GV ++D+ Sbjct: 219 ------MVVVA-SMVGVQGLGQQVLRAINNQYFTLGVLNGLAIVGVAIIFDR 263 >gi|87121997|ref|ZP_01077882.1| glycine betaine/L-proline ABC transporter, permease protein [Marinomonas sp. MED121] gi|86162795|gb|EAQ64075.1| glycine betaine/L-proline ABC transporter, permease protein [Marinomonas sp. MED121] Length = 311 Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 24/178 (13%) Query: 66 SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TTL + L+A+ ++ L+A+S R+ ++ P+LD MQ++P +L V+ F Sbjct: 98 SMTTLSLVLTALFFCVVIGVPLGILSARSDRVERLVRPVLDAMQTLPAFVYLVPVVMLF- 156 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA+ V + Q +P D E +R+F + Q + Sbjct: 157 --GIGNVPGVLVTIIFAL-PPLVRLTNLGIRQ----VPEDKIEAARAFGCTPKQMLLKIQ 209 Query: 185 VPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P + P G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 210 LPLATPTIMAGINQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 256 >gi|271501225|ref|YP_003334250.1| nitrate ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344780|gb|ACZ77545.1| nitrate ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 309 Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 8/128 (6%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L + R + + PI+ +++ + L +L ++ F AE A+ + IF +W Sbjct: 141 LIGRFRFIAAMFNPIISLLRPVSPLAWLPIGLLLFQR--------AEPASSWTIFICSIW 192 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 M + + + IP+D V+R +LS + + +P +P ++ + +S+ W +V Sbjct: 193 PMILNTAEGVRQIPQDYLNVARVLKLSEFAIMRTILLPAVLPSVLTGVRLSIGIAWLVIV 252 Query: 209 ASEMIVVG 216 A+EM+ G Sbjct: 253 AAEMLTGG 260 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 20/210 (9%) Query: 361 WQSIGYIVNHFTYQDVLYVI--------WLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 WQ+ ++ + D YV W ++ RV + +A+++ IP G IG Sbjct: 89 WQT--WLAAQSIFADPFYVAGPNDQGIGWNVLASLKRVGIGFGLAALVGIPAGFLIGRFR 146 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 I++ P LL + P + + + P S + + W ++ N G Sbjct: 147 FIAAMFNPIISLLRPVSPLAWLP--IGLLLFQRAEPAS--SWTIFICSIWPMILNTAEGV 202 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P D+ VA ++ + R I+LP + P +TG + G AW + +E+ + G Sbjct: 203 RQIPQDYLNVARVLKLSEFAIMRTILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG-- 260 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G+G +I + P ++ +L++ Sbjct: 261 ----IGIGFWIWNEWNNLNVPNIITAILVI 286 >gi|311895396|dbj|BAJ27804.1| putative aliphatic sulfonate ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 301 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 11/189 (5%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I P+G+ + + + + P L + P+ + P + + N + +++ Sbjct: 114 LIGTPIGLVVAQLKPVRAALGPVLSGLQSLPSVAWVPAAIIWLGIT----NSAMYAVILL 169 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 G I +I+G P + + TG R R+I+LP P Y++G +W Sbjct: 170 GAVPSIANGLISGIDQVPPIYLRAGQTLGATGLRGARHILLPAALPGYLSGLKQGWAFSW 229 Query: 519 NASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 + + +E +AS + L GLG ++ E + V LG+L++ +A++ + PL Sbjct: 230 RSLMAAELIASSPDLGL---GLGRFLENQREFSNMSGVFLGILLILIVGVAIDLLFFSPL 286 Query: 578 YLYGTRCLR 586 R LR Sbjct: 287 E---RRVLR 292 >gi|323466568|gb|ADX70255.1| Glycine betaine/choline ABC transporter permease component [Lactobacillus helveticus H10] Length = 226 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 15/184 (8%) Query: 394 IIIASIIWIPVGIWIGFRPH-ISSKIQPFAQLLAAFPAN----VFFPLVVSCVSYYHLNP 448 ++IA+II P+G ++G + I++ + FAQ+L P+ + P + + V+ P Sbjct: 43 LLIAAIIAFPLG-YLGSKNKVIAAFCESFAQILRIIPSLALLFILIPFIGTGVA-----P 96 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L +++ ++ N + G + P D +EV S +T + I LP PY + Sbjct: 97 ALIALVVLALPP---LVVNTVLGFNEVPKDLEEVGLSLGMTNMDLLKQISLPLALPYILN 153 Query: 509 GAITACGGA-WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G A +AS+ + + + G L TGLG Y + G +L +L M F L Sbjct: 154 GIKLALVEVIASASLATYIGAGGLGQLIMTGLGLYKMQYVVIGGVSVALLSLLAMIIFDL 213 Query: 568 ALNR 571 + + Sbjct: 214 IIGK 217 >gi|295397940|ref|ZP_06807997.1| glycine betaine/proline ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] gi|294973825|gb|EFG49595.1| glycine betaine/proline ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] Length = 285 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 33/215 (15%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 T +L + VIS++ +AKS+ + +L PILD MQ++P +L V +F + Sbjct: 99 NTVTLVLVSSVISIIIGVPLGIWSAKSKTVHNILKPILDFMQTMPAFVYLIPAVAFFGIG 158 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG A++ V + Q I +L E + +F +G QK + + + Sbjct: 159 IVPG-----TFASVIFALPPTVRFTELGIKQ----ISTELVEAADAFGSTGKQKLFKVEL 209 Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 P + M G+ +M+++S +VV ++I PG+G + A++ + + Sbjct: 210 PLAKSTIMAGVNQTVMLALS-----------MVVTASMIGAPGLGRQVLTALQRASVGSG 258 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 + L ++ + L D+L +N+F ++ + Sbjct: 259 FVSGLAIVILAILIDRL--------TNRFTADKNS 285 >gi|242240062|ref|YP_002988243.1| binding-protein-dependent transporters inner membrane component [Dickeya dadantii Ech703] gi|242132119|gb|ACS86421.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech703] Length = 282 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 22/210 (10%) Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFT--------YQDVLYVIWLGCITMFRVVVLIIIA 397 + +F + GV +G W + ++ + FT + D + +G +T+ RVV ++A Sbjct: 46 VLFFGIWGGVTLG-GWVPVTFLADPFTMLREGVLLFTDYDFTQDIG-MTVMRVVAGFLLA 103 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 ++I +P+GI +G + + +PF PA+ F PL++ + +L+I Sbjct: 104 ALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIGEMQ-----KVLVI 158 Query: 458 F-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 F G+ + I+ V D E A + + +++PG P G Sbjct: 159 FIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSSRSVVLRVLIPGSAPDIAELLRLVLGW 218 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAES 546 AW IV+E+ ++G+G I +S Sbjct: 219 AWTYVIVAELIG------ASSGIGHMIVDS 242 >gi|313199894|ref|YP_004038552.1| binding-protein-dependent transport systems inner membrane component [Methylovorus sp. MP688] gi|312439210|gb|ADQ83316.1| binding-protein-dependent transport systems inner membrane component [Methylovorus sp. MP688] Length = 264 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L+ + I F V A SR + + P+ I++ +P++G + ++ N Sbjct: 73 RALTGLAIGGSFGLVLGVSMASSRFIDTSVGPLYHILRQVPLMGLVPVFSLWLGN----- 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + A +F + S + + + Y+SL + EV +LS Q+F ++ +P ++P Sbjct: 128 ---GDTAKLFIVCLSAFFPLVLATYESLRQVDGKFLEVGNVLKLSRAQQFRHILLPAALP 184 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + + +++ W + SE++ Sbjct: 185 NIFTGVSFALAMAWLSTIGSEIL 207 >gi|302522994|ref|ZP_07275336.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78] gi|302431889|gb|EFL03705.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78] Length = 247 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 16/191 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ ++ ++ +PVG +G+ P + + ++P+ Q A P PL + + Sbjct: 56 SLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGE 115 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 P +++ L F L V+A G +A + A + +++P Sbjct: 116 -TPKVFVIFLASF------LATVVAALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPAS 168 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P+ + GA G +W + +E+ + GLG + + P + +G+L + Sbjct: 169 TPFLLVGARIGLGSSWATLVAAELIA------ADKGLGYEMTHAQTYYDLPTIFVGLLTI 222 Query: 563 CCFVLALNRFL 573 L ++R L Sbjct: 223 GVVGLVMDRLL 233 >gi|282900728|ref|ZP_06308670.1| Binding-protein-dependent transport systems inner membrane component [Cylindrospermopsis raciborskii CS-505] gi|281194528|gb|EFA69483.1| Binding-protein-dependent transport systems inner membrane component [Cylindrospermopsis raciborskii CS-505] Length = 263 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 20/182 (10%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++A++I IP+G+ +G P + + ++P + PA F P++ + Y+ Sbjct: 73 SLLRVLGGFLLAAVISIPLGVLMGSFPVVRALLEPAISIFRYMPAPAFIPML---ILYFG 129 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE-VASSFHITGWRWWRYIILPGIFP 504 L + LL+ GT + FN + A +E + +S+ + G I+L I P Sbjct: 130 LGETPKI-LLIFIGT---VFFNTLMIMDAVKFVSRELIETSYTLGGQN--HQILLQVILP 183 Query: 505 YYVTGAITAC----GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 + V I AC +WN IV+E+ + T G+G I+ + E+ G++ Sbjct: 184 FIVPNIIDACRVNMAASWNLVIVAELVA------ATEGIGRRISVAQRFLKTDEIFAGLI 237 Query: 561 IM 562 ++ Sbjct: 238 VI 239 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 17/205 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + LR+L +++ + + L + +L P + I + +P F+ ++YF Sbjct: 73 SLLRVLGGFLLAAVISIPLGVLMGSFPVVRALLEPAISIFRYMPAPAFIPMLILYFGL-- 130 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E I IF V+ T + ++ + R+L E S + Q + +PF Sbjct: 131 ------GETPKILLIFIGTVFFNTLMIMDAVKFVSRELIETSYTLGGQNHQILLQVILPF 184 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLAILYA 244 +P ++ ++M+ W V+ +E++ + GIG I++A +K ++ A L Sbjct: 185 IVPNIIDACRVNMAASWNLVIVAELVAATE------GIGRRISVAQRFLKTDEIFAGLIV 238 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK 269 + + VI + +L R + W++ Sbjct: 239 IGLIGVVIDILLVMLHRMVCKWAHN 263 >gi|253576983|ref|ZP_04854306.1| glycine betaine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251843593|gb|EES71618.1| glycine betaine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 281 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 86/169 (50%), Gaps = 25/169 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 ++++ +IS+LF +A S+ + V+ P+LD MQ++P +L V +F + + PG Sbjct: 97 VITSGLISILFGIPIGIWSAYSKMVHRVISPLLDFMQTMPAFVYLLPAVTFFSLGVVPGV 156 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + + IFAI +T Y + + +L E + +F + WQK + + +P +MP Sbjct: 157 IA----SVIFAI--PPTIRLT---YLGIKQVNGELTEAANAFGSTVWQKLFKVELPLAMP 207 Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 G+ +M+S+S M+V+ ++I GIG+ + A+ + Sbjct: 208 TLMAGVNQTIMLSLS----------MVVIA-SMIGAQGIGATVYRAVTQ 245 >gi|326329657|ref|ZP_08195979.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Nocardioidaceae bacterium Broad-1] gi|325952653|gb|EGD44671.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Nocardioidaceae bacterium Broad-1] Length = 293 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 18/170 (10%) Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 I +QP+ + A P +P++V L + LL + + ++ N + G Sbjct: 132 IRQALQPYLNVFYAIPTFALYPVLVVMFG----TGALPIILLAVAFSVVVVISNSLVGFD 187 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 P ++++ S + R +R I+LP P + G G A A + SE Sbjct: 188 TVPAIVRKLSRSLDLNPLRHFRLILLPSALPDILAGLKLGLGYAIIAVLASE------FI 241 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL--------ALNRFLWH 575 L T GLG +A++ + P++ GV+ + F L AL RF W Sbjct: 242 LATKGLGNTVADAYASFNTPDMYAGVIFIAMFALGSNMLLGAALARFDWR 291 >gi|15597523|ref|NP_251017.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107101772|ref|ZP_01365690.1| hypothetical protein PaerPA_01002817 [Pseudomonas aeruginosa PACS2] gi|218891698|ref|YP_002440565.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254235335|ref|ZP_04928658.1| hypothetical protein PACG_01236 [Pseudomonas aeruginosa C3719] gi|9948362|gb|AAG05715.1|AE004659_1 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126167266|gb|EAZ52777.1| hypothetical protein PACG_01236 [Pseudomonas aeruginosa C3719] gi|218771924|emb|CAW27703.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 254 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ F W IL N AG + +++ S T W R +ILPGI + +TG A Sbjct: 129 LLAFAALWPILLNTAAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAI 188 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 G W + E+ + GLG YI ++ ++ ++ E++ Sbjct: 189 GILWIVLVPCEMLG------VSAGLGYYILDTRDRLAYSELM 224 >gi|255656336|ref|ZP_05401745.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63] gi|296450220|ref|ZP_06891981.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Clostridium difficile NAP08] gi|296260983|gb|EFH07817.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Clostridium difficile NAP08] Length = 209 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L + +LLF + S+ VL P++D ++ +PI+ ++ T+V+F Sbjct: 77 TLQRVLKGFIYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFG--- 133 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG + IF I S V+ + + Q + I +D +RS S F + +P Sbjct: 134 ----IG-DGPTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIIPA 188 Query: 188 SMPGLVWNMMMSMSGGWFFVV 208 S+P ++ +++S GW V+ Sbjct: 189 SLPDILTGSRIAISTGWMSVI 209 >gi|152981719|ref|YP_001355226.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] gi|151281796|gb|ABR90206.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] Length = 255 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 13/189 (6%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 + LF + AA R ++ ++ I++ IP L ++ F + +F + G Sbjct: 76 LGTLFGIAFGLAAATIRPFELLQAYLIRILRPIPPLAWVVFAIAWFKVSHAG-------- 127 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF-RLSGWQKFWYLGVPFSMPGLVWNM 196 A F I W ++ ++ NI E++RSF + S W++ + +P PG + + Sbjct: 128 AAFVISIGVFWINYYATASAVRNIDPRFYELARSFGQGSYWRRAVSITLPAIAPGTLAGI 187 Query: 197 MMSMSGGWFFVVASEMIVV---GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + W ++A+E++ V G + G+G+Y A+ I ++++YA+ ++ V+ Sbjct: 188 RTGIGQAWMTLIAAELLGVPGMGQEMNAAAGVGAYEAVVIYMLA-ISLVYAISDLIYVLI 246 Query: 254 LYDQLLFRP 262 L +RP Sbjct: 247 EKRVLSWRP 255 >gi|126668758|ref|ZP_01739707.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Marinobacter sp. ELB17] gi|126626795|gb|EAZ97443.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Marinobacter sp. ELB17] Length = 254 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 31/172 (18%) Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 +++ IP L ++ F +++F + P AA F I W F+ Y ++ +I Sbjct: 103 LLRPIPPLAWIPFAIIWF-GINPS-------AAAFIISIGVFWINYFASYSAVHSIDPSF 154 Query: 166 EEVSRSFRLSGWQKFW----YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +EV+++F G ++F + +P + PG++ + + GW VVA+E+ + Sbjct: 155 DEVAQAF---GQRRFLSRLTKVNLPAAAPGILGGLRAGLGQGWMTVVAAELFGI------ 205 Query: 222 LPGIGSYIALAIKEQDLLA---ILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 PGIG + ++ LLA ++ MLT+ G+ L+D L+ R ++ W Sbjct: 206 -PGIGQRM---MEASSLLATDIVVVYMLTIAGLYALFDFLFMLIQRRLLRWQ 253 >gi|294085008|ref|YP_003551768.1| putative taurine uptake ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664583|gb|ADE39684.1| probable taurine uptake ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 642 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 24/183 (13%) Query: 372 TYQDVLYVI-----WLGCITM---------FRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 Y+D L + +LG I M FRV+V + + ++ +P+GI++G S Sbjct: 423 NYKDKLLAVAQGDVYLGSIPMLDGHIWDSLFRVIVALTLGILLGVPLGIYMGVSRFFKSF 482 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 P +L P + PL+++ + ++L ++ F ++ + GAS Sbjct: 483 FDPLIELYRPVPPLAWAPLILTIFGIQD-DGKIFLLFMVAFA---IMVISARTGASGTQL 538 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + S T + R++ILP P +TG A G W + +E+ + TT Sbjct: 539 SKIRASHSLGATNQQIMRHVILPNAMPEILTGIRIAVGVCWGTLVAAEMLA------GTT 592 Query: 538 GLG 540 GLG Sbjct: 593 GLG 595 >gi|302387734|ref|YP_003823556.1| binding-protein-dependent transport systems inner membrane component [Clostridium saccharolyticum WM1] gi|302198362|gb|ADL05933.1| binding-protein-dependent transport systems inner membrane component [Clostridium saccharolyticum WM1] Length = 260 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%) Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P ++P L+ + P F L + V +L+ ++++ L++F I N +AG Sbjct: 86 PLFKDFLEPLMSLIKSVPVASFVILALIWVGSGNLS--VFIAFLVVFPI---IYINTMAG 140 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 ++ E+A +FH+ G + YI P + PY ++G A G W + + +EV Sbjct: 141 FTSTDPKLLEMARTFHMQGGKKLFYIYRPALMPYLISGCRVALGMGWKSGVAAEV 195 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 59/121 (48%), Gaps = 9/121 (7%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P++ +++S+P+ F+ +++ +G+ ++F F + + Sbjct: 92 LEPLMSLIKSVPVASFVILALIW---------VGSGNLSVFIAFLVVFPIIYINTMAGFT 142 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 + L E++R+F + G +K +Y+ P MP L+ +++ GW VA+E+I V + Sbjct: 143 STDPKLLEMARTFHMQGGKKLFYIYRPALMPYLISGCRVALGMGWKSGVAAEVIGVPNHS 202 Query: 220 I 220 I Sbjct: 203 I 203 >gi|253997820|ref|YP_003049883.1| binding-protein-dependent transport systems inner membrane component [Methylovorus sp. SIP3-4] gi|253984499|gb|ACT49356.1| binding-protein-dependent transport systems inner membrane component [Methylovorus sp. SIP3-4] Length = 264 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L+ + I F V A SR + + P+ I++ +P++G + ++ N Sbjct: 73 RALTGLAIGGSFGLVLGVSMASSRFIDTSVGPLYHILRQVPLMGLVPVFSLWLGN----- 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + A +F + S + + + Y+SL + EV +LS Q+F ++ +P ++P Sbjct: 128 ---GDTAKLFIVCLSAFFPLVLATYESLRQVDGKFLEVGNVLKLSRAQQFRHILLPAALP 184 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + + +++ W + SE++ Sbjct: 185 NIFTGVSFALAMAWLSTIGSEIL 207 >gi|83950025|ref|ZP_00958758.1| taurine ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83837924|gb|EAP77220.1| taurine ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 424 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV +I +++ IP+G +G P + + P PLV+ Sbjct: 233 SLFRVVVGFLIGALVGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIGE 292 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + +G S A S + W+ RY+I+P P Sbjct: 293 AGK----IILLFLAALWIMAIAARSGVSGVAISKVHAAYSLGASKWQIMRYVIIPNSLPE 348 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 349 IFTGARVAMGVCWGTVVAAELVA 371 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 8/114 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F GK+I +F + +W M + + + Sbjct: 267 PIVEFMRPVPPLALIPLVIIWFGIGEAGKII--------LLFLAALWIMAIAARSGVSGV 318 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + S S WQ Y+ +P S+P + ++M W VVA+E++ Sbjct: 319 AISKVHAAYSLGASKWQIMRYVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAA 372 >gi|319947269|ref|ZP_08021502.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus australis ATCC 700641] gi|319746511|gb|EFV98771.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus australis ATCC 700641] Length = 303 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + +LP + +LSA+V + + S + +L P ++++ IP Sbjct: 69 PSGKEFGALPMILGSFIVTLLSALVATPFAIGAAVFMTEVSPKGARLLQPAIELLVGIPS 128 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ VV + +++ G G L+ +F +F + +TF SL +PR E Sbjct: 129 VVYGFIGLQVVVPFVRSIFGGTGFGI-LSGVFVLFVMILPTVTFMTTDSLRAVPRHYREA 187 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W++ + + G+ ++ M+ + +A +M+V V+P Sbjct: 188 SMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVVP 240 >gi|254486656|ref|ZP_05099861.1| choline ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214043525|gb|EEB84163.1| choline ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 277 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + +LSA V+ + AA RL + P+LD+MQ++P +L +V+ Sbjct: 91 EETTESLTLVLSACVVCMGVGVPIGIAAAHRPRLYRYMAPVLDLMQTLPTFVYLIPAIVF 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + I +Q+ + + P+ L E +++F Q W Sbjct: 151 FGIGMVPGLIATVIFVLPAPIRLTQL---------GIASTPKSLLEAAQAFGAKPSQTLW 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 202 KIELPYALPQIMAGLNQTIMLSLS 225 >gi|83950286|ref|ZP_00959019.1| glycine betaine/proline ABC transporter, permease protein, putative [Roseovarius nubinhibens ISM] gi|83838185|gb|EAP77481.1| glycine betaine/proline ABC transporter, permease protein, putative [Roseovarius nubinhibens ISM] Length = 513 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 28/196 (14%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q A T +++A +I ++F +KSRR ++ PILD+MQ+IP +L + + Sbjct: 325 QTAMDTMSLVVAASIICVVFGLPLGIWVSKSRRGKAIITPILDVMQTIPSFVYLLPAIAF 384 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F GK G IFA+ M + +P + +E + +F + Q Sbjct: 385 F---SIGKPPGILATVIFAMPP-----MVRLTALGILQVPENTKEAALAFGANPRQLLTK 436 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD- 237 + +P +MP G+ +MMS+S VV + +I G G+G + A++ + Sbjct: 437 VELPLAMPSIMTGINQVVMMSLS----MVVVAALIGAG-------GMGYIVTEALENTET 485 Query: 238 ----LLAILYAMLTML 249 L I A+L M+ Sbjct: 486 GRGVLAGIGIALLAMM 501 >gi|300172857|ref|YP_003772022.1| OpuABC protein [Leuconostoc gasicomitatum LMG 18811] gi|299887235|emb|CBL91203.1| OpuABC [Leuconostoc gasicomitatum LMG 18811] Length = 568 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A VISL+ + AKS + ++ PILD MQ++P +L V +F + + PG Sbjct: 102 ASVISLVIGIPLGIITAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 +FA + M + +P L E + SF + WQK L +P + + Sbjct: 158 -----VFASIIFALPPMVRMTDLGIRQVPVALVEAADSFGSTTWQKLIKLELPNARNTIL 212 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G +M+++S +VV ++I PG+G + A++ D+ Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQRADV 250 >gi|320120628|gb|EFE28017.2| ABC transporter permease [Filifactor alocis ATCC 35896] Length = 257 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 5/109 (4%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P + A P F L + +S +L+ +++S LM+ I NV++G P Sbjct: 91 LEPIITTVQATPVVSFIILCLIWLSSKNLS--IFISFLMVIPI---IYRNVLSGIDNIPK 145 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E+A+ F + R R I + +FPY+ + +C AW + I +EV Sbjct: 146 GLLEMATVFRVDKKRLVRIIYVSEVFPYFRSACNISCALAWKSGIAAEV 194 >gi|170692256|ref|ZP_02883419.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gi|170142686|gb|EDT10851.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 288 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 34/191 (17%) Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQW 462 F+P I + Q++ PA PLV+ LW + L+ G + Sbjct: 116 FKP-IEIALDSTVQMIRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFF 163 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I N G + ++ E+A S+ + G +R++ILPG P + G A G W I Sbjct: 164 PIYVNTFHGIRSVDSNLIEMARSYGVKGVALYRHVILPGALPSILVGVRFAFGLMWVTLI 223 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FL 573 V+E S +G+G + E VV+G+L+ VLA L R Sbjct: 224 VAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKIADVLAKSLERVSLR 277 Query: 574 WHPLYLYGTRC 584 WHP Y G + Sbjct: 278 WHPAYQRGGKA 288 >gi|240169163|ref|ZP_04747822.1| binding-protein dependent transport system inner membrane protein [Mycobacterium kansasii ATCC 12478] Length = 274 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R+ + I S + I G IG P + ++P A L PA + P++V Sbjct: 80 VSVRRIAIGFAIGSTVGILAGAVIGTSPLAAKILEPTALTLIPVPAVAWIPVLVIVFGIG 139 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ L+ G+ ++ AG + D EVA + + W R ++LP P Sbjct: 140 ELSK----VTLVAIGSATTLILATAAGIRSASQDLVEVAQLYEKSRWTVLRTVLLPSAAP 195 Query: 505 YYVTGAITACGGAWNASIVSEV 526 V A A +W + +EV Sbjct: 196 SIVASARVAMALSWTLLVAAEV 217 >gi|328542595|ref|YP_004302704.1| ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326412341|gb|ADZ69404.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1] Length = 294 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QVWN 149 A+S RL ++ P+LD+MQ++P+ +L V+ F GKV G I+AI ++ N Sbjct: 125 ARSDRLQALVNPVLDLMQTMPVFVYLIPVVMIF---GLGKVPGVIAVVIYAIPPMIRLTN 181 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + + D+ E + +F S WQK + +P ++P + M+G ++ Sbjct: 182 LGIRL------VSPDVLEAADAFGSSSWQKLRNVQLPLALPTI-------MAGINQCIMM 228 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQ 236 S +VV ++I + G+G + AI Q Sbjct: 229 SLAMVVVASMIGVRGLGQPVLQAINNQ 255 >gi|13378312|gb|AAK18747.1| ProW-like protein [Enterobacter amnigenus] Length = 295 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+ V+ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 110 ARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 164 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 165 TI---LGINQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 217 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 218 VVIASMIAVG-------GLGQMVLRGIGRLDM 242 >gi|41406244|ref|NP_959080.1| hypothetical protein MAP0146 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394592|gb|AAS02463.1| hypothetical protein MAP_0146 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 233 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 11/126 (8%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L+A +RRL L P + +++P L ++ +++F K++ + A F ++T+ Sbjct: 68 LSATARRL---LAPTVAAFRTVPSLAWVPLLLLWFGIDETPKILMVAIGAFFPVYTTTA- 123 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +L +I L EV R++ G + +P + P LV + + ++ W FVV Sbjct: 124 -------SALSHIDAHLVEVGRAYGRHGVSLLTAVLLPAAAPELVNGLRLGLANAWLFVV 176 Query: 209 ASEMIV 214 A+E+I Sbjct: 177 AAELIA 182 >gi|300789773|ref|YP_003770064.1| glycine/betaine ABC transporter permease [Amycolatopsis mediterranei U32] gi|299799287|gb|ADJ49662.1| permease component of ABC-type proline/glycine betaine transport system [Amycolatopsis mediterranei U32] Length = 227 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 8/116 (6%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 ++VI+L+ + R G+ LV + ++++P LG +TF + F +IG Sbjct: 35 SLVIALVIAVPLGLFVGHTGRGGVALVSAGNAIRALPTLGLVTFLFLLFTESVTSTIIGL 94 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + A+ I Y L + + + ++GWQ+ W + VP S+P Sbjct: 95 VVLAVPPILAGT--------YAGLQATDHGVVDAAEGVGMTGWQRLWQVEVPISLP 142 >gi|297617500|ref|YP_003702659.1| binding-protein-dependent transporters inner membrane component [Syntrophothermus lipocalidus DSM 12680] gi|297145337|gb|ADI02094.1| binding-protein-dependent transport systems inner membrane component [Syntrophothermus lipocalidus DSM 12680] Length = 264 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L+ +++ + + A SR+ P +D ++ +P+ + ++YF Sbjct: 74 RVLAGFLVAAVLAIPLGIVMATSRKAEAFFEPFIDFVRYLPVTALIPLMILYFG------ 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG + + IF + + + ++ +P++L + + G + + +P S+P Sbjct: 128 -IG-DFEKVAVIFVGTFFQLVLMVQDTVSTVPKELLHAAYTLGTKGRAVYTKVLLPASLP 185 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 G++ N+ + M W ++V +E++ Sbjct: 186 GIMDNLRICMGWAWTYLVVAELV 208 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 35/178 (19%), Positives = 78/178 (43%), Gaps = 10/178 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++++RV+ ++A+++ IP+GI + + +PF + P PL+ + Y+ Sbjct: 70 VSLYRVLAGFLVAAVLAIPLGIVMATSRKAEAFFEPFIDFVRYLPVTALIPLM---ILYF 126 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++++ + GT + ++ V S P + A + G + ++LP P Sbjct: 127 GIGDFEKVAVIFV-GTFFQLVLMVQDTVSTVPKELLHAAYTLGTKGRAVYTKVLLPASLP 185 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + G AW +V+E+ + +GLG I S + +G+L++ Sbjct: 186 GIMDNLRICMGWAWTYLVVAELVA------ANSGLGFMILRSQRFLQTDRIFVGLLVI 237 >gi|83649325|ref|YP_437760.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83637368|gb|ABC33335.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Hahella chejuensis KCTC 2396] Length = 338 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 20/200 (10%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V V +A +I +PVG+ G + + + P Q+ + PLV VS + Sbjct: 131 SLYTVFVGFSLAVLIAVPVGVVCGLSKTMYAAVNPLIQIFKPVSPLAWLPLVTMVVSAVY 190 Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ + W L N + G S D V+ ++ R ++ Sbjct: 191 VTDDPLFEKSFVNSAITVTLCCMWPTLVNTVVGVSGLDKDLNNVSLVLRLSWTTKVRKVV 250 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + G W I +E+ + + GLG ++ + + GS LG Sbjct: 251 LPFAVPMIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNS--LG 302 Query: 559 VLIMCCFVL-----ALNRFL 573 +++ F + AL+R + Sbjct: 303 RIMVAVFTIGFIGFALDRVM 322 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 6/72 (8%) Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + + +DL VS RLS K + +PF++P + M +S+ GW ++A+EM+ Sbjct: 224 VSGLDKDLNNVSLVLRLSWTTKVRKVVLPFAVPMIFTGMRLSLGVGWMVLIAAEMLAQN- 282 Query: 218 TVIPLPGIGSYI 229 PG+G ++ Sbjct: 283 -----PGLGKFV 289 >gi|89893966|ref|YP_517453.1| hypothetical protein DSY1220 [Desulfitobacterium hafniense Y51] gi|219668341|ref|YP_002458776.1| binding-protein-dependent transporters inner membrane component [Desulfitobacterium hafniense DCB-2] gi|89333414|dbj|BAE83009.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538601|gb|ACL20340.1| binding-protein-dependent transport systems inner membrane component [Desulfitobacterium hafniense DCB-2] Length = 279 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L A+ VL PILD MQ++P +L +++F L + AIF + ++ Sbjct: 111 LGARHNGFHRVLSPILDFMQTMPSFVYLIPALMFF-----------SLGTVSAIFATVIF 159 Query: 149 NMTFSMYQSLCNI---PRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 M + + I P DL EV +F + Q W + +P ++P G+ MM+S+S Sbjct: 160 AMPPVIRLTALGIRQVPADLVEVGEAFGSNSRQMLWKIQLPLALPTIMAGINQTMMLSLS 219 Query: 202 GGWFFVVASEMI 213 VV S MI Sbjct: 220 ----MVVISAMI 227 >gi|259907586|ref|YP_002647942.1| glycine betaine transporter membrane protein [Erwinia pyrifoliae Ep1/96] gi|224963208|emb|CAX54692.1| Glycine betaine/L-proline transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283477428|emb|CAY73344.1| Glycine betaine/L-proline ABC transport system,inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 387 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 204 ARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 259 TI---LGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 311 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336 >gi|124485881|ref|YP_001030497.1| hypothetical protein Mlab_1061 [Methanocorpusculum labreanum Z] gi|124363422|gb|ABN07230.1| binding-protein-dependent transport systems inner membrane component [Methanocorpusculum labreanum Z] Length = 280 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 15/191 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T + +L A VI+L + AA+S L L PILD MQ++P +L V++F Sbjct: 94 TVVLVLIATVIALALSIPIGIGAARSDTLNAALRPILDFMQTMPSFVYLIPAVIFF---G 150 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G IFA + T + Q +P +L EV+ +F + QK + + +P Sbjct: 151 LGSVPGIIATVIFA-MPPALRLTTLGIRQ----VPVELIEVADAFGATPRQKLFKVQLPV 205 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P ++ + + V + MI G G+G + + I+ D+ A L Sbjct: 206 ALPTIMAGVNQCIMLALSMTVIASMIGAG-------GLGYQVLVGIQRVDIGMGFEAGLA 258 Query: 248 MLGVIFLYDQL 258 ++ + ++D++ Sbjct: 259 IVILAIIFDRI 269 >gi|116749646|ref|YP_846333.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] gi|116698710|gb|ABK17898.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] Length = 314 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M R+ + +IA +I IP+G+ +G+ + P + L P + PL V Sbjct: 123 SMGRIYLGFMIACLIGIPLGLMMGWNRTFKNFTFPTFESLRPIPVISWIPLSVIMFPLTE 182 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L+ G + I+ N + G + D+ + A S + IILPG P Sbjct: 183 HS----IVFLVFLGAFYPIVLNTLLGVESVRADYIQGALSLGSKPRHIFFDIILPGALPS 238 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 TG G AW + +E+ + G+ GLG ES ++P ++LG+ I+ Sbjct: 239 IFTGMTVGMGLAWVMVVAAEMVAGGY------GLGYMTWESYILIAYPRIILGMFII 289 >gi|318081537|ref|ZP_07988853.1| binding-protein-dependent transporter inner membrane component [Streptomyces sp. SA3_actF] Length = 270 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 16/191 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ ++ ++ +PVG +G+ P + + ++P+ Q A P PL + + Sbjct: 79 SLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGE 138 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 P +++ L F L V+A G +A + A + +++P Sbjct: 139 -TPKVFVIFLASF------LATVVAALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPAS 191 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P+ + GA G +W + +E+ + GLG + + P + +G+L + Sbjct: 192 TPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIFVGLLTI 245 Query: 563 CCFVLALNRFL 573 L ++R L Sbjct: 246 GVVGLVMDRLL 256 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 14/163 (8%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P + +++P L + +V IG E +F IF + + Q + Sbjct: 110 LLEPYVQFFRAVPPLAIIPLAIVLLG-------IG-ETPKVFVIFLASFLATVVAALQGV 161 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 R L + +R F + +P S P L+ + + W +VA+E+I Sbjct: 162 TATDRTLIDAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAELIAADK- 220 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G + A DL I +LT+ V + D+LL R Sbjct: 221 -----GLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLR 258 >gi|310764905|gb|ADP09855.1| glycine betaine transporter membrane protein [Erwinia sp. Ejp617] Length = 387 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 204 ARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 259 TI---LGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 311 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336 >gi|219855452|ref|YP_002472574.1| hypothetical protein CKR_2109 [Clostridium kluyveri NBRC 12016] gi|219569176|dbj|BAH07160.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 260 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ I+++ II I G+ G + ++P + A P V ++++ V + Sbjct: 77 SVIRVIIGILLSVIIGIVFGLTAGLNKFVEELLEPVVITVKATP--VISIIIIALVWFNS 134 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N ++ ++L+ F + NV+ G + ++A+ F + + I LP I Y Sbjct: 135 SNVVIFTAILICFPIVYT---NVLQGIKSIDKSLIQMANVFKVKRKYVLKDIYLPSIKNY 191 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 V+G + G W S+ SEV S I + GL A++T Sbjct: 192 IVSGILMCMGIGWKVSVASEVLS---IPRYSIGLNLLSAKTT 230 >gi|256847670|ref|ZP_05553115.1| ABC transporter permease component [Lactobacillus coleohominis 101-4-CHN] gi|256715359|gb|EEU30335.1| ABC transporter permease component [Lactobacillus coleohominis 101-4-CHN] Length = 510 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 10/129 (7%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV-VYFMNLYPGKV 131 L A++I+++ A L RR+ + + I+Q+IP L L + + + P V Sbjct: 28 LLALLIAIVIAIPLAILLKDHRRIAEACLQVAGIVQTIPSLAILGLLIPLVGIGTVPA-V 86 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 I L AI IF + Y L I +LEE + +F L+ W+K L +P +MP Sbjct: 87 IALVLYAIMPIFQN--------TYAGLTQIAPNLEEAATAFGLTKWKKLQRLELPLAMPM 138 Query: 192 LVWNMMMSM 200 ++ + +S+ Sbjct: 139 ILSGIRISL 147 >gi|157691067|ref|YP_001485529.1| glycine betaine ABC transporter membrane protein [Bacillus pumilus SAFR-032] gi|157679825|gb|ABV60969.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 281 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +L+A+VIS++ A++ + ++ PILD+MQ++P +L ++F N+ Sbjct: 92 QTLALVLTAVVISIVIGVPIGIWASQKETVRKIVTPILDLMQTMPAFVYL-LPAIFFFNI 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IF++ MT + +P DL E + +F + +Q+ + + +P Sbjct: 151 --GVVPGVVASVIFSM--PPTIRMTI---LGIKQVPSDLIEATEAFGSTTFQRLFKVQLP 203 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + ++ + S+ ++A M+V+ ++ PG+GS + A+ + Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245 >gi|149201337|ref|ZP_01878312.1| binding-protein-dependent transport systems inner membrane component [Roseovarius sp. TM1035] gi|149145670|gb|EDM33696.1| binding-protein-dependent transport systems inner membrane component [Roseovarius sp. TM1035] Length = 421 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV+V + +++ IP+G +G P + + P PLV+ Sbjct: 230 SLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + + AG S A S + W+ R++I+P P Sbjct: 290 SGK----IILLFLAALWIMTISARAGVSGVAISKVHAAYSLGASKWQLMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++ GK+I +F + +W MT S + + Sbjct: 264 PIVEFMRPVPPLALIPLVIIWAGIGESGKII--------LLFLAALWIMTISARAGVSGV 315 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + S S WQ ++ VP S+P + ++M W VVA+E++ Sbjct: 316 AISKVHAAYSLGASKWQLMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELV 367 >gi|324113735|gb|EGC07710.1| inner membrane transport system [Escherichia fergusonii B253] Length = 263 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F ++ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESARIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|264676297|ref|YP_003276203.1| taurine transporter permeaseprotein tauC [Comamonas testosteroni CNB-2] gi|262206809|gb|ACY30907.1| taurine transport system permeaseprotein tauC [Comamonas testosteroni CNB-2] Length = 285 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 10/178 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ ++A++I +P+GI +G I + +PF PA+ F PL++ V Sbjct: 93 MTVWRVMGGFVLAAVIAVPLGIAMGAYKPIEAIFEPFVSFARYLPASAFIPLLIMWVGIG 152 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 LS++ I G + + V+ D E A + T R ++LPG P Sbjct: 153 EAQK---LSIIFI-GCFFQLTLMVMMIVGNARRDLVEAAYTLGSTDSSVIRRVLLPGAAP 208 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G W +V+E+ +G+G I +S + ++ G++I+ Sbjct: 209 EIAEALRQVLGLGWTYVVVAELIG------AASGIGHMIMDSQALMATDNIIAGIVII 260 >gi|329901029|ref|ZP_08272674.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Oxalobacteraceae bacterium IMCC9480] gi|327549276|gb|EGF33852.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Oxalobacteraceae bacterium IMCC9480] Length = 273 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 19/199 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M+RVVV ++ + + +P+G+ +G + + + P Q+L P + PL S + + Sbjct: 80 SMYRVVVGFLVGAGLALPLGLSMGASKRVYAWLNPLMQVLRPIPPIAYIPL--SILWFGL 137 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 NP L+ G + +L N IAG + + A + + + ++LP PY Sbjct: 138 GNPP--AVFLIAIGAFFPVLINTIAGVRNVDSIYLRAARNLGASQSTLFLRVMLPAAVPY 195 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV------ 559 ++G G A+ IV+E+ + GLG I E+ E +++ G+ Sbjct: 196 ILSGVRIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYFWSDKIIAGMISIGML 249 Query: 560 -LIMCCFVLALNRFL--WH 575 L++ V LN L WH Sbjct: 250 GLVIDLAVTRLNNHLLRWH 268 >gi|292489182|ref|YP_003532069.1| glycine betaine/L-proline ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900299|ref|YP_003539668.1| glycine betaine/L-proline ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200147|emb|CBJ47273.1| glycine betaine/L-proline ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291554616|emb|CBA22278.1| Glycine betaine/L-proline ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312173341|emb|CBX81596.1| Glycine betaine/L-proline ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 387 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 204 ARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 259 TI---LGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 311 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336 >gi|227509013|ref|ZP_03939062.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191490|gb|EEI71557.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 237 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 8/171 (4%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 +D++ H+L Q+ + R+ A ++LF ++ SR++ + P++ ++ Sbjct: 27 IDLLQNGYKGHTLWQHLWASLQRLFIAYFAAVLFAIPLGLVSGYSRKVRAIFEPVITFLR 86 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 +P LG+ T +++ K++ L A I+ S V + + D Sbjct: 87 PLPPLGYYTIIILWMGTGNTSKIVLLFLGAFSPIYVSCV--------AGVSRVKIDYLNR 138 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +R+ + +Q F ++ +P S+P + + +MS + VA+EM+ G + Sbjct: 139 ARTLGANQFQVFSHVVLPASLPDIFVGLRNAMSVAYATSVAAEMVAAGSGI 189 >gi|254502502|ref|ZP_05114653.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222438573|gb|EEE45252.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 421 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 16/161 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F GK+I +F + +W MT + + + Sbjct: 264 PIVEFMRPVPPLALIPLVIIWFGIGESGKII--------LLFLAALWIMTIAARAGVSGV 315 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S Q W++ VP S+P + ++M W VVA+E++ Sbjct: 316 NISKVHAAYSLGASKSQILWHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAAEK---- 371 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261 G G I A K Q L I+ + ++GVI F D L+ R Sbjct: 372 --GAGKMIVAASKFQ-LTDIVIMGIILIGVIGFAIDVLMRR 409 >gi|186471608|ref|YP_001862926.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184197917|gb|ACC75880.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 294 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +++A V SL+ A+++R+ MVL +LD MQ++P +L V+ F + P Sbjct: 94 VIAATVFSLVIGVPLGIWGARNKRVEMVLRSLLDFMQTMPAFVYLIPAVILFGLGRVP-- 151 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A +A I V T + Q + +L E RSF + Q W + +P ++P Sbjct: 152 ---AVIATIVFAMPPVVRLTTLGIRQ----VREELLEAGRSFGSTDAQLLWKVQLPNALP 204 Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S VV + MI G G+G Y+ I+ D+ Sbjct: 205 SIMAGVNQTIMMALS----MVVVASMIGAG-------GLGEYVLSGIQRLDI 245 >gi|307352362|ref|YP_003893413.1| binding-protein-dependent transport systems inner membrane component [Methanoplanus petrolearius DSM 11571] gi|307155595|gb|ADN34975.1| binding-protein-dependent transport systems inner membrane component [Methanoplanus petrolearius DSM 11571] Length = 284 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 25/177 (14%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 T ++++ I+LL A+++ VL P LD MQ++P +L V++F Sbjct: 99 ETLALVITSTFIALLIAIPTGITASRNDIFDRVLRPFLDFMQTMPSFVYLIPAVIFFAL- 157 Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G V G IFA+ + ++ N+ + IP++L EV+ SF + QK + + Sbjct: 158 --GDVPGVIATVIFAMPPAIRLTNL------GIRQIPKELNEVADSFGATPNQKLIKVQL 209 Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 P +MP G+ +M+S+S V + MI G G+G + + I+ D+ Sbjct: 210 PVAMPTIMAGVNQCIMLSLS----MTVIASMIGAG-------GLGYNVLVGIQRVDI 255 >gi|239827957|ref|YP_002950581.1| binding-protein-dependent transporters inner membrane component [Geobacillus sp. WCH70] gi|239808250|gb|ACS25315.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. WCH70] Length = 281 Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust. Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 10/180 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++FR ++ + I I GI +GF I P Q+L P PL + + Sbjct: 85 VSIFRAATGFLLGAGIGILAGIAVGFSTKTEDVIDPTVQMLRTIPHLAVAPLFILWFGFG 144 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + LL+ G + + N G +VA H + W +I+P P Sbjct: 145 ETSK----ILLIAKGAFFPVYVNTFLGIRGVDAKLFDVARILHFSRWEKITLLIIPSALP 200 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 ++G + G AW +V+E+ T G+G + ++ + + V +G+++ Sbjct: 201 TILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAV 254 >gi|313682504|ref|YP_004060242.1| nitrate ABC transporter, inner membrane subunit [Sulfuricurvum kujiense DSM 16994] gi|313155364|gb|ADR34042.1| nitrate ABC transporter, inner membrane subunit [Sulfuricurvum kujiense DSM 16994] Length = 263 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 30/146 (20%), Positives = 68/146 (46%), Gaps = 8/146 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ +++L L S+ + L P + I++ + L +L + F ++ Sbjct: 74 RVFGGFALAILVGVPLGLLIGMSKNAFIALNPFIQILKPVSPLAWLPLLLFVFKDI---- 129 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L AI IF + +W + + + ++ D V++ +L+ ++K + + +P ++P Sbjct: 130 ----NLTAITTIFITSIWPIIINTALGVRSVSEDYLNVAKVLQLTPFEKVFQIILPVAVP 185 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216 + M +S+ W +VA+EM+ G Sbjct: 186 FIFTGMRLSLGIAWLVIVAAEMLTGG 211 Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 6/162 (3%) Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +D + W ++ RV +A ++ +P+G+ IG + + PF Q+L Sbjct: 55 YINNEDDKGIGWQILNSLERVFGGFALAILVGVPLGLLIGMSKNAFIALNPFIQILKPVS 114 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHI 488 + PL++ +L ++ IF T W I+ N G + D+ VA + Sbjct: 115 PLAWLPLLLFVFKDINLT-----AITTIFITSIWPIIINTALGVRSVSEDYLNVAKVLQL 169 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 T + IILP P+ TG + G AW + +E+ + G Sbjct: 170 TPFEKVFQIILPVAVPFIFTGMRLSLGIAWLVIVAAEMLTGG 211 >gi|163746782|ref|ZP_02154139.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex HEL-45] gi|161379896|gb|EDQ04308.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex HEL-45] Length = 250 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 50/261 (19%), Positives = 112/261 (42%), Gaps = 16/261 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 PF R++ A + I + + L G+ +P + + + + L Q A + Sbjct: 2 PFAGHRVWRGAVSF-ALAMAIWQLVVTLSGVPRFILPGPWLVLQALGANAALLWQNALWS 60 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 + + + ++ A L SRR +L P+L + Q++P+ ++ P Sbjct: 61 AGNLALGLGVGIILGVETAVLLTLSRRARWLLRPMLVVAQAVPVFALAPVITLWLGYGMP 120 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K++ L F I ++ ++ L +P L ++SR S W++ L +P + Sbjct: 121 SKIVTIALVTYFPIASA--------LFDRLMALPPGLSDLSRLAGASRWRETLLLRLPHA 172 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGL+ + +++ V +++G+ V G+G ++ L + A+++A L + Sbjct: 173 VPGLISGLRLAV------VYGPLAVLIGEWVGSSRGLG-HLMLMANGRGQTALMFAALVV 225 Query: 249 LGVIFLYDQLLFRPMIVWSNK 269 L + L ++ + W+ + Sbjct: 226 LAALSLVLWVVVEALARWAAR 246 >gi|319940944|ref|ZP_08015281.1| binding-protein-dependent transport system inner membrane component [Sutterella wadsworthensis 3_1_45B] gi|319805517|gb|EFW02312.1| binding-protein-dependent transport system inner membrane component [Sutterella wadsworthensis 3_1_45B] Length = 264 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 14/189 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++ V+ +I +I + VG+W+ P ++ PF + + P + P+ ++ Sbjct: 72 VTLYETVMAFVIGTIAGLAVGLWLALSPVAAAVADPFIKGFNSMPRVILAPIF---AVWF 128 Query: 445 HLNP--NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 L P + L ++F + + FNV G + A T + RY+ LP Sbjct: 129 GLGPASKIALGFTLVF---FIVFFNVYQGVREVNPNVLASAKMLGATHRQLLRYVYLPSA 185 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + + T+ G A+ A+++ E G+G I ++ V+ G+L++ Sbjct: 186 MSWVFSSLHTSVGMAFVAAVIGEYLG------SAEGVGYLILQAETTFDMNTVMAGILVL 239 Query: 563 CCFVLALNR 571 L L+R Sbjct: 240 TACALILDR 248 >gi|33593593|ref|NP_881237.1| ABC transport protein, inner membrane component [Bordetella pertussis Tohama I] gi|33572949|emb|CAE42890.1| ABC transport protein, inner membrane component [Bordetella pertussis Tohama I] gi|332382999|gb|AEE67846.1| ABC transport protein, inner membrane component [Bordetella pertussis CS] Length = 264 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 23/240 (9%) Query: 344 LDIFWFCVVCGVAI-----GIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVV 392 L IF ++CG+A+ G + SI + T ++ + ++ G I ++ R+V Sbjct: 17 LTIFIVSILCGLAVWAWTSGSLFPSILFPGPQATLREGVRMLESGSIIVDAAVSLARIVA 76 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 I S I I VG+ IG+ P + + P+ Q P + V + ++ + + Sbjct: 77 GFTIGSAIGIVVGLLIGYFPMVRTAFNPYLQFFRFVPPIAW---VSPAMIWFGVGETSKI 133 Query: 453 SLLMIFGTQWYILFNVIAG-ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 ++++GT + + + +AG A A N + A F T W+ +R++++P +TG Sbjct: 134 -FIIVYGTVFTVALSAVAGVADAHVNKIRA-AQMFGATRWQIFRHVVIPSTVSPILTGMR 191 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + G ++ I +E+ + +G+G I S + ++ +G+ ++ C +R Sbjct: 192 VSMGISFMTVIAAEMLA------AESGIGYLILNSRLWMATDKIFVGIFVLGCLGYGADR 245 >gi|39935744|ref|NP_948020.1| putative ABC transporter permease [Rhodopseudomonas palustris CGA009] gi|192291331|ref|YP_001991936.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Rhodopseudomonas palustris TIE-1] gi|39649597|emb|CAE28119.1| putative permease protein, subunit of ABC transporter [Rhodopseudomonas palustris CGA009] gi|192285080|gb|ACF01461.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 294 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 10/151 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A+++ IP+G+ IG P + + + P LL P + PL + ++ L P + L Sbjct: 111 LAALLGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPL---SMIFFGLGPKSAV-FL 166 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + IL N + G + E A +G + +R ++LP P G Sbjct: 167 VFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCSGPQLFRSVVLPAALPSIFNGLRLGAS 226 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 AW +V E+ GLGA I + Sbjct: 227 FAWILIVVGEMTGVPE------GLGAVIMDG 251 >gi|167573338|ref|ZP_02366212.1| taurine ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 285 Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 12/170 (7%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVGI I + + P + P + PL+V + +L+I+ T Sbjct: 111 IPVGILIATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDTS-----KILLIYLTM 165 Query: 462 WYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 + L AGA+ A+S T ++ R+++LP P +TG A G W+ Sbjct: 166 FAPLTIATAAGANGVSASRLRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWST 225 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ + T GLG + ++ VV G+L++ LAL Sbjct: 226 LVAAELIA------ATRGLGFMVYSASRFLVTDVVVAGILVIGAIALALE 269 >gi|163795907|ref|ZP_02189871.1| putative BC-type proline/glycine betaine transport system, permease component [alpha proteobacterium BAL199] gi|159178940|gb|EDP63476.1| putative BC-type proline/glycine betaine transport system, permease component [alpha proteobacterium BAL199] Length = 288 Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 25/202 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + T +LSA ++ +L AA +R + PILD+MQ+IP +L T++ Sbjct: 95 EATTETLALVLSATLVCVLIGVPVGIYAAHNRWFYSGIRPILDLMQTIPTFVYLIPTLML 154 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A I +++ + N+P+ L E +F + WQ Sbjct: 155 FGLGVVPGLISTVVFAVPAPIRLTEL---------GVRNVPKPLIEAGEAFGATRWQLLL 205 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S +VV ++ G+G + A+ + Sbjct: 206 KVELPHAMPTIMAGVTQCIMLSLS-----------MVVIAALVGANGLGKPVVRALNTVN 254 Query: 238 LLAILYAMLTMLGVIFLYDQLL 259 + A L ++ V L D+++ Sbjct: 255 IAQGFEAGLAIVIVAILMDRIM 276 >gi|115391880|dbj|BAF33367.1| putative transporter protein [Streptomyces sp. NL15-2K] Length = 257 Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 19/189 (10%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 IAS I VG+ I PH+ + L P+ PL V + L L LL Sbjct: 70 IASCAGIVVGVLISVVPHLREATASTIEFLRPIPSVALIPLAV-LLYGSELRSVL---LL 125 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +++ + W +L V+ G +E A S+ + W R+++ P PY +TG A Sbjct: 126 VVYASFWQVLIQVLYGVQDVDPVAEETARSYGLGTWARIRHVLWPTALPYVMTGVRLAAA 185 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFVL 567 A +I +E + + GLG I + + PE+ VLG+LI Sbjct: 186 VALILAITAE------LIIGAPGLGKRIGVAQTSQAVPEMYALIVVTGVLGLLINVGART 239 Query: 568 ALNRFL-WH 575 R L WH Sbjct: 240 VERRALAWH 248 >gi|37525249|ref|NP_928593.1| glycine betaine transporter membrane protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784676|emb|CAE13576.1| Glycine betaine/L-proline transport system permease protein proW [Photorhabdus luminescens subsp. laumondii TTO1] Length = 361 Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S+R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 176 AHSKRAAKIIQPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVIVTIIFAL--PPIVRL 230 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 231 TI---LGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 283 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 284 VVIASMIAVG-------GLGQMVLRGIGRLDM 308 >gi|166154199|ref|YP_001654317.1| ABC transporter permease [Chlamydia trachomatis 434/Bu] gi|166155074|ref|YP_001653329.1| ABC transporter permease [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335445|ref|ZP_07223689.1| ABC transporter permease [Chlamydia trachomatis L2tet1] gi|165930187|emb|CAP03671.1| ABC transporter permease [Chlamydia trachomatis 434/Bu] gi|165931062|emb|CAP06625.1| ABC transporter permease [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 589 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + +++Q + N P +L E ++ + WQK + L +P +P + + ++MS F +A Sbjct: 130 LALTIHQGIKNSPEELLEQFTLYQATTWQKLFKLRIPNGLPHIFSGLKIAMSAAGFATIA 189 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTMLGVIFLYDQLLFRPMIVWS 267 E + G+G I + + D+ L + LT+L + Y LL + Sbjct: 190 GEWVATQS------GLGILILESRRNYDMAMALAGLFVLTVLTLSLFYSVLLLERSTFFF 243 Query: 268 NKFRLERTTGIYPADSWVLYL 288 FR+E+T+ WV L Sbjct: 244 --FRMEKTSKRSFGKKWVFAL 262 >gi|118463383|ref|YP_879437.1| aliphatic sulfonates ABC transporter permease [Mycobacterium avium 104] gi|254773186|ref|ZP_05214702.1| putative aliphatic sulfonates transport permease protein SsuC [Mycobacterium avium subsp. avium ATCC 25291] gi|118164670|gb|ABK65567.1| putative aliphatic sulfonates transport permease protein SsuC [Mycobacterium avium 104] Length = 233 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 11/126 (8%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L+A +RRL L P + +++P L ++ +++F K++ + A F ++T+ Sbjct: 68 LSAAARRL---LAPTVAAFRTVPSLAWVPLLLLWFGIDETPKILMVAVGAFFPVYTTTA- 123 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +L +I L EV R++ G + +P + P LV + + ++ W FVV Sbjct: 124 -------SALSHIDAHLVEVGRAYGRHGVSLLTAVLLPAAAPELVNGLRLGLANAWLFVV 176 Query: 209 ASEMIV 214 A+E+I Sbjct: 177 AAELIA 182 >gi|253995479|ref|YP_003047543.1| binding-protein-dependent transport systems inner membrane component [Methylotenera mobilis JLW8] gi|253982158|gb|ACT47016.1| binding-protein-dependent transport systems inner membrane component [Methylotenera mobilis JLW8] Length = 258 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 14/173 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + + R++ I L V+ L + + P + ++ +P + F+ Sbjct: 60 ELQSHLHDSLYRLVLGFAIGSLLGLVFGVLMGLFKPIDAFFAPTFNALRQVPTIAFIPML 119 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V+ F K++ AA F I T + Y ++ NIP EVS+ ++LS Sbjct: 120 VMIFGVEETFKIVVVAKAAFFPI--------TLATYDAVKNIPSSYFEVSKVYQLSHVSL 171 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 + +P ++P ++ + +++ W +VA+E+I GIG + + Sbjct: 172 VRQVILPATVPPILTGLRLALGRSWMVLVAAELIAADS------GIGQMMEMG 218 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 30/154 (19%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++R+V+ I S++ + G+ +G I + P L P F P+ Sbjct: 68 SLYRLVLGFAIGSLLGLVFGVLMGLFKPIDAFFAPTFNALRQVPTIAFIPM--------- 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFP-------------NDFKEVASSFHITGWR 492 L+MIFG + V+A A+ FP + + EV+ + ++ Sbjct: 119 --------LVMIFGVEETFKIVVVAKAAFFPITLATYDAVKNIPSSYFEVSKVYQLSHVS 170 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 R +ILP P +TG A G +W + +E+ Sbjct: 171 LVRQVILPATVPPILTGLRLALGRSWMVLVAAEL 204 >gi|153955011|ref|YP_001395776.1| ABC transporter permease [Clostridium kluyveri DSM 555] gi|146347869|gb|EDK34405.1| Predicted ABC transporter, permease component [Clostridium kluyveri DSM 555] Length = 258 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ I+++ II I G+ G + ++P + A P V ++++ V + Sbjct: 75 SVIRVIIGILLSVIIGIVFGLTAGLNKFVEELLEPVVITVKATP--VISIIIIALVWFNS 132 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N ++ ++L+ F + NV+ G + ++A+ F + + I LP I Y Sbjct: 133 SNVVIFTAILICFPIVYT---NVLQGIKSIDKSLIQMANVFKVKRKYVLKDIYLPSIKNY 189 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 V+G + G W S+ SEV S I + GL A++T Sbjct: 190 IVSGILMCMGIGWKVSVASEVLS---IPRYSIGLNLLSAKTT 228 >gi|116050271|ref|YP_790912.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|296389262|ref|ZP_06878737.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|313110773|ref|ZP_07796630.1| putative sulfonate ABC transporter, permease protein [Pseudomonas aeruginosa 39016] gi|115585492|gb|ABJ11507.1| putative sulfonate ABC transporter, permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310883132|gb|EFQ41726.1| putative sulfonate ABC transporter, permease protein [Pseudomonas aeruginosa 39016] Length = 254 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ F W IL N AG + +++ S T W R +ILPGI + +TG A Sbjct: 129 LLAFAALWPILLNTAAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAI 188 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 G W + E+ + GLG YI ++ ++ ++ E++ Sbjct: 189 GILWIVLVPCEMLGV------SAGLGYYILDTRDRLAYSELM 224 >gi|268319161|ref|YP_003292817.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus johnsonii FI9785] gi|262397536|emb|CAX66550.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus johnsonii FI9785] Length = 515 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 10/129 (7%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKV 131 L A++I+++ T A + ++ + I I+Q+IP L L + + + P V Sbjct: 28 LIALLIAMVITIPLAFILKGHKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPA-V 86 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 I L AI IF + Y L IP +LEE + + L+ W+K L +P +MP Sbjct: 87 IALVLYAIMPIFQN--------TYSGLTEIPENLEEAATALGLTKWKKLQRLEIPMAMPM 138 Query: 192 LVWNMMMSM 200 +V + +++ Sbjct: 139 IVAGIRIAL 147 >gi|117164559|emb|CAJ88105.1| putative transport system integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 311 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 14/221 (6%) Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + + + +L IW ++ R ++ ++A I P+G+ + + + + P L Sbjct: 96 VADAWRQGTLLDYIW---TSVSRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPILSGLQ 152 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 + P+ + P V + LN N + +++ G I ++AG P F + Sbjct: 153 SLPSVAWVP---PAVLWLGLN-NSMMYAVILLGAVPSIANGLVAGIDQIPPLFLRAGRTL 208 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAE 545 TG R +I++PG P Y+ G +W + + +E +AS + + GLG + Sbjct: 209 GATGLRGAWHIVMPGALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV---GLGQLLEN 265 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 S +V L + ++ +A++ ++ PL R LR Sbjct: 266 GRNNASISQVFLAIFLILLVGIAIDLLIFSPLE---RRVLR 303 >gi|115377139|ref|ZP_01464353.1| phosphate ABC transporter, permease protein PstC [Stigmatella aurantiaca DW4/3-1] gi|115365848|gb|EAU64869.1| phosphate ABC transporter, permease protein PstC [Stigmatella aurantiaca DW4/3-1] Length = 296 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 42/210 (20%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFL-----------TFTVVYFMNLYPGKVIGAELAAIF 140 RRL L PI++++ IP +LGF TF Y +N +G LA + Sbjct: 100 RRLREFLKPIIELLAGIPSVVLGFFALMVLATLLQDTFGFTYRLNAVVAG-LGLALAIVP 158 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV------- 193 IFT +L +PR E S + + W+ W + +P + PG++ Sbjct: 159 VIFTVA--------EDALTAVPRSYREASLALGATPWETAWKVVLPAAAPGILAACVLGF 210 Query: 194 -----WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 M++ M+ G +V+S + GD+V L + IA + E + + Y++L Sbjct: 211 GRAIGETMIILMASGNAAIVSSSL---GDSVRSL---SATIAAEMGEVVVGSPHYSLLFF 264 Query: 249 LGV-IFLYDQLLFRPMIVWSNKFRLERTTG 277 +GV +F++ +L VW+ K L+R TG Sbjct: 265 IGVELFVFTFVLNMVASVWTKKV-LKRLTG 293 >gi|307296891|ref|ZP_07576708.1| binding-protein-dependent transport systems inner membrane component [Sphingobium chlorophenolicum L-1] gi|306877612|gb|EFN08839.1| binding-protein-dependent transport systems inner membrane component [Sphingobium chlorophenolicum L-1] Length = 272 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ ++I + + +A SR + + P++ I ++IP L +V+F K Sbjct: 81 RVAIGLLIGVSLGLILGLVAGLSRAGELAVDPLMQIKRTIPALALTPLFIVWFGIGETPK 140 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V +F ++ ++Y + + L + ++SF LS W++ W++ +P ++P Sbjct: 141 VALIAFGTVFPVY--------LNLYSGIRGVDLRLLDAAKSFGLSRWEQIWHVVLPSALP 192 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 L+ + ++S +V +E I Sbjct: 193 SLLVGLRYALSVAILVLVVAEQI 215 >gi|260867106|ref|YP_003233508.1| alkanesulfonate transporter subunit [Escherichia coli O111:H- str. 11128] gi|257763462|dbj|BAI34957.1| alkanesulfonate transporter subunit [Escherichia coli O111:H- str. 11128] Length = 263 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLAPIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQLLERLWLRWNPAYHLKEAT 262 >gi|254453772|ref|ZP_05067209.1| glycine betaine/proline ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198268178|gb|EDY92448.1| glycine betaine/proline ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 687 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 19/172 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 AA S + ++ PI DI+Q++P L ++ F + A+ AI + Sbjct: 525 AATSDTVSRIIRPINDILQTLPQFVLLIPALMLFQV--------GDFTALLAIIAYAIVP 576 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 M Q L +P L + ++ S WQ FW + +P S+P +++ ++ +V+ Sbjct: 577 MIRYTEQGLRAVPSTLVDAGKACGCSAWQLFWDVRLPISLP----QILIGINQTILYVLG 632 Query: 210 SEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +I +VG T G+G I +A+ + D A + A M + D++L Sbjct: 633 MLVIAALVGTT-----GLGQAIYVALSQADAGAGIVAGFGMALIAMTADRIL 679 >gi|83593811|ref|YP_427563.1| binding-protein dependent transport system inner membrane protein [Rhodospirillum rubrum ATCC 11170] gi|83576725|gb|ABC23276.1| Binding-protein-dependent transport systems inner membrane component [Rhodospirillum rubrum ATCC 11170] Length = 357 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 25/155 (16%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QV 147 L A+S RL + P+LD MQ+ P +L V+ F G V G + IFA+ ++ Sbjct: 153 LMARSDRLAKLSRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFALPPLIRL 209 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203 N+ + +P DL E +RSF S Q + +P ++P G+ +M+++S Sbjct: 210 TNL------GIRQVPEDLVEAARSFGASKTQLLTKVQLPLALPTIMAGINQTLMLALS-- 261 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 262 --MVVIASMIAVG-------GLGQMVLRGIGRLDM 287 >gi|167566227|ref|ZP_02359143.1| taurine ABC transporter, permease protein [Burkholderia oklahomensis EO147] Length = 285 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 12/170 (7%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVGI I + + P + P + PL+V + +L+I+ T Sbjct: 111 IPVGILIATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDAS-----KILLIYLTM 165 Query: 462 WYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 + L AGA+ A+S T ++ R+++LP P +TG A G W+ Sbjct: 166 FAPLTIATAAGANGVSASRVRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWST 225 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ + T GLG + ++ VV G+L++ LAL Sbjct: 226 LVAAELIA------ATRGLGFMVYSASRFLVTDVVVAGILVIGAIALALE 269 >gi|261822715|ref|YP_003260821.1| glycine/betaine ABC transporter [Pectobacterium wasabiae WPP163] gi|261606728|gb|ACX89214.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium wasabiae WPP163] Length = 400 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 216 ARSERAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 270 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 271 TI---LGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 323 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 324 VVIASMIAVG-------GLGQMVLRGIGRLDM 348 >gi|121603490|ref|YP_980819.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] gi|120592459|gb|ABM35898.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] Length = 287 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 17/170 (10%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA-AIFAIFTSQVWNMT 151 SR + P D++ +P+LG++ +++ +G E A + A+ + V + Sbjct: 120 SRTFKAYVFPTFDVLAQLPVLGWIPLLIIF---------VGIEEALKVTAVSIAVVVPVA 170 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 S + NIP+ L EV R ++ S Q + +P + P L + + W V+ E Sbjct: 171 LSTLSGIANIPQALLEVGRVYQFSALQTIRRIVLPAAAPSLFTGLRQGVMQAWISVIFVE 230 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 ++ + G+G ++A + + ++ AML +GV+ + +L R Sbjct: 231 LLSSSE------GLGFFMAYSRSLSQIDMVIVAMLA-IGVVGIVIELGLR 273 >gi|332968101|gb|EGK07188.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Desmospora sp. 8437] Length = 316 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGF--LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 VL P+++++ IP + GF LT + Y N + G + LA + + + +T Sbjct: 133 VLQPVIELLVGIPSVVYGFIGLTLLIPYIRNTHGGSGF-SLLAGVIVLSVMILPTITSIA 191 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L NIPR + E S + + WQ + + S+PGL+ +++ M+ + +A +M++ Sbjct: 192 VDTLQNIPRKIREASYALGATRWQTIRRVLIRTSLPGLMTGVVLGMARAFGEALAVQMVI 251 Query: 215 VGDTVIP 221 IP Sbjct: 252 GNSGQIP 258 >gi|194017644|ref|ZP_03056255.1| glycine betaine transport system permease protein opuAB [Bacillus pumilus ATCC 7061] gi|194010916|gb|EDW20487.1| glycine betaine transport system permease protein opuAB [Bacillus pumilus ATCC 7061] Length = 284 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +L+A+VIS++ A++ + ++ PILD+MQ++P +L ++F N+ Sbjct: 95 QTLALVLTAVVISIVIGVPIGIWASQKETVRKIVTPILDLMQTMPAFVYL-LPAIFFFNI 153 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IF++ MT + +P DL E + +F + +Q+ + + +P Sbjct: 154 --GVVPGVVASVIFSM--PPTIRMTI---LGIKQVPADLIEATEAFGSTTFQRLFKVQLP 206 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + ++ + S+ ++A M+V+ ++ PG+GS + A+ + Sbjct: 207 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 248 >gi|312138775|ref|YP_004006111.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311888114|emb|CBH47426.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 280 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 10/157 (6%) Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + QD L +++ RV++ ++ ++ + +G+ GF + I P Q+L Sbjct: 75 SDGSLQDAL------AVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTV 128 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P PL + P ++L + G + + N+ AG + E A + + Sbjct: 129 PFLGLIPLFIIWFGIGE-QPKVFL---VALGVLFPLYLNLFAGIRSIDGKLIEAAETLGL 184 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 ++ +++LPG P +TG + G AW A IV+E Sbjct: 185 NKFQLALHVVLPGALPQALTGLRMSLGVAWLALIVAE 221 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 29/143 (20%), Positives = 71/143 (49%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L V+ +L + LA SR + + + P + +++++P LG + +++F Sbjct: 89 RVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTVPFLGLIPLFIIWFG------ 142 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E +F + ++ + +++ + +I L E + + L+ +Q ++ +P ++P Sbjct: 143 -IG-EQPKVFLVALGVLFPLYLNLFAGIRSIDGKLIEAAETLGLNKFQLALHVVLPGALP 200 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + + MS+ W ++ +E I Sbjct: 201 QALTGLRMSLGVAWLALIVAEQI 223 >gi|329296716|ref|ZP_08254052.1| glycine betaine transporter membrane protein [Plautia stali symbiont] Length = 211 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 26 ARSEHASRIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 80 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E S SF S Q + + +P +MP G+ +M+++S Sbjct: 81 TI---LGIKQVPADLIEASESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 133 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 134 VVIASMIAVG-------GLGQMVLRGIGRLDM 158 >gi|297571432|ref|YP_003697206.1| binding-protein-dependent transporters inner membrane component [Arcanobacterium haemolyticum DSM 20595] gi|296931779|gb|ADH92587.1| binding-protein-dependent transport systems inner membrane component [Arcanobacterium haemolyticum DSM 20595] Length = 250 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 4/146 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V+ + A++I IPVG I S+ ++PF A PA F PL+V V Y Sbjct: 60 TLHVAVIGSLTAALIGIPVGFGIAHFAPFSAALEPFLAASQAIPAVAFAPLLVLWVG-YG 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + L +LM+ + I+ N G D A +G R YI P P Sbjct: 119 TTPIVLLCVLMVV---FPIIINTAVGVRDVDPDLIAAARLDGASGMRLMSYIEFPLALPG 175 Query: 506 YVTGAITACGGAWNASIVSEVASWGH 531 + G T + ++V E+ G Sbjct: 176 ILAGIRTGFTLSVTGAVVGELVIGGQ 201 >gi|163853134|ref|YP_001641177.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|163664739|gb|ABY32106.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] Length = 283 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A SRR PILD+MQ++P + VY + P +GA ++A FA V + Sbjct: 117 ALSRRAWRTFSPILDMMQTLP-------SFVYLIPALPFFGLGA-VSACFATIVFSVAPV 168 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + N+P +L E S +F S QK + + +P ++P G+ MM+++S Sbjct: 169 IRLTALGIRNVPSELVEASDAFGSSATQKLFKVQLPLALPTIMAGVNQTMMLALS----M 224 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + +I+ + A A + ++ V + D++ Sbjct: 225 VVIAAMIGAG-------GLGRAVWQSIQRLEAGAGFEAGIGIVIVAVILDRV 269 >gi|254975947|ref|ZP_05272419.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26] gi|255093334|ref|ZP_05322812.1| ABC transporter, permease protein [Clostridium difficile CIP 107932] gi|255101513|ref|ZP_05330490.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42] gi|255307387|ref|ZP_05351558.1| ABC transporter, permease protein [Clostridium difficile ATCC 43255] gi|255315080|ref|ZP_05356663.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55] gi|255517750|ref|ZP_05385426.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34] gi|255650863|ref|ZP_05397765.1| ABC transporter, permease protein [Clostridium difficile QCD-37x79] gi|306520756|ref|ZP_07407103.1| ABC transporter, permease protein [Clostridium difficile QCD-32g58] Length = 209 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L + +LLF + S+ VL P++D ++ +PI+ ++ T+V+F Sbjct: 77 TLQRVLKGFMYALLFGLPIGFIMGFSKTFERVLSPVVDSVRQVPIMAWVPLTIVWFG--- 133 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG + IF I S V+ + + Q + I +D +RS S F + VP Sbjct: 134 ----IG-DGPTIFLIAFSGVFPIILNTIQGVRAISKDYYNAARSMGASPIVIFTNVIVPA 188 Query: 188 SMPGLVWNMMMSMSGGWFFVV 208 S+P ++ +++S GW V+ Sbjct: 189 SLPDILTGSRIAISTGWMSVI 209 >gi|50120492|ref|YP_049659.1| putative sulfate ester transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49611018|emb|CAG74463.1| putative sulfate ester transporter, permease component [Pectobacterium atrosepticum SCRI1043] Length = 529 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SRR +L P + + IP LG++ +V F G G +LA I V Sbjct: 101 GASRRAEHLLHPTVYALAQIPTLGWIPLFMVLF-----GIDDGLKLAVIIKAVIIPV--- 152 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T + N+P L+EV+R+ RL Q+ L +P + P + + +++S W ++ Sbjct: 153 TLHTQTGVRNVPHALQEVARTLRLPWHQRLVKLTLPAAFPTWLTGLRLALSQAWVSLIVV 212 Query: 211 EMI 213 E++ Sbjct: 213 ELL 215 >gi|152975750|ref|YP_001375267.1| binding-protein-dependent transport systems inner membrane component [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024502|gb|ABS22272.1| binding-protein-dependent transport systems inner membrane component [Bacillus cytotoxicus NVH 391-98] Length = 283 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 40/260 (15%) Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVNHFTYQDVLYVIWLGCIT 386 FL+L S + DIF +A+QS+ G + NH + I+ Sbjct: 50 GFLELVSKTVLPTPWDIF-----------LAFQSLVQTGELFNHLS------------IS 86 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 +FR V I + + +G +GF + P Q+L P PL V + Sbjct: 87 VFRAAVGFFIGGSLGVVLGTIVGFSTRSEQYLDPSIQMLRTVPHLAVAPLFVLWFGFGET 146 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + LL+ G + + N G + +VA + + +I+P P Sbjct: 147 SK----VLLIADGAFFPLYVNTFLGIRGVDSKLFDVARVLEFSKRKLITKLIIPAALPNL 202 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 + GA + G AW + +V+E+ T G+G I ++ + + V +G++I Sbjct: 203 LLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAF-- 254 Query: 567 LALNRFLWHPLYLYGTRCLR 586 + +F + L RCL+ Sbjct: 255 --VGKFSDSLVRLLEVRCLK 272 >gi|293394761|ref|ZP_06639052.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291422712|gb|EFE95950.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 393 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+SR V+ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 208 ARSRHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 262 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 263 TI---LGINQVPADLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 315 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 316 VVIASMIAVG-------GLGQMVLRGIGRLDM 340 >gi|170017667|ref|YP_001728586.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc citreum KM20] gi|169804524|gb|ACA83142.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc citreum KM20] Length = 568 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A VISL+ + AKS + V+ PILD MQ++P +L V +F + + PG Sbjct: 102 ASVISLVIGIPLGIITAKSPKTAAVVKPILDFMQTMPGFVYLIPAVAFFGIGVVPG---- 157 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 +FA + M + +P L E + SF + WQK L +P + + Sbjct: 158 -----VFASIIFALPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNTIL 212 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G +M+++S +VV ++I PG+G + A++ ++ Sbjct: 213 AGANQTIMLALS-----------MVVTASMIGAPGLGRGVLSAVQHANI 250 >gi|325676528|ref|ZP_08156206.1| sulfonate ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325552706|gb|EGD22390.1| sulfonate ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 280 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 10/157 (6%) Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + QD L +++ RV++ ++ ++ + +G+ GF + I P Q+L Sbjct: 75 SDGSLQDAL------AVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTV 128 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P PL + P ++L + G + + N+ AG + E A + + Sbjct: 129 PFLGLIPLFIIWFGIGE-QPKVFL---VALGVLFPLYLNLFAGIRSIDGKLIEAAETLGL 184 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 ++ +++LPG P +TG + G AW A IV+E Sbjct: 185 NKFQLALHVVLPGALPQALTGLRMSLGVAWLALIVAE 221 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 29/143 (20%), Positives = 71/143 (49%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L V+ +L + LA SR + + + P + +++++P LG + +++F Sbjct: 89 RVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTVPFLGLIPLFIIWFG------ 142 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E +F + ++ + +++ + +I L E + + L+ +Q ++ +P ++P Sbjct: 143 -IG-EQPKVFLVALGVLFPLYLNLFAGIRSIDGKLIEAAETLGLNKFQLALHVVLPGALP 200 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + + MS+ W ++ +E I Sbjct: 201 QALTGLRMSLGVAWLALIVAEQI 223 >gi|293606733|ref|ZP_06689086.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814883|gb|EFF74011.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 280 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 12/199 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +A+++ IP+G IG + PF Q+L + PL + Y Sbjct: 92 SVARVLTGFSLAALVAIPLGFLIGMSKTVYRAFDPFIQVLKPISPLAWMPLAL-----YT 146 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ +IF + W +L N G A D+ VA + ++ R +ILP P Sbjct: 147 IKDADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALQVILPAAAP 206 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG + G AW + +E+ G TG+G ++ S ++ +L + Sbjct: 207 TIMTGMRISVGIAWLVIVAAEMLIGG------TGIGYFVWNEWNNLSIANIICAILFIGL 260 Query: 565 FVLALNRFLWHPLYLYGTR 583 + L+ L L R Sbjct: 261 IGMLLDTVLARAARLVSYR 279 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 84/191 (43%), Gaps = 14/191 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L+ ++ L L S+ + P + +++ I L ++ + + Sbjct: 95 RVLTGFSLAALVAIPLGFLIGMSKTVYRAFDPFIQVLKPISPLAWMPLALYTIKD----- 149 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A+ +AIF IF +W M + + + +D V+R+ +S + + +P + P Sbjct: 150 ---ADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALQVILPAAAP 206 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ M +S+ W +VA+EM++ G GIG ++ + I+ A+L + Sbjct: 207 TIMTGMRISVGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSIANIICAILFIGL 260 Query: 251 VIFLYDQLLFR 261 + L D +L R Sbjct: 261 IGMLLDTVLAR 271 >gi|241896021|ref|ZP_04783317.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Weissella paramesenteroides ATCC 33313] gi|241870752|gb|EER74503.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Weissella paramesenteroides ATCC 33313] Length = 575 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 31/156 (19%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149 AK+ + ++ PILD MQ++P +L V +F + + PG +F S ++ Sbjct: 122 AKNETVNKIIQPILDFMQTMPAFVYLIPAVAFFGIGVVPG------------VFASVIFA 169 Query: 150 MTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM----PGLVWNMMMSMSG 202 + ++ S + +P DL E + SF +G QK + + +P + G+ +M+++S Sbjct: 170 LPPTVRMSNLGIRQVPTDLVEAADSFGSTGKQKLFKVELPLAQGTIFSGINQTLMLALS- 228 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ D+ Sbjct: 229 ---------MVVIA-SMIGAPGLGRGVLSAVQNADI 254 >gi|222081388|ref|YP_002540751.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84] gi|221726067|gb|ACM29156.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84] Length = 266 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 8/142 (5%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 +R ++ +I + V+ T A SR +L P + ++ I +L ++ V+F Sbjct: 74 MRNIAGFLIGCVIGIVFGTFLALSRIADRLLAPTFNGLKQISLLAWIPLISVWFGFGEQA 133 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 K++ LA+ I + Y + + P DL EV R+ + + Q+ + +P +M Sbjct: 134 KIVFVALASFIPI--------ALNTYDGMRDAPEDLIEVGRALKFNARQRVLRIYLPSAM 185 Query: 190 PGLVWNMMMSMSGGWFFVVASE 211 P + + + W V +E Sbjct: 186 PSTATGVHLGLIYAWLATVGAE 207 >gi|218531939|ref|YP_002422755.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|218524242|gb|ACK84827.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 283 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A SRR PILD+MQ++P + VY + P +GA ++A FA V + Sbjct: 117 ALSRRAWRTFSPILDMMQTLP-------SFVYLIPALPFFGLGA-VSACFATIVFSVPPV 168 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + N+P +L E S +F S QK + + +P ++P G+ MM+++S Sbjct: 169 IRLTALGIRNVPSELVEASDAFGSSATQKLFKVQLPLALPTIMAGVNQTMMLALS----M 224 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + +I+ + A A + ++ V + D++ Sbjct: 225 VVVAAMIGAG-------GLGRAVWQSIQRLEAGAGFEAGIGIVIVAVILDRV 269 >gi|89097937|ref|ZP_01170824.1| ABC transporter (permease) [Bacillus sp. NRRL B-14911] gi|89087439|gb|EAR66553.1| ABC transporter (permease) [Bacillus sp. NRRL B-14911] Length = 253 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 20/205 (9%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPG 129 R+L + ISL+ L AKS+ L ++ +QS+P + +L +++F +N Sbjct: 61 RLLIGLGISLVLGSALGILLAKSKTADETLGTVILALQSVPSIVWLPLAIMWFGLN---- 116 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E++ IF + + MT +M + N+ +++ SG F + P S+ Sbjct: 117 -----EVSVIFVVILGGTFVMTLNMRVGIKNVSPLFIRAAQTMGSSGIDLFTRVIFPASI 171 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P +V ++ + W ++A E++ G PG+G + A D+ ++ M+ + Sbjct: 172 PYVVTGARLAWAFAWRALMAGELLSTG------PGLGYTLRYASDFGDMSLVIAVMIIIG 225 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLER 274 + + DQL+F+ + K LER Sbjct: 226 VIGSIVDQLIFQRI----EKSVLER 246 >gi|260598591|ref|YP_003211162.1| putative osmoprotectant uptake system permease yehY [Cronobacter turicensis z3032] gi|260217768|emb|CBA32203.1| Putative osmoprotectant uptake system permease protein yehY [Cronobacter turicensis z3032] Length = 363 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 14/98 (14%) Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 G+++ P+ + Q+ P LG L V L P A+ A+ + + + Sbjct: 207 GLLMAPLAGLAQAFPALGALG---VSGTGLAP---------ALIALTLYALLPLVRGVVA 254 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 L +P + E +R +S WQ+FW++ VP ++P VW Sbjct: 255 GLGQVPDAVRESARGMGMSAWQRFWHVDVPLALP--VW 290 >gi|327394926|dbj|BAK12348.1| glycine betaine/L-proline transport system permease protein proW [Pantoea ananatis AJ13355] Length = 383 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 199 ARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 253 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E S SF S Q + + +P +MP G+ +M+++S Sbjct: 254 TI---LGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 306 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 307 VVIASMIAVG-------GLGQMVLRGIGRLDM 331 >gi|300786191|ref|YP_003766482.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Amycolatopsis mediterranei U32] gi|299795705|gb|ADJ46080.1| permease component of ABC-type nitrate/sulfonate/bicarbonate transport system [Amycolatopsis mediterranei U32] Length = 280 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 9/178 (5%) Query: 403 PVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 P+G+ IG +RP ++ +QP +L A P+ + L+ L+++ Sbjct: 104 PLGLLIGWYRP-VARFLQPLLELARNTAALALLPVFTLLLGIGELSK----VSLVVYACV 158 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W +L N IAG + + A S ++ R +R +ILP P TG A + Sbjct: 159 WPVLLNTIAGVNTVDPLLVKAARSLGLSSPRLFRKVILPSAVPTVFTGIRMAASYSILVL 218 Query: 522 IVSEV--ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF-LWHP 576 + +E+ A G +L T + + G VLGVL+ FV RF W P Sbjct: 219 VAAEMVGAKAGLGYLINTSQVNFQIQQMYAGILAVSVLGVLVNSGFVALERRFSTWRP 276 >gi|296157685|ref|ZP_06840519.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295891931|gb|EFG71715.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 280 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 33/177 (18%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475 Q++ PA PLV+ LW + L+ G + I N G + Sbjct: 120 QMVRNIPALAMIPLVI-----------LWFGIEEEAKVFLVALGVFFPIYVNTFHGIRSV 168 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E+A S+ + G+ +R++ILPG P + G A G W IV+E S Sbjct: 169 DANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 222 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTR 583 +G+G + E VV+G+L+ VLA L R WHP Y G + Sbjct: 223 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAK 279 >gi|291618547|ref|YP_003521289.1| ProW [Pantoea ananatis LMG 20103] gi|291153577|gb|ADD78161.1| ProW [Pantoea ananatis LMG 20103] Length = 388 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 204 ARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E S SF S Q + + +P +MP G+ +M+++S Sbjct: 259 TI---LGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 311 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336 >gi|317133321|ref|YP_004092635.1| binding-protein-dependent transport systems inner membrane component [Ethanoligenens harbinense YUAN-3] gi|315471300|gb|ADU27904.1| binding-protein-dependent transport systems inner membrane component [Ethanoligenens harbinense YUAN-3] Length = 263 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y+VN F + I I+ +R+ + ++A II +P+GI G + IQPF++ L Sbjct: 54 YLVNAFATGSIWGDI---GISSYRIFMGFLVAVIIGVPLGILAGTFHFAEALIQPFSEFL 110 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P F PL+ + + + ++++ + GT + ++ + A P+D + ++ Sbjct: 111 RYMPVPAFVPLI---MVWCGIGETAKIAVIFL-GTLFQLIPMMADNVRAVPDDL--LGAA 164 Query: 486 FHITGWRW--WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + + G R R +ILP I P + G AW V+E+ + +GLG I Sbjct: 165 YTLGGGRSLVLRRVILPAIAPSTMNTLRIMLGWAWTYLTVAELVA------ANSGLGYNI 218 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNR 571 ++ + G+LI+ L +R Sbjct: 219 LKAQRFLRTDAIFGGILIIGVLGLLCDR 246 >gi|222082372|ref|YP_002541737.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727051|gb|ACM30140.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 295 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 17/193 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT + ++S+ L A+S + ++ PILD+MQ++P +L V M L Sbjct: 102 RTVSMIFVCTILSIAIGIPIGILMARSNTVQRIINPILDVMQTMPSFVYLIPVV---MLL 158 Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GKV G I+AI ++ ++ + + +D+ E + +F S QK + + + Sbjct: 159 GIGKVPGLIAVVIYAIPPMIRLTDLGIRL------VDKDVLEAADAFGTSNAQKLFKVQL 212 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P ++ + ++ VV + MI V G+G + AI Q ++ Sbjct: 213 PLALPTIMAGINQTIMMALAMVVVASMIGV-------QGLGQPVLKAIANQYFTLGMFNG 265 Query: 246 LTMLGVIFLYDQL 258 L ++G+ ++D++ Sbjct: 266 LAIVGIAVIFDRV 278 >gi|152985765|ref|YP_001348292.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150960923|gb|ABR82948.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 254 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ F W IL N AG + +++ S T W R +ILPGI + +TG A Sbjct: 129 LLAFAALWPILLNTAAGVRQLDPRWLQLSRSLAATPWETLRRVILPGILGHVLTGVRLAI 188 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 G W + E+ + GLG YI ++ ++ ++ E++ Sbjct: 189 GILWIVLVPCEMLGV------SAGLGYYILDTRDRLAYSELM 224 >gi|75674654|ref|YP_317075.1| binding-protein dependent transport system inner membrane protein [Nitrobacter winogradskyi Nb-255] gi|74419524|gb|ABA03723.1| Binding-protein-dependent transport systems inner membrane component [Nitrobacter winogradskyi Nb-255] Length = 285 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 10/178 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV++ + +A +I +PVG+ +G +++ P Q L + P+ V Sbjct: 94 VSLRRVLIGLALALLIGVPVGLAVGSYSRLNTATSPAFQFLRMISPLSWMPIAVMVFGVG 153 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P + ++ F W I+ N G + +A S T W Y+ILPG+ Sbjct: 154 D-QP---IYFMLAFAAVWPIMLNTAEGVRRLQPSWLSLADSLAATRWETLCYVILPGVLG 209 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + +TG A G W + E+ + GLG +I ++ ++ ++ E++ VL++ Sbjct: 210 HVLTGLRLAVGIVWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMATVLMI 261 >gi|221197847|ref|ZP_03570893.1| aliphatic sulfonates ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221204595|ref|ZP_03577612.1| aliphatic sulfonates ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221213026|ref|ZP_03586002.1| aliphatic sulfonates ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221167239|gb|EED99709.1| aliphatic sulfonates ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221175452|gb|EEE07882.1| aliphatic sulfonates ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221181779|gb|EEE14180.1| aliphatic sulfonates ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 269 Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + E+ Sbjct: 109 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDASLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R++ILPG P + G A G W IV+E S +G+G Sbjct: 165 AKSYGVRGFALYRHVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 218 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G + Sbjct: 219 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGAKA 269 >gi|254472399|ref|ZP_05085799.1| choline ABC transporter, permease protein [Pseudovibrio sp. JE062] gi|211958682|gb|EEA93882.1| choline ABC transporter, permease protein [Pseudovibrio sp. JE062] Length = 281 Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 14/141 (9%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 + T +LS+ I +L +A + + P+LD+MQ+IP +L ++ F + Sbjct: 94 TETLALILSSTFICMLIGIPVGVYSAHHPKFFSWVRPVLDLMQTIPTFVYLIPALILFGL 153 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + PG + A +I +Q+ + + P+ L E +F + WQK + + Sbjct: 154 GVVPGLISTVVFALPASIRLTQI---------GVASTPKHLLEAGEAFGATYWQKLFKIE 204 Query: 185 VPFSMP----GLVWNMMMSMS 201 +P+++P GL +M+S+S Sbjct: 205 LPYALPNIMAGLTQTIMLSLS 225 >gi|325289658|ref|YP_004265839.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324965059|gb|ADY55838.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 271 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 90/205 (43%), Gaps = 18/205 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L ++ + LR+L ++++ V SR L + + +++ IP + ++ Sbjct: 69 QLAKHVGISILRVLEGYSLAVVLGIVLGVAIGLSRSLNRITDFTIQLLRPIPPIAWIPLA 128 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F E + IF IF + + ++ + + L EVS+ S W+ Sbjct: 129 IIWFGV--------EEESKIFLIFLGGFFPILLNVTDGIRQTEQKLVEVSKVLEASLWRF 180 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQD 237 + L +P ++P ++ + + + W VVA+E+I GIG I A + + D Sbjct: 181 IFRLVIPGALPSIMTGLRIGIGSAWLCVVAAELIAADR------GIGYMIMDARQLLQTD 234 Query: 238 LLAILYAMLTMLGVIF--LYDQLLF 260 L+ + + ++G I L QL F Sbjct: 235 LVIVGMITIGLIGKIMDTLLKQLEF 259 Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+ +A ++ I +G+ IG ++ QLL P + PL + ++ Sbjct: 76 ISILRVLEGYSLAVVLGIVLGVAIGLSRSLNRITDFTIQLLRPIPPIAWIPL---AIIWF 132 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + L+ G + IL NV G EV+ + WR+ +++PG P Sbjct: 133 GVEEESKI-FLIFLGGFFPILLNVTDGIRQTEQKLVEVSKVLEASLWRFIFRLVIPGALP 191 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG G AW + +E+ Sbjct: 192 SIMTGLRIGIGSAWLCVVAAEL 213 >gi|306833542|ref|ZP_07466669.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304424312|gb|EFM27451.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 305 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 6/174 (3%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG-MVLVPILDIMQSIP 111 P + +LP T+ +LSA++ + + + S + G +L P ++++ IP Sbjct: 71 PSSGSFGALPMILGSFTVTILSALIATPIAIGAAVFMTEVSPKYGAKILQPAIELLTGIP 130 Query: 112 --ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + GF+ V+ + +++ G G L+ + +F + +TF SL +PR +E Sbjct: 131 SVVYGFIGLQVIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYKE 189 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + PG+ ++ M+ + +A +M+V V+P Sbjct: 190 ASLAMGATRWQTIWRVILNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVVP 243 >gi|295320585|gb|ADG00963.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Clostridium botulinum F str. 230613] gi|322807562|emb|CBZ05137.1| putative ABC transporter, permease protein [Clostridium botulinum H04402 065] Length = 180 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 4/134 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT+ RV+ + A II +P+G+++G ++ I F + P + PL + Sbjct: 47 ITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIG 106 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P ++L + F + ++ N IAG D+ A S W + IILP P Sbjct: 107 D-GPTIFL---ITFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIP 162 Query: 505 YYVTGAITACGGAW 518 +TGA A G W Sbjct: 163 DILTGARIAISGGW 176 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +D ++ +PI+ ++ T+V+F IG + IF I S ++ + + + NI + Sbjct: 84 IDSIRQVPIMAWVPLTIVWFG-------IG-DGPTIFLITFSGIFPVILNTIAGVKNISK 135 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 D +RS W F + +P S+P ++ +++SGGW V+ Sbjct: 136 DYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAISGGWMSVI 180 >gi|226331044|ref|ZP_03806562.1| hypothetical protein PROPEN_04974 [Proteus penneri ATCC 35198] gi|225201839|gb|EEG84193.1| hypothetical protein PROPEN_04974 [Proteus penneri ATCC 35198] Length = 254 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 68 ANSDRASKIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 122 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E ++SF S Q + + +P +MP G+ +M+++S Sbjct: 123 TI---LGIKQVPEDLIEAAQSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 175 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 176 VVIASMIAVG-------GLGQMVLRGIGRLDM 200 >gi|91780304|ref|YP_555511.1| ABC sulfate ester transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91692964|gb|ABE36161.1| ABC sulfate ester transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 272 Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 5/106 (4%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N G A P + E+A F T W+ +R I+LP I P G A +W A++ +E+ Sbjct: 154 NAAQGLEAVPRHYDELADVFRFTRWQRFRRIVLPAIVPSLFNGFYLALVTSWIATLGAEL 213 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G+G + + E +V+LGV ++ A + F Sbjct: 214 -----LMTSGVGIGTVLNDGRENFRMDQVLLGVAVVGLTGFAFHSF 254 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 8/145 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L + I L F +A +R + + P ++ + + ++ +F GK Sbjct: 80 RDLLGLAIGSLCGFGFALFLKSARWIDAAIAPTFHAIRQVALFAWIPLLGTWFGLGEVGK 139 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V+ LAA F ++ + Q L +PR +E++ FR + WQ+F + +P +P Sbjct: 140 VVFISLAAFFPVW--------LNAAQGLEAVPRHYDELADVFRFTRWQRFRRIVLPAIVP 191 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVV 215 L +++ W + +E+++ Sbjct: 192 SLFNGFYLALVTSWIATLGAELLMT 216 >gi|309389354|gb|ADO77234.1| binding-protein-dependent transport systems inner membrane component [Halanaerobium praevalens DSM 2228] Length = 279 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 16/153 (10%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T +++++ I+L+ + A ++ L ++ PILD MQ+IP +L +++F Sbjct: 100 TLASIMTSVFIALIVGIPVGIIKAHNKTLDLITRPILDFMQTIPPFVYLIPALMFF---G 156 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G +FAI + +T Y + + +L+E +F WQ + + +P Sbjct: 157 LGNVSGVIATVVFAI--APPIRLT---YLGIQQVDEELKEAGHAFGAKWWQILFKIELPG 211 Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 +MP G+ +M+S+S VV + MI VG Sbjct: 212 AMPSIMMGINQCIMLSLS----MVVIAAMIGVG 240 >gi|316934163|ref|YP_004109145.1| binding-protein-dependent transporter inner membrane component [Rhodopseudomonas palustris DX-1] gi|315601877|gb|ADU44412.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris DX-1] Length = 295 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A++I IP+G+ IG P + + + P LL P + PL + ++ L P + L Sbjct: 112 LAALIGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPL---SMIFFGLGPKSAV-FL 167 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + IL N + G + E A G + +R ++LP P G Sbjct: 168 VFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCNGPQLFRSVVLPAALPSIFNGLRLGAS 227 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 AW +V E+ GLGA I + Sbjct: 228 FAWILIVVGEMTG------VPEGLGAVIMDG 252 >gi|262275252|ref|ZP_06053062.1| putative sulfonate ABC transporter permease protein [Grimontia hollisae CIP 101886] gi|262220497|gb|EEY71812.1| putative sulfonate ABC transporter permease protein [Grimontia hollisae CIP 101886] Length = 247 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 16/194 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + VIS++ V+ + + L + P+L + +IP L V + Y G Sbjct: 60 RVFLSFVISMVLGVVFGIMMGRFANLNELSDPLLILALNIPAL-------VTILLCYLG- 111 Query: 131 VIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 IG E AA+ A+ +++ + + + + DL +V++ FRLS ++F+ + +P Sbjct: 112 -IGLVETAAVTAVALNKIPTVVAMIREGARVVDDDLMDVAKVFRLSPTKRFFNVFLPQLY 170 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ + +S W V+ E++ + G+G + + D+ IL + Sbjct: 171 PYIMASARTGLSLIWKIVLVVELLGRSN------GVGFKLHTLFQFFDIAGILAYTFAFV 224 Query: 250 GVIFLYDQLLFRPM 263 VIFL + LLFRP+ Sbjct: 225 TVIFLLEALLFRPL 238 >gi|291303052|ref|YP_003514330.1| binding-protein-dependent transporter inner membrane component [Stackebrandtia nassauensis DSM 44728] gi|290572272|gb|ADD45237.1| binding-protein-dependent transport systems inner membrane component [Stackebrandtia nassauensis DSM 44728] Length = 268 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 23/199 (11%) Query: 360 AWQ-----SIGYIVNHFTYQDVLYVIWLGCITMFRVV-----VLII---IASIIWIPVGI 406 AW+ S G ++ FT V V LG ++R V L++ A +I IPVGI Sbjct: 32 AWEIYARVSGGLLIPSFTETAVATVELLGTAELWRAVYVSNQALVLGFGAAVVIGIPVGI 91 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 +G + + + +L P PL+V V + + + +++ I ++ Sbjct: 92 LLGRFRLLERYLDVYLNILLITPMAAIIPLLVMSVGFGLASRVILVAVFAIV----MVVV 147 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N G E+A SF + + W I+LPG P +TG G A ++ E Sbjct: 148 NARTGVRQVDPALIEMARSFGASERQIWTRILLPGALPAIMTGIRLGIGRAITGMVIVE- 206 Query: 527 ASWGHIHLRTTGLGAYIAE 545 + + +T LG I E Sbjct: 207 -----LLMVSTALGGLILE 220 >gi|188533081|ref|YP_001906878.1| glycine betaine transporter membrane protein [Erwinia tasmaniensis Et1/99] gi|188028123|emb|CAO95980.1| Glycine betaine/L-proline transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 387 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 204 ARSQRAAKIIRPMLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 258 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 259 TI---LGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 311 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 312 VVIASMIAVG-------GLGQMVLRGIGRLDM 336 >gi|90415462|ref|ZP_01223396.1| putative nitrate transporter [marine gamma proteobacterium HTCC2207] gi|90332785|gb|EAS47955.1| putative nitrate transporter [marine gamma proteobacterium HTCC2207] Length = 333 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 20/218 (9%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYAT--------LAAKSRRLGMVLVPILDIMQ 108 DV P T + + +++F F+ AT L S + PI+ + Sbjct: 107 DVKVRPYTGKATYFDQIFTSLYTVMFGFLVATFIAIPLGILCGLSENAYRAINPIIQTFK 166 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV---WNMTFSMYQSLCNIPRDL 165 + L +L + LY E A + + FT + W + + +I RDL Sbjct: 167 PVSPLAWLPLVTMVVSALYVSDDPMFEKAFLTSGFTVALCCLWPTVVNTIVGVASINRDL 226 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 +VSR RLS + +P + P + + +S++ GW ++A+EM+ PG+ Sbjct: 227 IDVSRVLRLSSPVYIKTIVIPSATPLIFTGLRLSLATGWMVLIAAEMLAQN------PGL 280 Query: 226 GSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 G +I + L I+ A++T+ + F+ DQL+ Sbjct: 281 GKFIWDEFQNGSSSSLGRIMVAVITIGIIGFILDQLML 318 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 15/201 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V+ ++A+ I IP+GI G + I P Q + PLV VS + Sbjct: 126 SLYTVMFGFLVATFIAIPLGILCGLSENAYRAINPIIQTFKPVSPLAWLPLVTMVVSALY 185 Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + L + W + N I G ++ D +V+ ++ + + I+ Sbjct: 186 VSDDPMFEKAFLTSGFTVALCCLWPTVVNTIVGVASINRDLIDVSRVLRLSSPVYIKTIV 245 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P P TG + W I +E+ + + GLG +I + + GS LG Sbjct: 246 IPSATPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSS--LG 297 Query: 559 VLIMCCFVLALNRFLWHPLYL 579 +++ + + F+ L L Sbjct: 298 RIMVAVITIGIIGFILDQLML 318 >gi|254431616|ref|ZP_05045319.1| integral membrane components of other binding-protein-dependent transport system [Cyanobium sp. PCC 7001] gi|197626069|gb|EDY38628.1| integral membrane components of other binding-protein-dependent transport system [Cyanobium sp. PCC 7001] Length = 275 Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 12/219 (5%) Query: 346 IFWFCVV-CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIP 403 +FW V G+ + S ++ Q V+W + ++ RV +++ + +P Sbjct: 44 VFWTAVTSAGLVDPLFLPSPSGVIAAGQSQAAQGVLWADLVASVGRVFAGFALSAAVALP 103 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +GI +G I ++P L+ PA F PL+ + Y+ L L LL+ GT ++ Sbjct: 104 LGIAMGTSTVICRLLEPLMALIRYMPAPAFIPLL---IIYFGLG-ELPKILLIFIGTLFF 159 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ++ PN+ E A + + +I P I P + AWN IV Sbjct: 160 NTLMIMDAVKFVPNELVETALTLGGRTSQVLLRVITPCITPQVIDTYRINMASAWNLVIV 219 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +E+ + GLG I+ + E+ LG++++ Sbjct: 220 AELVAANE------GLGKRISLAQRFLRTDEIFLGLIVI 252 >gi|58825941|gb|AAW82805.1| putative ABC MSA transporter membrane-associated permease component [Methylosulfonomonas methylovora] Length = 158 Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 4/138 (2%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+ +IA +I IP G+ + + P ++L P + P + + ++ N Sbjct: 9 RVMAGFLIAQLIGIPFGLALAVNRYFRDIFFPPFEILRPIPPLAWVP---AALIFWPTN- 64 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + + + G + I+ NV+ GA + A S W + IILPG P T Sbjct: 65 EMSIIFVTFLGAFFTIVINVLGGARTIDVRYLRAAQSMGANQWHLFSRIILPGTLPSIFT 124 Query: 509 GAITACGGAWNASIVSEV 526 GA G WN + +E+ Sbjct: 125 GAAVGMGITWNVVLAAEM 142 >gi|13476968|ref|NP_108538.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14027731|dbj|BAB54324.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 303 Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 15/140 (10%) Query: 103 ILDIMQSIPILG---FLTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQ 156 I+ ++ IP+LG + T+V+ M L P + + +E A + A+ M ++ Sbjct: 136 IIRMISWIPVLGRNGLINSTLVH-MGLVPKPIEWLLYSEFAVVLAMVHLYTLFMVTPIFN 194 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 +L I R L E +R SGWQ W + +P + PG M+ G FVV M Sbjct: 195 TLMRIDRSLVEAARDAGASGWQVLWNVIIPLAKPG--------MAIGTIFVVTLVMADFS 246 Query: 217 DTVIPLPGIGSYIALAIKEQ 236 + G + +AL +K Q Sbjct: 247 TVQVMSGGQSASVALMMKNQ 266 >gi|325290616|ref|YP_004266797.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324966017|gb|ADY56796.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 259 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 24/203 (11%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++++ I IP+G+ +G + + P +L+ + PL V Sbjct: 71 SLLRIVLAWVLSAFIAIPIGVIMGRIALLEKLLHPVIELIRPISPLAWIPLAV------- 123 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW + +++ + + IL N I+G + SF + R I Sbjct: 124 ----LWFGIGLSGKVFVIVIASLFPILLNTISGIKGVNPILLKAGQSFGFSQLRITTRIC 179 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P VTG + G AW A I +E+ + +GLG I + E V++G Sbjct: 180 LPAAMPTIVTGLRISFGSAWMAIIAAEMVA------SRSGLGYMINDGMEILRPDIVIMG 233 Query: 559 VLIMCCFVLALNRFLWHPLYLYG 581 ++I+ + H L G Sbjct: 234 MVIIGVVGFLFDAVFRHIEKLMG 256 >gi|251788501|ref|YP_003003222.1| glycine betaine transporter membrane protein [Dickeya zeae Ech1591] gi|247537122|gb|ACT05743.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] Length = 400 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R V+ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 214 AHSDRAARVVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 268 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E ++SF S Q + + +P +MP G+ +M+++S Sbjct: 269 TI---LGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 321 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 322 VVIASMIAVG-------GLGQMVLRGIGRLDM 346 >gi|94967858|ref|YP_589906.1| ABC aliphatic sulfonate transporter, inner membrane subunit [Candidatus Koribacter versatilis Ellin345] gi|94549908|gb|ABF39832.1| ABC aliphatic sulfonate transporter, inner membrane subunit [Candidatus Koribacter versatilis Ellin345] Length = 252 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 14/157 (8%) Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 +QSIP + +L +++F E A +F + + +T S+ L +IP+ Sbjct: 97 LQSIPSICWLPVAILWFGL--------TEKAILFVVVMGSLLAITISVESGLRSIPKIYS 148 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 R+ +GW+ ++ +P S+P L+ + + W +++ EMI V G+G Sbjct: 149 LAGRNLGANGWKLMVHVLLPASLPYLISGLKQGWAFAWRSLISGEMIFV------TLGLG 202 Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 + + D+ + ML ++ + +L D L FR + Sbjct: 203 QLLMMGRDLNDISQVFAVMLLIVALGWLVDTLFFRGL 239 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 5/147 (3%) Query: 381 WLG-CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 W+G ++M RV + I+ ++ + +G I + +S L + P+ + P+ Sbjct: 52 WIGITVSMKRVAIGYAISCLLGVGLGFLITYSRFLSETAGRLIVSLQSIPSICWLPV--- 108 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + ++ L L +++ G+ I +V +G + P + + GW+ +++L Sbjct: 109 AILWFGLTEKAIL-FVVVMGSLLAITISVESGLRSIPKIYSLAGRNLGANGWKLMVHVLL 167 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEV 526 P PY ++G AW + I E+ Sbjct: 168 PASLPYLISGLKQGWAFAWRSLISGEM 194 >gi|154151551|ref|YP_001405169.1| binding-protein-dependent transport systems inner membrane component [Candidatus Methanoregula boonei 6A8] gi|154000103|gb|ABS56526.1| binding-protein-dependent transport systems inner membrane component [Methanoregula boonei 6A8] Length = 280 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 15/180 (8%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 +++ RV+V IA + +P+G +G F+ + + P Q+L FP+ ++ + Sbjct: 84 AVSLGRVLVGFFIALAVALPLGFLLGGWFK-SFETAVNPLLQVLGQANPFTLFPVFITLL 142 Query: 442 SYYHLNPNLWLSLLMIFGT-QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L+ + +IF QW +LFN ++G ++A S I W+ +R ++LP Sbjct: 143 GIGELS-----KISIIFWVCQWPVLFNTVSGIKNVDPAIVKMARSMGIGKWQMFRKVLLP 197 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P TG + A+ I +E+ ++GLG I ++ P++ +G++ Sbjct: 198 AAMPSVFTGIRMSAVFAFFMLIGAEMIG------ASSGLGYMILQAQATFQMPKMWVGIV 251 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 41/80 (51%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 EL+ I IF W + F+ + N+ + +++RS + WQ F + +P +MP + Sbjct: 145 GELSKISIIFWVCQWPVLFNTVSGIKNVDPAIVKMARSMGIGKWQMFRKVLLPAAMPSVF 204 Query: 194 WNMMMSMSGGWFFVVASEMI 213 + MS +F ++ +EMI Sbjct: 205 TGIRMSAVFAFFMLIGAEMI 224 >gi|91783327|ref|YP_558533.1| ABC aliphatic sulfonates transporter, innermembrane subunit [Burkholderia xenovorans LB400] gi|91687281|gb|ABE30481.1| ABC aliphatic sulfonates transporter, innermembrane subunit [Burkholderia xenovorans LB400] Length = 280 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 33/177 (18%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475 Q++ PA PLV+ LW + L+ G + I N G + Sbjct: 120 QMVRNIPALAMIPLVI-----------LWFGIEEEAKVFLVALGVFFPIYVNTFHGIRSV 168 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E+A S+ + G+ +R++ILPG P + G A G W IV+E S Sbjct: 169 DANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 222 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTR 583 +G+G + E VV+G+L+ VLA L R WHP Y G + Sbjct: 223 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAK 279 >gi|167462264|ref|ZP_02327353.1| putative ABC transporter, proline/glycine betaine permease protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383435|ref|ZP_08057217.1| ABC transporter proline/glycine betaine permease-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152288|gb|EFX45112.1| ABC transporter proline/glycine betaine permease-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 575 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 27/177 (15%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126 T ++L++ VIS++ L A+ + V+ P+LD MQ++P +L V +F + + Sbjct: 92 TLSQVLTSAVISIVLGVPIGILCARRNGVQKVVTPLLDFMQTMPAFVYLLPAVSFFSLGV 151 Query: 127 YPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 PG + + +FAI T ++ N+ + +P DL E + +F + QK L + Sbjct: 152 VPGVIA----SVVFAIPPTIRLTNL------GIRQVPMDLVEAADAFGSTPMQKLVKLQL 201 Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 P ++P G+ +M+S+S +VV ++I G+GS + A+ + + Sbjct: 202 PLAVPSIMAGINQTIMLSLS-----------MVVISSMIGAQGLGSDVYRAVTQNKI 247 >gi|325291599|ref|YP_004277463.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325059452|gb|ADY63143.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 257 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 6/143 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV ++AS++ +PVGI +G + + ++PF PA+ F PL++ Sbjct: 66 MTIWRVVGGFVLASLVAVPVGIAMGAYKPVEALLEPFVSFARYLPASAFVPLLILWAGIG 125 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+IF G + I+ V + D E A + R +++P Sbjct: 126 EMQ-----KLLVIFIGAVFQIILMVAVAVAGTRRDLVEAAYTLGAKDRGVVRRVLIPANA 180 Query: 504 PYYVTGAITACGGAWNASIVSEV 526 P G AW IV+E+ Sbjct: 181 PDIAEILRLVLGWAWTYVIVAEL 203 >gi|302390752|ref|YP_003826573.1| binding-protein-dependent transport systems inner membrane component [Thermosediminibacter oceani DSM 16646] gi|302201380|gb|ADL08950.1| binding-protein-dependent transport systems inner membrane component [Thermosediminibacter oceani DSM 16646] Length = 254 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 9/146 (6%) Query: 69 TLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +LR++ + + +++ V L R V+ I+ IM +P + L +++F Sbjct: 56 SLRIIGTGLSTAVVLAMVLTLLCMNGRLFPGVITDIMAIMHPLPGIAILPVAILWFG--- 112 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG + A +F I S VW +T Y +IP++ E+ R+ LSG + + +P Sbjct: 113 ----IGVK-AVLFVIVFSAVWPLTNHFYTGFRSIPKNQLEIGRNLGLSGIKLVLSVMLPA 167 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213 S P ++ + + W VA+E++ Sbjct: 168 SFPHILGGLRSGWARAWQASVAAELV 193 >gi|218779229|ref|YP_002430547.1| binding-protein-dependent transport systems inner membrane component [Desulfatibacillum alkenivorans AK-01] gi|218760613|gb|ACL03079.1| binding-protein-dependent transport systems inner membrane component [Desulfatibacillum alkenivorans AK-01] Length = 276 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 16/158 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RV++ ++A + +P+G+ +G+ ++ + ++L P + PL+++ + Sbjct: 65 AISLLRVILGFLLAVLTAVPLGLAMGYFKRVNHMVDSTVEMLRPIPPLAWVPLILAWLGI 124 Query: 444 YHLNPNLW--------------LSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHI 488 + P+++ +L++IF G + IL N I G + P ++ E A + Sbjct: 125 RGV-PDIFPFLATSPIWSGIQFSTLIIIFIGAFFPILLNTIQGVRSIPREYIESARTLGA 183 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 G I++P P VTG G W + +E+ Sbjct: 184 KGLPLLVKILIPASLPLIVTGLRIGLGIGWMCLVAAEM 221 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 20/81 (24%), Positives = 41/81 (50%) Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G + + + IF + + + Q + +IPR+ E +R+ G + +P S+P + Sbjct: 142 GIQFSTLIIIFIGAFFPILLNTIQGVRSIPREYIESARTLGAKGLPLLVKILIPASLPLI 201 Query: 193 VWNMMMSMSGGWFFVVASEMI 213 V + + + GW +VA+EM+ Sbjct: 202 VTGLRIGLGIGWMCLVAAEMM 222 >gi|330505559|ref|YP_004382428.1| ABC transporter permease [Pseudomonas mendocina NK-01] gi|328919845|gb|AEB60676.1| ABC transporter, permease protein [Pseudomonas mendocina NK-01] Length = 274 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 18/194 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 ++LR+L+ I V +L SRRL L P ++++P L ++ +++ Sbjct: 78 SSLRVLAGFAIGASLALVLGSLVGLSRRLEAYLDPTFQALRAVPGLAWVPLLLIWLGIDE 137 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 KV + + F ++ ++ + N+ R L EV LS + VP Sbjct: 138 SSKVTLIAIGSFFPVY--------LNLVAGIRNVDRKLVEVGELCNLSRLATIRRIFVPA 189 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245 + P L + +S W VVA+E++ + GIG + + D + + A Sbjct: 190 AQPYLFTGLRAGLSMAWLCVVAAELLAATE------GIGYLLTDGREVSRPDRVLVAIAT 243 Query: 246 LTMLGVIFLYDQLL 259 L ++G L D LL Sbjct: 244 LAVMG--KLSDSLL 255 >gi|330820626|ref|YP_004349488.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia gladioli BSR3] gi|327372621|gb|AEA63976.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia gladioli BSR3] Length = 293 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L I + F ++A S R+G L+ +L M +P + L +++F L G Sbjct: 102 LLRGYAIGAVLAFALTSVAV-STRIGRDLLSMLTAMFNPLPSIALLPIALLWF-GLGTGS 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + S +W + SMY +P L R++ L G + W + VP ++P Sbjct: 160 LL-------FVLVHSVLWPLALSMYTGFLGVPATLRMAGRNYGLRGLRFVWLILVPAALP 212 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235 >gi|315302494|ref|ZP_07873338.1| glycine betaine transport system permease protein opuAB [Listeria ivanovii FSL F6-596] gi|313629138|gb|EFR97427.1| glycine betaine transport system permease protein opuAB [Listeria ivanovii FSL F6-596] Length = 281 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSNVVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|242238345|ref|YP_002986526.1| glycine betaine transporter membrane protein [Dickeya dadantii Ech703] gi|242130402|gb|ACS84704.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech703] Length = 392 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 + S+R V+ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 208 SHSQRAARVVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 262 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 263 TI---LGIRQVPADLVEAAESFGASPRQMLFKVKLPLAMPTIMAGVNQTLMLALS----M 315 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 316 VVIASMIAVG-------GLGQMVLRGIGRLDM 340 >gi|150399264|ref|YP_001323031.1| binding-protein-dependent transport systems inner membrane component [Methanococcus vannielii SB] gi|150011967|gb|ABR54419.1| binding-protein-dependent transport systems inner membrane component [Methanococcus vannielii SB] Length = 253 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV++ IA+++ IP+GI +G+ ++ I +LL P + PL ++++ Sbjct: 59 ISIKRVLIGFFIAAMVAIPLGILMGYYSIVNELIDTPIELLRPIPPLAWVPL---ALAWF 115 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + ++ G + IL N I+G + P E A + T + +++P P Sbjct: 116 GIGES-SMHFIIFIGAFFPILLNTISGVRSVPLIMIEAAKTLGGTTKHILKSVVIPASSP 174 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG G AW + +E+ Sbjct: 175 DILTGLRVGVGIAWMCVVAAEM 196 >gi|332522360|ref|ZP_08398612.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Streptococcus porcinus str. Jelinkova 176] gi|332313624|gb|EGJ26609.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Streptococcus porcinus str. Jelinkova 176] Length = 575 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +IS++ AKS + ++ PILD MQ++P +L V +F G V Sbjct: 101 VLVASLISIIIGIPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIPAVAFF---GIGMV 157 Query: 132 IGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS-- 188 G + IFA+ T + N+ S NI +L E S +F + QK + +P + Sbjct: 158 PGVFASVIFALPPTVRFTNLGIS------NISTELVEASDAFGSTPRQKLLKVELPLAKN 211 Query: 189 --MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ MM+++S M+V G ++I PG+G + A++ D+ Sbjct: 212 TIMAGINQTMMLALS----------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|270261219|ref|ZP_06189492.1| transporter [Serratia odorifera 4Rx13] gi|270044703|gb|EFA17794.1| transporter [Serratia odorifera 4Rx13] Length = 264 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 49/217 (22%), Positives = 100/217 (46%), Gaps = 23/217 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I V + SR +L + +++++P L + +++ Sbjct: 60 QHLTISSWRALIGFSIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + Y + NI L E++RS+ LSG++ F Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDSGLLEMARSYGLSGFRLFTQ 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VVLPGALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 +LYA+L L + QLL R + W ++L+ Sbjct: 225 VVAIVLYALLGKLADV--SAQLLERVWLRWHPAYQLK 259 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G + E+A S+ ++G+R + ++LPG P + G A Sbjct: 130 LVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571 G W IV+E S +G+G Y+A + + +VV+ +++ + L Sbjct: 190 GFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIVLYALLGKLADVSA 242 Query: 572 -------FLWHPLY 578 WHP Y Sbjct: 243 QLLERVWLRWHPAY 256 >gi|118589797|ref|ZP_01547202.1| glycine betaine/l-proline transport system permease protein prow [Stappia aggregata IAM 12614] gi|118437883|gb|EAV44519.1| glycine betaine/l-proline transport system permease protein prow [Stappia aggregata IAM 12614] Length = 281 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 31/144 (21%), Positives = 68/144 (47%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + T ++++ ++ + +AA R+ VL P+LD+MQ++P +L ++ Sbjct: 91 EETTETLALVMASTIVCMAIGVPIGVVAAHHPRVYAVLRPVLDLMQTLPTFVYLIPALIL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + + I +Q+ + + P L E ++F + Q W Sbjct: 151 FGLGMVPGLIATVIFSIPAPIRLTQL---------GVSSTPTSLLEAGKAFGATNSQLLW 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 202 KIELPYALPQIMAGLTQTIMLSLS 225 >gi|289434283|ref|YP_003464155.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170527|emb|CBH27067.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313633934|gb|EFS00646.1| glycine betaine transport system permease protein opuAB [Listeria seeligeri FSL N1-067] Length = 282 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALIIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|118582203|gb|ABL07480.1| limonene hydroxylase CD3-2 [Enterobacter cowanii] Length = 306 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 148 PLIALLRPVSPLAWLPIGLLLFQR--------AEPASTWTIFICSIWPMILNTAEGVMRI 199 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R +LS + + P +P ++ + +S+ W +VA+EM+ G Sbjct: 200 PQDYLNVARVLKLSEFTVMRKILFPAVLPHILTGVRLSIGIAWLVIVAAEMLTGG 254 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 12/194 (6%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+++ IPVG IG I+ P LL + P + Sbjct: 109 WNVLASLERVALGFGLAALVGIPVGFLIGRFRFIARMFGPLIALLRPVSPLAWLP--IGL 166 Query: 441 VSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + P S IF + W ++ N G P D+ VA ++ + R I+ Sbjct: 167 LLFQRAEPA---STWTIFICSIWPMILNTAEGVMRIPQDYLNVARVLKLSEFTVMRKILF 223 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P + P+ +TG + G AW + +E+ + G G+G +I + +++ + Sbjct: 224 PAVLPHILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVQNIIIAI 277 Query: 560 LIMCCFVLALNRFL 573 L++ +AL + L Sbjct: 278 LLIGVVGMALEQGL 291 >gi|315641134|ref|ZP_07896213.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus italicus DSM 15952] gi|315483142|gb|EFU73659.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus italicus DSM 15952] Length = 579 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 25/149 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R ++ PILD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 120 AKSDRAEKIIQPILDFMQTMPGFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + IP++L E S SF +G Q+ + L +P + + G+ M+++S Sbjct: 177 L------GIRQIPKELVEASDSFGSTGKQRLFKLELPLAKSTILAGINQTTMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIK 234 M+V+ ++I PG+G + A++ Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLSALQ 248 >gi|268323132|emb|CBH36720.1| putative ABC-type sulfonate/taurin/nitrate/bicarbonate transporter, permease protein [uncultured archaeon] Length = 257 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCN 160 PI++I++ IP L ++ +++ IG AA F IF + + Y + Sbjct: 94 PIIEILRPIPPLAWIPVAILW---------IGLTHSAAGFIIFIGAFFPILIDSYTGFRD 144 Query: 161 IPRDLEEVSRSFRLSGWQKF-WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 +P+ L E + G +K Y+ P+++P + + M GW VVA+EM VG+ Sbjct: 145 VPKVLVETGKVLGCIGNRKLIRYVAFPYALPSIATGTRVGMGVGWMCVVAAEMFGVGN 202 >gi|167577393|ref|ZP_02370267.1| taurine ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 283 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IP G+ I + + P + P + PL+V Sbjct: 93 SLARIATAFALALVTAIPAGVLIATNRIVRGAVDPIIEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + R+++LP P Sbjct: 153 AS-----KVLLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRLKLLRHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 +AL Sbjct: 262 IAIALE 267 >gi|126733424|ref|ZP_01749171.1| taurine ABC transporter, permease protein [Roseobacter sp. CCS2] gi|126716290|gb|EBA13154.1| taurine ABC transporter, permease protein [Roseobacter sp. CCS2] Length = 444 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 6/168 (3%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W +G I Y++ LG ++FRV+V ++ +++ IP+G +G P Sbjct: 230 WSRLGEIAT-VGYRNSTLAEHLGY-SLFRVIVGFLLGALVGIPLGYAMGLSNWFRGWFDP 287 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + + P PLV+ + +L+ W + +G S Sbjct: 288 IVEFMRPVPPLALIPLVIIWAGIGEVGK----IILLFLAALWIMAIAARSGVSGVRISKV 343 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 A S + W+ R++I+P P TGA A G W + +E+ + Sbjct: 344 HAAYSLGASKWQIMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA 391 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 17/171 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++ IG E+ I +F + +W M + + + Sbjct: 287 PIVEFMRPVPPLALIPLVIIW-------AGIG-EVGKIILLFLAALWIMAIAARSGVSGV 338 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ ++ +P S+P + ++M W VVA+E++ Sbjct: 339 RISKVHAAYSLGASKWQIMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEK---- 394 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269 G G I +A K Q +L ++ + + F D L+ + ++ W K Sbjct: 395 --GAGMMIMVASKFQSTDIVLMGIILIGIIGFSIDMLMRQAEKWLVPWKGK 443 >gi|333001231|gb|EGK20799.1| putative aliphatic sulfonates transport permease protein ssuC [Shigella flexneri VA-6] Length = 215 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 15/148 (10%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A IF + ++ + + + + NI R L E++RS+ LSG F ++ +P ++P ++ Sbjct: 76 ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPDALPSIMV 135 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248 + ++ W ++ +E I GIG Y+A+ +E D++ ILYA+L Sbjct: 136 GVRFALGLMWLTLIVAETISANS------GIG-YLAMNAREFLQTDVVVVAIILYALLGK 188 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTT 276 L + QLL R + W+ + L+ T Sbjct: 189 LADV--SAQLLERLWLSWNPAYHLKEAT 214 >gi|311029848|ref|ZP_07707938.1| binding-protein-dependent transport systems inner membrane component [Bacillus sp. m3-13] Length = 251 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+ V + +A II +GIW+ + L + P+ V+ PL + ++ N Sbjct: 61 RLGVGLFLALIIGTLLGIWLAKSKTADETVGTLVLALQSVPSIVWLPL---AIIWFGFNE 117 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + ++ + GT + N+ G + P + + AS+ +G + IILP PY VT Sbjct: 118 TAIIFIVTLGGTL-VMTINMRMGIKSVPPLYIKAASTMGASGVEMFWKIILPASVPYAVT 176 Query: 509 GAITACGGAWNASIVSEVASWG 530 GA A AW A + +E+ S G Sbjct: 177 GARLAWAFAWRALMAAELLSMG 198 >gi|152964408|ref|YP_001360192.1| ABC transporter inner membrane protein [Kineococcus radiotolerans SRS30216] gi|151358925|gb|ABS01928.1| binding-protein-dependent transport systems inner membrane component [Kineococcus radiotolerans SRS30216] Length = 239 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L + V L SR L +L P L +++P L ++ ++ P K Sbjct: 53 RVLIGFACGAVAGLVLGGLTGASRLLHDLLAPTLGAFRAVPSLAWVPLLGLWIGIGEPPK 112 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ + A F ++T+ + +L ++ L EV R++ G F + +P + P Sbjct: 113 IVLVAIGAFFPVYTT--------VASALSHLDPALVEVGRAYGRRGIGLFTEVLLPATAP 164 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 L+ + + ++ W F+VA+E++ Sbjct: 165 ALLSGLRLGLAQSWLFLVAAELL 187 >gi|187923735|ref|YP_001895377.1| binding-protein-dependent transporters inner membrane component [Burkholderia phytofirmans PsJN] gi|187714929|gb|ACD16153.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 280 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 33/178 (18%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475 Q++ PA PLV+ LW + L+ G + I N G + Sbjct: 120 QMVRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFFPIYVNTFHGIRSV 168 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E+A S+ + G+ +R++ILPG P + G A G W IV+E S Sbjct: 169 DANLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 222 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 +G+G + E VV+G+L+ VLA L R WHP Y G + Sbjct: 223 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAKS 280 >gi|121607756|ref|YP_995563.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121552396|gb|ABM56545.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 281 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 35/173 (20%), Positives = 73/173 (42%), Gaps = 24/173 (13%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A+ + +G+ +G + + + P LL P + PL + +WL L Sbjct: 100 VVAATPGVLLGLAMGASRTVEALVNPVFLLLRPIPPLAWIPLAI-----------VWLGL 148 Query: 455 -----LMIFGTQWYI--LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 +M+ ++ + N +G E ++ ITGWR+WR +++PG P Sbjct: 149 GDAAKVMVIFVAAFVPSVINSFSGVRQIDRPLLEASAMLRITGWRYWREVLIPGALPSIF 208 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 TG + +W + +E+ GLG + + + P +++G++ Sbjct: 209 TGLRLSLQASWTTLVAAELVG------AVAGLGQILNQGAQDIHPPMILVGMI 255 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 25/123 (20%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR + ++ P+ +++ IP L ++ +V+ + A + IF + Sbjct: 114 GASRTVEALVNPVFLLLRPIPPLAWIPLAIVWLGL--------GDAAKVMVIFVAAFVPS 165 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + + I R L E S R++GW+ + + +P ++P + + +S+ W +VA+ Sbjct: 166 VINSFSGVRQIDRPLLEASAMLRITGWRYWREVLIPGALPSIFTGLRLSLQASWTTLVAA 225 Query: 211 EMI 213 E++ Sbjct: 226 ELV 228 >gi|116753834|ref|YP_842952.1| binding-protein-dependent transport systems inner membrane component [Methanosaeta thermophila PT] gi|116665285|gb|ABK14312.1| binding-protein-dependent transport systems inner membrane component [Methanosaeta thermophila PT] Length = 239 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 23/177 (12%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR L ++ PI+++++ IP L ++ F +V+F + +A F +F V+ + Sbjct: 68 SRSLDKIIDPIVEVVRPIPPLAWIPFAIVWFGLTHE--------SAGFIVFIGAVFPILI 119 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKF-WYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + Y N+PR E + + + Y+ +P+++P + + ++M W +VA+E Sbjct: 120 NTYVGFRNLPRVYVESAMVLGATRDRDLIRYVALPYALPSIAAGIRIAMGIAWMCLVAAE 179 Query: 212 MIVVGDTVIPLPGIG----SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 M V + G+G SY L E LL ++ +LG++ L+ FR +I Sbjct: 180 MFGVSTS-----GLGYRIWSYYYLHKMEHVLLYMI-----VLGMLGLFIDKAFRSII 226 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 10/143 (6%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 II +P+G+ +G+ + I P +++ P + P + H + ++ Sbjct: 56 IIAMPLGMGMGWSRSLDKIIDPIVEVVRPIPPLAWIPFAIVWFGLTHESAG----FIVFI 111 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFPYYVTGAITACGGA 517 G + IL N G P + E A T R RY+ LP P G A G A Sbjct: 112 GAVFPILINTYVGFRNLPRVYVESAMVLGATRDRDLIRYVALPYALPSIAAGIRIAMGIA 171 Query: 518 WNASIVSEVASWGHIHLRTTGLG 540 W + +E+ + T+GLG Sbjct: 172 WMCLVAAEM-----FGVSTSGLG 189 >gi|297567741|ref|YP_003686712.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Meiothermus silvanus DSM 9946] gi|296852190|gb|ADH65204.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Meiothermus silvanus DSM 9946] Length = 278 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 + IF++ F M Q +P++LEE R LS W +WY+ +P S P LV + Sbjct: 143 LLQIFSATGALAVFLMRQHFITLPKELEEAGRVDGLSHWGVYWYIMLPLSRPALVTVAIF 202 Query: 199 SMSGGW 204 +M W Sbjct: 203 AMLNSW 208 >gi|320184675|gb|EFW59469.1| Taurine transport system permease protein TauC [Shigella flexneri CDC 796-83] Length = 218 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L + PL+V Sbjct: 32 SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGE 91 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 92 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 147 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 148 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 184 >gi|297156427|gb|ADI06139.1| transport system integral membrane protein [Streptomyces bingchenggensis BCW-1] Length = 317 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 14/213 (6%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L +IW ++ R + +IA I P+G+ + I + I P L + P+ + Sbjct: 109 ELLDIIW---TSVSRGLFGFLIALAIATPLGLIVARVKFIRAGIGPILSGLQSLPSVAWV 165 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P V + LN + +++++ G I +++G P F + G Sbjct: 166 P---PAVIWLGLNDKMMYTVILL-GAVPSIANGLVSGIDQVPPLFLRAGRTLGARGLVSA 221 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFP 553 R+I+LP P YV G +W + + +E +A + L GLG Y+ Sbjct: 222 RHILLPAALPGYVAGLKQGWAFSWRSLMAAEIIAKSPDLGL---GLGQYLENQRNNSDMA 278 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 V+LG++++ +A+ ++ P+ R LR Sbjct: 279 GVLLGIIMILFVGIAIELLIFAPIE---RRVLR 308 >gi|227890328|ref|ZP_04008133.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849142|gb|EEJ59228.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 515 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 14/130 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L AMVI++ F+ ++ + I I+Q+IP L L + + + P Sbjct: 31 LLIAMVIAIPLAFILKG----HKKAAEFTLQIAGIIQTIPSLAVLGLLLPFVGIGTVPA- 85 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 VI L AI IF + Y L IP +LEE + + L+ W+K L +P +MP Sbjct: 86 VIALVLYAIMPIFQN--------TYSGLTEIPENLEEAATALGLTKWKKLQRLEIPLAMP 137 Query: 191 GLVWNMMMSM 200 +V + +++ Sbjct: 138 MIVAGIRIAL 147 >gi|325273145|ref|ZP_08139441.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas sp. TJI-51] gi|324101720|gb|EGB99270.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas sp. TJI-51] Length = 281 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++ A V+ + +AA + P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVTFATVVCVAIGVPLGIVAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y +C++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICDVPQELMDAGKAFGCSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPHAMPSIAAGVTQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 ISLGFEAGLAIVLLAIMLDRICKQP 273 >gi|260575920|ref|ZP_05843915.1| choline ABC transporter, permease protein [Rhodobacter sp. SW2] gi|259021846|gb|EEW25147.1| choline ABC transporter, permease protein [Rhodobacter sp. SW2] Length = 312 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + +LSA V+ + AA RL +VP+LD+MQ++P +L +V+ Sbjct: 126 EETTESLTLVLSACVVCMGLGVPIGIAAAHRPRLYAWMVPVLDLMQTLPTFVYLIPAIVF 185 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A + + + + +T + + P+ L E + +F + Q+ W Sbjct: 186 FGIGMVPGLI-----ATVIFVLPAPI-RLT---HLGISTTPQPLLEAATAFGATPRQRLW 236 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P++ P GL +M+S+S Sbjct: 237 KVELPYAFPQIMAGLNQTIMLSLS 260 >gi|304405136|ref|ZP_07386796.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304346015|gb|EFM11849.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 306 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 17/181 (9%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RR +L P L +++ +P L +++F E++ + I T + + + Sbjct: 139 RRAEYLLDPSLQLLRLVPHLAIAPLIILWFGF--------GEVSKVVIIMTGAFFPLYIN 190 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + N+ L EV+R + S + L VP ++P L + +S++ W +V +E+I Sbjct: 191 TFLGIRNVDARLFEVARVLQFSWRTRITKLIVPAALPELFIGLRLSLAVAWIGLVVAELI 250 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270 G T G+G I LA +E D I +L V L D +LL R + W + + Sbjct: 251 --GAT----SGVGFLINLAKQESDTSTIFVGILIFAIVGKLIDSLVRLLERKWLFWRDSY 304 Query: 271 R 271 + Sbjct: 305 Q 305 >gi|209883285|ref|YP_002287142.1| putative aliphatic sulfonates transport permease protein SsuC [Oligotropha carboxidovorans OM5] gi|209871481|gb|ACI91277.1| putative aliphatic sulfonates transport permease protein SsuC [Oligotropha carboxidovorans OM5] Length = 281 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 15/205 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T+ R+ + + +LF V + S +L P L +++IP + ++ +++ Sbjct: 83 TSWRVGAGFGLGVLFGTVLGAVCGYSALARRLLDPTLQALRAIPSIAWVPLFILWLGIFE 142 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 KV + F I+ + ++ + R + EV R+FRLSG + +P Sbjct: 143 MSKVALIAVGVFFPIY--------LGLMGAVLGVDRKIVEVGRTFRLSGPAMIRRILLPA 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA--ILYAM 245 +P V ++ + GW FVVA+E++ + + L G + K ++LA I++A+ Sbjct: 195 VLPSYVVSLRSGLGLGWMFVVAAELMGASEGLGYLLIDGQQLG---KPAEILAAIIVFAL 251 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKF 270 L + Q+ F P++ W + F Sbjct: 252 LGKFTDWLI--QVGFAPLLRWQDAF 274 >gi|78356108|ref|YP_387557.1| phosphate ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218513|gb|ABB37862.1| phosphate ABC transporter membrane protein 1, PhoT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 298 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%) Query: 57 DVHSLPQYASRTTLRMLSAMV-ISL-LFTFVYATLAAKSRRLGMVLVPILDIMQSIP--I 112 D LP A + LS+++ I L L T VY + A S R+ V+ P+++++Q++P + Sbjct: 65 DFGILPMIAGSLAVTGLSSVIAIPLGLMTAVYLSEIA-SPRMRSVVKPLVEMLQALPSVV 123 Query: 113 LGFLTFTVVY-FMNLYPGKVIGAEL--AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169 +GF VV F+ G G L AAI F + V +T ++ ++P +L E S Sbjct: 124 IGFFGMVVVAPFLQQTFGLATGLNLTNAAIMLAFMA-VPTITSISEDAIYSVPNELREAS 182 Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---------DTVI 220 + + WQ + +P S+PG+ +++ MS + M+ G D V Sbjct: 183 LALGATRWQTISRVVLPASLPGISTAVILGMSRSIGETMVVLMVAGGAAMIPGSLFDPVR 242 Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 P+P + IA + E + Y L G++ L+F + W Sbjct: 243 PMP---ASIAAEMAEAPFKSDHYHALFATGMVLFIFTLMFNILAAW 285 >gi|313638506|gb|EFS03676.1| glycine betaine transport system permease protein opuAB [Listeria seeligeri FSL S4-171] Length = 282 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALIIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|294627378|ref|ZP_06705963.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598333|gb|EFF42485.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 489 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 16/174 (9%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 + L +IPR+L + + + L W + W + +P + +V + + V+ Sbjct: 374 HAGLSSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAA------VINVGTAT 427 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 +G +I G G I +I+ DL IL + V+ L Q LF + W+ Sbjct: 428 LG-ALIGAGGYGQPILTSIRLDDLGLILEGAIPA-AVLALLVQALFEGVERWAT 479 >gi|262198632|ref|YP_003269841.1| binding-protein-dependent transporters inner membrane component [Haliangium ochraceum DSM 14365] gi|262081979|gb|ACY17948.1| binding-protein-dependent transport systems inner membrane component [Haliangium ochraceum DSM 14365] Length = 281 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 18/150 (12%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++++VI+LL + A+KS V+ P+LD MQ++P +L V++F G+V Sbjct: 94 VIASVVIALLISVPIGIWASKSDTAAHVVRPVLDFMQTLPAFVYLIPAVLFFQL---GEV 150 Query: 132 IGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G IFA+ + ++ N+ + +P+D++E + SF + Q + +P +MP Sbjct: 151 PGVIATLIFAMPPAVRLTNL------GIRQVPKDIKEAAVSFGSTPSQMLFKAELPVAMP 204 Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVG 216 G+ +M+++S VV + MI G Sbjct: 205 TILAGVNQTIMLALS----MVVITGMIGAG 230 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 9/156 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 IAW+ G + FT +L + +G T+ V+ ++IA +I +P+GIW Sbjct: 58 IAWRMSGIGMGIFTLLGMLLIDSMGLWAPTMDTLALVIASVVIALLISVPIGIWASKSDT 117 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + ++P + PA V+ + V ++ L + +IF + + G Sbjct: 118 AAHVVRPVLDFMQTLPAFVYL---IPAVLFFQLGEVPGVIATLIFAMPPAVRLTNL-GIR 173 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 P D KE A SF T + LP P + G Sbjct: 174 QVPKDIKEAAVSFGSTPSQMLFKAELPVAMPTILAG 209 >gi|222086307|ref|YP_002544840.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723755|gb|ACM26911.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 303 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 18/170 (10%) Query: 69 TLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TL M++ +I+++ L A+S RL ++ P LD+MQ++P +L V+ F Sbjct: 111 TLAMVTVCTLIAIVIGLPIGILMARSDRLQSIINPTLDVMQTMPTFVYLLPVVMIF---G 167 Query: 128 PGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV G I+A+ ++ N+ + + +++ E + +F S QK + + +P Sbjct: 168 IGKVPGLIAVVIYAVPPIIRLTNLGIRL------VDKEVLEAADAFGSSHRQKLFNVQIP 221 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++P ++ + ++ VV + M+ VG G+G AI Q Sbjct: 222 LALPTIMAGINQTIMMALAMVVVASMVGVG-------GLGKNTLQAINNQ 264 >gi|322368074|ref|ZP_08042643.1| binding-protein-dependent transport systems inner membrane component [Haladaptatus paucihalophilus DX253] gi|320552090|gb|EFW93735.1| binding-protein-dependent transport systems inner membrane component [Haladaptatus paucihalophilus DX253] Length = 280 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 46/221 (20%), Positives = 91/221 (41%), Gaps = 16/221 (7%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G + TT ++ +V + +++ ++T+L ++ +VI L SRR+ Sbjct: 61 GAEFTTSAPFVLPVVGVPVELPRALTRLAQTSLHLVPGLVIGAFVGNAVGLLVGYSRRID 120 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 + P + +++ IP L ++ F +V+F + G A F + +W + Y Sbjct: 121 ATVTPAIRVLRPIPELAWIAFAIVWFGIGHAG--------AAFIVAIGALWINYYGAYSG 172 Query: 158 LCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + + +EV+ S + + ++ +P + P +V S+ MIVVG Sbjct: 173 VHGVRDGYKEVATSLGVRTHLGMLRHVVLPAASPSMVNGFRTSIG-------RCLMIVVG 225 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + PG+G I A D+ + ML + V D Sbjct: 226 AELFGAPGVGYEIINASNNLDMARSMAYMLLISAVYICVDS 266 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 5/131 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T +V ++I + + VG+ +G+ I + + P ++L P + + H Sbjct: 91 TSLHLVPGLVIGAFVGNAVGLLVGYSRRIDATVTPAIRVLRPIPELAWIAFAIVWFGIGH 150 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFP 504 + ++ G W + +G + +KEVA+S + T R+++LP P Sbjct: 151 AG----AAFIVAIGALWINYYGAYSGVHGVRDGYKEVATSLGVRTHLGMLRHVVLPAASP 206 Query: 505 YYVTGAITACG 515 V G T+ G Sbjct: 207 SMVNGFRTSIG 217 >gi|238792918|ref|ZP_04636548.1| Taurine ABC transporter, permease protein [Yersinia intermedia ATCC 29909] gi|238727772|gb|EEQ19296.1| Taurine ABC transporter, permease protein [Yersinia intermedia ATCC 29909] Length = 280 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 119 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLAAVAGV 170 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 171 RSVAQVRVRAARALGASHWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 225 >gi|90410103|ref|ZP_01218120.1| putative permease of ABC transporter [Photobacterium profundum 3TCK] gi|90329456|gb|EAS45713.1| putative permease of ABC transporter [Photobacterium profundum 3TCK] Length = 282 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 17/197 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 T + +LSA + S++ AA L ++ PILD+MQ+IP +L T+V F + Sbjct: 95 ETFVLVLSATMFSVIVGVPIGIAAAHKPWLYTIMRPILDLMQTIPTFVYLIPTLVLFGLG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG + IFAI + +T Y + +P +L E R+F S + + + + Sbjct: 155 VVPGLIS----TIIFAI--AAPIRLT---YLGISRVPEELVEAGRAFGASRMKLLFKVEL 205 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +MP + M+G ++ S +VV ++ G+G + A+ ++ A Sbjct: 206 PAAMPNI-------MAGITQCIMLSLSMVVISALVGADGLGKPVVRALNTVNISQGFEAG 258 Query: 246 LTMLGVIFLYDQLLFRP 262 L ++ V + D+L P Sbjct: 259 LAIVLVAIILDRLCKTP 275 >gi|311112824|ref|YP_003984046.1| nitrate/sulfonate/bicarbonate ABC transporter membrane protein [Rothia dentocariosa ATCC 17931] gi|310944318|gb|ADP40612.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Rothia dentocariosa ATCC 17931] Length = 317 Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 8/146 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L +I + V L S +V P + ++++P L ++ +++ Sbjct: 126 STQRVLLGFLIGAVLGLVLGALIGISVPARLVAAPTIGALRAVPSLAWVPLLLLWVGIGE 185 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 KV + A F ++T+ + +L ++ L E +R+F L G + F + +P Sbjct: 186 NSKVTLVAIGAFFPVYTT--------VSAALAHVDVKLVEAARAFGLKGIRLFTTVQLPA 237 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213 +P +V + ++++ W F+VA+E++ Sbjct: 238 VLPSVVSGLRLALAQAWLFLVAAELL 263 >gi|290476212|ref|YP_003469112.1| glycine/betaine/proline ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289175545|emb|CBJ82348.1| glycine/betaine/proline transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 364 Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 17/165 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A + R+ ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 166 AHNERVARIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVMVTIIFAL--PPIVRL 220 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T + +P DL E ++SF S Q + + +P +MP ++ + ++ VV + Sbjct: 221 TI---LGIKQVPADLIEAAQSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIA 277 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQD--LLAILYAMLTMLGVIF 253 MI VG G+G + I D L A+ A + +L +I Sbjct: 278 SMIAVG-------GLGQMVLRGIGRLDIGLAAVGGAGIVILAIIL 315 >gi|170758692|ref|YP_001788569.1| ABC transporter, permease protein [Clostridium botulinum A3 str. Loch Maree] gi|169405681|gb|ACA54092.1| ABC transporter, permease protein [Clostridium botulinum A3 str. Loch Maree] Length = 180 Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 4/134 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT+ RV+ + A II +P+G+++G ++ I F + P + PL + Sbjct: 47 ITLNRVLKGFMYAMIIGVPLGLFMGAFKMANNLIGGFIDSIRQVPIMAWVPLTIVWFGIG 106 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P ++L + F + ++ N IAG D+ A S W + IILP P Sbjct: 107 D-GPTIFL---IAFSGIFPVILNTIAGVKNISKDYYNAARSMGAGPWSIFSNIILPASIP 162 Query: 505 YYVTGAITACGGAW 518 +TGA A G W Sbjct: 163 DILTGARIAISGGW 176 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +D ++ +PI+ ++ T+V+F IG + IF I S ++ + + + NI + Sbjct: 84 IDSIRQVPIMAWVPLTIVWFG-------IG-DGPTIFLIAFSGIFPVILNTIAGVKNISK 135 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 D +RS W F + +P S+P ++ +++SGGW V+ Sbjct: 136 DYYNAARSMGAGPWSIFSNIILPASIPDILTGARIAISGGWMSVI 180 >gi|325284546|ref|YP_004257085.1| ABC-type transporter, integral membrane subunit [Deinococcus proteolyticus MRP] gi|324316720|gb|ADY27831.1| ABC-type transporter, integral membrane subunit [Deinococcus proteolyticus MRP] Length = 264 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 10/178 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+V + +A +I P+G+ +G + +P QLL + PL V + Sbjct: 75 VSLKRVMVGLGLAFVIGAPLGLLVGSSRLLERATEPAFQLLRMISPLSWMPLAVMVLGVG 134 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + LL+ W ILF G + ++ S T + +I LPGI Sbjct: 135 DAP----IYLLLALAGLWPILFAAAGGVKNLNASWLDLGRSLSATRGEMFWHITLPGILG 190 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + G A G W + E+ + +R GLG +I ++ ++ ++PE++ V+++ Sbjct: 191 SLLQGVRLAIGTLWILLVPCEM-----LGVR-AGLGYFILDTRDRLAYPELMATVVLI 242 >gi|170693842|ref|ZP_02884999.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gi|170141260|gb|EDT09431.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 287 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 19/208 (9%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R +I + + +G+ +GF P + + Q++ A P PLV+ Sbjct: 89 VSLLRAAGGFVIGGTLGLALGVIVGFSPLAQALLDRSVQMVRAVPFLAMLPLVIVWFGVG 148 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++L ++F I N + G E+ + R IILPG P Sbjct: 149 EVAKIFLVALAVLF----PIYINTMLGIRQIDPKLMELGRVVGLERAAIVRRIILPGAMP 204 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL------- 557 +TG A AW A +++E + T G+G ++ E + ++L Sbjct: 205 SILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLNTNVIILTMIIYAI 258 Query: 558 -GVLIMCCFVLALNRFL-WHPLYLYGTR 583 GV+ L RFL WH Y G R Sbjct: 259 IGVVADALVRLLEGRFLSWHANYTKGAR 286 >gi|281355624|ref|ZP_06242118.1| binding-protein-dependent transport systems inner membrane component [Victivallis vadensis ATCC BAA-548] gi|281318504|gb|EFB02524.1| binding-protein-dependent transport systems inner membrane component [Victivallis vadensis ATCC BAA-548] Length = 352 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 10/172 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+GI G P +P + + FPA VF L V+ + P + + ++ F Q Sbjct: 144 VPLGILCGAFPFFERLFEPVVEFIRYFPAPVFATLAVAILGIND-APKVAIIVIGTFFQQ 202 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 ++ N A E A + R +++P + P G AW Sbjct: 203 LPMIANTTRQADP---ALIEAAQTLGAGRKRILMRVVIPSVLPKLYKDMRILLGWAWTYL 259 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 IV+EV TTG+ +I + + +F V ++I+ C LA + FL Sbjct: 260 IVAEVVG------TTTGISWFITQQAKYRNFANVYAAIVIIGCIGLACDMFL 305 >gi|116051468|ref|YP_789699.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|296388035|ref|ZP_06877510.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|313108805|ref|ZP_07794791.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|115586689|gb|ABJ12704.1| putative aliphatic sulfonates ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|310881293|gb|EFQ39887.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 274 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV I S + + VG W+G + ++P Q L A P+ + PL++ Sbjct: 77 SLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDE 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + +L+ G + + ++AG + E+ + ++ + R I+LP P Sbjct: 137 -TPKI---VLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPN 192 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A +W + +E+ + T GLG +++ E S P++V+ +++ Sbjct: 193 LFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET-SRPDLVIAAILVLAA 245 Query: 566 VLALNRFLWHPLYLYGTRCLR 586 + L+ L L R LR Sbjct: 246 LGKLSDGLLRSLE---RRALR 263 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 17/206 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + I T SRR L P +++IP L ++ +++F K Sbjct: 80 RVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPK 139 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ L A F ++ ++ + + R E+ R +RLS + + +P ++P Sbjct: 140 IVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALP 191 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 L + ++S W F+VA+E+I G+G ++ + ++ A+L + Sbjct: 192 NLFTGLRGALSLSWMFLVAAELIAATQ------GLGYLLSDGRETSRPDLVIAAILVLAA 245 Query: 251 VIFLYDQLLF---RPMIVWSNKFRLE 273 + L D LL R + W + F E Sbjct: 246 LGKLSDGLLRSLERRALRWRDSFDGE 271 >gi|313836838|gb|EFS74552.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA2] gi|314929750|gb|EFS93581.1| ABC transporter, permease protein [Propionibacterium acnes HL044PA1] gi|314972183|gb|EFT16280.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA3] gi|328907608|gb|EGG27372.1| glycine betaine transport system permease protein [Propionibacterium sp. P08] Length = 288 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPIL 113 V ++ Q+ T++ L+ +V++++ + A AAKS+R ++ PILD MQ++P L Sbjct: 84 VRAMDQW--NNTMQTLALVVVAVILALIVAIPLGIWAAKSKRFSAIIKPILDFMQTMPSL 141 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L +V F G+V GA IFA+ + F+ + + + E +F Sbjct: 142 AYLVPVIVLF---GIGQVPGAIATIIFALPP----GVRFTEL-GIRGVDAETVEAGAAFG 193 Query: 174 LSGWQKFWYLGVPFSMP 190 S W + +P +MP Sbjct: 194 ASPRHILWRIQMPLAMP 210 >gi|310822864|ref|YP_003955222.1| phosphate ABC transporter permease pstc [Stigmatella aurantiaca DW4/3-1] gi|309395936|gb|ADO73395.1| Phosphate ABC transporter, permease protein PstC [Stigmatella aurantiaca DW4/3-1] Length = 336 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 42/210 (20%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFL-----------TFTVVYFMNLYPGKVIGAELAAIF 140 RRL L PI++++ IP +LGF TF Y +N +G LA + Sbjct: 140 RRLREFLKPIIELLAGIPSVVLGFFALMVLATLLQDTFGFTYRLNAVVAG-LGLALAIVP 198 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV------- 193 IFT +L +PR E S + + W+ W + +P + PG++ Sbjct: 199 VIFTVA--------EDALTAVPRSYREASLALGATPWETAWKVVLPAAAPGILAACVLGF 250 Query: 194 -----WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 M++ M+ G +V+S + GD+V L + IA + E + + Y++L Sbjct: 251 GRAIGETMIILMASGNAAIVSSSL---GDSVRSL---SATIAAEMGEVVVGSPHYSLLFF 304 Query: 249 LGV-IFLYDQLLFRPMIVWSNKFRLERTTG 277 +GV +F++ +L VW+ K L+R TG Sbjct: 305 IGVELFVFTFVLNMVASVWTKKV-LKRLTG 333 >gi|240140554|ref|YP_002965034.1| glycine/betaine/proline transporter, membrane component of ABC transporter [Methylobacterium extorquens AM1] gi|254563044|ref|YP_003070139.1| glycine/betaine/proline ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|240010531|gb|ACS41757.1| glycine/betaine/proline transporter, membrane component of ABC transporter [Methylobacterium extorquens AM1] gi|254270322|emb|CAX26318.1| glycine/betaine/proline transporter, membrane component of ABC transporter [Methylobacterium extorquens DM4] Length = 283 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A SRR PILD+MQ++P + VY + P +GA ++A FA V + Sbjct: 117 ALSRRAWRTFSPILDMMQTLP-------SFVYLIPALPFFGLGA-VSACFATIVFSVPPV 168 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + N+P +L E S +F S QK + + +P ++P G+ MM+++S Sbjct: 169 IRLTALGIRNVPSELVEASDAFGSSATQKLFKVQLPLALPTIMAGVNQTMMLALS----M 224 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + +I+ + A A + ++ V + D++ Sbjct: 225 VVIAAMIGAG-------GLGRAVWQSIQRLEAGAGFEAGIGIVIVAVILDRV 269 >gi|157146368|ref|YP_001453687.1| alkanesulfonate transporter permease subunit [Citrobacter koseri ATCC BAA-895] gi|157083573|gb|ABV13251.1| hypothetical protein CKO_02127 [Citrobacter koseri ATCC BAA-895] Length = 263 Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 87/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 VQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLVEMARSYGLSGFPLFVHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANA 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + QLL R + W+ + + T Sbjct: 207 GIG-YLAMNAREFLQTDIVVVAIILYALLGKLADV--SAQLLERVWLRWNPAYYTKEAT 262 >gi|299533368|ref|ZP_07046750.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni S44] gi|298718574|gb|EFI59549.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni S44] Length = 257 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ I+ASI+ +P+GI +G + + +PF PA+ F PL++ Sbjct: 66 MTVWRVMGGFILASIVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVG 125 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+IF G+ + I V D E A + + + +++PG Sbjct: 126 EAQ-----KLLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGIVKRVLIPGAA 180 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 181 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 217 >gi|16803055|ref|NP_464540.1| hypothetical protein lmo1015 [Listeria monocytogenes EGD-e] gi|47093961|ref|ZP_00231696.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|47096347|ref|ZP_00233943.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|217964885|ref|YP_002350563.1| glycine betaine transport system permease opuAB [Listeria monocytogenes HCC23] gi|224500739|ref|ZP_03669088.1| glycine betaine transport system permease protein opuAB [Listeria monocytogenes Finland 1988] gi|224502670|ref|ZP_03670977.1| glycine betaine transport system permease protein opuAB [Listeria monocytogenes FSL R2-561] gi|226223633|ref|YP_002757740.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes Clip81459] gi|254827960|ref|ZP_05232647.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes FSL N3-165] gi|254832238|ref|ZP_05236893.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes 10403S] gi|254898811|ref|ZP_05258735.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes J0161] gi|254911700|ref|ZP_05261712.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes J2818] gi|254936026|ref|ZP_05267723.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes F6900] gi|254992281|ref|ZP_05274471.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes FSL J2-064] gi|284801347|ref|YP_003413212.1| hypothetical protein LM5578_1097 [Listeria monocytogenes 08-5578] gi|284994489|ref|YP_003416257.1| hypothetical protein LM5923_1051 [Listeria monocytogenes 08-5923] gi|290893835|ref|ZP_06556814.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes FSL J2-071] gi|4760364|gb|AAD29105.1|AF039835_2 putative glycine betaine membrane transport protein GbuB [Listeria monocytogenes] gi|16410417|emb|CAC99093.1| gbuB [Listeria monocytogenes EGD-e] gi|47015305|gb|EAL06242.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|47017660|gb|EAL08458.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|217334155|gb|ACK39949.1| glycine betaine transport system permease protein opuAB [Listeria monocytogenes HCC23] gi|225876095|emb|CAS04801.1| Putative glycine betaine ABC transporter (permease) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600342|gb|EEW13667.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes FSL N3-165] gi|258608614|gb|EEW21222.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes F6900] gi|284056909|gb|ADB67850.1| hypothetical protein LM5578_1097 [Listeria monocytogenes 08-5578] gi|284059956|gb|ADB70895.1| hypothetical protein LM5923_1051 [Listeria monocytogenes 08-5923] gi|290556662|gb|EFD90197.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes FSL J2-071] gi|293589649|gb|EFF97983.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes J2818] gi|307570556|emb|CAR83735.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes L99] gi|313609549|gb|EFR85092.1| glycine betaine transport system permease protein opuAB [Listeria monocytogenes FSL F2-208] gi|328466908|gb|EGF38017.1| hypothetical protein LM1816_14577 [Listeria monocytogenes 1816] Length = 282 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVV----ASVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|333023182|ref|ZP_08451246.1| putative nitrate ABC transporter, permease [Streptomyces sp. Tu6071] gi|332743034|gb|EGJ73475.1| putative nitrate ABC transporter, permease [Streptomyces sp. Tu6071] Length = 235 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 37/189 (19%), Positives = 81/189 (42%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ ++ ++ +PVG +G+ P + + ++P+ Q A P PL + + Sbjct: 44 SLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGE 103 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P +++ L F T L V A N + + + + + +++P P Sbjct: 104 -TPKVFVIFLASFLATVVAALEGVTATDRTLINAARVLGAPDRVI----FLKVVIPASTP 158 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + + GA G +W + +E+ + GLG + + P + +G+L + Sbjct: 159 FLLVGARIGLGSSWATLVAAELIA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGV 212 Query: 565 FVLALNRFL 573 L ++R L Sbjct: 213 VGLVMDRLL 221 >gi|319796476|ref|YP_004158116.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315598939|gb|ADU40005.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 293 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 14/131 (10%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N + G + ++ +++ + + W+ +RY++ P PY++ G A G + ++V Sbjct: 166 ILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVV 225 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFVLALNRFL-- 573 +E + + TGL + I ES+ + P + +LG++I F AL+R + Sbjct: 226 AEFTA--GTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFIVFA-ALSRMVLG 282 Query: 574 -WHPLYLYGTR 583 WH + R Sbjct: 283 HWHESEMRRER 293 >gi|294667621|ref|ZP_06732835.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602616|gb|EFF46053.1| ABC transporter amino acid permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 489 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 16/174 (9%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 + L +IPR+L + + + L W + W + +P + +V + + V+ Sbjct: 374 HAGLSSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAA------VINVGTAT 427 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 +G +I G G I I+ DL IL + V+ L Q LF + W+ Sbjct: 428 LG-ALIGAGGYGQPILTGIRLDDLGLILEGAIPA-AVLALLVQALFEGVERWAT 479 >gi|59711393|ref|YP_204169.1| glycine betaine transporter subunit [Vibrio fischeri ES114] gi|59479494|gb|AAW85281.1| glycine betaine transporter subunit [Vibrio fischeri ES114] Length = 360 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+SR + PILD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 165 ARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 219 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P DL E SF + Q + + +P ++P G+ +M+S+S Sbjct: 220 TILGIQ---QVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 272 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 273 VVIASMIAVG-------GLGQMVLRGIGRLDM 297 >gi|296876746|ref|ZP_06900794.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus parasanguinis ATCC 15912] gi|296432248|gb|EFH18047.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus parasanguinis ATCC 15912] Length = 303 Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 5/126 (3%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L P ++++ IP + GF+ VV + +L+ G G L+ +F +F + +TF Sbjct: 116 LQPAIELLVGIPSVVYGFIGLQVVVPFTRSLFGGTGFGI-LSGVFVLFVMILPTVTFMTT 174 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 SL +PR E S + + WQ W++ + + G+ ++ M+ + +A +M+V Sbjct: 175 DSLRAVPRHYREASMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVG 234 Query: 216 GDTVIP 221 V+P Sbjct: 235 NSAVVP 240 >gi|46580703|ref|YP_011511.1| glycine/betaine/L-proline ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120602005|ref|YP_966405.1| glycine/betaine ABC transporter permease [Desulfovibrio vulgaris DP4] gi|46450122|gb|AAS96771.1| glycine/betaine/L-proline ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562234|gb|ABM27978.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris DP4] gi|311234422|gb|ADP87276.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris RCH1] Length = 283 Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 80/164 (48%), Gaps = 21/164 (12%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY--- 155 VL+P+LD+MQ++P +L + +F L + A+F + V+ M ++ Sbjct: 127 VLMPVLDLMQTMPAFVYLIPAIPFF-----------GLGKVAAVFATVVFAMPPAIRFTC 175 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P DL E + +F S WQ+ L +P + P ++ + ++ ++A M+V+ Sbjct: 176 LGIRQVPDDLVECAEAFGTSRWQRLVKLELPLAAPTILAGVNQTI------MLALSMVVI 229 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +I G+G + AI+ +L + A + ++ V D++L Sbjct: 230 A-AMIGARGLGGEVWKAIQRLELGSGFEAGIGIVIVAICLDRVL 272 >gi|171316855|ref|ZP_02906065.1| choline ABC transporter, permease protein [Burkholderia ambifaria MEX-5] gi|171098025|gb|EDT42842.1| choline ABC transporter, permease protein [Burkholderia ambifaria MEX-5] Length = 298 Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGVWAAKSKLVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|161524842|ref|YP_001579854.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189350408|ref|YP_001946036.1| sulfonate/nitrate/taurine transporter permease [Burkholderia multivorans ATCC 17616] gi|160342271|gb|ABX15357.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189334430|dbj|BAG43500.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 273 Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + E+ Sbjct: 113 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDASLIEM 168 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R++ILPG P + G A G W IV+E S +G+G Sbjct: 169 AKSYGVRGFALYRHVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 222 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G + Sbjct: 223 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGAKA 273 >gi|91772543|ref|YP_565235.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Methanococcoides burtonii DSM 6242] gi|91711558|gb|ABE51485.1| Glycine betaine ABC transporter permease protein [Methanococcoides burtonii DSM 6242] Length = 276 Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 70/140 (50%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 T ++++ ++LL ++AK+ ++ P+LD+MQ++P +L V++F + Sbjct: 93 ETISLVITSASLALLIAIPLGIVSAKNEFAYHIIKPLLDLMQTMPSFVYLIPAVIFFGLG 152 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 PG V A I + T + Q +P++L EV+ +F + WQK + + Sbjct: 153 NVPGLV-----ATIVFAMPPAIRLTTLGIQQ----VPKELTEVADAFGSTPWQKLTKVEL 203 Query: 186 PFSMP----GLVWNMMMSMS 201 P ++P G+ +M+S+S Sbjct: 204 PTALPSIMAGVNQCIMLSLS 223 >gi|318058231|ref|ZP_07976954.1| binding-protein-dependent transporter inner membrane component [Streptomyces sp. SA3_actG] Length = 271 Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust. Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 16/191 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ ++ ++ +PVG +G+ P + + ++P+ Q A P PL + + Sbjct: 80 SLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGE 139 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIA---GASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 P +++ L F L V+A G +A + A + +++P Sbjct: 140 -TPKVFVIFLASF------LATVVAALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPAS 192 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P+ + GA G +W + +E+ + GLG + + P + +G+L + Sbjct: 193 TPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIFVGLLTI 246 Query: 563 CCFVLALNRFL 573 L ++R L Sbjct: 247 GVVGLVMDRLL 257 >gi|312116288|ref|YP_004013884.1| binding-protein-dependent transporters inner membrane component [Rhodomicrobium vannielii ATCC 17100] gi|311221417|gb|ADP72785.1| binding-protein-dependent transport systems inner membrane component [Rhodomicrobium vannielii ATCC 17100] Length = 289 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 19/214 (8%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW + IVN DV W ++ R ++A ++ +P+G+ +G Sbjct: 76 AW--VDLIVNGSLLSDV----W---ASLRRSATGFLLAVLVAVPLGLLMGSYRKFERLTD 126 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 F Q L P PL V + + + + + W +L N I+G + Sbjct: 127 LFVQTLRNTPQYALLPLFVLTMGIGEASK----IAITFYASMWMLLINTISGVKSVDPTL 182 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + A S + +R ++LP P GA A AS+VS + + + +G+ Sbjct: 183 IKAARSMGANDFDLFRNVVLPASVPSITAGARLAV----KASVVSVIGA--EMLAAQSGV 236 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G I + PE+ G+L + +N L Sbjct: 237 GHLIQNAQLMMQVPEMYAGILTLTVIGTTINYLL 270 >gi|28377606|ref|NP_784498.1| phosphate ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254555784|ref|YP_003062201.1| phosphate ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|308179759|ref|YP_003923887.1| phosphate ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270439|emb|CAD63341.1| phosphate ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254044711|gb|ACT61504.1| phosphate ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|308045250|gb|ADN97793.1| phosphate ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 309 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 8/170 (4%) Query: 58 VHSLPQYASRTTLRMLSAMVIS--LLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--IL 113 V +LP + +LSA++ + + T V+ T RR +L P+ +++ IP + Sbjct: 80 VGALPMIVGSFLITILSALIATPFAIGTAVFMT-EISPRRGAKILRPVTELLVGIPSVVY 138 Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 GF+ VV + N + G G L+ F +F + +T +L ++PR E S + Sbjct: 139 GFIGLQVVVPFVRNTFGGSGYGI-LSGTFVLFVMILPTVTSMTADALNSVPRYYREASLA 197 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ + + + ++PG++ ++ M+ + +A +M++ T++P Sbjct: 198 LGATRWQTIYKVVLRAAIPGMLTAVVFGMARAFGEALAVQMVIGNATLLP 247 >gi|312867635|ref|ZP_07727841.1| phosphate ABC transporter, permease protein PstC [Streptococcus parasanguinis F0405] gi|322389237|ref|ZP_08062798.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus parasanguinis ATCC 903] gi|311096698|gb|EFQ54936.1| phosphate ABC transporter, permease protein PstC [Streptococcus parasanguinis F0405] gi|321144142|gb|EFX39559.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus parasanguinis ATCC 903] Length = 303 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 5/126 (3%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L P ++++ IP + GF+ VV + +L+ G G L+ +F +F + +TF Sbjct: 116 LQPAIELLVGIPSVVYGFIGLQVVVPFTRSLFGGTGFGI-LSGVFVLFVMILPTVTFMTT 174 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 SL +PR E S + + WQ W++ + + G+ ++ M+ + +A +M+V Sbjct: 175 DSLRAVPRHYREASMAMGATRWQTIWHVTLKAARSGIFTAVVFGMARAFGEALAIQMVVG 234 Query: 216 GDTVIP 221 V+P Sbjct: 235 NSAVVP 240 >gi|283853315|ref|ZP_06370564.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. FW1012B] gi|283571296|gb|EFC19307.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. FW1012B] Length = 251 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 18/151 (11%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+V +A ++ PVG+ +G P + P + P + PL + Sbjct: 60 MSLTRVLVGTGLAVVLGAPVGLALGASPRLRGGFMPLVDFIRPIPPLAWVPLAI------ 113 Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LWL L L+ G + ++ +G A + E WR + Sbjct: 114 -----LWLGLGLASAAALIFLGAFFPVVLATCSGVRAVDRSYVEAVRILGGGRLAVWRKV 168 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 +LPG P +TG G W + +E A Sbjct: 169 LLPGCLPAALTGVRVGLGIGWMTLVAAEFAG 199 >gi|85059883|ref|YP_455585.1| glycine betaine transporter membrane protein [Sodalis glossinidius str. 'morsitans'] gi|84780403|dbj|BAE75180.1| glycine betaine/L-proline ABC transporter permease component [Sodalis glossinidius str. 'morsitans'] Length = 349 Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 164 ARSVRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 218 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P ++P G+ +M+++S Sbjct: 219 TI---LGIKQVPADLVEAAESFGTSPSQMLFKVQLPLALPTIMAGINQTLMLALS----M 271 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 272 VVIASMIAVG-------GLGQMVLRGIGRLDM 296 >gi|315222700|ref|ZP_07864589.1| phosphate ABC transporter, permease protein PstC [Streptococcus anginosus F0211] gi|319938947|ref|ZP_08013311.1| phosphate ABC transporter [Streptococcus anginosus 1_2_62CV] gi|315188386|gb|EFU22112.1| phosphate ABC transporter, permease protein PstC [Streptococcus anginosus F0211] gi|319811997|gb|EFW08263.1| phosphate ABC transporter [Streptococcus anginosus 1_2_62CV] Length = 303 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ VV + +++ G G L+ IF +F + +TF Sbjct: 115 ILQPAIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILPTVTFMT 173 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + G+ ++ M+ + +A +M+V Sbjct: 174 TDSLRAVPRHYREASMAMGATRWQTIWRVTLKAARSGIFTAIVFGMARAFGEALAIQMVV 233 Query: 215 VGDTVIP 221 VIP Sbjct: 234 GNSAVIP 240 >gi|330810502|ref|YP_004354964.1| glycine betaine ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378610|gb|AEA69960.1| Glycine betaine ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 282 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 17/203 (8%) Query: 57 DVHSL-PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 DV L P+ S L +L+A V++L+ LA + + ++ P+LD++Q++P + Sbjct: 83 DVMGLWPETVSTLAL-VLTATVLALVVAIPLGVLAGLAPSVDRIVDPVLDLIQTMPPYIY 141 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L + + P A+ A F V + PR+ E+ + ++ Sbjct: 142 L-LPAIALLGYGPAT-------ALLATFIVAVPPAIRLTSLGIRMTPREFIELGEASGVT 193 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 GWQ F + +PF+ P ++ + S+ + VV + ++ G G+G I AI+ Sbjct: 194 GWQMFLKIRLPFAKPSIMAGVNQSLMMAFGMVVIAGIVGSG-------GLGESIYGAIRT 246 Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258 D+ + A + ++ + + D+L Sbjct: 247 LDIAKSINAAMAIVILTMILDRL 269 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 4/124 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V+ ++A ++ IP+G+ G P + + P L+ P ++ ++ + Y Sbjct: 94 TLALVLTATVLALVVAIPLGVLAGLAPSVDRIVDPVLDLIQTMPPYIYLLPAIALLGY-- 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P L I I + G P +F E+ + +TGW+ + I LP P Sbjct: 152 -GPATALLATFIVAVPPAIRLTSL-GIRMTPREFIELGEASGVTGWQMFLKIRLPFAKPS 209 Query: 506 YVTG 509 + G Sbjct: 210 IMAG 213 >gi|315281743|ref|ZP_07870304.1| glycine betaine transport system permease protein opuAB [Listeria marthii FSL S4-120] gi|313614611|gb|EFR88194.1| glycine betaine transport system permease protein opuAB [Listeria marthii FSL S4-120] Length = 282 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|261821115|ref|YP_003259221.1| binding-protein-dependent transporters inner membrane component [Pectobacterium wasabiae WPP163] gi|261605128|gb|ACX87614.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium wasabiae WPP163] Length = 533 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 17/162 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA-IFTSQVWN 149 SRR +L P + ++ IP LG++ +V F G + A A I + + Sbjct: 105 GASRRAEHLLHPTVYMLAQIPTLGWIPLFMVLF---------GIDDALKLAVIIKAVIIP 155 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T + N+P L+EV+R+ RL Q+ L +P + P + + +S+S W ++ Sbjct: 156 VTLHTQTGVRNVPPALQEVARTLRLPWHQRLIKLTLPAAFPTWLTGLRLSLSQAWVSLIV 215 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 E++ GIG Y+ + ++ L I++ +T++G+ Sbjct: 216 VELLASSQ------GIG-YLLVWGRQLFQLDIVFVCITIIGL 250 >gi|257056604|ref|YP_003134436.1| ABC-type proline/glycine betaine transport system, permease component [Saccharomonospora viridis DSM 43017] gi|256586476|gb|ACU97609.1| ABC-type proline/glycine betaine transport system, permease component [Saccharomonospora viridis DSM 43017] Length = 310 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 18/141 (12%) Query: 70 LRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 L+ LS +V++ L V LAAKS + G+V+ P+LD MQ++P+ +L V +F + Sbjct: 92 LQTLSVVVLAALIAIVVGVPVGVLAAKSPKTGLVVRPVLDFMQTLPVFVYLVPAVFFFGI 151 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + PG V A A+ +++ + + R+ E +R+F Q + Sbjct: 152 GVVPGIVSTTVFAVPPAVRLTEL---------GIRQVDRETVEAARAFGARPRQVLREVE 202 Query: 185 VPFSMP----GLVWNMMMSMS 201 +P ++P G+ +M+++S Sbjct: 203 LPLAVPSIMAGVNQVIMLALS 223 >gi|82542857|ref|YP_406804.1| taurine transporter subunit [Shigella boydii Sb227] gi|81244268|gb|ABB64976.1| taurine transport system permease protein [Shigella boydii Sb227] gi|332098453|gb|EGJ03419.1| taurine transport system permease protein tauC [Shigella boydii 3594-74] Length = 269 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L + PL+V Sbjct: 83 SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 199 ILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|297626297|ref|YP_003688060.1| Binding-protein-dependent transport systems inner membrane component [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922062|emb|CBL56626.1| Binding-protein-dependent transport systems inner membrane component [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 296 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 25/217 (11%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T++ V+ I+A++ +PVG + + I P+ A PA PL+V V Y Sbjct: 71 TIWEAVLGCIVATVFALPVGYLVARVRLAEAAISPYLAASQAIPAVALAPLLVIWVG-YG 129 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L P + L L++F + +L + + G + ++ E A +GWR RYI P Sbjct: 130 LTPIVLLCSLIVF---FPLLLSTVLGLRSIDHEVVEAAELDGASGWRMIRYIEAPLSRAA 186 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI----AESTEKGSFPE-VVLGVL 560 ++G + ++V E G TGLG + A + G F +VL VL Sbjct: 187 LLSGVRNGFTLSVTGAVVGEFVMGG------TGLGLVVSMQSASADTTGLFSTLIVLCVL 240 Query: 561 IMCCF--VLALNRFL--------WHPLYLYGTRCLRL 587 M + ++A+ RF HP+ L LRL Sbjct: 241 AMVIYLGLIAVERFTDPYRVPRAAHPVPLETAPDLRL 277 >gi|91777497|ref|YP_552705.1| ABC sulfonate transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91690157|gb|ABE33355.1| ABC sulfonate transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 279 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 25/211 (11%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R I I + +G+ +GF P + + Q++ A P PLV+ Sbjct: 81 VSLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG 140 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW---WRYIILPG 501 + ++L ++F I N + G E+A + G W R IILPG Sbjct: 141 EVAKIFLVALAVLFP----IYINTMLGIRQIDPKLMELAK---VVGLDWPAVVRRIILPG 193 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL- 560 P +TG A AW A +++E + T G+G ++ E ++L ++ Sbjct: 194 AMPSILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVILLTIII 247 Query: 561 --IMCCFVLALNRFL------WHPLYLYGTR 583 I+ AL R L WH Y G R Sbjct: 248 YAIIGVVADALVRLLEAHFLTWHANYAKGAR 278 >gi|318607766|emb|CBY29264.1| taurine transport system permease protein TauC [Yersinia enterocolitica subsp. palearctica Y11] Length = 296 Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 135 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 186 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 187 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 241 >gi|225571297|ref|ZP_03780293.1| hypothetical protein CLOHYLEM_07395 [Clostridium hylemonae DSM 15053] gi|225159773|gb|EEG72392.1| hypothetical protein CLOHYLEM_07395 [Clostridium hylemonae DSM 15053] Length = 619 Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 12/134 (8%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+++V++LLF L + S R ++ PILD MQ++P+ +L ++ F V Sbjct: 430 VLASVVLALLFGLPVGILISNSPRANRIVRPILDTMQTMPVFVYLIPALLLFGLGNASAV 489 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 I + AI + + + + Q + ++ E +RSF + WQ + + +P ++P Sbjct: 490 IATVIYAIVPV----IRLTSLGIRQ----VDTEVVEAARSFGSTRWQTLFKVQIPQAIPT 541 Query: 191 ---GLVWNMMMSMS 201 G+ +MM+M+ Sbjct: 542 IMTGVNQTLMMAMA 555 >gi|225575131|ref|ZP_03783741.1| hypothetical protein RUMHYD_03220 [Blautia hydrogenotrophica DSM 10507] gi|225037690|gb|EEG47936.1| hypothetical protein RUMHYD_03220 [Blautia hydrogenotrophica DSM 10507] Length = 299 Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI ++++ +P + ++ VV+ +G + A+ FT+ V + Y + Sbjct: 142 PIFELVRPVPPIAWIPLVVVWMG-------VGLKAKALIIFFTAFV-PCVINSYTGIKLT 193 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + L +VSR+F S + FW +GVP S+P + + +++ W +VA+EM+ Sbjct: 194 NKTLIDVSRTFGASNREIFWKVGVPSSLPMVFAGIRVALGNSWSTLVAAEML 245 >gi|104784101|ref|YP_610599.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas entomophila L48] gi|95113088|emb|CAK17816.1| putative glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 281 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++ A V+ ++ AA + P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVTFATVVCVVIGVPLGIAAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y +C++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICDVPQELLDAGKAFGCSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 ISLGFEAGLAIVLLAIMLDRICKQP 273 >gi|46907247|ref|YP_013636.1| glycine betaine/L-proline ABC transporter permease [Listeria monocytogenes serotype 4b str. F2365] gi|254823712|ref|ZP_05228713.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes FSL J1-194] gi|254852511|ref|ZP_05241859.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes FSL R2-503] gi|254931399|ref|ZP_05264758.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes HPB2262] gi|255520605|ref|ZP_05387842.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes FSL J1-175] gi|300764225|ref|ZP_07074220.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|46880514|gb|AAT03813.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. F2365] gi|258605819|gb|EEW18427.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes FSL R2-503] gi|293582949|gb|EFF94981.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes HPB2262] gi|293592934|gb|EFG00695.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes FSL J1-194] gi|300515215|gb|EFK42267.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|328475365|gb|EGF46138.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria monocytogenes 220] gi|332311424|gb|EGJ24519.1| hypothetical protein LMOSA_19070 [Listeria monocytogenes str. Scott A] Length = 282 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|20090989|ref|NP_617064.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina acetivorans C2A] gi|19916076|gb|AAM05544.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina acetivorans C2A] Length = 276 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 14/118 (11%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS-QV 147 L+AK+ L L P LD MQ++P +L +++F G V G +FA+ + ++ Sbjct: 115 LSAKNEVLYHFLKPTLDFMQTMPPFVYLIPALLFF---GLGNVPGMIATVVFAMPPAIRL 171 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 N+ + +P++L EV+ +F +GWQK + +P ++P G+ +M+S+S Sbjct: 172 TNL------GIRQVPKELTEVADAFGSTGWQKLTKVELPVALPTIMAGINQCIMLSLS 223 >gi|187733136|ref|YP_001879072.1| taurine transporter subunit [Shigella boydii CDC 3083-94] gi|187430128|gb|ACD09402.1| taurine uptake ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|320174742|gb|EFW49872.1| Taurine transport system permease protein TauC [Shigella dysenteriae CDC 74-1112] Length = 275 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I IPVGI +G P + + P +L + PL+V Sbjct: 81 AASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|282889665|ref|ZP_06298204.1| hypothetical protein pah_c004o002 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500239|gb|EFB42519.1| hypothetical protein pah_c004o002 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 552 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T M +++LL F A + A + M+L P+ ++Q IP+ V++F Y Sbjct: 57 TLKEMAGGFILALLVAFPLAWMMAFWESMRMILQPLFIVIQCIPMFALAPLMVMWFGWSY 116 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 V+ L F +T ++YQ L + P+ L + ++ + WQ F+ L +P Sbjct: 117 TAIVLPTALMIFFP--------LTMNIYQGLLSTPQHLADYFKTLNATPWQFFFKLQLPA 168 Query: 188 SMP 190 S+P Sbjct: 169 SLP 171 >gi|260778174|ref|ZP_05887067.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio coralliilyticus ATCC BAA-450] gi|260606187|gb|EEX32472.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio coralliilyticus ATCC BAA-450] Length = 300 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 29/179 (16%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS + + + + A+S R+ + P+LDIMQ++P +L V Sbjct: 102 EDTMRTLSIITVCTMLSIALGIPIGIAMARSDRIQSAVTPMLDIMQTMPAFVYLIPVV-- 159 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + + +++ E + +F S Q+ W Sbjct: 160 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASAKQRLW 212 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P +MP G+ +MMS+S M+V+ ++I + G+G + +I Q Sbjct: 213 GVQLPLAMPTIMAGINQTIMMSLS----------MVVIA-SMIGVKGLGQPVLKSITNQ 260 >gi|114328963|ref|YP_746120.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114317137|gb|ABI63197.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 276 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 16/206 (7%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + D+L +WL ++ RV+V + +A + +P+G+ +G + + P Q L Sbjct: 79 HGDLLTHVWL---SLKRVLVGLAVALAVGVPLGLAVGSVRVVEAATSPVFQFLRMISPLS 135 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + P+ V + + L+ F W IL + G + +A S T W Sbjct: 136 WMPVAVMVLGVGDAP----IYFLLSFAAVWPILLSTADGVKQLDRRWLLLAQSLAATRWE 191 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--- 549 I+LPG+ +TG A G W + +E+ GLG + ++ ++ Sbjct: 192 TLTRIVLPGVLAPILTGVRLAIGILWIVLVPAEMLG------VAGGLGYLVLDTRDRMAY 245 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWH 575 G VVL + ++ + A+ R L+ Sbjct: 246 GELTAVVLVIGLLGFLLDAIARLLYR 271 >gi|21240957|ref|NP_640539.1| ABC transporter amino acid permease [Xanthomonas axonopodis pv. citri str. 306] gi|21106240|gb|AAM35075.1| ABC transporter amino acid permease [Xanthomonas axonopodis pv. citri str. 306] Length = 489 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 16/174 (9%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 + L +IPR+L + + + L W + W + +P + +V + + V+ Sbjct: 374 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTAA------VINVGTAT 427 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 +G +I G G I I+ DL IL + V+ L Q LF + W+ Sbjct: 428 LG-ALIGAGGYGQPILAGIRLDDLGLILEGAIPA-AVLALLVQALFEGVERWAT 479 >gi|330861878|emb|CBX72048.1| taurine transport system permease protein tauC [Yersinia enterocolitica W22703] Length = 296 Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 135 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 186 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 187 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 241 >gi|146311110|ref|YP_001176184.1| alkanesulfonate transporter permease subunit [Enterobacter sp. 638] gi|145317986|gb|ABP60133.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] Length = 263 Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 86/179 (48%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLVEMARSYGLSGFSLFIHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + Q L R + W+ + L+ Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQWLERSWLRWNPAYSLKEAN 262 >gi|312109994|ref|YP_003988310.1| binding-protein-dependent transporters inner membrane component [Geobacillus sp. Y4.1MC1] gi|311215095|gb|ADP73699.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. Y4.1MC1] Length = 279 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 10/180 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++FR ++ + I + GI +GF + P Q+L P PL + + Sbjct: 83 VSVFRAAAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + LL+ G + + N G +VA H + W+ +I+P P Sbjct: 143 ETSK----VLLIAKGAFFPVYVNTFIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 ++G + G AW +V+E+ T G+G + ++ + + V +G+++ Sbjct: 199 AILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAV 252 >gi|238788929|ref|ZP_04632719.1| Taurine ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] gi|238722956|gb|EEQ14606.1| Taurine ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] Length = 290 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 129 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 180 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 181 RSVAQVRVRAARALGASHWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 235 >gi|269119112|ref|YP_003307289.1| binding-protein-dependent transporters inner membrane component [Sebaldella termitidis ATCC 33386] gi|268612990|gb|ACZ07358.1| binding-protein-dependent transport systems inner membrane component [Sebaldella termitidis ATCC 33386] Length = 275 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 6/110 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N I+G + P + EVA ++ W+ +R I LP P G AW I Sbjct: 158 ILLNTISGIKSTPKAYIEVAKLYNKNSWKIFRQIYLPYALPNIFVGLRLGLSSAWMTVIA 217 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +E+ + T+G+G I ++ V+ G++++ + ++R L Sbjct: 218 AELIA------STSGIGYRINDARNLLQSDVVITGIIVVGLLGVIMDRIL 261 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 18/193 (9%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ I L+ TL S D ++ IP L ++ +++F K Sbjct: 87 RVMQGYGIGLILGVFMGTLMGISGSTNKFFSGTFDAIRQIPPLAWIPLVILWFGIGETSK 146 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 VI A+ F I + + + + P+ EV++ + + W+ F + +P+++P Sbjct: 147 VILIAKASFFPILLNTI--------SGIKSTPKAYIEVAKLYNKNSWKIFRQIYLPYALP 198 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTM 248 + + + +S W V+A+E+I GIG I A + + D++ ++ + Sbjct: 199 NIFVGLRLGLSSAWMTVIAAELIA------STSGIGYRINDARNLLQSDVVITGIIVVGL 252 Query: 249 LGVIFLYDQLLFR 261 LGVI D++L R Sbjct: 253 LGVIM--DRILDR 263 >gi|268590427|ref|ZP_06124648.1| glycine betaine/L-proline transport system permease protein ProW [Providencia rettgeri DSM 1131] gi|291314341|gb|EFE54794.1| glycine betaine/L-proline transport system permease protein ProW [Providencia rettgeri DSM 1131] Length = 391 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 205 ARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIIRL 259 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 260 TI---LGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 312 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 313 VVIASMIAVG-------GLGQMVLRGIGRLDM 337 >gi|125539527|gb|EAY85922.1| hypothetical protein OsI_07285 [Oryza sativa Indica Group] Length = 541 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+ V+ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 356 ARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 410 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 411 TIL---GIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 463 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 464 VVIASMIAVG-------GLGQMVLRGIGRLDM 488 >gi|332163281|ref|YP_004299858.1| taurine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667511|gb|ADZ44155.1| taurine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 296 Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 135 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 186 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 187 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 241 >gi|306824964|ref|ZP_07458307.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432791|gb|EFM35764.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 305 Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148 S + +L P ++++ IP + GF+ VV + +++ G G L+ IF +F + Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGI-LSGIFVLFVMILP 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +TF SL +PR E S + + WQ W + + + G+ ++ M+ + + Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229 Query: 209 ASEMIVVGDTVIP 221 A +M+V VIP Sbjct: 230 AIQMVVGNSAVIP 242 >gi|170724070|ref|YP_001751758.1| choline ABC transporter permease [Pseudomonas putida W619] gi|169762073|gb|ACA75389.1| choline ABC transporter, permease protein [Pseudomonas putida W619] Length = 281 Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 82/168 (48%), Gaps = 25/168 (14%) Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P+LD+MQ++P +L T+ F + + PG + +FAI + +T Y +C+ Sbjct: 128 PVLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVVFAI--AAPIRLT---YLGICD 178 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 +P++L + ++F S Q + +P +MP G+ +M+S+S M+V+ Sbjct: 179 VPQELLDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLS----------MVVIA 228 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 ++ G+G + A+ D+ A L ++ + + D++ +P + Sbjct: 229 -ALVGADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRICKQPEV 275 >gi|52424605|ref|YP_087742.1| ProW protein [Mannheimia succiniciproducens MBEL55E] gi|52306657|gb|AAU37157.1| ProW protein [Mannheimia succiniciproducens MBEL55E] Length = 338 Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 157 ARSTRASAIVKPVLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 211 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P L E +++F S Q + + +P +MP G+ +M+S+S Sbjct: 212 TILGIQ---QVPEALIEAAQAFGASKKQLLYKVQLPLAMPSIMAGVNQTLMLSLS----M 264 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 265 VVIASMIAVG-------GLGQMVLRGIGRLDM 289 >gi|322832257|ref|YP_004212284.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] gi|321167458|gb|ADW73157.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] Length = 263 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 21/192 (10%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R L I + + SR +L L ++++IP L + +++F Sbjct: 64 STFRALIGFAIGGSLGLLLGFITGLSRWGERLLDSSLQMLRNIPHLALIPLVILWFGIDE 123 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+ L +F I+ + Y + NI R L E+SRS+ LSG+ F + +P Sbjct: 124 SAKIFLVALGTLFPIY--------LNTYHGIRNIDRGLLEMSRSYGLSGFPLFIQVVLPG 175 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---I 241 ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ + Sbjct: 176 ALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIV 228 Query: 242 LYAMLTMLGVIF 253 LYA+L L + Sbjct: 229 LYAILGKLADVL 240 >gi|227497478|ref|ZP_03927707.1| sugar ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces urogenitalis DSM 15434] gi|226833052|gb|EEH65435.1| sugar ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces urogenitalis DSM 15434] Length = 277 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%) Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G L IF+ F TF M QS ++PR+LEE +R S +Q FW + +P + PGL Sbjct: 143 GVALPGIFSAFG------TFLMRQSFMSLPRELEESARLDGASPFQTFWKVMLPLARPGL 196 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 + ++ W ++ ++ +T +PL Sbjct: 197 SAVAITTVLWSWNDLLWPLVVTTRETSMPL 226 >gi|170693806|ref|ZP_02884963.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gi|170141224|gb|EDT09395.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 287 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T S Q P L+EV+R F WQ+ YL VP ++P L + ++ + W +V Sbjct: 167 VTLSTLQGFRQTPASLDEVARVFAYKRWQRIVYLVVPAAVPTLATGVRLAFTKAWLALVV 226 Query: 210 SEMIVVGD 217 E++ + Sbjct: 227 VELVASSE 234 >gi|84499626|ref|ZP_00997914.1| sulfonate ABC transporter, permease protein, putative [Oceanicola batsensis HTCC2597] gi|84392770|gb|EAQ04981.1| sulfonate ABC transporter, permease protein, putative [Oceanicola batsensis HTCC2597] Length = 278 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 20/161 (12%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFS 153 R GMV P++ + IP + L V++F G G++ A I F FT V + Sbjct: 118 RAGMV--PLVAALFPIPKIALLPLFVIWF-----GIGEGSKYALIAFGTFTPTV----VA 166 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y ++ N+ R L + +SF LS W + +P +MPG++ + +S++ +VA+EM+ Sbjct: 167 TYGAVDNVDRTLIRMGQSFGLSWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML 226 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVI 252 G GIG+YI A DL + +L++LGVI Sbjct: 227 --GAEF----GIGAYILQAGSLYDLERLFAGVVILSLLGVI 261 >gi|320539493|ref|ZP_08039162.1| putative glycine betaine transporter subunit [Serratia symbiotica str. Tucson] gi|320030618|gb|EFW12628.1| putative glycine betaine transporter subunit [Serratia symbiotica str. Tucson] Length = 349 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S+ V+ P+LD MQ+ P +L V+ F G V G + IFA+ + M Sbjct: 164 SRSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRM 218 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P +L E ++SF S Q + + +P +MP G+ +M+++S Sbjct: 219 TI---LGINQVPEELIEAAQSFGASPRQLLFKVQLPLAMPTIMVGVNQTLMLALS----M 271 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 272 VVIASMIAVG-------GLGQIVLRGIGRLDM 296 >gi|302340292|ref|YP_003805498.1| binding-protein-dependent transporters inner membrane component [Spirochaeta smaragdinae DSM 11293] gi|301637477|gb|ADK82904.1| binding-protein-dependent transport systems inner membrane component [Spirochaeta smaragdinae DSM 11293] Length = 251 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 41/73 (56%) Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 L+M+ W + N+ +G P ++E+A+++ +T + +++LP IFP ++G TA Sbjct: 117 LVMVHSALWPVYLNLQSGIDEIPPRYREMAANWEMTMTQRLFHLVLPSIFPSLLSGLKTA 176 Query: 514 CGGAWNASIVSEV 526 W A I +E+ Sbjct: 177 WARCWRALIAAEM 189 >gi|148974204|ref|ZP_01811737.1| putative permease of ABC transporter [Vibrionales bacterium SWAT-3] gi|145965901|gb|EDK31149.1| putative permease of ABC transporter [Vibrionales bacterium SWAT-3] Length = 285 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 96 QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 155 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + Sbjct: 156 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTKVPEELIEAGKAFGASRMKLLL 206 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV T++ G+G + A+ ++ Sbjct: 207 KVELPAALPSI-------MAGVTQCIMLSLSMVVIATLVGADGLGKPVVRALNTVNISQG 259 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 260 FEAGLAIVLVAIILDRLCKTP 280 >gi|197334765|ref|YP_002155547.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio fischeri MJ11] gi|197316255|gb|ACH65702.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio fischeri MJ11] Length = 360 Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+SR + PILD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 165 ARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 219 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P DL E SF + Q + + +P ++P G+ +M+S+S Sbjct: 220 TILGIQ---QVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 272 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 273 VVIASMIAVG-------GLGQMVLRGIGRLDM 297 >gi|307132314|ref|YP_003884330.1| glycine betaine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306529843|gb|ADM99773.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 406 Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 220 AHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 274 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E ++SF S Q + + +P +MP G+ +M+++S Sbjct: 275 TI---LGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 327 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 328 VVIASMIAVG-------GLGQMVLRGIGRLDM 352 >gi|296159783|ref|ZP_06842605.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295889997|gb|EFG69793.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 279 Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 25/211 (11%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R I I + +G+ +GF P + + Q++ A P PLV+ Sbjct: 81 VSLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG 140 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW---WRYIILPG 501 + ++L ++F I N + G E+A + G W R IILPG Sbjct: 141 EVAKIFLVALAVLFP----IYINTMLGIRQIDPKLMELAK---VVGLDWPAVVRRIILPG 193 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL- 560 P +TG A AW A +++E + T G+G ++ E ++L ++ Sbjct: 194 AMPSILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVILLTIII 247 Query: 561 --IMCCFVLALNRFL------WHPLYLYGTR 583 I+ AL R L WH Y G R Sbjct: 248 YAIIGVVADALVRLLEAHFLTWHANYAKGAR 278 >gi|295702996|ref|YP_003596071.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium DSM 319] gi|294800655|gb|ADF37721.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus megaterium DSM 319] Length = 281 Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 92/182 (50%), Gaps = 27/182 (14%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T +L++++IS++ A++S + ++ PILD MQ++P +L + + Sbjct: 89 QETMDTLALVLTSVLISIIVGIPLGIWASQSEKTARIITPILDFMQTMPAFVYLIPALFF 148 Query: 123 F-MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 F + + PG + + IFA+ T ++ N+ + +P DL E + ++ + QK Sbjct: 149 FGIGVVPGVI----SSVIFAMPPTIRLTNL------GIREVPADLVEAANAYGSTTKQKL 198 Query: 181 WYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + + +P + M G+ ++M+S+S M+V+ +++ PG+G+ + A+ Sbjct: 199 FKVQLPLATKTIMAGINQSIMLSLS----------MVVIA-SLVGAPGLGAEVYRAVSRL 247 Query: 237 DL 238 ++ Sbjct: 248 EV 249 >gi|188533859|ref|YP_001907656.1| Nitrate transporter permease component [Erwinia tasmaniensis Et1/99] gi|188028901|emb|CAO96767.1| Nitrate transporter permease component [Erwinia tasmaniensis Et1/99] Length = 287 Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ +++ + L +L ++ F AE A+ + IF +W M + + + I Sbjct: 132 PIISLLRPVSPLAWLPIGLLLFQR--------AEPASAWTIFICSIWPMILNTAEGVKRI 183 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 P+D V+R LS + + P +P ++ + +S+ W +VA+EM+ G Sbjct: 184 PQDYLNVARVLNLSEFTVMRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGG 238 Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 4/145 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A+++ IP G IG I++ P LL + P + + + Sbjct: 98 SLRRVATGFGLAAMVGIPAGFLIGRFHFIANMFNPIISLLRPVSPLAWLP--IGLLLFQR 155 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P ++ + + W ++ N G P D+ VA +++ + R I+ P + PY Sbjct: 156 AEPASAWTIFIC--SIWPMILNTAEGVKRIPQDYLNVARVLNLSEFTVMRKILFPAVLPY 213 Query: 506 YVTGAITACGGAWNASIVSEVASWG 530 +TG + G AW + +E+ + G Sbjct: 214 ILTGVRLSIGIAWLVIVAAEMLTGG 238 >gi|219851713|ref|YP_002466145.1| binding-protein-dependent transport systems inner membrane component [Methanosphaerula palustris E1-9c] gi|219545972|gb|ACL16422.1| binding-protein-dependent transport systems inner membrane component [Methanosphaerula palustris E1-9c] Length = 269 Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust. Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 9/189 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+V + S+I IP+GI +G + Q+ P + PL ++++ Sbjct: 75 ISLERVIVGFAVGSVIAIPLGIAMGRWALVHDLFDSLIQIFRPVPPLAWVPL---ALAWF 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++ GT + +L N + G + + E+A+ + R ++LP P Sbjct: 132 KIGLTS-MVFIIALGTFFPVLLNTLDGVRSVKKTWIEMAAILGANELQMLRTVVLPAALP 190 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG G AW + +E+ + ++GLG I S G P ++ G++ + Sbjct: 191 TIWTGLRVGFGIAWMCVVAAEM-----MPGTSSGLGYLILYSYNFGQVPVIIAGMIGIGV 245 Query: 565 FVLALNRFL 573 L ++ L Sbjct: 246 IGLGVDLLL 254 >gi|1384060|dbj|BAA12840.1| membrane component [Escherichia coli] Length = 275 Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ + A + IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R++ A+ ++LF S + +L PI+++ + +P L +L V++ Sbjct: 78 QHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + ++ + ++S S Q W+ Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWF 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELI 220 >gi|295676387|ref|YP_003604911.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] gi|295436230|gb|ADG15400.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] Length = 282 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 33/178 (18%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475 Q++ PA PLV+ LW + L+ G + + N G + Sbjct: 122 QMIRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFFPVYVNTFHGIRSV 170 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E+A S+ + G+ +R++ILPG P + G A G W IV+E S Sbjct: 171 DANLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 224 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCC-------FVLALNR--FLWHPLYLYGTRC 584 +G+G + E VV+G+L+ +L R WHP Y G + Sbjct: 225 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADMLAKSLERLSLRWHPAYQRGAKA 282 >gi|123444121|ref|YP_001008091.1| taurine transporter subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091082|emb|CAL13965.1| putative taurine transport system permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 267 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 106 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 157 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 158 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 212 >gi|322385471|ref|ZP_08059115.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus cristatus ATCC 51100] gi|321270209|gb|EFX53125.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus cristatus ATCC 51100] Length = 305 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ VV + ++ G G L+ IF +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|313117423|ref|YP_004044406.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Halogeometricum borinquense DSM 11551] gi|312294314|gb|ADQ68745.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Halogeometricum borinquense DSM 11551] Length = 274 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 16/165 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S L PI+ I++ IP L ++ F +++F + G A F +F W + Sbjct: 110 SDALDDACTPIIRILRPIPPLAWIVFAIIWFGLGHSG--------AAFIVFIGAFWITFY 161 Query: 153 SMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + Y + + R+L EV+ + + + W+ + +P + P L+ + S+ W V+A+E Sbjct: 162 NAYSGVESASRELMEVAETLGVDTDWRLIRRVVLPDATPELLTGLRTSVGQCWMMVIAAE 221 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + PG+G I + + MLT+ V + D Sbjct: 222 LFGA-------PGVGYEIITSSNNLATERSVAYMLTISAVFLVSD 259 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFPYYVTGAI 511 + ++ G W +N +G + + EVA + + T WR R ++LP P +TG Sbjct: 148 AFIVFIGAFWITFYNAYSGVESASRELMEVAETLGVDTDWRLIRRVVLPDATPELLTGLR 207 Query: 512 TACGGAWNASIVSEV 526 T+ G W I +E+ Sbjct: 208 TSVGQCWMMVIAAEL 222 >gi|83954131|ref|ZP_00962851.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Sulfitobacter sp. NAS-14.1] gi|83841168|gb|EAP80338.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Sulfitobacter sp. NAS-14.1] Length = 277 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + +LSA V+ + AA R+ + P+LD+MQ++P +L +V+ Sbjct: 91 EETTESLTLVLSACVVCMGVGVPIGIAAAHRPRMYRYMAPVLDLMQTLPTFVYLIPAIVF 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + I +Q+ + + P+ L E +++F Q W Sbjct: 151 FGIGMVPGLIATVIFVLPAPIRLTQL---------GIASTPKALLEAAQAFGAKPSQTLW 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 202 KIELPYALPQIMTGLNQTIMLSLS 225 >gi|238763748|ref|ZP_04624707.1| Taurine ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] gi|238698050|gb|EEP90808.1| Taurine ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] Length = 287 Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 126 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPITLAAVAGV 177 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 178 RSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELI 232 >gi|284034286|ref|YP_003384217.1| sugar ABC transporter permease-like protein [Kribbella flavida DSM 17836] gi|283813579|gb|ADB35418.1| ABC-type sugar transport systems permease component-like protein [Kribbella flavida DSM 17836] Length = 591 Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Query: 446 LNPNL-WLSLLMIFGTQW--YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 L P L WL L+ FG W Y++ AG A P+D ++ +TGWR WR + LP + Sbjct: 163 LGPGLFWLVLVSAFGWTWLGYVVSLFRAGLDAIPDDVSRTIAAEGVTGWRRWRVLELPLL 222 Query: 503 FPYYVTGAIT 512 P +TG +T Sbjct: 223 RP--ITGVVT 230 >gi|307727848|ref|YP_003911061.1| choline ABC transporter permease [Burkholderia sp. CCGE1003] gi|307588373|gb|ADN61770.1| choline ABC transporter, permease protein [Burkholderia sp. CCGE1003] Length = 300 Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ ISL+ AKSR + M++ P+LD+MQ++P +L + F G+V Sbjct: 96 LSSTFISLVLGVPLGIWTAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|283784761|ref|YP_003364626.1| aliphatic sulfonates ABC transporter permease [Citrobacter rodentium ICC168] gi|282948215|emb|CBG87782.1| putative aliphatic sulfonates ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 263 Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust. Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 23/220 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R L I ++ SR +L + +++++P L + +++ Sbjct: 60 QHLAISAWRALIGFSIGGSLGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F ++ + + + NI R L E++RS+ LSG F + Sbjct: 120 FGIDETAKIFLVALGTLFPVY--------INTWHGIRNIDRGLVEMARSYGLSGLPLFLH 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VILPGALPSVMVGVRFALGLMWL------TLIVAETISASSGIG-YLAMNAREFLQTDIV 224 Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 ILYA+L L + QLL R + W + ++ Sbjct: 225 VVAIILYALLGKLADV--SAQLLERVWLRWHPAYHMKEAN 262 >gi|255030327|ref|ZP_05302278.1| glycine betaine ABC transporter (permease) [Listeria monocytogenes LO28] Length = 236 Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 48 TQTLTLVLTSSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 107 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 108 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 157 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S +VV ++I G+G+ + A+ D Sbjct: 158 QLPMAKSTMMAGINQSIMLALS-----------MVVIASMIGAMGLGTRVYFAVGRND 204 >gi|167582013|ref|ZP_02374887.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 268 Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + E+ Sbjct: 108 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDAGLVEM 163 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 164 ARSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 217 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLYLYGTRC 584 + E VV+G+L+ VLA L R + WHP Y G R Sbjct: 218 TMNAREFLQTDVVVVGILLYAALGKLADVLAKWLERAMLRWHPAYQPGGRA 268 >gi|54303410|ref|YP_133403.1| putative permease of ABC transporter [Photobacterium profundum SS9] gi|46916840|emb|CAG23603.1| putative permease of ABC transporter [Photobacterium profundum SS9] Length = 282 Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 17/197 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 T + +LSA + S++ AA L ++ PILD+MQ+IP +L T+V F + Sbjct: 95 ETFVLVLSATMFSVIVGVPIGIAAAHRPWLYTIMRPILDLMQTIPTFVYLIPTLVLFGLG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG + IFAI + +T Y + +P +L E R+F S + + + + Sbjct: 155 VVPGLIS----TIIFAI--AAPIRLT---YLGISRVPEELVEAGRAFGASRMKLLFKVEL 205 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +MP + M+G ++ S +VV ++ G+G + A+ ++ A Sbjct: 206 PAAMPNI-------MAGITQCIMLSLSMVVISALVGADGLGKPVVRALNTVNISQGFEAG 258 Query: 246 LTMLGVIFLYDQLLFRP 262 L ++ V + D+L P Sbjct: 259 LAIVLVAIILDRLCKTP 275 >gi|110638367|ref|YP_678576.1| nitrate ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110281048|gb|ABG59234.1| nitrate ABC transporter, permease component [Cytophaga hutchinsonii ATCC 33406] Length = 377 Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 11/163 (6%) Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 ++++ I IP+GI +G + + I Q+L V+ LV + + + S Sbjct: 187 VLLSMFIAIPIGILLGLSETLRTSINWLIQILKPVSPVVWLLLVSMVIKTLLTDSTMDKS 246 Query: 454 LLMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L+ F + W L N G ++ D+ V+ + W+ I+LP FP T Sbjct: 247 FLISFISVGLCGMWATLVNTSMGVASVDKDYINVSKVLRLNVWKNIYKIVLPSSFPLIFT 306 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 G +W I E+ + ++ GLG+++ E + G+ Sbjct: 307 GIRITVSVSWMVLIAIELLA------QSPGLGSFVWEQFQNGA 343 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + ++ +D VS+ RL+ W+ + + +P S P + + +++S W Sbjct: 259 MWATLVNTSMGVASVDKDYINVSKVLRLNVWKNIYKIVLPSSFPLIFTGIRITVSVSWMV 318 Query: 207 VVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLLF 260 ++A E++ PG+GS++ D A IL AM + G+ FL D+++ Sbjct: 319 LIAIELLAQS------PGLGSFVWEQFQNGANDSNAKILVAMFVIGGIGFLLDKIMM 369 >gi|33321797|gb|AAQ06631.1| osmoprotectant transport protein OusBW [Erwinia chrysanthemi] Length = 406 Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 220 AHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 274 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E ++SF S Q + + +P +MP G+ +M+++S Sbjct: 275 TI---LGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 327 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 328 VVIASMIAVG-------GLGQMVLRGIGRLDM 352 >gi|315649176|ref|ZP_07902266.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] gi|315275395|gb|EFU38753.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] Length = 277 Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 27/170 (15%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +++A +IS+L AA SR +++P+LD MQ++P +L V +F + + PG Sbjct: 94 VITAALISVLLGVPLGIWAAYSRSASRIIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGV 153 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + + IFAI T + + + + +L E + +F + QK + + +P +M Sbjct: 154 IA----SVIFAI------PPTIRLTRLGIMQVSGELTEAADAFGSTSGQKLFKVQLPLAM 203 Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 P G+ +M+S+S M+V+ ++I GIG+ + A+ + Sbjct: 204 PTLMAGINQTIMLSLS----------MVVIA-SMIGAQGIGAEVYRAVTQ 242 >gi|237730897|ref|ZP_04561378.1| alkanesulfonate transporter permease subunit [Citrobacter sp. 30_2] gi|226906436|gb|EEH92354.1| alkanesulfonate transporter permease subunit [Citrobacter sp. 30_2] Length = 263 Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 101/220 (45%), Gaps = 23/220 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I ++ SR +L + +++++P L + +++ Sbjct: 60 QHLAISSWRALIGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + + + +I R L E++RS+ LSG+ F + Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------INTWHGIRSIDRGLVEMARSYGLSGFSLFVH 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VILPGALPSIMVGVRFALGLMWL------TLIVAETISANAGIG-YLAMNAREFLQTDVV 224 Query: 240 A---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 ILYA+L L + QLL R + W + ++ T Sbjct: 225 VVAIILYALLGKLADV--SAQLLERVWLRWHPAYHVKEAT 262 >gi|116332927|ref|YP_794454.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus brevis ATCC 367] gi|116098274|gb|ABJ63423.1| ABC-type proline/glycine betaine transport system, permease and substrate binding protein [Lactobacillus brevis ATCC 367] Length = 506 Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 21/198 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 V S+ Q+ + + +L A VI++ + +RL V++ I I+Q+IP L L Sbjct: 16 VQSIGQHIGLSLISLLIAAVIAIPLAIILMN----HQRLAKVMLQITSILQTIPSLALLG 71 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 L P IG + +I A+ V + + Y L I LEE + +F LS Sbjct: 72 I-------LIPLVGIGT-VPSIIALVIYAVMPIFQNTYSGLTTIDPSLEEAATAFGLSRR 123 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK-EQ 236 K + +P +MP ++ + ++M ++ + + +I G+G+YI L I+ Sbjct: 124 MKLLRIELPLAMPMIISGIRIAM----VMIIGTATLAA---LIGAGGLGTYILLGIETNN 176 Query: 237 DLLAILYAMLT-MLGVIF 253 + L I+ A+L+ +L ++F Sbjct: 177 NALLIIGAVLSAILALVF 194 >gi|323705112|ref|ZP_08116688.1| binding-protein-dependent transport systems inner membrane component [Thermoanaerobacterium xylanolyticum LX-11] gi|323535538|gb|EGB25313.1| binding-protein-dependent transport systems inner membrane component [Thermoanaerobacterium xylanolyticum LX-11] Length = 277 Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 10/182 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++FR++ I+ ++ + +G+ +G P I + + P P PL++ Sbjct: 85 SVSLFRIIGGFIVGAVPGLIIGLTMGLFPIIRNILDPIVAATYPIPKLALMPLIMIM--- 141 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LN +L +++ GT + +L N AG + +VA ++ + ++ + LPG Sbjct: 142 FGLN-DLEKIVVIAIGTFFIVLMNTAAGVINLDKIYMDVARNYGASKKDYYLTVALPGAL 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TG G A + +E+ ++G+G I ES P + + +IM Sbjct: 201 PMIFTGLKLGMGMALLLIVAAEMNG------ASSGIGYRIWESYNIFDIPAMFVSFIIMS 254 Query: 564 CF 565 Sbjct: 255 IL 256 >gi|323190755|gb|EFZ76024.1| putative aliphatic sulfonates transport permease protein ssuC [Escherichia coli RN587/1] Length = 263 Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG F ++ +P ++P ++ + ++ W ++ +E I Sbjct: 153 GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------ 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+ L + QLL R + W+ + L+ T Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALFGKLADV--SAQLLERFWLRWNPAYHLKEAT 262 >gi|264677370|ref|YP_003277276.1| probable ABC transporter permease HI0355 [Comamonas testosteroni CNB-2] gi|299533068|ref|ZP_07046454.1| probable ABC transporter permease protein HI0355 [Comamonas testosteroni S44] gi|262207882|gb|ACY31980.1| probable ABC transporter permease protein HI0355 [Comamonas testosteroni CNB-2] gi|298718953|gb|EFI59924.1| probable ABC transporter permease protein HI0355 [Comamonas testosteroni S44] Length = 253 Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 10/123 (8%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150 +S+ L +++P L ++QS PI+ VV L P +V+ L A F + S Sbjct: 84 RSQLLSKIIMPWLVVIQSTPIVAVAPIIVVTLGAGLLP-RVVITTLIAFFPLVVSTALG- 141 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 L ++P +L E+SRS R + +++W + +PF++P + + +S++ V + Sbjct: 142 -------LASVPAELVELSRSLRATTSRQYWQIRMPFAVPYVFSALKVSITLAIVGAVVA 194 Query: 211 EMI 213 E + Sbjct: 195 EFV 197 >gi|149188392|ref|ZP_01866685.1| putative permease of ABC transporter [Vibrio shilonii AK1] gi|148837610|gb|EDL54554.1| putative permease of ABC transporter [Vibrio shilonii AK1] Length = 280 Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F + + + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGATRMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKSP 275 >gi|91774063|ref|YP_566755.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit [Methanococcoides burtonii DSM 6242] gi|91713078|gb|ABE53005.1| ABC transporter permease protein [Methanococcoides burtonii DSM 6242] Length = 262 Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 + + L P+++I++ IP L ++ F +V+F + +A F +F V+ + + Sbjct: 92 KNVNHALDPLIEIIRPIPPLAWIPFAIVWFGLTHT--------SAGFVVFIGAVFPVIIN 143 Query: 154 MYQSLCNIPRDLEEVSRSFR-LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + ++P+ E ++ +S ++ +P +MP + + +SM GW +VA+EM Sbjct: 144 TFDGFKSVPKFYVEAAKVLGCMSSGSLIRHVALPSAMPSIASGIRISMGVGWMCLVAAEM 203 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 V T G+G I + +L ML +LG + L+ LFR Sbjct: 204 FGVSTT-----GLGYKIWWHYYLHQMDFVLVYML-ILGFLGLFIDRLFR 246 >gi|261252053|ref|ZP_05944627.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio orientalis CIP 102891] gi|260938926|gb|EEX94914.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio orientalis CIP 102891] Length = 280 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L ++ PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTIMRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F + + + Sbjct: 151 FGLGIVPGLI----STIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGATRMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKSP 275 >gi|330981307|gb|EGH79410.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 282 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 16/170 (9%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 RD+ D +L ++ S + LR+LS I V+A SR L P Sbjct: 70 RDLAD--------GALWKHISASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFA 121 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 ++SIP L ++ +++ K++ + A F ++ + V ++ I R L Sbjct: 122 GLRSIPSLAWVALLLLWLGIGETSKIVLIAIGAFFPVYLNGV--------AAIRGIDRKL 173 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 EV + + LS ++ + +P ++PGL + MS W F+VA+E+I Sbjct: 174 VEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIAA 223 >gi|328957271|ref|YP_004374657.1| glycine betaine transport system permease protein OpuAB [Carnobacterium sp. 17-4] gi|328673595|gb|AEB29641.1| glycine betaine transport system permease protein OpuAB [Carnobacterium sp. 17-4] Length = 281 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 27/164 (16%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L A ++S++ + L AKS+ ++ P+LD MQ++P +L V +F + + PG Sbjct: 103 VLVASLLSVIIGVPFGILMAKSKIANAIITPVLDFMQTMPAFVYLIPAVAFFGIGMVPG- 161 Query: 131 VIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS- 188 + A L IFAI T + N+ + + +L E + SF +G QK + + +P + Sbjct: 162 -VFASL--IFAIPPTVRFTNL------GIRQVSHELVEAAESFGSTGAQKLFKVELPLAK 212 Query: 189 ---MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 M G+ +M+++S M+V+ ++I PG+G + Sbjct: 213 STIMAGINQTVMLALS----------MVVIA-SMIGAPGLGREV 245 >gi|222148899|ref|YP_002549856.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221735885|gb|ACM36848.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 304 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 25/151 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF-TSQVWN 149 A+S R L P+LD+MQ++P +L V+ F GKV G I+AI ++ N Sbjct: 135 ARSDRAQSTLNPVLDVMQTMPSFVYLIPVVMIF---GIGKVPGLIAVVIYAIAPIIRLTN 191 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + R+ E + +F S QK + + +P ++P G+ +MMS++ Sbjct: 192 LGIRL------VSREAIEAADAFGSSERQKLFNVQIPLALPNIMAGINQTIMMSLA---- 241 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 VV + MI VG G+G + AI Q Sbjct: 242 MVVIASMIGVG-------GLGKNVLQAITNQ 265 >gi|239818092|ref|YP_002947002.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239804669|gb|ACS21736.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 294 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 14/131 (10%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N + G + ++ +++ + + W+ +RY++ P PY++ G A G + ++V Sbjct: 167 ILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVV 226 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFVLALNRFL-- 573 +E + + TGL + I ES+ + P + +LG++I F AL+R + Sbjct: 227 AEFTA--GTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFIVFA-ALSRLVLG 283 Query: 574 -WHPLYLYGTR 583 WH + R Sbjct: 284 HWHESEMRRER 294 >gi|83942956|ref|ZP_00955416.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Sulfitobacter sp. EE-36] gi|83845964|gb|EAP83841.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Sulfitobacter sp. EE-36] Length = 277 Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + +LSA V+ + AA R+ + P+LD+MQ++P +L +V+ Sbjct: 91 EETTESLTLVLSACVVCMGVGVPIGIAAAHRPRMYRYMAPVLDLMQTLPTFVYLIPAIVF 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + I +Q+ + + P+ L E +++F Q W Sbjct: 151 FGIGMVPGLIATVIFVLPAPIRLTQL---------GIASTPKALLEAAQAFGAKPSQTLW 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 202 KIELPYALPQIMTGLNQTIMLSLS 225 >gi|154496983|ref|ZP_02035679.1| hypothetical protein BACCAP_01276 [Bacteroides capillosus ATCC 29799] gi|150273807|gb|EDN00924.1| hypothetical protein BACCAP_01276 [Bacteroides capillosus ATCC 29799] Length = 249 Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 91/193 (47%), Gaps = 16/193 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LR+++ + I + V L ++ V P++ ++Q+IP + ++ +V+F + Sbjct: 60 TILRLIAGLAIGVGVGAVLGLLFGLCPKIEDVGTPLIHVLQAIPPVCWVVLALVWFG--F 117 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 GK +F + T+ V + ++ + ++ L E++R ++ S W+ ++ +P Sbjct: 118 NGK------PCVFIVATATVPTVVINLSHGVRSVDPQLLEMARLYQFSRWKMLRHVTLPS 171 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL-YAML 246 P + + + GGW V E++ GIG I A + AI+ +++L Sbjct: 172 IRPYFRSALEIVIGGGWKLAVMGEVLTTNS------GIGGAITTARLNIEPDAIIAWSLL 225 Query: 247 TMLGVIFLYDQLL 259 +LG +L +LL Sbjct: 226 LVLGC-YLTQRLL 237 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 10/161 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R++ + I + +G+ G P I P +L A P + VV + ++ Sbjct: 60 TILRLIAGLAIGVGVGAVLGLLFGLCPKIEDVGTPLIHVLQAIPPVCW---VVLALVWFG 116 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N + ++ T ++ N+ G + E+A + + W+ R++ LP I PY Sbjct: 117 FNGKPCV-FIVATATVPTVVINLSHGVRSVDPQLLEMARLYQFSRWKMLRHVTLPSIRPY 175 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + + GG W +++ EV + +G+G I + Sbjct: 176 FRSALEIVIGGGWKLAVMGEVLT------TNSGIGGAITTA 210 >gi|37676170|ref|NP_936566.1| ABC-type proline/glycine betaine transport system, permease component [Vibrio vulnificus YJ016] gi|37200711|dbj|BAC96536.1| ABC-type proline/glycine betaine transport system, permease component [Vibrio vulnificus YJ016] Length = 280 Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA R + +L PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPIGIMAAHRRWIYTLLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F + + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGANRLKLLL 201 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P ++P G+ +M+S+S +VV ++ G+G + A+ + Sbjct: 202 KVELPAALPSIMAGITQCIMLSLS-----------MVVIAALVGADGLGKPVVRALNTVN 250 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ V + D+L P Sbjct: 251 IAQGFEAGLAIVLVAIILDRLCKTP 275 >gi|329929493|ref|ZP_08283227.1| putative aliphatic sulfonates transport permease protein SsuC [Paenibacillus sp. HGF5] gi|328936381|gb|EGG32828.1| putative aliphatic sulfonates transport permease protein SsuC [Paenibacillus sp. HGF5] Length = 287 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 93/193 (48%), Gaps = 21/193 (10%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 ++ L SR+ + L P + +++ IP L +++F KV+ A F ++ Sbjct: 110 LIFGLLTGFSRKSEIFLDPTVQMLRMIPHLAIAPLIILWFGFGETSKVLIIAKGAFFPLY 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + ++ + L EVSR + S Q+ L +P S+P L+ + +S++ Sbjct: 170 VNT--------FLGIRSVDKKLFEVSRVLQYSRVQQMIKLIIPSSLPNLLMGLRLSLAVS 221 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALA----IKEQDLLAIL-YAMLTMLGVIFLYDQL 258 W +V +E+I G G+G I LA + EQ + +L +A++ M+ + L+ + Sbjct: 222 WLGLVVAELI--GSQ----SGVGFLINLAKQSSLTEQIFVGVLVFAVVGMM--VDLFVRS 273 Query: 259 LFRPMIVWSNKFR 271 L R ++ W + ++ Sbjct: 274 LERRLLKWRDSYK 286 >gi|300694481|ref|YP_003750454.1| binding-protein-dependent transport systems (glycine betaine and nitrate/sulfonate/bicarbonate) inner membrane component, ABC transporter, permease protein [Ralstonia solanacearum PSI07] gi|299076518|emb|CBJ35843.1| Binding-protein-dependent transport systems (glycine betaine and nitrate/sulfonate/bicarbonate) inner membrane component, ABC transporter, permease protein [Ralstonia solanacearum PSI07] Length = 298 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 2/116 (1%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N AG + N + V ++ ++G + I++P FP +TG AW Sbjct: 173 WAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTKILMPAAFPSILTGLKIGWAFAWRTL 232 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 I SE+ + GLG YI E+ + PEV G+L + L + ++ L Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVILIGLLVENLVFRTL 286 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 11/170 (6%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG + L M +P + L +V+F L G +I F I S VW ++ + Sbjct: 127 RLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGSGSLI-------FVIVHSVVWAVSLN 178 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + ++ L V R++ LSG + +P + P ++ + + + W ++ASE++ Sbjct: 179 THAGFLSVSNTLRMVGRNYGLSGMAYLTKILMPAAFPSILTGLKIGWAFAWRTLIASELV 238 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 G+G YI + + + +LT++ + L + L+FR + Sbjct: 239 F--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVILIGLLVENLVFRTL 286 >gi|237740106|ref|ZP_04570587.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|294782809|ref|ZP_06748135.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA] gi|229422123|gb|EEO37170.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|294481450|gb|EFG29225.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA] Length = 250 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 13/157 (8%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL----LAAFPANVFFPLVVS 439 +++ RV+ I+S++ I +GI++G ISSK + F QL + P + PL++ Sbjct: 58 SLSLRRVLAGFFISSVLGISLGIFMG----ISSKAKEFFQLTLTAIRQIPMIAWIPLIIL 113 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ ++++F + I+ N + G + + EVA + ++ + + L Sbjct: 114 WAGIGEVSK----IVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYL 169 Query: 500 PGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLR 535 P P TG G +W A + SE +AS I R Sbjct: 170 PSALPNIFTGLRLGLGASWMAVVASELIASSSGIGYR 206 >gi|149912652|ref|ZP_01901186.1| taurine ABC transporter, permease protein [Roseobacter sp. AzwK-3b] gi|149813058|gb|EDM72884.1| taurine ABC transporter, permease protein [Roseobacter sp. AzwK-3b] Length = 421 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 12/166 (7%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 S GY +FT + LY W ++ RV+V +++ IP+G +G P Sbjct: 215 SEGY--QNFTLWEHLY--W----SLVRVIVGFFFGALVGIPLGYAMGLSDWFRGWFDPIV 266 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + + P PLV+ +L+ W + AG S Sbjct: 267 EFMRPVPPLALIPLVIIWAGIGETGK----IILLFLAALWIMTIAARAGVSGVAISKVHA 322 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 A S + W+ RY+I+P P TGA A G W + +E+ + Sbjct: 323 AYSLGASKWQLMRYVIMPNSLPEIFTGARVAMGVCWGTVVAAELVA 368 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 15/165 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++ GK+I +F + +W MT + + + Sbjct: 264 PIVEFMRPVPPLALIPLVIIWAGIGETGKII--------LLFLAALWIMTIAARAGVSGV 315 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ Y+ +P S+P + ++M W VVA+E++ Sbjct: 316 AISKVHAAYSLGASKWQLMRYVIMPNSLPEIFTGARVAMGVCWGTVVAAELVAAEK---- 371 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 G G I +A + Q L I+ + ++GVI +L R W Sbjct: 372 --GAGMMIMVASRFQ-LTDIVLMGIILIGVIGYGIDILMRKAEKW 413 >gi|300790340|ref|YP_003770631.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Amycolatopsis mediterranei U32] gi|299799854|gb|ADJ50229.1| permease component of ABC-type nitrate/sulfonate/bicarbonate transport system [Amycolatopsis mediterranei U32] Length = 256 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 14/202 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 TM ++ I +A + +P G+ +G P + + + L P PLV+ + Sbjct: 58 TMLAWLIAIAVAIAVGVPAGLLLGSVPALRTATAAIVEFLRPIPITALVPLVLLVIGS-- 115 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P ++ L ++ + W I+FN I G E A + + +R + LP P+ Sbjct: 116 -GPEAKIT-LAVYASLWPIMFNTIYGMGEIDPVLMETARACGTSRFRILTSVALPQTAPF 173 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY-IAESTEKGSFPEVVLGVLIMCC 564 TG + + A + E + + GLG++ I ST F V+ G ++ Sbjct: 174 VFTGVRLSATISLIAVVSVEFLAGSQL-----GLGSFIIVASTGSARFDLVLAGTVVAG- 227 Query: 565 FVLALNRFLWHPLYLYGTRCLR 586 AL + L G R R Sbjct: 228 ---ALGYLINEGLEQLGKRLFR 246 >gi|221068441|ref|ZP_03544546.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] gi|220713464|gb|EED68832.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] Length = 253 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 10/100 (10%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150 +S+ L +++P L ++QS PI+ VV L P +V+ L A F + S Sbjct: 84 RSQLLSKIIMPWLVVIQSTPIVAVAPIIVVTLGAGLLP-RVVITTLIAFFPLVVSTALG- 141 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L ++P +L E+SRS R + +++W + +PF++P Sbjct: 142 -------LASVPAELVELSRSLRATTSRQYWQIRMPFAVP 174 >gi|51244059|ref|YP_063943.1| glycine betaine/L-proline transport system permease protein (ProW) [Desulfotalea psychrophila LSv54] gi|50875096|emb|CAG34936.1| probable glycine betaine/L-proline transport system permease protein (ProW) [Desulfotalea psychrophila LSv54] Length = 280 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 24/175 (13%) Query: 69 TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TL M LS++V ++ LA +S R L P+LD MQ+ P +L V+ F Sbjct: 95 TLAMVLSSVVFCMIAGIPLGILAGRSNRFNTFLRPVLDAMQTTPAFVYLVPIVMLF---S 151 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G +FA+ V + + Q + +L E + +F +GWQ + + +P Sbjct: 152 IGNVAGVIATIVFAL-PPLVRLTSLGIRQ----VHPELVEAALAFGATGWQVLFKVQIPL 206 Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++P G+ +MM++S VV + +I G G+G+ + L + D+ Sbjct: 207 ALPTIMAGINQTIMMALS----MVVIAALIGAG-------GLGAPVVLGLNTLDI 250 >gi|319761857|ref|YP_004125794.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gi|330826291|ref|YP_004389594.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317116418|gb|ADU98906.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gi|329311663|gb|AEB86078.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 370 Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 30/190 (15%) Query: 73 LSAMVISLLFTFVYA----TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L+ ++ SLLF V + A S R P+LD MQ+ P +L V+ F Sbjct: 165 LALVLTSLLFCVVLGLPLGIVLAASDRAQRFTRPLLDAMQTTPAFVYLVPVVMLF---GI 221 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G V G + +FA+ + L + DL E SR++ S WQ W + +P + Sbjct: 222 GNVPGVIVTIVFALPP-----LVRLTNLGLRQVRPDLIEASRAYGASPWQLLWKVQLPLA 276 Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P G+ +M+S+S VV + MI VG G+G + I D+ A Sbjct: 277 LPSIMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLA 322 Query: 245 MLTMLGVIFL 254 + LG++ L Sbjct: 323 SIGGLGIVLL 332 >gi|253687824|ref|YP_003017014.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754402|gb|ACT12478.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 537 Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 8/121 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR +L P + + IP LG++ +V F G G +LA I V T Sbjct: 111 SRRAEHLLHPTVYALAQIPTLGWIPLFMVLF-----GIDDGLKLAVIIKAVIIPV---TL 162 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + N+P L+EV+ + RL Q+ L +P ++P + + +++S W ++ E+ Sbjct: 163 HTQTGVRNVPHALQEVAHTLRLPWHQRLIKLTLPAALPTWLTGLRLALSQAWVSLIVVEL 222 Query: 213 I 213 + Sbjct: 223 L 223 >gi|242239080|ref|YP_002987261.1| binding-protein-dependent transporters inner membrane component [Dickeya dadantii Ech703] gi|242131137|gb|ACS85439.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech703] Length = 263 Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 15/173 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ S +T R L+ I + SR +L + +++++P L + +++ Sbjct: 60 QHLSISTWRALTGFAIGGALGLTLGFITGLSRTGERLLDTSIQMLRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + Y + +I L E++RS+ LSG++ F Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIRHIDSGLLEMARSYGLSGFRLFRE 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + +P ++P ++ + S+ W ++V +T+ GIG Y+A+ +E Sbjct: 172 VLLPGALPSIMVGVRFSLGLMWL------TLIVAETISANAGIG-YLAMNARE 217 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 21/203 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R + I + + +G G + Q+L P PLV+ + Sbjct: 63 SISTWRALTGFAIGGALGLTLGFITGLSRTGERLLDTSIQMLRNVPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G + E+A S+ ++G+R +R ++LPG Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIRHIDSGLLEMARSYGLSGFRLFREVLLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G + G W IV+E S G+G Y+A + + VV+ +I+ Sbjct: 179 PSIMVGVRFSLGLMWLTLIVAETIS------ANAGIG-YLAMNAREFLQTNVVVVAIILY 231 Query: 564 CFV--------LALNR--FLWHP 576 + LAL R WHP Sbjct: 232 ALLGKLADVIALALERIWLRWHP 254 >gi|312882313|ref|ZP_07742057.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370026|gb|EFP97534.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 280 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A +S+L +AA L +L P+LD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTMSVLIGVPVGIMAAHRPWLYTILRPVLDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 151 FGLGIVPGLI----STIIFAI--AAPIRLT---YLGMTKVPEELIEAGKAFGASRMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVIRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275 >gi|221639009|ref|YP_002525271.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] gi|221159790|gb|ACM00770.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] Length = 245 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A ++ IP+G +G + + F LAA P F PL++ + ++++ Sbjct: 63 AVLVGIPLGALMGMVRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLGTEAK----AMIV 118 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G I+ N AG A + E+A S + R +I+LPG P+ V G Sbjct: 119 FLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVG 171 >gi|170721475|ref|YP_001749163.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] gi|169759478|gb|ACA72794.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] Length = 304 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 11/138 (7%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149 A+S MV+ P+LD+MQ+ P +L V+ F + PG+V A A I +Q+ Sbjct: 119 ARSPGAWMVVRPVLDVMQTTPTFVYLVPVVMLFGVGNVPGEVAVATAAMPPLIRFTQL-- 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +C + ++ E ++F + WQ W + +P +MP ++ + ++ V Sbjct: 177 -------GICMVDSEIVEAGQAFGANKWQLLWEVQLPLAMPTILGGLNQTVLTAMVMSVV 229 Query: 210 SEMI-VVGDTVIPLPGIG 226 MI G ++ L GIG Sbjct: 230 ISMIGAEGLGLVVLQGIG 247 >gi|15668589|ref|NP_247387.1| nitrate transporter protein NrtB homolog CmpB [Methanocaldococcus jannaschii DSM 2661] gi|2501405|sp|Q57856|Y413_METJA RecName: Full=Putative ABC transporter permease protein MJ0413 gi|1591119|gb|AAB98402.1| nitrate transporter protein (nrtB) homolog (cmpB) [Methanocaldococcus jannaschii DSM 2661] Length = 267 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 9/191 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+ ++AS + IP+GI +G+ ++S +LL P + PL ++++ Sbjct: 73 ISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELLRPIPPLAWVPL---SLAWF 129 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L + + ++ G + IL N I+G P E A + G +++P P Sbjct: 130 GLG-EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAKGRDILIKVVIPASSP 188 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG G AW + +E+ + GLG I + V+ ++I+ Sbjct: 189 SILTGLRVGAGIAWMCVVAAEMLPSSN-----AGLGYLIMYAYSLSRMDVVIACMIIIGL 243 Query: 565 FVLALNRFLWH 575 L L+R L + Sbjct: 244 IGLVLDRGLRY 254 >gi|293365712|ref|ZP_06612421.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|306829765|ref|ZP_07462954.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|291316080|gb|EFE56524.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|304428116|gb|EFM31207.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 305 Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148 S + +L P ++++ IP + GF+ VV + +++ G G L+ IF +F + Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILP 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +TF SL +PR E S + + WQ W + + + G+ ++ M+ + + Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229 Query: 209 ASEMIVVGDTVIP 221 A +M+V VIP Sbjct: 230 AIQMVVGNSAVIP 242 >gi|222102581|ref|YP_002539620.1| ABC transporter membrane spanning protein (nitrate/sulfonates) [Agrobacterium vitis S4] gi|221739182|gb|ACM39915.1| ABC transporter membrane spanning protein (nitrate/sulfonates) [Agrobacterium vitis S4] Length = 282 Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust. Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 17/218 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + ++LR+L V + L L +L P L +++IP + ++ Sbjct: 78 ELAHHLVASSLRVLVGFVSGAAAGTLIGALTGYFTTLRRLLDPSLQAIRAIPSIAWVPLF 137 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F K++ F ++ + +L + R + EV + FRLS + Sbjct: 138 ILWFGIFETSKIVLIATGVFFPVY--------LGISTALREVDRKIVEVGKIFRLSNLEL 189 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 W + P +P V ++ + GW FVVA+E + + G+G + + Sbjct: 190 VWRILFPAVLPSFVVSLRAGLGLGWMFVVAAEFMGASE------GLGYLLVDGQQLGKPD 243 Query: 240 AILYAMLTMLGVIFLYDQLLF---RPMIVWSNKFRLER 274 I+ A+L + L D LL P++ W + + +R Sbjct: 244 QIIAAILAFAVIGKLSDALLVALTAPLLRWQDAYGGDR 281 >gi|126462024|ref|YP_001043138.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|126103688|gb|ABN76366.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] Length = 266 Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A ++ IP+G +G + + F LAA P F PL++ + ++++ Sbjct: 84 AVLVGIPLGALMGMMRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLGTEAK----AMIV 139 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G I+ N AG A + E+A S + R +I+LPG P+ V G Sbjct: 140 FLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVG 192 >gi|332289872|ref|YP_004420724.1| taurine transporter subunit [Gallibacterium anatis UMN179] gi|330432768|gb|AEC17827.1| taurine transporter subunit [Gallibacterium anatis UMN179] Length = 251 Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 14/164 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ T L + + + +F A L + S R+ L+P+L I Q+IP+ F + Sbjct: 54 QHTMVTLLEIFLGLFLGFIFGLFSAILLSISNRIATFLLPLLLISQAIPV-----FAIAP 108 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + L+ G + +++A I V T + Y L N P E++++ +++ WQ + Sbjct: 109 LLVLWLGYGLASKVAMTILIIYFPV---TAACYDGLRNTPEIWLELAQTMQITRWQMLFK 165 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 + +P ++P L + +++S +A V+G+ V G+G Sbjct: 166 VRLPAALPALASGLRIAVS------IAPIGAVIGEWVGANQGLG 203 >gi|324993129|gb|EGC25049.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK405] gi|324995568|gb|EGC27480.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK678] Length = 305 Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ +V + ++ G G L+ IF +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|297202258|ref|ZP_06919655.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] gi|197710225|gb|EDY54259.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] Length = 266 Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 17/175 (9%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P+LD + +P L L F+N++ G G ++A + VW T S ++ Sbjct: 101 LEPLLDALYVVPKLALLPV----FLNMF-GLGEGPQIALVATTVFFFVWISTMS---AVI 152 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +IP + + F S WQ F ++ +P S+P ++ ++ +VASE I D Sbjct: 153 SIPSGHRDAGQVFGASPWQMFRHVLLPASLPSVLVGARIAAGVAVLVIVASEQIAATD-- 210 Query: 220 IPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVIFLY-DQLLFRPMIVWSNKFR 271 G+G I + A+ + D++ + + +LGV+F ++L R + W+ + R Sbjct: 211 ----GLGHLIFDSRALFQNDVMFVGIVCVAVLGVLFSELVRVLGRLLTPWAPRDR 261 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 12/156 (7%) Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + + ++P L P P+ ++ P + L +F +++ + ++ Sbjct: 97 VRAALEPLLDALYVVPKLALLPVFLNMFGLGE-GPQIALVATTVF---FFVWISTMSAVI 152 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 + P+ ++ F + W+ +R+++LP P + GA A G A + SE + Sbjct: 153 SIPSGHRDAGQVFGASPWQMFRHVLLPASLPSVLVGARIAAGVAVLVIVASEQIA----- 207 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 T GLG I +S + F V+ V I+C VL + Sbjct: 208 -ATDGLGHLIFDS--RALFQNDVMFVGIVCVAVLGV 240 >gi|262373174|ref|ZP_06066453.1| nitrate ABC transporter, permease [Acinetobacter junii SH205] gi|262313199|gb|EEY94284.1| nitrate ABC transporter, permease [Acinetobacter junii SH205] Length = 293 Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust. Identities = 38/190 (20%), Positives = 86/190 (45%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV++ ++ A I +P+G+W+G + + + P +LL P + PL+ V + Sbjct: 99 AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLL---VIW 155 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + + LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 156 FGIGETTKV-LLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + +TG G W+ + SE+ + G+G + + + VVLG++++ Sbjct: 215 SHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 269 IVAVSFELFL 278 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R+L A+V ++ ++ + VL P++++++ IP L +L V++ Sbjct: 96 QHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIW 155 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + IF S + + S + + + E + S S Q FW+ Sbjct: 156 FG-------IG-ETTKVLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWH 207 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++ ++ + + + GW +VASE++ Sbjct: 208 VILPTALSHILTGIRIGLGVGWSTLVASELV 238 >gi|262067155|ref|ZP_06026767.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC 33693] gi|291379113|gb|EFE86631.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC 33693] Length = 250 Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 13/157 (8%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL----AAFPANVFFPLVVS 439 +++ RV+ I+S++ I +GI++G ISSK + F QL+ P + PL++ Sbjct: 58 SLSLRRVLAGFFISSVLGISLGIFMG----ISSKAKEFFQLILTAIRQIPMIAWIPLIIL 113 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ ++++F + I+ N + G + + EVA + ++ + + L Sbjct: 114 WAGIGEVSK----IVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYL 169 Query: 500 PGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLR 535 P P TG G +W A + SE +AS I R Sbjct: 170 PSALPNIFTGLRLGLGASWMAVVASELIASSSGIGYR 206 >gi|115359312|ref|YP_776450.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|170697541|ref|ZP_02888631.1| choline ABC transporter, permease protein [Burkholderia ambifaria IOP40-10] gi|172064102|ref|YP_001811753.1| choline ABC transporter, permease protein [Burkholderia ambifaria MC40-6] gi|115284600|gb|ABI90116.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|170137564|gb|EDT05802.1| choline ABC transporter, permease protein [Burkholderia ambifaria IOP40-10] gi|171996619|gb|ACB67537.1| choline ABC transporter, permease protein [Burkholderia ambifaria MC40-6] Length = 298 Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKLVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|46204882|ref|ZP_00049349.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 223 Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RVVV ++ + + +P+G+++G I + P Q+L P + PL + ++ Sbjct: 80 SLYRVVVGFVVGAGLALPLGLFMGSSDVIYRHVNPLMQVLRPIPPIAYIPL---SILWFG 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L N L+ G + +L N IAG + A S + +R +ILP PY Sbjct: 137 LG-NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPY 195 Query: 506 YVTGAITACGGAWNASIVSEV 526 ++GA G A+ IV+E+ Sbjct: 196 ILSGARIGIGTAFIVVIVAEM 216 >gi|323496152|ref|ZP_08101211.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio sinaloensis DSM 21326] gi|323318790|gb|EGA71742.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio sinaloensis DSM 21326] Length = 280 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F + + + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGATRMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKSP 275 >gi|206559984|ref|YP_002230748.1| aliphatic sulfonates transport permease [Burkholderia cenocepacia J2315] gi|198036025|emb|CAR51918.1| aliphatic sulfonates transport permease protein [Burkholderia cenocepacia J2315] Length = 270 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G + Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGAKA 270 >gi|117621146|ref|YP_857442.1| taurine transporter subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562553|gb|ABK39501.1| taurine uptake ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 276 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 19/199 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+++ + A++ + VG+ +G P + + P +L P + PL+V Sbjct: 84 SLQRILIALAAATLCGVTVGLAMGLSPTLRGMLDPLIELYRPVPPLAYLPLMVIWFGIGE 143 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + +AG A + W+ Y+I+PG P Sbjct: 144 TS-KVLLIYLAIFAP---VAMATLAGVQGAKQVRLRAARALGANRWQVLWYVIVPGALPD 199 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563 +TG G W+ + +E+ + T G+G + + E + V+ G+L++ Sbjct: 200 MLTGLRIGLGVGWSTLVAAELIA------ATRGVGFMVQAAGEFLATDVVLAGILVIALI 253 Query: 564 CFVL-----ALNRFL--WH 575 F L AL R L WH Sbjct: 254 AFTLELGLRALQRRLTPWH 272 Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R+L A+ + L S L +L P++++ + +P L +L V++ Sbjct: 79 QHLAASLQRILIALAAATLCGVTVGLAMGLSPTLRGMLDPLIELYRPVPPLAYLPLMVIW 138 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F KV+ LA IFA V T + Q + +R+ + WQ WY Sbjct: 139 FGIGETSKVLLIYLA-IFA----PVAMATLAGVQGAKQV---RLRAARALGANRWQVLWY 190 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + VP ++P ++ + + + GW +VA+E+I Sbjct: 191 VIVPGALPDMLTGLRIGLGVGWSTLVAAELI 221 >gi|322375501|ref|ZP_08050014.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp. C300] gi|321279764|gb|EFX56804.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp. C300] Length = 305 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148 S + +L P ++++ IP + GF+ VV + +++ G G L+ IF +F + Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILP 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +TF SL +PR E S + + WQ W + + + G+ ++ M+ + + Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229 Query: 209 ASEMIVVGDTVIP 221 A +M+V VIP Sbjct: 230 AIQMVVGNSAVIP 242 >gi|270292471|ref|ZP_06198682.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp. M143] gi|315613426|ref|ZP_07888334.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|331266102|ref|YP_004325732.1| ABC transporter membrane-spanning permease,phosphate transport [Streptococcus oralis Uo5] gi|270278450|gb|EFA24296.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp. M143] gi|315314422|gb|EFU62466.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|326682774|emb|CBZ00391.1| ABC transporter membrane-spanning permease,phosphate transport [Streptococcus oralis Uo5] Length = 305 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148 S + +L P ++++ IP + GF+ VV + +++ G G L+ IF +F + Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILP 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +TF SL +PR E S + + WQ W + + + G+ ++ M+ + + Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229 Query: 209 ASEMIVVGDTVIP 221 A +M+V VIP Sbjct: 230 AIQMVVGNSAVIP 242 >gi|257093017|ref|YP_003166658.1| binding-protein-dependent transport systems inner membrane component [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045541|gb|ACV34729.1| binding-protein-dependent transport systems inner membrane component [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 265 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 11/193 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R++V ++ +I IP+GI +G P +++ + P + P P++V + + Sbjct: 77 RLIVAGLLVILIGIPIGIVMGAAPQVNAALSPLVDPFRSAPVVALLPILVM---WMGIGE 133 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++ ++ L I G Y++ V A P + A T W R ++P P Sbjct: 134 SMKIAFLFI-GAVVYLIPMVRDAIQAVPQSYWIGARDLGATPWECIRSAVVPMAMPRIAD 192 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 I A W V+E +++ R GLG I + ++ +V G++++ LA Sbjct: 193 AVIVAFSVMWTYITVAE-----YVNAR-EGLGQLIQNARRFSAWDQVFAGIMVIIALALA 246 Query: 569 LNRFL-WHPLYLY 580 + + W LY Sbjct: 247 TYQLMIWLKRRLY 259 >gi|313619571|gb|EFR91235.1| glycine betaine transport system permease protein opuAB [Listeria innocua FSL S4-378] Length = 282 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVV----ASVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|262377103|ref|ZP_06070328.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145] gi|262307841|gb|EEY88979.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145] Length = 271 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ + L L+ I G + I N G + E+ Sbjct: 115 QMIRNIPALALIPLVIL---WFGIDESAKLFLVAI-GVFFPIYINTYHGIRSVDPQLIEM 170 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ +T W+ ++ IILPG P + G + G W IV+E S +G+G Sbjct: 171 GKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS------AQSGIGYM 224 Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRFL--WHPLY 578 + E V++G+L+ +AL RFL WH Y Sbjct: 225 TMNAREFLQTDVVLVGILLYALLGKLADVLAVALERFLLRWHAGY 269 >gi|332366473|gb|EGJ44221.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1059] Length = 305 Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ +V + ++ G G L+ IF +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|125717781|ref|YP_001034914.1| phosphate ABC transporter transmembrane protein [Streptococcus sanguinis SK36] gi|323351783|ref|ZP_08087437.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis VMC66] gi|125497698|gb|ABN44364.1| ABC transporter membrane-spanning permease-phosphate transport, putative [Streptococcus sanguinis SK36] gi|322122269|gb|EFX93995.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis VMC66] gi|324990873|gb|EGC22808.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK353] gi|325687892|gb|EGD29912.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK72] gi|325689910|gb|EGD31914.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK115] gi|325694312|gb|EGD36226.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK150] gi|325696845|gb|EGD38733.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK160] gi|327461397|gb|EGF07728.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1] gi|327469554|gb|EGF15023.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK330] gi|327474032|gb|EGF19445.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK408] gi|327489255|gb|EGF21048.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1058] gi|328946083|gb|EGG40229.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1087] gi|332359768|gb|EGJ37583.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK49] gi|332361482|gb|EGJ39286.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1056] Length = 305 Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ +V + ++ G G L+ IF +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|27366464|ref|NP_761991.1| choline ABC transporter permease [Vibrio vulnificus CMCP6] gi|320158303|ref|YP_004190681.1| L-proline glycine betaine ABC transport system permease ProW [Vibrio vulnificus MO6-24/O] gi|27358030|gb|AAO06981.1| choline ABC transporter, permease protein [Vibrio vulnificus CMCP6] gi|319933615|gb|ADV88478.1| L-proline glycine betaine ABC transport system permease protein ProW [Vibrio vulnificus MO6-24/O] Length = 266 Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA R + +L PILD+MQ++P +L T+V Sbjct: 77 QEMLETFVLVFAATTISVLIGVPIGIMAAHRRWIYTLLRPILDLMQTVPTFVYLIPTLVL 136 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F + + Sbjct: 137 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGANRLKLLL 187 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P ++P G+ +M+S+S M+V+ ++ G+G + A+ + Sbjct: 188 KVELPAALPSIMAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVRALNTVN 236 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ V + D+L P Sbjct: 237 IAQGFEAGLAIVLVAIILDRLCKTP 261 >gi|16128352|ref|NP_414901.1| taurine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89107238|ref|AP_001018.1| taurine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170079956|ref|YP_001729276.1| taurine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|238899660|ref|YP_002925456.1| taurine transporter subunit [Escherichia coli BW2952] gi|256024012|ref|ZP_05437877.1| taurine transporter subunit [Escherichia sp. 4_1_40B] gi|300947989|ref|ZP_07162133.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300957922|ref|ZP_07170092.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|301025816|ref|ZP_07189323.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301647281|ref|ZP_07247098.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|307137011|ref|ZP_07496367.1| taurine transporter subunit [Escherichia coli H736] gi|331640882|ref|ZP_08342017.1| taurine transport system permease protein TauC [Escherichia coli H736] gi|34396000|sp|Q47539|TAUC_ECOLI RecName: Full=Taurine transport system permease protein tauC gi|1657562|gb|AAB18090.1| membrane component [Escherichia coli str. K-12 substr. MG1655] gi|1786564|gb|AAC73470.1| taurine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85674508|dbj|BAE76148.1| taurine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169887791|gb|ACB01498.1| taurine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|238863626|gb|ACR65624.1| taurine transporter subunit [Escherichia coli BW2952] gi|260450443|gb|ACX40865.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli DH1] gi|299879958|gb|EFI88169.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300315386|gb|EFJ65170.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300452453|gb|EFK16073.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|301074569|gb|EFK89375.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|315135051|dbj|BAJ42210.1| taurine transporter subunit [Escherichia coli DH1] gi|315616702|gb|EFU97319.1| taurine transport system permease protein tauC [Escherichia coli 3431] gi|323943176|gb|EGB39332.1| inner membrane transport system [Escherichia coli E482] gi|331037680|gb|EGI09900.1| taurine transport system permease protein TauC [Escherichia coli H736] Length = 275 Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ + A + IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + + R++ A+ ++LF S + +L PI+++ + +P L +L V++ Sbjct: 78 QHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIW 137 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG E + I I+ + + S + ++ + ++S S Q W+ Sbjct: 138 FG-------IG-ETSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWF 189 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + GW +VA+E+I Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELI 220 >gi|323526223|ref|YP_004228376.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] gi|323383225|gb|ADX55316.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] Length = 288 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 34/191 (17%) Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQW 462 F+P + + Q++ PA PLV+ LW + L+ G + Sbjct: 116 FKP-VEIALDSTVQMIRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFF 163 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + N G + + E+A S+ + G +R++ILPG P + G A G W I Sbjct: 164 PVYVNTFHGIRSVDANLIEMARSYGVKGLALYRHVILPGALPSILVGVRFAFGLMWVTLI 223 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FL 573 V+E S +G+G + E VV+G+L+ VLA L R Sbjct: 224 VAETIS------AQSGIGYMTMNAREFLQTDVVVVGILLYAALGKIADVLAKSLERLSLR 277 Query: 574 WHPLYLYGTRC 584 WHP Y G + Sbjct: 278 WHPAYQRGGKA 288 >gi|302553443|ref|ZP_07305785.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] gi|302471061|gb|EFL34154.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] Length = 292 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+LS +++ + L A+SR +L P+L++++ IP + + ++ F + G Sbjct: 64 RILSGFLLAAVLGVATGVLVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLFPSNEQGI 123 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V AA F + S T ++L + EE R+ W+ + +P ++P Sbjct: 124 VFITCTAAFFPVLVS-----TRHAVRALTPV---WEEAVRTMGGGRWRILGSVVLPGALP 175 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 G+ + + + W V+++EMI Sbjct: 176 GVFGGLSVGIGVSWICVISAEMI 198 >gi|238024532|ref|YP_002908764.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia glumae BGR1] gi|237879197|gb|ACR31529.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia glumae BGR1] Length = 291 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L I + F ++A S R+G L+ +L M +P + L +++F L G Sbjct: 100 LLRGYAIGAVLAFALTSVAV-STRVGRDLLAMLTAMFNPLPSIALLPIALLWF-GLGTGS 157 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + S +W + +MY +P L R++ L G + W + VP ++P Sbjct: 158 LL-------FVLVHSVLWPLALNMYTGFLGVPATLRMAGRNYGLRGLRLVWLILVPAALP 210 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 211 SILSGLRVGWAFAWRTLIAAELV 233 >gi|299132877|ref|ZP_07026072.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] gi|298593014|gb|EFI53214.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] Length = 279 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +RRL L P L +++IP + ++ V++ KV + F I+ Sbjct: 109 ARRL---LDPTLQALRAIPSIAWVPLFVLWLGIFEMSKVALIAIGVFFPIY--------L 157 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + ++ ++ R + EV R FRLSG + +P +P V ++ + GW FVVA+E+ Sbjct: 158 GVMGAVLSVDRKIVEVGRIFRLSGPAMIRRILLPAVLPSYVVSLRQGLGLGWMFVVAAEL 217 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 + + + L G + K ++LA + + QL F P++ W + F Sbjct: 218 MGASEGLGYLLIDGQQLG---KPAEILAAIIVFALLGKTTDWLVQLAFAPLLRWQDAF 272 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/162 (20%), Positives = 63/162 (38%), Gaps = 10/162 (6%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G G+ P + P Q L A P+ + PL V + + ++ L+ G + Sbjct: 99 LGALCGYSPLARRLLDPTLQALRAIPSIAWVPLFVLWLGIFEMSK----VALIAIGVFFP 154 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I V+ + EV F ++G R I+LP + P YV G W + Sbjct: 155 IYLGVMGAVLSVDRKIVEVGRIFRLSGPAMIRRILLPAVLPSYVVSLRQGLGLGWMFVVA 214 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +E+ + GLG + + + G E++ +++ Sbjct: 215 AELMG------ASEGLGYLLIDGQQLGKPAEILAAIIVFALL 250 >gi|288555332|ref|YP_003427267.1| ABC transporter permease [Bacillus pseudofirmus OF4] gi|288546492|gb|ADC50375.1| ABC transporter (permease) (NSB type) [Bacillus pseudofirmus OF4] Length = 251 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 8/126 (6%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S+ L ++ +QS+P + +L +V F G LA +F I W M Sbjct: 82 ATSKLADETLGSLVVALQSVPSIVWLPLALVMFQ--------GGSLAILFVIILGGTWPM 133 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T +M + N+ L +R+ G + W + +P S+P + + ++ + GW ++A+ Sbjct: 134 TMNMRMGIKNVQPLLIRAARTMGYKGLELVWKVLIPASIPSALTGVRLAWAFGWRALMAA 193 Query: 211 EMIVVG 216 E++ G Sbjct: 194 ELLGRG 199 >gi|271501462|ref|YP_003334488.1| binding-protein-dependent transporter inner membrane component [Dickeya dadantii Ech586] gi|270345017|gb|ACZ77782.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech586] Length = 286 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ RVV ++A++I +P+GI +G + + +PF PA+ F PL++ Sbjct: 95 MTVMRVVAGFLLAALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIG 154 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+IF G+ + I+ V D E A + + +++PG Sbjct: 155 EMQ-----KILVIFIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSSRSVVTRVLIPGAA 209 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 210 PGIAELLRLVLGWAWTYVIVAELIG------ASSGIGHMIVDS 246 >gi|78485498|ref|YP_391423.1| binding-protein dependent transport system inner membrane protein [Thiomicrospira crunogena XCL-2] gi|78363784|gb|ABB41749.1| ATP-binding cassette (ABC) superfamily nitrate transporter, permease component [Thiomicrospira crunogena XCL-2] Length = 332 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 13/150 (8%) Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS--YYHLNPNLWLSLL-----MIFGTQ 461 G + + + P Q+ + PLV VS Y +P + L ++ Sbjct: 148 GLSANAYAAVNPLIQIFKPVSPLAWLPLVTMVVSAVYVTDDPAFDKAFLNSMFTVLLCCL 207 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N AG + D K V+ ++ W R I+LP P TG + G AW Sbjct: 208 WPTIINTAAGVATVTQDLKNVSQVLRLSWWTHVRKIVLPCSIPMMFTGLRISLGIAWMVL 267 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 I +E+ + + GLG ++ + + GS Sbjct: 268 IAAEMLA------QNPGLGKFVWDEFQNGS 291 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 65/143 (45%), Gaps = 11/143 (7%) Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 L ++F + +W + + + +DL+ VS+ RLS W + +P S+P + Sbjct: 196 LNSMFTVLLCCLWPTIINTAAGVATVTQDLKNVSQVLRLSWWTHVRKIVLPCSIPMMFTG 255 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI- 252 + +S+ W ++A+EM+ PG+G ++ + L + + M+G++ Sbjct: 256 LRISLGIAWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSNSLGRIMVAVIMIGIVG 309 Query: 253 FLYDQ--LLFRPMIVWSNKFRLE 273 F+ D+ L+ + + W L Sbjct: 310 FILDRGMLVLQKAVSWDKSVTLR 332 >gi|33866448|ref|NP_898007.1| glycine betaine/proline ABC transporter [Synechococcus sp. WH 8102] gi|33633226|emb|CAE08431.1| ABC transporter, glycine betaine/proline family, membrane component [Synechococcus sp. WH 8102] Length = 304 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 8/141 (5%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+A +++L LAA+ R + + P+LD+MQ++P +L V+ F G V Sbjct: 108 LTASLLALAIGLPLGVLAARQRSIWQLTRPLLDLMQTMPAFVYLIPAVMLFST---GAVP 164 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 IFA+ V +T + +P DL E RSF S WQ + +P ++P L Sbjct: 165 SVIATLIFAM--PPVVRLT---VLGIRQVPADLIEAGRSFGCSEWQLLTKVQLPNALPTL 219 Query: 193 VWNMMMSMSGGWFFVVASEMI 213 + + ++ VV + MI Sbjct: 220 MTGVNQTIMLALSMVVIASMI 240 >gi|328470867|gb|EGF41778.1| putative permease [Vibrio parahaemolyticus 10329] Length = 298 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 109 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 168 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 169 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGIIKVPEELLEAGKAFGASRMKLLF 219 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 220 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 272 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 273 FEAGLAIVLVAIILDRLCKAP 293 >gi|261404676|ref|YP_003240917.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] gi|261281139|gb|ACX63110.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] Length = 287 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 93/193 (48%), Gaps = 21/193 (10%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 ++ L SR+ + L P + +++ IP L +++F KV+ A F ++ Sbjct: 110 LIFGLLTGFSRKSEIFLDPTVQMLRMIPHLAIAPLIILWFGFGETSKVLIIAKGAFFPLY 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + ++ + L EVSR + S Q+ L +P S+P L+ + +S++ Sbjct: 170 VNT--------FLGIRSVDKKLFEVSRVLQYSRVQQIIKLIIPSSLPNLLMGLRLSLAVS 221 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALA----IKEQDLLAIL-YAMLTMLGVIFLYDQL 258 W +V +E+I G G+G I LA + EQ + +L +A++ M+ + L+ + Sbjct: 222 WLGLVVAELI--GSQ----SGVGFLINLAKQSSLTEQIFVGVLVFAVVGMM--VDLFVRS 273 Query: 259 LFRPMIVWSNKFR 271 L R ++ W + ++ Sbjct: 274 LERRLLKWRDSYK 286 >gi|29828678|ref|NP_823312.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29605782|dbj|BAC69847.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 303 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 11/219 (5%) Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I N + +L IW ++ R ++ + A +I P+G+ + + + I P Q L Sbjct: 88 IENAWLEGKLLGYIW---TSVSRGLLGFLFALVIGTPLGLLVARVRFVRAAIGPILQGLQ 144 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 + P+ + P V ++ LN N + +++ G I +++G P F + Sbjct: 145 SLPSVAWVP---PAVVWFGLN-NSMMYTVILLGAVPSIANGLVSGVDQVPPLFLRAGRTM 200 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAE 545 TG R +++LP P YV G +W + + +E +AS+ + + GLG + Sbjct: 201 GATGLRGTWHVVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLEN 257 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584 V +L++ +A++ ++ PL + R Sbjct: 258 GRNAIDMAMVFEAILLILVVGIAIDLLIFSPLERWVLRS 296 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 18/205 (8%) Query: 73 LSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 +S ++ LF V T L A+ R + + PIL +QS+P + ++ VV+F Sbjct: 105 VSRGLLGFLFALVIGTPLGLLVARVRFVRAAIGPILQGLQSLPSVAWVPPAVVWF----- 159 Query: 129 GKVIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G + ++ I V ++ + + +P R+ +G + W++ +P Sbjct: 160 ----GLNNSMMYTVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLRGTWHVVLPA 215 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++PG V + + W ++A+E+I D + G+G + D+ + A+L Sbjct: 216 ALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNAIDMAMVFEAIL 272 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFR 271 +L V D L+F P+ W + R Sbjct: 273 LILVVGIAIDLLIFSPLERWVLRSR 297 >gi|22127835|ref|NP_671258.1| taurine transporter subunit [Yersinia pestis KIM 10] gi|45440044|ref|NP_991583.1| taurine transporter subunit [Yersinia pestis biovar Microtus str. 91001] gi|51598010|ref|YP_072201.1| taurine transporter subunit [Yersinia pseudotuberculosis IP 32953] gi|108809279|ref|YP_653195.1| taurine transporter subunit [Yersinia pestis Antiqua] gi|108814043|ref|YP_649810.1| taurine transporter subunit [Yersinia pestis Nepal516] gi|145597430|ref|YP_001161505.1| taurine transporter subunit [Yersinia pestis Pestoides F] gi|150260765|ref|ZP_01917493.1| putative taurine transport system permease protein [Yersinia pestis CA88-4125] gi|153947400|ref|YP_001402884.1| taurine transporter subunit [Yersinia pseudotuberculosis IP 31758] gi|162419908|ref|YP_001608012.1| taurine transporter subunit [Yersinia pestis Angola] gi|165927845|ref|ZP_02223677.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939995|ref|ZP_02228531.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010451|ref|ZP_02231349.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213174|ref|ZP_02239209.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398652|ref|ZP_02304176.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418878|ref|ZP_02310631.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425704|ref|ZP_02317457.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468834|ref|ZP_02333538.1| taurine ABC transporter, permease protein [Yersinia pestis FV-1] gi|170022521|ref|YP_001719026.1| taurine transporter subunit [Yersinia pseudotuberculosis YPIII] gi|186897206|ref|YP_001874318.1| taurine transporter subunit [Yersinia pseudotuberculosis PB1/+] gi|218927393|ref|YP_002345268.1| taurine transporter subunit [Yersinia pestis CO92] gi|229836334|ref|ZP_04456501.1| putative taurine transport system permease protein [Yersinia pestis Pestoides A] gi|229840042|ref|ZP_04460201.1| putative taurine transport system permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842124|ref|ZP_04462279.1| putative taurine transport system permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229904576|ref|ZP_04519687.1| putative taurine transport system permease protein [Yersinia pestis Nepal516] gi|270488210|ref|ZP_06205284.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294502269|ref|YP_003566331.1| putative taurine transport system permease protein [Yersinia pestis Z176003] gi|21960968|gb|AAM87509.1|AE014000_13 taurine ABC transport system inner membrane permease protein [Yersinia pestis KIM 10] gi|45434899|gb|AAS60460.1| putative taurine transport system permease protein [Yersinia pestis biovar Microtus str. 91001] gi|51591292|emb|CAH22958.1| ABC taurine transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108777691|gb|ABG20210.1| taurine transport system permease protein [Yersinia pestis Nepal516] gi|108781192|gb|ABG15250.1| putative taurine transport system permease protein [Yersinia pestis Antiqua] gi|115346004|emb|CAL18869.1| putative taurine transport system permease protein [Yersinia pestis CO92] gi|145209126|gb|ABP38533.1| taurine transport system permease protein [Yersinia pestis Pestoides F] gi|149290173|gb|EDM40250.1| putative taurine transport system permease protein [Yersinia pestis CA88-4125] gi|152958895|gb|ABS46356.1| taurine ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|162352723|gb|ABX86671.1| taurine ABC transporter, permease protein [Yersinia pestis Angola] gi|165912035|gb|EDR30676.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920121|gb|EDR37422.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990541|gb|EDR42842.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205472|gb|EDR49952.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962872|gb|EDR58893.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051156|gb|EDR62564.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055394|gb|EDR65188.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749055|gb|ACA66573.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|186700232|gb|ACC90861.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|229678694|gb|EEO74799.1| putative taurine transport system permease protein [Yersinia pestis Nepal516] gi|229690434|gb|EEO82488.1| putative taurine transport system permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696408|gb|EEO86455.1| putative taurine transport system permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706402|gb|EEO92409.1| putative taurine transport system permease protein [Yersinia pestis Pestoides A] gi|262360349|gb|ACY57070.1| putative taurine transport system permease protein [Yersinia pestis D106004] gi|270336714|gb|EFA47491.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294352728|gb|ADE63069.1| putative taurine transport system permease protein [Yersinia pestis Z176003] gi|320013319|gb|ADV96890.1| putative taurine transport system permease protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 284 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 123 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLAAVAGV 174 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 175 RSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 229 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/187 (18%), Positives = 77/187 (41%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ V ++ A ++ +P GI +G ++ + P ++ P + PL+V Sbjct: 90 AASLGRIFVALLAAVVLGVPTGIAMGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGI 149 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + +AG + + A + + W+ +++LP Sbjct: 150 GETS-KILLIYLAIFAP---VTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSAL 205 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 206 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 259 Query: 564 CFVLALN 570 + Sbjct: 260 IIAFGME 266 >gi|323498902|ref|ZP_08103885.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio sinaloensis DSM 21326] gi|323316014|gb|EGA69042.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio sinaloensis DSM 21326] Length = 299 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 29/179 (16%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS + + + + + A+S R+ + P+LD+MQ++P +L V Sbjct: 101 EDTMRTLSIITVCTMLSIILGIPIGIAMARSNRVQSTVTPMLDVMQTMPAFVYLIPVV-- 158 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + + +++ E + +F S Q+ W Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASAKQRLW 211 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P +MP G+ +MM++S M+V+ ++I + G+G + +I Q Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259 >gi|116872417|ref|YP_849198.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741295|emb|CAK20417.1| glycine betaine/L-proline ABC transporter, permease protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 282 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSSIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|94310314|ref|YP_583524.1| binding-protein-dependent transport systems inner membrane component [Cupriavidus metallidurans CH34] gi|93354166|gb|ABF08255.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 268 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ G + + N G A E+A S+ ++GWR +R +ILPG P + G + Sbjct: 139 LVALGVFFPVYLNTYHGIRAVDPALVEMARSYGLSGWRLYREVILPGALPGILVGVRFSL 198 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-------CFVL 567 G W IV+E S +G+G + E V++G+L+ Sbjct: 199 GLMWVILIVAETIS------AQSGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLSR 252 Query: 568 ALNR--FLWHPLYL 579 AL R WHP YL Sbjct: 253 ALERHWLRWHPGYL 266 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 21/166 (12%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R +L L ++++IP L + +++F K+ L F ++ + Sbjct: 100 RTAATLLDSTLQMVRNIPPLALIPLVILWFGIDETAKLFLVALGVFFPVY--------LN 151 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y + + L E++RS+ LSGW+ + + +P ++PG++ + S+ W ++ Sbjct: 152 TYHGIRAVDPALVEMARSYGLSGWRLYREVILPGALPGILVGVRFSLGLMWV------IL 205 Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIF 253 +V +T+ GIG Y+ + +E D++ + LYA+L L + Sbjct: 206 IVAETISAQSGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL 250 >gi|269795239|ref|YP_003314694.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Sanguibacter keddieii DSM 10542] gi|269097424|gb|ACZ21860.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Sanguibacter keddieii DSM 10542] Length = 293 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 74/153 (48%), Gaps = 8/153 (5%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L QY + +T R+L I + + + S +L P D ++++P L ++ V Sbjct: 97 LGQYVAISTQRVLIGFAIGAVIGLLLGAVVGLSHWARGLLAPSFDGLRAVPSLAWVPLLV 156 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++ K+I + A F ++T+ + +L ++ L E R++ LSG + Sbjct: 157 LWVGINEDSKIILIAIGAFFPVYTT--------VAGALRHVDPHLVEAGRAYGLSGPRLL 208 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P +P ++ + ++++ W F+VA+E++ Sbjct: 209 AQVQLPAVVPSVLAGLRLALAQSWLFLVAAELL 241 >gi|170751535|ref|YP_001757795.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] gi|170658057|gb|ACB27112.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] Length = 308 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 7/124 (5%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIF +F + + M S Q + + R+ V+R+ + Q + + VP +PGL+ + Sbjct: 172 AIFMVFIALFFTMVLSTIQQIDGVNRNYINVARTMGATKRQIYARVIVPAILPGLLAVLR 231 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +++ G W V+ +E VG G+G I LA + ++++ +T++G++ Sbjct: 232 LNLFGAWMVVLVAEATGVGY------GLGQVIMLARNTFN-PSLVFFTITLIGLLGFAFD 284 Query: 258 LLFR 261 LLFR Sbjct: 285 LLFR 288 >gi|221069604|ref|ZP_03545709.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] gi|220714627|gb|EED69995.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] Length = 287 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ I+ASI+ +P+GI +G + + +PF PA+ F PL++ Sbjct: 96 MTVWRVMGGFILASIVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVG 155 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+IF G+ + I V D E A + + + +++PG Sbjct: 156 EAQ-----KLLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGIVKRVLIPGAA 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 211 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 247 >gi|91780201|ref|YP_555408.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692861|gb|ABE36058.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 283 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 34/67 (50%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T S Q P LEEV+R + S WQ+ Y+ +P ++P L + ++ + W +V Sbjct: 164 TLSTLQGFRQSPHSLEEVARGYGYSEWQRIVYVVLPAAVPTLATGVRLAFTKAWLALVVV 223 Query: 211 EMIVVGD 217 E++ + Sbjct: 224 ELVASSE 230 >gi|81429307|ref|YP_396308.1| putative glycine/betaine/carnitine ABC transporter, membrane-spanning subunit [Lactobacillus sakei subsp. sakei 23K] gi|78610950|emb|CAI56002.1| Putative glycine/betaine/carnitine ABC transporter, membrane-spanning subunit [Lactobacillus sakei subsp. sakei 23K] Length = 280 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 23/176 (13%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +ISL+ AKS + PILD MQ++P +L V +F + Sbjct: 93 TQTLTLVLTSSLISLVIGVPLGIWMAKSDIAQAIFKPILDFMQTMPAFVYLIPAVAFFGI 152 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNM--TFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFW 181 + PG +F S ++ M T M + +P +L E + S+ + WQK Sbjct: 153 GMVPG------------VFASVIFAMPPTVRMTNLGIRQVPTELIEAADSYGSTEWQKLI 200 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P + L+ + SM ++A M+V+ ++I G+G+ + A+ D Sbjct: 201 KVQLPLAKSTLMAGVNQSM------MLALSMVVIA-SMIGAMGLGTRVYFAVGRND 249 >gi|332361839|gb|EGJ39642.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK355] Length = 309 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 75 PSGKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 134 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ +V + ++ G G L+ IF +F + +TF SL +PR E Sbjct: 135 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 193 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 194 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 246 >gi|271501794|ref|YP_003334820.1| binding-protein-dependent transporter inner membrane component [Dickeya dadantii Ech586] gi|270345349|gb|ACZ78114.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech586] Length = 400 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 214 ANSNRAVRIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 268 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E ++SF S Q + + +P +MP G+ +M+++S Sbjct: 269 TL---LGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLALS----M 321 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 322 VVIASMIAVG-------GLGQMVLRGIGRLDM 346 >gi|56965478|ref|YP_177210.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus clausii KSM-K16] gi|56911722|dbj|BAD66249.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus clausii KSM-K16] Length = 255 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 4/141 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++R + ++I I + +GI G+ + F Q++ P PLV+ + Sbjct: 61 ISLYRAFIGLLIGGAIGLLLGILNGWSTWSFYTVDTFVQMIRNIPHLALLPLVIVWLGIG 120 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L+ G + I N + G + + E+ + + GW +R++ LPG P Sbjct: 121 EASK----IFLVALGVMFPIYINTLHGIRSVNRGYIEMGKMYGLKGWGLFRHVYLPGALP 176 Query: 505 YYVTGAITACGGAWNASIVSE 525 G A G W IV+E Sbjct: 177 SIFVGIRYALGVMWLTLIVAE 197 >gi|16800083|ref|NP_470351.1| hypothetical protein lin1014 [Listeria innocua Clip11262] gi|16413473|emb|CAC96245.1| gbuB [Listeria innocua Clip11262] Length = 282 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|309779007|ref|ZP_07673777.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308922354|gb|EFP67981.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 298 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 2/116 (1%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N AG + N + V ++ ++G + I++P FP +TG AW Sbjct: 173 WAVSLNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTL 232 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 I SE+ + GLG YI E+ + PEV G+L + L + ++ L Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTL 286 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 11/172 (6%) Query: 93 SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 S RLG + L M +P + L +V+F L G +I F I S VW ++ Sbjct: 125 SNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLI-------FVIVHSVVWAVS 176 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ L V R++ LSG + +P + P ++ + + + W ++ASE Sbjct: 177 LNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 ++ G+G YI + + + +LT++ + L + L+FR + Sbjct: 237 LVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTL 286 >gi|220923325|ref|YP_002498627.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219947932|gb|ACL58324.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 283 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 23/200 (11%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + A V++L+ A SRR + P+LD+MQ++P + VY Sbjct: 89 QSTVETLVLVTLATVVALVIGIPVGICCALSRRAWRLFSPLLDMMQTLP-------SFVY 141 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + P +GA ++A FA V + + +P +L E S +F S QK + Sbjct: 142 LIPALPFFGLGA-VSACFATIVFSVPPVIRLTALGIRGVPTELVEASDAFGGSAAQKLFK 200 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++P G+ MM+++S VV + MI G G+G + +I+ + Sbjct: 201 VQLPLALPTIMAGVNQTMMLALS----MVVIAAMIGAG-------GLGREVWQSIQRLEA 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 A A + ++ V + D++ Sbjct: 250 GAGFEAGIGIVIVAVILDRV 269 >gi|270265364|ref|ZP_06193625.1| transporter [Serratia odorifera 4Rx13] gi|270040768|gb|EFA13871.1| transporter [Serratia odorifera 4Rx13] Length = 375 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+ ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 190 ARSKHAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 244 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 245 TI---LGIKQVPEDLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 298 VVIASMIAVG-------GLGQMVLRGIGRLDM 322 >gi|260438039|ref|ZP_05791855.1| ABC transporter, permease protein, cysTW family [Butyrivibrio crossotus DSM 2876] gi|292809518|gb|EFF68723.1| ABC transporter, permease protein, cysTW family [Butyrivibrio crossotus DSM 2876] Length = 254 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N +G + + KE+A FH + ++ YI +P P++++G +CG AW + I +E+ Sbjct: 134 NTFSGIAHTDSQMKEMAGVFHFSPFKKLVYIYMPYAAPHFLSGVKLSCGFAWKSGIAAEI 193 >gi|16329886|ref|NP_440614.1| ABC transporter membrane protein [Synechocystis sp. PCC 6803] gi|1652372|dbj|BAA17294.1| integral membrane components of other binding-protein-dependent transport system [Synechocystis sp. PCC 6803] Length = 280 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 18/159 (11%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RVV + ++ IP+GI +G P I S +P ++ PA F PL+ + Y ++ Sbjct: 92 RVVGGFFLGGLVAIPLGILMGTFPSIRSLTEPIIGVVRYMPAPAFIPLL---IIYLGIDE 148 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++L+ I GT ++ ++ P + EV ++ + G R + I+ I PY + Sbjct: 149 ASKIALIFI-GTIFFNTLMIMDAVKFIPKELIEV--TYTLGGLR--KQILFKVITPYIIP 203 Query: 509 GAITA----CGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + A AWN +V+E+ + + GLG I Sbjct: 204 NILDAFRINMAAAWNLVVVAELVAADN------GLGKRI 236 >gi|269793527|ref|YP_003312982.1| carbohydrate ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] gi|269095712|gb|ACZ20148.1| carbohydrate ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] Length = 329 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 74/196 (37%), Gaps = 63/196 (32%) Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 +WIG P Q L PAN FF +VV MI+ + + Sbjct: 178 VWIGLEPQ---------QFLLGAPANTFFLIVV-----------------MIWIQAGFSM 211 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT-------GAI------- 511 + A A P+D E A + G + +RYI +P I P + G + Sbjct: 212 TVLSAAIKAIPDDIVEAARLDGLQGLKMFRYITVPSIRPALIVVVTTIAMGTLKVFDIVR 271 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 T GG ++ S+V+ +R GLGA +A V+L +L++ Sbjct: 272 TMTGGNFDTSVVANEFYNQSFVIRNQGLGAALA----------VILFILVV--------- 312 Query: 572 FLWHPLYLYGTRCLRL 587 PL +Y R LR+ Sbjct: 313 ----PLVIYNVRQLRM 324 >gi|242278292|ref|YP_002990421.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio salexigens DSM 2638] gi|242121186|gb|ACS78882.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio salexigens DSM 2638] Length = 285 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 21/188 (11%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ ISLL A+S R+ ++ PILD MQ++P +L ++ F Sbjct: 103 GAVAISLLVGIPVGIWMARSDRVETIIKPILDAMQTMPSFVYLIPVMMLF---------- 152 Query: 134 AELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L + A+F + +++M + + + +P+D+ E +R+F + Q + + +P + P Sbjct: 153 -GLGKVPALFATIIYSMPPIIRLTNVGIREVPKDVIEAARAFGATPMQTLFKVQLPLARP 211 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 +V + + ++A M+VV ++I G+G + +AI D+ A L+++ Sbjct: 212 TIVVGINQTT------MMALAMVVVA-SMIGAKGLGMEVLVAINRIDIGMGFEAGLSIVF 264 Query: 251 VIFLYDQL 258 + + D+L Sbjct: 265 LAIIIDRL 272 >gi|7542432|gb|AAF63444.1|AF218267_1 glycine betaine/L-proline transport system permease protein [Pseudomonas putida] Length = 315 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 24/178 (13%) Query: 66 SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TTL + L+++ L L A+S R+ ++ P+LD MQ++P +L V+ F Sbjct: 96 SMTTLALVLTSVFFCALIGIPLGILCARSDRMERIIRPLLDAMQTLPAFVYLVPVVMLF- 154 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + +FA+ V + Q +P D E +R+F + Q + Sbjct: 155 --GIGNVPGVLVTIVFAL-PPLVRLTNLGIRQ----VPEDKIEAARAFGCTPRQMLTRVQ 207 Query: 185 VPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P + M GL +M+S+S VV + MI VG G+G + I D+ Sbjct: 208 LPLATSTIMAGLNQTLMLSLS----MVVIASMISVG-------GLGQMVLRGIGRLDM 254 >gi|84394016|ref|ZP_00992754.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio splendidus 12B01] gi|84375353|gb|EAP92262.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio splendidus 12B01] Length = 364 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S + PILD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 168 ARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 222 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P DL E SF S Q + + +P ++P G+ +M+S+S Sbjct: 223 TILGIQ---QVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 275 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 276 VVIASMIAVG-------GLGQMVLRGIGRLDM 300 >gi|323494633|ref|ZP_08099736.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio brasiliensis LMG 20546] gi|323311066|gb|EGA64227.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio brasiliensis LMG 20546] Length = 280 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +A+ L +L PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPIGIMASHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGMTKVPEELIEAGKAFGASRMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAAMPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275 >gi|218890352|ref|YP_002439216.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|218770575|emb|CAW26340.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 274 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV I S + + VG W+G + ++P Q L A P+ + PL++ Sbjct: 77 SLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDE 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + +L+ G + + ++AG + E+ + ++ + R I+LP P Sbjct: 137 -TPKI---VLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPN 192 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A +W + +E+ + T GLG +++ E S P++V+ +++ Sbjct: 193 LFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET-SRPDLVIAAILVLAA 245 Query: 566 VLALNRFLWHPLYLYGTRCLR 586 + L+ L L R LR Sbjct: 246 LGKLSDGLLRSLE---RRALR 263 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 17/206 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + I V T SRR L P +++IP L ++ +++F K Sbjct: 80 RVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPK 139 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ L A F ++ ++ + + R E+ R +RLS + + +P ++P Sbjct: 140 IVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALP 191 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 L + ++S W F+VA+E+I G+G ++ + ++ A+L + Sbjct: 192 NLFTGLRGALSLSWMFLVAAELIAATQ------GLGYLLSDGRETSRPDLVIAAILVLAA 245 Query: 251 VIFLYDQLLF---RPMIVWSNKFRLE 273 + L D LL R + W + F E Sbjct: 246 LGKLSDGLLRSLERRALRWRDSFDGE 271 >gi|146278349|ref|YP_001168508.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145556590|gb|ABP71203.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 278 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL V+ PILD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 119 AAHRPRLYQVMSPILDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 172 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T + + + P L+E + +F + Q+ W + +P++ P GL +M+S+S Sbjct: 173 RLT---HLGVSSTPLALKEAATAFGATPRQRLWKVELPWAFPQIMTGLNQTIMLSLS 226 >gi|254422997|ref|ZP_05036715.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335] gi|196190486|gb|EDX85450.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335] Length = 284 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 16/204 (7%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W+ +G + F+ + +++ ++ RV++ IAS + VG+ IG+ I + P Sbjct: 67 WEVLGATIEFFSSEPGVHL----RSSIVRVLLGFAIASALGTVVGMLIGWFQVIEDLLMP 122 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND-- 478 +LL PA + PL + + + G + +L + I +D Sbjct: 123 PLELLRPIPAVAWIPLAILIFPTAETG----MIYITFVGAFFPVLISTIRAVENILHDVV 178 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 V + W ++ I++PG P +G G AW + +E+ + + G Sbjct: 179 LIRVGQCLGASRWHIFKDIVIPGSLPGIASGLTIGMGNAWFCLVTAEILAGRY------G 232 Query: 539 LGAYIAESTEKGSFPEVVLGVLIM 562 +G ES ++P +V+G+L++ Sbjct: 233 VGYITWESYVTSNYPPIVMGMLLI 256 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 10/117 (8%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L+P L++++ IP + ++ ++ F AE I+ F + + S +++ Sbjct: 119 LLMPPLELLRPIPAVAWIPLAILIFPT--------AETGMIYITFVGAFFPVLISTIRAV 170 Query: 159 CNIPRD--LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 NI D L V + S W F + +P S+PG+ + + M WF +V +E++ Sbjct: 171 ENILHDVVLIRVGQCLGASRWHIFKDIVIPGSLPGIASGLTIGMGNAWFCLVTAEIL 227 >gi|262364301|gb|ACY60858.1| taurine transport system permease protein [Yersinia pestis D182038] Length = 171 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P+++I + +P L +L V++F IG E + I I+ + +T + + Sbjct: 10 VLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTLAAVAGV 61 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ +R+ S WQ W++ +P ++P ++ + + + GW +VA+E+I Sbjct: 62 RSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELI 116 >gi|170734839|ref|YP_001773953.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169820877|gb|ACA95458.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 285 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 25/164 (15%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456 VG +G I + +P Q L A P+ + P+++ LWL + L+ Sbjct: 103 VGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 151 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 G + + V+AG E+ + + + +R I+LP P VTG T Sbjct: 152 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 211 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 AW + +E+ + T GLG +++ E G P++V GV+ Sbjct: 212 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLVFGVI 248 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 9/172 (5%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P +I+D + + + + ++ +TLR+ + V SRR+ + P Sbjct: 62 APSEILDTL-ARMGITRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPT 120 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +++IP L ++ +++ K+ L AI A F ++ + ++ R Sbjct: 121 FQALRAIPSLAWVPVLLLWLGIDEAPKIT---LIAIGAFFPVH-----LAVVAGIRDVDR 172 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 L E+ +RL F + +P ++P +V + +S W F+VA+E+I Sbjct: 173 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 224 >gi|269216258|ref|ZP_06160112.1| ABC transporter, permease protein [Slackia exigua ATCC 700122] gi|269130517|gb|EEZ61595.1| ABC transporter, permease protein [Slackia exigua ATCC 700122] Length = 250 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 10/180 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RVV+ + +++ IP+G+ G P + + P L P V P+++ + Sbjct: 59 SLYRVVIAMFAGTVLAIPLGLVCGRSPRLDAVFAPVLYFLYPLPKVVLLPVLIVLMGLAD 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + L L IF + +L V A A P D E S +R++++P P Sbjct: 119 -APKIALIALTIF---FQVLVTVRDAAKAVPEDSIESVRSLGAGRLDVYRHVVVPATLPE 174 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 T + G A +E + +TGLG +I S +P + G++ M Sbjct: 175 LFTALRISSGTAVAILFFAESLAG------STGLGYFIVNSWALLDYPRMFAGIIAMAVL 228 >gi|91780997|ref|YP_556204.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693657|gb|ABE36854.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 279 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 19/206 (9%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R I I + +G+ +GF P + + Q++ A P PLV+ Sbjct: 81 VSLLRAAAGFAIGGTIGLALGVLVGFSPLAQALLDRSIQMVRAIPFLAMLPLVIVWFGVG 140 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++L ++F I N + G E+A + R IILPG P Sbjct: 141 EVAKIFLVALAVLFP----IYINTMLGIRQIDPKLMELAKVIGLDRTAVVRRIILPGAMP 196 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI--- 561 +TG A AW A +++E + T G+G ++ E +VL ++I Sbjct: 197 SILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLQTNVIVLTIVIYAF 250 Query: 562 MCCFVLALNRFL------WHPLYLYG 581 + AL R L WH Y G Sbjct: 251 IGVVADALVRLLEAHFLSWHANYAKG 276 >gi|73538635|ref|YP_299002.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gi|72121972|gb|AAZ64158.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 298 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKSR + V+ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLILGVPLGIWAAKSRVVAAVVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ V + + Q + ++ E +F + WQ + + P ++P Sbjct: 153 GILSTVIFAM-PPAVRLTSLGIRQ----VNMEIVEAGHAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNEVLASIQRLDI 246 >gi|259506319|ref|ZP_05749221.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] gi|259166099|gb|EEW50653.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] Length = 257 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/175 (20%), Positives = 80/175 (45%), Gaps = 14/175 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L +I+ + L + + L L P++ I++ + L +L + ++ Sbjct: 73 RVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAWLPIGLALLLD----- 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AE A+F I S +W + + ++ +I +++ + W + +P ++P Sbjct: 128 ---AERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLAISRVWLPATLP 184 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 G++ + +S+S W ++ +EM+V G GIG ++ D+ AI+ A+ Sbjct: 185 GIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDIDAIVVAI 233 >gi|257066039|ref|YP_003152295.1| binding-protein-dependent transport systems inner membrane component [Anaerococcus prevotii DSM 20548] gi|256797919|gb|ACV28574.1| binding-protein-dependent transport systems inner membrane component [Anaerococcus prevotii DSM 20548] Length = 342 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 20/207 (9%) Query: 68 TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 ++L++L + +I L + LA ++ + PIL ++ IP +L +V +NL Sbjct: 148 SSLKLLFTGYIIGGLLGIITGILAGYFEKVNYWIDPILKLLGPIPTTTWLPLVMVLAINL 207 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + G A+F I + +T + + N+ E +R+ + + +P Sbjct: 208 FQG--------AVFIIALGVWFQVTLATITGIRNVDPAFYEAARTLGATNKDMVRRIAIP 259 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +MP + ++ +MS ++ +EM+ V G+G YI D A +Y + Sbjct: 260 SAMPNIFQGLVSAMSAACNALIVAEMMGVES------GLGWYITWKSSWADYTA-MYGAI 312 Query: 247 TMLGVIFLYDQLLFRPM----IVWSNK 269 +L V F+ +L + + +VW N+ Sbjct: 313 ILLAVTFVIVNILIKKLSDRVLVWKNE 339 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 14/151 (9%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 II ++ I GI G+ ++ I P +LL P + PLV+ L NL+ Sbjct: 158 IIGGLLGIITGILAGYFEKVNYWIDPILKLLGPIPTTTWLPLVMV------LAINLFQGA 211 Query: 455 LMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 + I G + + I G F E A + T R I +P P G ++ Sbjct: 212 VFIIALGVWFQVTLATITGIRNVDPAFYEAARTLGATNKDMVRRIAIPSAMPNIFQGLVS 271 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 A A NA IV+E+ +GLG YI Sbjct: 272 AMSAACNALIVAEMMG------VESGLGWYI 296 >gi|218675844|ref|YP_002394663.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32] gi|218324112|emb|CAV25283.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32] Length = 280 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L VL PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + Sbjct: 151 FGLGIVPGLI----STIIFAI--AAPIRLT---YLGVTKVPEELIEAGKAFGASRMKLLM 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275 >gi|291519896|emb|CBK75117.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Butyrivibrio fibrisolvens 16/4] Length = 254 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 16/135 (11%) Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 N ++++S LM F I N++ G ++ E+A F I R R+I +P + PYY Sbjct: 122 NLSVFISFLMAFPV---IYTNILQGLTSMDKKMLEMAQVFRIPFKRRLRFIYVPEVIPYY 178 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE--------VVLG 558 A + G + A I +E+ I L +G + ++ + PE ++L Sbjct: 179 QAAAALSNGLCFKAGIAAEI-----IGLPQGSIGERLYQAKIYLNTPELFAWTIVIIILS 233 Query: 559 VLIMCCFVLALNRFL 573 ++ CF+ +N+ + Sbjct: 234 IVFNRCFLYLINQVM 248 >gi|147676572|ref|YP_001210787.1| ABC-type nitrate/sulfonate/bicarbonate transport systemM permease component [Pelotomaculum thermopropionicum SI] gi|146272669|dbj|BAF58418.1| ABC-type nitrate/sulfonate/bicarbonate transport systemM permease component [Pelotomaculum thermopropionicum SI] Length = 259 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 14/190 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ ISL L SR L L P+L +Q++P + +L +++F Sbjct: 68 RVVVGYSISLAVGLSLGLLIVSSRYLDETLSPLLLGLQTLPSICWLPLAILWFGL----- 122 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 E + IF I ++++T + N+P V+++ G + + + +P + P Sbjct: 123 ---GEDSIIFVIAIGSIFSVTMGTLSGIKNVPPIYMRVAKTMGAKGLKAYTTVVIPAAFP 179 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ M GW F A ++ G+ + P G+G + + D+ ++ M+ ++ Sbjct: 180 AIIGGMKQ----GWSF--AWRALMAGELLSPKDGLGYVLTIGRDLHDMNQVVGVMIIIII 233 Query: 251 VIFLYDQLLF 260 + + D+ +F Sbjct: 234 IGLIIDKFIF 243 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 6/166 (3%) Query: 364 IGYIVNHFT-YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 +G + N T +QD ++I +G +M RVVV I+ + + +G+ I ++ + P Sbjct: 43 VGVLQNLVTGFQDSTFLIAIGA-SMKRVVVGYSISLAVGLSLGLLIVSSRYLDETLSPLL 101 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 L P+ + PL + ++ L + + ++ I G+ + + ++G P + V Sbjct: 102 LGLQTLPSICWLPL---AILWFGLGEDSIIFVIAI-GSIFSVTMGTLSGIKNVPPIYMRV 157 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 A + G + + +++P FP + G AW A + E+ S Sbjct: 158 AKTMGAKGLKAYTTVVIPAAFPAIIGGMKQGWSFAWRALMAGELLS 203 >gi|254785247|ref|YP_003072675.1| nitrate transporter permease [Teredinibacter turnerae T7901] gi|237686520|gb|ACR13784.1| nitrate transporter, permease protein [Teredinibacter turnerae T7901] Length = 337 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/220 (20%), Positives = 86/220 (39%), Gaps = 22/220 (10%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L IW T+F + A+I+ +P+GI+ G ++ + P Q+ + P+ Sbjct: 126 LDQIWTSIKTVF---TGFLFATIVAVPLGIFCGLSSTFNAAMNPIIQIFKPVSPLAWLPI 182 Query: 437 VVSCVS-YYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 V VS Y W S + + + W L N G ++ D V + Sbjct: 183 VTMVVSATYVTTDEAWFSKSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVGKVLQL 242 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + +++P P TG + G W I +E+ + + GLG ++ + + Sbjct: 243 GWFTKVTKLVIPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQ 296 Query: 549 KG---SFPEVVLGVLIMCCFVLALNR--FLWHPLYLYGTR 583 G S +++ VL + L+R F L+ +G + Sbjct: 297 NGSSNSLGRIMVAVLTIGIIGFLLDRIMFTLQNLFTFGDK 336 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 9/117 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + + +I +DL V + +L + K L +P S+P + + +S+ GW Sbjct: 215 LWPTLINTALGVASIDKDLMNVGKVLQLGWFTKVTKLVIPSSLPLIFTGLRLSLGVGWMV 274 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQLLF 260 ++A+EM+ PG+G ++ + L I+ A+LT+ + FL D+++F Sbjct: 275 LIAAEMLAQN------PGLGKFVWDEFQNGSSNSLGRIMVAVLTIGIIGFLLDRIMF 325 >gi|126730357|ref|ZP_01746168.1| binding-protein-dependent transport systems inner membrane component [Sagittula stellata E-37] gi|126709090|gb|EBA08145.1| binding-protein-dependent transport systems inner membrane component [Sagittula stellata E-37] Length = 421 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV++ +++ IP+G +G P + + P PLV+ Sbjct: 230 SLFRVILGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L +L+ W + AG S A S + W+ R++I+P P Sbjct: 290 LGK----IILLFLAALWIMAIAARAGVSGVAISKVHAAYSLGASKWQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++ IG EL I +F + +W M + + + Sbjct: 264 PIVEFMRPVPPLALIPLVIIW-------AGIG-ELGKIILLFLAALWIMAIAARAGVSGV 315 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + S S WQ ++ VP S+P + ++M W VVA+E++ Sbjct: 316 AISKVHAAYSLGASKWQIMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELV 367 >gi|89096764|ref|ZP_01169656.1| glycine betaine ABC transporter (permease) [Bacillus sp. NRRL B-14911] gi|89088779|gb|EAR67888.1| glycine betaine ABC transporter (permease) [Bacillus sp. NRRL B-14911] Length = 277 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 75/148 (50%), Gaps = 23/148 (15%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150 +S R +L PILD MQ++P +L +++F + + PG I S +++M Sbjct: 117 QSDRAQSILTPILDFMQTMPAFVYLIPAIIFFGIGVVPG------------IIASVIFSM 164 Query: 151 TFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 ++ + + +P DL E S +F + QK + + +P +M ++ + S+ + Sbjct: 165 PPTIRLTNLGIRQVPEDLVEASDAFGSTPSQKLFKVQLPLAMNTIMAGINQSI------M 218 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKE 235 +A M+V+ +++ PG+G+ + A+ + Sbjct: 219 LALSMVVIA-SLVGAPGLGADVYRAVTQ 245 >gi|126461621|ref|YP_001042735.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|126103285|gb|ABN75963.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] Length = 284 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL + P+LD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 125 AAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 178 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T + + + P L+E + +F + Q+ W + +P++ P GL +M+S+S Sbjct: 179 RLT---HLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232 >gi|307324086|ref|ZP_07603295.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] gi|306890535|gb|EFN21512.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] Length = 269 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 34/274 (12%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYAS 66 P R + P +F L+A VL + I + T + DI P+++ + A Sbjct: 17 PRGARRTVHPLVFHLIALVLGVAIWAL--------TAAAGLADIPGPLSVSSRARELLAD 68 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGM--------VLVPILDIMQSIPILGFLTF 118 T + A + +L F TL A M +L P + ++IP L + Sbjct: 69 GTLTQDALASLQRVLLGFALGTLVAVPVGFLMGWYPVARGLLEPYVQFFRTIPPLALIPL 128 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +V M + E IF IF + + + +Q + + R L + +R S Sbjct: 129 VIV-LMGI-------GETPKIFVIFLAAFMSCVVAAFQGVTGVDRTLIDAARVLGASDRT 180 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P S P ++ M + + W VVA+EMI G+G + A D+ Sbjct: 181 VFLKVVIPASTPFILVGMRIGLGAAWATVVAAEMIGAQK------GLGFEMVHAQTYYDV 234 Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269 I ++++ + + D+LL R + W + Sbjct: 235 PTIFVGLISIGVIGLVMDRLLLVAERRLTAWQER 268 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/188 (19%), Positives = 76/188 (40%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + +++ +PVG +G+ P ++P+ Q P PLV+ + Sbjct: 78 SLQRVLLGFALGTLVAVPVGFLMGWYPVARGLLEPYVQFFRTIPPLALIPLVIVLMGIGE 137 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P +++ L F + F + G D V + T + +++P P+ Sbjct: 138 -TPKIFVIFLAAFMSCVVAAFQGVTGVDRTLIDAARVLGASDRT---VFLKVVIPASTPF 193 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G G AW + +E+ GLG + + P + +G++ + Sbjct: 194 ILVGMRIGLGAAWATVVAAEMIGA------QKGLGFEMVHAQTYYDVPTIFVGLISIGVI 247 Query: 566 VLALNRFL 573 L ++R L Sbjct: 248 GLVMDRLL 255 >gi|256848544|ref|ZP_05553985.1| phosphate ABC transporter, permease PstC [Lactobacillus coleohominis 101-4-CHN] gi|256714596|gb|EEU29576.1| phosphate ABC transporter, permease PstC [Lactobacillus coleohominis 101-4-CHN] Length = 301 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Query: 102 PILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 PI++++ IP + G++ TVV + ++ G G LAAI +F + MT S Sbjct: 119 PIVELLVGIPSVVYGYVGLTVVIPFLQKMFGGTGFGI-LAAIVVLFLMVLPTMTSMTIDS 177 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P+ S + WQ + +P + G++ M+ M+ + +A +M++ Sbjct: 178 LNAVPKSYRMASAGLGATRWQTISRIILPSAKGGILTAMIFGMARAFGEALAVQMVIGNT 237 Query: 218 TVIP 221 TVIP Sbjct: 238 TVIP 241 >gi|77462729|ref|YP_352233.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77387147|gb|ABA78332.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 284 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL + P+LD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 125 AAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 178 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T + + + P L+E + +F + Q+ W + +P++ P GL +M+S+S Sbjct: 179 RLT---HLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232 >gi|86144740|ref|ZP_01063072.1| putative permease of ABC transporter [Vibrio sp. MED222] gi|85837639|gb|EAQ55751.1| putative permease of ABC transporter [Vibrio sp. MED222] Length = 280 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L VL PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + Sbjct: 151 FGLGIVPGLI----STIIFAI--AAPIRLT---YLGVTKVPEELIEAGKAFGASRMKLLM 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275 >gi|302337418|ref|YP_003802624.1| binding-protein-dependent transporters inner membrane component [Spirochaeta smaragdinae DSM 11293] gi|301634603|gb|ADK80030.1| binding-protein-dependent transport systems inner membrane component [Spirochaeta smaragdinae DSM 11293] Length = 284 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 4/124 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ VV +I+A +I +PVGIW + + ++P + PA V+ + V ++ Sbjct: 96 TLSLVVTSVILALLIAVPVGIWSSKKDTVQRIVRPVLDFMQTLPAFVYL---IPAVLFFK 152 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L P + +IF + + G P + KE A SF T + LP P Sbjct: 153 LGPVPGVIATLIFAMPPSVRLTNL-GIRQVPKEIKEAAKSFGATSHQMLLKAELPVALPT 211 Query: 506 YVTG 509 + G Sbjct: 212 ILAG 215 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 22/157 (14%) Query: 69 TLRMLSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T+ LS +V S++ + A ++K + ++ P+LD MQ++P +L V++F Sbjct: 93 TMETLSLVVTSVILALLIAVPVGIWSSKKDTVQRIVRPVLDFMQTLPAFVYLIPAVLFF- 151 Query: 125 NLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 G V G IFA+ S ++ N+ + +P++++E ++SF + Q Sbjct: 152 --KLGPVPGVIATLIFAMPPSVRLTNL------GIRQVPKEIKEAAKSFGATSHQMLLKA 203 Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 +P ++P G+ +M+++S VV + MI G Sbjct: 204 ELPVALPTILAGVNQTIMLALS----MVVIAGMIGAG 236 >gi|158522774|ref|YP_001530644.1| binding-protein-dependent transport systems inner membrane component [Desulfococcus oleovorans Hxd3] gi|158511600|gb|ABW68567.1| binding-protein-dependent transport systems inner membrane component [Desulfococcus oleovorans Hxd3] Length = 278 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 22/144 (15%) Query: 69 TLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T+ ++ +VI++LF L+A S+ ++ PILD+MQ++P +L + +F Sbjct: 88 TVSTMALIVIAVLFAIAIGVPLGILSALSQTAYRIITPILDVMQTMPAFVYLIPAIPFF- 146 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFW 181 L A+ AIF++ ++++ + + + +PR+L E + +F S QK + Sbjct: 147 ----------GLGAVGAIFSTVIFSVPPCIRLTCLGIKQVPRELVEAADAFGSSRGQKLF 196 Query: 182 YLGVPFS----MPGLVWNMMMSMS 201 + +P + M G+ +M+++S Sbjct: 197 KVQLPIAKTTMMAGINQTIMLALS 220 >gi|150397506|ref|YP_001327973.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150029021|gb|ABR61138.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 281 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T +L+A +S+ AA+ + + PILD+MQ+IP +L ++ Sbjct: 91 QETTETLALVLAATFVSMAVGVPLGIAAARRAWIYSFMRPILDLMQTIPTFVYLIPALIL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A I +++ + + P L E + SF + WQ Sbjct: 151 FGLGMVPGLIATVIFAIPAPIRLTRL---------GIISTPPALVEAAESFGATPWQVLR 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +PF+MP GL +M+S+S Sbjct: 202 KVELPFAMPQIMAGLTQTIMLSLS 225 >gi|148257687|ref|YP_001242272.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409860|gb|ABQ38366.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 258 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV ++AS+I +P+G+ +G I + ++PF PA+ F PL++ Sbjct: 67 MTVWRVVGGFVLASVIAVPLGLLMGAYKPIEAFLEPFVSFARYLPASAFIPLLILWAGIG 126 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L LL+IF G+ + I+ + D E A + + ++LP Sbjct: 127 ELQ-----KLLIIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIGRVLLPSAA 181 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 182 PDIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 218 >gi|327459831|gb|EGF06171.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis SK1057] Length = 305 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSGKEFGALPMVLGSFIVTILSALIATPFAIGAAVFMTEVSPKGARILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ +V + ++ G G L+ IF +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQIVVPFVRTVFGGTGFGI-LSGIFVLFVMILPTVTFMTTDSLRAVPRHYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|312136841|ref|YP_004004178.1| binding-protein-dependent transport systems inner membrane component [Methanothermus fervidus DSM 2088] gi|311224560|gb|ADP77416.1| binding-protein-dependent transport systems inner membrane component [Methanothermus fervidus DSM 2088] Length = 250 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 12/162 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ RVV+ +IAS I IP+GI IG+ I + P Q+L P PL + Sbjct: 58 TLMRVVLGFLIASAIAIPLGIGIGWSETIENIFNPLIQILRPIP-----PLAWVPFALIW 112 Query: 446 LNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L + +IF G+ + IL N + F E A + ++LPG P Sbjct: 113 FGIGLKSEVFIIFIGSFFPILLNTVDAVKGVEKVFIESAYVLGANEQQILTKVVLPGSLP 172 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 V G G + ++ +E+ + +GLG I +S Sbjct: 173 GIVLGMRVGFGIGFMCTVAAEMIA------AKSGLGYLIMDS 208 >gi|296129229|ref|YP_003636479.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas flavigena DSM 20109] gi|296021044|gb|ADG74280.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas flavigena DSM 20109] Length = 288 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/123 (21%), Positives = 61/123 (49%), Gaps = 8/123 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR ++L P L ++++P L ++ +++ K+ + A F ++T+ Sbjct: 124 SRAGDVLLAPTLAAIRAVPSLAWVPLLILWMKIGEESKITLVAIGAFFPVYTT------- 176 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + +L ++ L E R+F L G + F + +P +P ++ + + ++ W F+VA+E+ Sbjct: 177 -VAAALRHVDPHLVEAGRAFGLRGVELFRSVQLPAVIPSVMSGLRLGLAQAWLFLVAAEL 235 Query: 213 IVV 215 I Sbjct: 236 IAA 238 >gi|218709173|ref|YP_002416794.1| glycine betaine/L-proline transport system permease ProW [Vibrio splendidus LGP32] gi|218322192|emb|CAV18306.1| Glycine betaine/L-proline transport system permease protein proW [Vibrio splendidus LGP32] Length = 364 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S + PILD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 168 ARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 222 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P DL E SF S Q + + +P ++P G+ +M+S+S Sbjct: 223 TILGIQ---QVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 275 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 276 VVIASMIAVG-------GLGQMVLRGIGRLDM 300 >gi|163758586|ref|ZP_02165673.1| ABC transporter permease [Hoeflea phototrophica DFL-43] gi|162283876|gb|EDQ34160.1| ABC transporter permease [Hoeflea phototrophica DFL-43] Length = 284 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 12/149 (8%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 +I+N +++ + T+ V+ ++ I +P+GIW+ RP + + IQP L+ Sbjct: 87 FIINQDLWKETVE-------TLVLVISAAFMSMAIGVPIGIWLAHRPKLYAYIQPILDLM 139 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P V+ + V + L P L +++ IF + I + G ++ P E + Sbjct: 140 QTMPTFVYL-IPVLILFGLGLAPGLLVTI--IFASPAPIRLTYL-GITSVPKPMIEAGQA 195 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITAC 514 F + + R + LP P + G +T C Sbjct: 196 FGASPGQLLRKVELPAALPTIMAG-LTQC 223 >gi|118500403|gb|ABK97401.1| MsmH [uncultured bacterium Sargasso-2222818] Length = 272 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV I+A II IP G+ + + P ++L P + P + + Sbjct: 78 RVFAGFIMAQIIGIPFGLALAVNRYFKDIFFPPFEILRPIPPLAWVPASI----VFWPTT 133 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + ++ + G + I+ NV+ GA + + A S T W + IILPG P T Sbjct: 134 EMSIAFVTFLGAFFTIVINVLGGAKSIDIRYLRAAQSMGATQWHLFTKIILPGTLPSIFT 193 Query: 509 GAITACGGAWNASIVSEV 526 GA G W + E+ Sbjct: 194 GAAVGMGITWEVVLAGEM 211 >gi|83943670|ref|ZP_00956128.1| hypothetical taurine ABC transporter, permease protein [Sulfitobacter sp. EE-36] gi|83954653|ref|ZP_00963364.1| hypothetical taurine ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83840937|gb|EAP80108.1| hypothetical taurine ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83845350|gb|EAP83229.1| hypothetical taurine ABC transporter, permease protein [Sulfitobacter sp. EE-36] Length = 242 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 18/155 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 LVP++ + IP + L V++F G G++ A I F FT V + Y ++ Sbjct: 85 LVPLVAALFPIPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYAAV 135 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS W + +P +MPG++ + +S++ +VA+EM+ G Sbjct: 136 DNVDRGLIRMGQSFGLSWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAE 193 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGV 251 GIG+YI A DL + +L++LGV Sbjct: 194 Y----GIGAYILEAGSLYDLERLFAGVVILSVLGV 224 >gi|15598644|ref|NP_252138.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107102982|ref|ZP_01366900.1| hypothetical protein PaerPA_01004051 [Pseudomonas aeruginosa PACS2] gi|254236402|ref|ZP_04929725.1| hypothetical protein PACG_02382 [Pseudomonas aeruginosa C3719] gi|254242134|ref|ZP_04935456.1| hypothetical protein PA2G_02863 [Pseudomonas aeruginosa 2192] gi|9949589|gb|AAG06836.1|AE004765_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126168333|gb|EAZ53844.1| hypothetical protein PACG_02382 [Pseudomonas aeruginosa C3719] gi|126195512|gb|EAZ59575.1| hypothetical protein PA2G_02863 [Pseudomonas aeruginosa 2192] Length = 274 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV I S + + VG W+G + ++P Q L A P+ + PL++ Sbjct: 77 SLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDE 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + +L+ G + + ++AG + E+ + ++ + R I+LP P Sbjct: 137 -TPKI---VLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPN 192 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A +W + +E+ + T GLG +++ E S P++V+ +++ Sbjct: 193 LFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET-SRPDLVIAAILVLAA 245 Query: 566 VLALNRFLWHPLYLYGTRCLR 586 + L+ L L R LR Sbjct: 246 LGKLSDGLLRSLE---RRALR 263 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 17/206 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + I V T SRR L P +++IP L ++ +++F K Sbjct: 80 RVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPK 139 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ L A F ++ ++ + + R E+ R +RLS + + +P ++P Sbjct: 140 IVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALP 191 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 L + ++S W F+VA+E+I G+G ++ + ++ A+L + Sbjct: 192 NLFTGLRGALSLSWMFLVAAELIAATQ------GLGYLLSDGRETSRPDLVIAAILVLAA 245 Query: 251 VIFLYDQLLF---RPMIVWSNKFRLE 273 + L D LL R + W + F E Sbjct: 246 LGKLSDGLLRSLERRALRWRDSFDGE 271 >gi|226314292|ref|YP_002774188.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097242|dbj|BAH45684.1| probable ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 275 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 F M Q+ NIP+D EE ++ + +Q +W + +P P L + + G W ++A Sbjct: 155 FLMRQAFLNIPKDYEEAAKLDGCNPFQIYWRVFLPMCKPSLATLAVFTFMGKWNEILAPV 214 Query: 212 MIVVGDTVIPLP-GIGSYIALAIKEQDLLAILYAMLTMLG--VIFLYDQLLF 260 + ++ D LP GI S ++ K +D L + A+++++ ++FL+ + F Sbjct: 215 IYLISDENFTLPIGILS-LSGQYKTEDQLLVAGALISLIPILIVFLFAEKYF 265 >gi|253990652|ref|YP_003042008.1| glycine betaine transporter membrane protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782102|emb|CAQ85266.1| glycine betaine/l-proline transport system permease protein prow [Photorhabdus asymbiotica] Length = 361 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 176 SRSERAAKIIRPMLDAMQTTPAFVYLVPIVMLF---GIGNVPGVIVTIIFAL--PPIVRL 230 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 231 TI---LGIKQVPTDLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 283 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 284 VVIASMIAVG-------GLGQMVLRGIGRLDM 308 >gi|313624276|gb|EFR94323.1| glycine betaine transport system permease protein opuAB [Listeria innocua FSL J1-023] Length = 282 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVIGVPLGIWMAKSGIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + +L E + SF + WQK W + Sbjct: 154 GMVPGVVA----SVIFAMPPTVRMTNL------GIRQVSTELVEAADSFGSTPWQKLWKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|85704303|ref|ZP_01035406.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Roseovarius sp. 217] gi|85671623|gb|EAQ26481.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Roseovarius sp. 217] Length = 278 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 87/175 (49%), Gaps = 25/175 (14%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL + P+LD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 118 AAHRPRLYDGMRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLI-----ATVIFVVPAPI- 171 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 +T + + N P+ L E +++F + Q W + +P+++P GL +M+S+S Sbjct: 172 RLT---HLGISNTPQPLLEAAQAFGATNSQTLWKVELPYALPQIMAGLNQTIMLSLS--- 225 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 M+V+G ++ G+G + AI ++ + L ++ V + D++L Sbjct: 226 -------MVVIG-ALVGADGLGVPVLRAINTVNIALGFESGLMIVVVAIVLDRML 272 >gi|325521967|gb|EGD00659.1| choline ABC transporter, permease protein [Burkholderia sp. TJI49] Length = 298 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + V+ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAAVVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|325964252|ref|YP_004242158.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Arthrobacter phenanthrenivorans Sphe3] gi|323470339|gb|ADX74024.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Arthrobacter phenanthrenivorans Sphe3] Length = 257 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 10/153 (6%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P + A P V P+++ + + ++ ++++ I G W +L N I G A Sbjct: 91 LEPTLEFFRAIPPPVLVPVLMLLMG---ITDSMKVTVI-ISGCIWPVLLNTIEGVRAVDP 146 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + A ++ I+GW RY++LP P + G + ++SE+ + ++ Sbjct: 147 VLSDSAHTYGISGWARIRYLVLPSASPQIMAGVRQSLSLGLILMVISEMFA------SSS 200 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 GLG I + + PE+ G++++ +A++ Sbjct: 201 GLGFTIVQFQRSFAIPEMWSGIVVLGLLGVAMS 233 >gi|260777812|ref|ZP_05886705.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio coralliilyticus ATCC BAA-450] gi|260605825|gb|EEX32110.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio coralliilyticus ATCC BAA-450] Length = 280 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPVGVMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELIEAGQAFGASKMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAALPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKSP 275 >gi|163857217|ref|YP_001631515.1| taurine ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163260945|emb|CAP43247.1| taurine ABC transporter, permease protein [Bordetella petrii] Length = 238 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 29/177 (16%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ +++P + + +VYF IG E A I +F + + MY+ + I Sbjct: 80 PVINFFRALPPIALIPLVIVYFG-------IG-ESAKIAILFYASFFAGVIVMYEGIAQI 131 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 VSR+ S + F + VP ++P ++ + +++ W +VASE+I Sbjct: 132 NPIYVRVSRTLGASDGEIFRKVIVPLTIPHMLTALRVALGVAWATLVASELIAAQQ---- 187 Query: 222 LPGIGSYIALAIKEQDL-----LAILYAMLTMLGVIFLYDQLLFRP----MIVWSNK 269 G+G+ I QD L I+Y + +G+I L L+ R ++ W + Sbjct: 188 --GLGALI------QDASSFFQLDIIYVGIICIGLIALVMDLILRAAARRLVAWQER 236 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 34/172 (19%), Positives = 74/172 (43%), Gaps = 10/172 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +PVG +G+ + S + P A P PLV + Y+ + + +++L + + Sbjct: 62 VPVGFVLGWYKSVRSFVDPVINFFRALPPIALIPLV---IVYFGIGESAKIAILF-YASF 117 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + + + G + + V+ + + +R +I+P P+ +T A G AW Sbjct: 118 FAGVIVMYEGIAQINPIYVRVSRTLGASDGEIFRKVIVPLTIPHMLTALRVALGVAWATL 177 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + SE+ + GLGA I +++ + +G++ + L ++ L Sbjct: 178 VASELIA------AQQGLGALIQDASSFFQLDIIYVGIICIGLIALVMDLIL 223 >gi|170742926|ref|YP_001771581.1| nitrate ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168197200|gb|ACA19147.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 279 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 6/126 (4%) Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 L+AIF IF +W M + + R+ V+R+ + ++ + + +P + P ++ Sbjct: 151 LSAIFVIFICSLWPMLINTAFGVAGTRREWLNVARTLEVGPLRRAFTVILPAAAPTILTG 210 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 M +S+ W +VA+EM+V G GIG ++ + ++ ++L + V + Sbjct: 211 MRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGMVL 264 Query: 256 DQLLFR 261 DQLL R Sbjct: 265 DQLLAR 270 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 12/170 (7%) Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWY 463 G IG P +S + PF Q+L + PL + + L+ ++ +IF + W Sbjct: 110 GFLIGMSPLMSRALDPFIQVLKPVSPLAWMPLALYTIKDSGLS-----AIFVIFICSLWP 164 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 +L N G + ++ VA + + R +ILP P +TG + G AW + Sbjct: 165 MLINTAFGVAGTRREWLNVARTLEVGPLRRAFTVILPAAAPTILTGMRISIGIAWLVIVA 224 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +E+ G TG+G ++ S V+ +L++ + L++ L Sbjct: 225 AEMLVGG------TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLL 268 >gi|150401416|ref|YP_001325182.1| binding-protein-dependent transport systems inner membrane component [Methanococcus aeolicus Nankai-3] gi|150014119|gb|ABR56570.1| binding-protein-dependent transport systems inner membrane component [Methanococcus aeolicus Nankai-3] Length = 254 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 9/191 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RVV +IA ++ +P+GI +G+ I +LL P + PL ++++ Sbjct: 60 ISIKRVVSGFLIAGLVAVPIGISMGYFSTIRDFFDAGIELLRPIPPLAWVPL---ALAWF 116 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L ++ I G + IL N IAG P + A + II+P P Sbjct: 117 GIGETSMLFIIFI-GAFFPILINTIAGVKGVPTILIDSAQTLGAKQKDILLKIIIPASSP 175 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG G AW + +E+ GLG I + VV ++I+ Sbjct: 176 SILTGLRIGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYMLSRMDIVVASMIIIGL 230 Query: 565 FVLALNRFLWH 575 L L++ L + Sbjct: 231 IGLTLDKVLRY 241 >gi|125717254|ref|YP_001034387.1| glycine/betaine ABC transporter permease [Streptococcus sanguinis SK36] gi|125497171|gb|ABN43837.1| ABC transporter, glycine-betaine/proline permease protein, putative [Streptococcus sanguinis SK36] Length = 574 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ V+ P+LD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 119 AKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ I +L E S SF +G QK + + +P + + G+ +M+++S Sbjct: 176 L------AIRQISTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALS---- 225 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G + A++ D+ Sbjct: 226 -------MVVTASMIGAPGLGRGVLSALQHADI 251 >gi|254455337|ref|ZP_05068766.1| ABC transporter, membrane spanning protein (glycine betaine) [Candidatus Pelagibacter sp. HTCC7211] gi|207082339|gb|EDZ59765.1| ABC transporter, membrane spanning protein (glycine betaine) [Candidatus Pelagibacter sp. HTCC7211] Length = 295 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 27/192 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L +KS R ++P+LD+MQ+IP +L + M L GKV G I+A+ V Sbjct: 124 LMSKSSRAERTILPVLDMMQTIPSFVYL---IPIIMLLGIGKVPGLLAVCIYAL--PPVV 178 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 +T + + ++ E + +F + QK + +P S+P G+ +MM+++ Sbjct: 179 RLT---NLGIREVDKETLEAAEAFGATPMQKLRSVQIPLSLPTIFAGINQTIMMALA--- 232 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 M+V+ ++I + G+G I AI Q L L L ++ + ++D++ Sbjct: 233 -------MVVIA-SMIGVRGLGVPILQAISNQYLALGLMNGLAIVALAIIFDRVTQE--- 281 Query: 265 VWSNKFRLERTT 276 + N+ + R T Sbjct: 282 -YGNRIQRHRGT 292 >gi|332557611|ref|ZP_08411933.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides WS8N] gi|332275323|gb|EGJ20638.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides WS8N] Length = 284 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL + P+LD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 125 AAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 178 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T + + + P L+E + +F + Q+ W + +P++ P GL +M+S+S Sbjct: 179 RLT---HLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 232 >gi|300767567|ref|ZP_07077477.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494552|gb|EFK29710.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 309 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 5/132 (3%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149 RR +L P+ +++ IP + GF+ VV + N + G G L+ F +F + Sbjct: 117 RRGAKILRPVTELLVGIPSVVYGFIGLQVVVPFVRNTFGGSGYGI-LSGTFVLFVMILPT 175 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T +L ++PR E S + + WQ + + + ++PG++ ++ M+ + +A Sbjct: 176 VTSMTADALNSVPRYYREASLALGATRWQTIYKVVLRAAIPGMLTAVVFGMARAFGEALA 235 Query: 210 SEMIVVGDTVIP 221 +M++ T++P Sbjct: 236 VQMVIGNATLLP 247 >gi|209520913|ref|ZP_03269652.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209498637|gb|EDZ98753.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 282 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 33/178 (18%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475 Q++ PA PLV+ LW + L+ G + + N G + Sbjct: 122 QMIRNIPALAMIPLVI-----------LWFGIEESAKVFLVALGVFFPVYVNTFHGIRSV 170 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E+A S+ + G+ +R++ILPG P + G A G W IV+E S Sbjct: 171 DLNLIEMARSYGVKGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETIS------A 224 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLI---------MCCFVLALNRFLWHPLYLYGTRC 584 +G+G + E VV+G+L+ M L WHP Y G + Sbjct: 225 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKLADMLAKSLERVSLRWHPAYQRGAQA 282 >gi|197294983|ref|YP_002153524.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944462|emb|CAR57064.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 238 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 10/145 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR--RLGMVLVPILDIMQSIPILGFL 116 L YA + L ++ +M +++ L ++ R R + + +I +IP L L Sbjct: 36 DDLAYYAGQHMLLVVYSMTLAIAVGVPAGVLLSRPRFQRQAERFMQVFNIGNTIPSLAVL 95 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + F IG + AI A+F + + +T + Y+ + N+P L E ++ ++G Sbjct: 96 AIALGIFG-------IG-NVPAIVALFLASLLPVTRNAYEGMKNVPAALREAAKGIGMTG 147 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMS 201 WQ + +P ++P +V + +++ Sbjct: 148 WQSLVRVELPNALPIIVGGVRTALA 172 >gi|119720452|ref|YP_920947.1| binding-protein-dependent transport systems inner membrane component [Thermofilum pendens Hrk 5] gi|119525572|gb|ABL78944.1| binding-protein-dependent transport systems inner membrane component [Thermofilum pendens Hrk 5] Length = 270 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 32/63 (50%) Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +IPRDLEE F LS Q F + P ++PGL M + W V AS ++ + + Sbjct: 156 VSIPRDLEEAGLVFGLSRVQVFTKITAPLALPGLSAAAMFTFVTSWNEVFASTILTLKER 215 Query: 219 VIP 221 +P Sbjct: 216 TLP 218 >gi|78066175|ref|YP_368944.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Burkholderia sp. 383] gi|77966920|gb|ABB08300.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 270 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G + Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGAKA 270 >gi|115351517|ref|YP_773356.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|170698693|ref|ZP_02889759.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] gi|115281505|gb|ABI87022.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|170136397|gb|EDT04659.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] Length = 270 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA----LNRFLWHPLYLYGTRC 584 + E VV+G+L+ VLA WHP Y G + Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERTTLRWHPAYQSGAKA 270 >gi|288555637|ref|YP_003427572.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus pseudofirmus OF4] gi|288546797|gb|ADC50680.1| ABC permease nitrate/sulfonate/bicarbonate [Bacillus pseudofirmus OF4] Length = 246 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 8/129 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++ +VIS + A + + L P+L I Q+IPI+ V++F KV Sbjct: 61 VITGLVISTILGVTVAICMHRCPVIERALYPLLVISQTIPIIALAPIFVLWFGYSVWSKV 120 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + L F I T +MY L + P++L+E+ ++ S + F L VP S+P Sbjct: 121 VVTVLITFFPI--------TVNMYDGLKSTPKELKELFQTMNASPFATFMKLYVPHSLPS 172 Query: 192 LVWNMMMSM 200 + M +++ Sbjct: 173 FLSGMKVAV 181 >gi|163801661|ref|ZP_02195559.1| putative permease of ABC transporter [Vibrio sp. AND4] gi|159174578|gb|EDP59380.1| putative permease of ABC transporter [Vibrio sp. AND4] Length = 293 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 104 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 163 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 164 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELIEAGKAFGASRMKLLF 214 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 215 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 267 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 268 FEAGLAIVLVAIILDRLCKAP 288 >gi|146310501|ref|YP_001175575.1| taurine transporter subunit [Enterobacter sp. 638] gi|145317377|gb|ABP59524.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] Length = 275 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 10/169 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVGI +G P + + P +L P + PL+V + + L L IF Sbjct: 99 IPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 156 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + + +AG + A S + + ++ILPG P +TG G W+ Sbjct: 157 --VAMSAVAGVKSAQQVRLRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTL 214 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ + T GLG + + E + V+ G++++ L Sbjct: 215 VAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIMVIAVIAFGLE 257 >gi|28872433|ref|NP_795052.1| taurine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855688|gb|AAO58747.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 285 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 11/206 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G+++ Y D LG ++ R+ + + A++ IPVGI IG P + Sbjct: 73 GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEF 131 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL+V + L L L IF I AG A Sbjct: 132 YRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATAAGVRTVDPARVRAAQ 187 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S T W+ R++I+P P +TG G W+ + +E+ + T+GLG + Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQ 241 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 + + VVLG+L++ A+ Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267 >gi|78045723|ref|YP_361898.1| ABC transporter permease and substrate-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034153|emb|CAJ21798.1| ABC transporter permease and substrate-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 490 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 374 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + L +IPR+L + + + L W + W + +P + +V + + Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 419 >gi|297204810|ref|ZP_06922207.1| ABC transporter permease [Streptomyces sviceus ATCC 29083] gi|197712524|gb|EDY56558.1| ABC transporter permease [Streptomyces sviceus ATCC 29083] Length = 322 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 14/121 (11%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI--FTSQVWNMTFSMYQSLC 159 P+ ++++ LGF TF V + PG LA +F I F + MY +L Sbjct: 162 PVTSLLET---LGFHTFGEV----IAPGN-----LAVLFTIIAFWTGAGGWIVVMYGALN 209 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D+ E +R +GWQ W + +P +V+ ++++ +GG V +++ + T Sbjct: 210 NIPKDVMEAARIDGANGWQTAWRVQIPMLRKWIVYMVILAFAGGAQLFVEPQLLSLASTG 269 Query: 220 I 220 + Sbjct: 270 V 270 >gi|149201736|ref|ZP_01878710.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Roseovarius sp. TM1035] gi|149144784|gb|EDM32813.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Roseovarius sp. TM1035] Length = 278 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 87/175 (49%), Gaps = 25/175 (14%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL + P+LD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 118 AAHRPRLYDGMRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLI-----ATVIFVVPAPI- 171 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 +T + + N P+ L E +++F + Q W + +P+++P GL +M+S+S Sbjct: 172 RLT---HLGISNTPQPLLEAAQAFGATNRQTLWKVELPYALPQIMAGLNQTIMLSLS--- 225 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 M+V+G ++ G+G + AI ++ + L ++ V + D++L Sbjct: 226 -------MVVIG-ALVGADGLGVPVLRAINTVNIALGFESGLMIVVVAIVLDRML 272 >gi|23100910|ref|NP_694377.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22779144|dbj|BAC15411.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 286 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 25/146 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQV 147 L +KS+ + PILD MQ++P +L V +F G V G + IFA T + Sbjct: 123 LMSKSKIANTIFTPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASLIFATPPTVRF 179 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 N+ + + +DL E S SF +G QK + + +P + M G+ +M+++S Sbjct: 180 TNL------GIRQVSKDLVEASDSFGSTGTQKLFKVELPMARSTIMAGINQTVMLALS-- 231 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYI 229 M+V+ ++I PG+GS + Sbjct: 232 --------MVVIA-SMIGAPGLGSQV 248 >gi|302522618|ref|ZP_07274960.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78] gi|302431513|gb|EFL03329.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78] Length = 303 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 14/223 (6%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G + + +T +L IW ++ R + ++A +I P+G+ + + + I P Sbjct: 86 GELSDAWTRGKLLGYIW---TSVSRGLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSG 142 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ + P V + LN ++ +++++ G I +++G P + Sbjct: 143 LQSLPSVAWVP---PAVLWLGLNSSMMYAVILL-GAVPSIANGLVSGVDQVPPLYLRAGR 198 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543 + TG R +I+LP P Y+ G +W + + +E +AS + + GLG + Sbjct: 199 TLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI---GLGQLL 255 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 S V L + ++ +A++ ++ PL R LR Sbjct: 256 ENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLE---RRVLR 295 >gi|167033694|ref|YP_001668925.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166860182|gb|ABY98589.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 317 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 25/173 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S RL ++ P+LD MQ++P +L V+ F G V G + +FA+ V Sbjct: 124 ARSNRLESIIRPLLDAMQTLPAFVYLVPVVMLF---GIGNVPGVLVTIVFAL-PPLVRLT 179 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWFF 206 + Q +P D E +R+F + Q + +P + M GL +M+S+S Sbjct: 180 NLGIRQ----VPEDKIEAARAFGCTPRQMLTRVQLPLATSTIMAGLNQTLMLSLS----M 231 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL-LAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ LA + + +L IFL D+L Sbjct: 232 VVIASMISVG-------GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFL-DRL 276 >gi|221638590|ref|YP_002524852.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] gi|221159371|gb|ACM00351.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] Length = 286 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL + P+LD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 127 AAHRPRLYQAMSPVLDLMQTLPTFVYLIPAIVFFGLGMVPGLI-----ATVIFVLPAPI- 180 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T + + + P L+E + +F + Q+ W + +P++ P GL +M+S+S Sbjct: 181 RLT---HLGIASTPMALKEAATAFGATPRQRLWKVELPYAFPQIMTGLNQTIMLSLS 234 >gi|295699467|ref|YP_003607360.1| choline ABC transporter permease [Burkholderia sp. CCGE1002] gi|295438680|gb|ADG17849.1| choline ABC transporter, permease protein [Burkholderia sp. CCGE1002] Length = 300 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ VISL+ AKSR + M++ P+LD+MQ++P +L + F G+V Sbjct: 96 LSSTVISLVLGVPLGIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ ++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLTAL-----GIKHVNHEIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|156742360|ref|YP_001432489.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] gi|156233688|gb|ABU58471.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] Length = 275 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 14/174 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +LP++ + T LS I+L + A+ R L P+L Q++PI+ Sbjct: 77 ETLPRHIAVTMSAALSGFGIALAISLSLGYALAQVRAFDRALTPLLAASQAVPIVAVAPL 136 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ +V+ A L F I ++ T ++S +PR+L +++R + W Sbjct: 137 IVLWVGVGLESRVLVATLVTFFPILSA-----TIVAFRS---VPRELIDMARISGANRWH 188 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 + +P ++PG+ + ++ +A+ VVG+ V G+G+ I +A Sbjct: 189 LLRSVELPLALPGIFGGVKAGLA------LATTGAVVGEFVGGRDGLGALINIA 236 >gi|146305523|ref|YP_001185988.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] gi|145573724|gb|ABP83256.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] Length = 294 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 23/169 (13%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 S+ +ISLL AAKS R+ ++ P+LD MQ++P +L + F G+V G Sbjct: 98 SSTLISLLLGIPLGIWAAKSERVATIIRPVLDFMQTMPAFVYLIPAAMLF---GLGRVPG 154 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP--- 190 IFA+ V + + Q + +++ E +SF + Q + + +P +MP Sbjct: 155 IIATVIFAM-PPAVRLTSLGIRQ----VNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIM 209 Query: 191 -GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 210 AGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 247 >gi|25027925|ref|NP_737979.1| putative nitrate transport permease protein [Corynebacterium efficiens YS-314] gi|23493208|dbj|BAC18179.1| putative nitrate transport permease protein [Corynebacterium efficiens YS-314] Length = 261 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 36/175 (20%), Positives = 80/175 (45%), Gaps = 14/175 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L +I+ + L + + L L P++ I++ + L +L + ++ Sbjct: 77 RVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAWLPIGLALLLD----- 131 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AE A+F I S +W + + ++ +I +++ + W + +P ++P Sbjct: 132 ---AERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLAISRVWLPATLP 188 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 G++ + +S+S W ++ +EM+V G GIG ++ D+ AI+ A+ Sbjct: 189 GIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDIDAIVVAI 237 >gi|134298313|ref|YP_001111809.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] gi|134051013|gb|ABO48984.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] Length = 251 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 31/156 (19%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FR ++ I++ ++ +P+G+ +G IQPF L P V+S Sbjct: 61 SLFRGLMGFILSVMVGMPLGLLMGINNLARRFIQPFVVTLQVVP-------VIS------ 107 Query: 446 LNPNLWLSLLMI-FGTQW------------YILFNVIAGASAFPNDFKEVASSFHITGWR 492 WL L M+ FG++ I+FNV+ G + E+A F + Sbjct: 108 -----WLVLAMVWFGSERVPVFVVVITTLPLIIFNVVQGVMNVEAQYTEMAKVFKVNKKE 162 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 I P I PY++ +A G W A ++E S Sbjct: 163 VLLKIYFPQILPYFLAAMSSALGTTWKAVAMAEFLS 198 >gi|114326749|ref|YP_743906.1| glycine betaine/L-proline transport system permease proW [Granulibacter bethesdensis CGDNIH1] gi|114314923|gb|ABI60983.1| glycine betaine/L-proline transport system permease protein proW [Granulibacter bethesdensis CGDNIH1] Length = 283 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 18/161 (11%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +LS+ ++S L AA L + P+LD+MQ++P +L T+V F + Sbjct: 99 QTLALVLSSALVSTLIGVPLGIAAAHRPWLAQGMRPVLDLMQTLPTFVYLIPTLVLFGLG 158 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 PG + A I +Q+ + ++PR L E +F + WQ W + + Sbjct: 159 AVPGLISTVIFALPAPIRLTQL---------GISSVPRPLIEAGEAFGATRWQLLWKVEL 209 Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 P + + GL +M+S+S VV + ++ G +P+ Sbjct: 210 PGAKTMILAGLTQCIMLSLS----MVVIAALVGAGGLGVPV 246 >gi|254255390|ref|ZP_04948706.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] gi|124901127|gb|EAY71877.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] Length = 295 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L + +L FV +LA S R+G L+ +L M +P + L +++F L G Sbjct: 102 LLRGYALGVLCAFVLTSLAV-STRIGRDLLAMLTSMFNPLPSIALLPIALLWF-GLGTGS 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + + +W + +MY +P L+ R++ L+G ++ + VP ++P Sbjct: 160 LL-------FVLVHAVLWPLALNMYTGFAGVPVTLKMAGRNYGLTGLRQIALILVPAALP 212 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235 >gi|209520159|ref|ZP_03268932.1| choline ABC transporter, permease protein [Burkholderia sp. H160] gi|209499423|gb|EDZ99505.1| choline ABC transporter, permease protein [Burkholderia sp. H160] Length = 300 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ VISL+ AKSR + M++ P+LD+MQ++P +L + F G+V Sbjct: 96 LSSTVISLVLGVPLGIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ ++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLTAL-----GIKHVNHEIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|171317503|ref|ZP_02906693.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] gi|171097332|gb|EDT42177.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] Length = 270 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLAL----NRFLWHPLYLYGTRC 584 + E VV+G+L+ VLA WHP Y G + Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERTTLRWHPAYQSGAKA 270 >gi|170695677|ref|ZP_02886820.1| choline ABC transporter, permease protein [Burkholderia graminis C4D1M] gi|170139476|gb|EDT07661.1| choline ABC transporter, permease protein [Burkholderia graminis C4D1M] Length = 300 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ ISL+ AKSR + M++ P+LD+MQ++P +L + F G+V Sbjct: 96 LSSTFISLVLGVPLGIWTAKSRTVEMMVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|298293328|ref|YP_003695267.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296929839|gb|ADH90648.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 272 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/166 (19%), Positives = 76/166 (45%), Gaps = 5/166 (3%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W +I + Y++W +++ R+ + + I++++ + +GI +GF P++ S + Sbjct: 53 WATIVRMATTIDVATKQYLLWWDTWLSLQRLFLGLGISALMGLVLGIVVGFIPYLRSTFE 112 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF + P P++ ++ +L++FG +I+ +V+ +A P + Sbjct: 113 PFFAAFSLIPPLAVLPILFIIFGLGEVSK----IVLIVFGIAPFIIRDVMLRVAAIPTEQ 168 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 A + + W+ ++LP + P + + G AW I +E Sbjct: 169 IIKAQTLGGSTWQMITGVVLPQVMPRLIDSVRLSLGAAWLFVIAAE 214 >gi|289669834|ref|ZP_06490909.1| ABC transporter permease and substrate-binding protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 490 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPVFG-------IGAK-PAIAALFLYSLLPIVRNT 374 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + L +IPR+L + + + L W + W + +P + +V + + Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 419 >gi|270296459|ref|ZP_06202659.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273863|gb|EFA19725.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 394 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 21/190 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135 +Y + A SR + L PI++++ IP + GF V+ NL G+ ++G+ Sbjct: 198 IYMSEVANSRVRNL-LKPIIELLSGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLVGSI 256 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + AI A+ T + +T ++ N PR + E S + S WQ + + +P+S+ G+ Sbjct: 257 VLAIMALPT--IITVT---EDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSG 311 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249 +++ + +A M+ VI PL I + IA + E Y L +L Sbjct: 312 VVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGPHYEALFLL 371 Query: 250 GVIFLYDQLL 259 GV+ + LL Sbjct: 372 GVVLFFISLL 381 >gi|119944387|ref|YP_942067.1| glycine betaine ABC transporter, binding protein inner membrane component [Psychromonas ingrahamii 37] gi|119862991|gb|ABM02468.1| glycine betaine ABC transporter, binding protein inner membrane component [Psychromonas ingrahamii 37] Length = 356 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+ ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 166 ARSQSAAKIIRPMLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 220 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P +L E +F S Q + + +P +MP G+ +M+S+S Sbjct: 221 TILGIQ---QVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLS----M 273 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 274 VVIASMIAVG-------GLGQMVLRGIGRLDM 298 >gi|300718020|ref|YP_003742823.1| glycine betaine/L-proline transport system permease [Erwinia billingiae Eb661] gi|299063856|emb|CAX60976.1| glycine betaine/L-proline transport system permease protein [Erwinia billingiae Eb661] Length = 412 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 229 ARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 283 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E SF S Q + + +P +MP G+ +M+++S Sbjct: 284 TI---LGIKQVPADLIEAGESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 336 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 337 VVIASMIAVG-------GLGQMVLRGIGRLDM 361 >gi|269128859|ref|YP_003302229.1| binding-protein-dependent transport systems inner membrane component [Thermomonospora curvata DSM 43183] gi|268313817|gb|ACZ00192.1| binding-protein-dependent transport systems inner membrane component [Thermomonospora curvata DSM 43183] Length = 259 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 9/166 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 IA I +PVG+ IG P + P +LL P PL + N + + Sbjct: 73 IAVAIAVPVGVVIGALPLVDRLTGPLLELLRPIPPVALIPLALLAFG----NTGRMATTV 128 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 F W +L + I G A + +F ++ LPG P+ TG A G Sbjct: 129 AAFACSWPVLIHTIRGLRATDPIAVDTMRTFGFGRPAVLWHVALPGAAPFIATGVRVAAG 188 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 + +I +E+ + G G+G+++ E+ V+LG ++ Sbjct: 189 ISLIVTITAELYAGGG-----QGIGSWLIEAGASAGQTHVILGAVV 229 >gi|145297975|ref|YP_001140816.1| glycine betaine/L-proline transport system permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850747|gb|ABO89068.1| glycine betaine/L-proline transport system permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 383 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S RL P+LD MQ+ P +L V+ F G V G + IFA+ M Sbjct: 190 ARSERLSTWTRPLLDAMQTTPAFVYLIPIVMLF---GIGNVPGVVVTVIFALPP-----M 241 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 242 IRLTMLGIRQVPEDLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 298 VVIASMIAVG-------GLGQMVLRGIGRLDM 322 >gi|83644216|ref|YP_432651.1| glycine betaine transporter membrane protein [Hahella chejuensis KCTC 2396] gi|83632259|gb|ABC28226.1| ABC-type proline/glycine betaine transport system, permease component [Hahella chejuensis KCTC 2396] Length = 369 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R + P+LD MQ+ P +L V+ F G V G + IFA+ + Sbjct: 181 ARSDRAASAVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVAVTIIFAL-PPLIRLT 236 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + + Q +P DL E +RSF S Q + + +P + P G+ +M+++S Sbjct: 237 SLGIRQ----VPEDLVEAARSFGASPRQLLFKVQLPLATPTIMAGVNQTLMLALS----M 288 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 289 VVIASMIAVG-------GLGQMVLRGIGRLDM 313 >gi|196250203|ref|ZP_03148897.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. G11MC16] gi|196210387|gb|EDY05152.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. G11MC16] Length = 261 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 15/191 (7%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D+V L+ L Q+ S + R L I FV L R + +L + Sbjct: 44 PTDVVAAAWDLLEKGELWQHLSISFGRALIGFAIGGSLGFVLGLLNGVFRPVERLLDTSI 103 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++IP L + +++F KV + +F I+ + + + N+ Sbjct: 104 QMIRNIPHLAMIPLVILWFGIGEEAKVFLVAIGVLFPIYVNTL--------HGIRNVDAG 155 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L E+ R + L WQ FW + +P ++ ++ + ++ W ++V +T+ G Sbjct: 156 LLEMGRVYGLRPWQLFWRIWLPGALSSILVGLRYALGIMWL------TLIVAETIAADRG 209 Query: 225 IGSYIALAIKE 235 IG Y+A+ +E Sbjct: 210 IG-YLAMNARE 219 >gi|289665040|ref|ZP_06486621.1| ABC transporter permease and substrate-binding protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 490 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPVFG-------IGAK-PAIAALFLYSLLPIVRNT 374 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + L +IPR+L + + + L W + W + +P + +V + + Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 419 >gi|331003007|ref|ZP_08326519.1| hypothetical protein HMPREF0491_01381 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413051|gb|EGG92426.1| hypothetical protein HMPREF0491_01381 [Lachnospiraceae oral taxon 107 str. F0167] Length = 262 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 17/202 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ A +S +F S+ +L PI + ++ IP L ++ ++++F Sbjct: 73 RVGVAFGLSTVFGIALGVSMGYSKLAEAILKPIFEFIRPIPPLAWIPMSILWFGL----- 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + + F IF +T + Y+ N+ + L +R S Q F+ + +P S+P Sbjct: 128 ---GDKSKFFIIFLGCFCFITVNTYEGTKNVDKTLIGAARMLGASERQVFFDIVLPSSVP 184 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 + + ++++ GW VV +EM+ + G+G I + + + I+ ML + Sbjct: 185 YIFAGLQIAVTAGWSAVVGAEMVHSNE------GVGWLIVMGMTYGKTVQIMVGMLAIGL 238 Query: 251 VIFLYD---QLLFRPMIVWSNK 269 V F+ L R + W+N+ Sbjct: 239 VGFVLATGMAKLERRLCAWNNQ 260 >gi|323141264|ref|ZP_08076160.1| ABC transporter, substrate-binding protein, QAT family [Phascolarctobacterium sp. YIT 12067] gi|322414221|gb|EFY05044.1| ABC transporter, substrate-binding protein, QAT family [Phascolarctobacterium sp. YIT 12067] Length = 625 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 12/140 (8%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + T ++S+++ISLL L + SR +L P+LD MQ++P ++ V M Sbjct: 436 NETLAVVISSVIISLLLGLPIGILVSTSRLANSLLRPLLDAMQTMPTFVYMIPAV---ML 492 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L PGKV ++AI V +T Q + ++ E S +F S WQ + + + Sbjct: 493 LGPGKVPAVLATVVYAIVP--VIRLTSHGIQ---QVDPNVVEASAAFGASRWQTLFKVQI 547 Query: 186 PFSMP----GLVWNMMMSMS 201 P +MP G+ MMM+++ Sbjct: 548 PQAMPTIMTGINQTMMMAVA 567 >gi|228477498|ref|ZP_04062134.1| phosphate ABC transporter, permease protein PstC [Streptococcus salivarius SK126] gi|228250933|gb|EEK10121.1| phosphate ABC transporter, permease protein PstC [Streptococcus salivarius SK126] Length = 304 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 L P ++++ IP + GF+ VV F+ L G L+ F +F + +TF Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRLIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 +L +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 178 TLRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGN 237 Query: 217 DTVIP 221 VIP Sbjct: 238 SAVIP 242 >gi|83720465|ref|YP_443020.1| aliphatic sulfonate ABC transporter permease [Burkholderia thailandensis E264] gi|167620180|ref|ZP_02388811.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257139249|ref|ZP_05587511.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83654290|gb|ABC38353.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 268 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + E+ Sbjct: 108 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDAGLVEM 163 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 164 ARSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 217 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G R Sbjct: 218 TMNAREFLQTDVVVVGILLYAALGKLADVLAKWLERATLRWHPAYQPGGRA 268 >gi|312862668|ref|ZP_07722908.1| phosphate ABC transporter, permease protein PstC [Streptococcus vestibularis F0396] gi|322516804|ref|ZP_08069706.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus vestibularis ATCC 49124] gi|311101528|gb|EFQ59731.1| phosphate ABC transporter, permease protein PstC [Streptococcus vestibularis F0396] gi|322124641|gb|EFX96105.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus vestibularis ATCC 49124] Length = 304 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 L P ++++ IP + GF+ VV F+ L G L+ F +F + +TF Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRLIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 +L +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 178 TLRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGN 237 Query: 217 DTVIP 221 VIP Sbjct: 238 SAVIP 242 >gi|163737860|ref|ZP_02145276.1| glycine betaine/L-proline transport system permease, putative [Phaeobacter gallaeciensis BS107] gi|161388476|gb|EDQ12829.1| glycine betaine/L-proline transport system permease, putative [Phaeobacter gallaeciensis BS107] Length = 516 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 W G +T ++ SI I IP+G++ RP + IQP + PA VF +V Sbjct: 329 WEGAMTTLALLGTAACLSILIGIPLGMFAARRPRFYAFIQPIMDFMQTMPAFVF---MVP 385 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++++ + + + MIFG + V+ G P +E A SF W + L Sbjct: 386 VIAFFGVGKPAAVVVTMIFGGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTKVDL 444 Query: 500 PGIFPYYVTG 509 P P G Sbjct: 445 PLASPSIRAG 454 >gi|187926196|ref|YP_001892541.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gi|241665685|ref|YP_002984044.1| binding-protein-dependent transporters inner membrane component [Ralstonia pickettii 12D] gi|187727950|gb|ACD29114.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gi|240867712|gb|ACS65372.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] Length = 298 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 2/116 (1%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N AG + N + V ++ ++G + I++P FP +TG AW Sbjct: 173 WAVSLNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTL 232 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 I SE+ + GLG YI E+ + PEV G+L + L + ++ L Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTL 286 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 11/172 (6%) Query: 93 SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 S RLG + L M +P + L +V+F L G +I F I S VW ++ Sbjct: 125 SNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLI-------FVIVHSVVWAVS 176 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ L V R++ LSG + +P + P ++ + + + W ++ASE Sbjct: 177 LNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 ++ G+G YI + + + +LT++ + L + L+FR + Sbjct: 237 LVF--GVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGLLVENLVFRTL 286 >gi|298290858|ref|YP_003692797.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296927369|gb|ADH88178.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 301 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRV + A +I +P G IG + P + L P + PLV+ Sbjct: 108 AASLFRVFAALAAALVIGVPAGFAIGLSTVGRGILDPIVEFLRPIPPLAYLPLVIIWAGI 167 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L ++L M+ I+ AG + VA + T + R ++LP Sbjct: 168 GESAKVLVIALAMLP----PIIIATAAGTRGVDGNRLNVARALGATRAQLLRLVVLPSAS 223 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T G+G I + + VV G+ ++ Sbjct: 224 PSILTGTRIALGAGWSTLVAAELVA------ATRGVGFMIQSAANFLATDVVVAGIFLIA 277 Query: 564 CFVLALN 570 A Sbjct: 278 AVAFAFE 284 >gi|254689762|ref|ZP_05153016.1| choline ABC transporter, permease protein [Brucella abortus bv. 6 str. 870] gi|256258014|ref|ZP_05463550.1| choline ABC transporter, permease protein [Brucella abortus bv. 9 str. C68] gi|260755294|ref|ZP_05867642.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 6 str. 870] gi|260884309|ref|ZP_05895923.1| glycine betaine/L-proline ABC transporter permease [Brucella abortus bv. 9 str. C68] gi|297248846|ref|ZP_06932564.1| choline ABC transporter, permease [Brucella abortus bv. 5 str. B3196] gi|260675402|gb|EEX62223.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 6 str. 870] gi|260873837|gb|EEX80906.1| glycine betaine/L-proline ABC transporter permease [Brucella abortus bv. 9 str. C68] gi|297176015|gb|EFH35362.1| choline ABC transporter, permease [Brucella abortus bv. 5 str. B3196] Length = 278 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +LS+ + ++ AA L + P+LD+MQ++P +L +V+F Sbjct: 95 KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGI- 153 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G V+G IF I + Q S+ + P L E +F S Q W + + Sbjct: 154 --GMVLGLLATVIFVI------PAPIRLTQLSISSTPASLIEAGEAFGASRSQLLWKVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P++MP GL +M+S+S Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225 >gi|239630970|ref|ZP_04674001.1| taurine transport system permease protein tauC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527253|gb|EEQ66254.1| taurine transport system permease protein tauC [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 264 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 24/196 (12%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ RV V + A I+ IP+G++ + I S I P Q L P ++ L++ Sbjct: 72 LTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLI------ 125 Query: 445 HLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LWL LL+ I S +++ A+S W+ + + Sbjct: 126 -----LWLGIGEASKVLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFLRV 180 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 I P P +TG +A G A+ + +E+ + T+G+G + +++ +++ Sbjct: 181 IFPASLPAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVMIV 234 Query: 558 GVLIMCCFVLALNRFL 573 +++M + L+ FL Sbjct: 235 DIVVMGITGMLLDWFL 250 >gi|158338271|ref|YP_001519448.1| nitrate ABC transporter permease [Acaryochloris marina MBIC11017] gi|158308512|gb|ABW30129.1| nitrate ABC transporter, permease protein [Acaryochloris marina MBIC11017] Length = 276 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 11/195 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L + W ++ RV + +ASII +P+GI +G + P+ QLL + PL Sbjct: 77 LGIGWNLLTSLRRVAIGYTLASIIAVPLGILLGMSRVAAKAFNPYVQLLKPVSPLAWLPL 136 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + Y N +++ + W L N + G + ++ +V+ + + R Sbjct: 137 GL----YIFRNSENTGVFIILISSIWPTLVNTVFGVANVSPEYLDVSKTLGASKLRTVFK 192 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +I+P P + G + G AW + +E+ L +GLG ++ S ++ Sbjct: 193 VIIPAALPNIIAGLRISMGIAWLVIVAAEM-------LLGSGLGYFVWNEWNNLSISNIL 245 Query: 557 LGVLIMCCFVLALNR 571 + + I+ + L++ Sbjct: 246 VAIFIIGLVGIVLDQ 260 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 8/122 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR P + +++ + L +L + F N +E +F I S +W Sbjct: 111 SRVAAKAFNPYVQLLKPVSPLAWLPLGLYIFRN--------SENTGVFIILISSIWPTLV 162 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + N+ + +VS++ S + + + +P ++P ++ + +SM W +VA+EM Sbjct: 163 NTVFGVANVSPEYLDVSKTLGASKLRTVFKVIIPAALPNIIAGLRISMGIAWLVIVAAEM 222 Query: 213 IV 214 ++ Sbjct: 223 LL 224 >gi|84625907|ref|YP_453279.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369847|dbj|BAE71005.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 489 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + L +IPR+L + + + L W + W + +P + +V + + Sbjct: 374 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 418 >gi|328466083|gb|EGF37255.1| phosphate ABC transporter permease [Lactobacillus rhamnosus MTCC 5462] Length = 218 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 VL P+++++ IP + GF+ +V+ + N++ G G LA F +F + +T Sbjct: 36 VLQPVIELLVGIPSVVYGFIGLSVIVPFIRNIFGGTGFGI-LAGTFVLFVMILPTVTSMT 94 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 95 VDALKAVPRHYREASLALGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVI 154 Query: 215 VGDTVIP 221 ++P Sbjct: 155 GNAALLP 161 >gi|330816756|ref|YP_004360461.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia gladioli BSR3] gi|327369149|gb|AEA60505.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia gladioli BSR3] Length = 277 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + I N G + + E+ Sbjct: 117 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVSLGVFFPIYINTYHGIRSVDANLIEM 172 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 173 AKSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 226 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G + Sbjct: 227 TMNAREFLQTDVVVVGILLYAILGKLADVLAKWLERATLRWHPAYQPGAKS 277 >gi|301065292|ref|YP_003787315.1| taurine transport system permease tauC [Lactobacillus casei str. Zhang] gi|300437699|gb|ADK17465.1| taurine transport system permease protein tauC [Lactobacillus casei str. Zhang] Length = 260 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 24/196 (12%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ RV V + A I+ IP+G++ + I S I P Q L P ++ L++ Sbjct: 68 LTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLI------ 121 Query: 445 HLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LWL LL+ I S +++ A+S W+ + + Sbjct: 122 -----LWLGIGEASKVLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFLRV 176 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 I P P +TG +A G A+ + +E+ + T+G+G + +++ +++ Sbjct: 177 IFPASLPAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVMIV 230 Query: 558 GVLIMCCFVLALNRFL 573 +++M + L+ FL Sbjct: 231 DIVVMGITGMLLDWFL 246 >gi|289167579|ref|YP_003445848.1| ABC transporter, permease-phosphate transport [Streptococcus mitis B6] gi|307709070|ref|ZP_07645529.1| phosphate ABC transporter, permease protein PstC [Streptococcus mitis SK564] gi|322376226|ref|ZP_08050719.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp. M334] gi|288907146|emb|CBJ21980.1| ABC transporter, permease-phosphate transport [Streptococcus mitis B6] gi|307620016|gb|EFN99133.1| phosphate ABC transporter, permease protein PstC [Streptococcus mitis SK564] gi|321282033|gb|EFX59040.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp. M334] Length = 305 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ VV + +++ G G L+ IF +F + +TF Sbjct: 117 ILQPAIELLVGIPSVVYGFIGLQVVVPFVRSVFGGTGFGI-LSGIFVLFVMILPTVTFMT 175 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + G+ ++ M+ + +A +M+V Sbjct: 176 TDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEALAIQMVV 235 Query: 215 VGDTVIP 221 V+P Sbjct: 236 GNSAVVP 242 >gi|221196133|ref|ZP_03569180.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD2M] gi|221202806|ref|ZP_03575825.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD2] gi|221176740|gb|EEE09168.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD2] gi|221182687|gb|EEE15087.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD2M] Length = 287 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61 PP + R + + L + ++ +G++ +P ++V D + Sbjct: 21 PPRATPRDPLRAWRIAGIALPFAALALIEYGVRRGGLPANLVPAPSEIFDTLARMGAARV 80 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 ++ + LR+ + I V SRR+ +L P +++IP L ++ ++ Sbjct: 81 ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + K+ L AI A F + ++ + N+ R L E+ +RL F Sbjct: 141 WLGIDEAPKIT---LIAIGAFFP-----VHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P ++P +V + +S W F+VA+E+I Sbjct: 193 RILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 226 Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 25/178 (14%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV I + + + VG +G I + ++P Q L A P+ + P+++ Sbjct: 87 SALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLL------- 139 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + V+AG E+ + + + +R I+ Sbjct: 140 ----LWLGIDEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFRRIL 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 LP P VTG T AW + +E+ + T GLG +++ E G P++V Sbjct: 196 LPAALPQIVTGLRTGLSLAWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 246 >gi|220903849|ref|YP_002479161.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868148|gb|ACL48483.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 277 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 27/207 (13%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV------ 438 I++ RV IA+ + +P+GI +G++P +++ + F L + P + PLV+ Sbjct: 63 ISLARVFAGYFIAAALAVPLGIVMGYKPGVNTALSTFLGLFRSIPPLAWVPLVLAWFGML 122 Query: 439 -----------SCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASS 485 + Y+H N+ +S++ I G + IL + I G P + A Sbjct: 123 SLADVFSVPIGAAYPYFH---NIKVSMIFIIFIGGFYPILTSAIHGVGMVPQTLTDAARV 179 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 +R ++LP P V G G +W + +E+ + +G+G I Sbjct: 180 LGAGQMDIFRKVLLPYAAPSIVNGLRIGLGVSWMCLVSAEM-----LPGSLSGVGYLITH 234 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRF 572 + G V+ G++ + L+R Sbjct: 235 AYTVGRTDVVIAGMISIGVVGALLDRL 261 >gi|153833250|ref|ZP_01985917.1| glycine betaine transport system permease protein opuAB [Vibrio harveyi HY01] gi|156977390|ref|YP_001448296.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116] gi|148870521|gb|EDL69436.1| glycine betaine transport system permease protein opuAB [Vibrio harveyi HY01] gi|156528984|gb|ABU74069.1| hypothetical protein VIBHAR_06177 [Vibrio harveyi ATCC BAA-1116] Length = 280 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEELIEAGKAFGASRMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKAP 275 >gi|58584134|ref|YP_203150.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428728|gb|AAW77765.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae KACC10331] Length = 490 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 374 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + L +IPR+L + + + L W + W + +P + +V + + Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 419 >gi|323494248|ref|ZP_08099360.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio brasiliensis LMG 20546] gi|323311411|gb|EGA64563.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio brasiliensis LMG 20546] Length = 299 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 29/179 (16%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS + + + + V A+S R+ ++ P+LD+MQ++P +L V Sbjct: 101 EDTMRTLSIITVCTMLSIVLGIPIGIAMARSNRIQSIVTPMLDVMQTMPAFVYLIPVV-- 158 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + + +++ E S +F S Q+ + Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEASTAFGASAKQRLF 211 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P +MP G+ +MM++S M+V+ ++I + G+G + +I Q Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259 >gi|296109397|ref|YP_003616346.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus infernus ME] gi|295434211|gb|ADG13382.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus infernus ME] Length = 260 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 9/191 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+ IIAS++ +P+GI +G+ I++ +L P + PL ++++ Sbjct: 66 ISIKRVLSGFIIASLLAVPLGILMGYFTVINALFDTVIELFRPIPPLAWVPL---SLAWF 122 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + ++ G + IL N I+G P E A + +++P P Sbjct: 123 GIG-EVSMVFIIFIGAFFPILINTISGVKGVPKPLIEAALTLGAKKRDILIKVVIPASSP 181 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG G AW + +E+ + +GLG I + V+ ++++ Sbjct: 182 SILTGLRVGIGIAWMCVVAAEMLPGSN-----SGLGYLITYAYSLSRMDIVIAAMIVIGL 236 Query: 565 FVLALNRFLWH 575 L L+R L + Sbjct: 237 IGLILDRGLRY 247 >gi|299822937|ref|ZP_07054823.1| glycine betaine/proline ABC superfamily ATP binding cassette transporter [Listeria grayi DSM 20601] gi|299816466|gb|EFI83704.1| glycine betaine/proline ABC superfamily ATP binding cassette transporter [Listeria grayi DSM 20601] Length = 287 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 +KS+ ++ PILD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 121 SKSKIAESIIKPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRFTN 177 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + +P +L E S S+ +GWQK + +P + M G+ +M+++S Sbjct: 178 L------GIRQVPVELVEASDSYGTTGWQKLIKVELPIAKSTIMAGINQTVMLALS---- 227 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ + Sbjct: 228 ------MVVIA-SMIGAPGLGRQVLQALQRAQV 253 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 8/117 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V+V ++A II +PVG+W+ S I+P + P V+ + V+++ Sbjct: 98 TITLVIVSSLVAIIIGVPVGVWMSKSKIAESIIKPILDFMQTMPGFVYL---IPAVAFFG 154 Query: 446 LN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + P ++ S+ IF + F + G P + E + S+ TGW+ + LP Sbjct: 155 IGVVPGVFASV--IFALPPTVRFTNL-GIRQVPVELVEASDSYGTTGWQKLIKVELP 208 >gi|77463152|ref|YP_352656.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77387570|gb|ABA78755.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 266 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A ++ IP+G +G + + F LAA P F PL++ + ++++ Sbjct: 84 AVLVGIPLGALMGMVRLLGRTLDLFVFALAATPRVAFIPLIIVLLGLGTEAK----AMIV 139 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G I+ N AG A + E+A S + R +I+LPG P+ V G Sbjct: 140 FLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVG 192 >gi|188574536|ref|YP_001911465.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae PXO99A] gi|188518988|gb|ACD56933.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzae PXO99A] Length = 489 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + L +IPR+L + + + L W + W + +P + +V + + Sbjct: 374 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 418 >gi|167584096|ref|ZP_02376484.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ubonensis Bu] Length = 298 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|332558026|ref|ZP_08412348.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] gi|332275738|gb|EGJ21053.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides WS8N] Length = 266 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A ++ IP+G +G + + F LAA P F PL++ + ++++ Sbjct: 84 AVLVGIPLGALMGMVRLLGRTLDIFVFALAATPRVAFIPLIIVLLGLGTEAK----AMIV 139 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G I+ N AG A + E+A S + R +I+LPG P+ V G Sbjct: 140 FLGAVMPIVLNTYAGVLARDGELIEMARSTGASAARIQLHIVLPGALPFLVVG 192 >gi|310817058|ref|YP_003965022.1| Binding-protein-dependent transport systems inner membrane component [Ketogulonicigenium vulgare Y25] gi|308755793|gb|ADO43722.1| Binding-protein-dependent transport systems inner membrane component [Ketogulonicigenium vulgare Y25] Length = 263 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 16/183 (8%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A ++ +P+G+ +G + ++ + LAA P F PL++ L L + Sbjct: 82 LAILVAVPLGLVMGSLKLLGKTLEVYLYALAATPRVAFIPLII-----VFLGLGLEAKIT 136 Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFPYYVTG-AIT 512 ++F G I+ N G + E+A S R +WR I+LPG PY + G I Sbjct: 137 VVFMGAVMPIVMNTYTGVQQVDRELIEMARSVGAKRRRIYWR-IVLPGSLPYLIAGLRIG 195 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A G N ++V+E ++ GLG +A E + VL + + + Sbjct: 196 ATIGLIN-TVVAE------LYTSVRGLGGLLATYGNSFRMAEYFVVVLSLALIGVVVTEI 248 Query: 573 LWH 575 L H Sbjct: 249 LRH 251 >gi|160941503|ref|ZP_02088837.1| hypothetical protein CLOBOL_06393 [Clostridium bolteae ATCC BAA-613] gi|158435587|gb|EDP13354.1| hypothetical protein CLOBOL_06393 [Clostridium bolteae ATCC BAA-613] Length = 277 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 8/129 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI ++++ +P + ++ VV+ IG + A+ FT+ V + Y + Sbjct: 120 PIFELVRPVPPIAWIPLVVVWMG-------IGLKAKALIIFFTAFV-PCVINSYTGIKLT 171 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L VSR+F S + FW +GVP S+P + + +++ W +VA+EM+ + Sbjct: 172 NKTLINVSRTFGASNAEIFWKVGVPSSLPMVFAGIRVALGNSWSTLVAAEMLAASAGLGY 231 Query: 222 LPGIGSYIA 230 + IG +A Sbjct: 232 MIQIGRTVA 240 >gi|153955397|ref|YP_001396162.1| ABC transporter permease [Clostridium kluyveri DSM 555] gi|219855814|ref|YP_002472936.1| hypothetical protein CKR_2471 [Clostridium kluyveri NBRC 12016] gi|146348255|gb|EDK34791.1| Predicted ABC transporter, permease component [Clostridium kluyveri DSM 555] gi|219569538|dbj|BAH07522.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 205 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 12/176 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A ++ IP+G+ IG+ I P Q+ A FP+ + + + Sbjct: 27 LALLVAIPLGLVIGWFKKFERFIDPLLQIFRQTSALALFPVFILVFGIGETS-----KIA 81 Query: 456 MIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +IF G QW IL + I G + A S + + +R +ILP FP +TG + Sbjct: 82 IIFWGVQWPILISTIEGVKNVDPILIKSARSMGASQFTIFRKVILPSAFPSIITGIRLSA 141 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A I +E+ ++GLG + ++ K P++ ++ M + +N Sbjct: 142 TSAILVLIAAEMMG------ASSGLGYLLYDTQVKYQIPKMYAAIITMSLIGIIVN 191 >gi|62290461|ref|YP_222254.1| glycine betaine/L-proline ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82700384|ref|YP_414958.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|189024691|ref|YP_001935459.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|237815970|ref|ZP_04594967.1| choline ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|254697906|ref|ZP_05159734.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 2 str. 86/8/59] gi|254730796|ref|ZP_05189374.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 4 str. 292] gi|260546994|ref|ZP_05822733.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|260758515|ref|ZP_05870863.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 4 str. 292] gi|260762339|ref|ZP_05874682.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 2 str. 86/8/59] gi|62196593|gb|AAX74893.1| hypothetical glycine betaine/L-proline ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82616485|emb|CAJ11550.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis biovar Abortus 2308] gi|189020263|gb|ACD72985.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|237789268|gb|EEP63479.1| choline ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|260096044|gb|EEW79921.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|260668833|gb|EEX55773.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 4 str. 292] gi|260672771|gb|EEX59592.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 2 str. 86/8/59] Length = 278 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +LS+ + ++ AA L + P+LD+MQ++P +L +V+F + Sbjct: 95 KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG LA + + + + S+ + P L E +F S Q W + + Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLSISST----PASLIEAGEAFGTSRSQLLWKVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P++MP GL +M+S+S Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225 >gi|254249915|ref|ZP_04943235.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia PC184] gi|124876416|gb|EAY66406.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia PC184] Length = 298 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|221200267|ref|ZP_03573309.1| choline ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221205947|ref|ZP_03578961.1| choline ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221173959|gb|EEE06392.1| choline ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221179608|gb|EEE12013.1| choline ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 298 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|182677669|ref|YP_001831815.1| binding-protein-dependent transport systems inner membrane component [Beijerinckia indica subsp. indica ATCC 9039] gi|182633552|gb|ACB94326.1| binding-protein-dependent transport systems inner membrane component [Beijerinckia indica subsp. indica ATCC 9039] Length = 279 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 29/202 (14%) Query: 83 TFVYATLAAK--------SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 F+Y +LAA SR++ + P D ++ IP + +L V++ P K++ Sbjct: 93 AFLYGSLAALGLGFAAGLSRKVELFFGPTFDTIRHIPAIAWLPLIVLWLGIGAPAKILVI 152 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 + F +F + V Q + + R+ E+++ L+ WQ + +P +MP ++ Sbjct: 153 AKSVFFPVFLNTV--------QGIRQVERNYVELAKVLTLTRWQFVRQVVLPAAMPSILV 204 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI 252 ++ + W ++VV + + L G+G I A + D L + ++ ++G Sbjct: 205 SLRYAAGLAW------ALVVVAEGLSGLEGLGFLIFRAQGLLLTDQLVVCMVIIGLVG-- 256 Query: 253 FLYDQ---LLFRPMIVWSNKFR 271 F D+ LL R ++ W F Sbjct: 257 FSIDRVMALLQRRLLRWKQGFE 278 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 26/147 (17%) Query: 408 IGFRPHISSKIQ----PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL------SLLMI 457 +GF +S K++ P + PA + PL+V LWL +L+I Sbjct: 104 LGFAAGLSRKVELFFGPTFDTIRHIPAIAWLPLIV-----------LWLGIGAPAKILVI 152 Query: 458 FGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + ++ +F N + G ++ E+A +T W++ R ++LP P + A G Sbjct: 153 AKSVFFPVFLNTVQGIRQVERNYVELAKVLTLTRWQFVRQVVLPAAMPSILVSLRYAAGL 212 Query: 517 AWNASIVSE----VASWGHIHLRTTGL 539 AW +V+E + G + R GL Sbjct: 213 AWALVVVAEGLSGLEGLGFLIFRAQGL 239 >gi|166710140|ref|ZP_02241347.1| ABC transporter amino acid permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 489 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 322 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 373 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + L +IPR+L + + + L W + W + +P + +V + + Sbjct: 374 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELPLARRTIVAGIQTA 418 >gi|326332259|ref|ZP_08198539.1| sulfonate ABC transporter, permease protein SsuC [Nocardioidaceae bacterium Broad-1] gi|325949965|gb|EGD42025.1| sulfonate ABC transporter, permease protein SsuC [Nocardioidaceae bacterium Broad-1] Length = 285 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 14/173 (8%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G AW+ IG Q+ + ++ R + ++ ++I +G +G + Sbjct: 73 GTAWELIG----SGQLQEAI------AVSARRAALGFLLGALIAFVLGGIVGLSALGDAL 122 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P Q+L P PL + P ++L L + + N++A Sbjct: 123 VDPLVQMLRTLPLFGLVPLFIIWFGIKE-EPKIYLVALFVIVPLY---LNLVAALRGVDP 178 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 D EVA + +T R++ LP + P + G A G AW A IV+E + G Sbjct: 179 DLAEVAGALRLTWTERLRHLYLPAVTPGLLVGLRQALGMAWIALIVAEQVNAG 231 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/122 (22%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 96 LGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 LG LV P++ +++++P+ G + +++F K+ L A+F I + ++ Sbjct: 118 LGDALVDPLVQMLRTLPLFGLVPLFIIWFGIKEEPKIY---LVALFVIVP-----LYLNL 169 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L + DL EV+ + RL+ ++ +L +P PGL+ + ++ W ++ +E + Sbjct: 170 VAALRGVDPDLAEVAGALRLTWTERLRHLYLPAVTPGLLVGLRQALGMAWIALIVAEQVN 229 Query: 215 VG 216 G Sbjct: 230 AG 231 >gi|294497625|ref|YP_003561325.1| glycine/betaine ABC transporter permease OpuAB [Bacillus megaterium QM B1551] gi|294347562|gb|ADE67891.1| glycine/betaine ABC transporter, permease protein OpuAB [Bacillus megaterium QM B1551] Length = 281 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/202 (21%), Positives = 101/202 (50%), Gaps = 27/202 (13%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T +L+++ IS++ A++S + ++ PILD MQ++P +L + + Sbjct: 89 QETMDTLALVLTSVFISIIVGIPLGIWASQSEKTARIITPILDFMQTMPAFVYLIPALFF 148 Query: 123 F-MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 F + + PG + + IFA+ T ++ N+ + +P DL E + ++ + QK Sbjct: 149 FGIGVVPGVI----SSVIFAMPPTIRLTNL------GIREVPADLVEAANAYGSTTKQKL 198 Query: 181 WYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + + +P + M G+ ++M+S+S M+V+ +++ PG+G+ + A+ Sbjct: 199 FKVQLPLATKTIMAGINQSIMLSLS----------MVVIA-SLVGAPGLGAEVYRAVSRL 247 Query: 237 DLLAILYAMLTMLGVIFLYDQL 258 ++ A ++++ + + D++ Sbjct: 248 EVGTGFEAGISIVILAIILDRI 269 >gi|17986723|ref|NP_539357.1| glycine betaine/L-proline transport system permease protein proW [Brucella melitensis bv. 1 str. 16M] gi|225853055|ref|YP_002733288.1| choline ABC transporter permease [Brucella melitensis ATCC 23457] gi|254694250|ref|ZP_05156078.1| choline ABC transporter, permease protein [Brucella abortus bv. 3 str. Tulya] gi|256045197|ref|ZP_05448096.1| choline ABC transporter, permease protein [Brucella melitensis bv. 1 str. Rev.1] gi|256114149|ref|ZP_05454903.1| choline ABC transporter, permease protein [Brucella melitensis bv. 3 str. Ether] gi|256263464|ref|ZP_05465996.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|260565203|ref|ZP_05835687.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|261214558|ref|ZP_05928839.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 3 str. Tulya] gi|265991631|ref|ZP_06104188.1| glycine betaine/L-proline ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|265995468|ref|ZP_06108025.1| glycine betaine/L-proline ABC transporter permease [Brucella melitensis bv. 3 str. Ether] gi|17982347|gb|AAL51621.1| glycine betaine/l-proline transport system permease protein prow [Brucella melitensis bv. 1 str. 16M] gi|225641420|gb|ACO01334.1| choline ABC transporter, permease protein [Brucella melitensis ATCC 23457] gi|260151271|gb|EEW86365.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|260916165|gb|EEX83026.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 3 str. Tulya] gi|262766581|gb|EEZ12370.1| glycine betaine/L-proline ABC transporter permease [Brucella melitensis bv. 3 str. Ether] gi|263002415|gb|EEZ14990.1| glycine betaine/L-proline ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|263093471|gb|EEZ17521.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|326409597|gb|ADZ66662.1| choline ABC transporter permease [Brucella melitensis M28] gi|326539301|gb|ADZ87516.1| choline ABC transporter, permease protein [Brucella melitensis M5-90] Length = 278 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +LS+ + ++ AA L + P+LD+MQ++P +L +V+F + Sbjct: 95 KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG LA + + + + S+ + P L E +F S Q W + + Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLSISST----PASLIEAGEAFGASRSQLLWKVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P++MP GL +M+S+S Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225 >gi|84386103|ref|ZP_00989132.1| putative permease of ABC transporter [Vibrio splendidus 12B01] gi|84378873|gb|EAP95727.1| putative permease of ABC transporter [Vibrio splendidus 12B01] Length = 266 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L VL PILD+MQ++P +L T+V Sbjct: 77 QEMLETFVLVFAATTISVLIGVPVGIMAAHRPWLYTVLRPILDLMQTVPTFVYLIPTLVL 136 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + Sbjct: 137 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTKVPEELIEAGKAFGASRMKLLM 187 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 188 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 240 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 241 FEAGLAIVLVAIILDRLCKTP 261 >gi|258513837|ref|YP_003190059.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum acetoxidans DSM 771] gi|257777542|gb|ACV61436.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum acetoxidans DSM 771] Length = 277 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 T +LSA +L+ +F L A+S ++P+LD+MQ++P +L V++F Sbjct: 91 ETLALVLSATFFALIISFPIGILTARSGVFHKAVMPVLDLMQTMPPFVYLVPAVIFFQI- 149 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G IFA+ V +T + +P +L E + +F + QK + +P Sbjct: 150 --GNVPGLIATIIFAM--PPVIRLT---GLGIRQVPVELIEAAEAFGSTPGQKLVKVQIP 202 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 ++P ++ + + VV + MI G G+GS + I+ Sbjct: 203 LALPTIMAGVNQCILLALSMVVIAAMIGAG-------GLGSVVLRGIQR 244 >gi|332967757|gb|EGK06863.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 218 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 10/119 (8%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A+++ +L L +++ + +++ I+ ++Q+ P L L F + ++ Sbjct: 27 LIAVLLGILVAIPLGILLSRAPKAAGLVMGIVGVVQTFPSLAILAFFI---------PIL 77 Query: 133 G-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G + AI A+F V + + Y + + + L E R ++GWQ+ Y+ VP +MP Sbjct: 78 GVGTVPAIVALFLYSVLPILRNTYTGIRGVNQGLLEAGRGMGMTGWQRIRYVEVPLAMP 136 >gi|322391754|ref|ZP_08065219.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus peroris ATCC 700780] gi|321145234|gb|EFX40630.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus peroris ATCC 700780] Length = 305 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 5/133 (3%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148 S + +L P ++++ IP + GF+ VV + ++ G G L+ IF +F + Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILP 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +TF SL +PR E S + + WQ W + + + G+ ++ M+ + + Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229 Query: 209 ASEMIVVGDTVIP 221 A +M+V V+P Sbjct: 230 AIQMVVGNSAVVP 242 >gi|221209305|ref|ZP_03582286.1| choline ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221169993|gb|EEE02459.1| choline ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 295 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 93 LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 149 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 150 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 204 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 205 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 243 >gi|254254558|ref|ZP_04947875.1| ABC transporter membrane-spanning permease - choline transporter [Burkholderia dolosa AUO158] gi|124899203|gb|EAY71046.1| ABC transporter membrane-spanning permease - choline transporter [Burkholderia dolosa AUO158] Length = 298 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|254505697|ref|ZP_05117843.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus 16] gi|219551350|gb|EED28329.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus 16] Length = 280 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 17/190 (8%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVI 132 +A IS+L +AA L +L PILD+MQ++P +L T+V F + + PG + Sbjct: 102 AATTISVLVGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVLFGLGIVPGLIS 161 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 IFAI + +T Y + +P +L E ++F + + + + +P +MP + Sbjct: 162 ----TIIFAI--AAPIRLT---YLGITKVPEELVEAGKAFGATRMKLLFKVELPAAMPSI 212 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 M+G ++ S +VV ++ G+G + A+ ++ A L ++ V Sbjct: 213 -------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQGFEAGLAIVLVA 265 Query: 253 FLYDQLLFRP 262 + D+L P Sbjct: 266 IILDRLCKSP 275 >gi|170741621|ref|YP_001770276.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168195895|gb|ACA17842.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 251 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 19/155 (12%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 ++ +++ +P L ++ F +++F + AA+F I W + F+ + ++ + Sbjct: 97 VVRVLRPVPGLAWVPFAIIWFWV--------SPAAALFIIAVGVFWIVYFASHGAIRGVD 148 Query: 163 RDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 RDL EV+++F S ++ + P + PG++ + ++ W VVA+E+ V Sbjct: 149 RDLVEVAQAFGFRSAPERLLKVVWPAATPGVLVGVRTAIGQAWMAVVAAEIFGV------ 202 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 PG+G + ++ LLA ++ ML + LY Sbjct: 203 -PGLGQRM---MQASTLLATDIVVVYMLTMALLYG 233 >gi|323530093|ref|YP_004232245.1| choline ABC transporter permease [Burkholderia sp. CCGE1001] gi|323387095|gb|ADX59185.1| choline ABC transporter, permease protein [Burkholderia sp. CCGE1001] Length = 300 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ ISL+ AKSR + M++ P+LD+MQ++P +L + F G+V Sbjct: 96 LSSTFISLVLGVPLGIWTAKSRTVEMMVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MTGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|195940825|ref|ZP_03086207.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. EC4024] Length = 283 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 171 ARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 225 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 T + +P DL E SRSF S Q + + +P +MP G+ +M+++S Sbjct: 226 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277 >gi|323698733|ref|ZP_08110645.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. ND132] gi|323458665|gb|EGB14530.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans ND132] Length = 276 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 27/191 (14%) Query: 69 TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TL M LS++VI + ++ +S R L P+LD MQ+ P +L V+ F Sbjct: 93 TLAMVLSSVVICAVIGIPLGIMSGRSERFEAGLRPVLDAMQTTPAFVYLVPIVMLF---S 149 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G IFA+ + +T + + +L E +++F + WQ + +P Sbjct: 150 VGNVAGVLATIIFAL--PPIIRLT---GLGIRQVHPELVEAAQAFGATRWQVLVKVQIPL 204 Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +MP GL +MM++S VV + +I G G+GS + L + D I Sbjct: 205 AMPTILAGLNQTIMMALS----MVVIAALIGAG-------GLGSPVILGLNTLD---IGR 250 Query: 244 AMLTMLGVIFL 254 A++ LG++ + Sbjct: 251 AVVGGLGIVLM 261 Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 9/164 (5%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 VV GV +AW+ G + F+ +L V +LG IT+ V+ ++I ++I IP+G Sbjct: 53 VVIGVVCLLAWKFSGKRLALFSLASMLLVGFLGLWEETMITLAMVLSSVVICAVIGIPLG 112 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 I G + ++P + PA V+ V V + + + +IF I Sbjct: 113 IMSGRSERFEAGLRPVLDAMQTTPAFVYL---VPIVMLFSVGNVAGVLATIIFALPPIIR 169 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + P + E A +F T W+ + +P P + G Sbjct: 170 LTGLGIRQVHP-ELVEAAQAFGATRWQVLVKVQIPLAMPTILAG 212 >gi|209520862|ref|ZP_03269604.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209498709|gb|EDZ98822.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 293 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 23/153 (15%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 A+++R+ +VL +LD MQ++P +L V+ F G+V +FA+ V Sbjct: 112 GARNKRVELVLRSLLDFMQTMPAFVYLIPAVILF---GLGRVPAVIATVVFAM-PPVVRL 167 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 T + Q + +L E RSF + Q W + +P ++P G+ +MM++S Sbjct: 168 TTLGIRQ----VREELLEAGRSFGSTDLQLLWKIQLPNALPSIMAGVNQTIMMALS---- 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI G G+G Y+ I+ D+ Sbjct: 220 MVVIASMIGAG-------GLGEYVLSGIQRLDI 245 >gi|126739081|ref|ZP_01754775.1| Glycine betaine/L-proline transport system permease protein [Roseobacter sp. SK209-2-6] gi|126719698|gb|EBA16406.1| Glycine betaine/L-proline transport system permease protein [Roseobacter sp. SK209-2-6] Length = 516 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 W G +T ++ SI I IP+G++ RP + IQP + PA VF +V Sbjct: 329 WEGAMTTLALLGTAACLSIVIGIPLGMFAARRPTFYAVIQPIMDFMQTMPAFVF---MVP 385 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++++ + + + MIFG + V+ G P +E A SF W + L Sbjct: 386 VIAFFGVGKPAAVIVTMIFGGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTKVDL 444 Query: 500 PGIFPYYVTG 509 P P G Sbjct: 445 PLASPSIRAG 454 >gi|167031273|ref|YP_001666504.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166857761|gb|ABY96168.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 279 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 10/169 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVGI IG+ + P + P + PL+V L+ L L L IF Sbjct: 103 IPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGELSKVL-LIYLAIFAP- 160 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 I G A S T + R++ILP P +TG G W+ Sbjct: 161 --IAIATATGVRTVDPAKLRAAQSLGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTL 218 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ + T+GLG + + + VVLG+L++ AL Sbjct: 219 VAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALIAFALE 261 >gi|325288674|ref|YP_004264855.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324964075|gb|ADY54854.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 279 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 23/159 (14%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P + L M+SA+V S+ LAAK+ + ++ P+LD MQ++P +L ++ Sbjct: 85 PAFLDTLILVMISALV-SMAVGIPLGILAAKNDKFNWLISPVLDFMQTMPAYVYLIPALL 143 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQ 178 +F + + A+F + V++M ++ + + +P +L EV +F Q Sbjct: 144 FF-----------GIGKVPAVFATVVFSMPPAIRLTNLGIRQVPVELVEVGEAFGSKPGQ 192 Query: 179 KFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P G+ MM+S+S VV S MI Sbjct: 193 LLLKIQLPVALPTIMAGINQTMMLSLS----MVVISSMI 227 >gi|283834315|ref|ZP_06354056.1| taurine uptake ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291069845|gb|EFE07954.1| taurine uptake ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 276 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 19/183 (10%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVGI +G P I + P +L P + PL+V + + L L IF Sbjct: 100 IPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPLMVIWFGIGETS-KILLIYLAIFAP- 157 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + + +AG + A S + + ++ILPG P +TG G W+ Sbjct: 158 --VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTL 215 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC--CFVL-----ALNRFL- 573 + +E+ + T GLG + + E + V+ G+ ++ F+L AL R L Sbjct: 216 VAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFILELGLRALQRRLT 269 Query: 574 -WH 575 WH Sbjct: 270 PWH 272 >gi|229826018|ref|ZP_04452087.1| hypothetical protein GCWU000182_01382 [Abiotrophia defectiva ATCC 49176] gi|229789760|gb|EEP25874.1| hypothetical protein GCWU000182_01382 [Abiotrophia defectiva ATCC 49176] Length = 266 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/189 (21%), Positives = 86/189 (45%), Gaps = 14/189 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L A +I+ + SR + P+ + ++ IP L ++ ++++F Sbjct: 76 RVLVAFLIATVAGVFLGVFMGYSRTFEAIFKPLFEFVRPIPPLAWIPMSILWFG------ 129 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E + F IF +T + Y N+ + L +R + Q F + +P ++P Sbjct: 130 -IGDE-SKWFIIFLGSFTFITVNTYDGTKNVDKTLMGAARMLGANERQVFTRVVLPSAVP 187 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 + + ++++ GW VVA+EMI + G+G I + + + + I+ ++ + Sbjct: 188 YIFAGLQIAITAGWSAVVAAEMIRSDE------GVGWLIVMGMSTGNTIQIMVGIVAIGA 241 Query: 251 VIFLYDQLL 259 + F+ L+ Sbjct: 242 IGFILATLM 250 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 37/197 (18%), Positives = 82/197 (41%), Gaps = 17/197 (8%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++RV+V +IA++ + +G+++G+ + +P + + P + P+ S + + Sbjct: 71 AISLYRVLVAFLIATVAGVFLGVFMGYSRTFEAIFKPLFEFVRPIPPLAWIPM--SILWF 128 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + W ++ G+ +I N G A + + ++LP Sbjct: 129 GIGDESKWF--IIFLGSFTFITVNTYDGTKNVDKTLMGAARMLGANERQVFTRVVLPSAV 186 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL--- 560 PY G A W+A + +E+ G+G I G+ ++++G++ Sbjct: 187 PYIFAGLQIAITAGWSAVVAAEMIR------SDEGVGWLIVMGMSTGNTIQIMVGIVAIG 240 Query: 561 ----IMCCFVLALNRFL 573 I+ + AL R L Sbjct: 241 AIGFILATLMSALERRL 257 >gi|188583387|ref|YP_001926832.1| ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179346885|gb|ACB82297.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium populi BJ001] Length = 283 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + A ++ + +G+ IG + P ++L PA + PL + Sbjct: 89 SLARVLSGFLAALVVGVALGLAIGRSRFARDLLWPPLEVLRPIPAVAWIPLAILMFPSSE 148 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ ++ + G + IL N + G + A S R +ILPG P Sbjct: 149 VS----MAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGATPS 204 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 VTGA G AW + +E+ S + G+G + ES ++ ++V+G+L++ Sbjct: 205 IVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLI 255 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 15/202 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +LP + + R+LS + +L+ +SR +L P L++++ IP + ++ Sbjct: 81 ALPTHLGASLARVLSGFLAALVVGVALGLAIGRSRFARDLLWPPLEVLRPIPAVAWIPLA 140 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F + +E++ F FT ++ + + + ++ L +RS Sbjct: 141 ILMFPS--------SEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAI 192 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P + P +V + M WF +V +EMI G GIG + + Q+ Sbjct: 193 LREVILPGATPSIVTGAAIGMGTAWFCLVTAEMI-SGQY-----GIGYFTWESYTLQNYD 246 Query: 240 AILYAMLTMLGVIFLYDQLLFR 261 I+ ML ++GV+ + L+ R Sbjct: 247 DIVVGML-LIGVLGMGSSLIVR 267 >gi|19224203|gb|AAL86439.1|AF475089_2 transmembrane protein OtaB [Methanosarcina mazei Go1] Length = 277 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 14/108 (12%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF-TSQVWNMTFSMYQS 157 VL PILD+MQ++P +L +++F G V G +FA+ T ++ N+ Sbjct: 126 VLKPILDLMQTMPSFVYLIPALIFF---GLGNVPGMIATLVFAMPPTIRLTNL------G 176 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 + +PR+L+EV+ +F + WQK + +P ++P G+ +M+S+S Sbjct: 177 IRQVPRELKEVADAFGSTPWQKLVKVELPAALPTIMAGVNQCIMLSLS 224 >gi|253686433|ref|YP_003015623.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753011|gb|ACT11087.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 264 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 15/143 (10%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A IF + ++ + + Y + NI R L E++RS+ LSG F+ + +P ++P ++ Sbjct: 124 EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFYQVVLPGALPSIMV 183 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248 + ++ W ++V +T+ GIG Y+A+ +E D++ ILYA+L Sbjct: 184 GIRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGK 236 Query: 249 LGVIFLYDQLLFRPMIVWSNKFR 271 L I Q L R + W+ ++ Sbjct: 237 LADI--SAQGLERIWLRWNPAYQ 257 >gi|299821177|ref|ZP_07053065.1| ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299816842|gb|EFI84078.1| ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 255 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 +++ QP ++ P F V++ V HL + ++ LM+F I N+ G Sbjct: 85 LTALFQPLVSMMKVTPVASFTMFVLAFVQSSHLP--MIVAFLMVFPV---IYGNMQKGLQ 139 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E+A F + W+ R I P ++P++ T G AW A I +EV Sbjct: 140 NVDPALLEMAGIFEFSHWQRLRTIYFPAVYPFFYAAFQTGIGYAWKAGITAEV 192 >gi|92114025|ref|YP_573953.1| binding-protein-dependent transport systems inner membrane component [Chromohalobacter salexigens DSM 3043] gi|91797115|gb|ABE59254.1| binding-protein-dependent transport systems inner membrane component [Chromohalobacter salexigens DSM 3043] Length = 276 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 36/164 (21%), Positives = 81/164 (49%), Gaps = 21/164 (12%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A ++++ + AA S R +++P+LD MQ++P +L + +F Sbjct: 101 ATFVAVIIALPFGVFAALSDRFYSLIMPVLDFMQTMPAFVYLIPAIPFF----------- 149 Query: 135 ELAAIFAIFTSQVWNMTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + ++ AIF + +++M ++ + +P+DL E + +F + QK + +P S+P Sbjct: 150 GIGSVSAIFATVIFSMPPAIRFTTLGIRQVPKDLIEAADAFGATRSQKLIKIQLPLSLPT 209 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 ++ + ++ ++A M+V+ +I G+GS + AI+ Sbjct: 210 IMAGINQTI------MLALSMVVIA-AMIGADGLGSEVWRAIQR 246 >gi|107025553|ref|YP_623064.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116693264|ref|YP_838797.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|170737468|ref|YP_001778728.1| choline ABC transporter, permease protein [Burkholderia cenocepacia MC0-3] gi|105894927|gb|ABF78091.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116651264|gb|ABK11904.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|169819656|gb|ACA94238.1| choline ABC transporter, permease protein [Burkholderia cenocepacia MC0-3] Length = 298 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|125975273|ref|YP_001039183.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum ATCC 27405] gi|256003068|ref|ZP_05428060.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 2360] gi|281419262|ref|ZP_06250278.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum JW20] gi|125715498|gb|ABN53990.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum ATCC 27405] gi|255992759|gb|EEU02849.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 2360] gi|281407128|gb|EFB37390.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum JW20] gi|316939435|gb|ADU73469.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 1313] Length = 302 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 11/182 (6%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IP + IG++ + + P ++L P V+ P ++ + + + ++ G Sbjct: 129 IPSALVIGWKKRLYKAVNPLTKVLGPIPPIVYIPYAIAILPTFKAAS----TFIIFIGAF 184 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N + G + A + + +ILP P ++GA ++ Sbjct: 185 WPVFINTLNGVFNVDKRIIDSAKALSVNEGSMLFQVILPATLPSIISGATVGLVMSFILL 244 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 +E+ T+GLG Y+ ++ +P V+ G++ + V + FL+ + Y Sbjct: 245 TAAEMIG------ATSGLGWYVKYFSDFADYPRVIAGIIFIGVVVTGVT-FLFDKIERYL 297 Query: 582 TR 583 R Sbjct: 298 LR 299 >gi|220903841|ref|YP_002479153.1| phosphate ABC transporter inner membrane subunit PstC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868140|gb|ACL48475.1| phosphate ABC transporter, inner membrane subunit PstC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 296 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 11/148 (7%) Query: 81 LFTFVYATLAAKS--RRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAE 135 + T VY T A RR V+ P ++++ ++P +LGFL V+ F+ Y G G Sbjct: 89 VLTAVYLTEIAHPAVRR---VIKPFVELLAALPSVVLGFLGMVVLAPFLQDYLGAATGLN 145 Query: 136 L--AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 L A++ F S V + +L ++PRDL E S + + WQ + +P ++ G+ Sbjct: 146 LLNASVVLAFMS-VPTICSVSEDALYSVPRDLREASLALGATRWQTTVRVVIPAALSGIG 204 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +M+ MS + M+ G +IP Sbjct: 205 TAVMLGMSRAIGETMVVLMVAGGAGIIP 232 >gi|207722426|ref|YP_002252862.1| transmembranee protein [Ralstonia solanacearum MolK2] gi|206587605|emb|CAQ18187.1| transmembranee protein [Ralstonia solanacearum MolK2] Length = 298 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N AG + N + V ++ ++G + I++P FP +TG AW Sbjct: 173 WAVSLNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTL 232 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 I SE+ + GLG YI E+ PEV G+L + L + ++ L Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 93 SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 RLG + L M +P + L +V+F L G ++ F I S VW ++ Sbjct: 125 GNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLV-------FVIVHSVVWAVS 176 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ L V R++ LSG + +P + P ++ + + + W ++ASE Sbjct: 177 LNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263 ++ G+G YI + ++LL I +LT++ + L + L+FR + Sbjct: 237 LVF--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 >gi|116494444|ref|YP_806178.1| ABC-type phosphate transport system, permease component [Lactobacillus casei ATCC 334] gi|116104594|gb|ABJ69736.1| phosphate ABC transporter membrane protein 1, PhoT family [Lactobacillus casei ATCC 334] Length = 307 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 36/170 (21%), Positives = 82/170 (48%), Gaps = 6/170 (3%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIP--IL 113 +V +LP + LSA++ + + SR+ G +L P+++++ IP + Sbjct: 79 EVGALPMIVGSFGVTFLSAIIATPFAVGAGIFMTEISRKWGQKILQPVIELLVGIPSVVY 138 Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 GF+ +V+ + +++ G G LA F +F + +T +L +PR E S + Sbjct: 139 GFIGLSVIVPFIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLA 197 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ + + + ++PG++ ++ M+ + +A +M++ ++P Sbjct: 198 LGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLP 247 >gi|289193148|ref|YP_003459089.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus sp. FS406-22] gi|288939598|gb|ADC70353.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus sp. FS406-22] Length = 269 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 9/191 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+ ++AS + IP+GI +G+ I+S +LL P + PL ++++ Sbjct: 75 VSIKRVLGGFLLASAVAIPLGILMGYYRTINSLCDTLIELLRPIPPLAWVPL---SLAWF 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L + + ++ G + IL N I+G + P E A + G +++P P Sbjct: 132 GLG-EMSMIFIIFIGAFFPILINTISGVKSVPTPLIEAALTLGAKGRDILIKVVIPASSP 190 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG G AW + +E+ + GLG I + V+ ++I+ Sbjct: 191 SILTGLRVGAGIAWMCVVAAEMLPSSN-----AGLGYLIMYAYSLSRMDVVIACMIIIGL 245 Query: 565 FVLALNRFLWH 575 L L+R L + Sbjct: 246 IGLVLDRGLRY 256 >gi|229846444|ref|ZP_04466552.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 7P49H1] gi|229810537|gb|EEP46255.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 7P49H1] Length = 245 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 22/210 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ T L + +++ LF + A L + SR++ +L+PIL I Q+IP+ V++ Sbjct: 52 QHTQVTVLEICLGLLLGFLFGLISALLLSFSRQISALLLPILVISQAIPVFAIAPLLVLW 111 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K++ + L F + T + Y L N P+ +++++F +S + Sbjct: 112 FGYGMASKIVMSVLIIYFPV--------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLK 163 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P + +++S VA VVG+ V G+G Y+ + + + ++ Sbjct: 164 VRLPAALPAFASGLRIAVS------VAPIGTVVGEWVGSSEGLG-YLMIHANARMQVDLM 216 Query: 243 YAMLTMLGVI-----FLYDQLLFRPMIVWS 267 +A L +L I F D LL R +WS Sbjct: 217 FAALLILVAISLCLYFSIDWLLHR--FIWS 244 >gi|148257774|ref|YP_001242359.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409947|gb|ABQ38453.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 269 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV IA+++ + +G+ IG+ I I+P Q+L P + PL + + Sbjct: 72 SLSRVAAGFAIATVLGVALGVAIGWSRRIEIVIEPTLQMLRPIPPVSWIPLAIIWFGIAN 131 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P ++L L F + IL N I G + + + + + RYI++P P Sbjct: 132 -KPAIFLVFLGAF---FPILLNTIHGVKSCDRNLIRAGAMVGGSERKLLRYIVVPAAMPS 187 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 G G AW ++ +E+ + Sbjct: 188 IFAGLRIGIGSAWMLTVTAEMVA 210 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 8/123 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+ +V+ P L +++ IP + ++ +++F A AIF +F + + Sbjct: 97 SRRIEIVIEPTLQMLRPIPPVSWIPLAIIWFGI--------ANKPAIFLVFLGAFFPILL 148 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + + R+L S + Y+ VP +MP + + + + W V +EM Sbjct: 149 NTIHGVKSCDRNLIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIGIGSAWMLTVTAEM 208 Query: 213 IVV 215 + V Sbjct: 209 VAV 211 >gi|90577630|ref|ZP_01233441.1| ABC-type proline/glycine betaine transport system, permease component [Vibrio angustum S14] gi|90440716|gb|EAS65896.1| ABC-type proline/glycine betaine transport system, permease component [Vibrio angustum S14] Length = 280 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L ++A L ++ PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPIGIMSAHRPWLYTLMRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P DL E ++F S + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEDLIEAGKAFGASRMKLLL 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAAMPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275 >gi|284045544|ref|YP_003395884.1| binding-protein-dependent transporters inner membrane component [Conexibacter woesei DSM 14684] gi|283949765|gb|ADB52509.1| binding-protein-dependent transport systems inner membrane component [Conexibacter woesei DSM 14684] Length = 273 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/224 (20%), Positives = 85/224 (37%), Gaps = 27/224 (12%) Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY---QDVLYVIWLGCI------- 385 NQR++ +L + V + + W+ G +HF DV +W G Sbjct: 20 DNQRLTGIL----LRTMSIVVLLLVWEWYGSDPDHFATPPPSDVFPAMWDGITSGRLIEA 75 Query: 386 ---TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 T+ V + I+ ++ + +G+ I P + I P A P + P V+ + Sbjct: 76 TLGTLTTVFTGVGISIVLGVALGLAIALFPWARNTIDPLIDAAYAMPVTMLIP-VIGVYT 134 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 +++ + + I+ + G P D E +F + G WR ++LP Sbjct: 135 GLDFRGRVFIVITYVL---LVIVMSTATGVRDVPRDLMETGRAFGLRGRALWRAVVLPSA 191 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + +G T ++ +E + L + LGA I ES Sbjct: 192 SSHIASGVATGVARGMRGAVTAE------LLLIASDLGALILES 229 >gi|262374484|ref|ZP_06067758.1| nitrate ABC transporter, permease [Acinetobacter junii SH205] gi|262310480|gb|EEY91570.1| nitrate ABC transporter, permease [Acinetobacter junii SH205] Length = 263 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/187 (22%), Positives = 86/187 (45%), Gaps = 23/187 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR +L L ++++IP L + +++F K+ + F I+ Sbjct: 93 GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGIDETAKLFLVAVGVFFPIY------- 145 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Y + ++ L E+ +S+ LS WQ + + +P +MP ++ S+ W Sbjct: 146 -INTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGFRFSLGLVWV----- 199 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264 +++V +T+ GIG Y+ + +E D++ + LYA+L L +F Q+L R ++ Sbjct: 200 -LLIVAETISAQSGIG-YMTMNAREFLQTDIVLVGILLYALLGKLADVF--AQILERYLL 255 Query: 265 VWSNKFR 271 W ++ Sbjct: 256 RWHAGYQ 262 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + I N G + E+ Sbjct: 107 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 162 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ ++ W+ ++ IILPG P + G + G W IV+E S +G+G Sbjct: 163 GKSYGLSRWQLYKEIILPGAMPSILVGFRFSLGLVWVLLIVAETIS------AQSGIGYM 216 Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRFL--WHPLY 578 + E V++G+L+ F L R+L WH Y Sbjct: 217 TMNAREFLQTDIVLVGILLYALLGKLADVFAQILERYLLRWHAGY 261 >gi|152968886|ref|YP_001333995.1| taurine transporter subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262042373|ref|ZP_06015535.1| taurine uptake ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330006842|ref|ZP_08305719.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150953735|gb|ABR75765.1| taurine transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259040281|gb|EEW41390.1| taurine uptake ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535723|gb|EGF62167.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 275 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I +PVGI +G + + P +L P + PL+V Sbjct: 81 AASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + +ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|117619242|ref|YP_857864.1| glycine betaine/L-proline ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560649|gb|ABK37597.1| glycine betaine/L-proline ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 383 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+++ +L L A+S RL P+LD MQ+ P +L V+ F G V Sbjct: 172 LTSLFFCVLIGLPVGILLARSERLSRWTRPLLDAMQTTPAFVYLIPIVMLF---GIGNVP 228 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G + IFA+ M + +P DL E + SF S Q + + +P +MP Sbjct: 229 GVVVTVIFALPP-----MIRLTMLGIRQVPADLVEAAHSFGASPSQLLFKVQLPLAMPTI 283 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +M+++S VV + MI VG G+G + I D+ Sbjct: 284 MAGVNQTLMLALS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 322 >gi|322387524|ref|ZP_08061133.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus infantis ATCC 700779] gi|321141391|gb|EFX36887.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus infantis ATCC 700779] Length = 305 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 5/133 (3%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVW 148 S + +L P ++++ IP + GF+ VV + ++ G G L+ IF +F + Sbjct: 111 SPKGAKILQPAIELLVGIPSVVYGFIGLQVVVPFVRTVFGGTGFGI-LSGIFVLFVMILP 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +TF SL +PR E S + + WQ W + + + G+ ++ M+ + + Sbjct: 170 TVTFMTTDSLRAVPRHYREASLAMGATRWQTIWRVTLKAARSGIFTAVVFGMARAFGEAL 229 Query: 209 ASEMIVVGDTVIP 221 A +M+V V+P Sbjct: 230 AIQMVVGNSAVVP 242 >gi|238893295|ref|YP_002918029.1| taurine transporter subunit [Klebsiella pneumoniae NTUH-K2044] gi|238545611|dbj|BAH61962.1| taurine transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 275 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I +PVGI +G + + P +L P + PL+V Sbjct: 81 AASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + +ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|167042039|gb|ABZ06775.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_141F21] Length = 295 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L +KS R ++P+LD+MQ+IP +L V M L GKV G I+A+ Sbjct: 122 GVLMSKSDRAEKTILPVLDMMQTIPSFVYL---VPILMLLGIGKVPGLIAVCIYAV--PP 176 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 + +T + + ++ E +F + WQ+ + +P ++P G+ +MM+++ Sbjct: 177 IIRLT---NLGIREVDKETLEAIDAFGATTWQRLTKVQIPLALPTIFAGVNQTIMMALA- 232 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV ++I + G+G I AI Q L L L ++ + ++D++ Sbjct: 233 ----------MVVIASMIGVKGLGVPILRAISNQYLALGLMNGLAIVALAIIFDRV 278 >gi|50122424|ref|YP_051591.1| glycine betaine transporter membrane protein [Pectobacterium atrosepticum SCRI1043] gi|49612950|emb|CAG76401.1| glycine betaine/L-proline transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 393 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R + P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 209 ARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 263 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 264 TI---LGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 316 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 317 VVIASMIAVG-------GLGQMVLRGIGRLDM 341 >gi|192362106|ref|YP_001982720.1| ABC transporter permease [Cellvibrio japonicus Ueda107] gi|190688271|gb|ACE85949.1| ABC transporter, permease protein [Cellvibrio japonicus Ueda107] Length = 266 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 15/172 (8%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +S R+ L+P L++++ IP + ++ ++ F + +EL+ IF FT ++ + Sbjct: 96 RSHRVESFLLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMIFITFTGALFPIL 147 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + + L ++S S + +P + P ++ + + M WF +V +E Sbjct: 148 LNTIHGVEAVDKRLIASAKSLGASASAILREVILPGAAPSIITGLTIGMGTSWFCLVTAE 207 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 MI G GIG Y + Q+ I+ ML ++GV+ + LL + + Sbjct: 208 MI-SGQW-----GIGYYTWESYVIQNYADIVVGML-LIGVLGMGSSLLVKTL 252 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 19/157 (12%) Query: 411 RPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYILFN 467 R H + S + P ++L PA + PL + + P+ LS++ I G + IL N Sbjct: 96 RSHRVESFLLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMIFITFTGALFPILLN 149 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 I G A A S + R +ILPG P +TG G +W + +E+ Sbjct: 150 TIHGVEAVDKRLIASAKSLGASASAILREVILPGAAPSIITGLTIGMGTSWFCLVTAEMI 209 Query: 528 S--WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 S W G+G Y ES ++ ++V+G+L++ Sbjct: 210 SGQW--------GIGYYTWESYVIQNYADIVVGMLLI 238 >gi|46202251|ref|ZP_00053506.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 264 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 11/119 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +RRL + P L +++IP + ++ +++F KVI + F I+ Sbjct: 97 ARRL---IDPTLQALRNIPSIAWVPMFILWFGIFETSKVILIAVGVFFPIY--------L 145 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 S+ ++ + R L EV R FR S + + +P ++P V ++ + GW FVVA+E Sbjct: 146 SLSGAILGVDRKLVEVGRIFRFSHAEMITRILLPATLPAYVISLRSGLGLGWMFVVAAE 204 >gi|298291048|ref|YP_003692987.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296927559|gb|ADH88368.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 249 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 6/137 (4%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAI A+ +++ N+ +M + + RDL+E++R +RL + + +P +P Sbjct: 118 EAAAITAVAINKIPNVAVTMREGAAALSRDLDEMARVYRLPRLKALREVTLPQLVPFFAA 177 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++ W V+ E++ + G+G + A + D+ IL L V+ L Sbjct: 178 SARSGLALTWKIVLVVELLGRSN------GVGFELQTAFQLFDVATILAYALAFTAVVQL 231 Query: 255 YDQLLFRPMIVWSNKFR 271 + L +P +N++R Sbjct: 232 IELGLLQPWERRANRWR 248 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 10/157 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 IT+ RV +IA I +GI +G ++ P+ +L PA V +++ C + Sbjct: 57 AITLARVAASFLIAMAIGSAIGIALGRSVQLNELFGPWVVVLLNLPALV---VIILCYVW 113 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L ++ + I + + GA+A D E+A + + + R + LP + Sbjct: 114 FGLTEAAAITAVAINKIP-NVAVTMREGAAALSRDLDEMARVYRLPRLKALREVTLPQLV 172 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 P++ A + W +V E+ R+ G+G Sbjct: 173 PFFAASARSGLALTWKIVLVVELLG------RSNGVG 203 >gi|206578569|ref|YP_002240175.1| taurine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288936921|ref|YP_003440980.1| binding-protein-dependent transporters inner membrane component [Klebsiella variicola At-22] gi|290510022|ref|ZP_06549392.1| taurine transporter subunit [Klebsiella sp. 1_1_55] gi|206567627|gb|ACI09403.1| taurine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288891630|gb|ADC59948.1| binding-protein-dependent transport systems inner membrane component [Klebsiella variicola At-22] gi|289776738|gb|EFD84736.1| taurine transporter subunit [Klebsiella sp. 1_1_55] Length = 275 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+V+ ++ A +I +PVGI +G + + P +L P + PL+V Sbjct: 81 AASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + +ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAARSLGASRAQVLWLVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|206564248|ref|YP_002235011.1| putative glycine-betaine ABC transporter permease [Burkholderia cenocepacia J2315] gi|198040288|emb|CAR56273.1| putative glycine-betaine binding ABC transporter permease protein [Burkholderia cenocepacia J2315] Length = 298 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|78061306|ref|YP_371214.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Burkholderia sp. 383] gi|77969191|gb|ABB10570.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Burkholderia sp. 383] Length = 298 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|27381311|ref|NP_772840.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354478|dbj|BAC51465.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 245 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 6/113 (5%) Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G A E+AS F + WR +R+++LP + PY A + W +V+E+ Sbjct: 133 GTRALDRSLDEMASVFAMPRWRAFRHVVLPQLAPYIAASARSGLSLVWKIVLVAELLG-- 190 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 R G+G I + + P ++ L VL + L P TR Sbjct: 191 ----RPNGVGFEIGVAFQLFDTPRLLAYSLTFAAVVLVIETVLVQPFEARATR 239 >gi|167743016|ref|ZP_02415790.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|254183828|ref|ZP_04890420.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|184214361|gb|EDU11404.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 300 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ ++SL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|330809284|ref|YP_004353746.1| taurine ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377392|gb|AEA68742.1| Taurine ABC transporter permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 249 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/229 (18%), Positives = 97/229 (42%), Gaps = 14/229 (6%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D+ L SL Q+ + L + +++ T A S R + P+ Sbjct: 35 PWDVAREALRWLGDRSLLQHLQASVLEEVGGFCAAVIVAIALGTGAGLSSRFRDFISPLN 94 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 + +IP + + ++ F Y ++ + IF + ++ M ++ + + +I Sbjct: 95 SLFMAIPPIAWAPLIMIIFGLGY--------VSIVLVIFIAAMFPMAVTIQEGVQSIRGG 146 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 +R+ + WQ ++ +P S+P + + + S GW +VA+EMI G Sbjct: 147 EVRAARTLGANAWQLLAHVYLPASLPFVTAALRIGFSQGWRALVAAEMIGASQ------G 200 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 IG ++ + + +L ++ + + +L + +FR + K+R++ Sbjct: 201 IGWMVSTGGQIGNSSQVLLGIVVIGLIAWLMESFVFRRIERHYQKWRVQ 249 >gi|260771576|ref|ZP_05880496.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio metschnikovii CIP 69.14] gi|260613353|gb|EEX38552.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio metschnikovii CIP 69.14] Length = 279 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 89 QEMLETFVLVFAATTISVLIGVPIGIMAAHRAWLYTLLRPILDLMQTVPTFVYLIPTLVL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 149 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTRVPEELLEAGKAFGASKMKLLF 199 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P ++P G+ +M+S+S Sbjct: 200 KVELPAALPSIMAGITQCIMLSLS 223 >gi|238023929|ref|YP_002908161.1| choline ABC transporter membrane-spanning permease [Burkholderia glumae BGR1] gi|237878594|gb|ACR30926.1| ABC transporter membrane-spanning permease - choline transporter [Burkholderia glumae BGR1] Length = 297 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGVWAAKSKWVSAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|145294562|ref|YP_001137383.1| hypothetical protein cgR_0513 [Corynebacterium glutamicum R] gi|140844482|dbj|BAF53481.1| hypothetical protein [Corynebacterium glutamicum R] Length = 267 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 17/172 (9%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P L + +IP + +V+F + KV A A F + + + L Sbjct: 107 LYPALVAIDTIPKVALAPLFIVWFGFGFESKVFVAMAIAFFP--------LVINTFDGLS 158 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 ++P +L+E++R R + WQ+ + +++P + M +S+S +A VVG+ + Sbjct: 159 SVPHELKELARINRATTWQRLSKIEFIYAVPSIFSGMKISIS------LAVGGAVVGEFI 212 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGV---IFLYDQLLFRPMIVWSN 268 G+G I LA + DL ++ A + + + +F L + ++ W Sbjct: 213 SGSKGLGYVILLANSQVDLASMFAAFIVLASISLALFYAVDLAAKRLVPWKT 264 >gi|113868219|ref|YP_726708.1| ABC transporter permease [Ralstonia eutropha H16] gi|113526995|emb|CAJ93340.1| ABC-type transporter, permease component: TauT family [Ralstonia eutropha H16] Length = 267 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + E+ Sbjct: 110 QMVRNIPALALIPLVIL---WFGIDETAKL-FLVSLGVFFPVYLNTYHGIRSVDTGLVEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ ++GW+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 ARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWVVLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCC-------FVLALNRF--LWHPLY 578 + E V++G+L+ L R+ WHP Y Sbjct: 220 TMNAREFLQTDVVLVGILLYALLGKLADWLSRGLERYWLRWHPGY 264 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 68/142 (47%), Gaps = 15/142 (10%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R +L L ++++IP L + +++F K+ L F ++ + Sbjct: 99 RTAATLLDSSLQMVRNIPALALIPLVILWFGIDETAKLFLVSLGVFFPVY--------LN 150 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y + ++ L E++RS+ LSGWQ + + +P ++PG++ + ++ W ++ Sbjct: 151 TYHGIRSVDTGLVEMARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWV------VL 204 Query: 214 VVGDTVIPLPGIGSYIALAIKE 235 +V +T+ GIG Y+ + +E Sbjct: 205 IVAETISAQSGIG-YMTMNARE 225 >gi|90418107|ref|ZP_01226019.1| permease protein, ABC-type proline/glycine betaine transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337779|gb|EAS51430.1| permease protein, ABC-type proline/glycine betaine transporter [Aurantimonas manganoxydans SI85-9A1] Length = 295 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/201 (22%), Positives = 98/201 (48%), Gaps = 31/201 (15%) Query: 67 RTTLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS +V+ L + + ++S ++ V+ PILD+MQ++P +L V+ Sbjct: 98 EDTMRTLSIIVVCTLMSIIIGMPIGIIMSRSNKVQAVINPILDVMQTMPSFVYLIPIVML 157 Query: 123 F-MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + L PG ++ I+A+ ++ N+ + + +++ E + +F SGWQK Sbjct: 158 LGIGLIPGLLV----VVIYAMPPIIRLTNLGIRL------VDKEVLEAANAFGSSGWQKL 207 Query: 181 WYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P ++P G+ +MM+++ M+VV ++I + G+G + AI Q Sbjct: 208 TQVQLPLALPTIMAGINQTIMMALA----------MVVVA-SLIGVRGLGQPVLQAITNQ 256 Query: 237 DLLAILYAMLTMLGVIFLYDQ 257 + L ++ + ++D+ Sbjct: 257 YFTQGVLNGLAIVAIAIIFDR 277 >gi|148976132|ref|ZP_01812875.1| putative permease [Vibrionales bacterium SWAT-3] gi|145964527|gb|EDK29781.1| putative permease [Vibrionales bacterium SWAT-3] Length = 299 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 29/179 (16%) Query: 67 RTTLRMLS----AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS ++S+ A+S R ++ P+LDIMQ++P +L V Sbjct: 101 EDTMRTLSIITVCTLVSIFLGIPIGIAMARSNRAQSIVTPLLDIMQTMPAFVYLIPVV-- 158 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + + +++ E + +F S Q+ W Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASKKQRLW 211 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P +MP G+ +MM++S M+V+ ++I + G+G + +I Q Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259 >gi|53717242|ref|YP_105326.1| putative glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|53722452|ref|YP_111437.1| glycine-betaine binding ABC transporter permease protein [Burkholderia pseudomallei K96243] gi|76817460|ref|YP_335608.1| glycine betaine/L-proline ABC transporter permease [Burkholderia pseudomallei 1710b] gi|124381826|ref|YP_001024716.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126444044|ref|YP_001063021.1| glycine betaine/L-proline ABC transporter permease [Burkholderia pseudomallei 668] gi|126447053|ref|YP_001079051.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126457380|ref|YP_001075966.1| glycine betaine/L-proline ABC transporter permease [Burkholderia pseudomallei 1106a] gi|134282424|ref|ZP_01769128.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167724046|ref|ZP_02407282.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167820188|ref|ZP_02451868.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167828563|ref|ZP_02460034.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167850021|ref|ZP_02475529.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167898630|ref|ZP_02486031.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167906971|ref|ZP_02494176.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167915330|ref|ZP_02502421.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167923164|ref|ZP_02510255.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|217425333|ref|ZP_03456827.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|226199143|ref|ZP_03794705.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237509601|ref|ZP_04522316.1| choline ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242313507|ref|ZP_04812524.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254174383|ref|ZP_04881045.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254186743|ref|ZP_04893259.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254194352|ref|ZP_04900784.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254204020|ref|ZP_04910379.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei FMH] gi|254208998|ref|ZP_04915345.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei JHU] gi|254262955|ref|ZP_04953820.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254355725|ref|ZP_04972005.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|52212866|emb|CAH38900.1| putative glycine-betaine binding ABC transporter permease protein [Burkholderia pseudomallei K96243] gi|52423212|gb|AAU46782.1| putative glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76581933|gb|ABA51407.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|124289846|gb|ABM99115.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126223535|gb|ABN87040.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126231148|gb|ABN94561.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126239907|gb|ABO03019.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134245981|gb|EBA46071.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147744904|gb|EDK51985.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei FMH] gi|147750221|gb|EDK57291.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei JHU] gi|148023818|gb|EDK82880.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|157934427|gb|EDO90097.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|160695429|gb|EDP85399.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|169651103|gb|EDS83796.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|217391584|gb|EEC31612.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|225928918|gb|EEH24943.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|235001806|gb|EEP51230.1| choline ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242136746|gb|EES23149.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254213957|gb|EET03342.1| glycine betaine/L-proline ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 300 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ ++SL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLTSL-----GIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|209516849|ref|ZP_03265699.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209502665|gb|EEA02671.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 288 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+ +L P +++IP L ++ +++ K+ L AI A F Q Sbjct: 115 SRRVDALLDPAFQALRAIPSLAWVPILLLWMGIDEAPKIT---LIAIGAFFPVQ-----L 166 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 S+ + + R L E + RLSG F + +P SMP + + +S W F+VA+E+ Sbjct: 167 SVVAGIHGVDRKLIEFGQLNRLSGRALFTRILLPASMPQIFTGLRTGLSLAWMFMVAAEL 226 Query: 213 IVV 215 I Sbjct: 227 IAA 229 >gi|332974746|gb|EGK11662.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 569 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 29/169 (17%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+A ++S++ L A++R ++ P+LD MQ++P +L V +F Sbjct: 97 VLTATLLSIVIGLPLGILTARNRSSQSLITPVLDFMQTMPAFVYLIPAVFFFA------- 149 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR---DLEEVSRSFRLSGWQKFWYLGVPFS 188 L A+ I S +++M ++ + I + DL E + +F + QK + + +P + Sbjct: 150 ----LGAVPGIIASIIFSMPPTIRLTSLGIRQVSADLIEAADAFGSTSTQKLFKVQLPLA 205 Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 P G+ +M+S+S VV + MI G G+G+ + AI Sbjct: 206 KPTIMAGINQTIMLSLS----MVVIASMIGAG-------GLGTVVLQAI 243 >gi|325519398|gb|EGC98803.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 172 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%) Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYILFNVIAG 471 + + P ++L PA + PL + + P+ LS++ I G + IL N + G Sbjct: 5 LEDTLLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMMFITFVGALFPILLNTVHG 58 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A A A S G + +ILPG P TG G AW + +E+ + + Sbjct: 59 AEAVDPRLVATARSLGTRGLALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAEMIAGQY 118 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G+G + ES ++P++V+G+ ++ Sbjct: 119 ------GIGYFTWESYTLQNYPDIVVGMALI 143 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 8/123 (6%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R L L+P L++++ IP + ++ ++ F + +EL+ +F F ++ + Sbjct: 1 RYRALEDTLLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPIL 52 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + L +RS G + + +P + P + + + M WF +V +E Sbjct: 53 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 112 Query: 212 MIV 214 MI Sbjct: 113 MIA 115 >gi|255261600|ref|ZP_05340942.1| taurine ABC transporter, permease protein [Thalassiobium sp. R2A62] gi|255103935|gb|EET46609.1| taurine ABC transporter, permease protein [Thalassiobium sp. R2A62] Length = 420 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++I IP+G +G P + + P PLV+ ++ Sbjct: 229 SLFRVVVGFFFGALIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVII---WFG 285 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + +L+ W + +G S A S + W+ R++I+P P Sbjct: 286 IGESGKI-ILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKWQLMRHVIIPNSLPE 344 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGA A G W + +E+ + + G G I + + + V++G++++ Sbjct: 345 IFTGARVAMGVCWGTVVAAELVA------ASQGAGMMIMTAAKFQNTDIVIMGIILIGVI 398 Query: 566 VLALNRFL 573 ++ + Sbjct: 399 GFGIDMLM 406 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 19/172 (11%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F GK+I +F + +W M + + + Sbjct: 263 PIVEFMRPVPPLALIPLVIIWFGIGESGKII--------LLFLAALWIMAIAARSGVSGV 314 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ ++ +P S+P + ++M W VVA+E++ Sbjct: 315 NISKVHAAYSLGASKWQLMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAASQ---- 370 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLL---FRPMIVWSNK 269 G G I A K Q+ ++ ++ ++GVI F D L+ R ++ W K Sbjct: 371 --GAGMMIMTAAKFQNTDIVIMGII-LIGVIGFGIDMLMRYAERLLVPWKGK 419 >gi|170734695|ref|YP_001773809.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169820733|gb|ACA95314.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 295 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L + +L F +LA S R+G L+ +L M +P + L +++F L G Sbjct: 102 LLRGYALGVLLAFALTSLAV-STRIGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGS 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + + +W + S+Y +P L+ R++ L+G ++ + VP ++P Sbjct: 160 LL-------FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALP 212 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235 >gi|323488606|ref|ZP_08093850.1| binding-protein-dependent transport systems inner membrane component [Planococcus donghaensis MPA1U2] gi|323397823|gb|EGA90625.1| binding-protein-dependent transport systems inner membrane component [Planococcus donghaensis MPA1U2] Length = 251 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+++ + A +I VGI + + L + P+ V+ PL + ++ L Sbjct: 61 RLLIGLAAAILIGTSVGILLARSKTADDTLGTLVLALQSVPSIVWLPL---AMMWFGLGE 117 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + ++I G + ++ NV G F + A + G + +I+P PY+VT Sbjct: 118 GS-IIFVVILGGTFVMILNVRTGIKNVDPLFIKAARTMGSNGMDLFIKVIIPASVPYFVT 176 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 GA A AW A + E+ S G GLG + +++ G+ +V+GV+I+ V A Sbjct: 177 GARLAWAFAWRALMAGELLSSGP------GLGYTLRYASDFGNM-SLVIGVMIIIGVVGA 229 Query: 569 L 569 + Sbjct: 230 I 230 >gi|227358548|ref|ZP_03842873.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] gi|227161259|gb|EEI46333.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] Length = 409 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 25/169 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 223 AHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 277 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E ++SF + Q + + +P +MP G+ +M+++S Sbjct: 278 TI---LGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 330 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQD--LLAILYAMLTMLGVIF 253 VV + MI VG G+G + I D L A+ A + +L +I Sbjct: 331 VVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIIL 372 >gi|238783149|ref|ZP_04627175.1| Taurine ABC transporter, permease protein [Yersinia bercovieri ATCC 43970] gi|238715945|gb|EEQ07931.1| Taurine ABC transporter, permease protein [Yersinia bercovieri ATCC 43970] Length = 255 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/185 (18%), Positives = 76/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+++ + A + +P GI +G + + + P ++ P + PL+V Sbjct: 63 SLGRILIALFAAVALGVPTGIAMGLSRRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGIGE 122 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + +AG + A + + W+ R+++LP P Sbjct: 123 TS-KILLIYLAIFAP---VTLAAVAGVRSVAEVRVRAAQALGASRWQVLRFVVLPSALPE 178 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 179 ILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAII 232 Query: 566 VLALN 570 + Sbjct: 233 AFGME 237 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 8/121 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+ VL P+++I + +P L +L V++F IG E + I I+ + +T Sbjct: 88 SRRVRAVLDPLIEIYRPVPPLAYLPLMVIWFG-------IG-ETSKILLIYLAIFAPVTL 139 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ +++ S WQ ++ +P ++P ++ + + + GW +VA+E+ Sbjct: 140 AAVAGVRSVAEVRVRAAQALGASRWQVLRFVVLPSALPEILTGIRIGLGVGWSTLVAAEL 199 Query: 213 I 213 I Sbjct: 200 I 200 >gi|28900965|ref|NP_800620.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153836719|ref|ZP_01989386.1| ABC-type proline/glycine betaine transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|260366177|ref|ZP_05778637.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260879819|ref|ZP_05892174.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260894493|ref|ZP_05902989.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|28809411|dbj|BAC62453.1| putative permease of ABC transporter [Vibrio parahaemolyticus RIMD 2210633] gi|149750068|gb|EDM60813.1| ABC-type proline/glycine betaine transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|308086416|gb|EFO36111.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308092739|gb|EFO42434.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308114846|gb|EFO52386.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 280 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGIIKVPEELLEAGKAFGASRMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKAP 275 >gi|222086916|ref|YP_002545450.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84] gi|221724364|gb|ACM27520.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84] Length = 279 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I+ + AG A P D+ A SF + R++ILPG P +TG A G W+ + Sbjct: 162 IILSTAAGVKAAPVDYVNAARSFGAGRLQVLRHVILPGAIPSILTGIRIALGAGWSTLVA 221 Query: 524 SEV--ASWG 530 +E+ AS G Sbjct: 222 AELVAASQG 230 >gi|134292188|ref|YP_001115924.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] gi|134135345|gb|ABO56459.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] Length = 298 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + L P+LD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVAATLRPVLDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|197284311|ref|YP_002150183.1| glycine betaine transporter membrane protein [Proteus mirabilis HI4320] gi|194681798|emb|CAR41030.1| glycine betaine/L-proline ABC transporter, permease protein [Proteus mirabilis HI4320] Length = 409 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 25/169 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 223 AHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 277 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E ++SF + Q + + +P +MP G+ +M+++S Sbjct: 278 TI---LGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 330 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQD--LLAILYAMLTMLGVIF 253 VV + MI VG G+G + I D L A+ A + +L +I Sbjct: 331 VVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIIL 372 >gi|183598093|ref|ZP_02959586.1| hypothetical protein PROSTU_01456 [Providencia stuartii ATCC 25827] gi|188020250|gb|EDU58290.1| hypothetical protein PROSTU_01456 [Providencia stuartii ATCC 25827] Length = 392 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S + ++ PILD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 206 ARSDKAASIVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIIRL 260 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 261 TI---LGIKQVPADLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 313 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 314 VVIASMIAVG-------GLGQMVLRGIGRLDM 338 >gi|86137727|ref|ZP_01056303.1| glycine betaine/proline ABC transporter, permease protein [Roseobacter sp. MED193] gi|85825319|gb|EAQ45518.1| glycine betaine/proline ABC transporter, permease protein [Roseobacter sp. MED193] Length = 683 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 15/137 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI D++Q+IP+ FL ++ F IG E +A AI V M Q L + Sbjct: 528 PICDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAIIAYAVVPMIRYTRQGLIST 579 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P D+ E + + +GWQ + P++ P ++ + ++ + A M+V+ +I Sbjct: 580 PDDMIEAATASGATGWQMMRDVRAPYAAPTILLGLNQTI------LYAFAMLVIA-ALIG 632 Query: 222 LPGIGSYIALAIKEQDL 238 G+G I LA+ + D+ Sbjct: 633 TTGLGQSIYLALGKADV 649 >gi|317491340|ref|ZP_07949776.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920887|gb|EFV42210.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 368 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+ V+ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 183 ARSKGAARVIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 237 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 238 TSLGIQ---QVPADLIEAAESFGSSPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 290 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 291 VVIASMIAVG-------GLGQMVLRGIGRLDM 315 >gi|90422375|ref|YP_530745.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB18] gi|90104389|gb|ABD86426.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB18] Length = 291 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 8/84 (9%) Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 NV G A P D ++ SF + W+ RY+ILP I PY + G A I +E Sbjct: 173 LNVYEGVRALPKDLVDMIESFRPSRWQVLRYLILPHIVPYIFLTTKSVIGYAIRMVIFAE 232 Query: 526 VASWGHIHLRTTGLGAY--IAEST 547 + + G+GA +A+ST Sbjct: 233 LVA------SAVGIGARMNLAQST 250 >gi|150398343|ref|YP_001328810.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150029858|gb|ABR61975.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 263 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 14/173 (8%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A +R + L P+L QSI + ++ +++F + G V+ F I + + Sbjct: 93 ALNRAVSETLTPVLSFFQSIAGIAWVPLAIIWF-GVGKGSVL-------FVIANTIFFAS 144 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 +S + IPR L S S S W + +P +M ++ + SM+ GW +VA Sbjct: 145 IYSTVIGVRTIPRVLFRASLSHGASRWDIISNVVIPGAMVQILVGLRTSMAYGWRALVAG 204 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 EMI D G+G A++ ++ M+ + + L D LLF P+ Sbjct: 205 EMIAGTD------GVGYMTLEAVQWYQAEIVILGMIVIGVLWLLMDALLFTPI 251 >gi|325526331|gb|EGD03937.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Burkholderia sp. TJI49] Length = 269 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 109 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 165 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 218 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA + R WHP Y G + Sbjct: 219 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQSGAKA 269 >gi|312961054|ref|ZP_07775559.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311284712|gb|EFQ63288.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 282 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 25/144 (17%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L P+LD+MQ++P +L T+ F + + PG + +FAI + +T Y + Sbjct: 127 LRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVVFAI--AAPIRLT---YLGI 177 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIV 214 C++P +L + ++F S Q + +P +MP G+ +M+S+S M+V Sbjct: 178 CDVPEELMDAGKAFGCSRRQLLARIELPHAMPSIAAGITQCIMLSLS----------MVV 227 Query: 215 VGDTVIPLPGIGSYIALAIKEQDL 238 + ++ G+G + A+ D+ Sbjct: 228 IA-ALVGADGLGKPVVNALNTADI 250 >gi|260903030|ref|ZP_05911425.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308108320|gb|EFO45860.1| choline ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] Length = 280 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGIIKVPEELLEAGKAFGASRMKLLF 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKAP 275 >gi|91776210|ref|YP_545966.1| binding-protein-dependent transport systems inner membrane component [Methylobacillus flagellatus KT] gi|91710197|gb|ABE50125.1| binding-protein-dependent transport systems inner membrane component [Methylobacillus flagellatus KT] Length = 321 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 10/179 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S++ +P+GI G PF + PA F L V+ + Y P + + + Sbjct: 136 LISSLVGVPLGILAGTWSVAGRLCLPFIEFFRYLPAPAFGALAVAVLGIYE-GPKIAIIV 194 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + F Q I+ N E A + + W+ R++++PG+ P Sbjct: 195 IGTFFQQVLIISNT---TRQLDYALLEAAMTLGTSRWKLLRHVVIPGVLPQLYRDQRILL 251 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G AW IV+E+ ++G+ +I + F V + I+ L+ + L Sbjct: 252 GWAWTYLIVAELIG------TSSGITWFITQQARYEHFDNVYAAIFIIGVIGLSTDMLL 304 >gi|330501438|ref|YP_004378307.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina NK-01] gi|328915724|gb|AEB56555.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina NK-01] Length = 292 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 23/169 (13%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 S+ +ISLL AA+S R+ ++ PILD MQ++P +L + F G+V G Sbjct: 98 SSTLISLLLGIPLGIWAARSERVATIIRPILDFMQTMPAFVYLIPAAMLF---GLGRVPG 154 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP--- 190 IFA+ V + + Q + +++ E +SF + Q + + +P +MP Sbjct: 155 IIATVIFAM-PPAVRLTSLGIRQ----VNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIM 209 Query: 191 -GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 210 AGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 247 >gi|330819748|ref|YP_004348610.1| ABC transporter membrane-spanning permease - choline transporter [Burkholderia gladioli BSR3] gi|327371743|gb|AEA63098.1| ABC transporter membrane-spanning permease - choline transporter [Burkholderia gladioli BSR3] Length = 297 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLVLGIPLGIWAAKSKWVSAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|83745558|ref|ZP_00942616.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|207738911|ref|YP_002257304.1| transmembranee protein [Ralstonia solanacearum IPO1609] gi|83727635|gb|EAP74755.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|206592282|emb|CAQ59188.1| transmembranee protein [Ralstonia solanacearum IPO1609] Length = 298 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N AG + N + V ++ ++G + I++P FP +TG AW Sbjct: 173 WAVSLNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTL 232 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 I SE+ + GLG YI E+ PEV G+L + L + ++ L Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 93 SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 RLG + L M +P + L +V+F L G ++ F I S VW ++ Sbjct: 125 GNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLV-------FVIVHSVVWAVS 176 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ L V R++ LSG + +P + P ++ + + + W ++ASE Sbjct: 177 LNTHAGFQSVSNTLRMVGRNYGLSGMAYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263 ++ G+G YI + ++LL I +LT++ + L + L+FR + Sbjct: 237 LVF--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 >gi|107022795|ref|YP_621122.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116686966|ref|YP_840213.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|105892984|gb|ABF76149.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116652681|gb|ABK13320.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 295 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L + +L F +LA S R+G L+ +L M +P + L +++F L G Sbjct: 102 LLRGYALGVLLAFALTSLAV-STRIGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGS 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + + +W + S+Y +P L+ R++ L+G ++ + VP ++P Sbjct: 160 LL-------FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALP 212 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235 >gi|23098455|ref|NP_691921.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776681|dbj|BAC12956.1| glycine betaine ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 276 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 23/200 (11%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + A +T ++ A ++SL+ L+A + + ++ PILD MQ++P +L V+ Sbjct: 88 EGAMQTLAIIIVATLVSLVIGIPVGILSAMNDGVQRIVRPILDFMQTLPSFVYLIPAVLL 147 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F +G + A+ A F + ++P+++ E SR+F + Q + Sbjct: 148 FG-------LGG-VPAVMATFIFAAPPAVRMTNLGIRSVPKEIVEASRAFGSTNKQLLYK 199 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++P G+ +M+S+S VVAS +I PG+G+ + AI + ++ Sbjct: 200 VQIPLAIPSIMAGVNQTIMLSLS---MAVVAS--------MIGAPGLGASVLTAISQVNI 248 Query: 239 LAILYAMLTMLGVIFLYDQL 258 L A L ++ + + D++ Sbjct: 249 GLGLVAGLGIVVLAIVLDRI 268 >gi|86146033|ref|ZP_01064360.1| putative permease [Vibrio sp. MED222] gi|85836238|gb|EAQ54369.1| putative permease [Vibrio sp. MED222] Length = 299 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 25/151 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R ++ P+LDIMQ++P +L V M L GK+ G I+AI ++ N Sbjct: 129 ARSNRAQSIVTPMLDIMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ W + +P +MP G+ +MM++S Sbjct: 186 LGIRL------VDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS---- 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 M+V+ ++I + G+G + +I Q Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQ 259 >gi|107028482|ref|YP_625577.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116686477|ref|YP_839724.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|105897646|gb|ABF80604.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116652192|gb|ABK12831.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 238 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + +I +IP L L + F IG + AI A+F + + +T + Y+ + N+P Sbjct: 82 VFNIGNTIPSLAVLAIALGIFG-------IG-NVPAIVALFLASLLPVTRNAYEGMKNVP 133 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 L E ++ ++GWQ + +P ++P +V + +++ Sbjct: 134 AALREAAKGIGMTGWQSLLRVELPNALPIIVGGVRTALA 172 >gi|330956993|gb|EGH57253.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 281 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ ++ +AA ++ PILD+MQ++P +L T+ Sbjct: 89 QETMETLAQVLFATLVCVVIGVPLGIIAAHKPMFYTIIRPILDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P++MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273 >gi|118593747|ref|ZP_01551116.1| Binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] gi|118433657|gb|EAV40320.1| Binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] Length = 283 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%) Query: 69 TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TLR+ L +S + + A AKSR L P+L ++QS+P++ +V Sbjct: 89 TLRVALIGYAVSFVISLPIAVGLAKSRLLSGAFYPLLVVIQSVPVVAVAPIIIV------ 142 Query: 128 PGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 V+G + + F + + SM L P +L E+SRS R +++ + +P Sbjct: 143 ---VLGTGDAPRVVITFMISFFPLVVSMTTGLAATPPELIELSRSLRAPSFREITQIRLP 199 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI---KEQDLLAILY 243 ++ P + M +S++ V SE + GIG +I + K A L Sbjct: 200 YATPYIFSGMKISITLSVIGAVVSEFVAAEK------GIGYFIQFSTSMFKLPQAWAGLV 253 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWS 267 ++ M V+F LL R WS Sbjct: 254 ILVIMSLVLFQLVSLLQRVFFPWS 277 >gi|159897592|ref|YP_001543839.1| ornithine carbamoyltransferase [Herpetosiphon aurantiacus ATCC 23779] gi|159890631|gb|ABX03711.1| Ornithine carbamoyltransferase [Herpetosiphon aurantiacus ATCC 23779] Length = 293 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 12/108 (11%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA-AIFAIFTSQV-WNMTFSMY- 155 V++P D++ ++ +LGF T F L IG LA ++ + S V +N++F Sbjct: 130 VIIP--DVVMAVSLLGFFTLAFRQFQAL-----IGLNLAMGLWTVIISHVAFNISFVTVV 182 Query: 156 --QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 SL N R LEE + + WQ FW + P PG++ ++S + Sbjct: 183 VGTSLANFDRRLEEAAADLGATPWQTFWRIKFPLIGPGVLGGALLSFT 230 >gi|289672390|ref|ZP_06493280.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] gi|302188551|ref|ZP_07265224.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] gi|330898813|gb|EGH30232.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. japonica str. M301072PT] gi|330938581|gb|EGH42155.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. pisi str. 1704B] gi|330979968|gb|EGH78238.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 281 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ ++ +AA ++ PILD+MQ++P +L T+ Sbjct: 89 QETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRPILDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P++MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273 >gi|191637829|ref|YP_001986995.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus casei BL23] gi|227535592|ref|ZP_03965641.1| phosphate ABC superfamily ATP binding cassette transporter, membrane-spanning subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631193|ref|ZP_04674224.1| ABC-type phosphate transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065954|ref|YP_003787977.1| phosphate ABC transporter permease [Lactobacillus casei str. Zhang] gi|190712131|emb|CAQ66137.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus casei BL23] gi|227186722|gb|EEI66789.1| phosphate ABC superfamily ATP binding cassette transporter, membrane-spanning subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525658|gb|EEQ64659.1| ABC-type phosphate transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438361|gb|ADK18127.1| ABC-type phosphate transport system, permease component [Lactobacillus casei str. Zhang] gi|327381895|gb|AEA53371.1| Phosphate ABC transporter, inner membrane subunit PstC [Lactobacillus casei LC2W] gi|327385056|gb|AEA56530.1| Phosphate ABC transporter, inner membrane subunit PstC [Lactobacillus casei BD-II] Length = 307 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 36/170 (21%), Positives = 82/170 (48%), Gaps = 6/170 (3%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIP--IL 113 +V +LP + LSA++ + + SR+ G +L P+++++ IP + Sbjct: 79 EVGALPMIVGSFGVTFLSAIIATPFAVGAGIFMTEISRKWGQKILQPVIELLVGIPSVVY 138 Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 GF+ +V+ + +++ G G LA F +F + +T +L +PR E S + Sbjct: 139 GFIGLSVIVPFIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLA 197 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ + + + ++PG++ ++ M+ + +A +M++ ++P Sbjct: 198 LGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLP 247 >gi|111017295|ref|YP_700267.1| ABC transporter, permease component [Rhodococcus jostii RHA1] gi|110816825|gb|ABG92109.1| ABC transporter, permease component [Rhodococcus jostii RHA1] Length = 287 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 19/209 (9%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R+++ + + I + +G +G + Q+L A P PL+++ Sbjct: 89 TVSLRRILIGFTLGASIGLVLGFVVGLSRIAEGLVDRTLQMLRALPHLALVPLLIAAFGI 148 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L + ++L +IF + N +AG ++ S+ + R II+PG Sbjct: 149 GELPKVVLVTLGVIF----PVYLNTVAGIRTVDPKLVQLGESYGLGRGARIRDIIVPGAM 204 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G AW +++E + + G+G + +VL +L+ Sbjct: 205 PMILTGIRYALGVAWLTLVIAETIAT------SEGIGFLAQNGRDMLRNDRIVLAILLYA 258 Query: 564 CFVLALNR---------FLWHPLYLYGTR 583 L ++ W+P Y G R Sbjct: 259 VAGLLADQITRLIEARVLRWNPHYQGGNR 287 >gi|319793147|ref|YP_004154787.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315595610|gb|ADU36676.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 268 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 18/179 (10%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +A+I + +G+ IG + P ++L PA + PL + Sbjct: 73 SLRRVFIGFGLAAIAGVALGLAIGRARWAEDTLLPPLEVLRPIPAVAWIPLAI------L 126 Query: 446 LNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPG 501 + P+ S++ I G + +L N + G A D + VAS+ + R +R +ILPG Sbjct: 127 MFPSSEASMVFITFIGALFPVLLNTVHGVEAV--DARLVASARSLGAGRLAVFREVILPG 184 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P VTG G AW + +E+ S G G+G Y S ++ ++V+G+L Sbjct: 185 ALPSVVTGLAIGMGTAWFCLVTAEMIS-GQF-----GIGYYTWMSYTIQNYADIVVGML 237 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 31/230 (13%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA-------- 91 Q PR++ + SL Q S L+ LSA + + F A +A Sbjct: 45 QNVPPPREVAE------SAWSLVQ--SPLVLQHLSASLRRVFIGFGLAAIAGVALGLAIG 96 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 ++R L+P L++++ IP + ++ ++ F + +E + +F F ++ + Sbjct: 97 RARWAEDTLLPPLEVLRPIPAVAWIPLAILMFPS--------SEASMVFITFIGALFPVL 148 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L +RS F + +P ++P +V + + M WF +V +E Sbjct: 149 LNTVHGVEAVDARLVASARSLGAGRLAVFREVILPGALPSVVTGLAIGMGTAWFCLVTAE 208 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 MI G GIG Y ++ Q+ I+ ML +GV+ + L R Sbjct: 209 MI-SGQF-----GIGYYTWMSYTIQNYADIVVGML-FIGVLGMGSSALVR 251 >gi|300698177|ref|YP_003748838.1| ABC transporter [Ralstonia solanacearum CFBP2957] gi|299074901|emb|CBJ54470.1| Binding-protein-dependent transport systems (glycine betaine and nitrate/sulfonate/bicarbonate) inner membrane component, ABC transporter, permease protein [Ralstonia solanacearum CFBP2957] Length = 298 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N AG + N + V ++ ++G + I++P FP +TG AW Sbjct: 173 WAVSLNTHAGFQSVSNTLRMVGRNYGLSGLAYLTKILIPAAFPSILTGLKIGWAFAWRTL 232 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 I SE+ + GLG YI E+ PEV G+L + L + ++ L Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 93 SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 RLG + L M +P + L +V+F L G ++ F I S VW ++ Sbjct: 125 GNRLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGSGSLV-------FVIVHSVVWAVS 176 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ L V R++ LSG + +P + P ++ + + + W ++ASE Sbjct: 177 LNTHAGFQSVSNTLRMVGRNYGLSGLAYLTKILIPAAFPSILTGLKIGWAFAWRTLIASE 236 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263 ++ G+G YI + ++LL I +LT++ + L + L+FR + Sbjct: 237 LVF--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 >gi|333023680|ref|ZP_08451744.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071] gi|332743532|gb|EGJ73973.1| putative ABC transporter permease protein [Streptomyces sp. Tu6071] Length = 241 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 14/223 (6%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G + + +T +L IW ++ R + ++A +I P+G+ + + + I P Sbjct: 24 GELSDAWTQGKLLGYIW---TSVSRGLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSG 80 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ + P V + LN ++ +++++ G I +++G P + Sbjct: 81 LQSLPSVAWVP---PAVLWLGLNSSMMYAVILL-GAVPSIANGLVSGVDQVPPLYLRAGR 136 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543 + TG R +I+LP P Y+ G +W + + +E +AS + + GLG + Sbjct: 137 TLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI---GLGQLL 193 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 S V L + ++ +A++ ++ PL R LR Sbjct: 194 ENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLE---RRVLR 233 >gi|311108941|ref|YP_003981794.1| binding-protein-dependent transporter inner membrane component family protein 65 [Achromobacter xylosoxidans A8] gi|310763630|gb|ADP19079.1| binding-protein-dependent transport system inner membrane component family protein 65 [Achromobacter xylosoxidans A8] Length = 256 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 20/203 (9%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D L ++ T++ L ++S+ + SR L ++P+L + Q+ P + Sbjct: 46 DSAFLGHHSWVTSVETLGGFLLSIAVGIPLGIVLVWSRPLERAIMPLLVVSQAFPKVAVA 105 Query: 117 TFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 +++F + L+P K++ A A F I S V M ++ DL +++RS R Sbjct: 106 PLIIIWFGLGLFP-KILIAFSVAFFPIVVSTVAGMR--------SVDADLNDLARSMRAG 156 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + F + +P+++P + + ++++ A+ VVG+ V G+G + A Sbjct: 157 ALRTFLRIRLPYALPQIFSGLKVAIA------FATVGAVVGEWVGAESGLGYVLLSANAN 210 Query: 236 QD---LLAILYAMLTMLGVIFLY 255 D L A+L A++ ++G++F Y Sbjct: 211 LDTTLLFAVLVALM-LIGLVFYY 232 >gi|295695572|ref|YP_003588810.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] gi|295411174|gb|ADG05666.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] Length = 304 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 36/184 (19%), Positives = 80/184 (43%), Gaps = 24/184 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T++RV++ +A+++ +P+GI +G I + ++P PA+ F PL++ Sbjct: 115 TVWRVLLGFALAAVVAVPLGILMGVYRPIEAILEPLVSFARYMPASAFIPLLI------- 167 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW+ + ++ G+ + ++ V + E A + R+++ Sbjct: 168 ----LWVGIGDAEKVSVIFLGSLFSLILMVAVHVHHVRRELTEAAYTLGAKDGFVVRHVV 223 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P FP G AW IV+E+ + +G+G I +S +++ G Sbjct: 224 IPAAFPEIYDTLRLVLGWAWTYVIVAELVA------AKSGIGYVILQSQRMLQTADIIFG 277 Query: 559 VLIM 562 ++++ Sbjct: 278 IVVI 281 >gi|282898027|ref|ZP_06306022.1| nrtB (Nitrate transport permease) [Raphidiopsis brookii D9] gi|281197171|gb|EFA72072.1| nrtB (Nitrate transport permease) [Raphidiopsis brookii D9] Length = 241 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 8/98 (8%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L +R L + PI ++++IP L +L ++ F P +AIF IF + +W Sbjct: 111 LIGANRFLYNAVDPIFQVLRTIPPLAWLPISLAAFQQANP--------SAIFVIFITSIW 162 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + + + NIP+D V+R RL + F + P Sbjct: 163 PILINTTVGVQNIPQDYVNVARVLRLRQGKYFLKISFP 200 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV + +A+I+ I +GI IG + + + P Q+L P + P +S Sbjct: 85 WQILTSLGRVGLGFSLATIVGIFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLP--ISL 142 Query: 441 VSYYHLNPNLWLSLLMIFGTQ-WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ NP+ ++ +IF T W IL N G P D+ VA + +++ I Sbjct: 143 AAFQQANPS---AIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQGKYFLKISF 199 Query: 500 P 500 P Sbjct: 200 P 200 >gi|197295267|ref|YP_002153808.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944746|emb|CAR57350.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 295 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L + +L F +LA S R+G L+ +L M +P + L +++F L G Sbjct: 102 LLRGYALGVLLAFALTSLAV-STRIGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGS 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + + +W + S+Y +P L+ R++ L+G ++ + VP ++P Sbjct: 160 LL-------FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALP 212 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235 >gi|159043985|ref|YP_001532779.1| binding-protein-dependent transport systems inner membrane component [Dinoroseobacter shibae DFL 12] gi|157911745|gb|ABV93178.1| binding-protein-dependent transport systems inner membrane component [Dinoroseobacter shibae DFL 12] Length = 513 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+G++ RP + IQP + PA VF +V ++++ + + + MIF Sbjct: 345 VIGIPLGMFAARRPRFYAFIQPIMDFMQTMPAFVF---MVPVIAFFGVGKPAAVIVTMIF 401 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + V+ G P +E A SF W + LP P G Sbjct: 402 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTKVDLPLAGPSIRAG 451 >gi|254250602|ref|ZP_04943921.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Burkholderia cenocepacia PC184] gi|124879736|gb|EAY67092.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Burkholderia cenocepacia PC184] Length = 295 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L + +L F +LA S R+G L+ +L M +P + L +++F L G Sbjct: 102 LLRGYALGVLLAFALTSLAV-STRIGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGS 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + + +W + S+Y +P L+ R++ L+G ++ + VP ++P Sbjct: 160 LL-------FVLVHAVLWPLALSIYTGFVGVPATLKMAGRNYGLTGLRQIALILVPAALP 212 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 213 SILSGLRVGWAFAWRTLIAAELV 235 >gi|254469776|ref|ZP_05083181.1| ABC transporter permease protein [Pseudovibrio sp. JE062] gi|211961611|gb|EEA96806.1| ABC transporter permease protein [Pseudovibrio sp. JE062] Length = 668 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 15/175 (8%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 V LA KS +L PILD+MQ++PI +L +++ P ++A+FA Sbjct: 176 LVLGILAYKSAGFERLLRPILDLMQTVPIFAYLV-PILFLFGFGP-------VSALFATI 227 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + M + +L ++P L E + + Q W + +P ++P L M G Sbjct: 228 IYAMPPMVRVVLVALQSVPTQLHEAGQMAGCTSRQMMWKVLLPSALPTL-------MVGV 280 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 ++ S +V+ ++I G+G + A++ D+ + A L ++ + D+L Sbjct: 281 NQVIMLSLNMVIIASIIGAGGLGYDVLAALRRLDIGGGIEAGLAIVVIAIALDRL 335 >gi|189467051|ref|ZP_03015836.1| hypothetical protein BACINT_03434 [Bacteroides intestinalis DSM 17393] gi|189435315|gb|EDV04300.1| hypothetical protein BACINT_03434 [Bacteroides intestinalis DSM 17393] Length = 394 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 14/198 (7%) Query: 75 AMVISLLFTF---VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127 A++I+L F +Y + A SR + +L PI++++ IP + GF V+ + ++ Sbjct: 185 AILIALPFGLSVAIYMSEVANSR-IRNLLKPIIELLSGIPSVVYGFFGLIVIVPFIQKVF 243 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 V + LA + + + ++ N PR + E S + S WQ + + +P+ Sbjct: 244 NLPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPY 303 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAI 241 S+ G+ +++ + +A M+ VI PL I + IA + E Sbjct: 304 SVSGITSGVVLGIGRAIGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGA 363 Query: 242 LYAMLTMLGVIFLYDQLL 259 Y L +LGV+ + LL Sbjct: 364 HYEALFLLGVVLFFISLL 381 >gi|251799062|ref|YP_003013793.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247546688|gb|ACT03707.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length = 259 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +RV + S++ IP+G+ IG I +PF + P F L + ++ Sbjct: 59 ISFYRVFAGWALGSLLAIPIGLTIGKVTAIRVFAEPFLNFVRFIPPIAFITL---FLVWF 115 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++L+M + T + ++ N + G A D A S + W+ ++++P P Sbjct: 116 GIGEQSKIALIM-YATLFIVIINTLTGVLAIEEDRIRSARSMGASEWQILLHVVIPATTP 174 Query: 505 YYVTGAITACGGAWNASIVSEV 526 Y TG A G ++ A I +E+ Sbjct: 175 YIFTGIRLAMGTSYMAIIGAEM 196 >gi|156933297|ref|YP_001437213.1| hypothetical protein ESA_01109 [Cronobacter sakazakii ATCC BAA-894] gi|156531551|gb|ABU76377.1| hypothetical protein ESA_01109 [Cronobacter sakazakii ATCC BAA-894] Length = 377 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 14/98 (14%) Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 G+++ P+ + Q+ P LG L V L P A+ A+ + + + Sbjct: 221 GLLMAPLAGLAQAFPALGALG---VSGTGLAP---------ALIALTLYALLPLVRGVVA 268 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 L +P + E +R +S WQ+ W++ VP ++P VW Sbjct: 269 GLGQVPDAVRESARGVGMSAWQRLWHVDVPLALP--VW 304 >gi|118472106|ref|YP_888794.1| binding-protein-dependent transporters inner membrane component [Mycobacterium smegmatis str. MC2 155] gi|118173393|gb|ABK74289.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium smegmatis str. MC2 155] Length = 265 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 32/148 (21%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++++R+ + + +A++I +P+G+ IG SS+I A P F ++ Sbjct: 77 VSLWRLSIGLAVATVIGMPLGLLIG-----SSRIAERA----GGPIIAFLRMI------- 120 Query: 445 HLNPNLWLSL-LMIFG-------------TQWYILFNVIAGASAFPNDFKEVASSFHITG 490 +P W + L +FG W +L N AG A VA SFH T Sbjct: 121 --SPLSWTPIALAVFGIGNQPVVFLVAVAAVWPVLLNTAAGVRAVDPGLLNVARSFHATR 178 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAW 518 W +ILP I + TG A G AW Sbjct: 179 WEMMLAVILPAIRTHVQTGIRLALGVAW 206 >gi|84385528|ref|ZP_00988559.1| putative permease [Vibrio splendidus 12B01] gi|218709515|ref|YP_002417136.1| ABC transporter transmembrane protein [Vibrio splendidus LGP32] gi|84379508|gb|EAP96360.1| putative permease [Vibrio splendidus 12B01] gi|218322534|emb|CAV18693.1| ABC transporter: transmembrane protein (IM) [Vibrio splendidus LGP32] Length = 299 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 25/151 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R ++ P+LDIMQ++P +L V M L GK+ G I+AI ++ N Sbjct: 129 ARSNRAQSIVTPMLDIMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ W + +P +MP G+ +MM++S Sbjct: 186 LGIRL------VDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS---- 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 M+V+ ++I + G+G + +I Q Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQ 259 >gi|315505552|ref|YP_004084439.1| binding-protein-dependent transport systems inner membrane component [Micromonospora sp. L5] gi|315412171|gb|ADU10288.1| binding-protein-dependent transport systems inner membrane component [Micromonospora sp. L5] Length = 278 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 6/116 (5%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ G + I FN AG E A + + R+++LPG P G A Sbjct: 149 LVALGAFFPIYFNTYAGIRDIDERLVEAARTCGLGAAARLRHVVLPGALPALFLGLRLAI 208 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW + +V E + TG+G + E+ E VVLG+LI LA + Sbjct: 209 GAAWLSLVVGEQVNA------QTGVGFLMMEAREFSQTDVVVLGLLIYALLGLASD 258 >gi|308068351|ref|YP_003869956.1| ABC transporter permease yqgH [Paenibacillus polymyxa E681] gi|305857630|gb|ADM69418.1| Probable ABC transporter permease protein yqgH [Paenibacillus polymyxa E681] Length = 301 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 7/158 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YF 123 T L L A +SL + KS + +L P ++++ IP + GF+ TV+ Sbjct: 89 TILAALIASPLSLCAALFMTEIVPKSGK--RILQPAIELLSGIPSVVYGFVGLTVIVPLL 146 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 N++ G+ IG LA + + +T M +L ++P L E S + + WQ + Sbjct: 147 RNVFGGQGIGI-LAGCLVLSVMILPTITSIMADALSSLPGGLRESSYALGATRWQTIARV 205 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +P +P L+ +++ M+ + +A +M++ IP Sbjct: 206 IIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHIP 243 >gi|170741664|ref|YP_001770319.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168195938|gb|ACA17885.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 297 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 14/189 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R+L + + + + L R L +L+PI+ ++ I + +L + F Sbjct: 103 TTMRVLVGLALGFVGGVLVGALLHSVRLLRNLLMPIVLMLAPISPVAWLPVAIFVFG--- 159 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG + AIF +F + + + S + ++P+ V+R + Q FW + +P Sbjct: 160 ----IG-DKPAIFLVFITLFFAIVLSTGAQIESVPKTYIHVARIMGATHRQTFWRVILPA 214 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P L + +++ G W V+ +E + VG G+G A+A + + + M Sbjct: 215 ILPSLFVTLRLNLFGAWMVVLIAETVGVGT------GLGQITAMARSTFNAKLVFFTMAV 268 Query: 248 MLGVIFLYD 256 + + FL D Sbjct: 269 IGLLGFLSD 277 >gi|319443151|ref|ZP_07992307.1| binding-protein-dependent transport systems inner membrane component [Corynebacterium variabile DSM 44702] Length = 274 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 5/164 (3%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++RV+V ++A ++ +P+G++ G P + I+P + P F PL + V Sbjct: 81 ISVWRVMVGYVLAVVLAVPIGVFAGSSPRAEAAIEPLTDFIRYMPVVAFVPLTIIWVGTE 140 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L++ GT + ++ V P ++ + ++ + +I++P P Sbjct: 141 DSQKF----LIIWLGTFFQMVLMVADAVRQVPRSYQNLGATLGMGRLSILSHIVVPAALP 196 Query: 505 YYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547 G AW+ +V+E VA+ + R T ++A T Sbjct: 197 RIWDTLRLCLGWAWSWLVVAELVAASSGMGYRITQAQRFLATDT 240 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 40/218 (18%), Positives = 94/218 (43%), Gaps = 20/218 (9%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D+V ++ T L + R++ V++++ A S R + P+ Sbjct: 59 PADVVHVISDTATNGQLWSDMRISVWRVMVGYVLAVVLAVPIGVFAGSSPRAEAAIEPLT 118 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF-AIFTSQVWNMTFSMYQSLCNIPR 163 D ++ +P++ F+ T+++ +G E + F I+ + M + ++ +PR Sbjct: 119 DFIRYMPVVAFVPLTIIW---------VGTEDSQKFLIIWLGTFFQMVLMVADAVRQVPR 169 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 + + + + ++ VP ++P + + + + W ++V +E++ Sbjct: 170 SYQNLGATLGMGRLSILSHIVVPAALPRIWDTLRLCLGWAWSWLVVAELVAASS------ 223 Query: 224 GIGSYIALAIK--EQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A + D + +L +LG+IF DQ++ Sbjct: 224 GMGYRITQAQRFLATDTIIAYVIVLGLLGLIF--DQIM 259 >gi|157147150|ref|YP_001454469.1| hypothetical protein CKO_02927 [Citrobacter koseri ATCC BAA-895] gi|157084355|gb|ABV14033.1| hypothetical protein CKO_02927 [Citrobacter koseri ATCC BAA-895] Length = 207 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 35/194 (18%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Y D+L +W + V +++A I + +GI RP + + + ++ + P Sbjct: 8 YDDILLALWQHLVL---VGAAMLMAFAISLFLGITTARRPRLYALVMAVTGMIFSIPGLA 64 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLM---IFGTQWYILF----NVIAGASAFPNDFKEVASS 485 F L++ WL + M I G Y L N+ G A P D +E A Sbjct: 65 LFALLIP-----------WLGIGMLPAIVGLTAYALMILTRNIATGFHAIPLDVREAARG 113 Query: 486 FHITGWRWWRYIILPGIFPYYVTG---AITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 WR R + LP P+ +TG A T G ++ VA++ + GLGA Sbjct: 114 MGYGAWRNLREVELPLALPFIITGLRIATTTLIG------IATVAAY----INAGGLGAI 163 Query: 543 IAESTEKGSFPEVV 556 I ++ +PE + Sbjct: 164 ILAGLDQ-RYPEKI 176 >gi|302335464|ref|YP_003800671.1| binding-protein-dependent transport systems inner membrane component [Olsenella uli DSM 7084] gi|301319304|gb|ADK67791.1| binding-protein-dependent transport systems inner membrane component [Olsenella uli DSM 7084] Length = 253 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 11/176 (6%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +RR F + LA LV + ++L + +P +V + D L +++ T L Sbjct: 4 ARRTFIPLTATLAL-LVAWQLAVMLGLVPNFLLPSPTQVVVALIEDASLLVSHSAATLLE 62 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 ++I FV A L + +G+ L P++ + Q+IP + V++F L P Sbjct: 63 AFLGLLIGCAVGFVVAVLMDRFEAVGLALDPLVTLSQTIPTVAIAPLLVLWFGYGLAPKV 122 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 V+ + S + +T S+ + D+ ++ R+ WQ FW + +P Sbjct: 123 VL---------VIISTFFPITVSLVSGFRSADADMIDLMRTMNAGDWQIFWQVKIP 169 >gi|224824410|ref|ZP_03697518.1| binding-protein-dependent transport systems inner membrane component [Lutiella nitroferrum 2002] gi|224603829|gb|EEG10004.1| binding-protein-dependent transport systems inner membrane component [Lutiella nitroferrum 2002] Length = 290 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 24/181 (13%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 PQ S L LSA +ISL+ A+S+R+ ++ P+LD MQ++P +L + Sbjct: 97 PQTVSTLALT-LSATLISLMIGIPTGIWCARSKRVNTLVRPVLDFMQTMPAFVYLIPAAM 155 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F G+V G +FA+ V + + Q + ++ E +F + Q + Sbjct: 156 FF---GLGRVPGILATVVFAV-PPAVRLTSLGIRQ----VNKEQVEAGHAFGCTSTQLLF 207 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P ++P G+ +MM++S V+ + M+ G G+G+ + +I+ D Sbjct: 208 KVQLPIALPAIMAGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLSSIQRLD 256 Query: 238 L 238 + Sbjct: 257 V 257 >gi|114707706|ref|ZP_01440601.1| putative ABC transporter protein [Fulvimarina pelagi HTCC2506] gi|114536950|gb|EAU40079.1| putative ABC transporter protein [Fulvimarina pelagi HTCC2506] Length = 268 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 6/137 (4%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E+AAI AI +++ N+ +M + + RDL E++ +R ++ ++ +P P Sbjct: 136 EVAAIGAIAVNKIPNVVVTMREGARALDRDLTEMAEVYRFGAMKRLRHVVLPQLQPYFAA 195 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 ++ W + E++ D G+G I L + D+ IL L + V+ L Sbjct: 196 ASRSGLALIWKIALVVELLGRSD------GVGFQINLYFQLFDVAGILAYTLAFVAVMLL 249 Query: 255 YDQLLFRPMIVWSNKFR 271 + L+ +P+ + ++R Sbjct: 250 IELLIVQPLEAHATRWR 266 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 14/205 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T+ RV + A +I +GI +G + P+ L PA LVV ++Y Sbjct: 75 AMTLMRVFFAFVAAMVIGSAIGIALGISREANRFFDPWLILFLNIPA-----LVVIVLAY 129 Query: 444 --YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 + LN + + + ++ + GA A D E+A + + R+++LP Sbjct: 130 IWFGLNEVAAIGAIAVNKIP-NVVVTMREGARALDRDLTEMAEVYRFGAMKRLRHVVLPQ 188 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 + PY+ + + W ++V E+ R+ G+G I + ++ L Sbjct: 189 LQPYFAAASRSGLALIWKIALVVELLG------RSDGVGFQINLYFQLFDVAGILAYTLA 242 Query: 562 MCCFVLALNRFLWHPLYLYGTRCLR 586 +L + + PL + TR R Sbjct: 243 FVAVMLLIELLIVQPLEAHATRWRR 267 >gi|107022636|ref|YP_620963.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116689585|ref|YP_835208.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|105892825|gb|ABF75990.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116647674|gb|ABK08315.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 270 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA + R WHP Y G + Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQSGAKA 270 >gi|310641205|ref|YP_003945963.1| phosphate abc transporter, permease pstc [Paenibacillus polymyxa SC2] gi|309246155|gb|ADO55722.1| Phosphate ABC transporter, permease PstC [Paenibacillus polymyxa SC2] Length = 310 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 7/158 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YF 123 T L L A +SL + KS + +L P ++++ IP + GF+ TV+ Sbjct: 98 TILAALIASPLSLCAALFMTEIVPKSGK--RILQPAIELLSGIPSVVYGFVGLTVIVPLL 155 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 N++ G+ IG LA + + +T M +L ++P L E S + + WQ + Sbjct: 156 RNVFGGQGIGI-LAGCLVLSVMILPTITSIMADALSSLPGGLRESSYALGATRWQTIARV 214 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +P +P L+ +++ M+ + +A +M++ IP Sbjct: 215 IIPTLLPALLTGIILGMARAFGEALAVQMVIGNAPHIP 252 >gi|158314940|ref|YP_001507448.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EAN1pec] gi|158110345|gb|ABW12542.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EAN1pec] Length = 281 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 4/127 (3%) Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 G +TM V+V + S++ I + + I + PF P P++++ + Sbjct: 81 GWVTMKEVLVGFSLGSLLAISLAVIITRWRFVERTFYPFIVAFQTIPKIALAPIIITWMG 140 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + + L LL +F +L N I G + D ++ + T W+ +RY+ LP Sbjct: 141 FGEASKMLMAGLLTLFP----VLVNTITGLKSVEQDQLDLMRALQATEWQIFRYVRLPRA 196 Query: 503 FPYYVTG 509 PY G Sbjct: 197 LPYIFAG 203 >gi|167566077|ref|ZP_02358993.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Burkholderia oklahomensis EO147] gi|167573155|ref|ZP_02366029.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Burkholderia oklahomensis C6786] Length = 300 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ ++SL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|238027525|ref|YP_002911756.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia glumae BGR1] gi|237876719|gb|ACR29052.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia glumae BGR1] Length = 278 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + I N G + + E+ Sbjct: 118 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVSLGVFFPIYINTYHGIRSVDANLIEM 173 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G +R +ILPG P + G A G W IV+E S +G+G Sbjct: 174 ARSYGVKGLALYRDVILPGALPSILVGVRFALGLTWVMLIVAETIS------AQSGIGYM 227 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G + Sbjct: 228 TMNAREFLQTDVVVVGILLYAILGKLADVLAKWLERTTLRWHPAYQPGAKA 278 >gi|269124729|ref|YP_003298099.1| binding-protein-dependent transport systems inner membrane component [Thermomonospora curvata DSM 43183] gi|268309687|gb|ACY96061.1| binding-protein-dependent transport systems inner membrane component [Thermomonospora curvata DSM 43183] Length = 273 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R + + +I I + + G + P Q+L A P F L+ + ++ Sbjct: 79 VSLRRAALGFALGAIAGIGLALIAGLSRLGEHAVDPPMQMLRALP---LFGLIPLFILWF 135 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++L + FG + + N AG E+ ++ R+I+LPG P Sbjct: 136 GIGETPKIAL-VAFGVAFPLYLNTYAGIRGVDAKLAELGKVLRLSRAALIRHIVLPGALP 194 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G AW A IV+E + GLG I ++ E VV+G+L Sbjct: 195 QTLVGLRQSLGVAWLALIVAEQINANQ------GLGFMINDAREFLRTDIVVVGLLTYAA 248 Query: 565 FVLALNRF 572 L + F Sbjct: 249 LGLLTDAF 256 >gi|271963349|ref|YP_003337545.1| ABC transporter transmembrane protein [Streptosporangium roseum DSM 43021] gi|270506524|gb|ACZ84802.1| ABC transporter membrane protein [Streptosporangium roseum DSM 43021] Length = 256 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 10/153 (6%) Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 ++IA + +P G+ +G P + S ++P + L P+ PL + + + Sbjct: 68 LLIAVAVAVPAGLLLGTVPTVESALRPLIEFLRPIPSVALIPLAL----FLFTDGTQAKV 123 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 L++F W +L N + G K+ SF + LP P+ VTG A Sbjct: 124 ALIVFTAAWPLLINTMYGLREVDPVAKDTLRSFGFGPLAVVVRVSLPSAAPFVVTGVRIA 183 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 A ++ E+ + G G+G ++ ++ Sbjct: 184 ASVALIVAVSVELVAGG------AGIGTFLGDA 210 >gi|217978592|ref|YP_002362739.1| binding-protein-dependent transport systems inner membrane component [Methylocella silvestris BL2] gi|217503968|gb|ACK51377.1| binding-protein-dependent transport systems inner membrane component [Methylocella silvestris BL2] Length = 270 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 11/109 (10%) Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 W ++ + ++ I RDL EV+R+F G + + + + +P + PG++ + + W Sbjct: 153 WINFYAAFGAVQAIDRDLMEVARAFGHGGFFGRLFKIALPAATPGILAGVRTGLGQAWMS 212 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 VVA+E+ V PGIG+ + ++ LLA ++ ML + LY Sbjct: 213 VVAAELFGV-------PGIGARM---MQAASLLATDLVVVYMLTMALLY 251 >gi|121608093|ref|YP_995900.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121552733|gb|ABM56882.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 255 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 19/197 (9%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+ + A+++ IP+GI++G + + P LL P+ + PL + ++ + Sbjct: 69 RVMTGFLAATVVAIPLGIFLGMSRYARAAFDPILSLLRPLPSMSWIPL---SLLWFGITE 125 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 S++ + G L VI A + + W+ R ++LPG P ++ Sbjct: 126 TQKYSIVFM-GCFAPALVYVIEATRNVDPVLIRAAQNLGASRWQVMREVVLPGSLPQILS 184 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL- 567 G G AW I +E+ + GLG I E VVLG++++ VL Sbjct: 185 GLKIILGLAWTCVISAELVA------AREGLGFLIMNGKEFFQTEVVVLGMVMISLTVLL 238 Query: 568 ------ALNRFL--WHP 576 A+ R L W P Sbjct: 239 TDVVFRAIGRKLLRWQP 255 >gi|114706924|ref|ZP_01439823.1| putative permease protein [Fulvimarina pelagi HTCC2506] gi|114537474|gb|EAU40599.1| putative permease protein [Fulvimarina pelagi HTCC2506] Length = 281 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 31/178 (17%) Query: 69 TLRMLSAMVI----SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF- 123 T++ LS +V+ S+L L ++S +L ++ PILD+MQ++P +L V+ Sbjct: 86 TMQTLSIIVVCTLLSILIGMPIGILMSRSDKLQAIVNPILDVMQTMPSFVYLIPIVMLLG 145 Query: 124 MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + L PG ++ I+A+ ++ N+ + + +++ E + +F S WQK Sbjct: 146 IGLIPGLIV----VVIYAMPPIIRLTNLGIRL------VDKEVLEAANAFGSSSWQKLVQ 195 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P S+P G+ +MM+++ M+VV ++I + G+G + AI Q Sbjct: 196 VQLPLSLPTIMAGINQTIMMALA----------MVVVA-SLIGVRGLGQPVLQAITNQ 242 >gi|91224752|ref|ZP_01260012.1| putative permease of ABC transporter [Vibrio alginolyticus 12G01] gi|254227614|ref|ZP_04921045.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262395662|ref|YP_003287515.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio sp. Ex25] gi|269964379|ref|ZP_06178621.1| putative permease of ABC transporter [Vibrio alginolyticus 40B] gi|91190298|gb|EAS76567.1| putative permease of ABC transporter [Vibrio alginolyticus 12G01] gi|151939656|gb|EDN58483.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262339256|gb|ACY53050.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio sp. Ex25] gi|269830876|gb|EEZ85093.1| putative permease of ABC transporter [Vibrio alginolyticus 40B] Length = 266 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA L +L PILD+MQ++P +L T+V Sbjct: 77 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWLYTLLRPILDLMQTVPTFVYLIPTLVL 136 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P +L E ++F S + + Sbjct: 137 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGIIKVPEELLEAGKAFGASRMKLLF 187 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 188 KVELPAALPSI-------MAGVTQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 240 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 241 FEAGLAIVLVAIILDRLCKAP 261 >gi|256396485|ref|YP_003118049.1| sulfate ABC transporter permease [Catenulispora acidiphila DSM 44928] gi|256362711|gb|ACU76208.1| binding-protein-dependent transport systems inner membrane component [Catenulispora acidiphila DSM 44928] Length = 294 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 16/180 (8%) Query: 403 PVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 P+GI +G F+P + + I P L + P+ + P + ++ +P + S++++ G Sbjct: 115 PLGILVGRFKP-VRAGIGPILSGLQSLPSVAWVP---PALMFFGPSPAMLYSVVLL-GAV 169 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 I V++G P + V + G R+++LP P Y+ G AW + Sbjct: 170 PSIAVGVMSGLDQVPPLYLRVGHNIGARGLASVRHVLLPAALPGYLAGLRQGWAFAWRSL 229 Query: 522 IVSEV----ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 + SE+ AS GH LG + S + ++++ +A+N+ L+ PL Sbjct: 230 LASEIIVQSASLGH------SLGFLLKNSQDGNDMSGAFAAIVLILAVGVAVNQLLFVPL 283 >gi|254473093|ref|ZP_05086491.1| putative ABC transporter permease protein [Pseudovibrio sp. JE062] gi|211957814|gb|EEA93016.1| putative ABC transporter permease protein [Pseudovibrio sp. JE062] Length = 236 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 15/168 (8%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 A L + SRR+ + L+P + QS+P+ V++F KV+ A + F++ Sbjct: 64 AILLSMSRRVRLFLLPPIAATQSLPVFAIAPLLVLWFGFGLASKVVMAVIVIFFSV---- 119 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 T + + L + L ++ + L+ WQ Y+ +P +MP L M ++ Sbjct: 120 ----TSTFFDGLRRTDQSLLDLGKLHGLNRWQMLRYIRIPAAMPSLASGMRIAA------ 169 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 V A VVG+ V G+ ++I L + A ++A L +L V+ L Sbjct: 170 VFAPIGAVVGEWVGAKGGL-AFIMLQSNARMQTATMFAALILLAVMVL 216 >gi|291458320|ref|ZP_06597710.1| putative ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418853|gb|EFE92572.1| putative ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 256 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/207 (19%), Positives = 89/207 (42%), Gaps = 23/207 (11%) Query: 378 YVIWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 Y++ L I ++V I+ S+ + + +G+ +G + + P ++ P+ + P Sbjct: 58 YIMLLNLIASLSILVPAIVISLSLALLIGVIMGMNRGLRDALHPVLYTISVVPSILLSPF 117 Query: 437 VVSCVSYYHLNPNLWLS--LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 + L PN + L+++ + W +F I G + + A + + G+R Sbjct: 118 AL------LLAPNFRTASLFLIVYESVWATVFGTITGIMTIDRRYLDKAETLELHGFRKL 171 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++LP P ++G + + G + + +E+ + G+G Y+ ++ G + + Sbjct: 172 FRVMLPAASPSIISGFVNSLSGTFVMLVYAEMYGAEY------GMGYYVRQNAMLGLYDK 225 Query: 555 --------VVLGVLIMCCFVLALNRFL 573 +V+ V+IM F NR L Sbjct: 226 TWAGFIFMIVILVIIMQIFEKIRNRLL 252 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 8/141 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ++ A+VISL + + +R L L P+L + +P + F ++ N Sbjct: 71 LVPAIVISLSLALLIGVIMGMNRGLRDALHPVLYTISVVPSILLSPFALLLAPNF----- 125 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 A++F I VW F + I R + + + L G++K + + +P + P Sbjct: 126 ---RTASLFLIVYESVWATVFGTITGIMTIDRRYLDKAETLELHGFRKLFRVMLPAASPS 182 Query: 192 LVWNMMMSMSGGWFFVVASEM 212 ++ + S+SG + +V +EM Sbjct: 183 IISGFVNSLSGTFVMLVYAEM 203 >gi|163790850|ref|ZP_02185275.1| glycine betaine ABC transporter permease [Carnobacterium sp. AT7] gi|159873918|gb|EDP67997.1| glycine betaine ABC transporter permease [Carnobacterium sp. AT7] Length = 283 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 27/164 (16%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L A ++S++ + L AK++ ++ P+LD MQ++P +L V +F + + PG Sbjct: 105 VLVASLLSVIIGVPFGILMAKNKVANTIIAPVLDFMQTMPAFVYLIPAVAFFGIGMVPG- 163 Query: 131 VIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS- 188 + A L IFAI T + N+ + + +L E + SF +G QK + + +P + Sbjct: 164 -VFASL--IFAIPPTVRFTNL------GIRQVSDELVEAAESFGSTGAQKLFKVELPLAK 214 Query: 189 ---MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 M G+ +M+++S M+V+ ++I PG+G + Sbjct: 215 STIMAGINQTVMLALS----------MVVIA-SMIGAPGLGREV 247 >gi|153008760|ref|YP_001369975.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum anthropi ATCC 49188] gi|151560648|gb|ABS14146.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum anthropi ATCC 49188] Length = 257 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 10/145 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV--SCVS 442 +T++RV+ ++AS++ IP+GI +G I + ++PF PA+ F PL++ S + Sbjct: 66 MTVWRVLGGFVLASVVAIPLGIAMGAYKPIEALLEPFVSFARYLPASAFVPLLILWSGIG 125 Query: 443 YYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 LL+IF G + I+ + S D E A + + R +++P Sbjct: 126 ETQ-------KLLVIFIGAVFQIILMIAVTVSNTRRDLVEAAYTLGASNSGIIRRVLMPA 178 Query: 502 IFPYYVTGAITACGGAWNASIVSEV 526 P G AW IV+E+ Sbjct: 179 SAPDIAETLRLVLGWAWTYVIVAEL 203 >gi|328545184|ref|YP_004305293.1| glycine betaine/l-proline transporter permease prow [polymorphum gilvum SL003B-26A1] gi|326414926|gb|ADZ71989.1| Glycine betaine/l-proline transport system permease protein prow [Polymorphum gilvum SL003B-26A1] Length = 282 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL VL PILD+MQ+IP +L ++ F + + PG + A I +++ Sbjct: 118 AAHRPRLYAVLRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPAPIRLTRL- 176 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 + + P L E +F + Q W + +P+++P GL +M+S+S Sbjct: 177 --------GVASTPVQLLEAGHAFGATRSQLLWKVELPYALPQIMAGLTQTIMLSLS 225 >gi|312865610|ref|ZP_07725835.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus downei F0415] gi|311098878|gb|EFQ57097.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus downei F0415] Length = 575 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AK+ V+ PILD MQ++P +L V +F G V G + IFA+ T ++ N Sbjct: 122 AKNETAKKVINPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRMTN 178 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + IP +L E S +F + QK + + +P + M G+ +M+S+S Sbjct: 179 L------GIREIPTELVEASDAFGSTSQQKLFGVELPLAKNTIMAGINQTIMLSLS---- 228 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV ++I PG+G+ + A++ ++ Sbjct: 229 -------MVVTASMIGAPGLGNGVLSALQHAEI 254 >gi|306831429|ref|ZP_07464587.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978336|ref|YP_004288052.1| phosphate transport system permease pstC [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304426214|gb|EFM29328.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178264|emb|CBZ48308.1| phosphate transport system permease protein pstC [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 305 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 118 ILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 176 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR +E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 177 VDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVV 236 Query: 215 VGDTVIP 221 V+P Sbjct: 237 GNSAVVP 243 >gi|254455769|ref|ZP_05069198.1| glycine betaine/L-proline transport system permease protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082771|gb|EDZ60197.1| glycine betaine/L-proline transport system permease protein [Candidatus Pelagibacter sp. HTCC7211] Length = 500 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 12/192 (6%) Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 W+ +T ++ I SI I IP+GI+ R S I+P + PA VF ++ Sbjct: 312 WVKAMTTLALLGTAAILSIAIGIPLGIFCARRQRFYSMIRPIMDFMQTMPAFVF---MIP 368 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++++ + + MIFG + V+ G P +E A ++ T W R + L Sbjct: 369 VIAFFGTGKVAAVIITMIFGGTPVVRLTVL-GLRGVPETIREAAIAYGATKWYLLRKVDL 427 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P + G + +V+ + + GLG + E+ + + + +L Sbjct: 428 PLATPSILAGVNQTVMLSLAMVVVASL-------IGAKGLGQDVLEALQYANVGQGILAG 480 Query: 560 LIMCCFVLALNR 571 + + L L+R Sbjct: 481 VAILFVALILDR 492 >gi|297570467|ref|YP_003691811.1| binding-protein-dependent transport systems inner membrane component [Desulfurivibrio alkaliphilus AHT2] gi|296926382|gb|ADH87192.1| binding-protein-dependent transport systems inner membrane component [Desulfurivibrio alkaliphilus AHT2] Length = 263 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++++R ++A ++ +P+G+ +G+ + + P QLL +FPL V + Sbjct: 69 AVSLYRFGAAYLLAVVLAVPLGLVLGWFTRLHRALDPLIQLLRPISPVAWFPL---AVLW 125 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + +L ++ + + IL + IA + + +VA +F + W +++P F Sbjct: 126 FKIG-DLPAIFIIFIASFFPILLSTIAAVRNVESTYLKVALNFGSSKWSLLHKVVIPAAF 184 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 PY + G A G W + E+ +GLG +I ++ Sbjct: 185 PYIMVGLHIALGVGWIHLVAGEMLG------AQSGLGYFILDARN 223 >gi|238759169|ref|ZP_04620337.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia aldovae ATCC 35236] gi|238702585|gb|EEP95134.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia aldovae ATCC 35236] Length = 347 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 162 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 216 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 217 TI---LGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 269 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 270 VVIASMIAVG-------GLGQMVLRGIGRLDM 294 >gi|167840043|ref|ZP_02466727.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Burkholderia thailandensis MSMB43] Length = 300 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ ++SL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|71736948|ref|YP_276994.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557501|gb|AAZ36712.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 265 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D++ +LYA+L L L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|288905349|ref|YP_003430571.1| phosphate ABC transporter permease [Streptococcus gallolyticus UCN34] gi|288732075|emb|CBI13640.1| Putative phosphate ABC transporter, permease protein [Streptococcus gallolyticus UCN34] Length = 305 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 118 ILQPAIELLTGIPSVVYGFIGLQVIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 176 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR +E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 177 VDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVV 236 Query: 215 VGDTVIP 221 V+P Sbjct: 237 GNSAVVP 243 >gi|330967525|gb|EGH67785.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 265 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 84/175 (48%), Gaps = 19/175 (10%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D++ + + +LG + L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARGLERVCLRWHPAYQVSK 261 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|330891647|gb|EGH24308.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 265 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 84/175 (48%), Gaps = 19/175 (10%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D++ + + +LG + L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARGLERVCLRWHPAYQVSK 261 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|330891305|gb|EGH23966.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. mori str. 301020] Length = 281 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 97/205 (47%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ ++ +AA+ ++ P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVLFATLVCVVIGVPLGIIAAQKPLFYTIIRPLLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P++MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273 >gi|330874193|gb|EGH08342.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 265 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D++ +LYA+L L L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|288961125|ref|YP_003451464.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] gi|288913433|dbj|BAI74920.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] Length = 270 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 34/71 (47%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N+ AG E S+ +T W +ILPG P ++TG A Sbjct: 141 LVALGTAFPIYLNLFAGIRTVDAKVVEAVSTLGLTRWELIAQVILPGALPAFLTGLRYAL 200 Query: 515 GGAWNASIVSE 525 G AW + +V E Sbjct: 201 GVAWLSLVVGE 211 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 23/209 (11%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + + I + V A +A SRR L +L +++++P L + +++F K Sbjct: 79 RVSAGLAIGVSAGTVCALIAGLSRRGEDALDALLQMLRTLPHLALVPLFILWFGIGETPK 138 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + L F I+ +++ + + + E + L+ W+ + +P ++P Sbjct: 139 IALVALGTAFPIY--------LNLFAGIRTVDAKVVEAVSTLGLTRWELIAQVILPGALP 190 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYA 244 + + ++ W +V VG+ + GIG Y+A+ +E D++ I+YA Sbjct: 191 AFLTGLRYALGVAWLSLV------VGEQINASSGIG-YLAMTAREFLRTDVIIVALIVYA 243 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 +L +L + + +L+ R +VW F E Sbjct: 244 ILGLLADLIV--RLIERSALVWRPAFIKE 270 >gi|170732889|ref|YP_001764836.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169816131|gb|ACA90714.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 270 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA + R WHP Y G + Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQSGAKA 270 >gi|222055581|ref|YP_002537943.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221564870|gb|ACM20842.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 297 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 13/189 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVG-IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 I++ R + + A I+ IP+G I G+ P ++ + P +LL A FPL V Sbjct: 104 AISLQRTLQGLFFALIVAIPLGFILAGWFPRLTRFLGPLLRLLGEINAFSLFPLFVLFFG 163 Query: 443 YYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 L +IF W ILF IAG F ++A S + ++LPG Sbjct: 164 IGELA-----KFSIIFWSCLWPILFTTIAGVRGVDPLFVKLARSMGSGRLLLFFKVLLPG 218 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P TG A+ I +E+ +TGLG I S P + LG ++ Sbjct: 219 ALPSIFTGIRLGATVAFLMLIAAEMIG------ASTGLGWLIHNSNVNFIMPRLYLGAVL 272 Query: 562 MCCFVLALN 570 + +ALN Sbjct: 273 VALLGMALN 281 >gi|328949595|ref|YP_004366930.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328449919|gb|AEB10820.1| ABC-type transporter, integral membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 287 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 29/181 (16%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A +T M+ A IS+L L ++S RL L+P+LD MQ++P +L ++ F Sbjct: 93 AIQTLALMIVATTISVLIGVPTGILMSRSDRLRAFLLPLLDAMQTMPSFVYLIPALMLF- 151 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI---PRDLEEVSRSFRLSGWQKFW 181 L + A+F + ++ + ++ + I +++ E S +F + QK Sbjct: 152 ----------GLGKVPAVFATVIYAVPPAIRLTDLGIRLVDKEVLEASEAFGATARQKLL 201 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P ++P G+ MM++S M+V+ ++I G+G + L I+ D Sbjct: 202 GVQLPLALPNIMAGINQTTMMALS----------MVVIA-SMIGARGLGEQVLLGIQRLD 250 Query: 238 L 238 + Sbjct: 251 V 251 >gi|317485030|ref|ZP_07943912.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316923565|gb|EFV44769.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 252 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 19/204 (9%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+ + +A ++ P+G+ +G + + + P L P V PL ++ L P Sbjct: 59 RVLSAMSLAWLVAFPLGLILGHVRSVDNTLSPMVFLTYPLPKIVLLPLFLTLFGLGDL-P 117 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + LL+ T + IL A A + + S T + R++++P P +T Sbjct: 118 RV---LLIALTTGYQILVVTRASAQGLDKKYLDSFRSLGGTPLQMLRHVLIPAALPDAMT 174 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC----- 563 A G A ++E + GLG I ++ +G E+ G+L M Sbjct: 175 ALKVASGTAVAVLFMAESFA------TRRGLGFLIMDAWGRGDQLEMFTGILAMSLLGVA 228 Query: 564 ----CFVLALNRFLWHPLYLYGTR 583 C VL W ++ G R Sbjct: 229 LYELCNVLETRSCRWRNFHMAGKR 252 >gi|27376029|ref|NP_767558.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27349168|dbj|BAC46183.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 11/121 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +RRL L P + +++IP L ++ +++ K+ + F ++ Sbjct: 166 ARRL---LDPTVQALRAIPSLAWVPLFILWLGIFETSKIALIAVGVFFPVY--------L 214 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + ++ ++ R + EV R+FRLSG + +P +P V ++ + + GW FVVA+E+ Sbjct: 215 GVMGAILSVDRKIVEVGRTFRLSGPAMIRRILLPAVLPAYVVSLRVGLGLGWMFVVAAEL 274 Query: 213 I 213 I Sbjct: 275 I 275 >gi|257483758|ref|ZP_05637799.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289626097|ref|ZP_06459051.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651125|ref|ZP_06482468.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|320326458|gb|EFW82510.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331751|gb|EFW87689.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330868944|gb|EGH03653.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872577|gb|EGH06726.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330987201|gb|EGH85304.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012090|gb|EGH92146.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 265 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 84/175 (48%), Gaps = 19/175 (10%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D++ + + +LG + L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLADLAARGLERVCLRWHPAYQVSK 261 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|138896247|ref|YP_001126700.1| putative aliphatic sulfonates ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|134267760|gb|ABO67955.1| Putative transport system permease protein of aliphatic sulfonates ABC transporter [Geobacillus thermodenitrificans NG80-2] Length = 261 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 15/191 (7%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D+V L+ L Q+ S + R L I FV L R +L + Sbjct: 44 PTDVVAAAWDLLEKGELWQHLSISFGRALIGFAIGGSLGFVLGLLNGVFRPAERLLDTSI 103 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++IP L + +++F KV + +F I+ + + + N+ Sbjct: 104 QMIRNIPHLAMIPLVILWFGIGEEAKVFLVAIGVLFPIYVNTL--------HGIRNVDAG 155 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L E+ R + L WQ FW + +P ++ ++ + ++ W ++V +T+ G Sbjct: 156 LLEMGRVYGLRPWQLFWRIWLPGALSSILVGLRYALGIMWL------TLIVAETIAADRG 209 Query: 225 IGSYIALAIKE 235 IG Y+A+ +E Sbjct: 210 IG-YLAMNARE 219 >gi|22126005|ref|NP_669428.1| inner membrane permease for ABC transporter [Yersinia pestis KIM 10] gi|45441867|ref|NP_993406.1| putative transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51596533|ref|YP_070724.1| ABC taurine/sulfonate transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108807630|ref|YP_651546.1| putative transport system permease [Yersinia pestis Antiqua] gi|108811909|ref|YP_647676.1| transport system permease [Yersinia pestis Nepal516] gi|145598157|ref|YP_001162233.1| transport system permease [Yersinia pestis Pestoides F] gi|149365800|ref|ZP_01887835.1| putative transport system permease [Yersinia pestis CA88-4125] gi|153949819|ref|YP_001400823.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|165927246|ref|ZP_02223078.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938542|ref|ZP_02227098.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010611|ref|ZP_02231509.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210486|ref|ZP_02236521.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400827|ref|ZP_02306333.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167424872|ref|ZP_02316625.1| ABC transporter , permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466995|ref|ZP_02331699.1| ABC transporter , permease protein [Yersinia pestis FV-1] gi|170024194|ref|YP_001720699.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|186895593|ref|YP_001872705.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|218929379|ref|YP_002347254.1| putative transport system permease [Yersinia pestis CO92] gi|229837803|ref|ZP_04457962.1| putative transport system permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229894962|ref|ZP_04510140.1| putative transport system permease [Yersinia pestis Pestoides A] gi|229898364|ref|ZP_04513511.1| putative transport system permease [Yersinia pestis biovar Orientalis str. India 195] gi|229902209|ref|ZP_04517330.1| putative transport system permease [Yersinia pestis Nepal516] gi|270490685|ref|ZP_06207759.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|21958952|gb|AAM85679.1|AE013814_7 putative inner membrane permease for ABC transporter [Yersinia pestis KIM 10] gi|45436729|gb|AAS62283.1| putative transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51589815|emb|CAH21447.1| putative ABC taurine/sulfonate transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108775557|gb|ABG18076.1| transport system permease [Yersinia pestis Nepal516] gi|108779543|gb|ABG13601.1| putative transport system permease [Yersinia pestis Antiqua] gi|115347990|emb|CAL20915.1| putative transport system permease [Yersinia pestis CO92] gi|145209853|gb|ABP39260.1| transport system permease [Yersinia pestis Pestoides F] gi|149292213|gb|EDM42287.1| putative transport system permease [Yersinia pestis CA88-4125] gi|152961314|gb|ABS48775.1| ABC transporter , permease protein [Yersinia pseudotuberculosis IP 31758] gi|165913416|gb|EDR32037.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920914|gb|EDR38162.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990313|gb|EDR42614.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207666|gb|EDR52146.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167049680|gb|EDR61088.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056059|gb|EDR65837.1| ABC transporter , permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750728|gb|ACA68246.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|186698619|gb|ACC89248.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|229681105|gb|EEO77200.1| putative transport system permease [Yersinia pestis Nepal516] gi|229688654|gb|EEO80723.1| putative transport system permease [Yersinia pestis biovar Orientalis str. India 195] gi|229694169|gb|EEO84216.1| putative transport system permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702057|gb|EEO90078.1| putative transport system permease [Yersinia pestis Pestoides A] gi|262362187|gb|ACY58908.1| putative transport system permease [Yersinia pestis D106004] gi|262365521|gb|ACY62078.1| putative transport system permease [Yersinia pestis D182038] gi|270339189|gb|EFA49966.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|320014943|gb|ADV98514.1| putative transport system permease [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 273 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 35/207 (16%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV++ +I +++ +P+G+W+G + + P Q L P + PL + Sbjct: 80 SIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPLAM------- 132 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW L L+ G + IL N IAG + A + +R II Sbjct: 133 ----LWFGLGNPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQATMFRRII 188 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE--------KG 550 LP PY +TG G A+ IV+E+ + +G+G I E+ E G Sbjct: 189 LPAATPYILTGMRVGIGTAFICVIVAEMIA------VNSGVGYRILEAREYMWSDKVIAG 242 Query: 551 SFPEVVLGVLIMCCFVLALNRFL--WH 575 F LG++I C LNR L WH Sbjct: 243 MFTIGFLGLVIDLCMD-RLNRRLLRWH 268 >gi|330874200|gb|EGH08349.1| taurine ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 285 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G+++ Y D LG ++ R+ + + A++ IPVGI IG P + Sbjct: 73 GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEF 131 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL+V + L L L IF I G A Sbjct: 132 YRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPTRVRAAQ 187 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S T W+ R++I+P P +TG G W+ + +E+ + T+GLG + Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQ 241 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 + + VVLG+L++ A+ Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267 >gi|329906592|ref|ZP_08274444.1| binding-protein-dependent transport systems inner membrane component [Oxalobacteraceae bacterium IMCC9480] gi|327547230|gb|EGF32082.1| binding-protein-dependent transport systems inner membrane component [Oxalobacteraceae bacterium IMCC9480] Length = 277 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 4/144 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV ++++I+ IP+G+ IG + + ++P PA F PL++ V Sbjct: 84 ISIGRVFGGFLLSAILAIPIGVMIGTYAPVRALLEPLTDFSRYLPAVAFIPLIMLWVG-- 141 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ + L+++ + GT + ++ + + PN E A + T R +++P P Sbjct: 142 -IDESAKLTVIFV-GTFFQMVLMLAEDIALVPNQPVEAARTMGATNSEIVRLVLIPAARP 199 Query: 505 YYVTGAITACGGAWNASIVSEVAS 528 + G AW +V+E+ + Sbjct: 200 AMLDTLRQTMGLAWTYLVVAELVA 223 >gi|167562868|ref|ZP_02355784.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167570055|ref|ZP_02362929.1| aliphatic sulfonate ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 272 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + I N G + E+ Sbjct: 112 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPIYINTYHGIRSVDAGLVEM 167 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 168 ARSYGVKGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 221 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G + Sbjct: 222 TMNAREFLQTDVVVVGILLYAALGKLADVLAKWLERATLRWHPAYQPGAQA 272 >gi|73541663|ref|YP_296183.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gi|72119076|gb|AAZ61339.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 267 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ P PLV+ ++ ++ L L+ G + + N G A E+ Sbjct: 110 QMVRNIPTLALIPLVIL---WFGIDETAKL-FLVALGVFFPVYLNTFHGIRAVDPGLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ ++GWR +R +ILPG P + G + G W IV+E S +G+G Sbjct: 166 ARSYGLSGWRLYREVILPGALPNILVGVRFSLGLMWVILIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVL---IMCCFVLALNRFL------WHPLY 578 + E V++G+L ++ L+R L WHP Y Sbjct: 220 TMNAREFLQTDVVLVGILLYALLGKLADVLSRGLERIWLRWHPGY 264 >gi|325285649|ref|YP_004261439.1| ABC-type transporter, integral membrane subunit [Cellulophaga lytica DSM 7489] gi|324321103|gb|ADY28568.1| ABC-type transporter, integral membrane subunit [Cellulophaga lytica DSM 7489] Length = 366 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 13/190 (6%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A II +P+G+ IG P + S F Q+ V++ LV V ++ + + Sbjct: 171 LLALIIAVPIGVIIGLSPSLRSAFNWFIQIFKPVSPVVWYLLVFMIVKTLYIGASSDNAF 230 Query: 455 LMIFGT-----QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 ++ F + W L N G S+ D+ VA + ++ +ILP P TG Sbjct: 231 VISFVSVGLCAMWATLVNTAMGVSSVDKDYINVAKVLKLGTFQKVFKVILPSSLPLIFTG 290 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 AW I E+ + ++ GLG ++ E + G+ +I+ FV+ + Sbjct: 291 LRITLSVAWMVLIAIELLA------QSPGLGLFVWEEFQNGANDSN--AKIIVAMFVIGI 342 Query: 570 NRFLWHPLYL 579 FL L L Sbjct: 343 IGFLLDRLML 352 >gi|298489302|ref|ZP_07007318.1| Alkanesulfonates transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156201|gb|EFH97305.1| Alkanesulfonates transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 265 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D++ +LYA+L L L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDIVVQAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573 G W IV+E S ++G+G Y+A + + ++V+ +++ + L Sbjct: 191 GFMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDIVVQAIVLYAVLGKLADLAA 243 Query: 574 ---------WHPLY 578 WHP Y Sbjct: 244 RGLERVCLRWHPAY 257 >gi|320539791|ref|ZP_08039450.1| putative taurine transporter subunit [Serratia symbiotica str. Tucson] gi|320029977|gb|EFW11997.1| putative taurine transporter subunit [Serratia symbiotica str. Tucson] Length = 278 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 10/163 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R++ ++ A II IPVG +G + + P ++ P + PL+V Sbjct: 86 SLGRIMAALLAAVIIGIPVGFAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIGE 145 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L +S L IF + + +AG + A + W+ R+++LP P Sbjct: 146 TSKILLIS-LAIFAP---VTLSAMAGVRSVARVRVRAARTLGANRWQVLRFVVLPSALPE 201 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G W+ + +E+ + T GLG + + E Sbjct: 202 MLTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 238 >gi|318061285|ref|ZP_07980006.1| ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318078276|ref|ZP_07985608.1| ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 303 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 47/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G + + +T +L IW ++ R + ++A +I P+G+ + + + I P Sbjct: 86 GELSDAWTRGKLLGYIW---TSVSRGLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSG 142 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ + P V + LN + +++++ G I +++G P + Sbjct: 143 LQSLPSVAWVP---PAVLWLGLNSPMMYAVILL-GAVPSIANGLVSGVDQVPPLYLRAGR 198 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543 + TG R +I+LP P Y+ G +W + + +E +AS + + GLG + Sbjct: 199 TLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI---GLGQLL 255 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 S V L + ++ +A++ ++ PL R LR Sbjct: 256 ENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLE---RRVLR 295 >gi|167422071|ref|ZP_02313824.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|166958883|gb|EDR55904.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] Length = 259 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 35/207 (16%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV++ +I +++ +P+G+W+G + + P Q L P + PL + Sbjct: 66 SIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPLAM------- 118 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW L L+ G + IL N IAG + A + +R II Sbjct: 119 ----LWFGLGNPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQATMFRRII 174 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE--------KG 550 LP PY +TG G A+ IV+E+ + +G+G I E+ E G Sbjct: 175 LPAATPYILTGMRVGIGTAFICVIVAEMIA------VNSGVGYRILEAREYMWSDKVIAG 228 Query: 551 SFPEVVLGVLIMCCFVLALNRFL--WH 575 F LG++I C LNR L WH Sbjct: 229 MFTIGFLGLVIDLCMD-RLNRRLLRWH 254 >gi|294084957|ref|YP_003551717.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664532|gb|ADE39633.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322] Length = 296 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 26/197 (13%) Query: 68 TTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TL ++S A +I + F L A+S R ++ PILDIMQ+IP +L V M L Sbjct: 102 ATLAIISVATLICIGFGIPLGILMARSNRAQSIITPILDIMQTIPSFVYLIPVV---MLL 158 Query: 127 YPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GKV G I+AI ++ N+ + + +++ E + +F + Q+ + + + Sbjct: 159 GIGKVPGMIAVCIYAIPPIVRLTNLGIRL------VDKEVLEAADAFGANYKQRLFGVQI 212 Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 P ++P G+ +MM+++ M+V+ ++I + G+G + A+ Q L Sbjct: 213 PLALPNIFAGVNQTIMMALA----------MVVIA-SMIGVKGLGVPVLQAVANQYLALG 261 Query: 242 LYAMLTMLGVIFLYDQL 258 L L ++ + ++D++ Sbjct: 262 LMNGLAIVALAIIFDRV 278 >gi|254562523|ref|YP_003069618.1| ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|254269801|emb|CAX25774.1| ABC superfamily transporter membrane protein [Methylobacterium extorquens DM4] Length = 291 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +LP + + R+LS + +L +SR +L+P L++++ IP + ++ Sbjct: 89 ALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLA 148 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F + +E++ F FT ++ + + + ++ L +RS Sbjct: 149 ILMFPS--------SEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAI 200 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P + P +V + M WF +V +EMI Sbjct: 201 LREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMI 234 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + A + + +G+ IG + P ++L PA + PL + Sbjct: 97 SLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFPSSE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ ++ + G + IL N + G + A S R +ILPG P Sbjct: 157 VS----MAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPS 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 VTGA G AW + +E+ S + G+G + ES ++ ++V+G+L++ Sbjct: 213 IVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLI 263 >gi|111018598|ref|YP_701570.1| ABC transporter, permease component [Rhodococcus jostii RHA1] gi|110818128|gb|ABG93412.1| ABC transporter, permease component [Rhodococcus jostii RHA1] Length = 273 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 10/128 (7%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 +AS T L +SLLF + A L S L VP+ + Q++PI+ +++F Sbjct: 73 HASATLQVTLIGFAVSLLFAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWF 132 Query: 124 -MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 L P K++ LA F MT + + R+ + RS S WQ+F Y Sbjct: 133 GFGLLP-KILVIALATFF--------PMTIGLIEGFAAADREAGALLRSMGASRWQEFRY 183 Query: 183 LGVPFSMP 190 + +P ++P Sbjct: 184 VRLPSAIP 191 >gi|91777143|ref|YP_552351.1| glycine betaine/choline/proline ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689803|gb|ABE33001.1| ABC glycine betaine/choline/proline family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 238 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 I +I +IP L L + F IG ++ A+ A+F + + +T + Y+ + N+ Sbjct: 82 IFNIGNTIPSLAVLAIALGIFG-------IG-DIPALIALFLASLLPITRNAYEGMKNVS 133 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 L E +R ++GWQ + +P +MP ++ + +++ Sbjct: 134 PALREAARGLGMTGWQSLLRVELPNAMPIIIGGVRTALA 172 >gi|16077368|ref|NP_388181.1| glycine betaine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221308115|ref|ZP_03589962.1| glycine betaine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|221312438|ref|ZP_03594243.1| glycine betaine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317371|ref|ZP_03598665.1| glycine betaine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. JH642] gi|221321636|ref|ZP_03602930.1| glycine betaine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. SMY] gi|321313969|ref|YP_004206256.1| glycine betaine ABC transporter permease [Bacillus subtilis BSn5] gi|1171920|sp|P46921|OPUAB_BACSU RecName: Full=Glycine betaine transport system permease protein opuAB gi|984804|gb|AAC43456.1| transmembrane protein [Bacillus subtilis] gi|1805371|dbj|BAA08933.1| glycine betain/L-proline transmembrane protein [Bacillus subtilis] gi|2632585|emb|CAB12093.1| glycine betaine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|291482686|dbj|BAI83761.1| glycine betaine ABC transporter, permease [Bacillus subtilis subsp. natto BEST195] gi|320020243|gb|ADV95229.1| glycine betaine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 282 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 85/169 (50%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +L++++IS++ A++ + ++ PILD+MQ++P +L ++F N+ Sbjct: 92 QTLALVLTSVIISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ MT + +P DL E + +F + Q+ + + +P Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTAQRLFKVQLP 203 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + ++ + S+ ++A M+V+ ++ PG+GS + A+ + Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245 >gi|228946522|ref|ZP_04108837.1| aliphatic sulfonates transport permease protein ssuC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813135|gb|EEM59441.1| aliphatic sulfonates transport permease protein ssuC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 282 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 10/180 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++FR I + I +G +GF + P Q+L P PL V + Sbjct: 83 SISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGF 142 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ G + + NV G + +VA + + +ILP Sbjct: 143 GETSK----VLLIADGAFFPLYVNVFLGIRGVDSKLFDVARVLEFSKRKLITKLILPATL 198 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + GA + G AW + +V+E+ T G+G I ++ + + V +G++I Sbjct: 199 PNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFA 252 >gi|188586238|ref|YP_001917783.1| binding-protein-dependent transport systems inner membrane component [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350925|gb|ACB85195.1| binding-protein-dependent transport systems inner membrane component [Natranaerobius thermophilus JW/NM-WN-LF] Length = 278 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 25/172 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L+A +++L LA+K+ + ++ P+LD MQ++P +L V++F + L PG Sbjct: 102 ILTAGIVALGLGIPIGILASKNEVVNTIVRPVLDFMQTMPAFVYLIPAVIFFSLGLVPGV 161 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + IFA+ + F + Q + +++ E R+F + Q + + +P ++P Sbjct: 162 I----ATVIFAM-PPAIRLTNFGIRQ----VDKEVIEAGRAFGSTSSQLLFKVQLPLAVP 212 Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +M+S+S VV + MI G G+G+ + I + D+ Sbjct: 213 TIMAGVNQTIMLSLS----MVVIASMIGAG-------GLGNIVLRGITQLDI 253 >gi|253686557|ref|YP_003015747.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753135|gb|ACT11211.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 532 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 44/219 (20%), Positives = 100/219 (45%), Gaps = 29/219 (13%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 +P ++V +PI+L LR+ + V +L +RRL + +P+ Sbjct: 71 IPEELVHQLPISL-------------LRLAIGFSGGIALGLVLGSLFGLNRRLNALFMPL 117 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 ++ IP L ++ ++ IG L + + + V +T + P+ Sbjct: 118 FTVIAQIPTLAWIPLLMLSLG-------IGEALKLVVLVKSVTV-PVTLYTCAGIQQTPQ 169 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS RL YL +P +P ++ + ++ S GW ++A E++ + Sbjct: 170 KLHEMARSLRLPPAAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------ 223 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261 G+G Y+ + ++ +L +++ + ++G++ F +++L + Sbjct: 224 GLG-YLLVQSRQLFMLDLVFVCILIIGILGFAGERVLLK 261 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AG P E+A S + + RY+ILP + PY +TG A W A I E+ + Sbjct: 162 AGIQQTPQKLHEMARSLRLPPAAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLA- 220 Query: 530 GHIHLRTTGLGAYIAESTE 548 + GLG + +S + Sbjct: 221 -----SSEGLGYLLVQSRQ 234 >gi|330961885|gb|EGH62145.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 265 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 21/152 (13%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTML 249 GIG Y+A+ +E D++ +LYA+L L Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKL 238 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|291617525|ref|YP_003520267.1| OpuCB [Pantoea ananatis LMG 20103] gi|291152555|gb|ADD77139.1| OpuCB [Pantoea ananatis LMG 20103] gi|327393962|dbj|BAK11384.1| glycine betaine/carnitine/choline transport system permease protein OpuCB [Pantoea ananatis AJ13355] Length = 215 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P+LG T T+ F + P GK IGA L AI A+F + + + + +L Sbjct: 50 ATPVLGIATVVLTIPTIALFGLMIPLFSLIGKGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 N+P L E R ++ WQ+ ++ +P ++P Sbjct: 109 ENLPDGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|227544762|ref|ZP_03974811.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908991|ref|ZP_07126454.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|227185248|gb|EEI65319.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894398|gb|EFK87756.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] Length = 221 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 20/220 (9%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP--- 420 +G I+ +F Y ++G + VV L+I + II +P+G +I S+I+P Sbjct: 7 LGQIIQYFQTNSGQYWQYVGQHIILTVVTLVI-SMIIALPLG-------YIGSRIKPVAQ 58 Query: 421 ----FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 FAQLL P+ L++ + + + L +L + +L N I G + Sbjct: 59 FCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALIALIVLAL----PPLLINTILGFNEVS 114 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTG-AITACGGAWNASIVSEVASWGHIHLR 535 +KEV + + R R I +P PY + G + +A++ + + + G L Sbjct: 115 PLYKEVGIALGMDQRRLRRQIEIPLALPYILNGIKLALVEIIASATLATYIGAGGLGTLI 174 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TGLG Y G+ +L +L M F + + H Sbjct: 175 FTGLGLYDMSYVVIGAVSVAILSLLAMISFDFLIRKVQKH 214 >gi|254461891|ref|ZP_05075307.1| glycine betaine/L-proline transport system permease protein [Rhodobacterales bacterium HTCC2083] gi|206678480|gb|EDZ42967.1| glycine betaine/L-proline transport system permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 517 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 II IP+G++ RP S IQP + PA VF ++ ++++ + MIF Sbjct: 349 IIGIPLGMFAARRPRFYSFIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 405 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + V+ G P +E A SF W + LP P G Sbjct: 406 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTKVDLPLAGPSIRAG 455 >gi|261409048|ref|YP_003245289.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] gi|261285511|gb|ACX67482.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] Length = 277 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 27/170 (15%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +++A +IS++ AA S+ V++P+LD MQ++P +L V +F + + PG Sbjct: 94 VITAALISVILGVPLGIWAAYSKSASRVIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGV 153 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + + IFAI T + + + + +L E + +F + QK + + +P +M Sbjct: 154 IA----SVIFAI------PPTIRLTRLGIMQVSGELTEAADAFGSTSGQKLFKVQLPLAM 203 Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 P G+ +M+S+S M+V+ ++I GIG+ + A+ + Sbjct: 204 PTLMAGINQTIMLSLS----------MVVIA-SMIGAQGIGAEVYRAVTQ 242 >gi|28872427|ref|NP_795046.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213971162|ref|ZP_03399280.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382291|ref|ZP_07230709.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302061543|ref|ZP_07253084.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302134778|ref|ZP_07260768.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855682|gb|AAO58741.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924031|gb|EEB57608.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331017056|gb|EGH97112.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 265 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D++ +LYA+L L L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|56962846|ref|YP_174572.1| glycine betaine ABC transporter permease [Bacillus clausii KSM-K16] gi|56909084|dbj|BAD63611.1| glycine betaine ABC transporter permease [Bacillus clausii KSM-K16] Length = 278 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 27/173 (15%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L+A +IS++ L AK+ R ++ P+LD MQ++P +L V +F + + PG Sbjct: 97 VLTACLISVVIGVPVGILMAKNDRTEAIIKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGV 156 Query: 131 VIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS- 188 V + IFA+ T ++ N+ + + +L E + +F +G QK + + +P + Sbjct: 157 VA----SVIFAMPPTVRMTNL------GIRQVSTELIEAADAFGSTGTQKLFKVQLPMAR 206 Query: 189 ---MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ + M+++S VV + MI G T GIG + A+ + ++ Sbjct: 207 GTIMAGINQSTMLALS----MVVIAAMI--GAT-----GIGQVVYSAVGQNNI 248 >gi|222102602|ref|YP_002539641.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221739203|gb|ACM39936.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 285 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 65 ASRTTLRMLSAMV-ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 AS TL +++ V IS+L F LA++ RR+ ++ P+LDIMQ++P +L V+ F Sbjct: 90 ASMQTLALVTVSVCISVLIAFPLGILASRHRRVETIIRPLLDIMQTVPPWVYLIPAVMIF 149 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 G+V AI A + M + +P+DL E+ ++ S + + Sbjct: 150 SL---GRV-----PAIIATIVYGIPPMLRLTTLAFNQVPKDLLELGQATGASPRAILFKI 201 Query: 184 GVPFSMPGLVWNM 196 +P + P L+ + Sbjct: 202 EIPAATPTLLVGL 214 >gi|163758500|ref|ZP_02165588.1| glycine betaine/L-proline transport system permease, putative [Hoeflea phototrophica DFL-43] gi|162284789|gb|EDQ35072.1| glycine betaine/L-proline transport system permease, putative [Hoeflea phototrophica DFL-43] Length = 513 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+G++ RP S IQP + PA VF ++ ++++ + MIF Sbjct: 345 LIGIPLGMFCARRPRFYSFIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 401 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + V+ G P+ +E A SF W + LP P G Sbjct: 402 GGTPVVRLTVL-GLRGVPDSVREAAISFGANKWYLLTRVDLPLASPSIRAG 451 >gi|304392892|ref|ZP_07374823.1| binding-protein-dependent transport systems inner membrane component [Ahrensia sp. R2A130] gi|303294890|gb|EFL89259.1| binding-protein-dependent transport systems inner membrane component [Ahrensia sp. R2A130] Length = 523 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 30/200 (15%) Query: 68 TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL +L +A +S+L L A+ RL V+ PI+D MQ++P F+ + +F Sbjct: 341 TTLALLGTAACLSILIGIPLGMLCARRHRLYAVIQPIMDFMQTMPAFVFMIPVIAFFGTG 400 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYL 183 P V+ T+ ++ T + + L +P + E + SF S W + Sbjct: 401 KPAAVV-----------TTMIFGGTPVVRLTVLGLRGVPEAVREAAISFGASKWYLLTRV 449 Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 +P + P G+ +M+S++ M+VV ++I G+G + A++ ++ Sbjct: 450 DLPLAAPSIRAGINQTIMLSLA----------MVVVA-SLIGAKGLGEDVLEALQYANVG 498 Query: 240 AILYAMLTMLGVIFLYDQLL 259 + A ++L + D+++ Sbjct: 499 QGILAGFSILFCAMILDRIV 518 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+G+ R + + IQP + PA VF ++ ++++ + MIF Sbjct: 355 LIGIPLGMLCARRHRLYAVIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 411 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + V+ G P +E A SF + W + LP P G Sbjct: 412 GGTPVVRLTVL-GLRGVPEAVREAAISFGASKWYLLTRVDLPLAAPSIRAG 461 >gi|297197996|ref|ZP_06915393.1| binding-protein-dependent transport system inner membrane component [Streptomyces sviceus ATCC 29083] gi|197715001|gb|EDY59035.1| binding-protein-dependent transport system inner membrane component [Streptomyces sviceus ATCC 29083] Length = 665 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 43/203 (21%), Positives = 91/203 (44%), Gaps = 15/203 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L + L Q + T LSA++++LLF A S R+ ++ P LD MQ++P + + Sbjct: 148 LGLQGLWQESMDTLSLTLSAVLVALLFAIPLGVWAGLSERVNRIVTPFLDFMQTMPTMVY 207 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L ++F+ IG A I + + + + + ++ ++P E + S + Sbjct: 208 LAPLTLFFL-------IGGASATIATVIYAAPPALRITAH-AIRSVPPTTVEAAESMGAT 259 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 Q + +P S +V + + ++A+ +V +I PG+G + A++ Sbjct: 260 RRQSLLKVLLPMSRRTVVMGVNQT-------IMAALAMVTIAALIDAPGLGKTVVQALQS 312 Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258 D+ A L ++ + + D++ Sbjct: 313 LDVGTAFNAGLAIVVMAIVLDRV 335 >gi|170735077|ref|YP_001774191.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169821115|gb|ACA95696.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 238 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + +I +IP L L + F IG + AI A+F + + +T + Y+ + N+P Sbjct: 82 VFNIGNTIPSLAVLAIALGIFG-------IG-NVPAIVALFLASLLPVTRNAYEGMKNVP 133 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 L E ++ ++GWQ + +P ++P +V + +++ Sbjct: 134 AALREAAKGIGMTGWQSLVRVELPNALPIIVGGVRTALA 172 >gi|83716128|ref|YP_439164.1| glycine betaine/L-proline ABC transporter permease [Burkholderia thailandensis E264] gi|167577605|ref|ZP_02370479.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Burkholderia thailandensis TXDOH] gi|167615750|ref|ZP_02384385.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Burkholderia thailandensis Bt4] gi|257142284|ref|ZP_05590546.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Burkholderia thailandensis E264] gi|83649953|gb|ABC34017.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Burkholderia thailandensis E264] Length = 300 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ ++SL+ AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIVSLVLGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ +T + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAM--PPAVRLT---SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|78044059|ref|YP_359638.1| phosphate ABC transporter permease [Carboxydothermus hydrogenoformans Z-2901] gi|77996174|gb|ABB15073.1| phosphate ABC transporter, permease protein [Carboxydothermus hydrogenoformans Z-2901] Length = 289 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 +L ++PR LEE S + + WQ W++ +P + PG++ +++ M+ +A +M V+ Sbjct: 164 DALRSVPRSLEEASYALGATRWQTIWHVLLPAAAPGIITGLVLGMARAIGETMAVQM-VI 222 Query: 216 GDT 218 G+T Sbjct: 223 GNT 225 >gi|225619832|ref|YP_002721089.1| putative ABC transporter permease [Brachyspira hyodysenteriae WA1] gi|225214651|gb|ACN83385.1| putative ABC transporter, permease protein [Brachyspira hyodysenteriae WA1] Length = 242 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 42/217 (19%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 S +FPNI ++LA L+ I E + +D++ + LR Sbjct: 29 SEILFPNIQNILAK---------LIEIISEKSFYKDLLS-----------------SLLR 62 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L +S L F+ A L L+PI++ +++IP + + +++F N P Sbjct: 63 VLITFALSFLSAFIIGISAGIFLPLRYTLIPIINFIRTIPTIPLILVAIIWFDNNTVP-- 120 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 I + IF I + N + N+ + L E+S S+ +S + L +P+ P Sbjct: 121 -IFVSMLVIFPIIYDSITN-------GIINVDKKLIEMSISYNVSIKTQIINLYIPYIKP 172 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 + + SM W ++A+E++ +P GIG+ Sbjct: 173 YIFTGISQSMGITWKSILAAEIL-----ALPALGIGT 204 >gi|254486686|ref|ZP_05099891.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. GAI101] gi|214043555|gb|EEB84193.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. GAI101] Length = 264 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 18/155 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSL 158 LVP++ + IP + L V++F G + A+ FA+ + T + Y ++ Sbjct: 107 LVPLVAALFPIPKIALLPLFVIWF---------GIDEASKFALIAFGTFTPTVVATYAAV 157 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF L+ W + +P +MPG++ + +S++ +VA+EM+ G Sbjct: 158 DNVDRSLIRMGQSFGLTWWSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAE 215 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGV 251 GIG+YI A DL + +L++LGV Sbjct: 216 Y----GIGAYILEAGSLYDLERLFAGVVILSVLGV 246 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 10/180 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ V I + I I VG+ IG ++ + + P L P PL V ++ Sbjct: 75 SLSRLAVGATIGASIGIAVGVMIGLFSYVRAGLVPLVAALFPIPKIALLPL---FVIWFG 131 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ +L+ FGT + A + SF +T W R I+LPG P Sbjct: 132 IDEASKFALIA-FGTFTPTVVATYAAVDNVDRSLIRMGQSFGLTWWSIVRKIVLPGAMPG 190 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 ++G + A + +E+ + G+GAYI E+ + GV+I+ Sbjct: 191 ILSGLRISLAIAIILLVAAEMLGAEY------GIGAYILEAGSLYDLERLFAGVVILSVL 244 >gi|254386759|ref|ZP_05002051.1| ABC transporter permease [Streptomyces sp. Mg1] gi|194345596|gb|EDX26562.1| ABC transporter permease [Streptomyces sp. Mg1] Length = 307 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 375 DVLYVIWLGCI-------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 D L +WLG ++ R ++ ++A I P+G+ + + + I P Q L + Sbjct: 90 DSLADMWLGGTLLEVIWTSVSRGLLGFLLALAIGTPLGLLVARVKFVRAAIGPILQGLQS 149 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P+ + P V ++ LN + +++++ G I +++G P F + Sbjct: 150 LPSVAWVP---PAVLWFGLNDAMMYTVILL-GAVPSIANGLVSGIDQVPPLFLRAGRTLG 205 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 TG R R++++P P Y+ G +W + + +E+ Sbjct: 206 ATGLRGARHVVMPAALPGYLAGLKQGWAFSWRSLMAAEI 244 >gi|167041562|gb|ABZ06310.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_008G09] Length = 295 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 23/172 (13%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R+ ++P+LD+MQ+IP +L + M L GKV G I+A+ + + Sbjct: 126 ARSTRVQAAILPVLDMMQTIPSFVYL---IPILMLLGIGKVPGLIAVCIYAV--PPIIRL 180 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + + ++ E +F + WQ+ + +P ++P G+ +MM+++ Sbjct: 181 T---NLGIREVDKEALEAIDAFGATAWQRLTKVQIPLALPTIFAGVNQTIMMALA----- 232 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV ++I + G+G I AI Q L L L ++ + ++D++ Sbjct: 233 ------MVVIASMIGVRGLGVPILRAISNQYLALGLMNGLAIVALAIIFDRI 278 >gi|310824496|ref|YP_003956854.1| glycine betaine/l-proline ABC transporter permease and substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|309397568|gb|ADO75027.1| Glycine betaine/L-proline ABC transporter, permease and substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 510 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 10/126 (7%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV-VYFMNLYPGKVIG 133 ++V S+L LAA+ RLG +++ + I+Q++P L L F + + + P Sbjct: 315 SLVASVLVAVPLGVLAARRARLGRLVLGLASIIQTVPSLALLVFMIPLLGIGTRP----- 369 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AI A+F + + + L I DL E + + L + W + +P + P L+ Sbjct: 370 ----AIMALFLYGLLPIVRNTAAGLSGIAGDLRESAEALGLPPRARLWRIELPLAAPSLL 425 Query: 194 WNMMMS 199 + + Sbjct: 426 AGIQTA 431 >gi|89076527|ref|ZP_01162838.1| ABC-type proline/glycine betaine transport system, permease component [Photobacterium sp. SKA34] gi|330448148|ref|ZP_08311796.1| choline ABC transporter, permease protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|89047803|gb|EAR53400.1| ABC-type proline/glycine betaine transport system, permease component [Photobacterium sp. SKA34] gi|328492339|dbj|GAA06293.1| choline ABC transporter, permease protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 280 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L ++A L ++ PILD+MQ++P +L T+V Sbjct: 91 QEMLETFVLVFAATSISVLIGVPIGIMSAHRPWLYTLMRPILDLMQTVPTFVYLIPTLVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P DL E ++F S + Sbjct: 151 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGITKVPEDLIEAGKAFGASRMKLLL 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 202 KVELPAAMPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVVRALNTVNISQG 254 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 255 FEAGLAIVLVAIILDRLCKTP 275 >gi|315647564|ref|ZP_07900666.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] gi|315277003|gb|EFU40344.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] Length = 243 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +RV++ + S+I IP G+ IG I +PF + P F L + Sbjct: 44 ISSYRVLLGWTLGSLIAIPAGLVIGKVGTIRVFAEPFLNFIRFIPPIAFITLFLVWFGIG 103 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+++ T + ++ N + G + D A S + W+ ++I+P P Sbjct: 104 ETSK----VMLIMYATFFIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLHVIIPATVP 159 Query: 505 YYVTGAITACGGAWNASIVSEV 526 Y TG A G ++ A I +E+ Sbjct: 160 YMFTGIRLAMGTSFMAIIGAEM 181 >gi|229844555|ref|ZP_04464695.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 6P18H1] gi|229812804|gb|EEP48493.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 6P18H1] Length = 245 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + A L + SR++ VL+PIL I Q+IP+ V++F K++ + L F + Sbjct: 74 ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 T + Y L N P+ +++++F +S + + +P ++P + +++S Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259 VA VVG+ V G+G Y+ + + + +++A L +L I F D LL Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVAISLCLYFSIDWLL 238 Query: 260 FRPMIVWS 267 R +WS Sbjct: 239 HR--FIWS 244 >gi|15678941|ref|NP_276058.1| anion transport system permease protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2622018|gb|AAB85419.1| anion transport system permease protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 269 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P+ I+D +HS+ +T+ L M+ +LL + +L+ S R ++ +L Sbjct: 37 PQSILDSFRSADMIHSVKLSLLTSTITTLIVMLSALLIAY---SLSEDSFRGKSIVKTVL 93 Query: 105 DIMQSIP-------ILGFLTFT-VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 DI ++P +L FL T + Y M+ +++ +L I A F + Y Sbjct: 94 DIPIALPEILIGIMLLIFLGNTPLNYMMDGLGIQIVFTDLGVICAQFFVSLPYTVRICYS 153 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG--GWFFVVASEMIV 214 + CNI R L+ VSRS + ++ F + +P S G++ +++ S G F V +IV Sbjct: 154 TFCNIDRRLKFVSRSLGYTEFETFRNIMIPLSRDGILAATIITFSRCIGCFGAV---LIV 210 Query: 215 VGDT 218 G T Sbjct: 211 AGGT 214 >gi|302188523|ref|ZP_07265196.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae 642] Length = 265 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 23/177 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|284166069|ref|YP_003404348.1| binding-protein-dependent transporters inner membrane component [Haloterrigena turkmenica DSM 5511] gi|284015724|gb|ADB61675.1| binding-protein-dependent transport systems inner membrane component [Haloterrigena turkmenica DSM 5511] Length = 279 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 5/141 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++F V +++ + I VG+ +G+ + ++P +LL P + V +H Sbjct: 91 SLFHYVPGLVVGNAAGIAVGVAMGWSTRVDDYLRPVVRLLRPIPPLAWVVFAVLWFGIHH 150 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFP 504 + ++ G W L+ +G + EVAS + + W+ R ++LP P Sbjct: 151 TGA----AFIVFVGAFWITLYGAYSGVEGVSRGYIEVASGLGVESDWQMIRLVVLPAAAP 206 Query: 505 YYVTGAITACGGAWNASIVSE 525 +T T+ G W + +E Sbjct: 207 SVLTAVRTSIGRCWMIVVGAE 227 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 9/121 (7%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S R+ L P++ +++ IP L ++ F V++F + G A F +F W + Sbjct: 116 STRVDDYLRPVVRLLRPIPPLAWVVFAVLWFGIHHTG--------AAFIVFVGAFWITLY 167 Query: 153 SMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 Y + + R EV+ + S WQ + +P + P ++ + S+ W VV +E Sbjct: 168 GAYSGVEGVSRGYIEVASGLGVESDWQMIRLVVLPAAAPSVLTAVRTSIGRCWMIVVGAE 227 Query: 212 M 212 + Sbjct: 228 L 228 >gi|260769404|ref|ZP_05878337.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio furnissii CIP 102972] gi|260614742|gb|EEX39928.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio furnissii CIP 102972] Length = 368 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ PILD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSDTAAKIVRPILDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P +L E +F S Q + + +P +MP G+ +M+S+S Sbjct: 227 TILGIQ---QVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|227113615|ref|ZP_03827271.1| glycine betaine transporter membrane protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 417 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R + P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 233 ARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 287 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 288 TI---LGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 340 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 341 VVIASMIAVG-------GLGQMVLRGIGRLDM 365 >gi|114705345|ref|ZP_01438253.1| Binding-protein-dependent transport systems inner membrane component [Fulvimarina pelagi HTCC2506] gi|114540130|gb|EAU43250.1| Binding-protein-dependent transport systems inner membrane component [Fulvimarina pelagi HTCC2506] Length = 305 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 13/139 (9%) Query: 68 TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL M+ +A+V ++ AA+S + +L PILDIMQ+IP +L V+ F Sbjct: 90 TTLSMIITAVVFCIVLGVPLGIAAARSDKFLSILRPILDIMQTIPSFVYLVPIVMLF--- 146 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G IFA+ + +T + N+ DL E +++F + Q W + +P Sbjct: 147 GVGTVPGVIATIIFAL--PPIIRLT---NLGIRNVRGDLIEAAKAFGSTPRQILWEVQLP 201 Query: 187 FS----MPGLVWNMMMSMS 201 + M GL +M+++S Sbjct: 202 LALRTIMAGLNQTLMLALS 220 >gi|78060663|ref|YP_367238.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965213|gb|ABB06594.1| ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit [Burkholderia sp. 383] Length = 238 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + +I +IP L L + F IG + AI A+F + + +T + Y+ + N+P Sbjct: 82 VFNIGNTIPSLAVLAIALGIFG-------IG-NVPAIVALFLASLLPITRNTYEGMKNVP 133 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 L E ++ ++GWQ + +P ++P +V + +++ Sbjct: 134 AALREAAKGIGMTGWQSLVRVELPDALPIIVGGVRTALA 172 >gi|148256186|ref|YP_001240771.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146408359|gb|ABQ36865.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 286 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 14/215 (6%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D++ + L L Q+A + LR+L + SRR+ + P+ Sbjct: 71 PADVLHTLNEMLASGELAQHAGISLLRVLLGFAVGAGAGLALGAAMGLSRRVDDHVRPLF 130 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 + +P L ++ ++ IG E I I + + + + N+PR Sbjct: 131 TAIAQVPALAWIPLAMLLLG-------IG-ETLKIVVIAKAAFVPVAMNTSAGIANVPRA 182 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L EV +FR S Q ++ +P ++P + + ++ W +V+ E++ + G Sbjct: 183 LVEVGETFRFSPLQMLRHVVLPGAVPPIFTGLRYGLTHAWIALVSVELLASSE------G 236 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +G + + L +L AM+ + + F D+LL Sbjct: 237 LGYLLVWGRQMFWLDTVLVAMIVIGIIGFASDKLL 271 >gi|163859331|ref|YP_001633629.1| ABC transporter permease protein [Bordetella petrii DSM 12804] gi|163263059|emb|CAP45362.1| ABC transporter permease protein [Bordetella petrii] Length = 291 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 LP A ++ +L V + FV TLA S RLG ++ L M + L Sbjct: 86 ELPSRALQSLQVLLKGYVAGIALAFVLTTLAV-STRLGRDVLSTLTAMFNPLPAIALLPL 144 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + + L G + +F + S +W + ++Y +P L R++ L G + Sbjct: 145 ALLWFGLGEGSL-------VFVLVHSVLWALALNIYAGFLAVPETLRMAGRNYGLKGPRY 197 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + VP ++P +V + + + W ++A+E++ Sbjct: 198 VFGILVPAALPAIVAGLRIGWAFAWRTLIAAELV 231 >gi|116492237|ref|YP_803972.1| ABC-type phosphate transport system, permease component [Pediococcus pentosaceus ATCC 25745] gi|116102387|gb|ABJ67530.1| phosphate ABC transporter membrane protein 1, PhoT family [Pediococcus pentosaceus ATCC 25745] Length = 302 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 18/175 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYAT------LAAKSRRLGMVLVPILDIMQSIP 111 V +LP ++ +LSA+ L F AT +A K R +L P+++++ IP Sbjct: 77 VGALPMIVGSFSVTVLSAL---LAAPFAIATAIFMVDIAGKRGR--KILQPVIELLVGIP 131 Query: 112 --ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY-QSLCNIPRDLE 166 + GF+ TVV + ++ G G L+ F +F + +T SMY SL +P+ Sbjct: 132 SVVYGFIGLTVVVPFTRTVFGGTGFGI-LSGTFVLFVMVLPTVT-SMYVDSLKAVPQFYR 189 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 E S + + WQ + + + S+PGL+ ++ M+ + +A +M++ +++P Sbjct: 190 EASLALGATRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNASILP 244 >gi|329936399|ref|ZP_08286164.1| hypothetical protein SGM_1656 [Streptomyces griseoaurantiacus M045] gi|329304195|gb|EGG48076.1| hypothetical protein SGM_1656 [Streptomyces griseoaurantiacus M045] Length = 304 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 14/119 (11%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI--FTSQVWNMTFSMYQSLC 159 P+ ++++ LGF TF V + PG LA +F I F + MY +L Sbjct: 144 PVSSLLET---LGFHTFGEV----IAPGN-----LALLFTIIAFWTGAGGWIVVMYGALN 191 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 NIP+D+ E +R +GWQ W + +P +V+ ++++ +GG V +++ + T Sbjct: 192 NIPKDVMEAARIDGANGWQTAWRVQIPLLRKWIVYMVILAFAGGAQLFVEPQLLSLAST 250 >gi|239628147|ref|ZP_04671178.1| transport protein [Clostridiales bacterium 1_7_47_FAA] gi|239518293|gb|EEQ58159.1| transport protein [Clostridiales bacterium 1_7_47FAA] Length = 251 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 51/246 (20%), Positives = 98/246 (39%), Gaps = 53/246 (21%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 E F + + Y + +FW V WQ+ N + ++++V G + M Sbjct: 3 ETFFMNQNTRIRKYFIWLFWIAV---------WQA----ANMLIHNNIIFV---GPVDMV 46 Query: 389 RVVVLIIIASIIWIPV-----GIWIGFR----------------PHISSKIQPFAQLLAA 427 + ++ ++ S W V I IGF P + ++P L+ + Sbjct: 47 KALLELVRDSSFWASVFNSFAKISIGFLGAFILSILLGCLAYAVPLVKDLLEPMMMLIKS 106 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P F L + + ++L ++ S L++ I + ++G E+A F Sbjct: 107 VPVASFVILALIWIGSHNLA--VFTSFLVVVPM---IYVSTLSGLEHTDRKLLEMAMVFR 161 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS-----------WGHIHLRT 536 + + RYI +P + PY ++G TA G +W + + +EV + ++L T Sbjct: 162 MPLLKQVRYIYIPAVLPYLISGCRTALGMSWKSGVAAEVIGIPEGSIGEQLYYSKLYLDT 221 Query: 537 TGLGAY 542 GL A+ Sbjct: 222 AGLFAW 227 >gi|299822484|ref|ZP_07054370.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Listeria grayi DSM 20601] gi|299816013|gb|EFI83251.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Listeria grayi DSM 20601] Length = 281 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 27/178 (15%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-M 124 ++T +L++ +I+L+ AKS + + P+LD MQ++P +L V +F + Sbjct: 94 TQTLTLVLTSSLIALVVGVPLGIWMAKSEIVESIFKPVLDFMQTMPAFVYLIPAVAFFGI 153 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + PG V + IFA+ T ++ N+ + + ++L E + SF + WQK + + Sbjct: 154 GMVPGVV----ASVIFAMPPTVRMTNL------GIRQVSKELVEAADSFGSTPWQKLFKV 203 Query: 184 GVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P + M G+ ++M+++S M+V+ ++I G+G+ + A+ D Sbjct: 204 QLPMAKSTMMAGINQSIMLALS----------MVVIA-SMIGAMGLGTRVYFAVGRND 250 >gi|158335979|ref|YP_001517153.1| ABC transporter permease [Acaryochloris marina MBIC11017] gi|158306220|gb|ABW27837.1| ABC transporter, permease protein, putative [Acaryochloris marina MBIC11017] Length = 290 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/216 (19%), Positives = 92/216 (42%), Gaps = 10/216 (4%) Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 +G A+ + + + +D + ++ FRV ++ASI+ +P+GI +G + S Sbjct: 71 VGTAFVDLWHQYDTLNQKDTYPLFQATLMSCFRVGSGFLLASILAVPMGIGMGAFASLRS 130 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 +P ++ PA F PL+ + Y L ++L+ I GT ++ + ++ P Sbjct: 131 LGEPIIGIVRYMPAPAFIPLL---LIYLGLEEEPKIALIFI-GTIFFNVLMIMDAVKFVP 186 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 + E + + +I P + P + +WN +V+E+ + Sbjct: 187 KELIETTYTLGGNRTQVLLQVITPYVIPRIIDAFRVNMAASWNLVVVAELVA------AD 240 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG I + S ++ + ++++ +L+ F Sbjct: 241 EGLGKRILLAQRFNSVDKIFVCLIVLGLLGFSLDLF 276 >gi|88799388|ref|ZP_01114966.1| ABC transporter, membrane spanning protein [Reinekea sp. MED297] gi|88777927|gb|EAR09124.1| ABC transporter, membrane spanning protein [Reinekea sp. MED297] Length = 319 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 8/119 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+ VI + F+ A LA KSR L + LVP+ + + +IPI+G V++F +P K Sbjct: 126 VLAGYVIGCVSGFIVAQLAVKSRFLELGLVPLGNFVSAIPIVGIAPIMVMWFGFDWPSKA 185 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + F +F + T + QS+ + +DL ++ QKF +P ++P Sbjct: 186 AVIVVMTFFPMFIN-----TLTGLQSVDALHKDLMH---TYAAKSAQKFTTTQLPQALP 236 >gi|84385167|ref|ZP_00988199.1| ABC transporter permease protein [Vibrio splendidus 12B01] gi|84379764|gb|EAP96615.1| ABC transporter permease protein [Vibrio splendidus 12B01] Length = 271 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 113 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 162 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ Y+ +P ++P L + +++ V+A VVG+ Sbjct: 163 LRNTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAV------VIAPIGAVVGE 216 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W N+ Sbjct: 217 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWENQ 271 >gi|329928981|ref|ZP_08282791.1| glycine betaine transport system permease protein opuAB [Paenibacillus sp. HGF5] gi|328937233|gb|EGG33660.1| glycine betaine transport system permease protein opuAB [Paenibacillus sp. HGF5] Length = 277 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 27/170 (15%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +++A +IS++ AA S+ V++P+LD MQ++P +L V +F + + PG Sbjct: 94 VITAALISVILGVPLGIWAAYSKSASRVIIPVLDFMQTMPAFVYLLPAVTFFSLGVVPGV 153 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + + IFAI T + + + + +L E + +F + QK + + +P +M Sbjct: 154 IA----SVIFAI------PPTIRLTRLGINQVSGELTEAADAFGSTSGQKLFKVQLPLAM 203 Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 P G+ +M+S+S M+V+ ++I GIG+ + A+ + Sbjct: 204 PTLMAGINQTIMLSLS----------MVVIA-SMIGAQGIGAEVYRAVTQ 242 >gi|126735115|ref|ZP_01750861.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Roseobacter sp. CCS2] gi|126715670|gb|EBA12535.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Roseobacter sp. CCS2] Length = 277 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 25/193 (12%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +LS+ V+ + A R + P+LD+MQ++P +L +V+F + + PG Sbjct: 100 VLSSCVVCMGLGVPIGIFLAHRPRAYQAVSPVLDLMQTLPAFVYLIPAIVFFGLGMVPG- 158 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +FA + Y + N P L E + +F + Q+ W + +P+++P Sbjct: 159 --------LFATVIFVLPAPIRLTYLGVSNTPTSLLEAAEAFGATPAQRLWKVELPYAVP 210 Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 GL +M+S+S +VV + G+G + A+ D + L Sbjct: 211 QIMAGLNQVIMLSLS-----------MVVISAYVGANGLGKPVVQALGRNDPGLGFESGL 259 Query: 247 TMLGVIFLYDQLL 259 ++ V + D++L Sbjct: 260 VIVAVAIMLDRML 272 >gi|71083501|ref|YP_266220.1| glycine betaine/L-proline transport system permease protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062614|gb|AAZ21617.1| Glycine betaine/L-proline transport system permease protein [Candidatus Pelagibacter ubique HTCC1062] Length = 501 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 12/192 (6%) Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 W+ +T ++ + SI I IP+GI+ R S I+P + PA VF ++ Sbjct: 313 WVKAMTTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVF---MIP 369 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++++ + + MIFG + V+ G P +E A ++ T W R + L Sbjct: 370 VIAFFGTGKVAAVIITMIFGGTPVVRLTVL-GLRGVPETIREAAIAYGATKWYLLRKVDL 428 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P + G + +V+ + + GLG + E+ + + + +L Sbjct: 429 PLATPSILAGVNQTVMLSLAMVVVASL-------IGAKGLGQDVLEALQYANVGQGILAG 481 Query: 560 LIMCCFVLALNR 571 + + L L+R Sbjct: 482 IAILFVALILDR 493 Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 16/193 (8%) Query: 68 TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL +L +A V+S+ A+ +R ++ PI+D MQ++P F+ + +F Sbjct: 318 TTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVFMIPVIAFFGT- 376 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV + IF + V +T L +P + E + ++ + W + +P Sbjct: 377 --GKVAAVIITMIFG--GTPVVRLT---VLGLRGVPETIREAAIAYGATKWYLLRKVDLP 429 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 + P ++ + + V+ S +VV ++I G+G + A++ ++ + A + Sbjct: 430 LATPSILAGVNQT-------VMLSLAMVVVASLIGAKGLGQDVLEALQYANVGQGILAGI 482 Query: 247 TMLGVIFLYDQLL 259 +L V + D+++ Sbjct: 483 AILFVALILDRVV 495 >gi|310818711|ref|YP_003951069.1| ABC-type proline/glycine betaine transport system, periplasmic component [Stigmatella aurantiaca DW4/3-1] gi|309391783|gb|ADO69242.1| ABC-type proline/glycine betaine transport system, periplasmic component [Stigmatella aurantiaca DW4/3-1] Length = 595 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + +L A +SLL +AA+ R VL +LD+MQ+IP +L T++ Sbjct: 404 QPTMETLVLVLVATALSLLLGVPLGIVAARRPRFYAVLRLLLDLMQTIPTFVYLIPTLML 463 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG L+ + + + + +T Y + ++P+++ E +F Q Sbjct: 464 FGLGVVPGL-----LSTVVFVLPAPI-RLT---YLGITSVPKEMIEAGEAFGARPLQLLV 514 Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P++ + G+ +M+S+S VV + ++ G G+GS + A+ D Sbjct: 515 KIELPYARKAILEGVTQALMLSLS----MVVIAALVGAG-------GLGSRVVRALNTVD 563 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + L D++ P Sbjct: 564 IRQGFEAGLVIVILAILLDRMFKHP 588 >gi|300855828|ref|YP_003780812.1| putative ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300435943|gb|ADK15710.1| predicted ABC transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 250 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 5/143 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ I+++ I I G+ G I ++P + + P V ++++ V + Sbjct: 64 SILRVIIGILLSIAIGIITGVIAGMNKSIEELLEPLVVTVKSTP--VISIIIIALVWFNS 121 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N ++ ++L+ F I NVI G + ++AS +++ + I LP I Y Sbjct: 122 SNVVIFTAILICFPI---IYTNVIEGIKSVDKYLIQMASVYNVKQKYVIKDIYLPSIKNY 178 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 ++G G W S+ SEV S Sbjct: 179 IISGIFMCLGIGWKVSVASEVLS 201 >gi|227329900|ref|ZP_03833924.1| glycine betaine transporter membrane protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 415 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R + P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 231 ARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 285 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 286 TI---LGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 338 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 339 VVIASMIAVG-------GLGQMVLRGIGRLDM 363 >gi|91762081|ref|ZP_01264046.1| Glycine betaine/L-proline transport system permease protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717883|gb|EAS84533.1| Glycine betaine/L-proline transport system permease protein [Candidatus Pelagibacter ubique HTCC1002] Length = 501 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 12/192 (6%) Query: 381 WLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 W+ +T ++ + SI I IP+GI+ R S I+P + PA VF ++ Sbjct: 313 WVKAMTTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVF---MIP 369 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++++ + + MIFG + V+ G P +E A ++ T W R + L Sbjct: 370 VIAFFGTGKVAAVIITMIFGGTPVVRLTVL-GLRGVPETIREAAIAYGATKWYLLRKVDL 428 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P + G + +V+ + + GLG + E+ + + + +L Sbjct: 429 PLATPSILAGVNQTVMLSLAMVVVASL-------IGAKGLGQDVLEALQYANVGQGILAG 481 Query: 560 LIMCCFVLALNR 571 + + L L+R Sbjct: 482 IAILFVALILDR 493 Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 16/193 (8%) Query: 68 TTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL +L +A V+S+ A+ +R ++ PI+D MQ++P F+ + +F Sbjct: 318 TTLALLGTAAVLSIAIGIPLGIFCARRQRFYSLIRPIMDFMQTMPAFVFMIPVIAFFGT- 376 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV + IF + V +T L +P + E + ++ + W + +P Sbjct: 377 --GKVAAVIITMIFG--GTPVVRLT---VLGLRGVPETIREAAIAYGATKWYLLRKVDLP 429 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 + P ++ + + V+ S +VV ++I G+G + A++ ++ + A + Sbjct: 430 LATPSILAGVNQT-------VMLSLAMVVVASLIGAKGLGQDVLEALQYANVGQGILAGI 482 Query: 247 TMLGVIFLYDQLL 259 +L V + D+++ Sbjct: 483 AILFVALILDRVV 495 >gi|237736477|ref|ZP_04566958.1| binding-protein-dependent transport system inner membrane component [Fusobacterium mortiferum ATCC 9817] gi|229421519|gb|EEO36566.1| binding-protein-dependent transport system inner membrane component [Fusobacterium mortiferum ATCC 9817] Length = 253 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 10/177 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RV++ I+ +P+GI G +P + + + + P P+++ Sbjct: 54 AISLRRVIIGFGISIFFALPLGIVFGIKPKLYEYFKNLLEFMRHVPPLALVPMIILWFGI 113 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ +++I + + I N + G + + EV F++T ++ IILP Sbjct: 114 GELSK----IVIIILASFFPIFLNSLKGIVSCDEKYIEVGKVFNLTHMEIFKKIILPSAI 169 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P + G G +W A I +E+ + ++G+G I ++ + VV+G+L Sbjct: 170 PDILLGLKLGLGYSWRAIIAAELIA------SSSGIGYLILDAQQISRSDIVVVGIL 220 >gi|146276813|ref|YP_001166972.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145555054|gb|ABP69667.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 412 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 15/160 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F GKVI +F + +W M + + ++ Sbjct: 255 PIVEFMRPVPPLALIPLVIIWFGIGEVGKVI--------LLFLASLWIMAIAARSGVTSV 306 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S Q W++ VP S+P L ++M W VVA+E++ Sbjct: 307 RLAKVHAAYSLGASRPQLLWHVIVPHSLPDLFTGARVAMGVCWGTVVAAELVAAEK---- 362 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G G I A K Q +L ++ ++G+I +L R Sbjct: 363 --GAGMMIIAASKFQQTDVVLMGVI-LIGLIGYGIDILMR 399 >gi|325003251|ref|ZP_08124363.1| sulfonate/nitrate/taurine ABC transporter permease [Pseudonocardia sp. P1] Length = 279 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 10/131 (7%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P Q+L P PL + L P + LL+ G + + NV AG Sbjct: 114 VDPPVQMLRTLPHLGLVPLFILWFGIGEL-PKV---LLVALGVLFPMYLNVHAGVRGVDP 169 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 E AS T R+++LPG P +TG A G AW + IV+E S Sbjct: 170 KLLEAASVSGFTRAERLRHVVLPGAMPSTLTGLRLALGIAWLSIIVAETTSA------DA 223 Query: 538 GLGAYIAESTE 548 GLG I + E Sbjct: 224 GLGYMIMNARE 234 >gi|237802225|ref|ZP_04590686.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025082|gb|EGI05138.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 265 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 21/153 (13%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLG 250 GIG Y+A+ +E D++ +LYA+L L Sbjct: 208 GIG-YLAMNAREFLQTDIVVLAIVLYAVLGKLA 239 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDIVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|325290914|ref|YP_004267095.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324966315|gb|ADY57094.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 258 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 54/151 (35%), Gaps = 26/151 (17%) Query: 420 PFAQLLAAF---PANVFFPLVVSCVSYYHLNPNLWLSLLMIF--------------GTQW 462 P LL F V P + +C LNP + + MIF T W Sbjct: 80 PLGFLLGTFFKSTEKVLLPFMRAC---EKLNPFAIIPIFMIFFGIGTAEKVVVIFWSTLW 136 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 +LFN +AGA + + S T W R +I P P G A A+ I Sbjct: 137 PVLFNTMAGARNIDQNLLRMVRSMGATRWELLRKVIFPYTLPNIFIGIEFAAQVAFFMII 196 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 SEV +TGLG Y S K P Sbjct: 197 ASEVIG------ASTGLGWYYTSSATKYDLP 221 >gi|296332656|ref|ZP_06875116.1| glycine betaine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673000|ref|YP_003864672.1| glycine betaine ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296149936|gb|EFG90825.1| glycine betaine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411244|gb|ADM36363.1| glycine betaine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 282 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 85/169 (50%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T +L++++IS++ A++ + ++ PILD+MQ++P +L ++F N+ Sbjct: 92 QTLALVLTSVIISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ MT + +P DL E + +F + Q+ + + +P Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTAQRLFKVQLP 203 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + ++ + S+ ++A M+V+ ++ PG+GS + A+ + Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245 >gi|290956488|ref|YP_003487670.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260646014|emb|CBG69105.1| putative transport system integral membrane protein [Streptomyces scabiei 87.22] Length = 300 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P L + P+ + P + V + L P++ +++++ G I +++G P Sbjct: 133 IGPILSGLQSLPSVAWVP---AAVVWLGLEPSVMYTVILL-GAVPSIANGLVSGIDQVPP 188 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRT 536 F + TG + +I++P P YV G +W + + +E +A I Sbjct: 189 LFLRAGRTLGATGLKGTWHIVMPAALPGYVAGLKQGWAFSWRSLMAAEIIAKAPDIG--- 245 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 +GLG + S P+V L + ++ +A++ L+ PL Sbjct: 246 SGLGQMLEAGRTNSSMPQVFLAIFLILIVGIAIDLLLFSPL 286 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 16/207 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 SR L L+A+ I + A + +G PIL +QS+P + ++ VV+ Sbjct: 103 SRGLLGFLAALAIGTPLGLLVARVRVVRAAIG----PILSGLQSLPSVAWVPAAVVW--- 155 Query: 126 LYPGKVIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 +G E + ++ I V ++ + + +P R+ +G + W++ Sbjct: 156 ------LGLEPSVMYTVILLGAVPSIANGLVSGIDQVPPLFLRAGRTLGATGLKGTWHIV 209 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++PG V + + W ++A+E+I + G+G + + + A Sbjct: 210 MPAALPGYVAGLKQGWAFSWRSLMAAEIIAKAPDIG--SGLGQMLEAGRTNSSMPQVFLA 267 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + +L V D LLF P+ W + R Sbjct: 268 IFLILIVGIAIDLLLFSPLERWVLRSR 294 >gi|256061630|ref|ZP_05451769.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella neotomae 5K33] gi|261325637|ref|ZP_05964834.1| glycine betaine/L-proline ABC transporter permease [Brucella neotomae 5K33] gi|261301617|gb|EEY05114.1| glycine betaine/L-proline ABC transporter permease [Brucella neotomae 5K33] Length = 278 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 18/161 (11%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +LS+ + ++ AA L + P+LD+MQ++P +L +V+F + Sbjct: 95 KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG LA + + + + + + P L E +F S Q W + + Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205 Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 P++MP GL +M+S+S VV + ++ G +P+ Sbjct: 206 PYAMPQILAGLTQTIMLSLS----MVVIAALVGAGGLGVPV 242 >gi|253689683|ref|YP_003018873.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756261|gb|ACT14337.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 422 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R + P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 238 ARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 292 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P +MP G+ +M+++S Sbjct: 293 TI---LGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 345 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 346 VVIASMIAVG-------GLGQMVLRGIGRLDM 370 >gi|238794435|ref|ZP_04638045.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia intermedia ATCC 29909] gi|238726230|gb|EEQ17774.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia intermedia ATCC 29909] Length = 347 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 162 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 216 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 217 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 269 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 270 VVIASMIAVG-------GLGQMVLRGIGRLDM 294 >gi|221212109|ref|ZP_03585087.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD1] gi|221168194|gb|EEE00663.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD1] Length = 292 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 27/142 (19%), Positives = 67/142 (47%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + +L FV ++A +R +L + + +P + L +++F L G + Sbjct: 99 LLRGYALGVLLAFVLTSVAVSTRFGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGSL 157 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + F + + +W + +MY +P L R++ L+G ++ + VP ++P Sbjct: 158 L-------FVLVHAVLWPLALNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALPS 210 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 211 ILSGLRVGWAFAWRTLIAAELV 232 >gi|118469502|ref|YP_884960.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118170789|gb|ABK71685.1| ABC transporter, permease protein [Mycobacterium smegmatis str. MC2 155] Length = 242 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 11/126 (8%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L+A RRL P + ++++P L ++ +++F KV + A F I+T+ Sbjct: 77 LSATVRRL---FAPTVAALRTVPSLAWVPLLLLWFGIGETPKVTLVAIGAFFPIYTTTA- 132 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +L ++ L EV R++ G + +P + P LV + + ++ W F+V Sbjct: 133 -------SALSHVDAQLLEVGRAYGRRGAALVTTVMLPAAAPALVNGLRLGLANAWLFLV 185 Query: 209 ASEMIV 214 A+E+I Sbjct: 186 AAELIA 191 >gi|77459382|ref|YP_348889.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77383385|gb|ABA74898.1| putative transport system permease [Pseudomonas fluorescens Pf0-1] Length = 274 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 15/205 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D L Q+ S + R+ + + +L+ +S+ +L+P L++++ IP + ++ Sbjct: 69 DSGKLIQHLSASLGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWI 128 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F + +EL+ +F FT ++ + + + + L ++S Sbjct: 129 PLAILMFPS--------SELSMVFITFTGALFPILLNTVHGVEGVDPRLIASAKSLGAGR 180 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P + P ++ + + M WF +V +EMI G GIG Y + Q Sbjct: 181 RAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMI-SGQF-----GIGYYTWESYTIQ 234 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 + I+ ML ++GV+ + LL + Sbjct: 235 NYADIVVGML-LIGVLGMGSSLLIK 258 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 18/181 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + A +I I +G+ IG + P ++L PA + PL + Sbjct: 80 SLGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWIPLAIL------ 133 Query: 446 LNPNLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPG 501 + P+ LS++ I G + IL N + G D + +AS+ + R +ILPG Sbjct: 134 MFPSSELSMVFITFTGALFPILLNTVHGVEGV--DPRLIASAKSLGAGRRAILLEVILPG 191 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P +TG G +W + +E+ S G+G Y ES ++ ++V+G+L+ Sbjct: 192 AAPSIITGLAIGMGTSWFCLVTAEMIS------GQFGIGYYTWESYTIQNYADIVVGMLL 245 Query: 562 M 562 + Sbjct: 246 I 246 >gi|24379499|ref|NP_721454.1| putative ABC transporter, proline/glycine betaine permease protein [Streptococcus mutans UA159] gi|290580500|ref|YP_003484892.1| putative proline/glycine betaine ABC transporter permease [Streptococcus mutans NN2025] gi|24377438|gb|AAN58760.1|AE014944_10 putative ABC transporter, proline/glycine betaine permease protein [Streptococcus mutans UA159] gi|254997399|dbj|BAH88000.1| putative ABC transporter, proline/glycine betaine permease protein [Streptococcus mutans NN2025] Length = 576 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 120 AKNNTVKQIINPILDFMQTMPAFVYLIPAVAFF---GIGIVPGVFASVIFALPPTVRFTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + ++ IP +L E + +F + QK + + +P + M G+ +M+++S Sbjct: 177 L------AIREIPTELIEAADAFGSTSRQKLFKVELPLAKNTIMAGINQTIMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V G ++I PG+G + A++ D+ Sbjct: 227 ------MVVTG-SMIGAPGLGRGVLSALQHADI 252 >gi|330980660|gb|EGH78763.1| aliphatic sulfonates ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 265 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 23/177 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|295399916|ref|ZP_06809897.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] gi|312111562|ref|YP_003989878.1| binding-protein-dependent transporters inner membrane component [Geobacillus sp. Y4.1MC1] gi|294978319|gb|EFG53916.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] gi|311216663|gb|ADP75267.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. Y4.1MC1] Length = 265 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 28/185 (15%) Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQ 461 G+ I + P Q L P+ + PL + LW+ + L+ G Sbjct: 88 GYFRTIRYLLDPLIQALRNIPSLAWVPLFI-----------LWMGIGEASKISLIALGVF 136 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + + N+++G EV GWR R+ LP P ++ G + G W Sbjct: 137 FPVYLNLVSGIQGVDRRLLEVGWVHGYQGWRLIRHFFLPAALPSFIVGLRSGFGLGWMFV 196 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 + +E+ + GLG + + G P +++ +++ L +L L L G Sbjct: 197 VAAEIMG------ASKGLGFLLTDGQTTGR-PAIIIASILLFALFGKLTDYL---LELVG 246 Query: 582 TRCLR 586 R LR Sbjct: 247 RRILR 251 >gi|238750477|ref|ZP_04611978.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia rohdei ATCC 43380] gi|238711408|gb|EEQ03625.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia rohdei ATCC 43380] Length = 367 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 227 TI---LGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|87311267|ref|ZP_01093389.1| nitrate transport permease protein [Blastopirellula marina DSM 3645] gi|87286007|gb|EAQ77919.1| nitrate transport permease protein [Blastopirellula marina DSM 3645] Length = 519 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 14/162 (8%) Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 V V + A+ I IP+G+ G I + + P L V+ P+V V + P+ Sbjct: 315 VFVGFLFATAIAIPIGVLCGLNKVIMASLSPLISLFKPVSPIVWLPIVFIVVGGFIERPD 374 Query: 450 --------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 L ++ + + W L N G ++ D VA ++ W I++P Sbjct: 375 EAWVKPAFLSSAITVALCSLWPTLVNTALGVASIDKDHLNVARVLRLSMWDRLTKIVIPS 434 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 P TG + G W I +E+ S + GLG ++ Sbjct: 435 ALPLIFTGLRISLGVGWMVLIAAELLS------SSPGLGKFV 470 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/94 (21%), Positives = 46/94 (48%), Gaps = 6/94 (6%) Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 L++ + +W + + +I +D V+R RLS W + + +P ++P + Sbjct: 383 LSSAITVALCSLWPTLVNTALGVASIDKDHLNVARVLRLSMWDRLTKIVIPSALPLIFTG 442 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 + +S+ GW ++A+E++ PG+G ++ Sbjct: 443 LRISLGVGWMVLIAAELLSSS------PGLGKFV 470 >gi|330954780|gb|EGH55040.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae Cit 7] Length = 265 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 23/177 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ + Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVCLRWHPAYQVSK 261 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|331699700|ref|YP_004335939.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326954389|gb|AEA28086.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 325 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 25/122 (20%), Positives = 58/122 (47%), Gaps = 8/122 (6%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +SR + P++++ + IP + + ++ F +E +F F + + + Sbjct: 156 RSRVARAAIRPVIEVSRPIPAIALVPLAILLFPT--------SEQGIVFITFFAAFFPVA 207 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 S ++ ++P+ EE +R+ ++ +P +MPG+ + +SM W V+++E Sbjct: 208 VSTIHAMKSLPKVWEEAARTMGARRVAVLTHIVLPGAMPGIFSGLSVSMGVAWICVISAE 267 Query: 212 MI 213 MI Sbjct: 268 MI 269 >gi|160891878|ref|ZP_02072881.1| hypothetical protein BACUNI_04336 [Bacteroides uniformis ATCC 8492] gi|156858356|gb|EDO51787.1| hypothetical protein BACUNI_04336 [Bacteroides uniformis ATCC 8492] Length = 394 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 11/185 (5%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIF 140 +Y + A SR + L PI++++ IP + GF V+ + ++ V + LA Sbjct: 198 IYMSEVANSRVRNL-LKPIIELLSGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLAGSI 256 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 + + + ++ N PR + E S + S WQ + + +P+S+ G+ +++ + Sbjct: 257 VLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGI 316 Query: 201 SGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 +A M+ VI PL I + IA + E Y L +LGV+ Sbjct: 317 GRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLF 376 Query: 255 YDQLL 259 + LL Sbjct: 377 FISLL 381 >gi|161520035|ref|YP_001583462.1| choline ABC transporter, permease protein [Burkholderia multivorans ATCC 17616] gi|189353784|ref|YP_001949411.1| glycine betaine/proline transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160344085|gb|ABX17170.1| choline ABC transporter, permease protein [Burkholderia multivorans ATCC 17616] gi|189337806|dbj|BAG46875.1| glycine betaine/proline transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 298 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL AAKS+ + ++ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLALGIPLGIWAAKSKWVAAIVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ + + ++ R++ E ++F + WQ + + P ++P Sbjct: 153 GILSTVIFAMPPAVRLT-----SLGIRHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|320546803|ref|ZP_08041111.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus equinus ATCC 9812] gi|320448549|gb|EFW89284.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus equinus ATCC 9812] Length = 316 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +L P ++++ IP + GF+ V+ F L G L+ + +F + +TF Sbjct: 129 ILQPAIELLTGIPSVVYGFIGLQVIVPFTRLIFGGTGFGILSGVCVLFVMILPTVTFMTI 188 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 SL +PR +E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 189 DSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVVG 248 Query: 216 GDTVIP 221 V+P Sbjct: 249 NSAVVP 254 >gi|242238740|ref|YP_002986921.1| binding-protein-dependent transporters inner membrane component [Dickeya dadantii Ech703] gi|242130797|gb|ACS85099.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech703] Length = 288 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 18/80 (22%), Positives = 41/80 (51%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E + IF + S +W M + Y +P L R++ L+GW+ + +P ++P ++ Sbjct: 149 GEKSLIFVLVHSVMWPMALNAYSGFLGVPETLRMAGRNYGLTGWRYVSQILIPAALPAII 208 Query: 194 WNMMMSMSGGWFFVVASEMI 213 + + + W ++A+E++ Sbjct: 209 SGLKIGWAFAWRTLIAAELV 228 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 16/129 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ W + N +G P + ++ +TGWR+ I++P P ++G Sbjct: 156 VLVHSVMWPMALNAYSGFLGVPETLRMAGRNYGLTGWRYVSQILIPAALPAIISGLKIGW 215 Query: 515 GGAWNASIVSEV---ASWGHIHLRTTGLGAYIAESTEK--------GSFPEVVLGVLIMC 563 AW I +E+ AS G GLG YI ++ + G +++G+L+ Sbjct: 216 AFAWRTLIAAELVFGASSGK-----GGLGWYIFQNRNELYTDRVFAGLASVILIGLLVEG 270 Query: 564 CFVLALNRF 572 F L R Sbjct: 271 LFFSTLERL 279 >gi|227872518|ref|ZP_03990856.1| ABC superfamily ATP binding cassette transporter permease [Oribacterium sinus F0268] gi|227841637|gb|EEJ51929.1| ABC superfamily ATP binding cassette transporter permease [Oribacterium sinus F0268] Length = 246 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 32/60 (53%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N++ G + E+A FH + +R RYI LP ++P + A A G +W + I +E+ Sbjct: 132 NLLEGFHKTDHKLLEMAEVFHFSLYRRLRYIHLPAVYPLLLGAAKLAMGLSWKSGIAAEL 191 >gi|325927457|ref|ZP_08188701.1| periplasmic glycine betaine/choline-binding lipoprotein [Xanthomonas perforans 91-118] gi|325542158|gb|EGD13656.1| periplasmic glycine betaine/choline-binding lipoprotein [Xanthomonas perforans 91-118] Length = 406 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG V++ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 323 RLGQVVLSLTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 374 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + L +IPR+L + + + L W + W + +P Sbjct: 375 HAGLTSIPRELRQTAHAIGLPAWTRLWRVELP 406 >gi|163737565|ref|ZP_02144982.1| glycine betaine transporter, permease protein [Phaeobacter gallaeciensis BS107] gi|161389091|gb|EDQ13443.1| glycine betaine transporter, permease protein [Phaeobacter gallaeciensis BS107] Length = 342 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 35/165 (21%), Positives = 81/165 (49%), Gaps = 22/165 (13%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 IS+LF +KS RL +VP+LD++Q++P +L +++ ++ K+ G + Sbjct: 161 ISVLFGVPIGIAMSKSDRLQKSVVPLLDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAII 219 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLV 193 + ++ ++ + + +D+ E + +F ++ QK + +P ++P G+ Sbjct: 220 LYAIVPVIRLTDLGIRL------VDQDVIEAANAFGMNDRQKLMRVQLPLALPNIMAGIN 273 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +MMS++ M+V+ +++ PG+G + I+ +L Sbjct: 274 QTIMMSLA----------MVVIA-SLVSAPGLGVNVLRGIRNLEL 307 >gi|115373306|ref|ZP_01460606.1| ABC transproter, fused inner membrane component and substrate-binding domain [Stigmatella aurantiaca DW4/3-1] gi|115369752|gb|EAU68687.1| ABC transproter, fused inner membrane component and substrate-binding domain [Stigmatella aurantiaca DW4/3-1] Length = 482 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 10/126 (7%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV-VYFMNLYPGKVIG 133 ++V S+L LAA+ RLG +++ + I+Q++P L L F + + + P Sbjct: 287 SLVASVLVAVPLGVLAARRARLGRLVLGLASIIQTVPSLALLVFMIPLLGIGTRP----- 341 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AI A+F + + + L I DL E + + L + W + +P + P L+ Sbjct: 342 ----AIMALFLYGLLPIVRNTAAGLSGIAGDLRESAEALGLPPRARLWRIELPLAAPSLL 397 Query: 194 WNMMMS 199 + + Sbjct: 398 AGIQTA 403 >gi|70733048|ref|YP_262821.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68347347|gb|AAY94953.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 287 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ +L +AA ++ P+LD+MQ++P +L T+ Sbjct: 95 QETMETLAQVLFATLVCVLIGVPLGIVAAHKPLFYTMMRPVLDLMQTVPTFVYLIPTLTL 154 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 155 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELMDAGKAFGCSRRQLLS 205 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 206 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 254 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 255 IALGFEAGLAIVLLAIMLDRICKQP 279 >gi|325264227|ref|ZP_08130959.1| taurine ABC transporter, permease protein [Clostridium sp. D5] gi|324030711|gb|EGB91994.1| taurine ABC transporter, permease protein [Clostridium sp. D5] Length = 263 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 69/143 (48%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L +++ L L + R + + P ++++ IP + +++ +++F Sbjct: 74 RVLVGYILACLLGITLGLLMGRFRLMEAIFNPFYEMIRPIPPIAWISLAILWFG------ 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E F IF + +T ++Y+ + ++L ++ + Q FW + +P ++P Sbjct: 128 -IG-ESMTYFIIFLATFNVLTINVYRGTKALNQELAGCAKMLGANETQVFWTVVLPATVP 185 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + M + +S W VVA+EM+ Sbjct: 186 YIFAGMQIGLSTSWAAVVAAEMV 208 >gi|260425684|ref|ZP_05779664.1| taurine ABC transporter, permease protein [Citreicella sp. SE45] gi|260423624|gb|EEX16874.1| taurine ABC transporter, permease protein [Citreicella sp. SE45] Length = 421 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV+ ++I IP+G +G P + + P PLV+ Sbjct: 230 SLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L +L+ W + +G S A S + W+ R++I+P P Sbjct: 290 LGK----IILLFLAALWIMAIAARSGVSGVSISKVHAAYSLGASKWQIMRHVIVPNSLPD 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++ IG EL I +F + +W M + + + Sbjct: 264 PIVEFMRPVPPLALIPLVIIW-------AGIG-ELGKIILLFLAALWIMAIAARSGVSGV 315 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ ++ VP S+P + ++M W VVA+E++ Sbjct: 316 SISKVHAAYSLGASKWQIMRHVIVPNSLPDIFTGARVAMGVCWGTVVAAELVAAEK---- 371 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G G I +A K Q L I+ + ++GVI +L R Sbjct: 372 --GAGMMIMVASKFQ-LTDIVIMGIILIGVIGFGIDILMR 408 >gi|296128155|ref|YP_003635405.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas flavigena DSM 20109] gi|296019970|gb|ADG73206.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas flavigena DSM 20109] Length = 286 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 22/178 (12%) Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV----------WNMTFSMYQSLC 159 +P L T T V F+ P I LA + A + + W + + + Sbjct: 114 VPFLRRATHTTVEFLRPIPSVAI-IPLAVLLAGLSREAALVIVVYAPFWQVFVQVLYGVG 172 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 ++ ++ +RSF L WQ+ ++ +P ++P ++ ++ S + +E+ V+G+ Sbjct: 173 DVDTVADDTARSFGLGRWQRLRHVVLPTALPYVITGFRLAASIALVLTITAEL-VIGN-- 229 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLG----VIFLYDQLLFRPMIVWSNKFRLE 273 PGIG I + D LYA++ + G ++ L +L+ R ++ W R E Sbjct: 230 ---PGIGRQIDVYRSNADAPG-LYALVLVTGGLGLLVNLATRLVERRVLHWHPSVRKE 283 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 15/132 (11%) Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 +++++ W + V+ G + A SF + W+ R+++LP PY +TG A Sbjct: 153 VIVVYAPFWQVFVQVLYGVGDVDTVADDTARSFGLGRWQRLRHVVLPTALPYVITGFRLA 212 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLG----AYIAESTEKGSFPEVV----LGVLIMCCF 565 A +I +E+ + G+G Y + + G + V+ LG+L+ Sbjct: 213 ASIALVLTITAELV------IGNPGIGRQIDVYRSNADAPGLYALVLVTGGLGLLVNLAT 266 Query: 566 VLALNRFL-WHP 576 L R L WHP Sbjct: 267 RLVERRVLHWHP 278 >gi|163852761|ref|YP_001640804.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|163664366|gb|ABY31733.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] Length = 291 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +LP + + R+LS + +L +SR +L+P L++++ IP + ++ Sbjct: 89 ALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLA 148 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F + +E++ F FT ++ + + + ++ L +RS Sbjct: 149 ILMFPS--------SEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAI 200 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P + P +V + M WF +V +EMI Sbjct: 201 LREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMI 234 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + A + + +G+ IG + P ++L PA + PL + Sbjct: 97 SLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFPSSE 156 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ ++ + G + IL N + G + A S R +ILPG P Sbjct: 157 VS----MAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPS 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 VTGA G AW + +E+ S + G+G + ES ++ ++V+G+L++ Sbjct: 213 IVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLI 263 >gi|114567251|ref|YP_754405.1| binding-protein-dependent transport systems inner membrane component [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338186|gb|ABI69034.1| binding-protein-dependent transport systems inner membrane component [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 283 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 15/164 (9%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 +++ISLL A S R ++ PILD MQ++P +L ++ F GKV G Sbjct: 102 SVIISLLLGIPLGIAMAVSDRCNTMVTPILDAMQTMPSFVYLIPALMLF---GLGKVPGV 158 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 I+A+ V +T + +P ++E + +F + WQ + +P +MP ++ Sbjct: 159 VATVIYAL--PPVVRLT---NLGIRQVPSSVQEAALAFGATSWQLMKEVRIPLAMPSILA 213 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + VV + MI G G+G + + D+ Sbjct: 214 GINQTTMMALAMVVIASMIGAG-------GMGEVVLICTNRIDV 250 >gi|307729503|ref|YP_003906727.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] gi|307584038|gb|ADN57436.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] Length = 288 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 33/175 (18%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAF 475 Q++ PA PLV+ LW + L+ G + + N G + Sbjct: 128 QMIRNIPALAMIPLVI-----------LWFGIEEQAKVFLVALGVFFPLYVNTFHGIRSV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E+A S+ + G +R++ILPG P + G A G W IV+E S Sbjct: 177 DPNLIEMARSYGVKGLALYRHVILPGALPSILVGVRFALGLMWVTLIVAETIS------A 230 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYG 581 +G+G + E VV+G+L+ VLA L R WHP Y G Sbjct: 231 QSGIGYMTMNAREFLQTDVVVVGILLYAALGKIADVLAKSLERVSLRWHPAYQRG 285 >gi|255066447|ref|ZP_05318302.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Neisseria sicca ATCC 29256] gi|255049327|gb|EET44791.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Neisseria sicca ATCC 29256] Length = 509 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 12/131 (9%) Query: 67 RTTLRMLSAMVISLLFTFVYAT-LA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + TL L +I+LL A LA A RR ++ I +I+Q+IP L L + + Sbjct: 14 QATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQITNILQTIPSLALLGLLIPF 73 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 P +I L A+ IF + Y L I ++E +F LS WQ W Sbjct: 74 VGIGSPPVLIALTLYALLPIFQN--------TYLGLSQIDPAIKEAHTAFGLSRWQALWR 125 Query: 183 LGVPFSMPGLV 193 + +P ++P ++ Sbjct: 126 IELPMALPAMI 136 >gi|222081719|ref|YP_002541084.1| glycine betaine/L-proline ABC transporter [Agrobacterium radiobacter K84] gi|221726398|gb|ACM29487.1| glycine betaine/L-proline ABC transporter [Agrobacterium radiobacter K84] Length = 283 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 8/119 (6%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++IS++ F LA+++R + ++ PILDIMQ++P +L V+ F G+V Sbjct: 101 AVLISVVIAFPLGILASRNRSIEALIRPILDIMQTVPPWVYLIPAVMIFSL---GRV--- 154 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AI A V M + +P DL+E+ ++ S + +P + P LV Sbjct: 155 --PAIIATIVYGVPPMLRLTTLAFRQVPNDLKELGQAIGASPTSILLKIEIPSAKPTLV 211 >gi|171779497|ref|ZP_02920461.1| hypothetical protein STRINF_01342 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282114|gb|EDT47545.1| hypothetical protein STRINF_01342 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 305 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 118 ILQPAIELLTGIPSVVYGFIGLQVIVPFTRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 176 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR +E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 177 IDSLKAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVV 236 Query: 215 VGDTVIP 221 V+P Sbjct: 237 GNSAVVP 243 >gi|110634883|ref|YP_675091.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium sp. BNC1] gi|110285867|gb|ABG63926.1| binding-protein-dependent transport systems inner membrane component [Chelativorans sp. BNC1] Length = 300 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +IS L L AK R + +L+P+LDIMQ++P +L ++ F Sbjct: 113 QTLALMLMATLISCLVGIPTGVLVAKVRVMRNILIPMLDIMQTMPSFVYLIPAIMLF--- 169 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV A+ A V + + + +++ E + +F S Q + + +P Sbjct: 170 GLGKV-----PAVLATIIYGVPPLIRLTSLGIRQVDQEVVEAALAFGSSSRQILFGVELP 224 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P GL +MMS+S VV S MI Sbjct: 225 LAVPTILAGLNQTIMMSLS----MVVVSSMI 251 >gi|86145795|ref|ZP_01064124.1| ABC transporter permease protein [Vibrio sp. MED222] gi|85836494|gb|EAQ54623.1| ABC transporter permease protein [Vibrio sp. MED222] Length = 271 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 113 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 162 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ Y+ +P ++P L + +++ V+A VVG+ Sbjct: 163 LRNTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAV------VIAPIGAVVGE 216 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W N+ Sbjct: 217 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWENQ 271 >gi|218130137|ref|ZP_03458941.1| hypothetical protein BACEGG_01724 [Bacteroides eggerthii DSM 20697] gi|317476630|ref|ZP_07935875.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA] gi|217987641|gb|EEC53969.1| hypothetical protein BACEGG_01724 [Bacteroides eggerthii DSM 20697] gi|316907226|gb|EFV28935.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA] Length = 395 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 12/197 (6%) Query: 75 AMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYP 128 A++I+L F A ++ + ++ ++ PI++++ IP + GF V+ + ++ Sbjct: 185 AILIALPFGLAVAVYMSEVANHKIRNLMKPIIELLSGIPSVVYGFFGLIVIVPFLQKVFD 244 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 V + LA + + + ++ N PR + E S + S WQ + + +P+S Sbjct: 245 LPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYS 304 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAIL 242 + G+ +++ + +A M+ VI PL I + IA + E Sbjct: 305 ISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGAH 364 Query: 243 YAMLTMLGVIFLYDQLL 259 Y L +LGV+ + LL Sbjct: 365 YEALFLLGVVLFFISLL 381 >gi|157738204|ref|YP_001490888.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] gi|157700058|gb|ABV68218.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] Length = 260 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 6/114 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I + G D K++A SFH+ + LP IF Y I+A G +W ++ Sbjct: 144 IFVGALQGTRTIEGDLKQMADSFHLPFKMKIFDLYLPHIFSYIFPAYISALGMSWKIVVM 203 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 +E+ S + G+GA +A + + P + V+IM +L + ++ P+ Sbjct: 204 AELLS------SSNGIGASLAIARSQLDTPVALALVVIMIGSLLFIEYLIFEPI 251 >gi|254252483|ref|ZP_04945801.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] gi|124895092|gb|EAY68972.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] Length = 270 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWLERVTLRWHPAYQSGANA 270 >gi|167041923|gb|ABZ06662.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_133I24] Length = 295 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L +KS R ++P+LD+MQ+IP +L V M L GKV G I+A Sbjct: 122 GVLMSKSDRAEKTILPVLDMMQTIPSFVYL---VPILMLLGIGKVPGLIAVCIYA--APP 176 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 + +T + + ++ E +F + WQ+ + +P ++P G+ +MM+++ Sbjct: 177 IIRLT---NLGIREVDKETLEAIDAFGATTWQRLTKVQIPLALPTIFAGVNQTIMMALA- 232 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M+V+ ++I + G+G I AI Q L L L ++ + ++D++ Sbjct: 233 ---------MVVIA-SMIGVKGLGVPILRAISNQYLALGLMNGLAIVALAIIFDRV 278 >gi|163737851|ref|ZP_02145268.1| glycine betaine transporter, permease protein [Phaeobacter gallaeciensis BS107] gi|161389377|gb|EDQ13729.1| glycine betaine transporter, permease protein [Phaeobacter gallaeciensis BS107] Length = 318 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 32/165 (19%), Positives = 84/165 (50%), Gaps = 22/165 (13%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +S+LF + ++S R+ +++PILD++Q++P +L +++ ++ K+ G + Sbjct: 137 LSVLFGVPVGIMMSRSDRMQKIMLPILDMLQTLPSFVYL-IPLIFLFSVTEPKLYGIAII 195 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLV 193 + ++ ++ + + +D+ E + +F ++ QK + + +P ++P G+ Sbjct: 196 LYAIVPVIRLTDLGIRL------VDKDVVEAADAFGMTDRQKLYGVQLPLALPNIMAGVN 249 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +MMS++ M+V+ +++ PG+G + I+ +L Sbjct: 250 QTIMMSLA----------MVVIA-SLVSAPGLGVLVLRGIRNLEL 283 >gi|50123330|ref|YP_052497.1| putative aliphatic sulfonates transport permease [Pectobacterium atrosepticum SCRI1043] gi|49613856|emb|CAG77308.1| putative aliphatic sulfonates transport permease protein [Pectobacterium atrosepticum SCRI1043] Length = 264 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 13/121 (10%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A IF + ++ + + Y + NI R L E++RS+ LSG F+ + +P ++P ++ Sbjct: 124 EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGISLFYQVVLPGALPSIMV 183 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248 + ++ W ++V +T+ GIG Y+A+ +E D++ ILYA+L Sbjct: 184 GIRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGK 236 Query: 249 L 249 L Sbjct: 237 L 237 >gi|315635363|ref|ZP_07890630.1| sulfonate ABC superfamily ATP binding cassette transporter, membrane protein [Arcobacter butzleri JV22] gi|315480348|gb|EFU71014.1| sulfonate ABC superfamily ATP binding cassette transporter, membrane protein [Arcobacter butzleri JV22] Length = 261 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/165 (20%), Positives = 81/165 (49%), Gaps = 15/165 (9%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L ++I F+ + S+ +L + ++++IP+L + +++F Sbjct: 71 RALLGLIIGGSIGFILGFITGLSKLAENLLDSTIQMIRTIPLLALVPLVILWFG------ 124 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E + IF + + + + + + L ++ +DL E+ + + L+ ++ F + +P +MP Sbjct: 125 -IG-EFSKIFLLALAVFFPIYLNTFHGLRSVDKDLIEMGKVYGLNSYELFKNIILPGAMP 182 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 ++ + MS+ W +++ +E T+ GIG Y+ + +E Sbjct: 183 SILVGLRMSLGFMWLYLIVAE------TIASSEGIG-YMTMNARE 220 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 47/233 (20%), Positives = 86/233 (36%), Gaps = 31/233 (13%) Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 ++ G+ + G +++HF +++ R ++ +II I +G G Sbjct: 49 ISAGVTLTANGELIHHF------------LVSLQRALLGLIIGGSIGFILGFITGLSKLA 96 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 + + Q++ P PLV+ + L+L + F I N G + Sbjct: 97 ENLLDSTIQMIRTIPLLALVPLVILWFGIGEFSKIFLLALAVFFP----IYLNTFHGLRS 152 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 D E+ + + + ++ IILPG P + G + G W IV+E + Sbjct: 153 VDKDLIEMGKVYGLNSYELFKNIILPGAMPSILVGLRMSLGFMWLYLIVAETIA------ 206 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCF---------VLALNRFLWHPLY 578 + G+G + E +VLG+L+ VL WH Y Sbjct: 207 SSEGIGYMTMNAREFLQTDIMVLGILLYAVLGKISDILASVLEKRYLKWHKGY 259 >gi|302868051|ref|YP_003836688.1| binding-protein-dependent transport systems inner membrane component [Micromonospora aurantiaca ATCC 27029] gi|302570910|gb|ADL47112.1| binding-protein-dependent transport systems inner membrane component [Micromonospora aurantiaca ATCC 27029] Length = 278 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 6/116 (5%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ G + I FN AG E A + + R+++LPG P G A Sbjct: 149 LVALGAFFPIYFNTYAGIRDIDERLVEAARTCGLGAVARLRHVVLPGALPALFLGLRLAI 208 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW + +V E + TG+G + E+ E VVLG+LI LA + Sbjct: 209 GAAWLSLVVGEQVNA------QTGVGFLMMEAREFSQTDVVVLGLLIYALLGLASD 258 >gi|261819400|ref|YP_003257506.1| binding-protein-dependent transporters inner membrane component [Pectobacterium wasabiae WPP163] gi|261603413|gb|ACX85899.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium wasabiae WPP163] Length = 264 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 13/121 (10%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A IF + ++ + + Y + NI R L E++RS+ LSG F+ + +P ++P ++ Sbjct: 124 EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGISLFYQVVLPGALPSIMV 183 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248 + ++ W ++V +T+ GIG Y+A+ +E D++ ILYA+L Sbjct: 184 GIRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGK 236 Query: 249 L 249 L Sbjct: 237 L 237 >gi|222153813|ref|YP_002562990.1| glycine-betaine binding permease [Streptococcus uberis 0140J] gi|222114626|emb|CAR43642.1| putative glycine-betaine binding permease protein [Streptococcus uberis 0140J] Length = 575 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS + ++ PILD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 120 AKSSTVRHIINPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + I ++L E S +F + QK + +P + M G+ MM+++S Sbjct: 177 L------GIREISKELIEASDAFGSTPKQKLLKVELPLAKNTIMAGINQTMMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V G ++I PG+G + A++ D+ Sbjct: 227 ------MVVTG-SMIGAPGLGREVLSALQHADI 252 >gi|154149711|ref|YP_001403329.1| binding-protein-dependent transport systems inner membrane component [Candidatus Methanoregula boonei 6A8] gi|153998263|gb|ABS54686.1| binding-protein-dependent transport systems inner membrane component [Methanoregula boonei 6A8] Length = 310 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 12/158 (7%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GT 460 IP+G+++G++ + P A+ ++ P + P + + + + S+ +IF G Sbjct: 136 IPIGLYLGWKKRLFDVAYPIAKAVSPIPPTAYLPYTIVLLPTFATS-----SIFLIFIGA 190 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 W IL + G + A + ++ R ++ PG P +GA A ++ Sbjct: 191 FWPILVGSVYGVFSIDRRLINSAKTLGLSERDILRKVLFPGALPSIFSGAFIALIMSFIT 250 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 V+E+ + T+GLG YI + + ++ +V+ G Sbjct: 251 LTVAEMIA------ATSGLGWYIQYNHDFANYDKVIAG 282 >gi|299530863|ref|ZP_07044277.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni S44] gi|298721084|gb|EFI62027.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni S44] Length = 290 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 12/170 (7%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GT 460 IP+G IG P + PF Q+L PL ++ Y + + + +IF + Sbjct: 118 IPLGFLIGMSPLAYRALDPFIQVLKPIS-----PLAWMPIALYTIKDSSISGIFVIFICS 172 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 W +L N G + ++ VA++ + R +ILP P +TG + G AW Sbjct: 173 IWPMLTNTAFGVAGVRREWLNVANTLQVRPMRKAIEVILPAAAPTILTGMRISMGIAWLV 232 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ G TG+G ++ S V+ +L++ +AL+ Sbjct: 233 IVAAEMLVGG------TGIGYFVWNEWNNLSLANVIFAILVIGLVGMALD 276 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 7/127 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + ++ IF IF +W M + + + R+ V+ + ++ +K + +P + P ++ Sbjct: 160 SSISGIFVIFICSIWPMLTNTAFGVAGVRREWLNVANTLQVRPMRKAIEVILPAAAPTIL 219 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 M +SM W +VA+EM+V G GIG ++ L +++A+L ++G++ Sbjct: 220 TGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLANVIFAIL-VIGLVG 272 Query: 254 LYDQLLF 260 + +LF Sbjct: 273 MALDMLF 279 >gi|186471961|ref|YP_001863279.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184198270|gb|ACC76233.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 285 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 36/68 (52%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T S Q + N P +EV+R F S WQ+ ++ +P ++P L + ++ + W +V Sbjct: 165 VTLSTMQGVRNTPAPFDEVARVFGYSRWQRVIHIVLPAAVPTLATGVRLAFTKAWLALVV 224 Query: 210 SEMIVVGD 217 E++ + Sbjct: 225 VELVASSE 232 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + + + G P F EVA F + W+ +I+LP P TG A AW A +V Sbjct: 165 VTLSTMQGVRNTPAPFDEVARVFGYSRWQRVIHIVLPAAVPTLATGVRLAFTKAWLALVV 224 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 E+ + + GLG I + V+ V+I+ A+NR L Sbjct: 225 VELVA------SSEGLGYLIVYGRQLFQLDLVMASVVIVGAIGFAINRLL 268 >gi|266619678|ref|ZP_06112613.1| sugar ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288868776|gb|EFD01075.1| sugar ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 295 Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLS 175 V Y + L V+G+ A+ + S VW M + L +P DL+E + + Sbjct: 140 VNYLLGLGDYSVLGSPKTAMLGVIISAVWKQMPLMMIMLLSGLQTVPEDLKEAAEIDGAT 199 Query: 176 GWQKFWYLGVPFSMP 190 G QKFW + VP MP Sbjct: 200 GVQKFWCITVPCIMP 214 >gi|238796648|ref|ZP_04640154.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia mollaretii ATCC 43969] gi|238719379|gb|EEQ11189.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia mollaretii ATCC 43969] Length = 365 Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 180 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 234 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 235 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 287 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 288 VVIASMIAVG-------GLGQMVLRGIGRLDM 312 >gi|289672263|ref|ZP_06493153.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae FF5] gi|330939256|gb|EGH42657.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 265 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 21/153 (13%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLG 250 GIG Y+A+ +E D L +LYA+L L Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA 239 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|266622872|ref|ZP_06115807.1| taurine uptake ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288865367|gb|EFC97665.1| taurine uptake ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 261 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A IF IF + N T + N+ ++ +R Q F + +P S+P + Sbjct: 127 GEEAKIFLIFLAAFANTTLNAMTGAMNVDPEVVNAARMLGAKERQIFTTVIIPASVPAIF 186 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + + +S W VVA+EMI + G+G I + ++ IL A + M+GV+ Sbjct: 187 AGLQVGISSAWASVVAAEMIKAEN------GLGWIIQAGMDNNNMTQIL-AGIIMIGVV 238 >gi|261823527|ref|YP_003261633.1| binding-protein-dependent transporters inner membrane component [Pectobacterium wasabiae WPP163] gi|261607540|gb|ACX90026.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium wasabiae WPP163] Length = 536 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 99/213 (46%), Gaps = 21/213 (9%) Query: 50 DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109 D VP L +H LP R + + + L V +L +RRL + +P+ ++ Sbjct: 73 DFVPEEL-IHQLPISLMRLAIGFSGGIALGL----VLGSLFGLNRRLNALFMPLFTVIAQ 127 Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169 IP L ++ ++ IG L + + + V +T + P+ L E++ Sbjct: 128 IPTLAWIPLLMLSLG-------IGEALKLVVLVKSVTV-PVTLYTCAGIQQTPQKLHEMA 179 Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 RS RL YL +P +P ++ + ++ S GW ++A E++ + G+G Y+ Sbjct: 180 RSLRLPPIAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------GLG-YL 232 Query: 230 ALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261 + ++ +L +++ + ++G++ F +++L + Sbjct: 233 LVQSRQLFMLDLVFVCILIIGILGFSGERVLLK 265 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AG P E+A S + + RY+ILP + PY +TG A W A I E+ + Sbjct: 166 AGIQQTPQKLHEMARSLRLPPIAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLA- 224 Query: 530 GHIHLRTTGLGAYIAESTE 548 + GLG + +S + Sbjct: 225 -----SSEGLGYLLVQSRQ 238 >gi|328956726|ref|YP_004374112.1| phosphate ABC transporter [Carnobacterium sp. 17-4] gi|328673050|gb|AEB29096.1| phosphate ABC transporter [Carnobacterium sp. 17-4] Length = 306 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 VL P+++++ IP + GF+ TVV + +++ G G L+A F +F + +T Sbjct: 122 VLQPVVELLVGIPSVVYGFIGLTVVVPFVRSIFGGTGFGI-LSATFVLFVMILPTVTSMA 180 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L +PR E S + + WQ + + + +MPGL+ ++ M+ + +A +M++ Sbjct: 181 VDALNAVPRYYREASLAMGATRWQTIYKVVLRSAMPGLLTAVVFGMARAFGEALAVQMVI 240 Query: 215 VGDTVIP 221 ++P Sbjct: 241 GNAALMP 247 >gi|126734811|ref|ZP_01750557.1| glycine betaine/L-proline transport system permease, putative [Roseobacter sp. CCS2] gi|126715366|gb|EBA12231.1| glycine betaine/L-proline transport system permease, putative [Roseobacter sp. CCS2] Length = 512 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+G++ RP + IQP + PA VF ++ ++++ + MIF Sbjct: 344 LIGIPLGMFAARRPRFYAAIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 400 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + V+ G P +E A SF W + LP P G Sbjct: 401 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTRVDLPLASPSIRAG 450 >gi|254250444|ref|ZP_04943763.1| amino acid ABC transporter, permease protein [Burkholderia cenocepacia PC184] gi|124879578|gb|EAY66934.1| amino acid ABC transporter, permease protein [Burkholderia cenocepacia PC184] Length = 323 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + +I +IP L L + F IG + AI A+F + + +T + Y+ + N+P Sbjct: 167 VFNIGNTIPSLAVLAIALGIFG-------IG-NVPAIVALFLASLLPVTRNAYEGMKNVP 218 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 L E ++ ++GWQ + +P ++P +V + +++ Sbjct: 219 AALREAAKGIGMTGWQSLVRVELPNALPIIVGGVRTALA 257 >gi|29831397|ref|NP_826031.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29608512|dbj|BAC72566.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 289 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L+ +++ + L A+SR +L P L++++ IP + + ++ F + G Sbjct: 64 RILTGFLLAAVLGVATGVLVARSRLAEDLLGPPLEVLRPIPAIALVPVAILLFPSNEQGI 123 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V AA F + S T ++L + EE R+ W+ + +P ++P Sbjct: 124 VFITCTAAYFPVLVS-----TRHAVRALTPV---WEEAVRTMGAGRWRVLGSVVLPGALP 175 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 G+ + + + W V+++EMI Sbjct: 176 GIFGGLSVGIGVSWICVISAEMI 198 >gi|55821035|ref|YP_139477.1| phosphate ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822954|ref|YP_141395.1| phosphate ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|116627794|ref|YP_820413.1| ABC-type phosphate transport system, permease component [Streptococcus thermophilus LMD-9] gi|55737020|gb|AAV60662.1| phosphate ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738939|gb|AAV62580.1| phosphate ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] gi|116101071|gb|ABJ66217.1| ABC-type phosphate transport system, permease component [Streptococcus thermophilus LMD-9] Length = 304 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 L P ++++ IP + GF+ VV F+ G L+ F +F + +TF Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 +L +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 178 ALRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAVQMVVGN 237 Query: 217 DTVIP 221 VIP Sbjct: 238 SAVIP 242 >gi|315636350|ref|ZP_07891600.1| ABC superfamily ATP binding cassette transporter, membrane protein [Arcobacter butzleri JV22] gi|315479439|gb|EFU70122.1| ABC superfamily ATP binding cassette transporter, membrane protein [Arcobacter butzleri JV22] Length = 260 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 6/114 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I + G D K++A SFH+ + LP IF Y I+A G +W ++ Sbjct: 144 IFVGALQGTRTIEGDLKQMADSFHLPFTMKIFDLYLPHIFSYIFPAYISALGMSWKIVVM 203 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 +E+ S + G+GA +A + + P + V+IM +L + ++ P+ Sbjct: 204 AELLS------SSNGIGASLAIARSQLDTPVALALVVIMIGSLLFIEYLIFEPI 251 >gi|90407797|ref|ZP_01215974.1| ABC transporter permease protein [Psychromonas sp. CNPT3] gi|90311062|gb|EAS39170.1| ABC transporter permease protein [Psychromonas sp. CNPT3] Length = 262 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 21/174 (12%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+PIL Q+ P+ +++ KV+ A L F I T Y L Sbjct: 105 LMPILIASQAFPVFAIAPILMLWLGYGIASKVVMAALIIFFPICTC--------CYDGLR 156 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 N P+ ++ ++ S WQ Y+ +P S+P L + +++ V+A V G+ V Sbjct: 157 NTPQGYLDLVKTMGASKWQVLRYIQLPASLPTLASGIRVAV------VIAPIGAVAGEWV 210 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTML-----GVIFLYDQLLFRPMIVWSN 268 G+G Y+ L + L+ ++A L +L G+ FL D +L R +I W + Sbjct: 211 GSSEGLG-YLMLQANARMLIDEMFAALFILSALSVGLYFLTD-ILLRKLIHWQD 262 >gi|86748882|ref|YP_485378.1| nitrate transport permease [Rhodopseudomonas palustris HaA2] gi|86571910|gb|ABD06467.1| nitrate transport permease [Rhodopseudomonas palustris HaA2] Length = 299 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 14/160 (8%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L PI ++++IP L +L + F + P +AIF IF + +W + + + Sbjct: 140 LDPIFQVLRTIPPLAWLPLALAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIR 191 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 NIP+D V+ +L+ + F + +P + P + + + + W ++A+EM++ G Sbjct: 192 NIPQDYRNVAAVVQLNPLEFFTKVMLPSAAPYIFTGLRIGIGLSWLAIIAAEMLIGGV-- 249 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I A + I+ A+ + + F+ D+++ Sbjct: 250 ----GIGFFIWDAWNSSHISEIILALFYVGIIGFVLDRMI 285 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 6/112 (5%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W I+ N G P D++ VA+ + ++ ++LP PY TG G +W A Sbjct: 180 WPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFTKVMLPSAAPYIFTGLRIGIGLSWLAI 239 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 I +E+ G G+G +I ++ E++L + + L+R + Sbjct: 240 IAAEMLIGG------VGIGFFIWDAWNSSHISEIILALFYVGIIGFVLDRMI 285 >gi|320332813|ref|YP_004169524.1| ABC transporter integral membrane subunit [Deinococcus maricopensis DSM 21211] gi|319754102|gb|ADV65859.1| ABC-type transporter, integral membrane subunit [Deinococcus maricopensis DSM 21211] Length = 296 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 8/128 (6%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 F+ L SR ++L ++++IP L + +V+F GKV LA F ++ Sbjct: 121 FLLGILTGASRAAHLLLDSTFQMLRTIPNLALIPLVIVWFGIGETGKVFLIALATYFPVY 180 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + V + I L+E++R + LS + F + +P ++PG++ + ++ Sbjct: 181 LNTV--------HGVHGIDGRLKEMARVYGLSPAETFRRVTLPGALPGVLVGVRYALGIS 232 Query: 204 WFFVVASE 211 W +V SE Sbjct: 233 WLALVVSE 240 >gi|297163358|gb|ADI13070.1| hypothetical protein SBI_09952 [Streptomyces bingchenggensis BCW-1] Length = 304 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 30/50 (60%) Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 MY +L NIP+D+ E +R WQ W++ +P +V+ M+++ +GG Sbjct: 186 MYGALNNIPKDVMEAARIDGAGAWQTAWHVQIPMLRKWIVYMMILAFAGG 235 >gi|269966457|ref|ZP_06180541.1| glycine betaine/L-proline transport system permease [Vibrio alginolyticus 40B] gi|269828914|gb|EEZ83164.1| glycine betaine/L-proline transport system permease [Vibrio alginolyticus 40B] Length = 361 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 24/176 (13%) Query: 68 TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL + L+A+ LL A+S+ + PILD MQ+ P +L V+ F Sbjct: 141 TTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF--- 197 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ V +T Q +P +L E SF + Q + + +P Sbjct: 198 GIGNVPGVVVTIIFAL--PPVVRLTILGIQ---QVPEELIEAGHSFGANKKQMLYRIQLP 252 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++P G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 253 LALPTIMAGVNQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 297 >gi|47717445|gb|AAT37720.1| glycine betaine/L-proline transport system permease [Yersinia enterocolitica] Length = 290 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 121 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 175 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 176 TI---LGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 228 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 229 VVIASMIAVG-------GLGQMVLRGIGRLDM 253 >gi|299069872|emb|CBJ41154.1| Binding-protein-dependent transport systems (glycine betaine and nitrate/sulfonate/bicarbonate) inner membrane component, ABC transporter, permease protein [Ralstonia solanacearum CMR15] Length = 298 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 11/169 (6%) Query: 414 ISSKI-QPFAQLLAA----FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 I S++ Q F + L A PA P+ + ++ L N L +++ W + N Sbjct: 124 IGSRLGQDFLETLTAMFNPLPAIALLPI---ALVWFGLG-NGSLVFVIVHSVVWAVSLNT 179 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 AG + N + V ++ ++G + I++P FP +TG AW I SE+ Sbjct: 180 HAGFLSVSNTLRMVGRNYGLSGMAYLTRILIPAAFPSILTGLKIGWAFAWRTLIASELVF 239 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 + GLG YI E+ PEV G+L + L + ++ L Sbjct: 240 --GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 17/173 (9%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG + L M +P + L +V+F L G ++ F I S VW ++ + Sbjct: 127 RLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLV-------FVIVHSVVWAVSLN 178 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + ++ L V R++ LSG + +P + P ++ + + + W ++ASE++ Sbjct: 179 THAGFLSVSNTLRMVGRNYGLSGMAYLTRILIPAAFPSILTGLKIGWAFAWRTLIASELV 238 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263 G+G YI + ++LL I +LT++ + L + L+FR + Sbjct: 239 F--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 >gi|213026789|ref|ZP_03341236.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 349 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 249 ARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIIRL 303 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 T + +P DL E SRSF S Q + + +P +MP Sbjct: 304 TI---LGINQVPADLIEASRSFGASPRQMLFKVQLPLAMP 340 >gi|254439788|ref|ZP_05053282.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198255234|gb|EDY79548.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 289 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 14/163 (8%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A+ +++L A L +SR + M PI I+Q PI+ +Y + G ++ Sbjct: 93 LMALAVAVLGGVGLAVLFTQSRWMEMSFYPIAVILQVTPIVAIAPLIFIYVDSRMAGLLL 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 A L A F + + N T L + L ++ R + + WQK +L +P ++P Sbjct: 153 CAWLVAFFPVLS----NTTL----GLNSADHGLRDLFRIYGATRWQKLRFLQLPSALPYF 204 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + ++GG + A VV + V GIGS +A I E Sbjct: 205 LGG--LRIAGGLSLIGA----VVAEYVAGTGGIGSGLAFRILE 241 >gi|118467860|ref|YP_886840.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118169147|gb|ABK70043.1| ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit [Mycobacterium smegmatis str. MC2 155] Length = 288 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 24/197 (12%) Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 VVV ++AS + + V + + S ++P+ + A P +P++V Sbjct: 103 VVVSFVVASGLGVAVAYLMWRSAVVRSALEPYLSVFYAVPTFAVYPILV-----VLFGVG 157 Query: 450 LWLSLLMIFGTQWYI---LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 +W +++ + + I + N +AG + P ++ S +T W+ +R I+LP P Sbjct: 158 VWP--IVVLASTFSIVVVILNSLAGFDSVPEVVSKLDRSLKLTRWQSFRLILLPSAMPDI 215 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G + C S+++ +A L + GLG +IA++ + + E+ +LI+ Sbjct: 216 AAG-VKLC---MAYSVIATLAM--EFILASDGLGNFIADAYDSFAVAEMYGAILIVGALA 269 Query: 567 L--------ALNRFLWH 575 L ALNR W Sbjct: 270 LIANLGISAALNRLDWR 286 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 17/160 (10%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L P L + ++P VV F + ++P V+ + + + I S Sbjct: 131 LEPYLSVFYAVPTFAVYPILVVLFGVGVWPIVVLASTFSIVVVILNS---------LAGF 181 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 ++P + ++ RS +L+ WQ F + +P +MP + + + M+ +A E I+ D Sbjct: 182 DSVPEVVSKLDRSLKLTRWQSFRLILLPSAMPDIAAGVKLCMAYSVIATLAMEFILASD- 240 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G++IA A + +A +Y + ++G + L L Sbjct: 241 -----GLGNFIADA-YDSFAVAEMYGAILIVGALALIANL 274 >gi|226309354|ref|YP_002769314.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226188471|dbj|BAH36575.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 263 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 12/128 (9%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 A+ I VW + + N+ +L +RSFRL W++ + P SMP + + Sbjct: 131 AVALIVAVSVWPILLQTIHGVRNVDPELLATARSFRLPLWRRLALVVAPASMPYIFTGIR 190 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD------LLAILYAMLTMLGV 251 +S + + +E+I +PG+G I L+ D ++A L ML V Sbjct: 191 ISATLSLLLTIGAELIA------GVPGLGKEILLSQSVPDRMFALIIVAGLLGMLLAFAV 244 Query: 252 IFLYDQLL 259 + + ++LL Sbjct: 245 MAIENRLL 252 >gi|110679135|ref|YP_682142.1| glycine betaine/L-proline transport system permease, putative [Roseobacter denitrificans OCh 114] gi|109455251|gb|ABG31456.1| glycine betaine/L-proline transport system permease, putative [Roseobacter denitrificans OCh 114] Length = 513 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+G++ RP + IQP + PA VF ++ ++++ + MIF Sbjct: 345 LIGIPLGMFAARRPRFYAAIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 401 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + V+ G P +E A SF W + LP P G Sbjct: 402 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTRVDLPLASPSIRAG 451 >gi|254228316|ref|ZP_04921743.1| ABC transporter, permease protein [Vibrio sp. Ex25] gi|262394381|ref|YP_003286235.1| L-proline glycine betaine ABC transport system permease proW [Vibrio sp. Ex25] gi|151939122|gb|EDN57953.1| ABC transporter, permease protein [Vibrio sp. Ex25] gi|262337975|gb|ACY51770.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio sp. Ex25] Length = 363 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 24/176 (13%) Query: 68 TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL + L+A+ LL A+S+ + PILD MQ+ P +L V+ F Sbjct: 143 TTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF--- 199 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ V +T Q +P +L E SF + Q + + +P Sbjct: 200 GIGNVPGVVVTIIFAL--PPVVRLTILGIQ---QVPEELIEAGHSFGANKKQMLYRIQLP 254 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++P G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 255 LALPTIMAGVNQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 299 >gi|329928157|ref|ZP_08282103.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328938034|gb|EGG34433.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length = 258 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +RV++ S++ IPVGI IG I + +PF + P F L + Sbjct: 59 ISSYRVLLGWTFGSLLAIPVGIMIGKVGPIRAFAEPFLNFIRFIPPIAFITLFLVWFGIG 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+++ T + ++ N + G + D A S + W+ ++++P P Sbjct: 119 ETSK----IMLILYATFFIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVP 174 Query: 505 YYVTGAITACGGAWNASIVSEV 526 + TG A G ++ A I +E+ Sbjct: 175 FMFTGIRLAMGTSFMAIIGAEM 196 >gi|311896718|dbj|BAJ29126.1| putative ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 261 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/167 (19%), Positives = 74/167 (44%), Gaps = 8/167 (4%) Query: 47 DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 +++D + L Q + + R+ + ++ L L A+SR ++ P+L++ Sbjct: 42 EVLDALRAQLGTAVYWQDLADSLRRISTGFALAALLGVGTGVLTARSRLAADLVGPVLEL 101 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 ++ IP + + ++ F G V AA F + T + ++ +P E Sbjct: 102 VRPIPAIALVPVAIMLFPENEQGIVFITCAAAFFPV--------TVATRHAVRAVPPRWE 153 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 E R+ + + + +P ++PG+V + + + W V+++EM+ Sbjct: 154 EAVRTMGGGTGRVLFGVVLPGALPGVVGGLSVGLGVSWICVISAEMV 200 >gi|170750957|ref|YP_001757217.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] gi|170657479|gb|ACB26534.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] Length = 286 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 19/178 (10%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 IG P I + + P Q+L P + PL + + L P L+ G + IL N Sbjct: 116 IGRVPLIRALLDPALQVLRPVPVTAWLPL---AMILFGLGPRSAF-FLVFLGAFYPILVN 171 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G + E A+ TG + ++LP P TG G AW +V E+ Sbjct: 172 TVFGVRSVEPRLFEAAAMLGCTGPAQFVRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMT 231 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC-------FVLALNRFL--WHP 576 TGLGA I E+ + V+ G+ ++ V+ L+R L W P Sbjct: 232 GV------QTGLGAIIMEARQLSRTEIVICGMAVIGVAGFVSDWLVMQLSRRLLAWSP 283 >gi|66048099|ref|YP_237940.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|63258806|gb|AAY39902.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas syringae pv. syringae B728a] gi|330970748|gb|EGH70814.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 265 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 21/153 (13%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + NI Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNIDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F ++ +P +MP ++ + ++ W ++V +T+ Sbjct: 154 ALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLG 250 GIG Y+A+ +E D L +LYA+L L Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA 239 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R++ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVCLRWHPAY 257 >gi|220908632|ref|YP_002483943.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7425] gi|219865243|gb|ACL45582.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7425] Length = 294 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 14/187 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +++++ IP+G+ +G I + ++P L+ PA F PL++ + Sbjct: 102 SLGRVGVGFFLSALVSIPIGVLMGSFASIRALLEPLFGLVRYMPAPAFIPLLILYLGIGE 161 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW--WRYIILPGIF 503 P + L+ GT ++ V+ P D E +++ + G R +ILP + Sbjct: 162 -PPKI---ALIFMGTFFFNTLMVMDAVKFVPRDLIE--ATYMLGGNRREVLTQVILPHVL 215 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + + AW IVSE+ + T GLG I+ + E+ +G++++ Sbjct: 216 PGILDASRINLAAAWQLVIVSELIA------ATEGLGRRISVAGRFLRTDEIFVGLIVIG 269 Query: 564 CFVLALN 570 L+ + Sbjct: 270 IIGLSFD 276 >gi|163801350|ref|ZP_02195249.1| putative permease [Vibrio sp. AND4] gi|159174839|gb|EDP59639.1| putative permease [Vibrio sp. AND4] Length = 299 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 29/200 (14%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS + + + V A+S R+ V+ P+LD+MQ++P +L V Sbjct: 101 EDTMRTLSIITVCTMLAIVLGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVV-- 158 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + + +++ E + +F S Q+ Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASAKQRLV 211 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +MM++S M+V+ ++I + G+G + +I Q Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQY 260 Query: 238 LLAILYAMLTMLGVIFLYDQ 257 L L ++ + L+D+ Sbjct: 261 FTLGLLNGLAIVALAILFDR 280 >gi|330967519|gb|EGH67779.1| taurine ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 285 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + + A++ IPVGI IG P + P + PL+V Sbjct: 93 SLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYRPIPPLAYLPLIVIWFGIGE 152 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L L L IF I G A S T W+ R++I+P P Sbjct: 153 FSKVL-LIYLAIFAP---IAIATATGVRTVDPTRVRAAQSLGATRWQLIRHVIVPSALPD 208 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 209 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAII 262 Query: 566 VLALN 570 A+ Sbjct: 263 AFAME 267 >gi|330812274|ref|YP_004356736.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380382|gb|AEA71732.1| putative glycine betaine/L-proline ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 281 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 94/205 (45%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ +L +AA ++ P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVLFATLVCVLIGVPLGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P +L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPDELMDAGKAFGCSRRQLLS 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273 >gi|229494700|ref|ZP_04388458.1| taurine transport system permease protein TauC [Rhodococcus erythropolis SK121] gi|229318367|gb|EEN84230.1| taurine transport system permease protein TauC [Rhodococcus erythropolis SK121] Length = 260 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 12/128 (9%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 A+ I VW + + N+ +L +RSFRL W++ + P SMP + + Sbjct: 128 AVALIVAVSVWPILLQTIHGVRNVDPELLATARSFRLPLWRRLALVVAPASMPYIFTGIR 187 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD------LLAILYAMLTMLGV 251 +S + + +E+I +PG+G I L+ D ++A L ML V Sbjct: 188 ISATLSLLLTIGAELIA------GVPGLGKEILLSQSVPDRMFALIIVAGLLGMLLAFAV 241 Query: 252 IFLYDQLL 259 + + ++LL Sbjct: 242 MAIENRLL 249 >gi|296125453|ref|YP_003632705.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] gi|296017269|gb|ADG70506.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] Length = 256 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++FRV+ +A I+ IP+ +G+ I I+P Q L PA + PLVV Sbjct: 61 AISLFRVLSGFALAFIVSIPIAFLMGWYQPIQLLIEPIIQFLRNIPALAYIPLVVVA--- 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + ++++ I T ++ V G + A + +++P Sbjct: 118 QGVGESAKITVIFI-STFLVMIITVYQGVKEVDPTLIKAARVLGAKDKDIFLKVVIPASV 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 PY + G G + I +E+ GLG I E++ V+LG++++ Sbjct: 177 PYILVGMRLGLGASLTTLIAAELTG------SNAGLGQMIQEASLYFRMDIVMLGIILIG 230 Query: 564 CFVLALN 570 L LN Sbjct: 231 ITGLVLN 237 >gi|115380392|ref|ZP_01467388.1| ABC-type proline/glycine betaine transport system, periplasmic component [Stigmatella aurantiaca DW4/3-1] gi|115362604|gb|EAU61843.1| ABC-type proline/glycine betaine transport system, periplasmic component [Stigmatella aurantiaca DW4/3-1] Length = 586 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + +L A +SLL +AA+ R VL +LD+MQ+IP +L T++ Sbjct: 395 QPTMETLVLVLVATALSLLLGVPLGIVAARRPRFYAVLRLLLDLMQTIPTFVYLIPTLML 454 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG L+ + + + + +T Y + ++P+++ E +F Q Sbjct: 455 FGLGVVPGL-----LSTVVFVLPAPI-RLT---YLGITSVPKEMIEAGEAFGARPLQLLV 505 Query: 182 YLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P++ + G+ +M+S+S VV + ++ G G+GS + A+ D Sbjct: 506 KIELPYARKAILEGVTQALMLSLS----MVVIAALVGAG-------GLGSRVVRALNTVD 554 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + L D++ P Sbjct: 555 IRQGFEAGLVIVILAILLDRMFKHP 579 >gi|91223853|ref|ZP_01259117.1| glycine betaine/L-proline transport system permease [Vibrio alginolyticus 12G01] gi|91191345|gb|EAS77610.1| glycine betaine/L-proline transport system permease [Vibrio alginolyticus 12G01] Length = 361 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 24/176 (13%) Query: 68 TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL + L+A+ LL A+S+ + PILD MQ+ P +L V+ F Sbjct: 141 TTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF--- 197 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ V +T Q +P +L E SF + Q + + +P Sbjct: 198 GIGNVPGVVVTIIFAL--PPVVRLTILGIQ---QVPEELIEAGHSFGANKKQMLYRIQLP 252 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++P G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 253 LALPTIMAGVNQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 297 >gi|163846397|ref|YP_001634441.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aurantiacus J-10-fl] gi|222524164|ref|YP_002568635.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus sp. Y-400-fl] gi|163667686|gb|ABY34052.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aurantiacus J-10-fl] gi|222448043|gb|ACM52309.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus sp. Y-400-fl] Length = 268 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 17/210 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ T L ++L+ + A R L L P+L Q+IP++ +++ Sbjct: 73 QHTLATLSAALGGFTLALIIALILGYTLAHIRWLEQALAPVLAASQAIPVVAVAPLIILW 132 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F KV+ A L I + V ++ +IPR+L E++ + WQ Y Sbjct: 133 FGAGLTSKVLVAALITFLPILINTV--------VAIRSIPRELIEMAYISGANRWQLLRY 184 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P ++P L + ++ +A+ VVG+ V G+G+ I +A D I Sbjct: 185 VEAPLALPVLFGGVRTGLA------LATTGAVVGEFVAGRVGLGALINIARGLFDTPLIF 238 Query: 243 YAMLTMLGV---IFLYDQLLFRPMIVWSNK 269 A+ T+ + +++ LL R ++ W Sbjct: 239 VALATLALITLTLYVLAGLLERLLVRWEAS 268 >gi|312278354|gb|ADQ63011.1| ABC-type phosphate transport system, permease component [Streptococcus thermophilus ND03] Length = 304 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 L P ++++ IP + GF+ VV F+ G L+ F +F + +TF Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 +L +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 178 ALRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAVQMVVGN 237 Query: 217 DTVIP 221 VIP Sbjct: 238 SVVIP 242 >gi|295096321|emb|CBK85411.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 263 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 85/179 (47%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 VQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLVEMARSYGLSGFALFTHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ ILYA+L L + Q L R + W+ + + Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQWLERSWLRWNPAYTAQEAK 262 >gi|257466076|ref|ZP_05630387.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Fusobacterium gonidiaformans ATCC 25563] gi|315917232|ref|ZP_07913472.1| binding-protein-dependent transport system inner membrane component [Fusobacterium gonidiaformans ATCC 25563] gi|313691107|gb|EFS27942.1| binding-protein-dependent transport system inner membrane component [Fusobacterium gonidiaformans ATCC 25563] Length = 251 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 21/223 (9%) Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPV 404 +FW+C+ + + + + FT IW+ ++++RV++ I++ ++ IP+ Sbjct: 16 LFWYCMSIVLKKDLLPNPMITLETTFTLLITSSQIWIHVLVSLYRVMLGILLGTVFSIPM 75 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GI +G+ I L P VF P+ + L+ ++ ++ F I Sbjct: 76 GILLGYSKRIEKYFGEAFDFLYMIPKIVFLPIFFVLLGIGDLSKIALIATVLFFQQTILI 135 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS--- 521 NV N +E+ S I +W+ II +FP ++G T+ + S Sbjct: 136 RDNV-------KNISEEIYDSIRILQASFWQ-IIQHVVFPSCLSGIFTSVKSSLGISFAL 187 Query: 522 --IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 I AS +GLG +I + ++ + + +LI+ Sbjct: 188 LFITENFAS-------QSGLGYFITKCMDRRDYVTMYAAILIL 223 >gi|218531602|ref|YP_002422418.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|240140097|ref|YP_002964574.1| ABC superfamily transporter membrane protein [Methylobacterium extorquens AM1] gi|218523905|gb|ACK84490.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] gi|240010071|gb|ACS41297.1| ABC superfamily transporter membrane protein [Methylobacterium extorquens AM1] Length = 287 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +LP + + R+LS + +L +SR +L+P L++++ IP + ++ Sbjct: 85 ALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLA 144 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F + +E++ F FT ++ + + + ++ L +RS Sbjct: 145 ILMFPS--------SEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAI 196 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P + P +V + M WF +V +EMI Sbjct: 197 LREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMI 230 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + A + + +G+ IG + P ++L PA + PL + Sbjct: 93 SLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFPSSE 152 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ ++ + G + IL N + G + A S R +ILPG P Sbjct: 153 VS----MAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPS 208 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 VTGA G AW + +E+ S + G+G + ES ++ ++V+G+L++ Sbjct: 209 IVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLI 259 >gi|194289882|ref|YP_002005789.1| alkanesulfonate transporter; ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] gi|193223717|emb|CAQ69724.1| alkanesulfonate transport protein; ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 267 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 78/163 (47%), Gaps = 21/163 (12%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R +L L ++++IP L + +++F K+ L F ++ + Sbjct: 99 RTAATLLDSTLQMVRNIPALALIPLVILWFGIDESAKLFLVSLGVFFPVY--------LN 150 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y + ++ L E++RS+ LSGWQ + + +P ++PG++ + ++ W ++ Sbjct: 151 TYHGIRSVDAGLVEMARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWV------VL 204 Query: 214 VVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLG 250 +V +T+ GIG Y+ + +E D++ + LYA+L L Sbjct: 205 IVAETISAQSGIG-YMTMNAREFLQTDVVLVGILLYALLGKLA 246 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ + L L+ G + + N G + E+ Sbjct: 110 QMVRNIPALALIPLVIL---WFGIDESAKL-FLVSLGVFFPVYLNTYHGIRSVDAGLVEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ ++GW+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 ARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWVVLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCC-------FVLALNRF--LWHPLY 578 + E V++G+L+ L R+ WHP Y Sbjct: 220 TMNAREFLQTDVVLVGILLYALLGKLADWLSRGLERYWLRWHPGY 264 >gi|209552006|ref|YP_002283922.1| binding-protein-dependent transporters inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539599|gb|ACI59530.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 305 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 10/102 (9%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF-TSQVW 148 AAKS R VL PILD+MQ+IP +L V+ F G V G + I+A+ ++ Sbjct: 120 AAKSERFWTVLRPILDLMQTIPSFVYLVPIVMLF---SIGNVSGVIVTCIYALAPVVRLT 176 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 N+ +S D+ E S +F S Q + +P +MP Sbjct: 177 NLGIRQVRS------DMVEASNAFGASKRQTLVKVELPLAMP 212 >gi|66047934|ref|YP_237775.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|71734104|ref|YP_276848.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483034|ref|ZP_05637075.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624806|ref|ZP_06457760.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650617|ref|ZP_06481960.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298489209|ref|ZP_07007228.1| L-proline/glycine/betaine ABC transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|63258641|gb|AAY39737.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas syringae pv. syringae B728a] gi|71554657|gb|AAZ33868.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156291|gb|EFH97392.1| L-proline/glycine/betaine ABC transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326406|gb|EFW82459.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320330619|gb|EFW86597.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330871164|gb|EGH05873.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330954941|gb|EGH55201.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae Cit 7] gi|330970917|gb|EGH70983.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. aceris str. M302273PT] gi|330985873|gb|EGH83976.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011730|gb|EGH91786.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 281 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ ++ +AA ++ P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P++MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273 >gi|34498311|ref|NP_902526.1| taurine transport system permease [Chromobacterium violaceum ATCC 12472] gi|34104165|gb|AAQ60524.1| taurine transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 282 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 26/117 (22%), Positives = 58/117 (49%), Gaps = 8/117 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P+L+ + +P L +L V++F IG EL+ + IF + + + + + Sbjct: 121 LLDPMLEAYRPVPPLAYLPLIVIWFG-------IG-ELSKVLLIFLAILAPVAIATRHGV 172 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + R+ ++S S Q W + +P ++P ++ + + + GW +VA+E++ Sbjct: 173 AQVGRNRLRAAQSLGASRSQLLWLVVLPEALPQILTGIRIGLGAGWSTLVAAELVAA 229 >gi|110640632|ref|YP_668360.1| taurine transporter subunit [Escherichia coli 536] gi|170683056|ref|YP_001742499.1| taurine transporter subunit [Escherichia coli SMS-3-5] gi|191173479|ref|ZP_03035006.1| taurine uptake ABC transporter, permease protein [Escherichia coli F11] gi|215485455|ref|YP_002327886.1| taurine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|300936349|ref|ZP_07151277.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300997448|ref|ZP_07181788.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|312964620|ref|ZP_07778871.1| taurine transport system permease protein tauC [Escherichia coli 2362-75] gi|331645540|ref|ZP_08346644.1| taurine transport system permease protein TauC [Escherichia coli M605] gi|331671925|ref|ZP_08372721.1| taurine transport system permease protein TauC [Escherichia coli TA280] gi|331681761|ref|ZP_08382394.1| taurine transport system permease protein TauC [Escherichia coli H299] gi|110342224|gb|ABG68461.1| taurine transport system permease protein TauC [Escherichia coli 536] gi|170520774|gb|ACB18952.1| taurine uptake ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|190906188|gb|EDV65800.1| taurine uptake ABC transporter, permease protein [Escherichia coli F11] gi|215263527|emb|CAS07855.1| taurine transporter subunit TauC, membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|281177541|dbj|BAI53871.1| taurine ABC transporter permease component [Escherichia coli SE15] gi|300304267|gb|EFJ58787.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300458455|gb|EFK21948.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|312290641|gb|EFR18519.1| taurine transport system permease protein tauC [Escherichia coli 2362-75] gi|324010127|gb|EGB79346.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324010718|gb|EGB79937.1| ABC transporter, permease protein [Escherichia coli MS 60-1] gi|330910161|gb|EGH38671.1| taurine transport system permease protein TauC [Escherichia coli AA86] gi|331045702|gb|EGI17828.1| taurine transport system permease protein TauC [Escherichia coli M605] gi|331070914|gb|EGI42273.1| taurine transport system permease protein TauC [Escherichia coli TA280] gi|331080963|gb|EGI52128.1| taurine transport system permease protein TauC [Escherichia coli H299] Length = 275 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|67923047|ref|ZP_00516540.1| Binding-protein-dependent transport systems inner membrane component [Crocosphaera watsonii WH 8501] gi|67855126|gb|EAM50392.1| Binding-protein-dependent transport systems inner membrane component [Crocosphaera watsonii WH 8501] Length = 297 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 20/184 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++A++ L+ ++AK+ L V+ P+LD+MQ++P +L V+ F G+V Sbjct: 120 VVTAVLFCLMVGIPVGVISAKNDPLERVIRPLLDVMQTLPSFVYLVPVVMLFGI---GEV 176 Query: 132 IGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G IFAI ++ N+ + + ++ E + +F + WQ W +P +MP Sbjct: 177 PGVIATIIFAIPPLIRLTNL------GIRQVSPEVTEAAIAFGSTPWQVLWEAQIPLAMP 230 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ + ++ V + MI V PG+G + + D + A + LG Sbjct: 231 TILAGVNQAILMALSMSVVTSMIAV-------PGLGQMVLQGVGRLD---VGLAAVGGLG 280 Query: 251 VIFL 254 ++ L Sbjct: 281 IVLL 284 >gi|332703713|ref|ZP_08423801.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] gi|332553862|gb|EGJ50906.1| ABC-type transporter, integral membrane subunit [Desulfovibrio africanus str. Walvis Bay] Length = 281 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 29/196 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A ++++ L A S+ +++P+LD MQ++P +L + +F Sbjct: 101 LVATSLAIIIGMPLGILTALSQPAYRLIMPVLDFMQTMPAFVYLIPAIPFF--------- 151 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS- 188 L + AIF++ ++ M ++ + + +PR+L E S +F + QK L +P + Sbjct: 152 --GLGKVAAIFSTVIFAMPPAIRLTCLGIRQVPRELVEASDAFGATRGQKLLKLQLPMAA 209 Query: 189 ---MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 M G+ +M+++S M+VV +I G+G + AI+ D A Sbjct: 210 STIMAGVNQTVMLALS----------MVVVA-AMIGAKGLGGEVWKAIQRLDPARGFEAG 258 Query: 246 LTMLGVIFLYDQLLFR 261 L ++ V ++D+++ R Sbjct: 259 LGIVIVAMIFDRVMQR 274 >gi|325122236|gb|ADY81759.1| sulfate ester transport system permease protein [Acinetobacter calcoaceticus PHEA-2] Length = 279 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 9/108 (8%) Query: 469 IAGASA---FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 +A A A P + E+ + + W R IILP I P + G A G AW + E Sbjct: 161 LAAADAVKNIPKKYIELGQIYQLKTRAWLRLIILPSILPPLIGGLRIALGRAWLILVAVE 220 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + S G TG+G + + V++GV I L++ L Sbjct: 221 LLSAG------TGIGQMMELGRQMLRLDVVMVGVFITGVVGFGLDKVL 262 >gi|315925947|ref|ZP_07922152.1| ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315620768|gb|EFV00744.1| ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 265 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 34/153 (22%), Positives = 78/153 (50%), Gaps = 15/153 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ I + ++ F V++F IG + A+ IF + ++ + + +++ I Sbjct: 103 PVVQLLRPIAPVAWMPFIVLWFG-------IG-DAPAVAIIFIAGLFPVLLATARAVGQI 154 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +V+ +F +SGWQK + P + P ++ ++ ++ W F+V+ EM+ Sbjct: 155 APIYWQVADNFGMSGWQKIAKIVCPAAFPQIMASLQAAIGTAWIFLVSGEMVGAQS---- 210 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 G+G ++ + K L A++T++G+I L Sbjct: 211 --GLG-FLIMDCKNAIRSDALLAVMTVIGIIGL 240 >gi|304406597|ref|ZP_07388253.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304344655|gb|EFM10493.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 280 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 62/121 (51%), Gaps = 8/121 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+ + P + +++++P+L +++F KV+ L A F ++ + Sbjct: 112 SRRVEEYVNPTVQMIRTVPLLAITPLFIMWFGFGELSKVLLISLGAFFPLYVN------- 164 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + N+ L EVSR + S +++ L +P ++P ++ + +S+S W +V +E+ Sbjct: 165 -TFLGVRNVDAKLFEVSRVLQFSRYRQIVKLIIPAALPNILLGVRLSLSISWLVLVVAEL 223 Query: 213 I 213 + Sbjct: 224 V 224 >gi|90020770|ref|YP_526597.1| ABC transporter permease [Saccharophagus degradans 2-40] gi|89950370|gb|ABD80385.1| binding-protein-dependent transport systems inner membrane component [Saccharophagus degradans 2-40] Length = 271 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 14/199 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + RML + I+ L L LG L P++ + IP + L + Sbjct: 74 QDTKSSLKRMLMGLAIAALIGLTIGLLTGAIPMLGANLTPLVTAISLIPPMAILPILFIV 133 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F EL+ + I MT +YQ +PR+ +++ Q Sbjct: 134 FGL--------GELSKVVLIVIGIAPFMTRDIYQRTKELPREQLVKAQTLGAHSGQIIVR 185 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P +P L+ + +S+ W F++A+E I D G+G I L + + IL Sbjct: 186 VLLPQILPRLIDAVRLSLGSAWLFLIAAEAIASTD------GLGYRIFLVRRYMSMDVIL 239 Query: 243 YAMLTMLGVIFLYDQLLFR 261 ++ + + FL D +L R Sbjct: 240 PYVIWITFLAFLLDWMLVR 258 >gi|33862827|ref|NP_894387.1| glycine betaine/proline ABC transporter [Prochlorococcus marinus str. MIT 9313] gi|33634743|emb|CAE20729.1| ABC transporter,membrane component, glycine betaine/proline family [Prochlorococcus marinus str. MIT 9313] Length = 304 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 22/149 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++A +++L+ +A+ + + + P+LD+MQ++P +L V++F Sbjct: 105 VIAASLLALIIGIPIGIFSARRQHIWAITRPVLDLMQTMPAFVYLIPAVMFFGT------ 158 Query: 132 IGAELAAIFAIFTSQVWNMTFSM-------YQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + S + + FSM Y + +P DL E R+F S Q W + Sbjct: 159 ---------GLVPSTIATLIFSMPPVVRLTYLGIRQVPVDLIEAGRAFGCSERQLLWKVQ 209 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 +P ++P L+ + ++ VV + MI Sbjct: 210 LPNALPTLMAGVNQTIMLALSMVVIASMI 238 >gi|323191477|gb|EFZ76739.1| taurine transport system permease protein tauC [Escherichia coli RN587/1] Length = 275 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|302529978|ref|ZP_07282320.1| predicted protein [Streptomyces sp. AA4] gi|302438873|gb|EFL10689.1| predicted protein [Streptomyces sp. AA4] Length = 234 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 + ++++P LG +TF + F +IG + AI + Y L D Sbjct: 65 NAIRALPTLGLVTFLFLLFTESTTATIIGLVVLAIPPVLAGT--------YAGLQAAEHD 116 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMP 190 + + ++ ++GWQ+ W + VP ++P Sbjct: 117 VVDAAQGIGMTGWQRLWQVEVPIALP 142 >gi|238790131|ref|ZP_04633908.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia frederiksenii ATCC 33641] gi|238721800|gb|EEQ13463.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia frederiksenii ATCC 33641] Length = 357 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 227 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|288576399|ref|ZP_05978724.2| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Neisseria mucosa ATCC 25996] gi|288565600|gb|EFC87160.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Neisseria mucosa ATCC 25996] Length = 509 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 12/131 (9%) Query: 67 RTTLRMLSAMVISLLFTFVYAT-LA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + TL L +I+LL A LA A RR ++ + +I+Q+IP L L + + Sbjct: 14 QATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQTIPSLALLGLLIPF 73 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 P +I L A+ IF + Y L I ++E +F LS WQ W Sbjct: 74 VGIGSPPVLIALTLYALLPIFQN--------TYLGLSQIDPAIKEAHTAFGLSRWQALWR 125 Query: 183 LGVPFSMPGLV 193 + +P ++P ++ Sbjct: 126 IELPMALPAMI 136 >gi|121610087|ref|YP_997894.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121554727|gb|ABM58876.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 298 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 14/131 (10%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N + G + + +++ + + W+ +RY++ P PY++ G A G + ++V Sbjct: 171 ILSNTVIGLKSADRNLRDLFWLYRASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVV 230 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFVLALNRFL-- 573 +E + + TGL + I ES+ + P + +LG++I F AL+R + Sbjct: 231 AEFTA--GTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFVLFA-ALSRLVLG 287 Query: 574 -WHPLYLYGTR 583 WH + R Sbjct: 288 HWHESEMQHER 298 >gi|257067547|ref|YP_003153802.1| ABC-type nitrate/sulfonate/bicarbonate transporter permease [Brachybacterium faecium DSM 4810] gi|256558365|gb|ACU84212.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Brachybacterium faecium DSM 4810] Length = 278 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ R++V + ++ I VG+ +G +++ + P L P FP+++ Sbjct: 86 TLMRLLVGGGLGALAGIVVGLLMGSSRALNAALGPLFSALYPLPKIAIFPILLMI----- 140 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P ++ +F T ++IL N ++G A E +++ TG+ +R+++LPG P Sbjct: 141 FGPTETPKIIAVFITTFFILQINTVSGVWAIDRKLLEAGTAYGATGFARFRFVVLPGAMP 200 Query: 505 YYVTG 509 + +G Sbjct: 201 FVFSG 205 >gi|134098793|ref|YP_001104454.1| glycine betaine transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291005853|ref|ZP_06563826.1| glycine betaine transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133911416|emb|CAM01529.1| glycine betaine transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 295 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A +T +L A +I+++ LAA+ RR+ +V+ P+LD+MQ++P +L V++F Sbjct: 95 AMQTLALVLVASIIAVVIAIPVGILAARHRRVSLVVRPVLDLMQTMPAFVYL-IPVIFFF 153 Query: 125 NLYPGKVIGAELAAIFAI 142 N+ G V G IFA+ Sbjct: 154 NI--GSVPGVVATVIFAL 169 >gi|299772083|ref|YP_003734109.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter sp. DR1] gi|298702171|gb|ADI92736.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter sp. DR1] Length = 265 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 88/186 (47%), Gaps = 23/186 (12%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 SR +L L ++++IP L + +++F E A +F + + + Sbjct: 96 SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPIY 147 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + Y + ++ L E+ +S+ LS WQ + + +P +MP ++ + ++ W Sbjct: 148 INTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV------ 201 Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMIV 265 +++V +T+ GIG Y+ + +E D++ + LYA+L L + QLL R ++ Sbjct: 202 LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERYLLR 258 Query: 266 WSNKFR 271 W + ++ Sbjct: 259 WHSGYQ 264 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + I N G + E+ Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ ++ W+ ++ IILPG P + G A G W IV+E S G+G Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578 + E V++G+L+ VLA L R+L WH Y Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHSGY 263 >gi|257452130|ref|ZP_05617429.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Fusobacterium sp. 3_1_5R] gi|317058675|ref|ZP_07923160.1| binding-protein-dependent transport system inner membrane component [Fusobacterium sp. 3_1_5R] gi|313684351|gb|EFS21186.1| binding-protein-dependent transport system inner membrane component [Fusobacterium sp. 3_1_5R] Length = 251 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 21/223 (9%) Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-CITMFRVVVLIIIASIIWIPV 404 +FW+C+ + + + + FT IW+ ++++RV++ I++ ++ IP+ Sbjct: 16 LFWYCMSIVLKKDLLPNPMITLETTFTLLITSSRIWIHILVSLYRVMLGILLGTVFSIPM 75 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GI +G+ I L P VF P+ + L+ ++ ++ F I Sbjct: 76 GILLGYSKRIEKYFGEAFDFLYMIPKIVFLPIFFVLLGIGDLSKIALIATVLFFQQTILI 135 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS--- 521 NV N +E+ S I +W+ II +FP ++G T+ + S Sbjct: 136 RDNV-------KNISEEIYDSIRILQASFWQ-IIQHVVFPSCLSGIFTSVKSSLGISFAL 187 Query: 522 --IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 I AS +GLG +I + ++ + + +LI+ Sbjct: 188 LFITENFAS-------QSGLGYFITKCMDRRDYVTMYAAILIL 223 >gi|302539457|ref|ZP_07291799.1| nitrate ABC transporter, permease [Streptomyces sp. C] gi|302448352|gb|EFL20168.1| nitrate ABC transporter, permease [Streptomyces sp. C] Length = 295 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 10/166 (6%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W S+ + T DVL+ +++R + ++A +I P+G+ + + + + P Sbjct: 79 WDSLADLWFKGTLFDVLWT------SVWRGLSGFLLALVIGTPLGLLVARVRFVRAAVGP 132 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 L + P+ + P V + L+ N + +++ G I +++G P F Sbjct: 133 VLSGLQSLPSVAWVP---PAVLWLGLD-NSMMYAVILLGATPSIANGLVSGIDQVPPLFL 188 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 S TG R RY+++P P Y+ G +W + + +E+ Sbjct: 189 RAGRSLGATGLRGARYVVMPAALPGYLAGLKQGWAFSWRSLMAAEI 234 >gi|160902588|ref|YP_001568169.1| binding-protein-dependent transport systems inner membrane component [Petrotoga mobilis SJ95] gi|160360232|gb|ABX31846.1| binding-protein-dependent transport systems inner membrane component [Petrotoga mobilis SJ95] Length = 216 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 9/106 (8%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 +Y T K + G + + I I Q++P + + V FM + P AIFA+F Sbjct: 41 IYVTRPGKEKS-GRIALSITGIAQAVPSIAVIAL-VFLFMGIGPAP-------AIFALFL 91 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + +TF+ L I + ++E +R ++ + W + +P ++P Sbjct: 92 YSIVPITFNTASGLFGIDKGMKEAARGMGMTKREILWKVEIPNAIP 137 >gi|134097165|ref|YP_001102826.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] gi|291005378|ref|ZP_06563351.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] gi|133909788|emb|CAL99900.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] Length = 265 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 12/200 (6%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV++ L I R+ +IA ++ + +G +G P + A P V Sbjct: 58 SDVVFSDLLASIG--RIAAGWLIAVVVGVGIGTALGRSRTAMDYFGPLFAFVRAIPPPVL 115 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + ++ ++++ +FG W IL N + G + + A SF I +W Sbjct: 116 VPVFMVLLG---IGTSMQITVI-VFGVVWPILLNTVDGVRSVDQVKVDTARSFRIPPVQW 171 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 ++LP P G + A +VSE+ T G+G + S ++ P Sbjct: 172 VFGVVLPAAMPKIFAGLRVSLSLALVLMVVSELVG------STNGIGYQLVNSQQQFDLP 225 Query: 554 EVVLGVLIMCCFVLALNRFL 573 + G++++ ALN L Sbjct: 226 GMWTGIVLLGVLGYALNTVL 245 >gi|241895789|ref|ZP_04783085.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241870832|gb|EER74583.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 255 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 24/184 (13%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++R + ++I I +G+ G + Q++ P PL++ Sbjct: 66 ISLYRATIGLLIGGTIGFTLGVANGLSRISNLLFNSTVQMIRNIPHLALIPLII------ 119 Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 +WL + L+ G + I N + G + E+ S+ ++ W+ I Sbjct: 120 -----IWLGIGEPAKVTLVAIGVMFPIYINTLHGIQSIDPKLIEMGRSYQLSKWQMLTKI 174 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 I PG P + G A G W IVSE S ++G+G + + P + L Sbjct: 175 IFPGAMPTILMGIRYALGVMWTTLIVSETIS------SSSGIGYMETNAQQFLDMPTIFL 228 Query: 558 GVLI 561 ++I Sbjct: 229 AIII 232 >gi|226356352|ref|YP_002786092.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Deinococcus deserti VCD115] gi|226318342|gb|ACO46338.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease component [Deinococcus deserti VCD115] Length = 278 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%) Query: 107 MQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 +QSIP + F+ F +++F +N E A +F + + ++ +L N+P L Sbjct: 122 LQSIPSIAFVPFAILFFGLN---------ERAVLFVVILEGFIPVALAVSGALLNVPPAL 172 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 R+ G W + +P S+P L+ + + S W +V E+++ G Sbjct: 173 RIAGRTLGARGLALTWRVLLPASVPNLLTGLRTAWSFAWRALVGGELLIAG 223 >gi|213971168|ref|ZP_03399286.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382297|ref|ZP_07230715.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302058532|ref|ZP_07250073.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|213924037|gb|EEB57614.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 285 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G+++ Y D LG ++ R+ + + A++ IPVGI IG P + Sbjct: 73 GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEF 131 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL+V + L L L IF I G A Sbjct: 132 YRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPARVRAAQ 187 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S T W+ R++I+P P +TG G W+ + +E+ + T+GLG + Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQ 241 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 + + VVLG+L++ A+ Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267 >gi|171778758|ref|ZP_02919854.1| hypothetical protein STRINF_00706 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282715|gb|EDT48139.1| hypothetical protein STRINF_00706 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 571 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS R+ ++ PILD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 120 AKSDRVRSIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + IP +L E + SF + Q+ + + +P + + G+ +M+++S Sbjct: 177 L------GIREIPEELIEAAESFGSTEGQRLFKVELPLAKNTILAGVNQTIMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +VV ++I PG+G+ + A++ ++ A + L ++ + + D+ + Sbjct: 227 -------MVVTASMIGAPGLGNGVLSALQHAEIGAGFVSGLALVILAIIIDRFI 273 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 10/120 (8%) Query: 380 IWLGCITMFRVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +W G I F +V++ + SI I IP+GIW+ + S + P + PA V+ + Sbjct: 90 LWDGMINTFTLVLIASLMSIVIGIPLGIWMAKSDRVRSIVNPILDFMQTMPAFVYL---I 146 Query: 439 SCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWR 495 V+++ + P ++ S+ IF + F + G P + E A SF T G R ++ Sbjct: 147 PAVAFFGIGMVPGVFASV--IFALPPTVRFTNL-GIREIPEELIEAAESFGSTEGQRLFK 203 >gi|253573294|ref|ZP_04850637.1| binding-protein-dependent transport system inner membrane component [Paenibacillus sp. oral taxon 786 str. D14] gi|251846822|gb|EES74827.1| binding-protein-dependent transport system inner membrane component [Paenibacillus sp. oral taxon 786 str. D14] Length = 274 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 10/176 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A I+ IP+G+ IG+ P + P +L A P+ + + + Sbjct: 90 LLALIVAIPLGLIIGWYPVARELLNPILELFRNTAALALLPVFMLLLGIGETSK----IA 145 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++F W IL N IA + A S ++ + + +ILP P TG A Sbjct: 146 IVLFACAWPILLNTIAAVGNVDPLLIKSAKSMKLSSSKLFLKVILPASVPTIFTGIRMAG 205 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 GA I +E+ GLG I S P++ G+L + L +N Sbjct: 206 TGAILVLIAAEMVGAKE------GLGYLITYSQYNFEIPKMYAGILAISLLGLIIN 255 >gi|148257597|ref|YP_001242182.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409770|gb|ABQ38276.1| putative sulfonate ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 267 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 22/175 (12%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P DI L L ++A+ + R V+ L V L A+ RL + P+L Sbjct: 45 PTDIFKSSLELLQSGELAKHAAISARRAAGGFVVGALPAIVIGLLTARLPRLAAYVDPLL 104 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 + +SIP L + F V +F K+ A+ A W++ F ++ N Sbjct: 105 QMFRSIPPLALVPFGVFWFGIGETSKI------ALVA------WSVFFPVW---VNTEAG 149 Query: 165 LEEVS-----RSFRLSG--WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + EVS +F L WQ F+++ +P ++P ++ + +S+S +VA+E+ Sbjct: 150 VREVSPLLVRAAFCLGAKRWQMFFFVHLPAALPYIITGLKVSLSAAISTLVAAEL 204 >gi|225868631|ref|YP_002744579.1| phosphate ABC transporter permease [Streptococcus equi subsp. zooepidemicus] gi|225701907|emb|CAW99412.1| putative phosphate ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus] Length = 311 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 6/167 (3%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIP--ILGFL 116 +LP A + +LSA+V + + S + G L+ P ++++ IP + GF+ Sbjct: 84 ALPMIAGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143 Query: 117 TFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 VV + +++ G G L+ + +F + +TF SL +PR E S + Sbjct: 144 GLQVVVPFIRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGA 202 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ W + + + PG+ ++ M+ + +A +M+V V+P Sbjct: 203 TRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMP 249 >gi|222081336|ref|YP_002540699.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter K84] gi|221726015|gb|ACM29104.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter K84] Length = 268 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 24/164 (14%) Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQWYILF 466 I + P Q L P + PL + LW L L+ G + +L Sbjct: 103 IERYLNPVIQFLRPIPPIAYIPLAI-----------LWFGLGNPPAIFLIAIGAFFPVLI 151 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N I+G + + A++ +R +ILP PY +TG G A+ IV+E+ Sbjct: 152 NTISGVRNVDSIYVRAATNLGADRLTLFRRVILPAATPYILTGMRIGIGTAFIVVIVAEM 211 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +GLG I E+ E +V+ G++ + LA++ Sbjct: 212 IAV------NSGLGYRILEAREYMWSDKVIAGMIAIGLLGLAID 249 >gi|146342347|ref|YP_001207395.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195153|emb|CAL79178.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 255 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW S+ + FT D+L + T+ + ++ASI+ I +G IG + S + Sbjct: 43 AWASL---LRGFTSGDLLTKL---AGTLAHMAYGWLLASIVGIALGAMIGSSKAMRSYVA 96 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P +LL P + P+ ++ + L+ ++ L ++ FG+ W +L I G +A Sbjct: 97 PTLELLRPLPVSAIIPVAIAALG---LSQSMAL-FVIAFGSLWPMLLGTIHGFAAVEPRL 152 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTG 509 EVA H++ I LP P + G Sbjct: 153 YEVARVLHMSRLAVIFKIALPSAAPDILAG 182 >gi|116490694|ref|YP_810238.1| spermidine/putrescine ABC transporter permease protein [Oenococcus oeni PSU-1] gi|290890109|ref|ZP_06553192.1| hypothetical protein AWRIB429_0582 [Oenococcus oeni AWRIB429] gi|116091419|gb|ABJ56573.1| spermidine/putrescine ABC transporter permease protein [Oenococcus oeni PSU-1] gi|290480300|gb|EFD88941.1| hypothetical protein AWRIB429_0582 [Oenococcus oeni AWRIB429] Length = 272 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 M ++ +L I RDL + SR + WQ W L +P SMPG+ Sbjct: 153 MILPIFNALNEIDRDLVQASRDLGANSWQTLWRLIIPLSMPGV 195 >gi|297201640|ref|ZP_06919037.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] gi|197710988|gb|EDY55022.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] Length = 289 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 34/169 (20%), Positives = 75/169 (44%), Gaps = 11/169 (6%) Query: 48 IVDIVPITLDVHSLPQYASRTT---LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 + D+ D S P Y + T R+L+ +++ + L A+SR +L P+L Sbjct: 41 VTDVASAFADRLSGPDYWTDLTDSLTRILTGFLLAAVLGVATGVLIARSRLAEDLLGPVL 100 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++ IP + + ++ F + E +F FT+ + + S ++ + Sbjct: 101 EVVRPIPAIALVPVAILLFPS--------NEQGIVFITFTAAFFPVLVSTRHAVRALTPV 152 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 EE + W+ + +P ++PG+ + + + W V+++EMI Sbjct: 153 WEEAVLTMGGGRWRILASVVLPGALPGIFGGLSVGIGVSWICVISAEMI 201 >gi|146340088|ref|YP_001205136.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146192894|emb|CAL76899.1| Putative ABC transporter permease [Bradyrhizobium sp. ORS278] Length = 285 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ AIF +F + + + S + ++P + V+R + Q FW + +P +P L Sbjct: 148 GDVPAIFLVFITVFFTIVLSTSAQIESVPVNYIHVARIMGATQTQLFWRVILPSILPSLF 207 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + +++ G W V+ +E + VG G+G I++A + + + M + + F Sbjct: 208 MTLRLNLFGAWMVVLIAETVGVGT------GLGQIISMARATFNAKLVFFTMAVIGALGF 261 Query: 254 LYD 256 L D Sbjct: 262 LSD 264 >gi|301169059|emb|CBW28656.1| taurine transporter subunit [Haemophilus influenzae 10810] Length = 245 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + A L + SR++ VL+PIL I Q+IP+ V++F K++ + L F + Sbjct: 74 ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 T + Y L N P+ +++++F +S + + +P ++P + +++S Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRITVS--- 182 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259 VA VVG+ V G+G Y+ + + + +++A L +L I F D LL Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 238 Query: 260 FRPMIVWS 267 R +WS Sbjct: 239 HR--FIWS 244 >gi|195978039|ref|YP_002123283.1| phosphate transport system permease protein PstC [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225870417|ref|YP_002746364.1| phosphate ABC transporter permease protein [Streptococcus equi subsp. equi 4047] gi|195974744|gb|ACG62270.1| phosphate transport system permease protein PstC [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699821|emb|CAW93655.1| putative phosphate ABC transporter permease protein [Streptococcus equi subsp. equi 4047] Length = 311 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 6/167 (3%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIP--ILGFL 116 +LP A + +LSA+V + + S + G L+ P ++++ IP + GF+ Sbjct: 84 ALPMIAGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143 Query: 117 TFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 VV + +++ G G L+ + +F + +TF SL +PR E S + Sbjct: 144 GLQVVVPFIRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTTDSLRAVPRHYREASMAMGA 202 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ W + + + PG+ ++ M+ + +A +M+V V+P Sbjct: 203 TRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVGNSAVMP 249 >gi|163843831|ref|YP_001628235.1| binding-protein-dependent transport systems inner membrane component [Brucella suis ATCC 23445] gi|163674554|gb|ABY38665.1| binding-protein-dependent transport systems inner membrane component [Brucella suis ATCC 23445] Length = 278 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +LS+ + ++ AA L + P+LD+MQ++P +L +V+F + Sbjct: 95 KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG LA + + + + + + P L E +F S Q W + + Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P++MP GL +M+S+S Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225 >gi|118586187|ref|ZP_01543657.1| spermidine/putrescine ABC transporter permease protein [Oenococcus oeni ATCC BAA-1163] gi|118433373|gb|EAV40069.1| spermidine/putrescine ABC transporter permease protein [Oenococcus oeni ATCC BAA-1163] Length = 272 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 M ++ +L I RDL + SR + WQ W L +P SMPG+ Sbjct: 153 MILPIFNALNEIDRDLVQASRDLGANSWQTLWRLIIPLSMPGV 195 >gi|68248959|ref|YP_248071.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Haemophilus influenzae 86-028NP] gi|145628710|ref|ZP_01784510.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 22.1-21] gi|145640305|ref|ZP_01795889.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae R3021] gi|148825362|ref|YP_001290115.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Haemophilus influenzae PittEE] gi|260582552|ref|ZP_05850342.1| nitrate ABC transporter, permease [Haemophilus influenzae NT127] gi|319775776|ref|YP_004138264.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Haemophilus influenzae F3047] gi|319896686|ref|YP_004134879.1| abc-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae F3031] gi|329123618|ref|ZP_08252178.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] gi|68057158|gb|AAX87411.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 86-028NP] gi|144979180|gb|EDJ88866.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 22.1-21] gi|145274891|gb|EDK14753.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 22.4-21] gi|148715522|gb|ABQ97732.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae PittEE] gi|260094363|gb|EEW78261.1| nitrate ABC transporter, permease [Haemophilus influenzae NT127] gi|317432188|emb|CBY80540.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae F3031] gi|317450367|emb|CBY86583.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae F3047] gi|327469817|gb|EGF15282.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] Length = 245 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + A L + SR++ VL+PIL I Q+IP+ V++F K++ + L F + Sbjct: 74 ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 T + Y L N P+ +++++F +S + + +P ++P + +++S Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259 VA VVG+ V G+G Y+ + + + +++A L +L I F D LL Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 238 Query: 260 FRPMIVWS 267 R +WS Sbjct: 239 HR--FIWS 244 >gi|293611277|ref|ZP_06693575.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826528|gb|EFF84895.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325124007|gb|ADY83530.1| alkanesulfonate transport protein (ABC superfamily, membrane) [Acinetobacter calcoaceticus PHEA-2] Length = 265 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 88/187 (47%), Gaps = 23/187 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR +L L ++++IP L + +++F E A +F + + + Sbjct: 95 GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPI 146 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Y + ++ L E+ +S+ LS WQ + + +P +MP ++ + ++ W Sbjct: 147 YINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV----- 201 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264 +++V +T+ GIG Y+ + +E D++ + LYA+L L + QLL R ++ Sbjct: 202 -LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERYLL 257 Query: 265 VWSNKFR 271 W + ++ Sbjct: 258 RWHSGYQ 264 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + I N G + E+ Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ ++ W+ ++ IILPG P + G A G W IV+E S G+G Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578 + E V++G+L+ VLA L R+L WH Y Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHSGY 263 >gi|331651296|ref|ZP_08352321.1| taurine transport system permease protein TauC [Escherichia coli M718] gi|331051037|gb|EGI23089.1| taurine transport system permease protein TauC [Escherichia coli M718] Length = 275 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|148560547|ref|YP_001259451.1| putative glycine betaine/L-proline ABC transporter permease [Brucella ovis ATCC 25840] gi|225628017|ref|ZP_03786053.1| choline ABC transporter, permease protein [Brucella ceti str. Cudo] gi|254702297|ref|ZP_05164125.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella suis bv. 5 str. 513] gi|254710612|ref|ZP_05172423.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella pinnipedialis B2/94] gi|254714795|ref|ZP_05176606.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella ceti M644/93/1] gi|254717856|ref|ZP_05179667.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella ceti M13/05/1] gi|256032106|ref|ZP_05445720.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella pinnipedialis M292/94/1] gi|256369995|ref|YP_003107506.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Brucella microti CCM 4915] gi|260169241|ref|ZP_05756052.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Brucella sp. F5/99] gi|261219703|ref|ZP_05933984.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M13/05/1] gi|261318185|ref|ZP_05957382.1| binding-protein-dependent transport system inner membrane component [Brucella pinnipedialis B2/94] gi|261322592|ref|ZP_05961789.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M644/93/1] gi|261752865|ref|ZP_05996574.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 5 str. 513] gi|261758754|ref|ZP_06002463.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|265989216|ref|ZP_06101773.1| glycine betaine/L-proline ABC transporter permease [Brucella pinnipedialis M292/94/1] gi|294852895|ref|ZP_06793568.1| choline ABC transporter [Brucella sp. NVSL 07-0026] gi|306843073|ref|ZP_07475696.1| choline ABC transporter, permease protein [Brucella sp. BO2] gi|306844580|ref|ZP_07477167.1| choline ABC transporter, permease protein [Brucella sp. BO1] gi|148371804|gb|ABQ61783.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella ovis ATCC 25840] gi|225617180|gb|EEH14226.1| choline ABC transporter, permease protein [Brucella ceti str. Cudo] gi|256000158|gb|ACU48557.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Brucella microti CCM 4915] gi|260924792|gb|EEX91360.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M13/05/1] gi|261295282|gb|EEX98778.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M644/93/1] gi|261297408|gb|EEY00905.1| binding-protein-dependent transport system inner membrane component [Brucella pinnipedialis B2/94] gi|261738738|gb|EEY26734.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|261742618|gb|EEY30544.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 5 str. 513] gi|264661413|gb|EEZ31674.1| glycine betaine/L-proline ABC transporter permease [Brucella pinnipedialis M292/94/1] gi|294821484|gb|EFG38483.1| choline ABC transporter [Brucella sp. NVSL 07-0026] gi|306275024|gb|EFM56787.1| choline ABC transporter, permease protein [Brucella sp. BO1] gi|306286752|gb|EFM58302.1| choline ABC transporter, permease protein [Brucella sp. BO2] Length = 278 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +LS+ + ++ AA L + P+LD+MQ++P +L +V+F + Sbjct: 95 KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG LA + + + + + + P L E +F S Q W + + Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P++MP GL +M+S+S Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225 >gi|124023400|ref|YP_001017707.1| glycine/bertaine ABC transporter permease [Prochlorococcus marinus str. MIT 9303] gi|123963686|gb|ABM78442.1| ABC transporter,membrane component, glycine betaine/proline family protein [Prochlorococcus marinus str. MIT 9303] Length = 304 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 22/149 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++A +++L+ +A+ + + + P+LD+MQ++P +L V++F Sbjct: 105 VIAASLLALIIGIPIGIFSARRQHIWAITRPVLDLMQTMPAFVYLIPAVMFFGT------ 158 Query: 132 IGAELAAIFAIFTSQVWNMTFSM-------YQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + S + + FSM Y + +P DL E R+F S Q W + Sbjct: 159 ---------GLVPSTIATLIFSMPPVVRLTYLGIRQVPVDLIEAGRAFGCSERQLLWKVQ 209 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 +P ++P L+ + ++ VV + MI Sbjct: 210 LPNALPTLMAGVNQTIMLALSMVVIASMI 238 >gi|52080989|ref|YP_079780.1| glycine betaine ABC transporter permease [Bacillus licheniformis ATCC 14580] gi|52786365|ref|YP_092194.1| OpuAB [Bacillus licheniformis ATCC 14580] gi|319645053|ref|ZP_07999286.1| OpuAB protein [Bacillus sp. BT1B_CT2] gi|52004200|gb|AAU24142.1| glycine betaine ABC transporter (permease) [Bacillus licheniformis ATCC 14580] gi|52348867|gb|AAU41501.1| OpuAB [Bacillus licheniformis ATCC 14580] gi|317392862|gb|EFV73656.1| OpuAB protein [Bacillus sp. BT1B_CT2] Length = 284 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ++++++IS++ ++ + + V+ PILD+MQ++P +L ++F N+ Sbjct: 95 QTLALVVTSVLISVIIGIPVGIWGSQKKTVRRVVTPILDLMQTMPAFVYL-LPAIFFFNI 153 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ MT Q +P DL E + +F + Q+ + + +P Sbjct: 154 --GVVPGVVASVIFAM--PPTIRMTILGIQ---QVPEDLIEATEAFGSTTSQRLFKVQLP 206 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + ++ + S+ ++A M+V+ +++ PG+G + A+ + Sbjct: 207 LATKTILAGINQSI------MLALSMVVIA-SMVGAPGLGEEVYRAVTQ 248 >gi|16272305|ref|NP_438518.1| ABC transporter permease [Haemophilus influenzae Rd KW20] gi|260580580|ref|ZP_05848408.1| nitrate ABC transporter, permease [Haemophilus influenzae RdAW] gi|2501390|sp|Q57306|Y355_HAEIN RecName: Full=Probable ABC transporter permease protein HI_0355 gi|1573324|gb|AAC22015.1| ABC transporter, permease protein [Haemophilus influenzae Rd KW20] gi|260092922|gb|EEW76857.1| nitrate ABC transporter, permease [Haemophilus influenzae RdAW] Length = 245 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + A L + SR++ VL+PIL I Q+IP+ V++F K++ + L F + Sbjct: 74 ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 T + Y L N P+ +++++F +S + + +P ++P + +++S Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259 VA VVG+ V G+G Y+ + + + +++A L +L I F D LL Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 238 Query: 260 FRPMIVWS 267 R +WS Sbjct: 239 HR--FIWS 244 >gi|86147801|ref|ZP_01066108.1| glycine betaine/L-proline transport system permease [Vibrio sp. MED222] gi|85834439|gb|EAQ52590.1| glycine betaine/L-proline transport system permease [Vibrio sp. MED222] Length = 364 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S + PILD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 168 ARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 222 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P +L E SF S Q + + +P ++P G+ +M+S+S Sbjct: 223 TILGIQ---QVPEELIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 275 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 276 VVIASMIAVG-------GLGQMVLRGIGRLDM 300 >gi|145638735|ref|ZP_01794344.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae PittII] gi|145272330|gb|EDK12238.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae PittII] gi|309750225|gb|ADO80209.1| Probable ABC transporter permease protein [Haemophilus influenzae R2866] Length = 245 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + A L + SR++ VL+PIL I Q+IP+ V++F K++ + L F + Sbjct: 74 ISALLLSFSRQISAVLLPILIISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 T + Y L N P+ +++++F +S + + +P ++P + +++S Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259 VA VVG+ V G+G Y+ + + + +++A L +L I F D LL Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVNLMFAALLILVSISLCLYFSIDWLL 238 Query: 260 FRPMIVWS 267 R +WS Sbjct: 239 HR--FIWS 244 >gi|315181935|gb|ADT88848.1| glycine betaine/L-proline transport system permease [Vibrio furnissii NCTC 11218] Length = 368 Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 172 ARSDTAAKIVRPVLDAMQTTPAFVYLVPIVMLFGI---GNVPGVVVTIIFAL--PPIVRL 226 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P +L E +F S Q + + +P +MP G+ +M+S+S Sbjct: 227 TILGIQ---QVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLS----M 279 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 280 VVIASMIAVG-------GLGQMVLRGIGRLDM 304 >gi|238762666|ref|ZP_04623635.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia kristensenii ATCC 33638] gi|238698971|gb|EEP91719.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia kristensenii ATCC 33638] Length = 358 Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 173 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 227 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 228 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 280 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 281 VVIASMIAVG-------GLGQMVLRGIGRLDM 305 >gi|118589847|ref|ZP_01547251.1| putative ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118437344|gb|EAV43981.1| putative ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 273 Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 41/80 (51%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ELA I I M S Q++ +IPR++ + + S WQ L +P +P L+ Sbjct: 136 GELAKIALIVIGTAPVMIRSTAQAVLDIPREMIIKAETLGASVWQMVTRLVLPQVLPHLI 195 Query: 194 WNMMMSMSGGWFFVVASEMI 213 ++ +S+ W F++++E I Sbjct: 196 TSLRLSLVPAWIFLISAEAI 215 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 11/163 (6%) Query: 379 VIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++WL +++R+ + +++++ + GI IGF PH+ S + P+ + P P++ Sbjct: 70 LLWLDSFDSLWRLGTGMAVSTLLALSFGIAIGFIPHVRSALAPYLATFSLIPPITILPIL 129 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L L++ GT ++ + P + A + + W+ + Sbjct: 130 FITFGLGELAKI----ALIVIGTAPVMIRSTAQAVLDIPREMIIKAETLGASVWQMVTRL 185 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +LP + P+ +T + AW I +E + T+GLG Sbjct: 186 VLPQVLPHLITSLRLSLVPAWIFLISAEAIA------STSGLG 222 >gi|254513156|ref|ZP_05125222.1| taurine ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] gi|221533155|gb|EEE36150.1| taurine ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] Length = 421 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV I ++I IP+G +G P + + P PLV+ + Sbjct: 230 SLLRVVAGFIAGALIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + AG S A S + W+ R++I+P P Sbjct: 290 TGK----IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 8/114 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F GK++ +F + +W MT + + + Sbjct: 264 PIVEFMRPVPPLALIPLVIIWFGIWETGKIV--------LLFLAALWIMTIAARAGVSGV 315 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + S S WQ ++ VP S+P + ++M W VVA+E++ Sbjct: 316 NISKIHAAYSLGASKWQIMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369 >gi|288919297|ref|ZP_06413632.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EUN1f] gi|288349291|gb|EFC83533.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EUN1f] Length = 339 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 12/207 (5%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 +PP+ R P + L+A+ L G+ L G +E P D+V L + Sbjct: 88 IPPWTRRLAGPALL-LVAWSLATGLN---LVGDRELAPPGDVVGAARELWSSGELADNLA 143 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++I + A +A R V+ ++ +++IP++ L +V+ Sbjct: 144 TSLFRVAWGLLIGVALGLALAVVAGFFRFGEDVVDSAMNFLRAIPVIALLPLIIVWIG-- 201 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 IG E A IF I + + + + ++ + L E R+F LS + +P Sbjct: 202 -----IGEE-AKIFLITVGVTFPIYMNTFAAIRGVDIKLVEAGRAFGLSRTGLIRRVIIP 255 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++PG + + SM W VV +E + Sbjct: 256 GALPGFLVGLRWSMGVAWLLVVFAEQV 282 >gi|283785927|ref|YP_003365792.1| ABC transporter permease [Citrobacter rodentium ICC168] gi|282949381|emb|CBG88992.1| ABC transporter permease protein [Citrobacter rodentium ICC168] Length = 385 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154 +L+I+Q+IP + G L + + +P G A+ A+ + + + Sbjct: 215 VLNIIQTIPSVALFGLLIAPLAGLVKAFPWLASLGVAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L +PRD++E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VAGLDQVPRDVQESARAMGMSGVQRFLHVQLPLALP 310 >gi|221210668|ref|ZP_03583648.1| inner membrane protein [Burkholderia multivorans CGD1] gi|221169624|gb|EEE02091.1| inner membrane protein [Burkholderia multivorans CGD1] Length = 321 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A V+S+ LA++S L +L+P+LD+MQ++P +L ++ F Sbjct: 95 QTLALMLVATVLSVAIGVPLGILASRSAALRRMLLPVLDVMQTLPSFVYLIPVLMLF--- 151 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV A LA I + + Q + D+ E +R+F + WQ + +P Sbjct: 152 GLGKVP-AILATIIYALPPLIRLTDLGIRQ----VDPDVTEAARAFGTTRWQLLLNVQLP 206 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 + P G+ MM++S VV + MI Sbjct: 207 LARPNIMAGINQTTMMALS----MVVIASMI 233 >gi|23502444|ref|NP_698571.1| glycine betaine/L-proline ABC transporter permease [Brucella suis 1330] gi|161619521|ref|YP_001593408.1| binding-protein-dependent transport systems inner membrane component [Brucella canis ATCC 23365] gi|254704827|ref|ZP_05166655.1| binding-protein-dependent transport systems inner membrane component [Brucella suis bv. 3 str. 686] gi|260565930|ref|ZP_05836400.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|261755523|ref|ZP_05999232.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 3 str. 686] gi|23348434|gb|AAN30486.1| glycine betaine/L-proline ABC transporter, permease protein, putative [Brucella suis 1330] gi|161336332|gb|ABX62637.1| binding-protein-dependent transport systems inner membrane component [Brucella canis ATCC 23365] gi|260155448|gb|EEW90528.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|261745276|gb|EEY33202.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 3 str. 686] Length = 278 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +LS+ + ++ AA L + P+LD+MQ++P +L +V+F + Sbjct: 95 KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG LA + + + + + + P L E +F S Q W + + Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P++MP GL +M+S+S Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225 >gi|256160302|ref|ZP_05457996.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella ceti M490/95/1] gi|256255506|ref|ZP_05461042.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella ceti B1/94] gi|261222715|ref|ZP_05936996.1| binding-protein-dependent transport system inner membrane component [Brucella ceti B1/94] gi|265998679|ref|ZP_06111236.1| glycine betaine/L-proline ABC transporter permease [Brucella ceti M490/95/1] gi|260921299|gb|EEX87952.1| binding-protein-dependent transport system inner membrane component [Brucella ceti B1/94] gi|262553303|gb|EEZ09137.1| glycine betaine/L-proline ABC transporter permease [Brucella ceti M490/95/1] Length = 278 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +LS+ + ++ AA L + P+LD+MQ++P +L +V+F + Sbjct: 95 KTLTLVLSSCFVCMVIGVPLGIAAAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + PG LA + + + + + + P L E +F S Q W + + Sbjct: 155 MVPGL-----LATVIFVIPAPIRLTQLGISST----PASLIEAGEAFGASRSQLLWKVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P++MP GL +M+S+S Sbjct: 206 PYAMPQILAGLTQTIMLSLS 225 >gi|226325516|ref|ZP_03801034.1| hypothetical protein COPCOM_03321 [Coprococcus comes ATCC 27758] gi|225206259|gb|EEG88613.1| hypothetical protein COPCOM_03321 [Coprococcus comes ATCC 27758] Length = 241 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 9/159 (5%) Query: 56 LDVHSLPQYASRTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 +D +L ++ +LR+L + I + + S+R+ + PI+ ++ IP Sbjct: 35 IDDRALLLKSTLYSLRLLFTGYFIGAILGLITGVACGYSKRINYWVSPIIKMLGPIPSTT 94 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 ++ +V +L+ G V L FA +T + + N+ + E +R+ Sbjct: 95 WIPIIMVLVSSLFKGSVFIIALGVWFA--------LTIASSTGIQNVDKAYLEAARTLGA 146 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 G Q + + +P +MP ++ M MS ++ +EM+ Sbjct: 147 KGHQLVFRVAIPHAMPNILQGMTQGMSSACTALLVAEMM 185 >gi|254455460|ref|ZP_05068889.1| glycine betaine ABC transport system integral membrane protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082462|gb|EDZ59888.1| glycine betaine ABC transport system integral membrane protein [Candidatus Pelagibacter sp. HTCC7211] Length = 709 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 26/228 (11%) Query: 66 SRTTLRMLSAMV-ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TL ++ V + + F + L ++S R + P+LD MQ +P +L F ++F Sbjct: 134 SMQTLALMGLSVFLCVFFGVILGILCSQSNRFDNFMKPVLDTMQVMPAFVYL-FPALFFF 192 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + I A + I+A+ V +T S + + ++ E + SF S Q + + Sbjct: 193 GIGGAPAILATM--IYAM--PPVIRLTNS---GIRQVSKETIESATSFGSSKLQLLYKIK 245 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P S+P ++MM ++ ++ + +VV I GIG + LAI+ D+ + Sbjct: 246 IPLSLP----SIMMGINQ---VIMMALALVVLACFIGAEGIGGQVWLAIRNLDVGWAMEG 298 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292 L +L + L+D+ +S F + T P+D YL +T Sbjct: 299 GLCILFMAILFDR--------FSMSFSKQEET--LPSDVQKFYLLPQT 336 >gi|163732479|ref|ZP_02139924.1| glycine betaine/L-proline transport system permease, putative [Roseobacter litoralis Och 149] gi|161393839|gb|EDQ18163.1| glycine betaine/L-proline transport system permease, putative [Roseobacter litoralis Och 149] Length = 513 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+G++ RP S IQP + PA VF ++ ++++ + MIF Sbjct: 345 LIGIPLGMFCARRPKFYSFIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 401 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + V+ G P +E A SF W + LP P G Sbjct: 402 GGTPVVRLTVL-GLRGVPESVREAAISFGANKWYLLTRVDLPLAAPSIRAG 451 >gi|91224154|ref|ZP_01259417.1| putative permease [Vibrio alginolyticus 12G01] gi|91191065|gb|EAS77331.1| putative permease [Vibrio alginolyticus 12G01] Length = 299 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 25/172 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R+ V+ P+LD+MQ++P +L V M L GK+ G I+AI ++ N Sbjct: 129 ARSNRIQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ + + +P +MP G+ +MM++S Sbjct: 186 LGIRL------VDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS---- 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 M+V+ ++I + G+G + +I Q L L ++ + L+D+ Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|332638601|ref|ZP_08417464.1| ABC-type proline/glycine betaine transport system, permease component [Weissella cibaria KACC 11862] Length = 572 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 31/156 (19%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWN 149 AK + ++ P+LD MQ++P +L V +F + + PG +F S ++ Sbjct: 119 AKKETVAKIVQPVLDFMQTMPGFVYLIPAVAFFGIGVVPG------------VFASVIFA 166 Query: 150 MTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSG 202 + ++ S + +P+DL E + S+ + QK + L +P + + G+ +M+++S Sbjct: 167 LPPTVRMSNLGIRQVPKDLVEAADSYGSTPKQKLFKLELPLATGTILAGINQTIMLALS- 225 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ D+ Sbjct: 226 ---------MVVIA-SMIGAPGLGRGVLSAVQNADI 251 >gi|325264233|ref|ZP_08130965.1| nitrate transport permease protein NrtB [Clostridium sp. D5] gi|324030717|gb|EGB92000.1| nitrate transport permease protein NrtB [Clostridium sp. D5] Length = 262 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 17/196 (8%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+V I++S+ VG+ +G + P ++ P + PL + + Sbjct: 69 ISLSRVLVGYILSSVAGTLVGLIMGASKLGKAIFNPIFNIIKPIPGIAWIPLAI----LW 124 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 N+ + ++ G ++ N +AGA + VA + R + I+LP P Sbjct: 125 FGTGNVTIYFIIFVGGFAQMVMNTMAGAENVSQELIGVARVLGLKKNRIFLTIVLPSCVP 184 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV----- 559 Y +G + +W A + +E+ + T+G G I + G+ V+G+ Sbjct: 185 YIFSGLQVSLSTSWMAVLAAEMIT------ATSGCGWLILSGMQSGNMVNNVMGMISIGI 238 Query: 560 --LIMCCFVLALNRFL 573 LI+ F+ + R L Sbjct: 239 VGLILASFMRVMERRL 254 >gi|254775846|ref|ZP_05217362.1| ABC transporter permease protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 282 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 8/148 (5%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +++ LR+L+ ++ + L +SR V P+ ++ + IP + + ++ F Sbjct: 84 AQSLLRILTGFGLAAVIGVATGVLLGRSRLFADVFGPLAELARPIPAIAMVPVAILLFPT 143 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G V LAA F I S ++ +P E+ R+ WQ + + Sbjct: 144 DEAGIVFITFLAAYFPIMVST--------RHAVRALPTLWEDSVRTLGGGRWQVLTQVVL 195 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213 P +PG+ + + M W V+++EMI Sbjct: 196 PGILPGVFGGLSVGMGVAWICVISAEMI 223 >gi|199597244|ref|ZP_03210675.1| ABC-type phosphate transport system, permease component [Lactobacillus rhamnosus HN001] gi|258507902|ref|YP_003170653.1| phosphate ABC transporter permease [Lactobacillus rhamnosus GG] gi|258539148|ref|YP_003173647.1| phosphate ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199591760|gb|EDY99835.1| ABC-type phosphate transport system, permease component [Lactobacillus rhamnosus HN001] gi|257147829|emb|CAR86802.1| ABC transporter, phosphate transporter permease protein [Lactobacillus rhamnosus GG] gi|257150824|emb|CAR89796.1| ABC transporter, phosphate transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259649229|dbj|BAI41391.1| phosphate ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 307 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 6/170 (3%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIP--IL 113 +V +LP + LSA+V + + S + G VL P+++++ IP + Sbjct: 79 EVGALPMIVGSFGVTFLSAIVATPFAVGAGIFMTEISHKWGQKVLQPVIELLVGIPSVVY 138 Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 GF+ +V+ + +++ G G LA F +F + +T +L +PR E S + Sbjct: 139 GFIGLSVIVPFIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLA 197 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ + + + ++PG++ ++ M+ + +A +M++ ++P Sbjct: 198 LGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLP 247 >gi|28867693|ref|NP_790312.1| glycine/betaine/L-proline ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213967765|ref|ZP_03395912.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382401|ref|ZP_07230819.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302061206|ref|ZP_07252747.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132422|ref|ZP_07258412.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28850928|gb|AAO54007.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213927541|gb|EEB61089.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|330874755|gb|EGH08904.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965478|gb|EGH65738.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015007|gb|EGH95063.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 281 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ ++ +AA ++ P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P++MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273 >gi|331017063|gb|EGH97119.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 285 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G+++ Y D LG ++ R+ + + A++ IPVGI IG P + Sbjct: 73 GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEF 131 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL+V + L L L IF I G A Sbjct: 132 YRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPARVRAAQ 187 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S T W+ R++I+P P +TG G W+ + +E+ + T+GLG + Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQ 241 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 + + VVLG+L++ A+ Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267 >gi|332715855|ref|YP_004443321.1| putative aliphatic sulfonates transport permease ssuC [Agrobacterium sp. H13-3] gi|325062540|gb|ADY66230.1| putative aliphatic sulfonates transport permease protein ssuC [Agrobacterium sp. H13-3] Length = 289 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 16/187 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+ VI L V +L L P ++++P L ++ +++F Sbjct: 89 STARVFVGFVIGSLLAIVVGSLVGLVVAAERYLEPTFQALRAVPSLAWVPLLMIWFG--- 145 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IG E + I I S + + +++ + N+ R L EV +R W + +P Sbjct: 146 ----IG-ETSKIVLIAKSAFFPVYLNLFSGIRNVDRKLVEVGEMYRQPLPVLVWRIFIPA 200 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA--LAIKEQDLLAILYAM 245 S+P L + +S W VVA+E++ + GIG ++ + DL+ I Sbjct: 201 SLPHLFTGLRYGLSLAWLSVVAAELLAASE------GIGYMLSDGRELSRPDLVMIAIIC 254 Query: 246 LTMLGVI 252 L +LG I Sbjct: 255 LAVLGKI 261 >gi|309388777|gb|ADO76657.1| binding-protein-dependent transport systems inner membrane component [Halanaerobium praevalens DSM 2228] Length = 250 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 7/146 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R L A +++L A L + + L L P++ I+Q+ P + +++ VV+F Sbjct: 58 TLKRTLIAYTLAVLVGITLALLLHRFQLLAKTLRPLITIIQATPPVLWVSLAVVWFG--- 114 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + A+L IF IF V + +++Q+L + DL E++ ++ ++ + +P Sbjct: 115 ----VSADLTPIFLIFIVSVPVIFVNIFQALEEMNTDLIEMAHAYSTPSFKILKEIYLPA 170 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213 +P LV + ++ + W V +E I Sbjct: 171 LLPALVSALSIAFAFAWKSSVFAEFI 196 >gi|220924746|ref|YP_002500048.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219949353|gb|ACL59745.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 281 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 40/233 (17%) Query: 62 PQYASRTTLRMLSAMVISLLF---------TFVYATLAAK--------SRRLGMVLVPIL 104 PQ + +ML+A ++L F F+Y + AA SRR+ P Sbjct: 65 PQLVAAAFWKMLTAQNLALDFLASISIVGQAFLYGSAAAILLGIAAGLSRRVEEFFGPTF 124 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 D ++ IP + +L V++ P KV+ + F +F + Q + N+ ++ Sbjct: 125 DTIRHIPGIAWLPLIVLWLGIGAPAKVLVIAKSVFFPVF--------LNTLQGIRNVDKN 176 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 E++R+ L+ WQ + +P ++P ++ ++ + W ++VV + + L G Sbjct: 177 HVELARALTLTRWQLVRRVVLPSALPSILVSLRYAAGLAW------ALVVVAEGLSGLEG 230 Query: 225 IGSYIALAIKEQDLLAILYAMLTM--LGVI-FLYDQ---LLFRPMIVWSNKFR 271 +G I + Q LL M+ M +G++ F D+ L+ R ++ W F Sbjct: 231 LGFLI---FRAQGLLLTDQLMVCMVVIGLVGFAIDRGMALVQRRLLRWKQGFE 280 >gi|296156098|ref|ZP_06838937.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295893604|gb|EFG73383.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 323 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 10/176 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +++S+I +P+GI G I+ +PF + PA F L+V+ + Y P + Sbjct: 139 VLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD-GPKI---A 194 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + V E A + ++ ++++PGI P Sbjct: 195 IIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKFKLLTHVVIPGILPDLYRDQRILL 254 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW IV+E+ ++G+ YI + F V ++++ L + Sbjct: 255 GWAWTYLIVAELVG------TSSGITWYITQQARYEHFENVYAAIMMIGIIGLGTD 304 >gi|161523068|ref|YP_001585997.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189348106|ref|YP_001941302.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160346621|gb|ABX19705.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189338244|dbj|BAG47312.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 292 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 27/142 (19%), Positives = 67/142 (47%), Gaps = 8/142 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + +L FV ++A +R +L + + +P + L +++F L G + Sbjct: 99 LLRGYALGVLLAFVLTSVAVSTRFGRDLLTMLTSMFNPLPSIALLPIALLWF-GLGTGSL 157 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + F + + +W + +MY +P L R++ L+G ++ + VP ++P Sbjct: 158 L-------FVLVHAVLWPLAVNMYTGFVGVPATLRMAGRNYGLTGLRQVLLILVPAALPS 210 Query: 192 LVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 211 ILSGLRVGWAFAWRTLIAAELV 232 >gi|307130327|ref|YP_003882343.1| Taurine transport system permease tauC [Dickeya dadantii 3937] gi|306527856|gb|ADM97786.1| Taurine transport system permease protein tauC [Dickeya dadantii 3937] Length = 288 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 LPQ + + +L VI + + +TLA S +LG L+ +L M + L Sbjct: 83 ELPQKTAVSLGTLLKGYVIGSVLALLLSTLAV-SVQLGRDLLALLTAMLNPLPAIALLPL 141 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + + L E + +F + S +W M + Y + L R++ L+GW+ Sbjct: 142 ALLWFGL-------GEKSLVFVLVHSVMWPMALNAYSGFLGVSDTLRMAGRNYGLTGWRY 194 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P ++ + + + W ++A+E++ Sbjct: 195 VARILIPAALPAIISGLKIGWAFAWRTLIAAELV 228 >gi|46445649|ref|YP_007014.1| putative integral membrane components of the ABC transporters [Candidatus Protochlamydia amoebophila UWE25] gi|46399290|emb|CAF22739.1| putative integral membrane components of the ABC transporters [Candidatus Protochlamydia amoebophila UWE25] Length = 258 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 26/135 (19%), Positives = 67/135 (49%), Gaps = 3/135 (2%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A F + +W++ + + N+P +R+ G+ ++ + VP ++P ++ Sbjct: 119 EKAMFFIVIMGSIWSIALATDAGVKNVPPLYVRAARTLGSQGFHTWFKVIVPAALPFIIS 178 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 M + W ++A+E+ + T++ G+G+ + + + A++ M ++ V L Sbjct: 179 GMKQGWAFAWRSLMAAEIYI---TILTGFGLGNLLHYGRELHAMDAVIGVMFVIIAVGLL 235 Query: 255 YDQLLFRPMIVWSNK 269 D+++F P+ V+ ++ Sbjct: 236 VDKVVFSPLEVFMHE 250 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 41/208 (19%), Positives = 86/208 (41%), Gaps = 14/208 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T+ R++ ++ ++ IP+G+ I A L P+ + PL + + Sbjct: 59 VTLKRLIQGYLVGLLVGIPIGLLNARFQLFEDTIGFLALGLQTLPSVCWAPLAI----LW 114 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++I G+ W I AG P + A + G+ W +I+P P Sbjct: 115 FGQTEKAMFFIVIMGSIWSIALATDAGVKNVPPLYVRAARTLGSQGFHTWFKVIVPAALP 174 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTT-GLGAYIAESTEKGSFPEVVLGVLIMC 563 + ++G AW + + +E+ +I + T GLG + E + V+ + ++ Sbjct: 175 FIISGMKQGWAFAWRSLMAAEI----YITILTGFGLGNLLHYGRELHAMDAVIGVMFVII 230 Query: 564 CFVLALNRFLWHPLYLY-----GTRCLR 586 L +++ ++ PL ++ GT R Sbjct: 231 AVGLLVDKVVFSPLEVFMHEKWGTHTKR 258 >gi|327481588|gb|AEA84898.1| binding-protein dependent transport system inner membrane protein [Pseudomonas stutzeri DSM 4166] Length = 301 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 16/156 (10%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 VHSL R L A+V+ +L L +SR +L+P +++ + IP + ++ Sbjct: 105 VHSL----ERIALAYAYAVVLGVLC----GVLIGRSRWAEDILLPYIELFRPIPAVAWIP 156 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 ++ + + +F F + + + + P L +RS S Sbjct: 157 LAILMLPT--------EQSSIVFITFLGAFFPIVLNTVHGVEQTPDVLVRAARSLGASDR 208 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 W++ +P +MP +V + + M WF ++A E+I Sbjct: 209 AILWHVVIPGAMPSIVAGLAIGMGVAWFSLLAGEII 244 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 10/175 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + A ++ + G+ IG + P+ +L PA + PL + + Sbjct: 107 SLERIALAYAYAVVLGVLCGVLIGRSRWAEDILLPYIELFRPIPAVAWIPLAILMLPTEQ 166 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + G + I+ N + G P+ A S + ++++PG P Sbjct: 167 SS----IVFITFLGAFFPIVLNTVHGVEQTPDVLVRAARSLGASDRAILWHVVIPGAMPS 222 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 V G G AW + + E+ S + G+G + S +PE+++G+L Sbjct: 223 IVAGLAIGMGVAWFSLLAGEIISGQY------GIGYFTWTSYTLVKYPEIIIGML 271 >gi|313890137|ref|ZP_07823772.1| phosphate ABC transporter, permease protein PstC [Streptococcus pseudoporcinus SPIN 20026] gi|313121498|gb|EFR44602.1| phosphate ABC transporter, permease protein PstC [Streptococcus pseudoporcinus SPIN 20026] Length = 311 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 6/167 (3%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIP--ILGFL 116 +LP + + +LSA+V + + S + G L+ P ++++ IP + GF+ Sbjct: 84 ALPMISGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143 Query: 117 TFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 V+ + L+ G G L+ + +F + +TF SL +PR E S + Sbjct: 144 GLQVIVPFIRTLFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYREASMAMGA 202 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ W + + + PG+ ++ M+ + +A +M+V V+P Sbjct: 203 TRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMP 249 >gi|302340533|ref|YP_003805739.1| binding-protein-dependent transporters inner membrane component [Spirochaeta smaragdinae DSM 11293] gi|301637718|gb|ADK83145.1| binding-protein-dependent transport systems inner membrane component [Spirochaeta smaragdinae DSM 11293] Length = 240 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 24/215 (11%) Query: 24 AFVLVIG---IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 A VLVIG I++ + + T+P V IV I L Q + R+++A+ + Sbjct: 11 ALVLVIGVWGILSFIYPPLVIPTIPSVCVKIVEIMTHADML-QIILVSFTRLITALTVGT 69 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAI 139 + F L K + P++ ++Q IP + L +++F N P I + AI Sbjct: 70 IAGFAIGILCGKFTVFREITGPLIGVLQVIPPVALLILAILWFGFNGKPAIFIAS--MAI 127 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F I M S+ + NI E+ +FRL+ F + +P P S Sbjct: 128 FPI-------MVISVQHGIMNIDPKTLEMGETFRLTKRSMFLDIIIPSIRP--------S 172 Query: 200 MSGGWFFV--VASEMIVVGDTVIPLPGIGSYIALA 232 ++ GW +A + +V+G+ + GIG ++ A Sbjct: 173 LTSGWRISLGLACKTMVMGEVLTTPTGIGGALSQA 207 >gi|307727967|ref|YP_003911180.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] gi|307588492|gb|ADN61889.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] Length = 279 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 19/207 (9%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R +I + + +GI GF P + + Q++ A P PLV+ Sbjct: 81 VSLLRAASGFVIGGTLGLALGIVAGFSPLAQALLDRSIQMVRAVPFLAMLPLVIVWFGVG 140 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++L +L +F + I N + G E+A + R I+LPG P Sbjct: 141 E-TAKIFLVVLAVF---FPIYINTMLGIRQLDPKLLELARVVGLERTAIVRRIVLPGAMP 196 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL------- 557 +TG A AW A +++E + T G+G ++ E + +VL Sbjct: 197 SILTGVRYALAHAWLALVIAETLA------TTKGIGFLAMDAREFLNTNVIVLTVIVYAI 250 Query: 558 -GVLIMCCFVLALNRFL-WHPLYLYGT 582 GV+ L RFL WH Y G Sbjct: 251 IGVVADALVRLLEARFLSWHANYAKGA 277 >gi|167587279|ref|ZP_02379667.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 269 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 109 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ +R +ILPG P + G A G W IV+E S +G+G Sbjct: 165 AKSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 218 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA L R WHP Y G + Sbjct: 219 TMNAREFLQTDVVVVGILLYAVLGKVADVLAKWLERATLRWHPAYQPGAQT 269 >gi|145598908|ref|YP_001162984.1| glycine betaine transporter membrane protein [Yersinia pestis Pestoides F] gi|145210604|gb|ABP40011.1| glycine betaine/L-proline transport system permease [Yersinia pestis Pestoides F] Length = 384 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 199 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 253 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 254 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 306 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 307 VVIASMIAVG-------GLGQMVLRGIGRLDM 331 >gi|152996716|ref|YP_001341551.1| binding-protein-dependent transporter inner membrane component [Marinomonas sp. MWYL1] gi|150837640|gb|ABR71616.1| binding-protein-dependent transport systems inner membrane component [Marinomonas sp. MWYL1] Length = 263 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 14/141 (9%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +S + VL P L ++QS P++ +V P +V+ L F + S M Sbjct: 94 RSELMNRVLYPALIVIQSTPVVAVAPLIIVLLGTDDPSRVLITCLITFFPLVVSTTTGM- 152 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 P ++ E+S+S R +++ W + +P+++P + + +S++ V +E Sbjct: 153 -------LETPPEMIELSQSLRAPRYRETWQIRIPYAIPHIFSGLRVSITLAIIGAVVAE 205 Query: 212 MIVVGDTVIPLPGIGSYIALA 232 + + G+G +I + Sbjct: 206 FVAAEE------GLGYFIQFS 220 >gi|162419458|ref|YP_001607863.1| glycine betaine transporter membrane protein [Yersinia pestis Angola] gi|162352273|gb|ABX86221.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis Angola] Length = 388 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 203 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 257 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 258 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 310 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 311 VVIASMIAVG-------GLGQMVLRGIGRLDM 335 >gi|302132199|ref|ZP_07258189.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 285 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G+++ Y D LG ++ R+ + + A++ IPVGI IG P + Sbjct: 73 GWLLMTKGYMDSTLWQHLGA-SLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEF 131 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL+V + L L L IF I G A Sbjct: 132 SRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPARVRAAQ 187 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S T W+ R++I+P P +TG G W+ + +E+ + T+GLG + Sbjct: 188 SLGATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQ 241 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 + + VVLG+L++ A+ Sbjct: 242 SAAQFLVTDVVVLGILVIAIIAFAME 267 >gi|296133748|ref|YP_003640995.1| binding-protein-dependent transport systems inner membrane component [Thermincola sp. JR] gi|296032326|gb|ADG83094.1| binding-protein-dependent transport systems inner membrane component [Thermincola potens JR] Length = 233 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 14/190 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+++ ISL+ + R L L P+L +Q++P + +L +++F Sbjct: 42 RVITGYFISLVIGLTLGLTVVRVRYLDENLSPLLLGLQTLPSICWLPLAILWFG------ 95 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E + IF I +++++ + + N+P V+++ G + + + +P ++P Sbjct: 96 -IG-EDSIIFVIAIGSIFSISMAAVSGIKNVPPLYMRVAKTMGAKGLKAYTTVVIPAALP 153 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ M S W ++A EM+ P G+G + + D+ ++ M+ ++ Sbjct: 154 SIISGMKQGWSFAWRALMAGEMLS------PKDGLGYALTVGRDLADMNQVVSVMIIIIV 207 Query: 251 VIFLYDQLLF 260 + + D+L+F Sbjct: 208 LGLVIDKLIF 217 >gi|260769331|ref|ZP_05878264.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio furnissii CIP 102972] gi|260614669|gb|EEX39855.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio furnissii CIP 102972] Length = 266 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+P+L Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPLLIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPATLPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W NK Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSIALYFITDKLL-KTAIPWENK 266 >gi|229593055|ref|YP_002875174.1| putative glycine betaine/L-proline ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229364921|emb|CAY53014.1| putative glycine betaine/L-proline ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 281 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 95/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ ++ +AA ++ P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELMDAGKAFGCSRRQLLS 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273 >gi|220913559|ref|YP_002488868.1| binding-protein-dependent transporters inner membrane component [Arthrobacter chlorophenolicus A6] gi|219860437|gb|ACL40779.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter chlorophenolicus A6] Length = 320 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 22/225 (9%) Query: 50 DIVPITLDV---------HSLPQYASRTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMV 99 D+VP LDV Q A T+L R L +IS+ L A+ L Sbjct: 91 DLVPGPLDVVGQMGVLWGEGKLQEAMWTSLQRGLVGFLISVAIATPVGLLLAQVAPLRRA 150 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 P++ +Q +P + ++ +++F G A + F +F + ++ + + Sbjct: 151 FGPLISGLQVLPSVAWVPAAIIWF---------GLTDATVYFVVFMGAIPSIINGLISGV 201 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 IP V + Q + +P ++PG + + + W ++A+E+I VG T Sbjct: 202 DQIPPQFRRVGTVLGANRLQMALQVVLPAALPGYLGGLKQGWAFSWRSLMAAEIIAVGGT 261 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 + G+GS + D+ ++ A+L +LGV L + L+F P+ Sbjct: 262 IG--FGLGSLLDQGRALSDMTVVMSAILLILGVGILIELLVFAPI 304 >gi|163737049|ref|ZP_02144467.1| hypothetical protein RGBS107_02863 [Phaeobacter gallaeciensis BS107] gi|161389653|gb|EDQ14004.1| hypothetical protein RGBS107_02863 [Phaeobacter gallaeciensis BS107] Length = 283 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 18/156 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSL 158 LVP++ + IP + L V++F G + A+ +A+ + T + Y ++ Sbjct: 126 LVPLVAALFPIPKIALLPLFVIWF---------GIDEASKYALIAFGTFTPTVVATYGAV 176 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS + +P +MPG++ + +S++ +VA+EM+ Sbjct: 177 DNVDRTLIRMGQSFNLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLGAEH- 235 Query: 219 VIPLPGIGSYIALAIKEQDLLAILY--AMLTMLGVI 252 GIG+YI A DL + A+L++LGV+ Sbjct: 236 -----GIGAYILEAGSLYDLERLFAGVAILSVLGVL 266 >gi|149188568|ref|ZP_01866860.1| putative permease [Vibrio shilonii AK1] gi|148837478|gb|EDL54423.1| putative permease [Vibrio shilonii AK1] Length = 297 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 25/198 (12%) Query: 68 TTLRMLSAMVISLLFTFVYATLA-------AKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 T+R +S +++S TFV L A+S++ V+ PILDIMQ++P +L V Sbjct: 102 NTMRTMSIILVS---TFVAIALGIPTGIIMAQSKKARAVITPILDIMQTMPAFVYLIPVV 158 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 M L GK+ G I+AI V +T + + +++ E + ++ S Q+ Sbjct: 159 ---MLLGIGKIPGVIAVVIYAI--PPVIRLT---DLGIRLVDKEVLEAATAYGASPMQRL 210 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + VP +MP ++ + ++ VV + MI V G+G + +I Q Sbjct: 211 FGVQVPLAMPNIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFTL 263 Query: 241 ILYAMLTMLGVIFLYDQL 258 L L ++ + ++D++ Sbjct: 264 GLLNGLAIVALAIIFDRV 281 >gi|41407207|ref|NP_960043.1| hypothetical protein MAP1109 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464707|ref|YP_882581.1| ABC transporter permease [Mycobacterium avium 104] gi|41395558|gb|AAS03426.1| hypothetical protein MAP_1109 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165994|gb|ABK66891.1| ABC transporter permease protein [Mycobacterium avium 104] Length = 286 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 8/148 (5%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +++ LR+L+ ++ + L +SR V P+ ++ + IP + + ++ F Sbjct: 88 AQSLLRILTGFGLAAVIGVATGVLLGRSRLFADVFGPLAELARPIPAIAMVPVAILLFPT 147 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G V LAA F I S ++ +P E+ R+ WQ + + Sbjct: 148 DEAGIVFITFLAAYFPIM--------VSTRHAVRALPTLWEDSVRTLGGGRWQVLTQVVL 199 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213 P +PG+ + + M W V+++EMI Sbjct: 200 PGILPGVFGGLSVGMGVAWICVISAEMI 227 >gi|1074368|pir||F64149 nitrate transport protein nrtB homolog HI0355 - Haemophilus influenzae (strain Rd KW20) Length = 260 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + A L + SR++ VL+PIL I Q+IP+ V++F K++ + L F + Sbjct: 89 ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 146 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 T + Y L N P+ +++++F +S + + +P ++P + +++S Sbjct: 147 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 197 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259 VA VVG+ V G+G Y+ + + + +++A L +L I F D LL Sbjct: 198 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 253 Query: 260 FRPMIVWS 267 R +WS Sbjct: 254 HR--FIWS 259 >gi|22125122|ref|NP_668545.1| glycine betaine transporter membrane protein [Yersinia pestis KIM 10] gi|45442233|ref|NP_993772.1| glycine betaine transporter membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51597275|ref|YP_071466.1| glycine betaine transporter membrane protein [Yersinia pseudotuberculosis IP 32953] gi|108808368|ref|YP_652284.1| glycine betaine transporter membrane protein [Yersinia pestis Antiqua] gi|108811295|ref|YP_647062.1| glycine betaine transporter membrane protein [Yersinia pestis Nepal516] gi|149365459|ref|ZP_01887494.1| glycine betaine/L-proline transport system permease [Yersinia pestis CA88-4125] gi|153949330|ref|YP_001400041.1| glycine betaine transporter membrane protein [Yersinia pseudotuberculosis IP 31758] gi|165925220|ref|ZP_02221052.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939926|ref|ZP_02228464.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008318|ref|ZP_02229216.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212363|ref|ZP_02238398.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398795|ref|ZP_02304319.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421456|ref|ZP_02313209.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423494|ref|ZP_02315247.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468718|ref|ZP_02333422.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis FV-1] gi|170023360|ref|YP_001719865.1| glycine betaine transporter membrane protein [Yersinia pseudotuberculosis YPIII] gi|186896379|ref|YP_001873491.1| glycine betaine transporter membrane protein [Yersinia pseudotuberculosis PB1/+] gi|218929723|ref|YP_002347598.1| glycine betaine transporter membrane protein [Yersinia pestis CO92] gi|229838199|ref|ZP_04458358.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895455|ref|ZP_04510627.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898689|ref|ZP_04513834.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229901540|ref|ZP_04516662.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270489727|ref|ZP_06206801.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504445|ref|YP_003568507.1| glycine betaine/L-proline transport system permease [Yersinia pestis Z176003] gi|21957980|gb|AAM84796.1|AE013725_9 permease of high-affinity ABC transport system for glycine betaine and proline [Yersinia pestis KIM 10] gi|45437097|gb|AAS62649.1| glycine betaine/L-proline transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51590557|emb|CAH22198.1| ABC glycine/betaine/L-proline transporter, permease subunit proW [Yersinia pseudotuberculosis IP 32953] gi|108774943|gb|ABG17462.1| glycine betaine/L-proline transport system permease [Yersinia pestis Nepal516] gi|108780281|gb|ABG14339.1| glycine betaine/L-proline transport system permease [Yersinia pestis Antiqua] gi|115348334|emb|CAL21267.1| glycine betaine/L-proline transport system permease [Yersinia pestis CO92] gi|149291872|gb|EDM41946.1| glycine betaine/L-proline transport system permease [Yersinia pestis CA88-4125] gi|152960825|gb|ABS48286.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|165912145|gb|EDR30784.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922827|gb|EDR39978.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992700|gb|EDR45001.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206294|gb|EDR50774.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960945|gb|EDR56966.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051299|gb|EDR62707.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057664|gb|EDR67410.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749894|gb|ACA67412.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|186699405|gb|ACC90034.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|229681469|gb|EEO77563.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229688237|gb|EEO80308.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694565|gb|EEO84612.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701610|gb|EEO89637.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362564|gb|ACY59285.1| glycine betaine/L-proline transport system permease [Yersinia pestis D106004] gi|262366431|gb|ACY62988.1| glycine betaine/L-proline transport system permease [Yersinia pestis D182038] gi|270338231|gb|EFA49008.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294354904|gb|ADE65245.1| glycine betaine/L-proline transport system permease [Yersinia pestis Z176003] gi|320016145|gb|ADV99716.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 388 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 203 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 257 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 258 TI---LGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 310 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 311 VVIASMIAVG-------GLGQMVLRGIGRLDM 335 >gi|237802385|ref|ZP_04590846.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025242|gb|EGI05298.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 281 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T ++L A ++ ++ +AA ++ P+LD+MQ++P +L T+ Sbjct: 89 QETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRPLLDLMQTVPTFVYLIPTLTL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 149 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELLDAGKAFGSSRRQLLT 199 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P++MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 200 RIELPYAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 249 IALGFEAGLAIVLLAIMLDRICKQP 273 >gi|298529248|ref|ZP_07016651.1| binding-protein-dependent transport systems inner membrane component [Desulfonatronospira thiodismutans ASO3-1] gi|298510684|gb|EFI34587.1| binding-protein-dependent transport systems inner membrane component [Desulfonatronospira thiodismutans ASO3-1] Length = 278 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 29/165 (17%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY---QSL 158 PILD MQ++P +L + +F L + AIF + V++M ++ + Sbjct: 129 PILDFMQTLPAFVYLIPAIPFF-----------GLGKVAAIFATVVFSMPPAIRFTNLGI 177 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMIV 214 +P++L E + +F WQK + + +P + M G+ +M+++S VV + MI Sbjct: 178 RQVPKELTECADAFGADRWQKLFKIQLPLAKTTIMGGVNQTVMLALS----MVVIAAMIG 233 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G G+G + AI+ A A + ++ + + D+LL Sbjct: 234 AG-------GLGGEVWRAIQRLQPGAGFEAGIGIVILAIILDRLL 271 >gi|218676848|ref|YP_002395667.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32] gi|218325116|emb|CAV26975.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32] Length = 283 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 125 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 174 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ Y+ +P ++P L + +++ V+A VVG+ Sbjct: 175 LRNTPTGYLDLAKTMGASKWQLLRYIQLPAALPTLASGIRVAV------VIAPIGAVVGE 228 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W N+ Sbjct: 229 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFVTDKLL-KKAIPWENQ 283 >gi|145631810|ref|ZP_01787569.1| ABC transporter permease protein [Haemophilus influenzae R3021] gi|144982529|gb|EDJ90083.1| ABC transporter permease protein [Haemophilus influenzae R3021] Length = 245 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 22/188 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + A L + SR++ VL+PIL I Q+IP+ V++F K++ + L F + Sbjct: 74 ISALLLSFSRQISSVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 T + Y L N P+ +++++F +S + + +P ++P + +++S Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLL 259 VA VVG+ V G+G Y+ + + + +++A L +L I F D LL Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLL 238 Query: 260 FRPMIVWS 267 R +WS Sbjct: 239 HR--FIWS 244 >gi|133930593|gb|ABO43867.1| permease protein [Lactobacillus reuteri] Length = 207 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 20/210 (9%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP--- 420 +G I+ +F Y ++G + VV L+I + II +P+G +I S+I+P Sbjct: 2 LGQIIQYFQTNSGQYWQYVGQHIILTVVTLVI-SMIIALPLG-------YIGSRIKPVAQ 53 Query: 421 ----FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 FAQLL P+ L++ + + + L +L + +L N I G + Sbjct: 54 FCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALIALIVLAL----PPLLINTILGFNEVS 109 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTG-AITACGGAWNASIVSEVASWGHIHLR 535 +KEV + + R R I +P PY + G + +A++ + + + G L Sbjct: 110 PLYKEVGIALGMDQRRLRRQIEIPLALPYILNGIKLALVEIIASATLATYIGAGGLGTLI 169 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGLG Y G+ +L +L M F Sbjct: 170 FTGLGLYDMSYVVIGAVSVAILSLLAMISF 199 >gi|312883011|ref|ZP_07742742.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369171|gb|EFP96692.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 299 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 29/179 (16%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS + + L + + A+S R+ V+ P+LD+MQ++P +L V Sbjct: 101 EDTMRTLSIITVCTLLSIILGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVV-- 158 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + + +++ E + +F S Q+ Sbjct: 159 -MLLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAFGASAKQRLI 211 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P +MP G+ +MM++S M+V+ ++I + G+G + +I Q Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259 >gi|269794999|ref|YP_003314454.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Sanguibacter keddieii DSM 10542] gi|269097184|gb|ACZ21620.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Sanguibacter keddieii DSM 10542] Length = 322 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 11/192 (5%) Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 LG T+ RV+ +A+++ IP+G+ +G + P L P + PL + + Sbjct: 127 LGASTV-RVLSGFGLAALLAIPLGVIMGRFSLAFKMLDPTVNLTRPIPVTAWAPLTLLII 185 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 Y ++L L F + IL N I+G P E AS + +ILP Sbjct: 186 GYGD-GSAIFLVFLAAF---FPILLNTISGVRQVPVRLVEAASMLGTRSGQVLYKVILPA 241 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 V G A G +W +V E +TGLGA I ++ + +V G+++ Sbjct: 242 SMRSIVGGLRIALGLSWVILVVGETVGI------STGLGAMITQARDMSKTDLIVAGMVV 295 Query: 562 MCCFVLALNRFL 573 + +R L Sbjct: 296 IGLAGFVADRLL 307 >gi|298368917|ref|ZP_06980235.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282920|gb|EFI24407.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Neisseria sp. oral taxon 014 str. F0314] Length = 515 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 12/131 (9%) Query: 67 RTTLRMLSAMVISLLFTFVYAT-LA---AKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + TL L +I+LL A LA A RR ++ + +I+Q+IP L L + + Sbjct: 14 QATLEHLRLSLIALLCAVALAVPLAVWLADKRRWAEGVLQVTNILQTIPSLALLGLLIPF 73 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 P +I L A+ IF + Y L I ++E +F LS WQ W Sbjct: 74 VGIGSPPVLIALTLYALLPIFQN--------TYLGLSQIDPAIKEAHTAFGLSRWQALWR 125 Query: 183 LGVPFSMPGLV 193 + +P ++P ++ Sbjct: 126 IELPMALPAMI 136 >gi|317154718|ref|YP_004122766.1| binding-protein-dependent transporter inner membrane component [Desulfovibrio aespoeensis Aspo-2] gi|316944969|gb|ADU64020.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio aespoeensis Aspo-2] Length = 275 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 27/194 (13%) Query: 66 SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TTL M LS++V + A +S R L P+LD MQ+ P +L V+ F Sbjct: 90 SMTTLAMVLSSVVFCFVVGIPLGIAAGRSDRFESALRPVLDAMQTTPAFVYLVPIVMLF- 148 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G IFA+ + +T + + +L E +++F + Q + Sbjct: 149 --SVGNVAGVLATIIFAL--PPIIRLT---SLGIRGVHPELIEAAQAFGATRTQVLLRVQ 201 Query: 185 VPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 VP +MP GL +MM++S VV + +I G G+GS + L + D Sbjct: 202 VPLAMPTILAGLNQTIMMALS----MVVIAALIGAG-------GLGSPVVLGLNTLD--- 247 Query: 241 ILYAMLTMLGVIFL 254 I A++ LG++ + Sbjct: 248 IGRAVIGGLGIVLM 261 >gi|217960227|ref|YP_002338787.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus AH187] gi|217064216|gb|ACJ78466.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus AH187] Length = 278 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|30262757|ref|NP_845134.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47528078|ref|YP_019427.1| glycine betaine/L-proline ABC transporter permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49185603|ref|YP_028855.1| glycine betaine/L-proline ABC transporter permease [Bacillus anthracis str. Sterne] gi|52142725|ref|YP_084104.1| glycine betaine/L-proline ABC transporter, permease [Bacillus cereus E33L] gi|65320082|ref|ZP_00393041.1| COG4176: ABC-type proline/glycine betaine transport system, permease component [Bacillus anthracis str. A2012] gi|165868422|ref|ZP_02213082.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167637784|ref|ZP_02396063.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170685429|ref|ZP_02876653.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170704600|ref|ZP_02895066.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177649738|ref|ZP_02932740.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190565236|ref|ZP_03018156.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196043421|ref|ZP_03110659.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218903908|ref|YP_002451742.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus AH820] gi|225864762|ref|YP_002750140.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus 03BB102] gi|227814403|ref|YP_002814412.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229601264|ref|YP_002867064.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254685349|ref|ZP_05149209.1| glycine betaine/L-proline ABC transporter, permease [Bacillus anthracis str. CNEVA-9066] gi|254722757|ref|ZP_05184545.1| glycine betaine/L-proline ABC transporter, permease [Bacillus anthracis str. A1055] gi|254737805|ref|ZP_05195508.1| glycine betaine/L-proline ABC transporter, permease [Bacillus anthracis str. Western North America USA6153] gi|254752119|ref|ZP_05204156.1| glycine betaine/L-proline ABC transporter, permease [Bacillus anthracis str. Vollum] gi|254760640|ref|ZP_05212664.1| glycine betaine/L-proline ABC transporter, permease [Bacillus anthracis str. Australia 94] gi|300118748|ref|ZP_07056474.1| glycine betaine/L-proline ABC transporter, permease [Bacillus cereus SJ1] gi|301054307|ref|YP_003792518.1| glycine betaine/L-proline ABC transporter permease [Bacillus anthracis CI] gi|30257389|gb|AAP26620.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47503226|gb|AAT31902.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49179530|gb|AAT54906.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|51976194|gb|AAU17744.1| glycine betaine/L-proline ABC transporter, permease [Bacillus cereus E33L] gi|164715148|gb|EDR20665.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167514333|gb|EDR89700.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170130401|gb|EDS99262.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170670789|gb|EDT21528.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172084812|gb|EDT69870.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190563263|gb|EDV17228.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196025730|gb|EDX64399.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218538402|gb|ACK90800.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus AH820] gi|225786094|gb|ACO26311.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus 03BB102] gi|227004898|gb|ACP14641.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229265672|gb|ACQ47309.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|298723905|gb|EFI64621.1| glycine betaine/L-proline ABC transporter, permease [Bacillus cereus SJ1] gi|300376476|gb|ADK05380.1| glycine betaine/L-proline ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 278 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|167031249|ref|YP_001666480.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166857737|gb|ABY96144.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 534 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 16/207 (7%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 T P +++ + + L SLPQ + R L+ +++ + + SR + P Sbjct: 318 TSPLEVLRTLLVGLADGSLPQALLLSLQRTLTGLLLGGGAGLLAGLVLGLSRNAERLFGP 377 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L ++ + + ++ +F K + LAA F + + + + + Sbjct: 378 SLTALRQVALFAWVPLLTAWFGLGEGAKHVFVGLAAFFPLL--------IATQRGIAGLS 429 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L E +R+ RL WQ+ L +P + PG+ + +S+ W + +E + Sbjct: 430 PQLGEAARTLRLGLWQRLRLLVLPGAAPGIFAGLRLSLIYAWLGTIGAEYF--------M 481 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTML 249 P G +L I Q L + M ML Sbjct: 482 PSDGGIASLMIGAQQLFRMDQVMAAML 508 >gi|315178683|gb|ADT85597.1| hypothetical permease of ABC transporter [Vibrio furnissii NCTC 11218] Length = 280 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA + V+ PILD+MQ++P +L T+V Sbjct: 89 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWMYTVMRPILDLMQTVPTFVYLIPTLVL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P L E ++F S + + Sbjct: 149 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTRVPEALIEAGKAFGASNMKLLF 199 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 200 KVELPAALPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVIRALNTVNISQG 252 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 253 FEAGLAIVLVAIILDRLCKAP 273 >gi|86359445|ref|YP_471337.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86283547|gb|ABC92610.1| putative nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 268 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 23/183 (12%) Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 I + F P + + P P PLVV + L P + L L+ F + + Sbjct: 92 SILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGF-GLLPKILLVALVTF---FPL 147 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 L ++ G A D E+ +S + WR +R P PY+ G + A +I + Sbjct: 148 LVALLQGYEATDRDIAELLNSMKASRWRIFRLARFPSSLPYFFAGLRISITYAVVGAIFA 207 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSF-PEVVLGVLI------MCCFVLAL--NRFL-- 573 E A +GLG YI + K +F P++VL +I +C F L L RF+ Sbjct: 208 EYAG------AASGLGIYILNA--KNNFRPDLVLAAVIVSALLTLCLFALTLVIQRFVMP 259 Query: 574 WHP 576 W P Sbjct: 260 WQP 262 >gi|17549727|ref|NP_523067.1| transmembranee ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17431982|emb|CAD18659.1| probable transmembranee abc transporter protein [Ralstonia solanacearum GMI1000] Length = 298 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W + N AG + N + V ++ ++G + I++P FP +TG AW Sbjct: 173 WAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTQILIPAAFPSILTGLKIGWAFAWRTL 232 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 I SE+ + GLG YI E+ PEV G+L + L + ++ L Sbjct: 233 IASELVF--GVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 17/173 (9%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG + L M +P + L +V+F L G +I F I S VW ++ + Sbjct: 127 RLGQDFLETLTAMFNPLPAIALLPIALVWF-GLGNGSLI-------FVIVHSVVWAVSLN 178 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + ++ L V R++ LSG + +P + P ++ + + + W ++ASE++ Sbjct: 179 THAGFLSVSNTLRMVGRNYGLSGMAYLTQILIPAAFPSILTGLKIGWAFAWRTLIASELV 238 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAI---LYAMLTMLGVIFLYDQLLFRPM 263 G+G YI + ++LL I +LT++ + L + L+FR + Sbjct: 239 F--GVSSGQGGLGWYI---YENKNLLQIPEVFAGLLTVILIGLLVENLVFRTL 286 >gi|325110139|ref|YP_004271207.1| substrate-binding region of ABC-type glycine betaine transporter [Planctomyces brasiliensis DSM 5305] gi|324970407|gb|ADY61185.1| Substrate-binding region of ABC-type glycine betaine transport system [Planctomyces brasiliensis DSM 5305] Length = 502 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA----TLAAKSRRLGMVLVPILDIMQSI 110 T + +L + TT + L + ISLL V A ++A++R G +++ +I+Q+I Sbjct: 287 TRETSTLSSRLATTTAQHLWLVSISLLAAIVVAIPAGVISARNRLAGQLILGFTEIVQTI 346 Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170 P L L + F+++ G + + I A+F + + + L IP L+E + Sbjct: 347 PGLALLVLIGILFVHV--GLPMVSPWPVIVALFLYSLLPIVRNTLAGLDGIPTSLQESAA 404 Query: 171 SFRLSGWQKFWYLGVPFSMP 190 L+ W + W + +P + P Sbjct: 405 VLGLTEWNRLWRIELPLASP 424 >gi|260553009|ref|ZP_05825924.1| alkanesulfonate transporter [Acinetobacter sp. RUH2624] gi|260405251|gb|EEW98748.1| alkanesulfonate transporter [Acinetobacter sp. RUH2624] Length = 265 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 87/187 (46%), Gaps = 23/187 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR +L L ++++IP L + +++F E A +F + + + Sbjct: 95 GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPI 146 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Y + ++ L E+ +S+ LS WQ + + +P +MP ++ + ++ W Sbjct: 147 YINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV----- 201 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264 +++V +T+ GIG Y+ + +E D++ + LYA+L L + QLL R ++ Sbjct: 202 -LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERYLL 257 Query: 265 VWSNKFR 271 W ++ Sbjct: 258 RWHAGYQ 264 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + I N G + E+ Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ ++ W+ ++ IILPG P + G A G W IV+E S G+G Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578 + E V++G+L+ VLA L R+L WH Y Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHAGY 263 >gi|119952261|ref|YP_950117.1| putative ABC transporter [Arthrobacter aurescens TC1] gi|119951391|gb|ABM10301.1| putative ABC transporter [Arthrobacter aurescens TC1] Length = 257 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 10/152 (6%) Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 +P + A P V P+++ + + + ++++ I G W +L N I G A Sbjct: 92 EPVLEFFRAIPPPVLVPVLMLLMG---ITDGMKVAVI-ISGCVWPVLLNTIEGVRAIDGV 147 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 + A ++ I GW +Y++LP P + G ++SE+ + ++G Sbjct: 148 LSDSAHTYGIHGWARIKYLVLPSAGPQIMAGIRQCLSIGLILMVISEMFA------SSSG 201 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 LG I + + PE+ G++++ +AL+ Sbjct: 202 LGFTIVQFQRSFAIPEMWSGIVVLGLIGVALS 233 >gi|330821336|ref|YP_004350198.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] gi|327373331|gb|AEA64686.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] Length = 238 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + +I ++P L L + F IG ++ AI A+F + + +T + Y+ + N+P Sbjct: 82 VFNIGNTVPSLAVLAIALGIFG-------IG-DMPAIVALFLASLLPITRNAYEGMRNVP 133 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 L E +R ++ WQ + +P ++P +V + +++ Sbjct: 134 ASLREAARGIGMTPWQSLTRVELPNALPIIVGGVRTALA 172 >gi|296161510|ref|ZP_06844316.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295888325|gb|EFG68137.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 275 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 8/111 (7%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +L ++++IP + + VV+F IG EL+ + I + + M S Y ++ I Sbjct: 118 VLQMLRTIPFIALVPIFVVWFG-------IG-ELSKVALIVGAAISPMYLSTYHAIRGID 169 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L E+ R+FRL+ + + +P ++PG++ + S + +VA+E I Sbjct: 170 PKLLELGRTFRLTRGHQIRLIILPTALPGILVGVRYSAAISLLALVAAEQI 220 >gi|320527072|ref|ZP_08028261.1| ABC transporter, permease protein [Solobacterium moorei F0204] gi|320132657|gb|EFW25198.1| ABC transporter, permease protein [Solobacterium moorei F0204] Length = 256 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 12/119 (10%) Query: 415 SSKIQPFAQLLA-------AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 ++K F QLLA + P F LV+ V L+ + +S LM+F + N Sbjct: 85 AAKYNWFKQLLAPLVFTVKSIPVASFIILVLIWVHSAQLS--IVISFLMVFPIFYE---N 139 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 V G + + E+A F ++ + RYI I PY+ + A G AW + I +EV Sbjct: 140 VRKGIEMYNHQLLEMADVFELSNFARIRYIYTSSILPYFQSACSLALGLAWKSGIAAEV 198 >gi|167632060|ref|ZP_02390387.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|254743021|ref|ZP_05200706.1| glycine betaine/L-proline ABC transporter, permease [Bacillus anthracis str. Kruger B] gi|167532358|gb|EDR94994.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus anthracis str. A0442] Length = 278 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|88807960|ref|ZP_01123471.1| ABC transporter, glycine betaine/proline family, membrane component [Synechococcus sp. WH 7805] gi|88787999|gb|EAR19155.1| ABC transporter, glycine betaine/proline family, membrane component [Synechococcus sp. WH 7805] Length = 298 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 22/149 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++A +++L+ L+A+ R + ++ P LD+MQ++P +L V+ F Sbjct: 101 VITASLLALVIGLPLGILSARYRSVWRLVRPCLDLMQTMPAFVYLIPAVMLFST------ 154 Query: 132 IGAELAAIFAIFTSQVWNM--TFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 A+ +I + +++M + Q L +P DL E RSF S Q W + +P + Sbjct: 155 -----GAVPSILATLIFSMPPVVRLTQLGLSQVPADLIEAGRSFGCSERQLLWKVQMPSA 209 Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMI 213 +P G+ +M+++S VV + MI Sbjct: 210 LPTVMTGVNQTIMLALS----MVVIASMI 234 >gi|126640140|ref|YP_001083124.1| alkanesulfonate transport protein [Acinetobacter baumannii ATCC 17978] Length = 178 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 19/184 (10%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G+ G S+ + Q++ PA PLV+ ++ ++ L L+ + G + Sbjct: 3 LGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFP 58 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I N G + E+ S+ ++ W+ ++ IILPG P + G A G W IV Sbjct: 59 IYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIV 118 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--W 574 +E S G+G + E V++G+L+ VLA L R+L W Sbjct: 119 AETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRW 172 Query: 575 HPLY 578 H Y Sbjct: 173 HAGY 176 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 42/189 (22%), Positives = 88/189 (46%), Gaps = 23/189 (12%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L SR +L L ++++IP L + +++F E A +F + + Sbjct: 6 LNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFF 57 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + Y + ++ L E+ +S+ LS WQ + + +P +MP ++ + ++ W Sbjct: 58 PIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV--- 114 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRP 262 +++V +T+ GIG Y+ + +E D++ + LYA+L L + QLL R Sbjct: 115 ---LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERY 168 Query: 263 MIVWSNKFR 271 ++ W ++ Sbjct: 169 LLRWHAGYQ 177 >gi|77461633|ref|YP_351140.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77385636|gb|ABA77149.1| putative aliphatic sulfonates ABC transport system, permease protein [Pseudomonas fluorescens Pf0-1] Length = 260 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 29/132 (21%), Positives = 65/132 (49%), Gaps = 15/132 (11%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 97 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 148 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ FW + +P ++P ++ + ++ W ++V +T+ Sbjct: 149 ALVEMARSYGLSGFSLFWQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 202 Query: 224 GIGSYIALAIKE 235 GIG Y+A+ +E Sbjct: 203 GIG-YLAMNARE 213 >gi|325290913|ref|YP_004267094.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324966314|gb|ADY57093.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 256 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 11/188 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVG-IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 I++ RV V ++ + + +P+G I G P +S ++P L++ P + FP+ V Sbjct: 62 AISLKRVFVGFLLGTFLSLPLGFILAGALPWLSRFLRPLTVFLSSIPPFILFPIFVIISG 121 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + ++ + + W ILF I G A S + + + + ++LPG Sbjct: 122 IGEGG----IYTVIFWSSFWPILFTTIVGIENVDPLLVRAAKSMNASKLQIFYKVVLPGA 177 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG T ++ I +E S G +GLG I + G + LG +++ Sbjct: 178 SPTIITGVRTGLTMSFFMLIGAE--SMGA----DSGLGWVIHNAQNMGFVERIYLGAILV 231 Query: 563 CCFVLALN 570 L LN Sbjct: 232 AGVGLLLN 239 >gi|308186889|ref|YP_003931020.1| ABC transport system, permease component [Pantoea vagans C9-1] gi|308057399|gb|ADO09571.1| Putative ABC transport system, permease component [Pantoea vagans C9-1] Length = 215 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + PILG T T+ F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPILGIATVVLTIPTIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 N+P L E R ++ WQ+ ++ +P ++P Sbjct: 109 ENLPDGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|304395966|ref|ZP_07377848.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] gi|304356335|gb|EFM20700.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] Length = 215 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + PILG T T+ F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPILGIATVVLTIPTIALFGLMIPVFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 N+P L E R ++ WQ+ ++ +P ++P Sbjct: 109 ENLPDGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|229551749|ref|ZP_04440474.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229314880|gb|EEN80853.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 308 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 6/170 (3%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIP--IL 113 +V +LP + LSA+V + + S + G VL P+++++ IP + Sbjct: 80 EVGALPMIVGSFGVTFLSAIVATPFAVGAGIFMTEISHKWGQKVLQPVIELLVGIPSVVY 139 Query: 114 GFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 GF+ +V+ + +++ G G LA F +F + +T +L +PR E S + Sbjct: 140 GFIGLSVIVPFIRHIFGGTGFGI-LAGTFVLFVMILPTVTSMTVDALKAVPRHYREASLA 198 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ + + + ++PG++ ++ M+ + +A +M++ ++P Sbjct: 199 LGATRWQTTYRVVLRAAIPGILTGIVFGMARAFGEALAVQMVIGNAALLP 248 >gi|206579848|ref|YP_002240248.1| ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290509981|ref|ZP_06549351.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp. 1_1_55] gi|206568906|gb|ACI10682.1| ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289776697|gb|EFD84695.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp. 1_1_55] Length = 247 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 10/166 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RV V + +A I+ IP G+ +G P Q L + P+ V + Sbjct: 59 AISLSRVAVGLGLALIVGIPCGLLMGCSAASERLAMPALQFLRMISPLSWMPVAVMLLGI 118 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +W L+ F W +L N +G P + +A S T +IILPG+ Sbjct: 119 G--DRPIWF--LLSFAAVWPVLLNTASGVRQLPPGWLLLARSLSATRRETLWHIILPGVR 174 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 + +TG A G W + E+ ++GLG I ++ ++ Sbjct: 175 AHILTGVRLAIGILWIVLVPCEMLG------VSSGLGYAILDARDR 214 >gi|153008918|ref|YP_001370133.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum anthropi ATCC 49188] gi|151560806|gb|ABS14304.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum anthropi ATCC 49188] Length = 278 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA L + P+LD+MQ++P +L +V+F + + PG LA + + V Sbjct: 118 AAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL-----LATAIFVLPAPV- 171 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T + + + P L E +F S Q W + +P++MP GL +M+S+S Sbjct: 172 RLT---HLGISSTPSSLIEAGEAFGASRSQLLWKIELPYAMPQILAGLTQTIMLSLS 225 >gi|78355721|ref|YP_387170.1| glycine/betaine/L-proline ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218126|gb|ABB37475.1| glycine/betaine/L-proline ABC transporter, permease protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 279 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 23/194 (11%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A ++++L AA ++ ++P+LD+MQ++P +L + +F Sbjct: 97 VLVATLLAVLIGLPLGVFAAINKVAYRAIMPVLDVMQTMPAFVYLIPAIPFF-------- 148 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLC----NIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 L + AIF++ V+ M + + C +P +L E + +F + WQ+ L +P Sbjct: 149 ---GLGKVAAIFSTVVFAMP-PVIRLTCLGIRQVPVELVECAEAFGTNRWQRLRKLELPL 204 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + P ++ + ++ ++A M+V+ +I G+G + AI+ ++ A + Sbjct: 205 AAPTIMAGVNQTV------MLALSMVVIA-AMIGAKGLGGEVWKAIQRLEMGRGFEAGIG 257 Query: 248 MLGVIFLYDQLLFR 261 ++ V D+LL + Sbjct: 258 IVIVAICLDRLLQK 271 >gi|308067985|ref|YP_003869590.1| glycine/betaine-binding protein precursor [Paenibacillus polymyxa E681] gi|305857264|gb|ADM69052.1| Glycine betaine-binding protein precursor [Paenibacillus polymyxa E681] Length = 618 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 107/234 (45%), Gaps = 30/234 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI-FTSQVW 148 A S+ ++ P+LD MQ++P +L V +F + + PG + + IFAI T ++ Sbjct: 114 AYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSLGVVPGVI----ASVIFAIPPTIRMT 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 N+ + + +L E S +F + QK + + +P ++P G+ +M+S+S Sbjct: 170 NL------GIMQVSGELIEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLS--- 220 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFR 261 M+V+ ++I GIG+ + A+ + + A L ++ + + D Q LF+ Sbjct: 221 -------MVVIA-SMIGAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNLFK 272 Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 P + ++ I A + V+ + + + +S+ + +N V + Sbjct: 273 PTQKGKGRVSSKQKVWITSAVTAVILIAGASQYFVGTDHSASGKGNAAANPVGE 326 >gi|303246777|ref|ZP_07333054.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio fructosovorans JJ] gi|302491794|gb|EFL51674.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio fructosovorans JJ] Length = 254 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 6/107 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL + GA A P F+ A+++ ++ + ++LP P G TA A +++ Sbjct: 131 ILVGAMDGARAVPPQFRLTAAAYGLSRFDTLARVMLPAAGPSVAAGFRTAVPMALIVAVL 190 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 SE+ T+G+G YI + PE+ GV ++ L LN Sbjct: 191 SEMIGA------TSGIGHYILRMQRTFAIPEMYAGVAMLGILGLGLN 231 >gi|298247631|ref|ZP_06971436.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] gi|297550290|gb|EFH84156.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] Length = 290 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%) Query: 107 MQSIPILGFLTFTVVYFMNLYP---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +Q+IP + L V F++L K++G I T + T+ + L NIP Sbjct: 118 LQAIPSIMLLLPLFVLFISLQSFLQVKLVGTYTGVIITYLTFSLPFATWLLVTYLANIPL 177 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 D+EE + + Q W + VP ++PGLV ++ S GW V+ + ++ +T Sbjct: 178 DVEEAAMIDGATRLQTLWRIIVPLALPGLVVALVFSFLTGWNDVLFASVLTSPET 232 >gi|326940556|gb|AEA16452.1| glycine betaine transport system permease protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 278 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|206973541|ref|ZP_03234459.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus H3081.97] gi|222096288|ref|YP_002530345.1| glycine betaine/l-proline ABC transporter , permease [Bacillus cereus Q1] gi|206747697|gb|EDZ59086.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus H3081.97] gi|221240346|gb|ACM13056.1| glycine betaine/L-proline ABC transporter, permease [Bacillus cereus Q1] Length = 278 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|161520581|ref|YP_001584008.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189353231|ref|YP_001948858.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160344631|gb|ABX17716.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189337253|dbj|BAG46322.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 287 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 43/214 (20%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61 PP +RR + + L + ++ G++ +P ++V D + Sbjct: 21 PPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDTLARMGAARV 80 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 ++ + LR+ + I V SRR+ +L P +++IP L ++ ++ Sbjct: 81 ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + K+ L AI A F + ++ + N+ R L E+ +RL F Sbjct: 141 WLGIDEAPKIT---LIAIGAFFP-----VHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + ++P +V + +S W F+VA+E+I Sbjct: 193 RILLRAALPQIVTGLRTGLSLAWMFMVAAELIAA 226 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 25/178 (14%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV I + + + VG +G I + ++P Q L A P+ + P+++ Sbjct: 87 SALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLL------- 139 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + L+ G + + V+AG E+ + + + +R I+ Sbjct: 140 ----LWLGIDEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFRRIL 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 L P VTG T AW + +E+ + T GLG +++ E G P++V Sbjct: 196 LRAALPQIVTGLRTGLSLAWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 246 >gi|152975672|ref|YP_001375189.1| binding-protein-dependent transport systems inner membrane component [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024424|gb|ABS22194.1| binding-protein-dependent transport systems inner membrane component [Bacillus cytotoxicus NVH 391-98] Length = 279 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAADAFGSTASQKLFKVQLPLATGTIMAGINQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|317404024|gb|EFV84483.1| alkanesulfonate transporter [Achromobacter xylosoxidans C54] Length = 260 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ P PLV+ ++ + L+LL + G + + N G + E+ Sbjct: 103 QMIRNIPVLALIPLVIL---WFGIEETAKLALLSL-GVFFPVYLNTFHGIRSVDPALIEM 158 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 S+ +TGWR +R +ILPG P + G A G W IV+E S Sbjct: 159 GRSYGLTGWRLYRDVILPGALPSTLVGLRFALGLVWVILIVTETIS 204 >gi|225181346|ref|ZP_03734790.1| binding-protein-dependent transport systems inner membrane component [Dethiobacter alkaliphilus AHT 1] gi|225167927|gb|EEG76734.1| binding-protein-dependent transport systems inner membrane component [Dethiobacter alkaliphilus AHT 1] Length = 280 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A ISL+ A+S R+ + P+LD+MQ++P +L V++F Sbjct: 95 VLVATFISLVIGIPLGIACARSNRINSYVTPVLDLMQTMPAFVYLIPAVMFFR------- 147 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +G+ + AI A F V + +P +L E + SF + QK + +P ++P Sbjct: 148 VGS-VPAIVATFIFSVPPTIRLTNLGIRQVPTELIEAADSFGATPRQKLIKVQLPLALP 205 >gi|114778546|ref|ZP_01453373.1| abc transporter, permease protein [Mariprofundus ferrooxydans PV-1] gi|114551135|gb|EAU53695.1| abc transporter, permease protein [Mariprofundus ferrooxydans PV-1] Length = 262 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 34/186 (18%), Positives = 81/186 (43%), Gaps = 15/186 (8%) Query: 360 AWQSIGYIVNHFTYQDVLY----VIWLGCIT-MFRVVVLIIIASIIWIPVGIWIGFRPHI 414 ++ SIG + F ++ ++W+ + + R+ + + ++++I VG+ G P++ Sbjct: 36 SFSSIGEAIQRFAFEPSKRTGEILLWVDTASSLSRLAMGVGVSAVIGFFVGVACGVVPYV 95 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 + + PF ++L+ P P++ ++ +L++ G +I +V Sbjct: 96 RANLSPFVRVLSMVPPIALLPILFIVFGLGEVSK----VVLIVLGIAPFIARDVQQRVEE 151 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P++ A + + W+ +++P + P + + G AW I +E + Sbjct: 152 LPHEQMIKAQTLGASTWQIIIRVVIPQVMPRLLNAVRLSLGPAWLFLIAAEAIA------ 205 Query: 535 RTTGLG 540 T GLG Sbjct: 206 STDGLG 211 >gi|15891014|ref|NP_356686.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15159339|gb|AAK89471.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 282 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 85/185 (45%), Gaps = 15/185 (8%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A +++LL +A ++ L VL PILD++Q++P +L + + P Sbjct: 100 TATILALLVGIPLGIIAGFTKSLDRVLEPILDLIQTMPPYIYL-LPAIALLGYGPATA-- 156 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 L A F + +T + PR+ E+ + L+ WQ F + +PF++P ++ Sbjct: 157 --LIATFIVAMPPAIRLT---SLGIRMTPREFIELGHASGLTPWQMFMKIRLPFAIPSVM 211 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + S+ + VV + ++ G G+G I A++ D+ + A + ++ + Sbjct: 212 AGINQSLMMAFGMVVIAGIVGSG-------GLGETIYGAVRTLDIATSINAAIAIVILTM 264 Query: 254 LYDQL 258 + D+L Sbjct: 265 VLDRL 269 >gi|307727160|ref|YP_003910373.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] gi|307587685|gb|ADN61082.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] Length = 295 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L ++ F FV +LA S R+G L+ +L M +P + L +++F L G Sbjct: 102 LLRGYLLGAAFAFVLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPIALLWF-GLGTGS 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + S +W + + Y ++P L R++ L+G + + VP ++P Sbjct: 160 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGVRHVLLILVPAALP 212 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 213 SILAGLRVGWAFAWRTLIAAELV 235 >gi|254502931|ref|ZP_05115082.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222439002|gb|EEE45681.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 263 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + T +++A V+ + A + R + P+LD+MQ+IP +L ++ Sbjct: 74 EETTETLALVIAASVVCMAVGIPIGVYGAHNPRFFAAMRPVLDLMQTIPTFVYLIPALIL 133 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + A I +Q+ + + P L E +F + Q W Sbjct: 134 FGLGMVPGLIATVIFAIPAPIRLTQL---------GVSSTPTALLEAGEAFGATKSQLLW 184 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P+++P GL +M+S+S Sbjct: 185 KIELPYALPQIMAGLTQTIMLSLS 208 >gi|328468887|gb|EGF39847.1| glycine betaine/L-proline transport system permease [Vibrio parahaemolyticus 10329] Length = 361 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+ + PILD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 165 ARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 219 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P +L E SF + Q + + +P ++P G+ +M+S+S Sbjct: 220 TILGIQQ---VPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 272 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 273 VVIASMIAVG-------GLGQMVLRGIGRLDM 297 >gi|261821087|ref|YP_003259193.1| binding-protein-dependent transporters inner membrane component [Pectobacterium wasabiae WPP163] gi|261605100|gb|ACX87586.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium wasabiae WPP163] Length = 257 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 28/166 (16%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R + +A I+ +P+G+ +G P I++ PF Q L P PL V Sbjct: 63 AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAV----- 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494 +WL + ++++++F +V+ GA A + + VA + + + + Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVDRVERSRIRVAQTLGASPRQIF 169 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +++LP P T A G W + I +E+ + T+G+G Sbjct: 170 LHVVLPDTLPELFTTVRLAIGVGWTSLIAAEMVA------ATSGIG 209 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL ++ + + R LSA ++++ L S + V P + ++ +P + + Sbjct: 57 SLWEHIAVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLA 116 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 VV+ IG E + F IF + ++ ++ + R V+++ S Q Sbjct: 117 VVWLG-------IG-EASKFFLIFIATFLSVVVGACAAVDRVERSRIRVAQTLGASPRQI 168 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 F ++ +P ++P L + +++ GW ++A+EM+ Sbjct: 169 FLHVVLPDTLPELFTTVRLAIGVGWTSLIAAEMV 202 >gi|118478145|ref|YP_895296.1| glycine betaine/L-proline ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|118417370|gb|ABK85789.1| glycine betaine/L-proline ABC transporter, permease [Bacillus thuringiensis str. Al Hakam] Length = 278 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|49479143|ref|YP_036874.1| glycine betaine/L-proline ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330699|gb|AAT61345.1| glycine betaine/L-proline ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 278 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|78060617|ref|YP_367192.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965167|gb|ABB06548.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] Length = 284 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 9/172 (5%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P +I+D + L V + ++ +TLR+ + V SRR+ + P Sbjct: 61 APSEILDTL-ARLGVTRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPT 119 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +++IP L ++ +++ K+ + A F + ++ + ++ R Sbjct: 120 FQALRAIPSLAWVPVLLLWLGIDEAPKITLIAIGAFFPVH--------LAVVAGIRDVDR 171 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 L E+ +RL F + +P ++P +V + +S W F+VA+E+I Sbjct: 172 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 223 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 25/160 (15%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456 VG +G I + +P Q L A P+ + P+++ LWL + L+ Sbjct: 102 VGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 150 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 G + + V+AG E+ + + + +R I+LP P VTG T Sbjct: 151 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 210 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 AW + +E+ + T GLG +++ E G P++V Sbjct: 211 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 243 >gi|260575135|ref|ZP_05843136.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sp. SW2] gi|259022757|gb|EEW26052.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sp. SW2] Length = 655 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 23/188 (12%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+ I ++ V A S R + P+LD+MQ++P +L +++ P Sbjct: 153 AVPIGVMGGLVLGVAAYLSPRFDRLQSPVLDLMQTVPTFAYL-VPILFLFGFGP------ 205 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 +AA+ A + M +L +IP ++ + +R +GWQ+ + +P ++P L+ Sbjct: 206 -VAALLATVIYAMPPMVRITTLALRSIPPEINDFARMVGCTGWQRLRKVLLPAALPDLMV 264 Query: 195 N----MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 +M+S++ V+ + MI G G+G + A++ D+ A + A L + Sbjct: 265 GVNQVIMLSLN----MVIIASMIGAG-------GLGFDVLNALRRLDIGAGVEAGLAITA 313 Query: 251 VIFLYDQL 258 + D+L Sbjct: 314 LAVALDRL 321 >gi|218897809|ref|YP_002446220.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus G9842] gi|218544027|gb|ACK96421.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus G9842] Length = 278 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|163757527|ref|ZP_02164616.1| taurine ABC transporter, permease protein [Hoeflea phototrophica DFL-43] gi|162285029|gb|EDQ35311.1| taurine ABC transporter, permease protein [Hoeflea phototrophica DFL-43] Length = 422 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++ SII IP+G +G P + + P PL++ ++ Sbjct: 231 SLGRVIAGFLLGSIIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLIII---WFG 287 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + +L+ W + AG S A S + W+ R++ILP P Sbjct: 288 IGEEGKV-ILLFLAALWIMTIAARAGVSGVRISKVHAAYSLGASKWQILRHVILPNSLPE 346 Query: 506 YVTGAITACGGAWNASIVSEV 526 TGA A G W + +E+ Sbjct: 347 IFTGARVAMGVCWGTVVAAEL 367 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 8/114 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F GKVI +F + +W MT + + + Sbjct: 265 PIVEFMRPVPPLALIPLIIIWFGIGEEGKVI--------LLFLAALWIMTIAARAGVSGV 316 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + S S WQ ++ +P S+P + ++M W VVA+E++ Sbjct: 317 RISKVHAAYSLGASKWQILRHVILPNSLPEIFTGARVAMGVCWGTVVAAELVAA 370 >gi|47060338|ref|NP_665793.2| ANL55 [Synechococcus elongatus PCC 7942] gi|81230349|ref|YP_398727.1| sulfonate ABC transporter, permease protein, putative [Synechococcus elongatus PCC 7942] gi|5823450|gb|AAD53164.1|AF176824_7 cytoplasmic membrane protein SrpM [Synechococcus elongatus PCC 7942] gi|47059669|gb|AAM81180.2| ANL55 [Synechococcus elongatus PCC 7942] gi|81170321|gb|ABB58659.1| sulfonate ABC transporter, permease protein, putative [Synechococcus elongatus PCC 7942] Length = 266 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 16/197 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V ++ A + +PVG+ G P I Q + + P+ V Sbjct: 78 SLQRVAVGLLAAIAVGVPVGLLFGLVPMIERSASGALQFIRMISPLSWMPIAVMAFGIGD 137 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L + L+ W IL + +G +A + +A S T R I++P I P Sbjct: 138 LP----VYFLLAIAAVWPILLSTSSGTAAVNHKLLLLARSLCATRSETIRRIVIPAIVPQ 193 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE---VVLGVLIM 562 + G A G W + +E+ ++GLG +I ++ ++ ++ E V+L + I+ Sbjct: 194 ILVGVRLAIGTIWIVLVPAEMLG------VSSGLGYFILDTRDRIAYNELTAVLLAIGII 247 Query: 563 CCFVLALNRFL---WHP 576 C + +FL W P Sbjct: 248 GCALDWSLQFLQKYWQP 264 >gi|229541806|ref|ZP_04430866.1| binding-protein-dependent transport systems inner membrane component [Bacillus coagulans 36D1] gi|229326226|gb|EEN91901.1| binding-protein-dependent transport systems inner membrane component [Bacillus coagulans 36D1] Length = 217 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 8/108 (7%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 K RR +++ I ++Q+ P L L F + F IG +L AI A+F V + Sbjct: 46 KYRRAANIVMGIAGVIQTFPSLAILAFFIPIFG-------IG-KLPAIAALFFYSVLPIL 97 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + Y + I L E R ++GW++ +L +P ++P ++ + +S Sbjct: 98 RNTYTGVKGIDPKLVEAGRGMGMTGWERVIHLELPLAIPVIMAGIRLS 145 >gi|28898501|ref|NP_798106.1| glycine betaine/L-proline transport system permease [Vibrio parahaemolyticus RIMD 2210633] gi|153836267|ref|ZP_01988934.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AQ3810] gi|260365056|ref|ZP_05777627.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus K5030] gi|260879548|ref|ZP_05891903.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AN-5034] gi|260894977|ref|ZP_05903473.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus Peru-466] gi|260901013|ref|ZP_05909408.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AQ4037] gi|28806719|dbj|BAC59990.1| glycine betaine/L-proline transport system permease [Vibrio parahaemolyticus RIMD 2210633] gi|149750542|gb|EDM61287.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AQ3810] gi|308086053|gb|EFO35748.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus Peru-466] gi|308093320|gb|EFO43015.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AN-5034] gi|308110813|gb|EFO48353.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AQ4037] gi|308111687|gb|EFO49227.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus K5030] Length = 361 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S+ + PILD MQ+ P +L V+ F G V G + IFA+ V + Sbjct: 165 ARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPVVRL 219 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T Q +P +L E SF + Q + + +P ++P G+ +M+S+S Sbjct: 220 TILGIQQ---VPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLS----M 272 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 273 VVIASMIAVG-------GLGQMVLRGIGRLDM 297 >gi|226312298|ref|YP_002772192.1| sulfonate ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226095246|dbj|BAH43688.1| putative sulfonate ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 251 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%) Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ V+FPL + ++ LN + + ++ G W + N +G P ++ VA Sbjct: 97 LQSIPSIVWFPL---AIIWFGLN-DFSILFIVTIGATWTMTVNATSGFKNVPPLYQRVAK 152 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 ++ TG+ + R +ILP P ++G A +W A Sbjct: 153 TYGSTGFHFVRTVILPASVPQIISGLRIAWAFSWRA 188 >gi|104779498|ref|YP_605996.1| taurine ABC transporter permease [Pseudomonas entomophila L48] gi|95108485|emb|CAK13179.1| taurine ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 279 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 10/169 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVG+ IG+ + P + P + PL+V L+ + L L IF Sbjct: 103 IPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGELS-KVLLIYLAIFAP- 160 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 I G A S T + R++ILP P +TG G W+ Sbjct: 161 --IAIATATGVRTVDPAKLRAAQSLGATQAQLIRHVILPSALPDILTGIRIGLGVGWSTL 218 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ + T+GLG + + + VVLG+L++ AL Sbjct: 219 VAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIALIAFALE 261 >gi|30020911|ref|NP_832542.1| glycine betaine transport system permease protein [Bacillus cereus ATCC 14579] gi|218232077|ref|YP_002367503.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus B4264] gi|29896464|gb|AAP09743.1| Glycine betaine transport system permease protein [Bacillus cereus ATCC 14579] gi|218160034|gb|ACK60026.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus B4264] Length = 278 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 35/180 (19%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPTIR 170 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 171 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 220 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 S+S +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 221 SLS-----------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|323945547|gb|EGB41601.1| inner membrane transport system [Escherichia coli H120] Length = 226 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 4/124 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 83 SLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPE 198 Query: 506 YVTG 509 +TG Sbjct: 199 ILTG 202 >gi|295111098|emb|CBL27848.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synergistetes bacterium SGP1] Length = 278 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 30/220 (13%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV------ 437 ++ RV ++A + +P+G+ +G+ ++ + A L P + PLV Sbjct: 63 TVSFVRVFGGYLLAVFVAVPLGLAMGYWNWLNRMLGLMAGLFRPIPPLSWIPLVLAWFGV 122 Query: 438 --------VSCVSYYHLNPNLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFH 487 + ++Y N+ +S+L I G + IL N I G + + Sbjct: 123 ASMATILGIEEGAWYPFFSNIKISMLFIIFIGAFFPILVNTIGGVQSVRVTLIDAVRVLG 182 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG-----AY 542 + W+ RY+ILP P TG G AW + +E+ G I +G+G AY Sbjct: 183 ASPWQVVRYVILPYAAPQVFTGLRVGLGVAWMCLVSAEMMP-GSI----SGVGYLITHAY 237 Query: 543 IAESTE---KGSFPEVVLGVLIMCCFVLALNR-FLWHPLY 578 T+ G V+G+LI F+L R F W LY Sbjct: 238 TVAQTDVVIAGMIAIGVMGILIDSLFILIERRAFQWQSLY 277 >gi|239832460|ref|ZP_04680789.1| choline ABC transporter, permease protein [Ochrobactrum intermedium LMG 3301] gi|239824727|gb|EEQ96295.1| choline ABC transporter, permease protein [Ochrobactrum intermedium LMG 3301] Length = 278 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA L + P+LD+MQ++P +L +V+F + + PG LA + + + + Sbjct: 118 AAHRPALYAAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL-----LATVIFVIPAPIR 172 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 + + P L E +F S Q W + +P++MP GL +M+S+S Sbjct: 173 LTQLGISST----PSSLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225 >gi|104782479|ref|YP_608977.1| ABC transporter permease [Pseudomonas entomophila L48] gi|95111466|emb|CAK16186.1| putative ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 248 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 22/114 (19%), Positives = 53/114 (46%), Gaps = 8/114 (7%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 ++ P+ ++ +P+LG++ ++ N K++ LAA + M + ++ L Sbjct: 87 LIAPLFHALRQVPMLGWIPLIALWLGNGEAAKLLIVSLAAFYP--------MVLNTFEGL 138 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + EV + L WQ+ + +P ++P + ++ +++ W V SE+ Sbjct: 139 RQVDTRHREVGQVLALDRWQQLRLVLLPAALPSIATGVLQALAFAWVTAVGSEL 192 >gi|42781872|ref|NP_979119.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42737796|gb|AAS41727.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 278 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|262376493|ref|ZP_06069722.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145] gi|262308632|gb|EEY89766.1| nitrate ABC transporter, permease [Acinetobacter lwoffii SH145] Length = 314 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 19/190 (10%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S++ IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 132 ISSLVGIPLGILCGFSNKISQLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + ++ ++++P P G Sbjct: 189 VI-GTLFQQILIIANTTRLVDRSLIEAGFTLGTNKFKSLLHVVIPAALPEIYRNLRVLLG 247 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-----VLGVLIMCCFV---- 566 AW IV+E+ T+G+ +I + +F V ++GV+ + C V Sbjct: 248 WAWTYLIVAELIG------STSGITWFITQQARYQNFDNVFAAILIIGVIGLLCDVILMK 301 Query: 567 LALNRFLWHP 576 L F W P Sbjct: 302 LGQRLFKWKP 311 >gi|190149839|ref|YP_001968364.1| ABC transporter permease [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307245387|ref|ZP_07527475.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249732|ref|ZP_07531711.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307254342|ref|ZP_07536180.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258800|ref|ZP_07540532.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260979|ref|ZP_07542661.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263161|ref|ZP_07544782.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914970|gb|ACE61222.1| putative ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306853728|gb|EFM85945.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858240|gb|EFM90317.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306862641|gb|EFM94597.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867151|gb|EFM99007.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869281|gb|EFN01076.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871523|gb|EFN03246.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 249 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 20/204 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ T + +++ + + L + A + S+ L L+P+L I Q+IP+ F + Sbjct: 52 QHGQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPV-----FAIAP 106 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + L+ G + +++A I V T + Y L N P+ E++++ + Sbjct: 107 LLVLWLGYGMASKIAMTVLIIYFPV---TAACYDGLRNTPKAYLELAKTLEIKPLAMLLL 163 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P L + +++S VA VVG+ V G+G Y+ L + +L Sbjct: 164 VRLPAALPALASGLRIAVS------VAPIGAVVGEWVGSSQGLG-YLMLHANARMQTDLL 216 Query: 243 YAMLTMLGVI-----FLYDQLLFR 261 +A LT+L ++ F+ D+LL R Sbjct: 217 FAALTVLLLMTLCLYFITDRLLRR 240 >gi|158424093|ref|YP_001525385.1| ABC transporter [Azorhizobium caulinodans ORS 571] gi|158330982|dbj|BAF88467.1| ABC transporter [Azorhizobium caulinodans ORS 571] Length = 246 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T + V +++++ I +G+ +G + +P L + P +PLV+ + Sbjct: 59 TFYAFAVAVVLSTAAGITLGVLLGMKRLAGEVAEPILVNLYSLPKVTLYPLVLLI---FG 115 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L + ++ ++ G LF + A P ++ A+ +T W+ +ILP I P Sbjct: 116 LGISARIAFGIMHGLIPLTLFTMNAILQLKP-VYRRSAAVMGLTSWQTAVSVILPAILPQ 174 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TGA S+ G + GLG + + E+G P V+ L++ Sbjct: 175 VITGA------RLGVSLCLLGVLIGEMFASRNGLGYMVTHAMERGDMPTVLAVALLIAIV 228 Query: 566 VLALNRFL 573 L N L Sbjct: 229 ALVANGLL 236 >gi|94311158|ref|YP_584368.1| binding-protein-dependent transport systems inner membrane component [Cupriavidus metallidurans CH34] gi|93355010|gb|ABF09099.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Cupriavidus metallidurans CH34] Length = 347 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+G + P+L ++ +P L T +F + Y AA+F I + + + Sbjct: 178 SRRIGYWIHPVLRVLGPLPSTALLPLTFYFFPSSYS--------AAVFLIALATAFPVAV 229 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + + + +V+R+ SGW + +P ++P + + M + + +V +EM Sbjct: 230 LTWSGVAGVNKSYYDVARTMGASGWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVTAEM 289 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + V G+G Y+ A + +YA L ++ ++F Sbjct: 290 MGVKS------GLGWYLTWAQGWASYVN-MYAALIVMALLF 323 >gi|297623965|ref|YP_003705399.1| binding-protein-dependent transport systems inner membrane component [Truepera radiovictrix DSM 17093] gi|297165145|gb|ADI14856.1| binding-protein-dependent transport systems inner membrane component [Truepera radiovictrix DSM 17093] Length = 300 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 27/193 (13%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L+A + +L L A S L P+LD MQ++P +L V +F + L PG Sbjct: 98 VLAAEALVVLLGVPLGILMALSDAAQRALTPLLDAMQTMPSFVYLIPAVTFFGLGLVPGV 157 Query: 131 VIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 V +FA+ ++ N+ L +P+D+ E + +F + WQ+ + +P + Sbjct: 158 VA----TVVFALPPLVRLTNL------GLRQVPKDIVEAAEAFGGTRWQRLRKVELPAAR 207 Query: 190 P----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P G+ ++M+S+S VV + +I G G+G + + D+ A Sbjct: 208 PMLLAGVNQSIMLSLS----MVVIAALIGAG-------GLGQEVIRGMNTLDIALGFEAG 256 Query: 246 LTMLGVIFLYDQL 258 L ++ + + D+L Sbjct: 257 LAIVIMAVVLDRL 269 >gi|163740528|ref|ZP_02147922.1| sulfonate ABC transporter, permease protein, putative [Phaeobacter gallaeciensis 2.10] gi|161386386|gb|EDQ10761.1| sulfonate ABC transporter, permease protein, putative [Phaeobacter gallaeciensis 2.10] Length = 283 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 23/170 (13%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSL 158 LVP++ + IP + L V++F G + A+ +A+ + T + Y ++ Sbjct: 126 LVPLVAALFPIPKIALLPLFVIWF---------GIDEASKYALIAFGTFTPTVVATYGAV 176 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS + +P +MPG++ + +S++ +VA+EM+ Sbjct: 177 DNVDRTLIRMGQSFNLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLGAEH- 235 Query: 219 VIPLPGIGSYIALAIKEQDLLAILY--AMLTMLGV-----IFLYDQLLFR 261 GIG+YI A DL + A+L++LGV I L ++ L R Sbjct: 236 -----GIGAYILEAGSLYDLERLFAGVAILSILGVLVSSLIGLIERRLLR 280 >gi|206971955|ref|ZP_03232904.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus AH1134] gi|206733340|gb|EDZ50513.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus AH1134] Length = 278 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|149911834|ref|ZP_01900436.1| putative spermidine/putrescine ABC transporter, permease protein [Moritella sp. PE36] gi|149805087|gb|EDM65111.1| putative spermidine/putrescine ABC transporter, permease protein [Moritella sp. PE36] Length = 285 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 10/102 (9%) Query: 122 YFMNLY----PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 + +NL+ P K++ E A IFA+ + M +Y S+ I ++L E ++ S + Sbjct: 133 FLLNLHIIDKPLKLMYTEFAVIFALVYILLPFMILPLYSSIEKIDKNLIEAAKDLGASKF 192 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 F + +P +MPG++ M++ F+ A M + D V Sbjct: 193 TTFLKVELPLTMPGIIAGMLL------VFLPAMGMFYIADLV 228 >gi|33594704|ref|NP_882348.1| ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33598890|ref|NP_886533.1| ABC transporter permease protein [Bordetella parapertussis 12822] gi|33603969|ref|NP_891529.1| ABC transporter permease protein [Bordetella bronchiseptica RB50] gi|33564780|emb|CAE44108.1| ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33568945|emb|CAE35359.1| ABC transporter permease protein [Bordetella bronchiseptica RB50] gi|33575020|emb|CAE39686.1| ABC transporter permease protein [Bordetella parapertussis] gi|332384115|gb|AEE68962.1| ABC transporter permease protein [Bordetella pertussis CS] Length = 293 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 10/159 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILG 114 L LP A+ + + + FV TLA S R G L+ L M +P + Sbjct: 84 LGSGQLPARAALSFSVLFKGYAAGVALAFVLTTLAV-STRFGRDLLSTLTAMFNPLPAIA 142 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 L +++F L G ++ F + S +W M +MY + L R++ L Sbjct: 143 LLPLAMLWF-GLGQGSLV-------FVLIHSVLWAMAVNMYSGFLTVSETLRMAGRNYGL 194 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 +G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 195 TGLRYVLGILVPAALPSILSGLRIAWAFAWRTLIAAELV 233 >gi|33597693|ref|NP_885336.1| inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33602539|ref|NP_890099.1| inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33574121|emb|CAE38448.1| probable inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] gi|33576978|emb|CAE34058.1| probable inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] Length = 275 Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 9/163 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M R++ + +A+ + +GI IG +P L P + P+++ + Sbjct: 79 SMMRLLAGLALAAAVGTLIGILIGLTRWGRFVFKPLLSLFMPVPTLAWTPILLLLIGV-- 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N L++ + ++ NV+AG VA S + + + +I+PGI PY Sbjct: 137 --DNKTTILIVFIAASFEVILNVVAGIENMNVKVFWVARSMGASRLQIFFKVIVPGILPY 194 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G AW A I +E+ + + GLG I E++E Sbjct: 195 LITGVRLGSGYAWRALIAAEM-----LAASSYGLGFMIYEASE 232 >gi|322372964|ref|ZP_08047500.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp. C150] gi|321278006|gb|EFX55075.1| phosphate ABC transporter, permease protein PstC [Streptococcus sp. C150] Length = 304 Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 L P ++++ IP + GF+ VV F+ G L+ F +F + +TF Sbjct: 118 LQPAIELLVGIPSVVYGFIGLQVVVPFVRFIFGGTGFGILSGTFVLFVMILPTVTFMTTD 177 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 +L +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 178 TLRAVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGN 237 Query: 217 DTVIP 221 V+P Sbjct: 238 SAVVP 242 >gi|220924754|ref|YP_002500056.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219949361|gb|ACL59753.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 251 Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 19/155 (12%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 ++ +++ +P L ++ F +++F + P AA+F I W + F+ + ++ + Sbjct: 97 VVRVLRPVPGLAWVPFAIIWF-GVSPA-------AAVFIIAVGVFWIVYFASHGAIRGVD 148 Query: 163 RDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 RDL EV+ +F S ++ + P + PG++ + ++ W VVA+E+ V Sbjct: 149 RDLVEVAEAFGFRSAPERLLTVVWPAATPGILVGVRTAIGQAWMAVVAAEIFGVA----- 203 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 G+G + ++ LLA ++ ML + LY Sbjct: 204 --GLGQRM---MQASTLLATDIVVVYMLTMALLYG 233 >gi|47569049|ref|ZP_00239739.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Bacillus cereus G9241] gi|47554318|gb|EAL12679.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Bacillus cereus G9241] Length = 278 Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|329571840|gb|EGG53518.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX1467] Length = 288 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%) Query: 45 PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102 P DI D P+ V +LP A + LSA+V + + S + G L P Sbjct: 53 PSDIGADGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 109 Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +++++ IP + GF+ +V+ + +++ G G LA F +F + +T +L Sbjct: 110 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 168 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 169 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 228 Query: 219 VIP 221 V+P Sbjct: 229 VMP 231 >gi|262281438|ref|ZP_06059219.1| alkanesulfonate transporter [Acinetobacter calcoaceticus RUH2202] gi|262257264|gb|EEY76001.1| alkanesulfonate transporter [Acinetobacter calcoaceticus RUH2202] Length = 265 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 40/187 (21%), Positives = 88/187 (47%), Gaps = 23/187 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR +L L ++++IP L + +++F E A +F + + + Sbjct: 95 GSSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPI 146 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Y + ++ L E+ +S+ LS WQ + + +P +MP ++ + ++ W Sbjct: 147 YINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV----- 201 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264 +++V +T+ GIG Y+ + +E D++ + LYA+L L + Q+L R ++ Sbjct: 202 -LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQILERYLL 257 Query: 265 VWSNKFR 271 W + ++ Sbjct: 258 RWHSGYQ 264 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + I N G + E+ Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ ++ W+ ++ IILPG P + G A G W IV+E S G+G Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578 + E V++G+L+ VLA L R+L WH Y Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQILERYLLRWHSGY 263 >gi|297203734|ref|ZP_06921131.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] gi|197711783|gb|EDY55817.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] Length = 257 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 15/131 (11%) Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 LL+++ + W +L + G E A S+ + W RY++ P PY +TG A Sbjct: 124 LLVVYASFWQVLIQTLYGVQDVDPVADETARSYGLGAWARIRYVLWPTALPYVMTGVRLA 183 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCF 565 ++ +A G + + GLGA IA + + PE+ VLG+LI Sbjct: 184 A------AVALILAITGELVIGAPGLGARIAVAQNSQAVPEMYALIVVTGVLGLLINVGA 237 Query: 566 VLALNRFL-WH 575 R L WH Sbjct: 238 RTVERRALAWH 248 >gi|33592075|ref|NP_879719.1| inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33571719|emb|CAE41218.1| probable inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|332381491|gb|AEE66338.1| inner membrane component of binding-protein-dependent transport system [Bordetella pertussis CS] Length = 275 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 9/163 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M R++ + +A+ + +GI IG +P L P + P+++ + Sbjct: 79 SMMRLLAGLALAAAVGTLIGILIGLTRWGRFVFKPLLSLFMPVPTLAWTPILLLLIGV-- 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N L++ + ++ NV+AG VA S + + + +I+PGI PY Sbjct: 137 --DNKTTILIVFIAASFEVILNVVAGIENMNVKVFWVARSMGASRLQIFFKVIVPGILPY 194 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +TG G AW A I +E+ + + GLG I E++E Sbjct: 195 LITGVRLGSGYAWRALIAAEM-----LAASSYGLGFMIYEASE 232 >gi|320326464|gb|EFW82516.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331757|gb|EFW87695.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330872583|gb|EGH06732.1| taurine ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 291 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 11/208 (5%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 S G+++ Y D LG ++ R+ + + A + IP+GI IG P Sbjct: 77 SKGWLLATKGYMDATLWQHLGA-SLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLI 135 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P + PL+V + L L L IF I G Sbjct: 136 EFYRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPTKVRA 191 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S T W+ R+++LP P +TG G W+ + +E+ + T+GLG Sbjct: 192 AQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFM 245 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570 + + + VVLG+L++ A+ Sbjct: 246 VQSAAQFLVTDVVVLGILVIAVIAFAME 273 >gi|254441234|ref|ZP_05054727.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198251312|gb|EDY75627.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 345 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 25/193 (12%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +LSA V+ + AA RL + P+LD+MQ++P +L +V+F + + PG Sbjct: 168 VLSACVVCMSIGVPIGIGAAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL 227 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V A + + + + +T + + + P+ L E + +F + QK + +P +MP Sbjct: 228 V-----ATVIFVLPASI-RLT---HLGISSTPQSLLEAADAFGATKRQKLVKVELPSAMP 278 Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 GL +M+S+S M+V+ ++ G+G + A+ D + L Sbjct: 279 QIMTGLNQTIMLSLS----------MVVIA-ALVGADGLGVPVVRALNTVDTAKGFESGL 327 Query: 247 TMLGVIFLYDQLL 259 ++ V + D++L Sbjct: 328 IIVVVAIMLDRML 340 >gi|146338667|ref|YP_001203715.1| ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146191473|emb|CAL75478.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 258 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RVV ++A+ I +P+G+ +G + + ++PF PA+ F PL++ Sbjct: 67 MTVWRVVGGFVLAAAIAVPLGLLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG 126 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L LL+IF G+ + I+ + D E A + + ++LP Sbjct: 127 ELQ-----KLLIIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIARVLLPSAA 181 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 182 PDIAEVLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 218 >gi|91777725|ref|YP_552933.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91690385|gb|ABE33583.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 275 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 8/111 (7%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +L ++++IP + + VV+F IG EL+ + I + + M S Y ++ I Sbjct: 118 VLQMLRTIPFIALVPIFVVWFG-------IG-ELSKVALIVGAAISPMYLSTYHAIRGID 169 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L E+ R+FRL+ + + +P ++PG++ + S + +VA+E I Sbjct: 170 PKLLELGRTFRLTRGHQIRLIILPTALPGILVGVRYSAAISLLALVAAEQI 220 >gi|295397453|ref|ZP_06807539.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294974306|gb|EFG50047.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 249 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 16/192 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPG 129 R+ + SLL L AKS+ + +L +QS+P + +L +++F +N Sbjct: 61 RLAIGLSASLLLGTSIGILIAKSKTADDTIGSMLLALQSVPSIVWLPLAIMWFGLN---- 116 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E A IF + + M ++ + N+P + +R+ G F + P S+ Sbjct: 117 -----EKAVIFIVILGGTFVMALNIRTGIKNVPPLYIKAARTMGSGGIDLFRRVIFPASI 171 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P +V ++ + W ++A E++ G PG+G + A D+ ++ M+ + Sbjct: 172 PHVVTGSRLAWAFAWRSLMAGELLSTG------PGLGYTLRYASDFGDMSLVICVMIIIG 225 Query: 250 GVIFLYDQLLFR 261 + + DQ +F+ Sbjct: 226 VIGAIVDQFIFQ 237 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 18/197 (9%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII-WIPVGIWIGFRPHISSKIQ 419 WQS ++ + ++Y G + FR + + + AS++ +GI I I Sbjct: 39 WQSF---ISGIADKTLIY----GLVASFRRLAIGLSASLLLGTSIGILIAKSKTADDTIG 91 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 L + P+ V+ PL + ++ LN + ++I G + + N+ G P + Sbjct: 92 SMLLALQSVPSIVWLPL---AIMWFGLNEKA-VIFIVILGGTFVMALNIRTGIKNVPPLY 147 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + A + G +R +I P P+ VTG+ A AW + + E+ S G GL Sbjct: 148 IKAARTMGSGGIDLFRRVIFPASIPHVVTGSRLAWAFAWRSLMAGELLSTG------PGL 201 Query: 540 GAYIAESTEKGSFPEVV 556 G + +++ G V+ Sbjct: 202 GYTLRYASDFGDMSLVI 218 >gi|229085575|ref|ZP_04217810.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock3-44] gi|228697723|gb|EEL50473.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock3-44] Length = 208 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R +L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 44 LASQNERFSKILRPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 97 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 98 --IRFTDL-GIRQVPEDLIEAANAFGSTTSQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 152 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 153 ---------MVVTASLVGAPGLG 166 >gi|91778491|ref|YP_553699.1| ABC proline/glycine betaine transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|296156328|ref|ZP_06839167.1| choline ABC transporter, permease protein [Burkholderia sp. Ch1-1] gi|91691151|gb|ABE34349.1| ABC proline/glycine betaine transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|295893834|gb|EFG73613.1| choline ABC transporter, permease protein [Burkholderia sp. Ch1-1] Length = 300 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 AKSR + M++ P+LD+MQ++P +L + F G+V G IFA+ + Sbjct: 114 AKSRTIEMIVRPVLDLMQTMPAFVYLIPAAMLF---GLGRVPGILSTVIFAMPPAVRLT- 169 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + ++ R++ E ++F + WQ + + P ++P G+ +MM++S Sbjct: 170 ----SLGIKHVNREIVEAGQAFGCTPWQLLYKVQFPNALPSIMTGVNQTIMMALS----M 221 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 V+ + M+ G G+G+ + +I+ D+ Sbjct: 222 VIIASMVGAG-------GLGNDVLASIQRLDI 246 >gi|83716597|ref|YP_438999.1| taurine ABC transporter permease [Burkholderia thailandensis E264] gi|167615544|ref|ZP_02384179.1| taurine ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257142105|ref|ZP_05590367.1| taurine ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83650422|gb|ABC34486.1| taurine ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 283 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 12/186 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ +A + IP G+ I + + P + P + PL+V Sbjct: 93 SLARITTAFALALVTAIPAGVLIATNRIVRGAVDPIVEFYRPIPPLAYLPLMVVWFGIGD 152 Query: 446 LNPNLWLSLLMIFGTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+I+ T + L AGAS A+S T + +++LP P Sbjct: 153 AS-----KVLLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRLKLLCHVVLPSALP 207 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 208 DILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGA 261 Query: 565 FVLALN 570 +AL Sbjct: 262 IAIALE 267 >gi|319781844|ref|YP_004141320.1| choline ABC transporter permease protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167732|gb|ADV11270.1| choline ABC transporter, permease protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 284 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 25/174 (14%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA ++ V++P+LD+MQ++P +L + F + PG ++ IF I T+ Sbjct: 122 AAHKPKVYRVMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIV----TIIFVIPTAVRL 177 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 + + ++P+ + E +F + Q W + +P ++P GL ++M+S+S Sbjct: 178 T-----HLGVVSVPKSIVEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLS--- 229 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + +I G G+G+ I A+ + + L A L ++ + + D++ Sbjct: 230 -MVVFAALIGAG-------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 275 >gi|257483752|ref|ZP_05637793.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330987195|gb|EGH85298.1| taurine ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012097|gb|EGH92153.1| taurine ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 291 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 10/168 (5%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GI IG P + P + PL+V + L L L IF Sbjct: 116 PIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP-- 172 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I G A S T W+ R+++LP P +TG G W+ + Sbjct: 173 -IAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLV 231 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 +E+ + T+GLG + + + VVLG+L++ A+ Sbjct: 232 AAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273 >gi|238755713|ref|ZP_04617047.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia ruckeri ATCC 29473] gi|238706080|gb|EEP98463.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia ruckeri ATCC 29473] Length = 360 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 175 ARSNNAAKIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 229 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 230 TI---LGIKQVPADLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS----M 282 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 283 VVIASMIAVG-------GLGQMVLRGIGRLDM 307 >gi|229030467|ref|ZP_04186507.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH1271] gi|228730906|gb|EEL81846.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH1271] Length = 278 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|222080199|ref|YP_002540062.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221738844|gb|ACM39623.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 293 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 39/73 (53%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P K + E + I I + + + ++Y SL I R+L +R+ + WQ F + +P Sbjct: 150 PLKFLYTEFSVILGILSFVLPYIILNIYVSLDGIDRNLLHAARTLGCTSWQAFLEITLPL 209 Query: 188 SMPGLVWNMMMSM 200 S+PGL +++S+ Sbjct: 210 SLPGLCSGVLLSL 222 >gi|149908274|ref|ZP_01896938.1| putative permease [Moritella sp. PE36] gi|149808816|gb|EDM68749.1| putative permease [Moritella sp. PE36] Length = 296 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 21/196 (10%) Query: 68 TTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 T+R +S ++IS + + A+S R+ V+ PILDIMQ++P +L V Sbjct: 102 NTMRTMSIILISTMLAVIIGIPIGISMARSNRVQSVVTPILDIMQTMPAFVYLIPVV--- 158 Query: 124 MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 M L GK+ G I+A+ ++ N+ + + +++ E + ++ S Q+ + Sbjct: 159 MLLGIGKIPGVIAVIIYAVPPVIRLTNLGIRL------VDKEVLEAATAYGASPMQRLFG 212 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P +MP ++ + ++ VV + MI V G+G + +I Q L Sbjct: 213 VQLPLAMPNIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFTLGL 265 Query: 243 YAMLTMLGVIFLYDQL 258 L ++ + ++D++ Sbjct: 266 MNGLAIVALAIIFDRI 281 >gi|329117384|ref|ZP_08246101.1| phosphate ABC transporter, permease protein PstC [Streptococcus parauberis NCFD 2020] gi|326907789|gb|EGE54703.1| phosphate ABC transporter, permease protein PstC [Streptococcus parauberis NCFD 2020] Length = 311 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +L+ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFVRSLFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 VDSLKAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|148265891|ref|YP_001232597.1| binding-protein-dependent transport systems inner membrane component [Geobacter uraniireducens Rf4] gi|146399391|gb|ABQ28024.1| binding-protein-dependent transport systems inner membrane component [Geobacter uraniireducens Rf4] Length = 289 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 6/112 (5%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W+IL N I+G + + A S + + +ILP P V+GA + A Sbjct: 169 WFILINTISGVKCVDPLYLKAAKSMGTSDTDLFIKVILPASIPSIVSGARLGVKSSLMAV 228 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 I +E+ + +GLG +I S PE+ G+L + F L +N L Sbjct: 229 IGAEMLA------AKSGLGFFIQNSHLMYRIPEMYAGILALAIFGLLINYLL 274 >gi|254821792|ref|ZP_05226793.1| ABC transporter permease protein [Mycobacterium intracellulare ATCC 13950] Length = 281 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +++ +R+L+ ++ + L +SR V P++++ + IP + + ++ F Sbjct: 83 AQSLIRILTGFGLAAVVGVATGVLLGRSRLFADVFGPLVELARPIPAIAMVPVAILLFPT 142 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G V LAA F I S ++ +P E+ R+ WQ + + Sbjct: 143 DEAGIVFITFLAAYFPIMVST--------RHAVRALPTLWEDSVRTLGGGRWQVLTQVVL 194 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMI 213 P +PG+ + + M W V+++EMI Sbjct: 195 PGILPGVFGGLSVGMGVAWICVISAEMI 222 >gi|84685060|ref|ZP_01012959.1| ABC transporter, inner membrane subunit [Maritimibacter alkaliphilus HTCC2654] gi|84666792|gb|EAQ13263.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2654] Length = 281 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 G V P ++ M S P F+ +V+F K++ AA+F I + Sbjct: 115 GRVFDPFVNAMNSTPGAAFIPLIIVWFGLYTEAKIVVVWNAALFPIL--------INTAA 166 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + + RDL E+++SF W FW + VP ++P ++ Sbjct: 167 GIASANRDLTEMAQSFGAGRWSLFWQVMVPDALPSIL 203 >gi|254228036|ref|ZP_04921466.1| ABC transporter, permease protein [Vibrio sp. Ex25] gi|262395984|ref|YP_003287837.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio sp. Ex25] gi|151939532|gb|EDN58360.1| ABC transporter, permease protein [Vibrio sp. Ex25] gi|262339578|gb|ACY53372.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio sp. Ex25] Length = 299 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 25/172 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A S R+ V+ P+LD+MQ++P +L V M L GK+ G I+AI ++ N Sbjct: 129 ASSNRIQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ + + +P +MP G+ +MM++S Sbjct: 186 LGIRL------VDKEVLEAATAFGASSKQRLFGVQLPLAMPTIMAGINQTIMMALS---- 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 M+V+ ++I + G+G + +I Q L L ++ + L+D+ Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|329944190|ref|ZP_08292449.1| glycine betaine transport system permease protein opuAB [Actinomyces sp. oral taxon 170 str. F0386] gi|328530920|gb|EGF57776.1| glycine betaine transport system permease protein opuAB [Actinomyces sp. oral taxon 170 str. F0386] Length = 292 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 16/132 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + A T + + A + +L+F AA+++ + ++ P+LD+MQ++P +L +V++ Sbjct: 92 ENAMETLVLVTIATLTALVFAIPLGIWAARNKYVSAIIRPVLDLMQTMPAFVYLIPSVLF 151 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQ 178 F + + PG +F + +++M + + + + ++ E RSF + WQ Sbjct: 152 FSIGVVPG------------MFATLIFSMPPGVRMTELGIKQVDKETVEAGRSFGATDWQ 199 Query: 179 KFWYLGVPFSMP 190 + +P ++P Sbjct: 200 ILRGIQLPLAVP 211 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 17/160 (10%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 IAW + + + T L +I LG T+ V + + A + IP+GIW + Sbjct: 65 IAWMAKSWRLALGTAITFLLIISLGQWENAMETLVLVTIATLTALVFAIPLGIWAARNKY 124 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN--PNLWLSLL--MIFGTQWYILFNVI 469 +S+ I+P L+ PA V+ + V ++ + P ++ +L+ M G + L Sbjct: 125 VSAIIRPVLDLMQTMPAFVYL---IPSVLFFSIGVVPGMFATLIFSMPPGVRMTEL---- 177 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + E SF T W+ R I LP P + G Sbjct: 178 -GIKQVDKETVEAGRSFGATDWQILRGIQLPLAVPTIMAG 216 >gi|315029509|gb|EFT41441.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX4000] Length = 313 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%) Query: 45 PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102 P DI D P+ V +LP A + LSA+V + + S + G L P Sbjct: 76 PSDIGADGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 132 Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +++++ IP + GF+ +V+ + +++ G G LA F +F + +T +L Sbjct: 133 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 191 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 192 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 251 Query: 219 VIP 221 V+P Sbjct: 252 VMP 254 >gi|56698439|ref|YP_168813.1| sulfonate ABC transporter, permease protein, putative [Ruegeria pomeroyi DSS-3] gi|56680176|gb|AAV96842.1| sulfonate ABC transporter, permease protein, putative [Ruegeria pomeroyi DSS-3] Length = 262 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 18/156 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 LVP++ + IP + L V++F G G++ A I FT V + Y ++ Sbjct: 105 LVPLVAAIFPIPKIALLPLFVIWF-----GIDEGSKYALIALGTFTPTV----VATYGAV 155 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF L W + +P ++PG++ + +S++ G +VA+EM+ Sbjct: 156 DNVDRGLIRMGQSFGLGWWSIVRKIVLPGALPGILSGLRVSLAIGIILLVAAEMLGAEH- 214 Query: 219 VIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI 252 GIG+YI A A+ + + L +L+ LGV+ Sbjct: 215 -----GIGAYILQAGALYDLERLFAGVVILSCLGVL 245 >gi|222153113|ref|YP_002562290.1| phosphate ABC transporter permease [Streptococcus uberis 0140J] gi|222113926|emb|CAR42145.1| putative phosphate ABC transporter permease protein [Streptococcus uberis 0140J] Length = 311 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ +V + L+ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQIVVPFVRTLFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 VDSLKAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|194292308|ref|YP_002008215.1| nitrate-sulfonate transport system, inner membrane component [Cupriavidus taiwanensis LMG 19424] gi|193226212|emb|CAQ72161.1| putative nitrate-sulfonate transport system, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 319 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+G + P+L ++ +P L T +F + Y AA+F I + + + Sbjct: 150 SRRIGYWVHPVLRVLGPLPSTALLPLTFYFFPSSYS--------AAVFLIALATAFPVAV 201 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + + + +V+R+ SGW + +P ++P + + M + + +V +EM Sbjct: 202 LTWSGVAGVNKSYYDVARTLGASGWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVTAEM 261 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + V G+G Y+ A + +YA L ++ ++F Sbjct: 262 MGVKS------GLGWYLTWAQGWASYVN-MYAALIVMALLF 295 >gi|148974933|ref|ZP_01811913.1| ABC transporter permease protein [Vibrionales bacterium SWAT-3] gi|145965442|gb|EDK30691.1| ABC transporter permease protein [Vibrionales bacterium SWAT-3] Length = 271 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 113 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 162 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 163 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 216 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W N+ Sbjct: 217 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWENQ 271 >gi|163940536|ref|YP_001645420.1| binding-protein-dependent transport systems inner membrane component [Bacillus weihenstephanensis KBAB4] gi|163862733|gb|ABY43792.1| binding-protein-dependent transport systems inner membrane component [Bacillus weihenstephanensis KBAB4] Length = 278 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 35/180 (19%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPTIR 170 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 171 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 220 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 S+S +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 221 SLS-----------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|332162774|ref|YP_004299351.1| glycine betaine transporter membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667004|gb|ADZ43648.1| glycine betaine transporter membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861135|emb|CBX71398.1| glycine betaine/L-proline transport system permease protein proW [Yersinia enterocolitica W22703] Length = 376 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 191 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 245 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 246 TI---LGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 298 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 299 VVIASMIAVG-------GLGQMVLRGIGRLDM 323 >gi|257067829|ref|YP_003154084.1| carbohydrate ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256558647|gb|ACU84494.1| carbohydrate ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 291 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 34/141 (24%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRL-------------GMVLVPILDIMQSIP 111 A+ T R++ +++ L + +A + + + L + L+P DI+Q Sbjct: 91 AAVTVARVVGQLLLCALAGYAFARMTFRGKNLLFALVLSILMVPYQIYLIPQYDIVQQ-- 148 Query: 112 ILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 LG+L V G IF+ F TF M Q +PR LEE +R Sbjct: 149 -LGWLN------------TVAGIAAPGIFSAFG------TFLMRQHFMGMPRSLEEAARL 189 Query: 172 FRLSGWQKFWYLGVPFSMPGL 192 + WQ FW + P S P L Sbjct: 190 DGANPWQTFWRIMFPLSGPAL 210 >gi|163746754|ref|ZP_02154111.1| binding-protein-dependent transport systems inner membrane component [Oceanibulbus indolifex HEL-45] gi|161379868|gb|EDQ04280.1| binding-protein-dependent transport systems inner membrane component [Oceanibulbus indolifex HEL-45] Length = 277 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +LSA V+ + A RL + P+LD+MQ++P +L +V+F + + PG Sbjct: 100 VLSACVVCMGVGVPIGIAVAHRPRLYAWVAPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + I +Q+ + + P+ L E +++F Q W + +P+++P Sbjct: 160 IATVIFVLPAPIRLTQL---------GISSTPKALLEAAQAFGAKPRQTLWKIELPYALP 210 Query: 191 ----GLVWNMMMSMS 201 GL +M+S+S Sbjct: 211 QIMTGLNQTIMLSLS 225 >gi|313894852|ref|ZP_07828412.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312976533|gb|EFR41988.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 247 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 10/161 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + + +A I P+GI +G+ P I+ + P L P F P+V+ + Sbjct: 58 SLMRIALGLSLAVAIGYPIGILMGYFPRINRILAPMLYLAYPVPKIAFLPVVMLLLGVGE 117 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L + L+++F ++ V + P E + W+ R+I+LP P Sbjct: 118 AGKILLIFLIIVF----QVVVAVRDATAGIPAATYEPLRVLGASFWQMVRHIVLPASLPK 173 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 ++T A A + +E ++G + G+G YI ++ Sbjct: 174 FITAVRIAMATAISVLFFTE--TFGTKY----GIGYYIMDA 208 >gi|302543428|ref|ZP_07295770.1| putative nitrate ABC transporter, permease protein [Streptomyces hygroscopicus ATCC 53653] gi|302461046|gb|EFL24139.1| putative nitrate ABC transporter, permease protein [Streptomyces himastatinicus ATCC 53653] Length = 281 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 29/151 (19%), Positives = 69/151 (45%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + + R+L+ ++ + V T A+S +L P+L++++ IP + + ++ Sbjct: 70 QDLTDSLTRILTGFALAAVLGVVVGTAIARSPLASDLLSPVLEVLRPIPAIALVPVAILL 129 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + E +F FT+ + + S ++ + EE + W+ Sbjct: 130 FPS--------NEQGIVFITFTAAFFPVMVSTRHAVRALTPVWEEAVLTMGGGRWRVLGS 181 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++PG++ + + + W V+++EMI Sbjct: 182 VVLPGALPGILGGLSVGIGVSWICVISAEMI 212 >gi|260767494|ref|ZP_05876430.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio furnissii CIP 102972] gi|260617394|gb|EEX42577.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio furnissii CIP 102972] Length = 280 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T + + +A IS+L +AA + V+ PILD+MQ++P +L T+V Sbjct: 89 QEMLETFVLVFAATTISVLIGVPLGIMAAHRPWMYTVMRPILDLMQTVPTFVYLIPTLVL 148 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI + +T Y + +P L E ++F S + + Sbjct: 149 FGLGIVPGLIS----TIIFAI--AAPIRLT---YLGVTRVPEALIEAGKAFGASKMKLLF 199 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + M+G ++ S +VV ++ G+G + A+ ++ Sbjct: 200 KVELPAALPSI-------MAGITQCIMLSLSMVVIAALVGADGLGKPVIRALNTVNISQG 252 Query: 242 LYAMLTMLGVIFLYDQLLFRP 262 A L ++ V + D+L P Sbjct: 253 FEAGLAIVLVAIILDRLCKAP 273 >gi|221198282|ref|ZP_03571328.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] gi|221208221|ref|ZP_03581225.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221171869|gb|EEE04312.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221182214|gb|EEE14615.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] Length = 291 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYIL 465 IG + + P ++L PA + PL + + P+ LS++ I G + IL Sbjct: 118 IGRYRALEDALLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMMFITFVGALFPIL 171 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N + GA A A S G+ + +ILPG P TG G AW + +E Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + + + G+G + S ++P++V+G+ ++ Sbjct: 232 MIAGQY------GIGYFTWASYTLQNYPDIVVGMALI 262 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 8/124 (6%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 + R L L+P L++++ IP + ++ ++ F + +EL+ +F F ++ + Sbjct: 119 GRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPI 170 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + L +RS G+ + + +P + P + + + M WF +V + Sbjct: 171 LLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTA 230 Query: 211 EMIV 214 EMI Sbjct: 231 EMIA 234 >gi|29376307|ref|NP_815461.1| phosphate ABC transporter, permease protein [Enterococcus faecalis V583] gi|255972548|ref|ZP_05423134.1| phosphate ABC transporter [Enterococcus faecalis T1] gi|255975661|ref|ZP_05426247.1| phosphate ABC transporter [Enterococcus faecalis T2] gi|256619252|ref|ZP_05476098.1| ABC-type phosphate transport system [Enterococcus faecalis ATCC 4200] gi|256853312|ref|ZP_05558682.1| phosphate ABC transporter [Enterococcus faecalis T8] gi|256959165|ref|ZP_05563336.1| ABC-type phosphate transport system [Enterococcus faecalis DS5] gi|256961740|ref|ZP_05565911.1| ABC-type phosphate transporter [Enterococcus faecalis Merz96] gi|256964936|ref|ZP_05569107.1| ABC-type phosphate transporter [Enterococcus faecalis HIP11704] gi|257079202|ref|ZP_05573563.1| ABC-type phosphate transporter [Enterococcus faecalis JH1] gi|257082367|ref|ZP_05576728.1| ABC-type phosphate transport system [Enterococcus faecalis E1Sol] gi|257084998|ref|ZP_05579359.1| ABC-type phosphate transport system [Enterococcus faecalis Fly1] gi|257087043|ref|ZP_05581404.1| ABC-type phosphate transport system [Enterococcus faecalis D6] gi|257090073|ref|ZP_05584434.1| ABC phosphate transporter permease [Enterococcus faecalis CH188] gi|257416279|ref|ZP_05593273.1| ABC-type phosphate transport system [Enterococcus faecalis AR01/DG] gi|257419480|ref|ZP_05596474.1| ABC phosphate transporter [Enterococcus faecalis T11] gi|257422375|ref|ZP_05599365.1| ABC phosphate transporter permease [Enterococcus faecalis X98] gi|294779415|ref|ZP_06744816.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis PC1.1] gi|300860681|ref|ZP_07106768.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TUSoD Ef11] gi|29343770|gb|AAO81531.1| phosphate ABC transporter, permease protein [Enterococcus faecalis V583] gi|255963566|gb|EET96042.1| phosphate ABC transporter [Enterococcus faecalis T1] gi|255968533|gb|EET99155.1| phosphate ABC transporter [Enterococcus faecalis T2] gi|256598779|gb|EEU17955.1| ABC-type phosphate transport system [Enterococcus faecalis ATCC 4200] gi|256711771|gb|EEU26809.1| phosphate ABC transporter [Enterococcus faecalis T8] gi|256949661|gb|EEU66293.1| ABC-type phosphate transport system [Enterococcus faecalis DS5] gi|256952236|gb|EEU68868.1| ABC-type phosphate transporter [Enterococcus faecalis Merz96] gi|256955432|gb|EEU72064.1| ABC-type phosphate transporter [Enterococcus faecalis HIP11704] gi|256987232|gb|EEU74534.1| ABC-type phosphate transporter [Enterococcus faecalis JH1] gi|256990397|gb|EEU77699.1| ABC-type phosphate transport system [Enterococcus faecalis E1Sol] gi|256993028|gb|EEU80330.1| ABC-type phosphate transport system [Enterococcus faecalis Fly1] gi|256995073|gb|EEU82375.1| ABC-type phosphate transport system [Enterococcus faecalis D6] gi|256998885|gb|EEU85405.1| ABC phosphate transporter permease [Enterococcus faecalis CH188] gi|257158107|gb|EEU88067.1| ABC-type phosphate transport system [Enterococcus faecalis ARO1/DG] gi|257161308|gb|EEU91268.1| ABC phosphate transporter [Enterococcus faecalis T11] gi|257164199|gb|EEU94159.1| ABC phosphate transporter permease [Enterococcus faecalis X98] gi|294453544|gb|EFG21945.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis PC1.1] gi|300849720|gb|EFK77470.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TUSoD Ef11] gi|323480916|gb|ADX80355.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis 62] Length = 306 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%) Query: 45 PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102 P DI D P+ V +LP A + LSA+V + + S + G L P Sbjct: 69 PSDIGADGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 125 Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +++++ IP + GF+ +V+ + +++ G G LA F +F + +T +L Sbjct: 126 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 184 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 185 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 244 Query: 219 VIP 221 V+P Sbjct: 245 VMP 247 >gi|81428116|ref|YP_395115.1| phosphate ABC transporter transmembrane protein [Lactobacillus sakei subsp. sakei 23K] gi|78609757|emb|CAI54803.1| Phosphate ABC transporter, membrane-spanning subunit [Lactobacillus sakei subsp. sakei 23K] Length = 307 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 30/134 (22%), Positives = 66/134 (49%), Gaps = 9/134 (6%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIG--AELAAIFAIFTSQV 147 +R +L P+++++ IP + GF+ +VV +++ G G A +F + V Sbjct: 117 KRGEKILQPVMELLVGIPSVVYGFIGLSVVVPTMRHIFGGSGFGILAGTCVLFIMILPTV 176 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 +MT +L ++PR E S + + WQ W + + + PG++ ++ M+ + Sbjct: 177 TSMT---VDALKSVPRHYREASLALGATRWQTTWKVVLKAATPGILTGVVFGMARAFGEA 233 Query: 208 VASEMIVVGDTVIP 221 +A +M++ ++P Sbjct: 234 LAVQMVIGNAALMP 247 >gi|309972484|gb|ADO95685.1| Probable ABC transporter permease protein [Haemophilus influenzae R2846] Length = 245 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 15/165 (9%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + A L + SR++ VL+PIL I Q+IP+ V++F K++ + L F + Sbjct: 74 ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV-- 131 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 T + Y L N P+ +++++F +S + + +P ++P + +++S Sbjct: 132 ------TAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS--- 182 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 VA VVG+ V G+G Y+ + + + +++A L +L Sbjct: 183 ---VAPIGAVVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLIL 223 >gi|228991603|ref|ZP_04151547.1| Glycine betaine transport system permease protein opuAB [Bacillus pseudomycoides DSM 12442] gi|228997708|ref|ZP_04157315.1| Glycine betaine transport system permease protein opuAB [Bacillus mycoides Rock3-17] gi|229009063|ref|ZP_04166402.1| Glycine betaine transport system permease protein opuAB [Bacillus mycoides Rock1-4] gi|228752233|gb|EEM01922.1| Glycine betaine transport system permease protein opuAB [Bacillus mycoides Rock1-4] gi|228762052|gb|EEM10991.1| Glycine betaine transport system permease protein opuAB [Bacillus mycoides Rock3-17] gi|228768172|gb|EEM16791.1| Glycine betaine transport system permease protein opuAB [Bacillus pseudomycoides DSM 12442] Length = 253 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 35/148 (23%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R +L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 89 LASQNERFSKILRPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 144 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 145 FTD----------LGIRQVPEDLIEAANAFGSTTSQKLFKVQLPLATGTIMAGVNQSIML 194 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226 S+S +VV +++ PG+G Sbjct: 195 SLS-----------MVVTASLVGAPGLG 211 >gi|254456657|ref|ZP_05070086.1| probable taurine uptake ABC transporter permease protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083659|gb|EDZ61085.1| probable taurine uptake ABC transporter permease protein [Candidatus Pelagibacter sp. HTCC7211] Length = 641 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 10/155 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV + ++ II +P+G+++G P +L P + PL++S + Sbjct: 450 SFLRVFLGLVFGIIIGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLIISVLGI-- 507 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N L+ + ++ + AGAS A S + + RY+I P P Sbjct: 508 --DNTGKIFLLFMVSLSIMIISARAGASGTQLSKIHAAHSLGASKKQILRYVIFPNSLPE 565 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +TG A G W + +E + TTG+G Sbjct: 566 ILTGIRVAVGMCWGTLVAAEFLAG------TTGIG 594 >gi|256762744|ref|ZP_05503324.1| phosphate ABC transporter [Enterococcus faecalis T3] gi|256683995|gb|EEU23690.1| phosphate ABC transporter [Enterococcus faecalis T3] Length = 306 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%) Query: 45 PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102 P DI D P+ V +LP A + LSA+V + + S + G L P Sbjct: 69 PSDIGTDGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 125 Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +++++ IP + GF+ +V+ + +++ G G LA F +F + +T +L Sbjct: 126 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 184 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 185 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 244 Query: 219 VIP 221 V+P Sbjct: 245 VMP 247 >gi|227518946|ref|ZP_03948995.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227553566|ref|ZP_03983615.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229545630|ref|ZP_04434355.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229549821|ref|ZP_04438546.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|293383447|ref|ZP_06629360.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis R712] gi|293388899|ref|ZP_06633384.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis S613] gi|307269570|ref|ZP_07550909.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX4248] gi|307273032|ref|ZP_07554278.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0855] gi|307275781|ref|ZP_07556920.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX2134] gi|307277878|ref|ZP_07558962.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0860] gi|307289297|ref|ZP_07569253.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0109] gi|307291804|ref|ZP_07571675.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0411] gi|312901837|ref|ZP_07761102.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0470] gi|312903507|ref|ZP_07762687.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0635] gi|312907724|ref|ZP_07766715.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis DAPTO 512] gi|312910342|ref|ZP_07769189.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis DAPTO 516] gi|312951688|ref|ZP_07770583.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0102] gi|227073635|gb|EEI11598.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227177296|gb|EEI58268.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229305090|gb|EEN71086.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229309198|gb|EEN75185.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|291079238|gb|EFE16602.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis R712] gi|291081680|gb|EFE18643.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis S613] gi|306497070|gb|EFM66616.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0411] gi|306500006|gb|EFM69367.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0109] gi|306505275|gb|EFM74461.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0860] gi|306507473|gb|EFM76604.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX2134] gi|306510017|gb|EFM79041.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0855] gi|306514190|gb|EFM82766.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX4248] gi|310626752|gb|EFQ10035.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis DAPTO 512] gi|310630405|gb|EFQ13688.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0102] gi|310633383|gb|EFQ16666.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0635] gi|311289615|gb|EFQ68171.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis DAPTO 516] gi|311291030|gb|EFQ69586.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0470] gi|315027914|gb|EFT39846.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX2137] gi|315031982|gb|EFT43914.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0017] gi|315037168|gb|EFT49100.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0027] gi|315144997|gb|EFT89013.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX2141] gi|315147454|gb|EFT91470.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX4244] gi|315149835|gb|EFT93851.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0012] gi|315152291|gb|EFT96307.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0031] gi|315156092|gb|EFU00109.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0043] gi|315158267|gb|EFU02284.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0312] gi|315162426|gb|EFU06443.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0645] gi|315163911|gb|EFU07928.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX1302] gi|315167281|gb|EFU11298.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX1341] gi|315169649|gb|EFU13666.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX1342] gi|315174816|gb|EFU18833.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX1346] gi|315576033|gb|EFU88224.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0309B] gi|315577797|gb|EFU89988.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0630] gi|315580608|gb|EFU92799.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecalis TX0309A] gi|327535322|gb|AEA94156.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length = 313 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 10/183 (5%) Query: 45 PRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV-LVP 102 P DI D P+ V +LP A + LSA+V + + S + G L P Sbjct: 76 PSDIGADGKPM---VGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGAKFLQP 132 Query: 103 ILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +++++ IP + GF+ +V+ + +++ G G LA F +F + +T +L Sbjct: 133 VIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMTVDAL 191 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 192 KAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVIGNAA 251 Query: 219 VIP 221 V+P Sbjct: 252 VMP 254 >gi|218711074|ref|YP_002418694.1| putative Aliphatic sulfonates transport system permease protein [Escherichia coli ED1a] gi|218349857|emb|CAQ87258.1| putative Aliphatic sulfonates transport system permease protein [Escherichia coli ED1a] Length = 252 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ + + I N G KE+A S +++ R+ I++P P VTG A Sbjct: 123 IIVLASVFPIFLNTRDGLRRVSTAHKELAISLNLSPLRYLLAIVIPSATPSVVTGFRLAF 182 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G +W A I +E+ + ++GLG I +S E V++G+L Sbjct: 183 GYSWRALIGAELIA------ASSGLGYLIIDSQEMMRTDAVIVGIL 222 >gi|123441275|ref|YP_001005262.1| glycine betaine transporter membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088236|emb|CAL11025.1| glycine betaine/L-proline transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 393 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 208 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 262 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 263 TI---LGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 315 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 316 VVIASMIAVG-------GLGQMVLRGIGRLDM 340 >gi|302554989|ref|ZP_07307331.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] gi|302472607|gb|EFL35700.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] Length = 304 Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust. Identities = 48/230 (20%), Positives = 97/230 (42%), Gaps = 14/230 (6%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P D+ ++V L Y + R L +L+ L A+ + + L PI Sbjct: 81 APSDVWNVVQTAWLQGELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKVVRAALGPI 140 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIP 162 L +QS+P + ++ V++ +G + ++A I V ++ + + +P Sbjct: 141 LSGLQSLPSVAWVPPAVIW---------LGLNNSMMYAVILLGAVPSIANGLVSGVDQVP 191 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV-GDTVIP 221 R+ +G + W++ +P ++PG V + + W ++A+E+I D + Sbjct: 192 PLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV- 250 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 G+G + D+ + A+L +L V D L+F P+ W + R Sbjct: 251 --GLGQLLENGRNASDMAMVFEAILLILIVGIAIDLLIFSPLERWVLRNR 298 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 8/182 (4%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +I P+G+ + + + + P L + P+ + P V + LN N + ++ Sbjct: 116 ALVIGTPLGLLVARVKVVRAALGPILSGLQSLPSVAWVP---PAVIWLGLN-NSMMYAVI 171 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G I +++G P F + TG + +I+LP P YV G Sbjct: 172 LLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAF 231 Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 +W + + +E +AS+ + + GLG + V +L++ +A++ ++ Sbjct: 232 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILIVGIAIDLLIFS 288 Query: 576 PL 577 PL Sbjct: 289 PL 290 >gi|254505374|ref|ZP_05117521.1| ABC transporter, membrane spanning protein [proline/glycine betaine] [Vibrio parahaemolyticus 16] gi|219551491|gb|EED28469.1| ABC transporter, membrane spanning protein [proline/glycine betaine] [Vibrio parahaemolyticus 16] Length = 299 Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 29/177 (16%) Query: 69 TLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T+R LS + + + + V A+S R+ + P+LDIMQ++P +L V M Sbjct: 103 TMRTLSIITVCTMLSIVLGIPIGIAMARSNRVQSTVTPMLDIMQTMPAFVYLIPVV---M 159 Query: 125 NLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 L GK+ G I+AI ++ N+ + + +++ E S +F + Q+ + + Sbjct: 160 LLGIGKIPGLIAVVIYAIPPVIRLTNLGIRL------VDKEVLEASTAFGANAKQRLFGV 213 Query: 184 GVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 +P +MP G+ +MM++S M+V+ ++I + G+G + +I Q Sbjct: 214 QLPLAMPTIMAGINQTIMMALS----------MVVIA-SMIGVKGLGQPVLKSITNQ 259 >gi|85860755|ref|YP_462957.1| sulfate transport system permease [Syntrophus aciditrophicus SB] gi|85723846|gb|ABC78789.1| sulfate transport system permease protein [Syntrophus aciditrophicus SB] Length = 280 Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 18/159 (11%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS----- 439 I++ RV+ ++A + IP+GI +G+ + + F L P + PLV++ Sbjct: 66 ISLVRVLAGYLLAVCLAIPLGILMGYYGTVYRLLNGFLALFRPIPPLAWVPLVLAWFGVA 125 Query: 440 ----------CVSYYHLNPNLWLSLLMIF--GTQWYILFNVIAGASAFPNDFKEVASSFH 487 +Y +LN NL LS++ I G + +L + I G + + A Sbjct: 126 SLASMFGVEEGKAYLYLN-NLKLSMIFIIFIGAFYPVLTSAIHGVMGVRSTLLDSARVLG 184 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 W +R I+LP P V G G AW + +E+ Sbjct: 185 AGEWDIFRKILLPAAAPSIVNGMRIGLGVAWMCLVSAEM 223 >gi|260460414|ref|ZP_05808666.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gi|259034059|gb|EEW35318.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 659 Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 +++ P LD+MQ+IP +L ++ F N +I AIF + M + Sbjct: 182 LIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIAT------AIFATP--PMVRATMLG 233 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P ++++ S + QK W + +P + P L+ + + V+ + MI G Sbjct: 234 LSRVPSEIDDFSEMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIASMIGAG- 292 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G + LA++ + + A L ++ + D+L Sbjct: 293 ------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 327 >gi|312960707|ref|ZP_07775212.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas fluorescens WH6] gi|311284365|gb|EFQ62941.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas fluorescens WH6] Length = 273 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 8/153 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ S + R+L I V+A SR L P ++SIP L ++ +++ Sbjct: 72 KHISASLGRVLLGFAIGAGLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLW 131 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 K++ + A F ++ + V ++ +I R L EV + + S + Sbjct: 132 LGIDETSKIVLIAIGAFFPVYLNGV--------AAIRDIDRKLVEVGQMYGFSRRRLVRR 183 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P ++PGL + +S W F+VA+E+I Sbjct: 184 ILLPAALPGLFTGLRSGLSLAWMFLVAAELIAA 216 >gi|307244628|ref|ZP_07526732.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] gi|306492009|gb|EFM64058.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] Length = 249 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 IQP + A P F L + VS N ++ +S L++ I NV+ G + + Sbjct: 91 IQPLMATIQAIPVVSFIILCLIWVS--SRNLSVLISFLLVLPI---IYTNVLTGIDSIDS 145 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 F ++A F + + RYI L ++P+ + + G W + I +EV Sbjct: 146 SFMDLAKVFKMKRSKIIRYIYLSEVYPHLKSATYVSLGLCWKSGIAAEV 194 >gi|304392280|ref|ZP_07374222.1| choline ABC transporter, permease protein [Ahrensia sp. R2A130] gi|303296509|gb|EFL90867.1| choline ABC transporter, permease protein [Ahrensia sp. R2A130] Length = 278 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 14/105 (13%) Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 PILD+MQ++P +L +++F + + PG V A + + + + + + Sbjct: 130 PILDLMQTLPTFVYLIPAIIFFGIGMVPGLV-----ATVIFVIPAPIRLTQLGIAAT--- 181 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 P L E +F S WQ + +P+++P GL +M+S+S Sbjct: 182 -PAALREAGTAFGASSWQMLRKVELPYALPQIMAGLTQTIMLSLS 225 >gi|295835830|ref|ZP_06822763.1| ABC transporter, permease [Streptomyces sp. SPB74] gi|295825724|gb|EFG64431.1| ABC transporter, permease [Streptomyces sp. SPB74] Length = 299 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 17/232 (7%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 A G W + +T +L IW ++ R + ++A +I P+G+ + + Sbjct: 76 APGAVWDELS---EAWTRGKLLGYIW---TSVERGLFGFVLALVIGTPLGLLVSRVRFVR 129 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + I P L + P+ + P V + LN ++ +++++ G I +++G Sbjct: 130 AAIGPILSGLQSLPSVAWVP---PAVLWLGLNSSMMYAVILL-GAVPSIANGLVSGVDQV 185 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHL 534 P + + TG R +I+LP P Y+ G +W + + +E +AS + + Sbjct: 186 PPLYLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI 245 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 GLG + S V L + ++ +A++ ++ PL R LR Sbjct: 246 ---GLGQLLENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLE---RRVLR 291 >gi|294648756|ref|ZP_06726214.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] gi|292825326|gb|EFF84071.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] Length = 267 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 23/187 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR +L L ++++IP L + +++F E A +F + + M Sbjct: 97 GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPM 148 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Y + ++ L E+ +S+ L+ WQ + + +P +MP ++ + S+ W Sbjct: 149 YINTYHGIRSVDPQLIEMGKSYGLNRWQLYKEIILPGAMPSILVGLRFSLGLVWV----- 203 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264 +++V +T+ GIG Y+ + +E D++ + LYA+L L + Q L R ++ Sbjct: 204 -LLIVAETISAQAGIG-YMTMNAREFLQTDIVLVGILLYALLGKLADVL--AQALERYLL 259 Query: 265 VWSNKFR 271 W ++ Sbjct: 260 RWHAGYQ 266 >gi|157146316|ref|YP_001453635.1| hypothetical protein CKO_02074 [Citrobacter koseri ATCC BAA-895] gi|157083521|gb|ABV13199.1| hypothetical protein CKO_02074 [Citrobacter koseri ATCC BAA-895] Length = 256 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 8/151 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ + + R LSA +++L L S L VL P + ++ +P + + VV+ Sbjct: 60 EHVAVSLARALSAFSVAILIGIPLGLLMGLSEGLAAVLNPFVQFLRPLPKIALIPLAVVW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 IG E + F IF + ++ ++ I R V+++ S Q F Sbjct: 120 LG-------IG-EASKFFLIFIATFLSVVVGASAAVDRIGRSRIRVAQTLGASRKQIFLR 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P ++P L + +S+ GW ++A+EM+ Sbjct: 172 VVLPDALPELFTTVRLSIGIGWTSLIAAEMV 202 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 28/166 (16%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R + +A +I IP+G+ +G +++ + PF Q L P PL V Sbjct: 63 AVSLARALSAFSVAILIGIPLGLLMGLSEGLAAVLNPFVQFLRPLPKIALIPLAV----- 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494 +WL + ++++++F +V+ GASA + VA + + + + Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGASAAVDRIGRSRIRVAQTLGASRKQIF 169 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 ++LP P T + G W + I +E+ + ++GLG Sbjct: 170 LRVVLPDALPELFTTVRLSIGIGWTSLIAAEMVA------ASSGLG 209 >gi|150402370|ref|YP_001329664.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C7] gi|150033400|gb|ABR65513.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C7] Length = 253 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV++ +IA IP+GI +G+ I+ + +L P + PL ++++ Sbjct: 59 VSIERVLIGFLIAGAFAIPIGILMGYYSLINDLLDMTVELFRPIPPLAWVPL---ALAWF 115 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + ++ G + IL N I+G + P E A + + + +I+P P Sbjct: 116 GIGES-SMHFIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGSTKDILKSVIVPASSP 174 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG G AW + +E+ Sbjct: 175 DILTGLRIGAGIAWMCVVAAEM 196 >gi|328551972|gb|AEB22464.1| OpuAB [Bacillus amyloliquefaciens TA208] gi|328910239|gb|AEB61835.1| Glycine betaine transport system permease protein [Bacillus amyloliquefaciens LL3] Length = 282 Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ++++++IS++ A++ + ++ PILD+MQ++P +L ++F N+ Sbjct: 92 QTLALVVTSVLISIIIGVPIGVWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ MT + +P DL E + +F + Q+ + + +P Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTSQRLFKVQLP 203 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + ++ + S+ ++A M+V+ ++ PG+GS + A+ + Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245 >gi|229135631|ref|ZP_04264409.1| ABC transporter permease protein [Bacillus cereus BDRD-ST196] gi|228647811|gb|EEL03868.1| ABC transporter permease protein [Bacillus cereus BDRD-ST196] Length = 167 Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 16/155 (10%) Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P ++ + P+ +L A P P+++ PN+ S+ M G I+ ++ Sbjct: 2 PLLARVLDPYLVVLNAMPKVALGPIIIVI-----FGPNISSSIAM--GVIISIIITILVI 54 Query: 472 ASAF---PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 SAF +++ +V +F W+ ++++ILP FP ++ G +W I Sbjct: 55 YSAFQEVDSNYIKVMDTFGANKWQCYKHVILPSSFPAIISTLKVNVGLSWVGVI------ 108 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 +G + + GLG I+ + +F V+L V++ C Sbjct: 109 FGELLVSKQGLGYLISYGFQVFNFTLVLLSVMLTC 143 >gi|254245525|ref|ZP_04938846.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [Burkholderia cenocepacia PC184] gi|124870301|gb|EAY62017.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [Burkholderia cenocepacia PC184] Length = 270 Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 19/171 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ G + + N G + + E+ Sbjct: 110 QMIRNIPALAMIPLVIL---WFGIDEKAKL-FLVALGVFFPVYINTYHGIRSVDANLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ + G+ R +ILPG P + G A G W IV+E S +G+G Sbjct: 166 AKSYGVRGFALCRDVILPGALPSILVGVRFALGLMWVMLIVAETIS------AQSGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNR--FLWHPLYLYGTRC 584 + E VV+G+L+ VLA + R WHP Y G + Sbjct: 220 TMNAREFLQTDVVVVGILLYAVLGKLADVLAKWIERVTLRWHPAYQSGAKA 270 >gi|308172161|ref|YP_003918866.1| glycine betaine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307605025|emb|CBI41396.1| glycine betaine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 282 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ++++++IS++ A++ + ++ PILD+MQ++P +L ++F N+ Sbjct: 92 QTLALVVTSVLISIIIGVPIGVWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ MT + +P DL E + +F + Q+ + + +P Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTSQRLFKVQLP 203 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + ++ + S+ ++A M+V+ ++ PG+GS + A+ + Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245 >gi|213158534|ref|YP_002319832.1| aliphatic sulfonates transport permease protein [Acinetobacter baumannii AB0057] gi|213057694|gb|ACJ42596.1| aliphatic sulfonates transport permease protein [Acinetobacter baumannii AB0057] Length = 142 Score = 40.4 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 8/84 (9%) Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 K+ + A F +T+ V ++ N+ + L EV + +RL+ +Q+ + +P + Sbjct: 11 KITLIAIGAFFPTYTNTV--------AAIHNVDKKLIEVGKVYRLNAFQRIISIILPAAS 62 Query: 190 PGLVWNMMMSMSGGWFFVVASEMI 213 PG++ + S+S W F++A+E+I Sbjct: 63 PGILTGLRNSLSLSWMFMIAAELI 86 >gi|161524468|ref|YP_001579480.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189350777|ref|YP_001946405.1| sulfonate/nitrate/taurine transporter permease [Burkholderia multivorans ATCC 17616] gi|160341897|gb|ABX14983.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189334799|dbj|BAG43869.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 290 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYIL 465 IG + + P ++L PA + PL + + P+ LS++ I G + IL Sbjct: 117 IGRYRALEDALLPPLEVLRPIPAVAWIPLAI------LMFPSSELSMMFITFVGALFPIL 170 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N + GA A A S G+ + +ILPG P TG G AW + +E Sbjct: 171 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 230 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + + + G+G + S ++P++V+G+ ++ Sbjct: 231 MIAGQY------GIGYFTWASYTLQNYPDIVVGMALI 261 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 8/124 (6%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 + R L L+P L++++ IP + ++ ++ F + +EL+ +F F ++ + Sbjct: 118 GRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPI 169 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + L +RS G+ + + +P + P + + + M WF +V + Sbjct: 170 LLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTA 229 Query: 211 EMIV 214 EMI Sbjct: 230 EMIA 233 >gi|153011191|ref|YP_001372405.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum anthropi ATCC 49188] gi|151563079|gb|ABS16576.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum anthropi ATCC 49188] Length = 280 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N + G + ++ +++ + + W+ RY++ P PY++ A G + ++V Sbjct: 153 ILSNTVIGLRSADHNLRDLFRLYRASPWQRLRYLLAPSALPYFMAALKIAGGLSLIGAVV 212 Query: 524 SE-VASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 +E VA ++TGL + I ES+ + P + Sbjct: 213 AEFVAGTAG---QSTGLASRILESSFRNEIPRM 242 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 15/189 (7%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A SR + M P I+Q P++ ++Y + + +I A + A F I ++ V + Sbjct: 102 ALSRPIEMAFFPFAVILQVTPVIAIAPLILIYVRDTFSALLICAWIVAFFPILSNTVIGL 161 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + +L ++ R +R S WQ+ YL P ++P + + ++GG + A Sbjct: 162 RSADH--------NLRDLFRLYRASPWQRLRYLLAPSALP--YFMAALKIAGGLSLIGAV 211 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTMLG-VIFLYDQLLFRPMI-VW 266 V T G+ S I + ++ + A ++++LG VIFL L R ++ W Sbjct: 212 VAEFVAGTAGQSTGLASRILESSFRNEIPRMFAALFLVSLLGIVIFLVTSWLSRLVLGRW 271 Query: 267 -SNKFRLER 274 ++ R ER Sbjct: 272 HESEIRRER 280 >gi|91778720|ref|YP_553928.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691380|gb|ABE34578.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 323 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 10/176 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +++S+I +P+GI G I+ +PF + PA F L+V+ + Y P + Sbjct: 139 VLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD-GPKI---A 194 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + V E A + + ++++PGI P Sbjct: 195 IIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGILPDLYRDQRILL 254 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW IV+E+ ++G+ YI + F V ++++ L + Sbjct: 255 GWAWTYLIVAELVG------TSSGITWYITQQARYTHFENVYAAIMMIGIIGLGTD 304 >gi|126178943|ref|YP_001046908.1| binding-protein-dependent transport systems inner membrane component [Methanoculleus marisnigri JR1] gi|125861737|gb|ABN56926.1| binding-protein-dependent transport systems inner membrane component [Methanoculleus marisnigri JR1] Length = 281 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 19/169 (11%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L + +++L + AA S L L PILD MQ++P +L V++F G V Sbjct: 98 VLVSTIVALAISIPLGIAAAGSDALNAALRPILDFMQTMPSFVYLIPAVIFFGI---GNV 154 Query: 132 IGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G +FAI + ++ N+ + +P +L EV+ +F + QK + +P ++P Sbjct: 155 PGTIATVVFAIPPALRLTNL------GIRQVPIELIEVADAFGSTPRQKLLKVQLPVALP 208 Query: 191 GLVWNMMMSMSG-GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + M+G ++A M+V+ ++I G+G + + I+ D+ Sbjct: 209 TI-------MAGVNQCIMLALSMVVIA-SMIGARGLGYQVLVGIQRVDI 249 >gi|104781701|ref|YP_608199.1| glycine betaine ABC transporter permease [Pseudomonas entomophila L48] gi|95110688|emb|CAK15401.1| putative glycine betaine ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 283 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML A +IS+L L+A++ RL VL+P+LDIMQ++P +L ++ F Sbjct: 94 QTLALMLVATLISVLVGIPLGILSARNDRLRAVLMPLLDIMQTMPSFVYLIPVLMLF--- 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV AIFA + + + ++ E +F + Q+ + + +P Sbjct: 151 GLGKV-----PAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRLQQLFGVQLP 205 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 ++P G+ MM++S VV + MI Sbjct: 206 LALPSIMAGINQTTMMALS----MVVIASMI 232 >gi|77456482|ref|YP_345987.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77380485|gb|ABA71998.1| taurine ABC transport system, permease protein [Pseudomonas fluorescens Pf0-1] Length = 279 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 10/169 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +PVGI IG + P + P + PL+V L+ L L L IF Sbjct: 103 VPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGIGELSKVL-LIYLAIFAP- 160 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 I G A S T + R++ILP P +TG G W+ Sbjct: 161 --IAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVILPSALPDILTGVRIGLGVGWSTL 218 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ + T+GLG + + + VVLG+L++ A+ Sbjct: 219 VAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIALIAFAME 261 >gi|37519742|ref|NP_923119.1| ABC transporter permease protein [Gloeobacter violaceus PCC 7421] gi|35210733|dbj|BAC88114.1| ABC transporter permease protein [Gloeobacter violaceus PCC 7421] Length = 283 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + ++++++ IP+G+ IG + +P L PA F PL++ V Sbjct: 92 SLSRVGLGFLLSALVAIPLGLLIGTFKLVEGLFEPVLGLFRYMPAAAFIPLIILWVG--- 148 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ ++++ I G+ +Y V P D+ +V+ + + +ILP P Sbjct: 149 LDEPAKVAIIFI-GSFFYNTLMVADAVKFVPADWLKVSYTLGAGRRDAFFRVILPATLPS 207 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + AWN +V+E+ + +GLG I S E+ +G+L++ Sbjct: 208 VIDTLRINIATAWNFVVVAELVA------ANSGLGYRILVSQRFLKTDEIFVGILVIGLI 261 Query: 566 VLALN 570 LA++ Sbjct: 262 GLAID 266 >gi|319784812|ref|YP_004144288.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170700|gb|ADV14238.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 660 Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 +++ P LD+MQ+IP +L ++ F N +I AIF + M + Sbjct: 183 LIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIAT------AIFATP--PMVRATMLG 234 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P ++++ S + QK W + +P + P L+ + + V+ + MI G Sbjct: 235 LSRVPSEIDDFSEMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIASMIGAG- 293 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G + LA++ + + A L ++ + D+L Sbjct: 294 ------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 328 >gi|300786900|ref|YP_003767191.1| sulfonate/nitrate/taurine ABC transporter permease [Amycolatopsis mediterranei U32] gi|299796414|gb|ADJ46789.1| permease component of ABC-type sulfonate/nitrate/taurine transport system [Amycolatopsis mediterranei U32] Length = 272 Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 22/181 (12%) Query: 95 RLGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R G LV P + +++++P LG + +++F K++ L F ++ + Sbjct: 108 RWGEALVDPPVQMLRTLPFLGLIPLFILWFGIGEETKIVLVALGVAFPLY--------LN 159 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ + L E SRS S ++ W++ VP ++P + + S+ W + Sbjct: 160 VHSGIRGADPALVEASRSLGFSRAERLWHVVVPGALPQALVGLRQSLGLAWL------AL 213 Query: 214 VVGDTVIPLPGIGSYIALAIK--EQDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 +VG+TV G+G I A + D++ +LYA+L + V +LL R ++ W Sbjct: 214 IVGETVNADAGVGYLINNAREFLRTDVVVVGLVLYALLGL--VTDALVRLLERKVLRWRT 271 Query: 269 K 269 + Sbjct: 272 R 272 >gi|30262879|ref|NP_845256.1| sulfonate ABC transporter, permease protein, putative [Bacillus anthracis str. Ames] gi|47528213|ref|YP_019562.1| sulfonate ABC transporter permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49185718|ref|YP_028970.1| sulfonate ABC transporter permease [Bacillus anthracis str. Sterne] gi|65320194|ref|ZP_00393153.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Bacillus anthracis str. A2012] gi|165868596|ref|ZP_02213256.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167631771|ref|ZP_02390098.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167637819|ref|ZP_02396098.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170685175|ref|ZP_02876399.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170704724|ref|ZP_02895190.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177649373|ref|ZP_02932375.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190565673|ref|ZP_03018593.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196032678|ref|ZP_03100092.1| putative sulfonate ABC transporter, permease protein [Bacillus cereus W] gi|227814276|ref|YP_002814285.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228927963|ref|ZP_04091008.1| aliphatic sulfonates transport permease protein ssuC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229604457|ref|YP_002867170.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254685477|ref|ZP_05149337.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254722884|ref|ZP_05184672.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254737934|ref|ZP_05195637.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254742893|ref|ZP_05200578.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254752248|ref|ZP_05204285.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254760765|ref|ZP_05212789.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|30257512|gb|AAP26742.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47503361|gb|AAT32037.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49179645|gb|AAT55021.1| sulfonate ABC transporter, permease protein, putative [Bacillus anthracis str. Sterne] gi|164715322|gb|EDR20839.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167514368|gb|EDR89735.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167532069|gb|EDR94705.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170130525|gb|EDS99386.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170670535|gb|EDT21274.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172084447|gb|EDT69505.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190563700|gb|EDV17665.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|195995429|gb|EDX59383.1| putative sulfonate ABC transporter, permease protein [Bacillus cereus W] gi|227006521|gb|ACP16264.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228831653|gb|EEM77245.1| aliphatic sulfonates transport permease protein ssuC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229268865|gb|ACQ50502.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 282 Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 10/180 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++FR I + I +G +GF + P Q+L P PL V + Sbjct: 83 SISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGF 142 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ G + + N G + +VA + + +ILP Sbjct: 143 GETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPATL 198 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + GA + G AW + +V+E+ T G+G I ++ + + V +G++I Sbjct: 199 PNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFA 252 >gi|284044215|ref|YP_003394555.1| binding-protein-dependent transporters inner membrane component [Conexibacter woesei DSM 14684] gi|283948436|gb|ADB51180.1| binding-protein-dependent transport systems inner membrane component [Conexibacter woesei DSM 14684] Length = 258 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 12/110 (10%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 V A +A + R LG L I + S+P++ V++F KV+ A LA+ F I Sbjct: 76 VIALVADRFRTLGEGLQQIALGVYSLPLIALAPVLVIWFGTGITTKVVIAALASFFPILI 135 Query: 145 SQVWNMTFSMYQSLCNIPRDLE--EVSRSFRLSGWQKFWYLGVPFSMPGL 192 N++ ++ Q+ PR LE E++ + SGWQ+F L +P+++P L Sbjct: 136 ----NLSQALRQT---DPRTLELMEIAGA---SGWQRFTRLKLPYALPPL 175 >gi|196041697|ref|ZP_03108988.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|196027466|gb|EDX66082.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus NVH0597-99] Length = 278 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|160882649|ref|ZP_02063652.1| hypothetical protein BACOVA_00602 [Bacteroides ovatus ATCC 8483] gi|156111964|gb|EDO13709.1| hypothetical protein BACOVA_00602 [Bacteroides ovatus ATCC 8483] Length = 398 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 16/189 (8%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 L PI++++ IP + GF V+ NL G+ + LA F + + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLCNLPVGE---SGLAGSFVLAIMALPTIIT 268 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A M Sbjct: 269 VTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLM 328 Query: 213 IVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 + VI PL I + IA + E Y L +LGV+ + L+ + + Sbjct: 329 VTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSVEY 388 Query: 267 SNKFRLERT 275 + L+R+ Sbjct: 389 ISSKGLKRS 397 >gi|91783657|ref|YP_558863.1| sulfate ester ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91687611|gb|ABE30811.1| Putative ABC sulfate ester transporter, innermembrane subunit [Burkholderia xenovorans LB400] Length = 292 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G A P + EVA +F + W+ R +ILP P TG A +W A++ +E Sbjct: 178 GIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAE----- 232 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ++ + +G+G + + +E+ V+ GV+++ ALN Sbjct: 233 YLLVAGSGIGNTLIDGSEQFRMDLVLFGVIVVGVTGWALN 272 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 13/137 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR ++ P D + I + ++ V+F KV+ LAA+ + T Sbjct: 122 SRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALLPV--------TA 173 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + +PR EV+R+FR S WQ + +P ++P + + +++ W + +E Sbjct: 174 HTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEY 233 Query: 213 IVVGDTVIPLPGIGSYI 229 ++V + GIG+ + Sbjct: 234 LLVAGS-----GIGNTL 245 >gi|302548557|ref|ZP_07300899.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Streptomyces hygroscopicus ATCC 53653] gi|302466175|gb|EFL29268.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Streptomyces himastatinicus ATCC 53653] Length = 317 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 10/178 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A +I +P+G+ IG ++ + P ++ A P+ V + + +S++ Sbjct: 134 LAVVIGVPLGLLIGRYRLVADLLGPLLEVFRNTAALALLPVFVLLLGIGETS---KISIV 190 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + + W IL N I+ ++A S ++ R ++ +ILP P TG A Sbjct: 191 L-YACTWPILLNTISAVRQVDPTLLKLAKSMDLSSPRLFQKVILPASVPTIFTGIRLAGA 249 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 A + +E+ GLG I S + P++ G+L + +A N+ L Sbjct: 250 NAILVLVAAEMVGAKE------GLGYLINSSQYNFAIPQMHAGILTISVIGVAFNQLL 301 >gi|226952298|ref|ZP_03822762.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp. ATCC 27244] gi|226836964|gb|EEH69347.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp. ATCC 27244] Length = 267 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 23/187 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR +L L ++++IP L + +++F E A +F + + M Sbjct: 97 GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPM 148 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Y + ++ L E+ +S+ L+ WQ + + +P +MP ++ + S+ W Sbjct: 149 YINTYHGIRSVDPQLIEMGKSYGLNRWQLYKEIILPGAMPSILVGLRFSLGLVWV----- 203 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264 +++V +T+ GIG Y+ + +E D++ + LYA+L L + Q L R ++ Sbjct: 204 -LLIVAETISAQAGIG-YMTMNAREFLQTDIVLVGILLYALLGKLADVL--AQALERYLL 259 Query: 265 VWSNKFR 271 W ++ Sbjct: 260 RWHAGYQ 266 >gi|318606880|emb|CBY28378.1| L-proline glycine betaine ABC transport system permease protein ProW [Yersinia enterocolitica subsp. palearctica Y11] Length = 393 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 208 ARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGVVVTIIFAL--PPIVRL 262 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF + Q + + +P +MP G+ +M+++S Sbjct: 263 TI---LGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS----M 315 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 316 VVIASMIAVG-------GLGQMVLRGIGRLDM 340 >gi|229046484|ref|ZP_04192139.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH676] gi|296503326|ref|YP_003665026.1| glycine betaine transport system permease [Bacillus thuringiensis BMB171] gi|228724846|gb|EEL76148.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH676] gi|296324378|gb|ADH07306.1| glycine betaine transport system permease protein [Bacillus thuringiensis BMB171] Length = 225 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 117 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 118 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 167 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226 S+S +VV +++ PG+G Sbjct: 168 SLS-----------MVVTASLVGAPGLG 184 >gi|222102208|ref|YP_002546798.1| ABC transporter component C [Agrobacterium radiobacter K84] gi|221728325|gb|ACM31334.1| ABC transporter component C [Agrobacterium radiobacter K84] Length = 255 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 77/199 (38%), Gaps = 19/199 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T++ V ++IA+++ IP+GI IG P + + +FP P+ V Sbjct: 61 TVYDAVRGLLIAALLAIPIGILIGMFPKLEVATRMLVDFGRSFPVIALLPVFVLLFGATQ 120 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + F IL I GA + SF I + ++LP P+ Sbjct: 121 TMKVVAIGIACFFP----ILLQTIYGARNLDPTIVDTVRSFRIPPHLRFFKVLLPAAGPF 176 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VL 557 TG A + ++ E+ S T G+G IA S P +L Sbjct: 177 IATGLRIATTVSILVAVGVEIVSV------TPGIGREIALSRSYNETPTTYAYIIYAGLL 230 Query: 558 GVLIMCCFVLALNRFL-WH 575 GV+I + LA R L WH Sbjct: 231 GVVITLLWDLAEARLLHWH 249 >gi|196032371|ref|ZP_03099785.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus W] gi|195995122|gb|EDX59076.1| glycine betaine/L-proline ABC transporter, permease protein [Bacillus cereus W] Length = 278 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|146338568|ref|YP_001203616.1| ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146191374|emb|CAL75379.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 269 Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV IA+++ + +G+ IG+ I+P Q+L P + PL + + Sbjct: 72 SLSRVAAGFAIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFGIAN 131 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P ++L L F + IL N I G + + + + RYI++P P Sbjct: 132 -KPAIFLVFLGAF---FPILLNTIHGVKTCDRNLIRAGAMVGGSERKLLRYIVVPAAMPS 187 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 G G AW ++ +E+ + Sbjct: 188 IFAGLRIGIGSAWMLTVTAEMVA 210 >gi|229185005|ref|ZP_04312195.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BGSC 6E1] gi|228598480|gb|EEK56110.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BGSC 6E1] Length = 225 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 171 ---------MVVTASLVGAPGLG 184 >gi|256379427|ref|YP_003103087.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM 43827] gi|255923730|gb|ACU39241.1| binding-protein-dependent transport systems inner membrane component [Actinosynnema mirum DSM 43827] Length = 269 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 19/190 (10%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 IA+++ + +G+ +G P + + P P+ + +++ ++ L+ + Sbjct: 78 IAAVVGVALGLALGRSARAMEYAGPVLTFMRSIPPPALVPVFLLL---FNIGTSMQLATI 134 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +FG W IL N + GA + + E + F I +W ++LP P G + Sbjct: 135 -VFGVLWPILLNTVDGARSVDSTKTETSEVFRIPRAQWVLGVVLPSAAPKIFAGLRVSLS 193 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE-----VVLGVL--IMCCFVLA 568 + +VSE+ + G+G+ + + + FP V+LGVL + +LA Sbjct: 194 LSLVLMVVSELVGTDN------GIGSQLLLAQRQFDFPGMWAGIVLLGVLGYTLNTVLLA 247 Query: 569 L-NRFL-WHP 576 L NR L W P Sbjct: 248 LENRALAWQP 257 >gi|187919924|ref|YP_001888955.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] gi|187718362|gb|ACD19585.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 323 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 10/176 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +++S+I +P+GI G I+ +PF + PA F L+V+ + Y P + Sbjct: 139 VLSSVIGVPIGIVCGTYSAIARLQEPFFEFFRYLPAPAFGALMVAILGIYD-GPKI---A 194 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + V E A + + ++++PGI P Sbjct: 195 IIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGILPDLYRDQRILL 254 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW IV+E+ ++G+ YI + F V ++++ L + Sbjct: 255 GWAWTYLIVAELVG------TSSGITWYITQQARYEHFDNVYAAIMMIGIIGLGTD 304 >gi|152988369|ref|YP_001347068.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150963527|gb|ABR85552.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 262 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 19/204 (9%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R + +I I + +G G + Q++ P PLV+ + Sbjct: 62 AISGWRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVIL---W 118 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G E+A S+ ++G+ +R +ILPG Sbjct: 119 FGIDESAKI-FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S G +G+G + E VVL +L+ Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISAG------SGIGYLAMNAREFLQTDVVVLAILLYA 231 Query: 564 CF-------VLALNR--FLWHPLY 578 L R WHP Y Sbjct: 232 VLGKLADLAARGLERVWLRWHPAY 255 >gi|228915387|ref|ZP_04078980.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844330|gb|EEM89388.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 225 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 171 ---------MVVTASLVGAPGLG 184 >gi|169797764|ref|YP_001715557.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|184156368|ref|YP_001844707.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acinetobacter baumannii ACICU] gi|213155436|ref|YP_002317481.1| aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii AB0057] gi|215485115|ref|YP_002327356.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB307-0294] gi|239503754|ref|ZP_04663064.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB900] gi|260557764|ref|ZP_05829978.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] gi|301347644|ref|ZP_07228385.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB056] gi|301510765|ref|ZP_07236002.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB058] gi|301595708|ref|ZP_07240716.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB059] gi|332855716|ref|ZP_08436012.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013150] gi|332866684|ref|ZP_08437146.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013113] gi|332873538|ref|ZP_08441487.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6014059] gi|169150691|emb|CAM88601.1| alkanesulfonate transport protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|183207962|gb|ACC55360.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii ACICU] gi|193075942|gb|ABO10522.2| alkanesulfonate transport protein [Acinetobacter baumannii ATCC 17978] gi|213054596|gb|ACJ39498.1| aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii AB0057] gi|213988688|gb|ACJ58987.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB307-0294] gi|260408937|gb|EEX02241.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] gi|322506238|gb|ADX01692.1| ssuC [Acinetobacter baumannii 1656-2] gi|323516114|gb|ADX90495.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii TCDC-AB0715] gi|332727302|gb|EGJ58742.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013150] gi|332734453|gb|EGJ65568.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013113] gi|332738235|gb|EGJ69113.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6014059] Length = 265 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 87/186 (46%), Gaps = 23/186 (12%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 SR +L L ++++IP L + +++F E A +F + + + Sbjct: 96 SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPIY 147 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + Y + ++ L E+ +S+ LS WQ + + +P +MP ++ + ++ W Sbjct: 148 INTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV------ 201 Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMIV 265 +++V +T+ GIG Y+ + +E D++ + LYA+L L + QLL R ++ Sbjct: 202 LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLERYLLR 258 Query: 266 WSNKFR 271 W ++ Sbjct: 259 WHAGYQ 264 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + I N G + E+ Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ ++ W+ ++ IILPG P + G A G W IV+E S G+G Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 218 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578 + E V++G+L+ VLA L R+L WH Y Sbjct: 219 TMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHAGY 263 >gi|116051463|ref|YP_789704.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|296388040|ref|ZP_06877515.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|313108800|ref|ZP_07794786.1| putative aliphatic sulfonates transport permease protein [Pseudomonas aeruginosa 39016] gi|115586684|gb|ABJ12699.1| putative aliphatic sulfonates transport permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310881288|gb|EFQ39882.1| putative aliphatic sulfonates transport permease protein [Pseudomonas aeruginosa 39016] Length = 262 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 19/204 (9%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R + +I I + +G G + Q++ P PLV+ + Sbjct: 62 AISGWRAAIGFLIGGTIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVIL---W 118 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G E+A S+ ++G+ +R +ILPG Sbjct: 119 FGIDESAKI-FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S ++G+G + E VVL +L+ Sbjct: 178 PSILVGVRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYA 231 Query: 564 CF-------VLALNR--FLWHPLY 578 L R WHP Y Sbjct: 232 VLGKLADLAARGLERVWLRWHPAY 255 >gi|332637580|ref|ZP_08416443.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Weissella cibaria KACC 11862] Length = 262 Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust. Identities = 43/220 (19%), Positives = 87/220 (39%), Gaps = 17/220 (7%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVVLIIIASIIW 401 +V VA+ W Y+ + + +W I+++R + ++I + Sbjct: 24 LIIVWQVAVDAKWIDATYVPSPLAVLEQGVTLWQAGTLQQNMGISLYRATMGLLIGGAVG 83 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +G+ G + Q++ P PL++ ++ + ++L+ I G Sbjct: 84 FVLGVANGLSRISHALFNSTIQMVRNIPHLALIPLIII---WFGIGEPAKVTLVAI-GVM 139 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + I N + G + E+ S+ +T W+ + +I PG P + G A G W Sbjct: 140 FPIYINTLHGIQSIDPKLIEMGQSYRLTKWQMFTKVIFPGAMPTILMGLRYALGVMWTTL 199 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 IVSE S ++G+G + + P + L ++I Sbjct: 200 IVSETIS------ASSGIGYMETNAQQFLDMPTIFLAIII 233 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L Q + R ++I FV SR + + ++++IP L + Sbjct: 60 TLQQNMGISLYRATMGLLIGGAVGFVLGVANGLSRISHALFNSTIQMVRNIPHLALIPLI 119 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F P KV + +F I+ + + +I L E+ +S+RL+ WQ Sbjct: 120 IIWFGIGEPAKVTLVAIGVMFPIY--------INTLHGIQSIDPKLIEMGQSYRLTKWQM 171 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 F + P +MP ++ + ++ W ++ SE I Sbjct: 172 FTKVIFPGAMPTILMGLRYALGVMWTTLIVSETI 205 >gi|254719609|ref|ZP_05181420.1| putative glycine betaine/L-proline ABC transporter, permease protein [Brucella sp. 83/13] gi|265984617|ref|ZP_06097352.1| binding-protein-dependent transport system inner membrane component [Brucella sp. 83/13] gi|306837899|ref|ZP_07470759.1| choline ABC transporter, permease protein [Brucella sp. NF 2653] gi|264663209|gb|EEZ33470.1| binding-protein-dependent transport system inner membrane component [Brucella sp. 83/13] gi|306406987|gb|EFM63206.1| choline ABC transporter, permease protein [Brucella sp. NF 2653] Length = 278 Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 14/105 (13%) Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P+LD+MQ++P +L +V+F + + PG LA + + + + + + Sbjct: 130 PVLDLMQTLPTFVYLIPAIVFFGIGMVPGL-----LATVIFVIPAPIRLTQLGISST--- 181 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 P L E +F S Q W + +P++MP GL +M+S+S Sbjct: 182 -PASLIEAGEAFGASRSQLLWKVELPYAMPQILAGLTQTIMLSLS 225 >gi|237747877|ref|ZP_04578357.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Oxalobacter formigenes OXCC13] gi|229379239|gb|EEO29330.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Oxalobacter formigenes OXCC13] Length = 250 Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust. Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 22/202 (10%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L V+S + V + SRRL + P++ ++ ++ + F +++F + Sbjct: 59 TVRRVLLGFVLSAIVGTVIGVVFGASRRLAVFFEPVISVLNTVSSAIWAVFAIIWF-GIS 117 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + + + +W+ T + R E++RSFR++ +Q + +P Sbjct: 118 DASTVTVVFMTAMPLILTNIWDAT-------RTVDRQYVELARSFRMNTFQIVRKIYIPT 170 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLA---- 240 +P ++ GW + +E I G GIG + LA ++ + A Sbjct: 171 ILPAFFSASRLAFGFGWRVSLVAETIGAGS------GIGYRLRLAADMVQSAQVFAWTVL 224 Query: 241 -ILYAMLTMLGVIFLYDQLLFR 261 I++ +L GVI ++ LFR Sbjct: 225 LIVFMVLIESGVIKPVEKWLFR 246 >gi|228985879|ref|ZP_04146027.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229156363|ref|ZP_04284458.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus ATCC 4342] gi|228627086|gb|EEK83818.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus ATCC 4342] gi|228773808|gb|EEM22226.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 225 Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 171 ---------MVVTASLVGAPGLG 184 >gi|228927837|ref|ZP_04090885.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228934061|ref|ZP_04096902.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228946395|ref|ZP_04108716.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229091790|ref|ZP_04222989.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock3-42] gi|229122332|ref|ZP_04251546.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus 95/8201] gi|229161659|ref|ZP_04289639.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus R309803] gi|228621904|gb|EEK78750.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus R309803] gi|228661181|gb|EEL16807.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus 95/8201] gi|228691572|gb|EEL45326.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock3-42] gi|228813258|gb|EEM59558.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228825575|gb|EEM71367.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228831900|gb|EEM77489.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 225 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 171 ---------MVVTASLVGAPGLG 184 >gi|229139423|ref|ZP_04267994.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BDRD-ST26] gi|229196958|ref|ZP_04323698.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus m1293] gi|228586515|gb|EEK44593.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus m1293] gi|228643970|gb|EEL00231.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BDRD-ST26] Length = 225 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 171 ---------MVVTASLVGAPGLG 184 >gi|304405669|ref|ZP_07387328.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304345708|gb|EFM11543.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 277 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 10/178 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A ++ IP+G+ IG+ P ++ + P +L A P+ V + + L Sbjct: 94 LAILLAIPLGLLIGWYPKVAELLTPLLELFRNTAALALLPVFVLILGIGETSK----VAL 149 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + + W IL N I G + A S + R ++ +ILP P TG A Sbjct: 150 VFYSCSWPILLNTINGVKNVDPLLIKSAKSMGLGSLRLFQKVILPASVPTIFTGIRLA-- 207 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GA+ SI+ VA+ + GLG I + P++ G++ + L N+ L Sbjct: 208 GAY--SILVLVAA--EMVGAKAGLGYLINYTQFNFQIPQMYAGIITISILGLLFNQLL 261 >gi|159905859|ref|YP_001549521.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C6] gi|159887352|gb|ABX02289.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C6] Length = 253 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV++ IA IP+G+ +G+ I+ + +LL P + PL ++++ Sbjct: 59 ISIKRVLIGFFIAGAFAIPIGLLMGYYSFINDLLDMTVELLRPIPPLAWVPL---ALAWF 115 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + ++ G + IL N I+G P E A + + + +++P P Sbjct: 116 GIGES-SMHFIIFIGAFFPILINTISGVKGVPVIMVEAAKTLGGSTKDILKSVVVPASSP 174 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG G AW + +E+ Sbjct: 175 DILTGLRIGAGIAWMCVVAAEM 196 >gi|119474985|ref|ZP_01615338.1| Binding-protein-dependent transport systems inner membrane component [marine gamma proteobacterium HTCC2143] gi|119451188|gb|EAW32421.1| Binding-protein-dependent transport systems inner membrane component [marine gamma proteobacterium HTCC2143] Length = 316 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 14/180 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+M R++ IA ++ + +G+ +G + + P+ +++ PA + PL + Sbjct: 123 ISMRRILFAYSIAVVLGVTIGVLVGRSRIARAAVLPYIEVIRPIPAVAWIPLAI------ 176 Query: 445 HLNPNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + P S++ I G + I+ N I G P A S + +++LP Sbjct: 177 LMWPTEESSIVYITFLGALFPIILNTIHGVKETPEVLVRAAVSLGAKKMEVFWHVVLPAA 236 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P G G +W + + E+ S + G+G + ++ ++P++V+G+LI+ Sbjct: 237 LPSIAAGLSIGMGISWFSLLAGEIISGQY------GIGYFTWDAYSMINYPDIVVGMLII 290 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L A I+++ L +SR ++P +++++ IP + ++ ++ ++P + Sbjct: 127 RILFAYSIAVVLGVTIGVLVGRSRIARAAVLPYIEVIRPIPAVAWIPLAIL----MWPTE 182 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 E + ++ F ++ + + + P L + S + FW++ +P ++P Sbjct: 183 ----ESSIVYITFLGALFPIILNTIHGVKETPEVLVRAAVSLGAKKMEVFWHVVLPAALP 238 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + + + M WF ++A E+I Sbjct: 239 SIAAGLSIGMGISWFSLLAGEII 261 >gi|116696161|ref|YP_841737.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530660|emb|CAJ97007.1| ABC-type transporter, permease component: TauT family [Ralstonia eutropha H16] Length = 265 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 8/145 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L+ I V+ T SR ++ P ++ I + ++ V+F K Sbjct: 72 RDLAGFAIGASAGLVFGTALGLSRLFERMVGPSFHTVKQISLFAWIPLISVWFGLGDAAK 131 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V+ LAA F + + ++ + +P DL EV+R R S Q W + +P + P Sbjct: 132 VVFLSLAAFFPV--------VLNTFEGIRAVPADLLEVARVLRFSRTQVLWRVVLPSAAP 183 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVV 215 + + + + W + +E ++V Sbjct: 184 SIFAGIHLGLIYAWLATLGAEYLLV 208 >gi|228959019|ref|ZP_04120720.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar pakistani str. T13001] gi|229128128|ref|ZP_04257110.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BDRD-Cer4] gi|229145361|ref|ZP_04273750.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BDRD-ST24] gi|228638200|gb|EEK94641.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BDRD-ST24] gi|228655403|gb|EEL11259.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BDRD-Cer4] gi|228800680|gb|EEM47596.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar pakistani str. T13001] Length = 196 Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 33 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 86 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 87 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 141 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 142 ---------MVVTASLVGAPGLG 155 >gi|227113085|ref|ZP_03826741.1| putative aliphatic sulfonates transport permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 264 Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 13/121 (10%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A IF + ++ + + Y + NI R L E++RS+ LSG F + +P ++P ++ Sbjct: 124 EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFSQVVLPGALPSIMV 183 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTM 248 + ++ W ++V +T+ GIG Y+A+ +E D++ ILYA+L Sbjct: 184 GIRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVVVVAIILYALLGK 236 Query: 249 L 249 L Sbjct: 237 L 237 >gi|261407407|ref|YP_003243648.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] gi|261283870|gb|ACX65841.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] Length = 258 Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +RV++ S++ IPVGI IG I +PF + P F L + Sbjct: 59 ISSYRVLLGWTFGSLLAIPVGIMIGKVGPIRVFAEPFLNFIRFIPPIAFITLFLVWFGIG 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+++ T + ++ N + G + D A S + W+ ++++P P Sbjct: 119 ETSK----IMLILYATFFIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVP 174 Query: 505 YYVTGAITACGGAWNASIVSEV 526 + TG A G ++ A I +E+ Sbjct: 175 FMFTGIRLAMGTSFMAIIGAEM 196 >gi|329926378|ref|ZP_08280854.1| putative aliphatic sulfonates transport permease protein SsuC [Paenibacillus sp. HGF5] gi|328939299|gb|EGG35659.1| putative aliphatic sulfonates transport permease protein SsuC [Paenibacillus sp. HGF5] Length = 285 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 12/160 (7%) Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+GF + P Q+L P PL + + + LL+ G+ + + Sbjct: 108 IWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFGFGETSK----ILLIAKGSFFPLY 163 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N G + N +VA + W R +I+P P+ G + G AW +V+E Sbjct: 164 VNTFLGIRSVDNRLFDVARVLQFSRWDMIRRLIVPASLPHIFLGIRLSIGVAWLGLVVAE 223 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVV-LGVLIMCC 564 + ++G+G YI S+ VV +G+L+ Sbjct: 224 LMG------SSSGIG-YIINDARSFSWTTVVFVGILVFAL 256 >gi|229097301|ref|ZP_04228263.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock3-29] gi|229103389|ref|ZP_04234071.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock3-28] gi|229116297|ref|ZP_04245687.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock1-3] gi|228667129|gb|EEL22581.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock1-3] gi|228679885|gb|EEL34080.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock3-28] gi|228686112|gb|EEL40028.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock3-29] Length = 225 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 115 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 116 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 170 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 171 ---------MVVTASLVGAPGLG 184 >gi|134102844|ref|YP_001108505.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133915467|emb|CAM05580.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 224 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 + M+++P LG +T V+ F E A+ + V + Y + N P D Sbjct: 65 NAMRALPTLGVVTLLVLSFGL--------GEAPALAGLVILAVPAIVSGTYAGITNAPPD 116 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMP 190 + +R ++ WQ+ W + +P ++P Sbjct: 117 AVDAARGMGMTSWQRLWQVELPNALP 142 >gi|125975285|ref|YP_001039195.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum ATCC 27405] gi|256003055|ref|ZP_05428047.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 2360] gi|281419275|ref|ZP_06250291.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum JW20] gi|125715510|gb|ABN54002.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum ATCC 27405] gi|255992746|gb|EEU02836.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 2360] gi|281407141|gb|EFB37403.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum JW20] gi|316939448|gb|ADU73482.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 1313] Length = 259 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R + + A + I +G+ +G+ + S I+P Q+L +FP +V ++ Sbjct: 62 VSLARFFIGYLAAIVAGITLGLLLGWNKSVWSFIEPVVQVLRPVSPIAWFPFIVL---WF 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++ I G + IL + ++G + +VA SF I + IILP FP Sbjct: 119 GIGDTPAIVIIFIAGF-FPILLSTVSGVGNVDAIYLKVADSFGIRQPQMLFKIILPAAFP 177 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G A G AW + E+ +GLG I ++ V+ G++ + Sbjct: 178 LIANGLHLALGSAWVFLVAGEMVG------AQSGLGYLIIDARNSLRSDLVLAGIIFIGA 231 Query: 565 FVLALNRFL 573 L L+R + Sbjct: 232 LGLLLDRLI 240 >gi|307322586|ref|ZP_07601926.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] gi|306891759|gb|EFN22605.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] Length = 207 Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 18/156 (11%) Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 +W ++++RV+V +A++I +P+G+ +G S ++P+ PA F PL+V Sbjct: 8 VWDIAVSIYRVLVGFCLAALIAVPIGLIMGSVQFFRSLLEPWLAFTRYMPATAFIPLLV- 66 Query: 440 CVSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 LWL + ++ GT + + V+A P E A W+ Sbjct: 67 ----------LWLGIDDTQKFSVIFVGTFFTLALMVMASTLTVPVALIEAAIMLGAKPWQ 116 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 +ILP P G AW +++E+ + Sbjct: 117 LIFDVILPAAKPAIFNDLRIVLGWAWTYIVIAEIVA 152 >gi|284009253|emb|CBA76363.1| glycine betaine/L-proline ABC transporter, permease protein [Arsenophonus nasoniae] Length = 308 Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 23/152 (15%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S+ ++ P+LD MQ+ P +L V+ F G V G + IFA+ + + Sbjct: 118 ANSKPASQIIRPLLDAMQTTPAFVYLVPIVMLF---GIGNVPGIVVTIIFAL--PPIIRL 172 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + +P DL E + SF S Q + + +P + P G+ +M+S+S Sbjct: 173 TI---LGIRQVPDDLIEAAESFGASRNQLLFKVQLPLAAPTIMAGVNQTLMLSLS----M 225 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI VG G+G + I D+ Sbjct: 226 VVIASMIAVG-------GLGQMVLRGIGRLDM 250 >gi|326793665|ref|YP_004311485.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326544429|gb|ADZ89649.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 263 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 15/163 (9%) Query: 68 TTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TLR+ L +S+L + +S L L P L ++QS P++ +V Sbjct: 69 ATLRVALMGFALSILIAIPLSIGMIRSELLNRTLYPALIVIQSTPVVAVAPLIIVLLGTD 128 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P +V+ L F + S M P ++ E+S+S R +++ W + +P Sbjct: 129 DPSRVLITCLITFFPLVVSTTTGM--------LETPPEMIELSQSLRAPRYRETWQIRIP 180 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 +++P + + +S++ V +E + G+G +I Sbjct: 181 YAIPHIFSGLRVSITLAIIGAVVAEFVAAEK------GLGYFI 217 >gi|325971774|ref|YP_004247965.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324027012|gb|ADY13771.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp. Buddy] Length = 262 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 27/217 (12%) Query: 47 DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 ++V P T +V S T +R L + +I + V A + L + L P + + Sbjct: 46 ELVRQKPFTTNVFS-------TVVRALESFLIIVASATVIGIAAGRYPLLSLALKPFVTV 98 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 +++IP++ + ++F + G V +F+ F M + + R L+ Sbjct: 99 LKAIPVMSIILLAFIWFTS---GTV------PLFSAFLMGFPVMYVQIEGGVRQKDRLLD 149 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 E+ R + + G K + +P +P V ++S W V+A+E++ V P G+G Sbjct: 150 EMCRLYDIHGKDKLIHYTIPSLLPFFVIGSRATLSMVWKVVIAAEVLTV-----PRFGVG 204 Query: 227 SYIALA---IKEQDLLA--ILYAMLTMLGVIFLYDQL 258 S + LA ++ +L+ ++ +LT LG + L+D L Sbjct: 205 SRMQLAQVQLQTDQVLSWTLIAILLTALGDL-LFDSL 240 >gi|295400736|ref|ZP_06810713.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] gi|294977317|gb|EFG52918.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] Length = 255 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 12/151 (7%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFP 476 + P+ LL+ P +F P ++ + + S+ +IF GT W+I + G Sbjct: 92 LMPYVHLLSPLPPTLFVPYAIAVLPTFE-----SASIFLIFIGTFWHIFLGTLHGVLIIE 146 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 + + A + + G +I+P P+ ++GA G A S + + + + Sbjct: 147 KQYLDNAKTLGLKGNDLLFKVIIPAASPHILSGA----GSALTMSFL--ILTMAEMFGAK 200 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 +G+G +I T+ + V+ G++ +L Sbjct: 201 SGMGYFIQYYTDFAQYDYVIAGIIFNSAVIL 231 >gi|291008764|ref|ZP_06566737.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 237 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 + M+++P LG +T V+ F E A+ + V + Y + N P D Sbjct: 78 NAMRALPTLGVVTLLVLSFGL--------GEAPALAGLVILAVPAIVSGTYAGITNAPPD 129 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMP 190 + +R ++ WQ+ W + +P ++P Sbjct: 130 AVDAARGMGMTSWQRLWQVELPNALP 155 >gi|256831080|ref|YP_003159808.1| binding-protein-dependent transport systems inner membrane component [Desulfomicrobium baculatum DSM 4028] gi|256580256|gb|ACU91392.1| binding-protein-dependent transport systems inner membrane component [Desulfomicrobium baculatum DSM 4028] Length = 278 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 22/131 (16%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 AA S+ V++PILD+MQ++P +L + +F L AIF++ +++ Sbjct: 115 AAISKGTYRVVMPILDVMQTMPAFVYLIPAIPFF-----------GLGKTAAIFSTVIFS 163 Query: 150 MTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 M ++ + IP +L E S +F + Q+ + L +P + P G+ +M+++S Sbjct: 164 MPPAIRFTCLGIRQIPAELVECSTAFGATRMQRLYKLDLPLAAPTIMAGINQTVMLALS- 222 Query: 203 GWFFVVASEMI 213 VV + MI Sbjct: 223 ---MVVIASMI 230 >gi|116695803|ref|YP_841379.1| ABC-type sulfonate transporter, permease component [Ralstonia eutropha H16] gi|113530302|emb|CAJ96649.1| ABC-type sulfonate transporter, permease component [Ralstonia eutropha H16] Length = 352 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+G + P+L ++ +P L T +F + Y AA+F I + + + Sbjct: 183 SRRIGYWVHPVLRVLGPLPSTALLPLTFYFFPSSYS--------AAVFLIALATAFPVAV 234 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + + + +V+R+ SGW + +P ++P + + M + + +V +EM Sbjct: 235 LTWSGVAGVNKSYYDVARTMGASGWFLVLRVAIPAALPQVFVGLFMGLGASFSVLVTAEM 294 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + V G+G Y+ A + +YA L ++ ++F Sbjct: 295 MGVKS------GLGWYLTWAQGWASYVN-MYAALIVMALLF 328 >gi|87120682|ref|ZP_01076575.1| putative permease [Marinomonas sp. MED121] gi|86163910|gb|EAQ65182.1| putative permease [Marinomonas sp. MED121] Length = 299 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 19/194 (9%) Query: 69 TLRMLSAMVISLLFTF----VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T+R LS + + L + L ++S R ++ PILD+MQ++P +L V M Sbjct: 103 TMRTLSIITVCTLLSIGIGIPTGILMSRSNRAQAIVTPILDVMQTMPAFVYLIPVV---M 159 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L GK+ G I+A+ V +T ++ L N ++ E + +F + Q+ + + Sbjct: 160 LLGIGKIPGVIAVIIYAV--PPVIRLT-NLGIRLVN--KETLEAATAFGATAKQRLFGIQ 214 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +MP ++ + ++ VV + MI V G+G + +I Q L+ Sbjct: 215 LPLAMPTIMAGINQTIMMALAMVVVASMIGV-------KGLGQPVLKSITNQYFTLGLFN 267 Query: 245 MLTMLGVIFLYDQL 258 L ++ + ++D++ Sbjct: 268 GLAIVALAIIFDRV 281 >gi|330812461|ref|YP_004356923.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380569|gb|AEA71919.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 260 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q+L P PLV+ ++ ++ + + L+ GT + I N G E+ Sbjct: 98 QMLRNIPHLALIPLVIL---WFGIDESAKI-FLVALGTLFPIYLNTYHGIRNVDPALVEM 153 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S+ ++G R +R +ILPG P + G A G W IV+E S ++G+G Sbjct: 154 SRSYGLSGLRLFRQVILPGALPSILVGVRFALGFMWLTLIVAETIS------ASSGIGYL 207 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-------VLALNR--FLWHPLY 578 + E VVL +L+ L R WHP Y Sbjct: 208 AMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVWLRWHPAY 252 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 15/132 (11%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + ++++IP L + +++F K+ L +F I+ + Y + N+ Sbjct: 97 VQMLRNIPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 148 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG + F + +P ++P ++ + ++ W ++V +T+ Sbjct: 149 ALVEMSRSYGLSGLRLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 202 Query: 224 GIGSYIALAIKE 235 GIG Y+A+ +E Sbjct: 203 GIG-YLAMNARE 213 >gi|228901325|ref|ZP_04065518.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis IBL 4222] gi|228908530|ref|ZP_04072370.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis IBL 200] gi|228921455|ref|ZP_04084778.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228965723|ref|ZP_04126803.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar sotto str. T04001] gi|228793982|gb|EEM41505.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar sotto str. T04001] gi|228838228|gb|EEM83546.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228851083|gb|EEM95897.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis IBL 200] gi|228858303|gb|EEN02770.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis IBL 4222] Length = 225 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 117 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 118 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 167 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226 S+S +VV +++ PG+G Sbjct: 168 SLS-----------MVVTASLVGAPGLG 184 >gi|228939906|ref|ZP_04102483.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972797|ref|ZP_04133396.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979380|ref|ZP_04139716.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis Bt407] gi|229070264|ref|ZP_04203514.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus F65185] gi|229150997|ref|ZP_04279208.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus m1550] gi|229173436|ref|ZP_04300980.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus MM3] gi|229179071|ref|ZP_04306428.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus 172560W] gi|228604439|gb|EEK61903.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus 172560W] gi|228610130|gb|EEK67408.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus MM3] gi|228632557|gb|EEK89175.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus m1550] gi|228712828|gb|EEL64753.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus F65185] gi|228780384|gb|EEM28615.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis Bt407] gi|228787012|gb|EEM34992.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819837|gb|EEM65885.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 225 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 117 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 118 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 167 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226 S+S +VV +++ PG+G Sbjct: 168 SLS-----------MVVTASLVGAPGLG 184 >gi|152977144|ref|YP_001376661.1| binding-protein-dependent transport systems inner membrane component [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025896|gb|ABS23666.1| binding-protein-dependent transport systems inner membrane component [Bacillus cytotoxicus NVH 391-98] Length = 268 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 24/174 (13%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 IIA+I+W WI P ++ + P+ +L A P P+++ PN+ S+ Sbjct: 94 IIATILW-----WI---PLVARVLDPYLVVLNAMPKVALGPIIIVI-----FGPNITSSI 140 Query: 455 LMIFGTQWYILFNVIAGASAFPN---DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 M G I+ ++ SAF ++ +V +F W+ ++ +ILP FP ++ Sbjct: 141 AM--GVIISIIITILVIYSAFQEVDANYIKVMHTFGANKWQTYQQVILPASFPTIISTLK 198 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G +W I +G + + GLG I+ + +F ++L VL+ C Sbjct: 199 VNVGLSWVGVI------FGELLVSKQGLGYLISYGFQVFNFTLILLSVLLTCVL 246 >gi|262368226|ref|ZP_06061555.1| taurine transport system permease tauC [Acinetobacter johnsonii SH046] gi|262315904|gb|EEY96942.1| taurine transport system permease tauC [Acinetobacter johnsonii SH046] Length = 314 Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 15/180 (8%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 IAS++ IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 132 IASLVGIPLGILCGFSNKISQLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + + ++++P P G Sbjct: 189 VI-GTLFQQILIIANTTRMVDRGLIEAGYTLGTNKAKSLFHVVIPAALPDIYRDLRVLLG 247 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-----VLGVLIMCCFVLALN 570 AW IVSE+ TTG+ +I + +F V ++GV+ + C V+ + Sbjct: 248 WAWTYLIVSELIG------TTTGITWFITQQARYQNFDNVYAAILIIGVIGLVCDVILMK 301 >gi|153832168|ref|ZP_01984835.1| inner membrane protein [Vibrio harveyi HY01] gi|156977775|ref|YP_001448681.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116] gi|148871479|gb|EDL70334.1| inner membrane protein [Vibrio harveyi HY01] gi|156529369|gb|ABU74454.1| hypothetical protein VIBHAR_06563 [Vibrio harveyi ATCC BAA-1116] Length = 299 Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 25/172 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R+ V+ P+LD+MQ++P +L V M L GK+ G I+AI ++ N Sbjct: 129 ARSNRVQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ + +P +MP G+ +MM++S Sbjct: 186 LGIRL------VDKEVLEAATAFGASNKQRLVGVQLPLAMPTIMAGINQTIMMALS---- 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 M+V+ ++I + G+G + +I Q L L ++ + L+D+ Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|71903592|ref|YP_280395.1| phosphate transport system permease protein [Streptococcus pyogenes MGAS6180] gi|71802687|gb|AAX72040.1| phosphate transport system permease protein [Streptococcus pyogenes MGAS6180] Length = 282 Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 95 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 153 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 154 TDSLRAVPRHYREASMAMGATCWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 213 Query: 215 VGDTVIP 221 V+P Sbjct: 214 GNSAVMP 220 >gi|163760515|ref|ZP_02167596.1| binding-protein-dependent transport systems inner membrane component [Hoeflea phototrophica DFL-43] gi|162282130|gb|EDQ32420.1| binding-protein-dependent transport systems inner membrane component [Hoeflea phototrophica DFL-43] Length = 273 Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust. Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 10/137 (7%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 VG+ +GF P++ S + PF ++ P P++ V + L ++L GT Sbjct: 96 VGVLVGFLPYVRSTLSPFIASISLIPPITILPILFIMVGLGETSKILLIAL----GTAPV 151 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + +V P + A + + W+ ++LP + P +T AW I Sbjct: 152 MTRSVAQAVMDLPKELIIKAQTLGASTWQMMTRVVLPQVLPNLITAMRLGLVPAWIFLIS 211 Query: 524 SEVASWGHIHLRTTGLG 540 +E + T+GLG Sbjct: 212 AEAIA------STSGLG 222 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 41/79 (51%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E + I I MT S+ Q++ ++P++L +++ S WQ + +P +P L+ Sbjct: 137 ETSKILLIALGTAPVMTRSVAQAVMDLPKELIIKAQTLGASTWQMMTRVVLPQVLPNLIT 196 Query: 195 NMMMSMSGGWFFVVASEMI 213 M + + W F++++E I Sbjct: 197 AMRLGLVPAWIFLISAEAI 215 >gi|327440575|dbj|BAK16940.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Solibacillus silvestris StLB046] Length = 270 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 8/169 (4%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P I I L LP + + R++ ++ L + S+ ++ P L Sbjct: 54 PLKIASTFWILLANGELPVHFLASGQRVIFGFLLGALTAIILGIATGFSKIAQQLIDPSL 113 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 +++++P+L + +++F GKV+ L A F ++ + ++ + + + Sbjct: 114 QMLRTVPLLSLIPLFILWFGVGEFGKVLMIALGAFFPVYVN--------IFLGIRLVDQK 165 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L EV+ + S +K L P +MP L+ + ++M W +V SEM+ Sbjct: 166 LYEVTGILQYSFKEKLTKLIFPSAMPNLLLGLRLAMGTSWLVLVVSEMM 214 >gi|330806952|ref|YP_004351414.1| taurine ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375060|gb|AEA66410.1| Taurine ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 279 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + ++ A + +PVGI IG + P + P + PL+V Sbjct: 87 SLERIGLGLLFAVLTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGIGE 146 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L IF I G A S T + R++I+P P Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDRAKLRAAQSLGATRAQLIRHVIVPSALPD 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 203 ILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIALI 256 Query: 566 VLALN 570 A+ Sbjct: 257 AFAME 261 >gi|310640756|ref|YP_003945514.1| glycine betaine abc transporter permease protein [Paenibacillus polymyxa SC2] gi|309245706|gb|ADO55273.1| Glycine betaine ABC transporter permease protein [Paenibacillus polymyxa SC2] Length = 864 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 30/181 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI-FTSQVW 148 A S+ ++ P+LD MQ++P +L V +F + + PG + + IFAI T ++ Sbjct: 114 AYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSLGVVPGVI----ASVIFAIPPTIRMT 169 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 N+ + + +L E S +F + QK + + +P ++P G+ +M+S+S Sbjct: 170 NL------GIMQVSDELVEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLS--- 220 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFR 261 M+V+ ++I GIG+ + A+ + + A L ++ + + D Q LF+ Sbjct: 221 -------MVVIA-SMIGAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNLFK 272 Query: 262 P 262 P Sbjct: 273 P 273 >gi|229060460|ref|ZP_04197823.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH603] gi|229133674|ref|ZP_04262500.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BDRD-ST196] gi|228649709|gb|EEL05718.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus BDRD-ST196] gi|228718843|gb|EEL70464.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH603] Length = 225 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 62 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 117 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 118 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 167 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226 S+S +VV +++ PG+G Sbjct: 168 SLS-----------MVVTASLVGAPGLG 184 >gi|50084691|ref|YP_046201.1| ABC transporter permease [Acinetobacter sp. ADP1] gi|49530667|emb|CAG68379.1| putative permease protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 279 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P + E+ + + W R IILP I P + G A G AW + E+ + G Sbjct: 171 PKKYIELGQIYQLKTRAWLRLIILPSILPPLIGGLRIALGRAWLILVAVELLAAG----- 225 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 TG+G + + V++GV I L++ L Sbjct: 226 -TGIGQMMELGRQMLRLDVVMVGVFITGVVGFGLDKVL 262 >gi|325964279|ref|YP_004242185.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Arthrobacter phenanthrenivorans Sphe3] gi|323470366|gb|ADX74051.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Arthrobacter phenanthrenivorans Sphe3] Length = 315 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 27/240 (11%) Query: 50 DIVPITLDV---------HSLPQYASRTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMV 99 D+VP LDV Q A T+L R L VIS+ L A+ L Sbjct: 86 DLVPGPLDVATQMGVLWNEGKLQEAVWTSLQRGLVGFVISVTIATPVGLLLAQVAPLRRA 145 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 P++ +Q +P + ++ +++F G A + F IF + ++ + + Sbjct: 146 FGPLISGLQVLPSVAWVPAAIIWF---------GLTDATVYFVIFMGAIPSIINGLISGV 196 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 IP V S + + +P ++PG + + + W ++A+E+I VG T Sbjct: 197 DQIPPQYRRVGTVLGASRLEMALQIILPAALPGYLGGLKQGWAFSWRSLMAAEIIAVGGT 256 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278 + G+GS + D+ ++ A+L +L V L + L+F P+ + RL R+ G+ Sbjct: 257 IG--FGLGSLLDQGRILSDMTVVMSAILLILAVGILIELLVFAPI-----EKRLLRSRGL 309 >gi|289705654|ref|ZP_06502039.1| ABC transporter, permease protein [Micrococcus luteus SK58] gi|289557602|gb|EFD50908.1| ABC transporter, permease protein [Micrococcus luteus SK58] Length = 307 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 12/163 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+L + +P + ++ V++F ++ A F + T V + + + Sbjct: 140 PLLTALMVLPNVAWVPLAVLWFGL--------SDATAYFVMLTGAVPAVVAGLTTGTDQV 191 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L +R S + + +P ++P V + + W ++A+E+I VG P Sbjct: 192 PPQLRRAARVLGASRLETALLVVLPAALPAFVSGLRQGWAFAWRGLMAAEIIAVGG---P 248 Query: 222 LP-GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 + G+G+ + E DL +L A+LT+L V L + F P+ Sbjct: 249 MGVGLGTLLHQGRAESDLAVVLCAVLTILAVGVLVELTAFGPV 291 >gi|91216934|ref|ZP_01253897.1| integral membrane components of other binding-protein-dependent transport system [Psychroflexus torquis ATCC 700755] gi|91184805|gb|EAS71185.1| integral membrane components of other binding-protein-dependent transport system [Psychroflexus torquis ATCC 700755] Length = 251 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 32/166 (19%), Positives = 75/166 (45%), Gaps = 11/166 (6%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A ++ IP+G+ + ++S +P+ + P PL + ++ ++ + L Sbjct: 70 LLAFVVAIPLGLLMSESKILNSIFEPYIDYIRYLPVPALIPL---TILFFGIDETSKIVL 126 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L I GT + + VI P ++ ++A S + + W ++ + L + P + + Sbjct: 127 LFI-GTFFPFILLVIDNLKNIPKEYFDLAYSLNYSKWDLYK-MKLKVVLPEIYDNSRISI 184 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G W +++E+ + G+G I E+ + +V +G+L Sbjct: 185 GICWTYLVIAELVAAQE------GIGHMIKEAQRFSNTADVYIGIL 224 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 21/183 (11%) Query: 79 SLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG- 133 S L FV A L ++S+ L + P +D ++ +P+ + T+++F G Sbjct: 68 SFLLAFVVAIPLGLLMSESKILNSIFEPYIDYIRYLPVPALIPLTILFF---------GI 118 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E + I +F + + +L NIP++ +++ S S W + + + +P + Sbjct: 119 DETSKIVLLFIGTFFPFILLVIDNLKNIPKEYFDLAYSLNYSKWD-LYKMKLKVVLPEIY 177 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 N +S+ W ++V +E++ + GIG I A + + + +LT+ V + Sbjct: 178 DNSRISIGICWTYLVIAELVAAQE------GIGHMIKEAQRFSNTADVYIGILTIGLVGY 231 Query: 254 LYD 256 L D Sbjct: 232 LTD 234 >gi|34495715|ref|NP_899930.1| sugar ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34101570|gb|AAQ57939.1| probable ABC transporter sugar permease [Chromobacterium violaceum ATCC 12472] Length = 286 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 14/195 (7%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRL--GMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 L + +++S L + A + RRL G +L ++ + ++ F+T + + + Y Sbjct: 93 LTVAGTLLVSALAAYPLARMKFPGRRLVFGAILATMILPSEVNFLVNFITVSKLQLTDSY 152 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V+ LA IF + Q+ +P+DL + +R S WQ FW + +P Sbjct: 153 SGVVL-PTLAGAVGIFL---------LKQAFEAVPQDLIDAARVDGASEWQIFWRIMLPL 202 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + P L +++ W + +++ PL Y+A A + + A+LT Sbjct: 203 ARPALAALTILTTVSAWNQYIWPSIVMSSPDKFPLSVGVLYLAGAFSFKTRVVAAGAVLT 262 Query: 248 MLG--VIFLYDQLLF 260 +L ++FL+ Q F Sbjct: 263 VLPILIVFLFTQRYF 277 >gi|301155785|emb|CBW15253.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 245 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 15/160 (9%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 ++ +L+P+L I Q+IP+ V++ P K++ A L F + T + Sbjct: 84 KISSLLLPVLVISQAIPVFAIAPILVLWLGYGMPSKIVMAILIIYFPV--------TAAC 135 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 Y L N P+ +++++F+ S W+ + +P ++P +++S VA V Sbjct: 136 YDGLRNTPKAWIDLAKTFKPSPWRLLLKVRLPAALPAFASGFRIAVS------VAPIGAV 189 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 +G+ V G+G Y+ + + + +++A L +L I L Sbjct: 190 IGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVAISL 228 >gi|289623910|ref|ZP_06456864.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651131|ref|ZP_06482474.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868938|gb|EGH03647.1| taurine ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 291 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 11/208 (5%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 S G+++ Y D LG ++ R+ + + A + IP+GI IG P Sbjct: 77 SKGWLLATKGYMDATLWQHLGA-SLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLI 135 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P + PL+V + + L L IF I G Sbjct: 136 EFYRPIPPLAYLPLIVIWFGIGEFS-KVLLIYLAIFAP---IAIATATGVRTVDPTKVRA 191 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S T W+ R+++LP P +TG G W+ + +E+ + T+GLG Sbjct: 192 AQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFV 245 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570 + + + VVLG+L++ A+ Sbjct: 246 VQSAAQFLVTDVVVLGILVIAVIAFAME 273 >gi|169826967|ref|YP_001697125.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168991455|gb|ACA38995.1| Putative aliphatic sulfonates transport permease protein [Lysinibacillus sphaericus C3-41] Length = 264 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 14/183 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442 +T+ V+ I +++ + I + + P +S + P+ +L A P P+++ + Sbjct: 74 VTLMETVIGFIAGTLLGTLIAILLWWSPFLSKVLDPYLVILNAMPKVALGPILIVALGPG 133 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 Y+ + L ++I Y F + PN + +V +F T W+ +R +ILP Sbjct: 134 YFSIIAMGALISIIITTIVVYTAFKGVD-----PN-YSKVLQTFGATRWQIFREVILPAS 187 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 FP ++ G +W IV G + + GLG I + +F V++ +LI+ Sbjct: 188 FPTIISTLKVNVGLSWVGVIV------GEFLVASKGLGYLIIYGFQVFNFNLVLMSLLII 241 Query: 563 CCF 565 F Sbjct: 242 AFF 244 >gi|148254724|ref|YP_001239309.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146406897|gb|ABQ35403.1| putative sulfonate ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 286 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 78/206 (37%), Gaps = 19/206 (9%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R I I +G+ +GF + I Q++ A P PLV+ + Sbjct: 90 VSLLRATAGFAIGGAIGFVLGLLVGFSRLAEALIDRSIQMIRAIPFLAVLPLVIVWLGVG 149 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ G + I N G E+A ++ R IILPG P Sbjct: 150 EAEK----VFLVALGVTFPIYINTTLGIRQVDPKLIELARVQGLSPLALIRRIILPGALP 205 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG A AW A +V+E +GLG ++ E +VL ++I Sbjct: 206 SILTGVRYALATAWLALVVAETIG------AQSGLGFLAMDAREFLRTDVIVLTIVIYAL 259 Query: 565 F-VLA------LNRFL--WHPLYLYG 581 VLA L R L WHP Y G Sbjct: 260 IGVLADLIARWLERRLLAWHPNYGAG 285 >gi|254560148|ref|YP_003067243.1| taurine ABC transporter permease [Methylobacterium extorquens DM4] gi|254267426|emb|CAX23265.1| ABC transporter, permease component; putative taurine transporter [Methylobacterium extorquens DM4] Length = 256 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 14/162 (8%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 IG P + + + P Q+L P + PL + + L+ G + IL N Sbjct: 86 IGRVPLVRALLDPVLQILRPIPVTAWLPLAMILFGLGGTSAFF----LVFLGAFYPILVN 141 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G + E A+ TG + ++LP P TG G AW +V E+ Sbjct: 142 TVFGVRSVEPRLFEAAAMLGCTGPAQFLRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMT 201 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVV---LGVLIMCCFV 566 TGLGA I E+ + S E+V +GV+ + FV Sbjct: 202 G------VQTGLGAVIMEARQL-SRTEIVICGMGVIGVAGFV 236 >gi|253995480|ref|YP_003047544.1| binding-protein-dependent transport systems inner membrane component [Methylotenera mobilis JLW8] gi|253982159|gb|ACT47017.1| binding-protein-dependent transport systems inner membrane component [Methylotenera mobilis JLW8] Length = 259 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 37/180 (20%), Positives = 80/180 (44%), Gaps = 17/180 (9%) Query: 73 LSAMVISLL----FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L VI LL F + L A S ++ P+ ++ +P+LG + ++F N Sbjct: 68 LQTTVIGLLIGGFFGLMVGGLMAVSPFANKLIGPLYHTLRQVPLLGLIPLIALWFGNDLF 127 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K++ LAA + I + ++ + I R EV+ + + Q ++ +P + Sbjct: 128 SKILIVSLAAFYPI--------VLNTFEGMRGIERKYVEVASVLKFNRLQLLVHVLLPAA 179 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 P ++ M +++ W V SE++ PG+G + +A + + ++ A++++ Sbjct: 180 TPSIMTGFMHALAFAWVSTVGSELLFSTG-----PGVGGLMLMAQESSRMDIVIVAVVSI 234 >gi|89894101|ref|YP_517588.1| hypothetical protein DSY1355 [Desulfitobacterium hafniense Y51] gi|89333549|dbj|BAE83144.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 259 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 11/192 (5%) Query: 380 IWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +W C I++ R + + + IP+G+ IG+ + P Q+ P P+ V Sbjct: 58 LWKHCSISLMRSLSGFTLGMFVAIPLGLVIGWFKKAEVFLYPLLQVFRNMPTLALLPVFV 117 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++++++G W L N IAG + A S + R + ++ Sbjct: 118 MFFGIGEFSK----TMVILWGVLWATLLNTIAGVRNVDPQLIKAARSMGVGSLRLFGTVV 173 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY G + SI+ +A+ + + GLG + PE+ Sbjct: 174 LPASLPYIFAGMRISA----TVSILILIAA--EMMGASKGLGYALFFYQSNFKIPEMYAV 227 Query: 559 VLIMCCFVLALN 570 +++M F + LN Sbjct: 228 LIVMAVFGVTLN 239 >gi|311069899|ref|YP_003974822.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter permease [Bacillus atrophaeus 1942] gi|310870416|gb|ADP33891.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter permease [Bacillus atrophaeus 1942] Length = 217 Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+++ +L + A+ ++ ++ I++I+Q++P L L F + L GKV Sbjct: 29 AVILGILVAVPLGVVLARMKKGAGTIIGIVNIVQTLPSLAILAF---FIPLLGVGKV--- 82 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AI A+F V + + Y + + ++L E + ++GW++ + +P ++P Sbjct: 83 --PAIVALFFYSVLPILRNTYTGIQGVNKNLLESGKGIGMTGWEQIRLVELPLAVP 136 >gi|153838468|ref|ZP_01991135.1| ABC transporter permease protein [Vibrio parahaemolyticus AQ3810] gi|260902296|ref|ZP_05910691.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|149748144|gb|EDM59003.1| ABC transporter permease protein [Vibrio parahaemolyticus AQ3810] gi|308110544|gb|EFO48084.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] Length = 266 Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYSIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L + F D+LL + I W NK Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKLL-KKAIPWENK 266 >gi|169629328|ref|YP_001702977.1| putative nitrate ABC transporter, permease protein [Mycobacterium abscessus ATCC 19977] gi|169241295|emb|CAM62323.1| Putative nitrate ABC transporter, permease protein [Mycobacterium abscessus] Length = 292 Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%) Query: 33 NILLHGIQETTVPRDIVDIVPITLDVHSLPQY---ASRTTLRMLSAMVISLLFTFVYATL 89 N + G++ T+P + +IV QY ++T+R+L+ ++ + + Sbjct: 59 NKVRFGLRFDTLP-TVTEIVAALTKRIGTEQYWLDLGQSTIRILTGFGLAAVLGVITGIW 117 Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +S + P+ ++ + IP + + ++ F + G V LAA F I Sbjct: 118 LGRSPLFANIFGPLTELARPIPAIAIVPVAILLFPSDEAGIVFITFLAAYFPIM------ 171 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 S ++ +P EE R+ S W + +P S+PG+ + + + W VV+ Sbjct: 172 --VSTRHAVRALPTLWEESVRTLGGSRWDVLLRVVLPGSLPGVFGGLSVGIGVAWICVVS 229 Query: 210 SEMI 213 +EMI Sbjct: 230 AEMI 233 >gi|329955883|ref|ZP_08296686.1| phosphate ABC transporter, permease protein PstC [Bacteroides clarus YIT 12056] gi|328525263|gb|EGF52313.1| phosphate ABC transporter, permease protein PstC [Bacteroides clarus YIT 12056] Length = 423 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 22/202 (10%) Query: 75 AMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTV-------VYF 123 A++I+L F A ++ ++ ++ P+++++ IP + GF V V+ Sbjct: 213 AILIALPFGLAVAVYMSEVADHKIRNLMKPVIELLSGIPSVVYGFFGLIVIVPLLQRVFD 272 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + + + G+ + AI A+ T + +T ++ N PR + E S + S WQ + + Sbjct: 273 LPVGESGLAGSIVLAIMALPT--IITVT---EDAMRNCPRAMREASLALGASQWQTIYKV 327 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQD 237 +P+S+ G+ +++ + +A M+ VI PL I + IA + E Sbjct: 328 VIPYSISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHSILEPLRTIPATIAAELGEAP 387 Query: 238 LLAILYAMLTMLGVIFLYDQLL 259 Y L +LGV+ + LL Sbjct: 388 AGGAHYEALFLLGVVLFFISLL 409 >gi|317048194|ref|YP_004115842.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316949811|gb|ADU69286.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 215 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P+LG T T+ F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPVLGIATIVLTIPTIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 N+P L E R ++ WQ+ ++ +P ++P Sbjct: 109 ENLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|258542054|ref|YP_003187487.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256633132|dbj|BAH99107.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256636189|dbj|BAI02158.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256639244|dbj|BAI05206.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642298|dbj|BAI08253.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645353|dbj|BAI11301.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648408|dbj|BAI14349.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651461|dbj|BAI17395.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654452|dbj|BAI20379.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 254 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 19/158 (12%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L I+ +++ +P L ++ F +++F G A F I S W ++ + ++ Sbjct: 96 LLEGIVRLLRPVPGLAWVPFAILWFGLNTSG--------ATFVIAISVFWINFYAAHSAV 147 Query: 159 CNIPRDLEEVSRSFRLSGW-QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +L E++ +F G+ + + + +P + PGL+ + + GW VVA+E+ V Sbjct: 148 RGVDPELYELAAAFGHGGFFGRLFKVVLPAASPGLMSGLRTGLGQGWMSVVAAELFGV-- 205 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 PGIG+ + ++ LLA ++ ML + LY Sbjct: 206 -----PGIGARM---MQASSLLATDVVVVYMLTMALLY 235 >gi|239834160|ref|ZP_04682488.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum intermedium LMG 3301] gi|239822223|gb|EEQ93792.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum intermedium LMG 3301] Length = 280 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N + G + ++ +++ + + W+ RY++ P PY++ A G + ++V Sbjct: 153 ILSNTVIGLRSADHNLRDLFRLYRASPWQRLRYLLAPSALPYFMAALKIAGGLSLIGAVV 212 Query: 524 SE-VASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 +E VA ++TGL + I ES+ + P + Sbjct: 213 AEFVAGTAG---QSTGLASRILESSFRNEIPRM 242 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 15/189 (7%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A SR + M P I+Q P++ ++Y + + +I A + A F I ++ V + Sbjct: 102 ALSRPIEMAFFPFAVILQVTPVIAIAPLILIYVRDTFSALLICAWIVAFFPILSNTVIGL 161 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + +L ++ R +R S WQ+ YL P ++P + + ++GG + A Sbjct: 162 RSADH--------NLRDLFRLYRASPWQRLRYLLAPSALP--YFMAALKIAGGLSLIGAV 211 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTMLG-VIFLYDQLLFRPMI-VW 266 V T G+ S I + ++ + A ++++LG VIFL L R ++ W Sbjct: 212 VAEFVAGTAGQSTGLASRILESSFRNEIPRMFAALFLVSLLGIVIFLVTSWLSRLVLGRW 271 Query: 267 -SNKFRLER 274 ++ R ER Sbjct: 272 HESEIRRER 280 >gi|154684792|ref|YP_001419953.1| OpuAB [Bacillus amyloliquefaciens FZB42] gi|154350643|gb|ABS72722.1| OpuAB [Bacillus amyloliquefaciens FZB42] Length = 282 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 15/169 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ++++++IS++ A++ + ++ PILD+MQ++P +L ++F N+ Sbjct: 92 QTLALVVTSVLISIIIGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ MT + +P DL E + +F + Q+ + + +P Sbjct: 151 --GVVPGVVASVIFAM--PPTIRMT---VLGIKQVPADLIEATEAFGSTTSQRLFKVQLP 203 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + ++ + S+ ++A M+V+ ++ PG+GS + A+ + Sbjct: 204 LATKTILAGINQSI------MLALSMVVIA-AMVGAPGLGSEVYSAVTQ 245 >gi|302876301|ref|YP_003844934.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|307687036|ref|ZP_07629482.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|302579158|gb|ADL53170.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] Length = 275 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 12/188 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RVV +I++++ I G+ +G + + P + PL+V Sbjct: 82 TISLKRVVEGYLISAVLGIFSGVIMGMNSKVDKFFFFVFSAIRQIPMLAWIPLIVLWFGI 141 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ +++I + + IL N ++G EV + ++++ W+ +R I P Sbjct: 142 GELSK----IIVIILASFFPILLNTVSGIKRTDKGLIEVGNMYNLSRWKKFRKIYFPSAL 197 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV-LGVLIM 562 P G G +W A + +E+ + ++G+G Y PEVV +G++++ Sbjct: 198 PSIFVGLKLGLGISWMAVVGAEIIA------ASSGIG-YRMNDARSLMQPEVVFVGMIVI 250 Query: 563 CCFVLALN 570 L ++ Sbjct: 251 ALIGLIMD 258 >gi|229012044|ref|ZP_04169223.1| Glycine betaine transport system permease protein opuAB [Bacillus mycoides DSM 2048] gi|229167388|ref|ZP_04295126.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH621] gi|228615950|gb|EEK73037.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH621] gi|228749132|gb|EEL98978.1| Glycine betaine transport system permease protein opuAB [Bacillus mycoides DSM 2048] Length = 226 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 63 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPTIR 118 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 119 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 168 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226 S+S +VV +++ PG+G Sbjct: 169 SLS-----------MVVTASLVGAPGLG 185 >gi|251795829|ref|YP_003010560.1| phosphate ABC transporter inner membrane protein PstA [Paenibacillus sp. JDR-2] gi|247543455|gb|ACT00474.1| phosphate ABC transporter, inner membrane subunit PstA [Paenibacillus sp. JDR-2] Length = 295 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 25/173 (14%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLIIIASIIWIPVGIWIGF-------R 411 ++ +G+I HF + G I +F + L+++ II +P+GI G Sbjct: 34 FRGLGHISWHFLTSPPETIRKGGGIGPQLFNSLFLLVLTMIITVPLGIGAGIYMSEYAKA 93 Query: 412 PHISSKIQPFAQLLAAFPANV--FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV- 468 I+S I+ ++L++FP+ + F L+V + NL SLL G +FN+ Sbjct: 94 GKITSAIRLVVEVLSSFPSIIVGLFGLLVIVNKF-----NLGFSLLS--GAIALTIFNLP 146 Query: 469 ------IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 G + P KE + + I+ W+ R + LP P ++G+I A G Sbjct: 147 LMVRITEQGLRSVPLQQKEASLALGISKWKTIRSVQLPIALPIVLSGSILAAG 199 >gi|159046711|ref|YP_001542379.1| binding-protein-dependent transport systems inner membrane component [Dinoroseobacter shibae DFL 12] gi|157914470|gb|ABV95898.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12] Length = 253 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 11/154 (7%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A I+ IP GI +G P +QP+ + + P V +V V ++ + L L Sbjct: 72 LAVIVGIPFGIAMGALPRFGDILQPYLYAIFSTPRVV---VVPLIVVWFGIGFEARL-FL 127 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + F + I N G D EVA SF + + R++++PG P+ V+G Sbjct: 128 VFFWSMIAISVNTAQGVRHARPDLVEVAHSFQASRLQMARHVLIPGAIPFVVSGLRIGAE 187 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAE-STE 548 A I+ G + L+ GLG I + STE Sbjct: 188 RAIVGVII------GEMFLQIVGLGGVITKGSTE 215 >gi|50083329|ref|YP_044839.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49529305|emb|CAG67017.1| alkanesulfonate transport protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 266 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 23/187 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR +L L ++++IP L + +++F E A +F + + M Sbjct: 96 GSSRIASTLLDTTLQMIRNIPALALIPLVILWFGI--------DESAKLFLVAVGVFFPM 147 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Y + ++ L E+ +S+ L+ WQ + + +P +MP ++ + S+ W Sbjct: 148 YINTYHGIRSVDPQLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWV----- 202 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFRPMI 264 +++V +T+ GIG Y+ + +E D++ + LYA+L L + Q L R ++ Sbjct: 203 -LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQALERYLL 258 Query: 265 VWSNKFR 271 W ++ Sbjct: 259 RWHAGYQ 265 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ + L L+ + G + + N G + E+ Sbjct: 110 QMIRNIPALALIPLVIL---WFGIDESAKLFLVAV-GVFFPMYINTYHGIRSVDPQLIEM 165 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ +T W+ ++ IILPG P + G + G W IV+E S G+G Sbjct: 166 GKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS------AQAGIGYM 219 Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRFL--WHPLY 578 + E V++G+L+ AL R+L WH Y Sbjct: 220 TMNAREFLQTDVVLVGILLYALLGKLADVLAQALERYLLRWHAGY 264 >gi|121602958|ref|YP_980287.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] gi|120591927|gb|ABM35366.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] Length = 259 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ RVV +++++ IP+G+ IG + + ++P + PA F PLV+ V Sbjct: 67 ISTMRVVTGWALSALLAIPLGLLIGSWRAVQALLEPLTDFIRYMPAVAFIPLVMLWVG-- 124 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ ++++ I GT + ++ V P E A + T +ILP P Sbjct: 125 -IDEGAKVAIIFI-GTFFQMVLMVAEDVRRVPMAQIEAAQTMGATRREVLEKVILPSAKP 182 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G AW +V+E+ + +GLG I ++ ++ G+L++ Sbjct: 183 ALLDTLRITMGWAWTYLVVAELVA------ANSGLGFAILKAQRFLQTDKIFAGILLIGF 236 Query: 565 FVLALNRF 572 LA+++ Sbjct: 237 IGLAIDQL 244 >gi|320197196|gb|EFW71813.1| Taurine transport system permease protein TauC [Escherichia coli WV_060327] Length = 275 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ ++ A +I IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L L IF + + +AG + A S + + ++ILPG Sbjct: 141 GETS-KILLIYLAIFAP---VAMSALAGVKSAQQVRIRAALSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P +TG G W+ + +E+ + T GLG + + E Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 235 >gi|297586981|ref|ZP_06945626.1| ABC superfamily ATP binding cassette transporter, membrane protein [Finegoldia magna ATCC 53516] gi|297574962|gb|EFH93681.1| ABC superfamily ATP binding cassette transporter, membrane protein [Finegoldia magna ATCC 53516] Length = 341 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 10/175 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I +I+ + GI G+ ++ I PF +LL P + PLV+ + ++L Sbjct: 159 IGAILGLITGILCGYSKKVNYWISPFMKLLGPIPTTTWLPLVMVLATSLFYGSVFIIAL- 217 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 G + + + I G E A + TG + I +P P G Sbjct: 218 ---GVWYAVTISTITGILNVDKSNYEAAKTLGATGNQLITKIAIPSAMPNIFGGLTIGMS 274 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A A +++E+ +GLG YI + + ++I+C +A+N Sbjct: 275 SACTALLIAEMLG------VESGLGWYITWKKSWAEYASMYGAIIIICLTFIAVN 323 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 15/164 (9%) Query: 67 RTTLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +++L++L S I + + L S+++ + P + ++ IP +L +V + Sbjct: 147 KSSLKLLFSGYFIGAILGLITGILCGYSKKVNYWISPFMKLLGPIPTTTWLPLVMVLATS 206 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L+ G V L +A+ T S + N+ + E +++ +G Q + + Sbjct: 207 LFYGSVFIIALGVWYAV--------TISTITGILNVDKSNYEAAKTLGATGNQLITKIAI 258 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 P +MP + + + MS ++ +EM+ V G+G YI Sbjct: 259 PSAMPNIFGGLTIGMSSACTALLIAEMLGVES------GLGWYI 296 >gi|229018099|ref|ZP_04174974.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH1273] gi|229024280|ref|ZP_04180739.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH1272] gi|228737055|gb|EEL87591.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH1272] gi|228743190|gb|EEL93315.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus AH1273] Length = 252 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 35/148 (23%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAI----- 142 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ Sbjct: 89 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPTIR 144 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMM 198 FT + +P DL E + +F + QK + + +P + M G+ ++M+ Sbjct: 145 FTD----------LGIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIML 194 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIG 226 S+S +VV +++ PG+G Sbjct: 195 SLS-----------MVVTASLVGAPGLG 211 >gi|288574363|ref|ZP_06392720.1| binding-protein-dependent transport systems inner membrane component [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570104|gb|EFC91661.1| binding-protein-dependent transport systems inner membrane component [Dethiosulfovibrio peptidovorans DSM 11002] Length = 283 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 21/170 (12%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ++++++ISLL + A+ R + P+LD MQ++P +L +++F Sbjct: 99 IITSVLISLLLGIPLGVMTAEFPRGTAFMKPLLDGMQTMPSFVYLIPAMMFF-------- 150 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 L + A+F + +++M + + L +P+ +E + ++ + WQ + +P + Sbjct: 151 ---GLGKVPAVFATLIYSMPPVIRLTTLGLRQVPKPAQEAAIAYGATRWQLLKEVRLPLA 207 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 MPG++ + + ++A M+VV +I G+G + L+I D+ Sbjct: 208 MPGIMAGINQTT------MMALAMVVV-CAMIGARGLGQEVLLSINRIDI 250 >gi|261407642|ref|YP_003243883.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] gi|261284105|gb|ACX66076.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] Length = 289 Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 12/160 (7%) Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+GF + P Q+L P PL + + + LL+ G+ + + Sbjct: 112 IWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFGFGETSK----ILLIAKGSFFPLY 167 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N G + N +VA + W R +I+P P+ G + G AW +V+E Sbjct: 168 VNTFLGIRSVDNRLFDVARVLQFSRWDMIRRLIVPASLPHIFLGIRLSIGVAWLGLVVAE 227 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVV-LGVLIMCC 564 + ++G+G YI S+ VV +G+L+ Sbjct: 228 LMG------SSSGIG-YIINDARSFSWTTVVFVGILVFAL 260 >gi|86358510|ref|YP_470402.1| spermidine/putrescine ABC transporter permease [Rhizobium etli CFN 42] gi|86282612|gb|ABC91675.1| probable spermidine/putrescine ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 304 Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%) Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157 I+ ++ IP+LG L + + M + P + + ++ A + A+ M ++ + Sbjct: 137 IIRMISWIPVLGRNGLVNSALIKMGIIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 196 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L I R L E +R SGWQ W + +P + PG M+ G FVV M Sbjct: 197 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 248 Query: 218 TVIPLPGIGSYIALAIKEQ 236 + G + +AL +K Q Sbjct: 249 VQVMSGGQSASVALMMKNQ 267 >gi|70733776|ref|YP_257416.1| taurine ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348075|gb|AAY95681.1| taurine ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 279 Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + + A + IPVGI IG + P + P + PL+V Sbjct: 87 SLQRIGLALGFAVLTAIPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGIGE 146 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ L L L IF I G A S T + R++ILP P Sbjct: 147 LSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVILPSALPD 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 203 ILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIALI 256 Query: 566 VLALN 570 A+ Sbjct: 257 AFAME 261 >gi|329113703|ref|ZP_08242478.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] gi|326696966|gb|EGE48632.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] Length = 320 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 4/132 (3%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S+I +P+G+ G P ++ I+P PA F L V+ + Y P + Sbjct: 137 VISSLIGVPLGVLCGALPAMARLIEPSVDFFRYLPAPAFGALAVAILGIYD-APKI---A 192 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + + E A + G R +++PGI P Sbjct: 193 IIVIGTLFQQILVIANTTRKLDFALIEAARTLGARGLRLLFRVVIPGILPDLYRDQRILL 252 Query: 515 GGAWNASIVSEV 526 G AW IV+E+ Sbjct: 253 GWAWTYLIVAEL 264 >gi|325970411|ref|YP_004246602.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy] gi|324025649|gb|ADY12408.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp. Buddy] Length = 270 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 10/165 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RV++ +A I IPV +G+ P + + ++P+ Q L P PLV+ + Sbjct: 80 SISLQRVLIGFGLAFICSIPVSFLMGWYPTVRNLVEPWIQFLRTIPPIALIPLVILAMGL 139 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +P + + F ++ + G A +F + + I++P F Sbjct: 140 GE-SPKYTIIFVAAF---LVMVVTIYQGVKEVDKTLIRAAYTFGASDKDLFFDIVIPASF 195 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 PY + GA + I +E+ T GLGA I + + Sbjct: 196 PYILVGARLGMAASLTTLIAAELTG------TTFGLGARIQGAQQ 234 >gi|160943035|ref|ZP_02090273.1| hypothetical protein FAEPRAM212_00512 [Faecalibacterium prausnitzii M21/2] gi|158445729|gb|EDP22732.1| hypothetical protein FAEPRAM212_00512 [Faecalibacterium prausnitzii M21/2] Length = 256 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 8/170 (4%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P QL+ A P F L + V L+ + +S LM+ + + IAGA Sbjct: 92 LAPVMQLVKATPVASFIILALVWVRGSALS--VLISFLMVLPVLYGAVRTGIAGADV--- 146 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 E+A+ F + R R I LP + P + G A G W + + +EV + + Sbjct: 147 QLLEMAAVFRLPPGRRLRSIWLPAVLPAFRQGCSVALGICWKSGVAAEVIGLPNGSIGDA 206 Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584 A I ST + +F ++L F+LAL++ + L GT+C Sbjct: 207 LYRAKITLSTGELFAWTFVIILLSAGFEKLFLLALDKAVGAVLGEEGTKC 256 >gi|157362974|ref|YP_001469741.1| binding-protein-dependent transport systems inner membrane component [Thermotoga lettingae TMO] gi|157313578|gb|ABV32677.1| binding-protein-dependent transport systems inner membrane component [Thermotoga lettingae TMO] Length = 274 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 20/135 (14%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAA--------KSRRL--GMVLVPILDIMQSIPILGFL 116 R L L I ++F V A+LAA K + L ++L+P+L MQ I+ F+ Sbjct: 69 RYFLNTLIITAIGVVFQVVLASLAAYPLARLEWKGKDLIFKLILLPMLIPMQGALIVNFI 128 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 T + + Y G V+ ++ IF IF M Q ++P+++E+ +R + Sbjct: 129 TIIKMGLYDSYFGVVLPGAVS-IFGIFL---------MRQQYFSVPKEIEDAARIDGCNE 178 Query: 177 WQKFWYLGVPFSMPG 191 +Q FW + P PG Sbjct: 179 FQVFWKITFPLVRPG 193 >gi|29346733|ref|NP_810236.1| putative ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482] gi|29338630|gb|AAO76430.1| putative ABC transporter permease protein [Bacteroides thetaiotaomicron VPI-5482] Length = 398 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 20/175 (11%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150 L PI++++ IP + GF VV F +L G+ + G+ + AI A+ T + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVVVPLIQKFFDLPVGESGLAGSIILAIMALPT--IITV 269 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A Sbjct: 270 T---EDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326 Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 M+ VI PL I + IA + E Y L +LGV+ + L+ Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLI 381 >gi|13472447|ref|NP_104014.1| ABC transporter permease [Mesorhizobium loti MAFF303099] gi|14023193|dbj|BAB49800.1| ABC transporter permease [Mesorhizobium loti MAFF303099] Length = 277 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 25/174 (14%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA ++ +++P+LD+MQ++P +L + F + PG ++ IF I T+ Sbjct: 115 AAHKPKVYRIMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIV----TIIFVIPTAVRL 170 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 + + ++P+ + E +F + Q W + +P ++P GL ++M+S+S Sbjct: 171 T-----HLGVVSVPKSIIEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLS--- 222 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + +I G G+G+ I A+ + + L A L ++ + + D++ Sbjct: 223 -MVVFAALIGAG-------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRM 268 >gi|322411866|gb|EFY02774.1| putative phosphate ABC transporter permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 311 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|297539397|ref|YP_003675166.1| binding-protein-dependent transport systems inner membrane component [Methylotenera sp. 301] gi|297258744|gb|ADI30589.1| binding-protein-dependent transport systems inner membrane component [Methylotenera sp. 301] Length = 321 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 4/131 (3%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S+I +P+GI G +S +PF + PA F L V+ + Y P + + Sbjct: 137 ISSLIGVPIGILCGTYSAVSRLNEPFIEFFRYLPAPAFGALAVAILGIYD-GPKI---AI 192 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 ++ GT + + + E A + + ++ ++I+PGI P G Sbjct: 193 IVIGTLFQQILIIANTTRKLDYSLLEAALTLGTSKFKLMMHVIIPGILPELYRDQRILLG 252 Query: 516 GAWNASIVSEV 526 AW IV+E+ Sbjct: 253 WAWTYLIVAEL 263 >gi|294101047|ref|YP_003552905.1| binding-protein-dependent transport systems inner membrane component [Aminobacterium colombiense DSM 12261] gi|293616027|gb|ADE56181.1| binding-protein-dependent transport systems inner membrane component [Aminobacterium colombiense DSM 12261] Length = 283 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 ++++ +SLL L A+++ + ++ PILD MQ++P +L +++F GKV Sbjct: 100 IASVFLSLLIGIPVGILMAEAKGVEPIVKPILDAMQTMPSFVYLIPAMMFF---GLGKV- 155 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 A+ A + + L +P+ +E + ++ + WQ + VP +MP Sbjct: 156 ----PAVLATLIYSLPPVIRLTNLGLKQVPQPAQEAAIAYGATKWQLLKEVRVPLAMPTI 211 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ MM++S M+VV ++I G+G + L+I D+ Sbjct: 212 MAGVNQTTMMALS----------MVVVA-SMIGARGLGQEVLLSINRIDV 250 >gi|238025063|ref|YP_002909295.1| amino acid ABC transporter permease [Burkholderia glumae BGR1] gi|237879728|gb|ACR32060.1| Amino acid ABC transporter, permease protein [Burkholderia glumae BGR1] Length = 238 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 8/88 (9%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + +I ++P L L + F IG E AI A+F + + +T + Y+ + N+P Sbjct: 82 VFNIGNTVPSLAVLAIALGIFG-------IG-EAPAIVALFLASLLPITRNAYEGMRNVP 133 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L E +R ++ WQ + +P ++P Sbjct: 134 AALREAARGIGMTPWQSLVRVELPNALP 161 >gi|119899803|ref|YP_935016.1| putative aliphatic sulfonates transport systempermease [Azoarcus sp. BH72] gi|119672216|emb|CAL96130.1| putative aliphatic sulfonates transport system,permease protein [Azoarcus sp. BH72] Length = 257 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 19/211 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 +A++T L ++ I+++F S + L P+L SIP + F+ VV+ Sbjct: 56 MHATQTFLTTMAGFGIAVVFGLALGAAVGSSPVVYKALYPLLVGFNSIPKVAFVPVLVVW 115 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F IG + AI F + + ++ L + +LE+V RS S Sbjct: 116 FG-------IG-TIPAILTAFLISFFPVVVNVATGLATLEPELEDVLRSLGASRLDILKK 167 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 +G+P +MP ++ ++++ + V SE TV GIG Y+ +A +A++ Sbjct: 168 VGLPRAMPYFFASLKVAITLAFVGSVISE------TVASNLGIG-YLMMAASSAMDMALV 220 Query: 243 YAMLTMLGV--IFLYDQLLF--RPMIVWSNK 269 +A L ++GV + +Y+ F R + W+++ Sbjct: 221 FAGLIVIGVMGVVMYELFAFVERRLTGWAHR 251 >gi|56808144|ref|ZP_00365928.1| COG0573: ABC-type phosphate transport system, permease component [Streptococcus pyogenes M49 591] gi|209559509|ref|YP_002285981.1| Phosphate transport system permease protein pstC [Streptococcus pyogenes NZ131] gi|209540710|gb|ACI61286.1| Phosphate transport system permease protein pstC [Streptococcus pyogenes NZ131] Length = 311 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|15598639|ref|NP_252133.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107102977|ref|ZP_01366895.1| hypothetical protein PaerPA_01004046 [Pseudomonas aeruginosa PACS2] gi|218890357|ref|YP_002439221.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254236397|ref|ZP_04929720.1| hypothetical protein PACG_02377 [Pseudomonas aeruginosa C3719] gi|254242129|ref|ZP_04935451.1| hypothetical protein PA2G_02858 [Pseudomonas aeruginosa 2192] gi|9949584|gb|AAG06831.1|AE004765_4 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126168328|gb|EAZ53839.1| hypothetical protein PACG_02377 [Pseudomonas aeruginosa C3719] gi|126195507|gb|EAZ59570.1| hypothetical protein PA2G_02858 [Pseudomonas aeruginosa 2192] gi|218770580|emb|CAW26345.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 262 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 19/204 (9%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R + +I I + +G G + Q++ P PLV+ + Sbjct: 62 AISGWRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVIL---W 118 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G E+A S+ ++G+ +R +ILPG Sbjct: 119 FGIDESAKI-FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S ++G+G + E VVL +L+ Sbjct: 178 PSILVGVRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYA 231 Query: 564 CF-------VLALNR--FLWHPLY 578 L R WHP Y Sbjct: 232 VLGKLADLAARGLERVWLRWHPAY 255 >gi|294668518|ref|ZP_06733615.1| choline transporter [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309481|gb|EFE50724.1| choline transporter [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 505 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+ +R ++ +I+Q+IP L L + + P +I L A+ IF + Sbjct: 42 ARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQN----- 96 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 Y L I + +++ +F LS WQ W + +P ++P ++ Sbjct: 97 ---TYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMI 136 >gi|317127949|ref|YP_004094231.1| binding-protein-dependent transporters inner membrane component [Bacillus cellulosilyticus DSM 2522] gi|315472897|gb|ADU29500.1| binding-protein-dependent transport systems inner membrane component [Bacillus cellulosilyticus DSM 2522] Length = 276 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 21/183 (11%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S+ L L PIL +Q IP++ V++F KV+ A L + F I + V Sbjct: 103 SKYLANSLYPILIGIQCIPMVSIAPILVIWFGYGLTTKVLLACLISFFPIVINAVVG--- 159 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 +++L +D+ + RS +S W+ F+YL +P ++P L + ++ VV + Sbjct: 160 --FRAL---DKDMHNLGRSIGISEWKIFYYLRLPNALPHLFGGFKVGIT---LAVVGA-- 209 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI----FLYDQLLFRPMIVW-- 266 +VG+ V G+G Y+ L + +++A L L +I F L+ R M+ W Sbjct: 210 -IVGEFVASERGLG-YLQLTANARLDTTLVFATLFALAIIGMLLFGIVHLIERMMMPWYH 267 Query: 267 SNK 269 +NK Sbjct: 268 ANK 270 Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 8/140 (5%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+ I I + ++++ + P + P P++V Y L + L+ L+ F Sbjct: 91 VIGIPLAISIVYSKYLANSLYPILIGIQCIPMVSIAPILVIWFGY-GLTTKVLLACLISF 149 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY----YVTGAITAC 514 + I+ N + G A D + S I+ W+ + Y+ LP P+ + G A Sbjct: 150 ---FPIVINAVVGFRALDKDMHNLGRSIGISEWKIFYYLRLPNALPHLFGGFKVGITLAV 206 Query: 515 GGAWNASIVSEVASWGHIHL 534 GA V+ G++ L Sbjct: 207 VGAIVGEFVASERGLGYLQL 226 >gi|167590155|ref|ZP_02382543.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ubonensis Bu] Length = 295 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 62/127 (48%), Gaps = 9/127 (7%) Query: 88 TLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 T A S R+G L+ +L M +P + L +++F L G ++ F + + Sbjct: 117 TSVAVSTRIGRDLLSMLTSMFNPLPSIALLPIALLWF-GLGTGSLL-------FVLVHAV 168 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 +W + +MY +P L R++ L+G ++ + VP ++P ++ + + + W Sbjct: 169 LWPLALNMYTGFLGVPATLRMAGRNYGLTGLRQVALILVPAALPSILAGLRVGWAFAWRT 228 Query: 207 VVASEMI 213 ++A+E++ Sbjct: 229 LIAAELV 235 >gi|163731450|ref|ZP_02138897.1| glycine betaine transporter, permease protein [Roseobacter litoralis Och 149] gi|161394904|gb|EDQ19226.1| glycine betaine transporter, permease protein [Roseobacter litoralis Och 149] Length = 344 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 31/152 (20%), Positives = 76/152 (50%), Gaps = 22/152 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S L ++VPILD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 176 SRSNTLQRIVVPILDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTDL 234 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + + D+ E + +F ++ QK W + +P ++P G+ +MMS++ Sbjct: 235 GIRL------VDPDVIEAADAFGMTKHQKLWGVQLPLALPNIMAGVNQTIMMSLA----- 283 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 284 -----MVVIA-SLVSAPGLGVLVLRGIRNLEL 309 >gi|332523506|ref|ZP_08399758.1| phosphate ABC transporter, permease protein PstC [Streptococcus porcinus str. Jelinkova 176] gi|332314770|gb|EGJ27755.1| phosphate ABC transporter, permease protein PstC [Streptococcus porcinus str. Jelinkova 176] Length = 311 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 6/167 (3%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIP--ILGFL 116 +LP + + +LSA+V + + S + G L+ P ++++ IP + GF+ Sbjct: 84 ALPMISGSFLVTILSALVATPFAIGAAVFMTEISPKYGAKLLQPAVELLVGIPSVVYGFI 143 Query: 117 TFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 V+ + ++ G G L+ + +F + +TF SL +PR E S + Sbjct: 144 GLQVIVPFIRTIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLKAVPRHYREASMAMGA 202 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ W + + + PG+ ++ M+ + +A +M+V V+P Sbjct: 203 TRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVGNSAVMP 249 >gi|327440082|dbj|BAK16447.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Solibacillus silvestris StLB046] Length = 256 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 32/165 (19%), Positives = 73/165 (44%), Gaps = 10/165 (6%) Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 G++ G + P+ L+ P +F P V++ + + +SL+ I G W + Sbjct: 80 GLFFGLNKRSREILMPYFHALSPIPPTLFIPYVIAILPTFQ---TASMSLIFI-GAFWPV 135 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 I G + + A S + G + ++LP P+ ++GA T+ G ++ ++ Sbjct: 136 FLGTIHGVLLIEKHYLDNAKSLGLKGPTFLLKVVLPASAPHILSGASTSLGMSFLILTIA 195 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 E+ ++G+G +I ++ + V+ G++ ++A+ Sbjct: 196 EMFG------ASSGMGFFIQYYSDFSQYHYVLAGIIFNSIIIVAI 234 >gi|303326087|ref|ZP_07356530.1| putative nitrate ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] gi|302864003|gb|EFL86934.1| putative nitrate ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] Length = 259 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 42/86 (48%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AE + IF F M + Y + + L + +RSF S Q+F+ + VP MP + Sbjct: 125 AEGSKIFICFVGAFVIMILNSYTGMRYVDPLLIDAARSFGASRSQQFFNVAVPACMPSIF 184 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTV 219 + S+S W V+A+EM+ + V Sbjct: 185 AGVQNSLSMAWMCVLAAEMVGAREGV 210 >gi|312195385|ref|YP_004015446.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EuI1c] gi|311226721|gb|ADP79576.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EuI1c] Length = 341 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 5/63 (7%) Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 M+ M GW ++ S ++V +TV LPG+G+Y+ A+ QD+ A+L +L ++GV+F+ Sbjct: 262 MLGMQFGW--MIGSALLV--ETVFGLPGVGTYLNQAVLSQDIFAVLGGVL-IIGVVFIVS 316 Query: 257 QLL 259 L+ Sbjct: 317 SLI 319 >gi|134100948|ref|YP_001106609.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] gi|133913571|emb|CAM03684.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] Length = 244 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R + +IA I +P+G+ IG+ +S + P +L A P+ V + Sbjct: 55 SLARSLAGFLIAVAIAVPLGVVIGWYGVVSDLLNPLLELFRNTAALALLPVFVLLLGLGE 114 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L++F W IL N I+G + A S + + ++LP + P Sbjct: 115 TSK----VSLIVFACTWPILLNTISGVRTVDPLLIKSARSMGFPPFPLFYKVVLPAVVPT 170 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A + + +E+A GLG I S P++ G++ + Sbjct: 171 VFTGIRLAGANSILVLVAAEMAG------ARAGLGYLINASQFNFQVPQMYAGIITISLL 224 Query: 566 VLALNRFL 573 L N+ L Sbjct: 225 GLGFNQAL 232 >gi|255523879|ref|ZP_05390843.1| binding-protein-dependent transport systems inner membrane component [Clostridium carboxidivorans P7] gi|296185930|ref|ZP_06854335.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255512441|gb|EET88717.1| binding-protein-dependent transport systems inner membrane component [Clostridium carboxidivorans P7] gi|296049198|gb|EFG88627.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 247 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 NV+ G A + E+AS + + + I LP I Y V+G + G W S+ SEV Sbjct: 137 NVLEGIKAVDKNLIEMASVYKVKNKYIIKDIYLPYIKHYIVSGVLMCLGMGWKVSVASEV 196 Query: 527 ASWGHIHLRTTGLGAYIAEST 547 S I + GL A+ST Sbjct: 197 LS---IPKYSIGLNLLNAKST 214 >gi|108802310|ref|YP_642507.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. MCS] gi|119871463|ref|YP_941415.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. KMS] gi|126438292|ref|YP_001073983.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. JLS] gi|108772729|gb|ABG11451.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. MCS] gi|119697552|gb|ABL94625.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. KMS] gi|126238092|gb|ABO01493.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. JLS] Length = 263 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 IG P + + P + A P+ P + + ++P + + L+ G W +L + Sbjct: 89 IGQLPIVEKTVSPTLEFARAIPSTALIPF---AMMLFGVSPEMKI-FLIALGCVWPVLLS 144 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 GA + +F+ITG + Y++LP + P + G Sbjct: 145 TADGARRLDSTMIASVRAFNITGLQRQWYVVLPAVLPRVLVG 186 >gi|330508590|ref|YP_004385018.1| ABC transporter permease [Methanosaeta concilii GP-6] gi|328929398|gb|AEB69200.1| ABC transporter, permease protein [Methanosaeta concilii GP-6] Length = 240 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 9/120 (7%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 + L + PI++I++ IP L ++ F +++F AA F IF V+ + + Sbjct: 70 KFLDSIFDPIVEILRPIPPLAWIPFAIIWFGI--------TNTAAGFIIFIGAVFPILTN 121 Query: 154 MYQSLCNIPRDLEEVSRSFRLS-GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 Y ++PR E ++ + Y+ +P+S+P + + ++M W +VA+EM Sbjct: 122 TYMGFKSLPRVYVESAKVLGATKDLDLIRYVALPYSLPSIAAGIRIAMGIAWMCLVAAEM 181 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 10/174 (5%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I +P+G+ +G+ + S P ++L P + P + ++ + N ++ Sbjct: 57 LIALPIGMIMGWFKFLDSIFDPIVEILRPIPPLAWIPF---AIIWFGIT-NTAAGFIIFI 112 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWWRYIILPGIFPYYVTGAITACGGA 517 G + IL N G + P + E A T RY+ LP P G A G A Sbjct: 113 GAVFPILTNTYMGFKSLPRVYVESAKVLGATKDLDLIRYVALPYSLPSIAAGIRIAMGIA 172 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 W + +E+ + GLG I +S EV + ++++ LA++R Sbjct: 173 WMCLVAAEM-----FGVSKNGLGFKIWDSYGHYRMDEVFMYMIVLGLLGLAIDR 221 >gi|304386236|ref|ZP_07368569.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] gi|304327593|gb|EFL94820.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] Length = 304 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 6/135 (4%) Query: 91 AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQ 146 A RR G+ L +++++ IP + GF+ TVV +++ G G LA + Sbjct: 113 ANKRRRGL-LQAVIELLVGIPSVVYGFVGLTVVVPALRSIFGGTGFGI-LAGALVLLVMI 170 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + +T SL +PR E S + + WQ + V S+PGL+ ++ M+ + Sbjct: 171 LPTVTAMYVDSLQAVPRHYREASLALGATRWQTISKVVVRASLPGLLTAIIFGMARAFGE 230 Query: 207 VVASEMIVVGDTVIP 221 +A +M++ V+P Sbjct: 231 ALAVQMVIGNAAVLP 245 >gi|251782472|ref|YP_002996774.1| phosphate transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391101|dbj|BAH81560.1| phosphate transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127360|gb|ADX24657.1| putative phosphate ABC transporter permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 311 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFIRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|228953120|ref|ZP_04115179.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229079976|ref|ZP_04212507.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock4-2] gi|229110236|ref|ZP_04239810.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock1-15] gi|229190884|ref|ZP_04317875.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus ATCC 10876] gi|228592552|gb|EEK50380.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus ATCC 10876] gi|228673222|gb|EEL28492.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock1-15] gi|228703355|gb|EEL55810.1| Glycine betaine transport system permease protein opuAB [Bacillus cereus Rock4-2] gi|228806535|gb|EEM53095.1| Glycine betaine transport system permease protein opuAB [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 187 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 LA+++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 24 LASQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGII----ASVIFAMPPT-- 77 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 78 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 132 Query: 204 WFFVVASEMIVVGDTVIPLPGIG 226 +VV +++ PG+G Sbjct: 133 ---------MVVTASLVGAPGLG 146 >gi|307155016|ref|YP_003890400.1| binding-protein-dependent transporter inner membrane component [Cyanothece sp. PCC 7822] gi|306985244|gb|ADN17125.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7822] Length = 286 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 24/140 (17%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-- 454 ++I+ +P+G+ IG + ++P L+ PA F PLV+ LW+ L Sbjct: 105 SAILGVPIGLLIGTFKTMEGLLEPILGLMRYMPAAAFIPLVI-----------LWVGLDE 153 Query: 455 -----LMIFGTQWYILFNVIAGASA---FPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 ++ GT +Y NV+ A A P+D +V+ + T + +I P P Sbjct: 154 PAKVTIIFLGTFFY---NVLMTADAVKFVPSDLIKVSYTLGATEKDIFFKVIFPATLPSI 210 Query: 507 VTGAITACGGAWNASIVSEV 526 + AWN IV+E+ Sbjct: 211 IDTLRINIASAWNFVIVAEL 230 >gi|190892647|ref|YP_001979189.1| spermidine/putrescine ABC transporter permease [Rhizobium etli CIAT 652] gi|190697926|gb|ACE92011.1| probable spermidine/putrescine ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 301 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%) Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157 I+ ++ IP+LG L + + M + P + + ++ A + A+ M ++ + Sbjct: 134 IIRMISWIPVLGRNGLVNSTLIEMGVIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 193 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L I R L E +R SGWQ W + +P + PG M+ G FVV M Sbjct: 194 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 245 Query: 218 TVIPLPGIGSYIALAIKEQ 236 + G + +AL +K Q Sbjct: 246 VQVMSGGQSASVALMMKNQ 264 >gi|298487238|ref|ZP_07005287.1| inner membrane component of a binding-protein-dependent transport system [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158262|gb|EFH99333.1| inner membrane component of a binding-protein-dependent transport system [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 277 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 17/188 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR L P ++SIP L ++ +++ KV+ + A F ++ + V Sbjct: 103 SREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPVYLNGV----- 157 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 ++ I R L EV + + S ++ + +P ++PGL + MS W F+VA+E+ Sbjct: 158 ---AAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAEL 214 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269 I G+G ++ + +L A++ + + L D LL + + W + Sbjct: 215 IAATK------GLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGLEKRFLAWRDT 268 Query: 270 FRLERTTG 277 F + G Sbjct: 269 FTGQSREG 276 >gi|325673723|ref|ZP_08153414.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|325555744|gb|EGD25415.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 272 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 12/173 (6%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IP+G+ +G + ++ L+ P + PL + + Y + ++ +IF Sbjct: 96 IPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPLTLLIIGYGDRS-----TIFLIFVAA 150 Query: 462 WY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 ++ IL N G + P E A+ + I++P +G A G +W Sbjct: 151 FFPILLNTTVGVAQVPQRLLEAAAMLGTPKAKTLYKIVIPSAMQSITSGLRIALGLSWVV 210 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +V E +TGLGA I ++ + ++ G++ + +RF+ Sbjct: 211 LVVGETVGI------STGLGAMITQARDMSRTDLIIAGMVFIGLAGFVTDRFM 257 >gi|227874222|ref|ZP_03992422.1| molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227839930|gb|EEJ50360.1| molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 231 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 KV+ + L + A + M + S +P+DL +V R+ LS + FW + +P S Sbjct: 93 KVVQSFLGCVLAATVISLPLMYRNAKASFALVPKDLVQVGRTLGLSETKIFWKIILPLSG 152 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 PG++ ++S + A+ M+ G+ I IAL +++QD Sbjct: 153 PGILSGAVLSFARALGEYGATSML-AGNIPGKTATISQRIALVMQDQD 199 >gi|153808289|ref|ZP_01960957.1| hypothetical protein BACCAC_02577 [Bacteroides caccae ATCC 43185] gi|149129192|gb|EDM20408.1| hypothetical protein BACCAC_02577 [Bacteroides caccae ATCC 43185] Length = 398 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 10/186 (5%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L PI++++ IP + GF V+ L+ V + LA + + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTE 271 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A M+ Sbjct: 272 DAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTG 331 Query: 216 GDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 VI PL I + IA + E Y L MLGV+ + L+ + + + Sbjct: 332 NAAVIPTTILEPLRTIPAIIAAELGEAPAGGPHYQALFMLGVVLFFITLIINFSVEYISS 391 Query: 270 FRLERT 275 L+R+ Sbjct: 392 KGLKRS 397 >gi|108760412|ref|YP_628319.1| putative aliphatic sulfonates ABC transporter permease [Myxococcus xanthus DK 1622] gi|108464292|gb|ABF89477.1| putative aliphatic sulfonates ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 253 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 34/186 (18%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+G+ I P + ++P L A P+ + PL + LW L T Sbjct: 74 VPLGLLISRIPFFRNAVKPVVMGLQALPSICWLPLAL-----------LWFGL-----TD 117 Query: 462 WYILFNVIAGA------------SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 ILF V+ G+ + VAS+ + G R+ ++LP P VTG Sbjct: 118 GAILFVVVMGSVLGIAIATEDSVNGVDPQLTRVASTLGVRGLRFQFGVLLPAALPGIVTG 177 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 AW A + G + + GLG + E P+V+ ++ + A+ Sbjct: 178 LKLGWSFAWRALLA------GELLFVSGGLGQLLTVGRELMDVPQVMAVMVAIVIIGTAV 231 Query: 570 NRFLWH 575 +R L+ Sbjct: 232 DRVLFQ 237 >gi|94994500|ref|YP_602598.1| phosphate transport system permease protein pstC [Streptococcus pyogenes MGAS10750] gi|139473687|ref|YP_001128403.1| phosphate ABC transporter permease [Streptococcus pyogenes str. Manfredo] gi|94548008|gb|ABF38054.1| Phosphate transport system permease protein pstC [Streptococcus pyogenes MGAS10750] gi|134271934|emb|CAM30172.1| putative phosphate ABC transporter permease protein [Streptococcus pyogenes str. Manfredo] Length = 311 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|307729436|ref|YP_003906660.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] gi|307583971|gb|ADN57369.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] Length = 280 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T S Q N+P L E SR F + WQ+ ++ +P ++P L + ++ + W +V Sbjct: 162 TLSTLQGFRNVPVTLIEASRVFGYTRWQRIVHVVLPCAVPTLATGVRLAFTKAWLALVVV 221 Query: 211 EMIVVGD 217 E++ + Sbjct: 222 ELVASSE 228 >gi|270290711|ref|ZP_06196935.1| phosphate ABC transporter, permease PstC [Pediococcus acidilactici 7_4] gi|270280771|gb|EFA26605.1| phosphate ABC transporter, permease PstC [Pediococcus acidilactici 7_4] Length = 304 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 6/135 (4%) Query: 91 AKSRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQ 146 A RR G+ L +++++ IP + GF+ TVV +++ G G LA + Sbjct: 113 ANKRRRGL-LQAVIELLVGIPSVVYGFVGLTVVVPALRSIFGGTGFGI-LAGALVLLVMI 170 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + +T SL +PR E S + + WQ + V S+PGL+ ++ M+ + Sbjct: 171 LPTVTAMYVDSLQAVPRHYREASLALGATRWQTISKVVVRASLPGLLTAIIFGMARAFGE 230 Query: 207 VVASEMIVVGDTVIP 221 +A +M++ V+P Sbjct: 231 ALAVQMVIGNAAVLP 245 >gi|222110194|ref|YP_002552458.1| binding-protein-dependent transport systems inner membrane component [Acidovorax ebreus TPSY] gi|221729638|gb|ACM32458.1| binding-protein-dependent transport systems inner membrane component [Acidovorax ebreus TPSY] Length = 400 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 29/175 (16%) Query: 73 LSAMVISLLFTFV----YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L+ ++ SLLF V + A S R P+LD MQ+ P +L V+ F Sbjct: 177 LALVLTSLLFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFVYLVPVVMLFGI--- 233 Query: 129 GKVIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + +FA+ ++ N+ L + DL E SR++ S Q W + +P Sbjct: 234 GNVPGVIVTIVFALPPLVRLTNL------GLRQVRPDLIEASRAYGASPLQLLWKVQLPL 287 Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +MP G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 288 AMPSIMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM 331 >gi|52549459|gb|AAU83308.1| ABC transporter permease protein [uncultured archaeon GZfos27E6] Length = 263 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 14/169 (8%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R V P+++I++ IP L ++ F +++ G + + AA F +F + + + Sbjct: 92 RAADRVFDPVVEILRPIPPLAWVPFAILW------GGL--SHYAAGFIVFIGAFFPILIN 143 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKF-WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 Y + + + ++ +K + PFS+P + + + M GW VVA+EM Sbjct: 144 TYTGFREVDKTYIDAAKVLGCKEERKLIKSVAFPFSLPYIATGIRIGMGVGWMCVVAAEM 203 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 V + G+G + ++ L A + +LG++ L+ LFR Sbjct: 204 FGVSKS-----GLGFRLFQVFWPLHMMDKLVAYMIILGLVALFLDRLFR 247 >gi|258542487|ref|YP_003187920.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256633565|dbj|BAH99540.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256636624|dbj|BAI02593.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256639677|dbj|BAI05639.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642733|dbj|BAI08688.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645788|dbj|BAI11736.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648841|dbj|BAI14782.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256654885|dbj|BAI20812.1| nitrate/sulfonate/bicarbonate transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 320 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 4/132 (3%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S+I +P+G+ G P ++ I+P PA F L V+ + Y P + Sbjct: 137 VISSLIGVPLGVLCGALPAMARLIEPSVDFFRYLPAPAFGALAVAILGIYD-APKI---A 192 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + + E A + G R +++PGI P Sbjct: 193 IIVIGTLFQQILVIANTTRKLDFALIEAARTLGARGLRLLFRVVIPGILPDLYRDQRILL 252 Query: 515 GGAWNASIVSEV 526 G AW IV+E+ Sbjct: 253 GWAWTYLIVAEL 264 >gi|225024938|ref|ZP_03714130.1| hypothetical protein EIKCOROL_01827 [Eikenella corrodens ATCC 23834] gi|224942269|gb|EEG23478.1| hypothetical protein EIKCOROL_01827 [Eikenella corrodens ATCC 23834] Length = 505 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+ +R ++ +I+Q+IP L L + + P +I L A+ IF + Sbjct: 42 ARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQN----- 96 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 Y L I + +++ +F LS WQ W + +P ++P ++ Sbjct: 97 ---TYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMI 136 >gi|297155273|gb|ADI04985.1| putative taurine transport system permease protein [Streptomyces bingchenggensis BCW-1] Length = 301 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 16/188 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+++ + + L R + L P+LD + +P L L F+N++ Sbjct: 104 TLQRVIAGYAVGTAAGYAVGLLMGAVRIVRAALEPLLDALYVVPKLALLPV----FLNMF 159 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G G ++A + VW S ++ + E + F WQ F ++ +P Sbjct: 160 -GLGEGPQIALVATTVFFFVW---ISTMAAVMGVAEGYREAGQVFGAGPWQMFRHVLLPA 215 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245 S+P ++ M ++ +VASE I + G+G I + A+ + D++ + Sbjct: 216 SLPQVLVGMRVAAGVAVLVIVASEQIAADN------GLGHLIFDSRALFQNDVMFVGIVC 269 Query: 246 LTMLGVIF 253 + +LGV+F Sbjct: 270 VAVLGVVF 277 >gi|227113234|ref|ZP_03826890.1| sulfate ester ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 531 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AG P E+A S + + RY+ILP + PY +TG A W A I E+ + Sbjct: 161 AGIQQTPQKLHEMARSLRLPPAAFLRYLILPAMLPYVMTGIRLAFSTGWVALIAVELLA- 219 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + GLG + +S + V + +LI+ A R L Sbjct: 220 -----SSEGLGYLLVQSRQLFMLDLVFVCILIIGVLGFAGERVL 258 >gi|218133139|ref|ZP_03461943.1| hypothetical protein BACPEC_01001 [Bacteroides pectinophilus ATCC 43243] gi|217992012|gb|EEC58016.1| hypothetical protein BACPEC_01001 [Bacteroides pectinophilus ATCC 43243] Length = 420 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 7/153 (4%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 Q Y+I + ++ R+ A + + G+ G+ + P + A P F Sbjct: 4 QKNTYIITMH--SLIRIFAGYTAAFVTAVLAGLAAGYVRAVRIMSAPLISAMQALPVTAF 61 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 LV+ N + ++ +++F ++ ++ G + ++A F+I G R Sbjct: 62 IILVLMIAGAK--NVSAVIAFIVVFPVVYH---GMVQGIDNMDKNLAQMADVFNIHGMRR 116 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 +RYI L PY T ++ G W A +EV Sbjct: 117 FRYISLMQCMPYIRTAVKSSAGMCWKAGAAAEV 149 >gi|168185827|ref|ZP_02620462.1| proline/glycine betaine ABC-type transport system, permease component fused to periplasmic component [Clostridium botulinum C str. Eklund] gi|169295930|gb|EDS78063.1| proline/glycine betaine ABC-type transport system, permease component fused to periplasmic component [Clostridium botulinum C str. Eklund] Length = 528 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 8/118 (6%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+++V+++L L ++ R+L ++ + +++Q++P L L F L P I Sbjct: 27 LASVVVAILIGVPLGILISRKRKLSGPIIGVANVIQAVPSLALLGF-------LIPILGI 79 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G+ A+F +F + + + Y L +I D+ E + L+ QK + +P +MP Sbjct: 80 GST-PAVFMVFLYSLLPIIKNTYIGLSSINPDMLEAAEGMGLTPGQKLKMVQLPLAMP 136 >gi|94988688|ref|YP_596789.1| phosphate transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94992511|ref|YP_600610.1| phosphate ABC transporter permease [Streptococcus pyogenes MGAS2096] gi|94542196|gb|ABF32245.1| phosphate transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94546019|gb|ABF36066.1| Phosphate transport system permease protein pstC [Streptococcus pyogenes MGAS2096] Length = 311 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|49083004|gb|AAT50902.1| PA3443 [synthetic construct] Length = 263 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 19/204 (9%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R + +I I + +G G + Q++ P PLV+ + Sbjct: 62 AISGWRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVIL---W 118 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G E+A S+ ++G+ +R +ILPG Sbjct: 119 FGIDESAKI-FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S ++G+G + E VVL +L+ Sbjct: 178 PSILVGVRFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYA 231 Query: 564 CF-------VLALNR--FLWHPLY 578 L R WHP Y Sbjct: 232 VLGKLADLAARGLGRVWLRWHPAY 255 >gi|295680512|ref|YP_003609086.1| binding-protein-dependent transporters inner membrane component [Burkholderia sp. CCGE1002] gi|295440407|gb|ADG19575.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] Length = 277 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 8/111 (7%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +L ++++IP + + VV+F IG E++ + I + + M S Y ++ I Sbjct: 120 VLQMLRTIPFIALVPIFVVWFG-------IG-EVSKVALIVGAAISPMYLSTYHAIRGID 171 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L E+ R+FRL+ + + +P S+PG++ + + + +VA+E I Sbjct: 172 PKLLELGRTFRLTRAHQVRLIILPMSLPGILVGVRYAAAISLLALVAAEQI 222 >gi|260462558|ref|ZP_05810765.1| choline ABC transporter, permease protein [Mesorhizobium opportunistum WSM2075] gi|259031754|gb|EEW33023.1| choline ABC transporter, permease protein [Mesorhizobium opportunistum WSM2075] Length = 284 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 37/179 (20%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA ++ +++P+LD+MQ++P +L + F + PG ++ IF I T+ Sbjct: 122 AAHKPKVYRIMLPVLDLMQTLPTFVYLIPVLTLFGLGNAPGLIV----TIIFVIPTAVRL 177 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 + + ++P+ + E +F + Q W + +P ++P GL ++M+S+S Sbjct: 178 T-----HLGVVSVPKSIIEAGEAFGATKSQLLWKVELPSALPTIMAGLTQSIMLSLS--- 229 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDL----------LAILYAMLTMLGV 251 VV + +I G G+G+ I AL + DL LAI+ +T +GV Sbjct: 230 -MVVFAALIGAG-------GLGTEINRALGSRRIDLGLEAGLAIVVLAIVLDRMTRIGV 280 >gi|218513147|ref|ZP_03509987.1| probable spermidine/putrescine ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 203 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%) Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157 I+ ++ IP+LG L + + M + P + + ++ A + A+ M ++ + Sbjct: 51 IIRMISWIPVLGRNGLVNSTLIEMGVIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 110 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L I R L E +R SGWQ W + +P + PG M+ G FVV M Sbjct: 111 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 162 Query: 218 TVIPLPGIGSYIALAIKEQ 236 + G + +AL +K Q Sbjct: 163 VQVMSGGQSASVALMMKNQ 181 >gi|282857473|ref|ZP_06266705.1| putative binding-protein-dependent transport systems inner membrane component [Pyramidobacter piscolens W5455] gi|282584692|gb|EFB90028.1| putative binding-protein-dependent transport systems inner membrane component [Pyramidobacter piscolens W5455] Length = 257 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/149 (20%), Positives = 64/149 (42%), Gaps = 14/149 (9%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS--LLMIFGTQ 461 VG +G + + P + + P+ + P + L P+ W + L+++GT Sbjct: 81 VGTVLGMNERLRDALYPVIYMFSVVPSILLSPFAL------LLAPDFWSASVFLIVYGTV 134 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W LF I G + + A++ + G++ +ILP P + G + + + Sbjct: 135 WSTLFAAITGIMTIDKRYLDKAATLELKGFKRLVKVILPAASPAILAGFVNSLRSTFVML 194 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + SE+ +G + G+G ++ + E G Sbjct: 195 VYSEM--YGAQY----GMGFFVKKYAEFG 217 >gi|229122458|ref|ZP_04251671.1| aliphatic sulfonates transport permease protein ssuC [Bacillus cereus 95/8201] gi|228661019|gb|EEL16646.1| aliphatic sulfonates transport permease protein ssuC [Bacillus cereus 95/8201] Length = 282 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 10/180 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++FR I + I +G +GF + P Q+L P PL V + Sbjct: 83 SISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPLFVLWFGF 142 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ G + + N G + +VA + + +ILP Sbjct: 143 GETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITKLILPAKL 198 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + GA + G AW + +V+E+ T G+G I ++ + + V +G++I Sbjct: 199 PNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFA 252 >gi|306827280|ref|ZP_07460567.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus pyogenes ATCC 10782] gi|304430427|gb|EFM33449.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus pyogenes ATCC 10782] Length = 311 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|282855801|ref|ZP_06265106.1| sulfate transport system permease protein [Pyramidobacter piscolens W5455] gi|282586368|gb|EFB91631.1| sulfate transport system permease protein [Pyramidobacter piscolens W5455] Length = 280 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 19/163 (11%) Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL--- 436 +W+ C+ RV + ++ +P+GI +G ++ + ++L P + PL Sbjct: 64 VWISCL---RVFGGYMAGLMLALPLGILMGHYKLVNRLLGSLVEILRPMPPLSWIPLLLA 120 Query: 437 ---VVSCVSYYHLNPNLWLSLL----------MIFGTQWYILFNVIAGASAFPNDFKEVA 483 V S + + + W LL + G + IL N + G S P + A Sbjct: 121 WFGVASLATLFGVEEGEWYILLNSIKFTMLIVIFIGAFFPILLNTVHGVSGVPATLIDSA 180 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 + + ++LPG P VTG GGAW + +E+ Sbjct: 181 RVLGASERDIFFKVLLPGAAPSIVTGMRLGLGGAWMCLVAAEM 223 >gi|182416935|ref|ZP_02948319.1| taurine transport system permease protein TauC [Clostridium butyricum 5521] gi|237667333|ref|ZP_04527317.1| taurine transport system permease protein TauC [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379233|gb|EDT76734.1| taurine transport system permease protein TauC [Clostridium butyricum 5521] gi|237655681|gb|EEP53237.1| taurine transport system permease protein TauC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 262 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 24/195 (12%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M R+V+ I+A+I IP+G+ G+ I + +P + P ++ L+V Sbjct: 71 SMERLVIAYILAAITAIPLGLASGYNSKIRAVFEPIIEFYRPLPPLAYYTLLV------- 123 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW+ + L+ + I + ++ +D+ A + + +RY+I Sbjct: 124 ----LWMGIDNKSKITLLFLASFAPIYISCMSSVLKIKSDYIYSAYTVGANKHQIFRYVI 179 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P P G TA G A+ + +E+ + +G+G + ++++ + +G Sbjct: 180 FPSCLPDIFVGLRTAIGVAYTTLVAAEMVA------AVSGIGWMVLDASKYLRSDIIFVG 233 Query: 559 VLIMCCFVLALNRFL 573 + IM + L++ + Sbjct: 234 IAIMGITGILLDKII 248 >gi|329115943|ref|ZP_08244660.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus parauberis NCFD 2020] gi|326906348|gb|EGE53262.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus parauberis NCFD 2020] Length = 575 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ T + N Sbjct: 120 AKNSTVRNIVNPILDFMQTMPAFVYLIPAVAFF---GIGMVPGVFASVIFALPPTVRFTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + I +L E + SF + QK + + +P + M G+ MM+++S Sbjct: 177 L------GIREISTELVEAADSFGSTSKQKLFKVELPLAKNTIMAGINQTMMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V G ++I PG+G + A++ D+ Sbjct: 227 ------MVVTG-SMIGAPGLGRKVLSALQHADI 252 >gi|317480354|ref|ZP_07939455.1| phosphate ABC transporter [Bacteroides sp. 4_1_36] gi|316903529|gb|EFV25382.1| phosphate ABC transporter [Bacteroides sp. 4_1_36] Length = 394 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 11/185 (5%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIF 140 +Y + A S+ + L PI++++ IP + GF V+ + ++ V + LA Sbjct: 198 IYMSEVANSQVRNL-LKPIIELLSGIPSVVYGFFGLIVIVPFLQQVFNLPVGESGLAGSI 256 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 + + + ++ N PR + E S + S WQ + + +P+S+ G+ +++ + Sbjct: 257 VLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGI 316 Query: 201 SGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 +A M+ VI PL I + IA + E Y L +LGV+ Sbjct: 317 GRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLF 376 Query: 255 YDQLL 259 + LL Sbjct: 377 FISLL 381 >gi|269963034|ref|ZP_06177371.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832277|gb|EEZ86399.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 299 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 25/172 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R+ V+ P+LD+MQ++P +L V M L GK+ G I+AI ++ N Sbjct: 129 ARSNRVQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ + +P +MP G+ +MM++S Sbjct: 186 LGIRL------VDKEVLEAATAFGASKKQRLVGVQLPLAMPTIMAGINQTIMMALS---- 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 M+V+ ++I + G+G + +I Q L L ++ + L+D+ Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|148238699|ref|YP_001224086.1| ABC-type glycine betaine/L-proline transport system permease protein ProW [Synechococcus sp. WH 7803] gi|147847238|emb|CAK22789.1| ABC-type glycine betaine/L-proline transport system permease protein ProW [Synechococcus sp. WH 7803] Length = 298 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 22/149 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +++A +++L+ L+A+ + V+ P LD+MQ++P +L V+ F Sbjct: 101 VITASLLALVIGLPLGILSARYSSVWRVVRPCLDLMQTMPAFVYLIPAVMLFST------ 154 Query: 132 IGAELAAIFAIFTSQVWNM--TFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 A+ +I + +++M + Q L +P DL E RSF S Q W + +P + Sbjct: 155 -----GAVPSILATLIFSMPPVVRLTQLGLSQVPADLIEAGRSFGCSERQLLWKVQMPSA 209 Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMI 213 +P G+ +M+++S VV + MI Sbjct: 210 LPTVMTGVNQTIMLALS----MVVIASMI 234 >gi|19746173|ref|NP_607309.1| phosphate ABC transporter [Streptococcus pyogenes MGAS8232] gi|19748353|gb|AAL97808.1| putative phosphate ABC transporter [Streptococcus pyogenes MGAS8232] Length = 311 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|311070951|ref|YP_003975874.1| glycine betaine ABC transporter permease [Bacillus atrophaeus 1942] gi|310871468|gb|ADP34943.1| glycine betaine ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 282 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 15/146 (10%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 A++ + ++ PILD+MQ++P +L ++F N+ G V G + IFA+ Sbjct: 115 ASQKESVRRIVTPILDLMQTMPAFVYL-LPAIFFFNI--GVVPGVVASVIFAM--PPTIR 169 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 MT + +P DL E + +F + Q+ + + +P + ++ + S+ ++A Sbjct: 170 MT---VLGIKQVPADLIEATEAFGSTTSQRLFKVQLPLATKTILAGINQSI------MLA 220 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKE 235 M+V+ ++ PG+GS + A+ + Sbjct: 221 LSMVVIA-AMVGAPGLGSEVYSAVTQ 245 >gi|304404131|ref|ZP_07385793.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304347109|gb|EFM12941.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 265 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 15/137 (10%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ G + I N + G A E+ ++ + G+ +R II PG P + G A Sbjct: 135 LVALGVAFPIYLNTLHGIRAVDPGLIEMGRTYGLRGFSLFRTIIFPGALPSILVGLRFAL 194 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF--------- 565 G W IVSE S +G+G + E VVL ++I Sbjct: 195 GIMWITLIVSETIS------ANSGIGYMAMNAREFFQMDIVVLSIVIYALLGKLSDWIAK 248 Query: 566 VLALNRFLWHPLYLYGT 582 V+ + WHP Y G Sbjct: 249 VMERSWLQWHPHYRKGK 265 >gi|149198798|ref|ZP_01875841.1| 2-isopropylmalate synthase-like protein [Lentisphaera araneosa HTCC2155] gi|149138234|gb|EDM26644.1| 2-isopropylmalate synthase-like protein [Lentisphaera araneosa HTCC2155] Length = 505 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 19/185 (10%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQ-----------LLAAFPANVFFPLVVSCVSYY 444 +A++I IP+GI G P I + + P Q L+ + F + Sbjct: 305 LAAVIAIPMGILCGLSPSIMTALNPLIQTFRPVSPLAWVLITIQIIDGIFVGDKALTGEI 364 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 N L + + + W L N G S+ D VA + + I++P P Sbjct: 365 LKNTFLHAGITVALCSMWATLSNTALGVSSVDPDHMNVAKVLKLNWFDRIFKIVIPSAIP 424 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG G W IV+E+ + GLG +I + + L +I+C Sbjct: 425 YIFTGLRITLGVGWMVLIVAEMMATSR------GLGWFIDQEYQNNKVES--LANIIVCI 476 Query: 565 FVLAL 569 F++ L Sbjct: 477 FIIGL 481 >gi|330836323|ref|YP_004410964.1| binding-protein-dependent transport systems inner membrane component [Spirochaeta coccoides DSM 17374] gi|329748226|gb|AEC01582.1| binding-protein-dependent transport systems inner membrane component [Spirochaeta coccoides DSM 17374] Length = 271 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P ++ A P F L + + + P +++LM+ W NV G Sbjct: 111 VRPAIGIIKAAPVTSFIILALFWLGRESVAP--LITMLMVLPIVWG---NVTEGLGTLDR 165 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 + +A ++ + R++I+P + PY++ +A G AW A I +E+ Sbjct: 166 NLMVMARTYRFGRGKTLRFVIVPSLMPYFIAALSSAIGFAWKAGIAAEL 214 >gi|226360717|ref|YP_002778495.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226239202|dbj|BAH49550.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 273 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 10/160 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 + + + GI+ +P + I ++ +AS T L +SLL + A L Sbjct: 41 VYVTVSGIRPQVLPSPLRVIQQGWRARDAISGHASATLQVTLIGFAVSLLCAWALAVLVD 100 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150 S L VP+ + Q++PI+ +++F L P KV+ LA F M Sbjct: 101 FSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KVLVIALATFF--------PM 151 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 T + + R+ + RS S WQ+F Y+ +P ++P Sbjct: 152 TIGLIEGFAAADREAGALLRSMGASRWQEFRYVRLPSAIP 191 >gi|15675204|ref|NP_269378.1| putative phosphate ABC transporter permease [Streptococcus pyogenes M1 GAS] gi|94990578|ref|YP_598678.1| phosphate ABC transporter permease [Streptococcus pyogenes MGAS10270] gi|13622371|gb|AAK34099.1| putative phosphate ABC transporter (permease protein) [Streptococcus pyogenes M1 GAS] gi|94544086|gb|ABF34134.1| Phosphate transport system permease protein pstC [Streptococcus pyogenes MGAS10270] Length = 311 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 182 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 183 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 242 Query: 215 VGDTVIP 221 V+P Sbjct: 243 GNSAVMP 249 >gi|26986982|ref|NP_742407.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida KT2440] gi|24981597|gb|AAN65871.1|AE016215_6 sulfonate ABC transporter, permease protein SsuC [Pseudomonas putida KT2440] Length = 265 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 84/178 (47%), Gaps = 19/178 (10%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207 Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D++ + + +LG I L + L R + W +++ R G Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKIADLAARGLERVWLRWHPAYQVARKEG 264 >gi|239928177|ref|ZP_04685130.1| transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291436507|ref|ZP_06575897.1| ABC transporter permease protein [Streptomyces ghanaensis ATCC 14672] gi|291339402|gb|EFE66358.1| ABC transporter permease protein [Streptomyces ghanaensis ATCC 14672] Length = 296 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 8/182 (4%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +I P+G+ + + + I P L + P+ + P V + LN N + ++ Sbjct: 108 ALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVP---PAVIWLGLN-NQMMYAVI 163 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G I +++G P F + TG + +I+LP P YV G Sbjct: 164 LLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAF 223 Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 +W + + +E +AS+ + + GLG + V +L++ +A++ ++ Sbjct: 224 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILTVGIAIDLLIFS 280 Query: 576 PL 577 PL Sbjct: 281 PL 282 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 14/203 (6%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L +LL L A+ + + + PIL +QS+P + ++ V++ Sbjct: 100 RGLLGFFFALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVIW-------- 151 Query: 131 VIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 +G ++A I V ++ + + +P R+ +G + W++ +P ++ Sbjct: 152 -LGLNNQMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAAL 210 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 PG V + + W ++A+E+I D + G+G + D+ + A+L + Sbjct: 211 PGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLI 267 Query: 249 LGVIFLYDQLLFRPMIVWSNKFR 271 L V D L+F P+ W + R Sbjct: 268 LTVGIAIDLLIFSPLERWVLRGR 290 >gi|227823101|ref|YP_002827073.1| putative ABC transporter, permease protein; putative aliphatic sulfonates transporter [Sinorhizobium fredii NGR234] gi|227342102|gb|ACP26320.1| putative ABC transporter, permease protein; putative aliphatic sulfonates transporter [Sinorhizobium fredii NGR234] Length = 278 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/211 (21%), Positives = 75/211 (35%), Gaps = 33/211 (15%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R + +++ I + +GI G Q+L P PLV+ Sbjct: 83 AVSGARALAGLVVGGTIGLALGIANGISKLSEQLTDTSLQMLRTIPHLAMIPLVI----- 137 Query: 444 YHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 LW + L G + I N G + E+ + + GW +R Sbjct: 138 ------LWFGIGEESKLFLTSLGVLFPIYLNTFHGVRNVDRELIEMGRIYGMNGWTLFRK 191 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILPG P G A G W IVSE + ++G+G ++ E VV Sbjct: 192 VILPGALPSIFVGLRYALGIMWLTLIVSESIA------ASSGIGHMANQAREFMMTDVVV 245 Query: 557 LGVLIMCCF---------VLALNRFLWHPLY 578 L +LI + + W+P+Y Sbjct: 246 LSLLIYAALGKLADVIARSMERHALSWNPVY 276 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 8/116 (6%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L ++++IP L + +++F K+ L +F I+ + + + N+ R Sbjct: 121 LQMLRTIPHLAMIPLVILWFGIGEESKLFLTSLGVLFPIY--------LNTFHGVRNVDR 172 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +L E+ R + ++GW F + +P ++P + + ++ W ++ SE I + Sbjct: 173 ELIEMGRIYGMNGWTLFRKVILPGALPSIFVGLRYALGIMWLTLIVSESIAASSGI 228 >gi|262203356|ref|YP_003274564.1| binding-protein-dependent transporter inner membrane component [Gordonia bronchialis DSM 43247] gi|262086703|gb|ACY22671.1| binding-protein-dependent transport systems inner membrane component [Gordonia bronchialis DSM 43247] Length = 291 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 NV AG E A S +T R+IILPG P + G A G W +V+E Sbjct: 174 NVFAGIRNVDQKLIEAARSLDLTRIEMLRFIILPGALPQTLVGLRQALGIGWLVLVVAE- 232 Query: 527 ASWGHIHLRTTGLGAYIAESTE 548 + T GLG + ++ E Sbjct: 233 -----MQTTTVGLGFIMNDAKE 249 >gi|311696188|gb|ADP99061.1| binding-protein-dependent transport systems inner membrane component [marine bacterium HP15] Length = 344 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/148 (19%), Positives = 75/148 (50%), Gaps = 14/148 (9%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S L +++P+LD++Q++P +L +++ ++ K+ G + + ++ N+ Sbjct: 177 ARSNSLQRMIIPVLDMLQTLPPFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTNL 235 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + +D+ E + +F ++ QK + + +P ++P + M+G ++ S Sbjct: 236 GIRL------VDKDVIEAADAFGMTPRQKLYKVQIPLALPNI-------MAGVNQTIMMS 282 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +VV +++ PG+G + I+ +L Sbjct: 283 LAMVVIASLVSAPGLGVLVLRGIRNLEL 310 >gi|218529259|ref|YP_002420075.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|218521562|gb|ACK82147.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 293 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 14/162 (8%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 IG P + + + P Q+L P + PL + + L+ G + IL N Sbjct: 123 IGRVPLVRALLDPVLQILRPIPVTAWLPLAMILFGLGATS----AFFLVFLGAFYPILVN 178 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G + E A+ TG + ++LP P TG G AW +V E+ Sbjct: 179 TVFGVRSVEPRLFEAAAMLGCTGPAQFLRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMT 238 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVV---LGVLIMCCFV 566 TGLGA I E+ + S E+V +GV+ + FV Sbjct: 239 G------VQTGLGAVIMEARQL-SRTEIVICGMGVIGVAGFV 273 >gi|145596388|ref|YP_001160685.1| binding-protein-dependent transport systems inner membrane component [Salinispora tropica CNB-440] gi|145305725|gb|ABP56307.1| binding-protein-dependent transport systems inner membrane component [Salinispora tropica CNB-440] Length = 282 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 6/142 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY- 443 IT VV +++++ + +GI + H+ P + A P PL+V VS+ Sbjct: 86 ITTLMTVVGFLLSAVAGVLIGIALAASRHLERMFAPLLVAVNAVPKIALGPLLV--VSFG 143 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P L + L+ F + I+ + G + P D E+A S H + W+ +R + P Sbjct: 144 WGAKPILTMVFLLCF---FPIVLSTATGLTTTPADLAELARSLHASWWQSFRKVRFPAAL 200 Query: 504 PYYVTGAITACGGAWNASIVSE 525 P G A A +++ E Sbjct: 201 PQVFVGLKVAMPLAAIGAVIGE 222 >gi|303252519|ref|ZP_07338682.1| spermidine/putrescine ABC transporter membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302648487|gb|EFL78680.1| spermidine/putrescine ABC transporter membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 215 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ S +Q+F + +P Sbjct: 73 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGASAFQRFVRVTIPL 132 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P IG+ I + A+ A+ Sbjct: 133 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 186 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 187 SIALTVLMALMLY--VYYRANKLLNKKVELE 215 >gi|227818437|ref|YP_002822408.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227337436|gb|ACP21655.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 278 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 10/112 (8%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I N G A P EV ++F R R I+LP PY + G A G A A I+ Sbjct: 156 ICINTWVGVKAVPRTLVEVGTAFCAPQSRIMRQIVLPATLPYIMAGLRLAIGKAVIAMII 215 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA--LNRFL 573 +E + +GLG I + SF + V I+C +LA L+R + Sbjct: 216 AEFLT------AISGLGGIIINAAN--SFRTAEMFVPIICVMILAVVLDRLV 259 >gi|327439348|dbj|BAK15713.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Solibacillus silvestris StLB046] Length = 272 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/172 (20%), Positives = 81/172 (47%), Gaps = 9/172 (5%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 +V + I D +L Y + LR+L+ + LL + L ++ + + P+++ + Sbjct: 62 LVGAIEIASD-GTLFLYMGYSFLRVLAGWTLGLLIAVPFGLLIGTNKFVRALFEPVINFV 120 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + IP L F+T +++F IG E + +F I + + +T + + +I D Sbjct: 121 RFIPPLAFITLFMLWFG-------IG-EQSKVFLIVYATFFVITINTLTGVLSISNDKLL 172 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 ++S S +Q Y+ +P ++P + ++M + +V +EM+ + + Sbjct: 173 SAKSMGASKFQTLIYVVIPATIPYIFTGAKLAMGSSFMAIVGAEMVAANEGI 224 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 18/137 (13%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL---- 454 +I +P G+ IG + + +P + P F L + LW + Sbjct: 94 LIAVPFGLLIGTNKFVRALFEPVINFVRFIPPLAFITLFM-----------LWFGIGEQS 142 Query: 455 ---LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 L+++ T + I N + G + ND A S + ++ Y+++P PY TGA Sbjct: 143 KVFLIVYATFFVITINTLTGVLSISNDKLLSAKSMGASKFQTLIYVVIPATIPYIFTGAK 202 Query: 512 TACGGAWNASIVSEVAS 528 A G ++ A + +E+ + Sbjct: 203 LAMGSSFMAIVGAEMVA 219 >gi|288958181|ref|YP_003448522.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] gi|288910489|dbj|BAI71978.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] Length = 250 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 19/173 (10%) Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 ++ +++ IP + ++ F +++F +E AA F I + W ++ Y ++ + Sbjct: 96 VVRMLRPIPAIAWIPFAIIWFGV--------SEGAASFLIALTVFWINYYASYAAVRGVD 147 Query: 163 RDLEEVSRSFRLSGW-QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +DL E+ +F G + + + +P ++PG++ + + GW VVA+E+ Sbjct: 148 KDLIELGYAFGQGGLVPRLFKIILPGALPGILSGLRAGLGQGWMTVVAAEL-------FG 200 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 + G+G + ++ LLA +L M+ + LY F M V S +R Sbjct: 201 ISGLGMRM---MEASGLLATHIVVLYMVTIALLYGVSDFLFMQVQSRVLSWQR 250 >gi|146311577|ref|YP_001176651.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] gi|145318453|gb|ABP60600.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] Length = 245 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 10/100 (10%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150 +R + ++ I ++ ++P L L +V V+G + AI A+F + + + Sbjct: 80 AARGVAEYVMQIFNVGNTLPPLAVLALAMV---------VLGIGDKPAIVALFLASLLPI 130 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + Y LC++P L E + ++ WQ+ + + +P ++P Sbjct: 131 VRNTYAGLCSVPASLLEAANGIGMTKWQRLYQVEIPNALP 170 >gi|149182051|ref|ZP_01860536.1| ABC transporter (permease) [Bacillus sp. SG-1] gi|148850230|gb|EDL64395.1| ABC transporter (permease) [Bacillus sp. SG-1] Length = 251 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 25/206 (12%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPG 129 R+ + I+LL L AKS+ L +L QS+P + +L +++F MN Sbjct: 61 RLFIGLGIALLIGTSIGVLLAKSKTADDTLGSLLLAFQSVPSIVWLPLAIMWFGMN---- 116 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E A IF + + M ++ + N+P +++ G F + +P S+ Sbjct: 117 -----ETAVIFVVVLGGTFVMALNIRTGIKNVPPLFTRAAQTMGSKGIDLFIRVTLPASV 171 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P V ++ + W ++A E++ G PG+G + A D+ ++ M+ + Sbjct: 172 PYAVTGARLAWAFAWRALMAGELLSTG------PGLGYTLRYASDFGDMSLVIGVMIIIG 225 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERT 275 + + DQL+F R+ER+ Sbjct: 226 VIGAIVDQLIFS---------RIERS 242 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 4/142 (2%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+ + + IA +I +G+ + + + P+ V+ PL + ++ +N Sbjct: 61 RLFIGLGIALLIGTSIGVLLAKSKTADDTLGSLLLAFQSVPSIVWLPL---AIMWFGMNE 117 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + +++ G + + N+ G P F A + G + + LP PY VT Sbjct: 118 TAVI-FVVVLGGTFVMALNIRTGIKNVPPLFTRAAQTMGSKGIDLFIRVTLPASVPYAVT 176 Query: 509 GAITACGGAWNASIVSEVASWG 530 GA A AW A + E+ S G Sbjct: 177 GARLAWAFAWRALMAGELLSTG 198 >gi|77461460|ref|YP_350967.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77385463|gb|ABA76976.1| putative glycine betaine/L-proline ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 287 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 95/205 (46%), Gaps = 25/205 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T +++ A ++ ++ +AA ++ P+LD+MQ++P +L T+ Sbjct: 95 QETMETLAQVMFATLVCVVIGVPLGIVAAHKPMFYTLMRPVLDLMQTVPTFVYLIPTLTL 154 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + +FAI + +T Y + ++P++L + ++F S Q Sbjct: 155 FGLGVVPGLIS----TVVFAI--AAPIRLT---YLGIRDVPQELMDAGKAFGCSRRQLLS 205 Query: 182 YLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +MP G+ +M+S+S M+V+ ++ G+G + A+ D Sbjct: 206 RIELPHAMPSIAAGITQCIMLSLS----------MVVIA-ALVGADGLGKPVVNALNTAD 254 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRP 262 + A L ++ + + D++ +P Sbjct: 255 IALGFEAGLAIVLLAIMLDRICKQP 279 >gi|158314114|ref|YP_001506622.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EAN1pec] gi|158109519|gb|ABW11716.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EAN1pec] Length = 281 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 35/220 (15%) Query: 45 PRDIVDIVPITLDVHSLPQYASR---TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +VD+ LD H+L Q +T L+ + IS++ A L +++R + + Sbjct: 61 PHAVVDVA--FLDRHNLEQLLRALWLSTSVALTGLGISIVLGMALAVLMSQARWIERSVY 118 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P I+Q+IP L + +F + +VI L A+F I +S ++ L ++ Sbjct: 119 PYAVILQTIPTLAMVPLIGFWFHYGFVSRVIVCVLIALFPIISSTLFG--------LQSV 170 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 R + ++ R+ W L +P ++P + SG F V++ + VVG V Sbjct: 171 DRGMLDLFALHRVPRWVLLVKLRLPAALPA-------TFSG---FQVSAGLAVVGAVVGD 220 Query: 222 L------PGIGS----YIALAIKEQDLLAILYAMLTMLGV 251 PGIG Y A + EQ L A++ A ++LGV Sbjct: 221 FFFKQGDPGIGVLIDLYRARLMTEQLLGAVILA--SLLGV 258 >gi|95928883|ref|ZP_01311629.1| binding-protein-dependent transport systems inner membrane component [Desulfuromonas acetoxidans DSM 684] gi|95135228|gb|EAT16881.1| binding-protein-dependent transport systems inner membrane component [Desulfuromonas acetoxidans DSM 684] Length = 269 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 5/114 (4%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I NV G + A + +R ++LPG P+ ++G G +W + Sbjct: 147 IAINVAGGVKRVDEMYIRAARMLGLNNRMLFRSVLLPGALPHILSGLRVGLGSSWRVLVA 206 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 +E+ + R TGLG I +S F + + + I+C L + R ++ PL Sbjct: 207 AEM-----VVGRGTGLGYAIIQSRWTLDFAKAFVCIAIICGIGLIMERVIFIPL 255 >gi|302557597|ref|ZP_07309939.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000] gi|302475215|gb|EFL38308.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000] Length = 304 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 8/182 (4%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +I P+G+ + + + I P L + P+ + P V + LN N + ++ Sbjct: 116 ALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVP---PAVIWLGLN-NQMMYAVI 171 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G I +++G P F + TG + +I+LP P YV G Sbjct: 172 LLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAF 231 Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 +W + + +E +AS+ + + GLG + V +L++ +A++ ++ Sbjct: 232 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILTVGIAIDLLIFS 288 Query: 576 PL 577 PL Sbjct: 289 PL 290 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 14/195 (7%) Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 +LL L A+ + + + PIL +QS+P + ++ V++ +G Sbjct: 116 ALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVIW---------LGLNNQM 166 Query: 139 IFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 ++A I V ++ + + +P R+ +G + W++ +P ++PG V + Sbjct: 167 MYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLK 226 Query: 198 MSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + W ++A+E+I D + G+G + D+ + A+L +L V D Sbjct: 227 QGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILTVGIAID 283 Query: 257 QLLFRPMIVWSNKFR 271 L+F P+ W + R Sbjct: 284 LLIFSPLERWVLRSR 298 >gi|222102603|ref|YP_002539642.1| ABC transporter [Agrobacterium vitis S4] gi|221739204|gb|ACM39937.1| ABC transporter [Agrobacterium vitis S4] Length = 282 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 14/141 (9%) Query: 379 VIWLGCITM------FRVVVLIIIAS----IIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 V LGC M + L+I A+ +I IPVGI GF ++P L+ Sbjct: 77 VAMLGCTVMGLWAETMSTLALVITATFMALVIGIPVGIVAGFVQAFDKIVEPVLDLIQTL 136 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P ++ ++ + Y P L +I I + G PNDF E+ + + Sbjct: 137 PPYIYLLPTIALMGY---GPATALLATVIVAMPPAIRLTSL-GIRRTPNDFIELGQANGL 192 Query: 489 TGWRWWRYIILPGIFPYYVTG 509 T W+ + I LP P + G Sbjct: 193 TSWQMFVKIRLPFAIPSVMAG 213 >gi|162448436|ref|YP_001610803.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161159018|emb|CAN90323.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 302 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 6/92 (6%) Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 + E+A + +T W++ R + LPG P ++ G A GAW A +V E I+ T+G Sbjct: 198 YVELAETVRLTRWQFIRKVALPGALPGFLMGLRLAVTGAWLALVVVE-----QIN-ATSG 251 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 +G ++ + G ++LG+++ F LA + Sbjct: 252 IGYMMSLARSYGQTEIILLGLVVYGLFGLASD 283 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 8/129 (6%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 V A LA +R +L + I ++IP L + +++F KV+ L + ++ Sbjct: 126 VLALLAGLTRVGEALLDGPVQIKRAIPTLALIPLLILWFGIGEQMKVLTIALGVVIPVY- 184 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + +L I E++ + RL+ WQ + +P ++PG + + ++++G W Sbjct: 185 -------VHTHAALRTIDARYVELAETVRLTRWQFIRKVALPGALPGFLMGLRLAVTGAW 237 Query: 205 FFVVASEMI 213 +V E I Sbjct: 238 LALVVVEQI 246 >gi|297582679|ref|YP_003698459.1| binding-protein-dependent transporter inner membrane component [Bacillus selenitireducens MLS10] gi|297141136|gb|ADH97893.1| binding-protein-dependent transport systems inner membrane component [Bacillus selenitireducens MLS10] Length = 284 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 25/171 (14%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A V+S++ + L +KS ++ P+LD MQ++P +L V +F G V Sbjct: 105 LLASVLSVIIGVPFGILMSKSDTAEAIMKPVLDFMQTMPAFVYLIPAVAFF---GIGMVP 161 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS--- 188 G + IFA T ++ N+ + +P ++ E S +F + QK + + +P + Sbjct: 162 GVFASLIFATPPTVRLTNL------GIRQVPTEMVEASDAFGSTPAQKLFKVELPMAKVT 215 Query: 189 -MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M G+ +M+++S M+V+ ++I PG+G + A++ + Sbjct: 216 IMAGINQTVMLALS----------MVVIA-SMIGAPGLGREVLSALQRAQV 255 >gi|126731790|ref|ZP_01747594.1| ABC transporter permease protein [Sagittula stellata E-37] gi|126707617|gb|EBA06679.1| ABC transporter permease protein [Sagittula stellata E-37] Length = 645 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +A SRR V+ +D++Q++P L +L V M L PG V +A+ AI V Sbjct: 475 SALSRRAKSVIDVAVDLIQTLPSLVYL---VPIVMLLGPGDV-----SAVLAIAAYVVGA 526 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + +L + P L E RS + Q F + +PF++PGL+ + ++ G VV Sbjct: 527 VIRYCDHALRSAPDSLIEAVRSTGATEAQVFRIVRLPFAVPGLLLGLNQAIMLGISMVVV 586 Query: 210 SEMI 213 + ++ Sbjct: 587 TALV 590 >gi|111220875|ref|YP_711669.1| binding-protein-dependent transport system inner membrane component [Frankia alni ACN14a] gi|111148407|emb|CAJ60079.1| conserved hypothetical binding-protein-dependent transport system inner membrane component [Frankia alni ACN14a] Length = 264 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%) Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 +E+ S + WR+ R + LPG P++ TG A A A++V+E + R GL Sbjct: 160 RELMRSLAVGPWRFARTVSLPGALPFFFTGLRLASSLAVIAAVVAE-----YFGGRQNGL 214 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G+ I + ++P V+ C L Sbjct: 215 GSRITSAAANSAYPRAWAFVVAACLLGL 242 >gi|148271540|ref|YP_001221101.1| putative sugar ABC transporter permease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829470|emb|CAN00383.1| putative sugar ABC transporter, permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 276 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 33/200 (16%) Query: 43 TVPRDIVDIVPI------TLDVHSLPQYASRTTLRMLSAMVIS-------LLFTF--VYA 87 T P+D++ P TLD ++ Q S +++++VIS LL + YA Sbjct: 37 TKPQDLISSTPSLFPADPTLDGYA--QAISTQLPNLVTSLVISIGCVILTLLISLPAAYA 94 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLT-----FTVVYFMNLYPGKVIGAELAAI-FA 141 T + R G V+ L + Q IP + +T + + +N YPG ++ A++ FA Sbjct: 95 TAKFRVRGTGAVMFVFL-LAQMIPGIVLVTALFAIYDALGLLNTYPGLILAGATASVPFA 153 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + + + IP +L E +R S W+ F + VP S +V + S Sbjct: 154 VIVLRAF---------MLGIPDELLEAARIDGASSWRAFVSIVVPLSRNAIVTAALFSFL 204 Query: 202 GGWFFVVASEMIVVGDTVIP 221 W + + + G++++P Sbjct: 205 FAWADFLNANSLTSGNSIVP 224 >gi|13471349|ref|NP_102915.1| ATP-binding protein of ABC transporter [Mesorhizobium loti MAFF303099] gi|14022091|dbj|BAB48701.1| ATP-binding protein of ABC transporter [Mesorhizobium loti MAFF303099] Length = 282 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 6/136 (4%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PFA +L P FPL+ + Y N L L + IL N G ++ + Sbjct: 115 PFAIVLQVTPIVAIFPLI----NIYVNNQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNL 170 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 +++ T W+ RY+ LP PY++ G A G + ++V+E + ++GL Sbjct: 171 RDLFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVAGATGQ--SSGL 228 Query: 540 GAYIAESTEKGSFPEV 555 + I E+ + + P + Sbjct: 229 ASRIIEAGYRLNAPRL 244 >gi|219669661|ref|YP_002460096.1| ABC transporter inner membrane protein [Desulfitobacterium hafniense DCB-2] gi|219539921|gb|ACL21660.1| binding-protein-dependent transport systems inner membrane component [Desulfitobacterium hafniense DCB-2] Length = 252 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 24/168 (14%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FR+ V + I + +P+G++IG I P L P + P+ + Sbjct: 62 SLFRLGVGMAITIGLAVPLGLFIGLFSRAQKFITPTLAFLQQIPTIAWIPVFI------- 114 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + LM++ + + N + G + KEVA +F + ++ Sbjct: 115 ----LWLGIGEAMKIALMVYAAFFPVFINTLFGIQSVDQKLKEVAQAFSLGYQARITHVY 170 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 LP P++ G W A + +E+ + + GLG + E Sbjct: 171 LPSAAPHFFVGIRLGFSNCWRALVAAEIIA------SSKGLGYLLMEG 212 >gi|268680177|ref|YP_003304608.1| binding-protein-dependent transporters inner membrane component [Sulfurospirillum deleyianum DSM 6946] gi|268618208|gb|ACZ12573.1| binding-protein-dependent transport systems inner membrane component [Sulfurospirillum deleyianum DSM 6946] Length = 260 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 12/107 (11%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 + G+ D KE+ SFHI ++ R + P +F Y ++A G +W I++E+ Sbjct: 147 GALQGSRTIEGDLKEMMESFHIGFFQKVRDLYFPHLFSYLFPSWVSALGMSWKIVIMAEL 206 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFP------EVVLGVLIMCCFVL 567 S + G+GA +A + P V++GVL +++ Sbjct: 207 LS------SSDGIGASLAIARSHLDTPLALALVSVIIGVLFFVEYII 247 >gi|167772998|ref|ZP_02445051.1| hypothetical protein ANACOL_04386 [Anaerotruncus colihominis DSM 17241] gi|167664931|gb|EDS09061.1| hypothetical protein ANACOL_04386 [Anaerotruncus colihominis DSM 17241] Length = 282 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 15/130 (11%) Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G L A+F+ F F MY+ IPR L E +R S WQ FW +G+P G Sbjct: 150 MGIILPAVFSTFP------VFIMYRFFRGIPRSLIESARLDGASEWQIFWRIGLPLGSAG 203 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIP----LPGIGSYIALAIKEQDLLAILYAMLT 247 ++ M++S W + + ++ P LP I + A + A++ A+L Sbjct: 204 VMSAMVLSFLECWSMIEQPMTFLKNRSLWPLSLYLPDIAADRAGLALAASVTALIPAIL- 262 Query: 248 MLGVIFLYDQ 257 +FLY Q Sbjct: 263 ----VFLYGQ 268 >gi|119961121|ref|YP_948272.1| ABC-type nitrate/sulfonate transport system, permease component [Arthrobacter aurescens TC1] gi|119947980|gb|ABM06891.1| putative ABC-type nitrate/sulfonate transport system, permease component [Arthrobacter aurescens TC1] Length = 259 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 19/141 (13%) Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 +V LAA+F + V + ++ DL +V+R +RLS ++ + +P +M Sbjct: 123 RVTSIALAALFPTMIATV--------DGIRSVSNDLMDVARVYRLSRKERVLNVLLPAAM 174 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P + + +S+ + ++ASEM+ G + GIG+ LA ++ + A ++A + +L Sbjct: 175 PQIFSGLQVSLQVAFIVMIASEML--GSS----QGIGAMTLLA-QQSFMTADMWAGILLL 227 Query: 250 GVI-FLYD---QLLFRPMIVW 266 GVI FL + LL R ++ W Sbjct: 228 GVIGFLVNILFSLLKRKVLSW 248 >gi|91786945|ref|YP_547897.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] gi|91696170|gb|ABE42999.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] Length = 282 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV ++AS+I +P+GI +G + + +PF PA+ F PL++ Sbjct: 91 MTVWRVFGGFVLASLIAVPLGIAMGTYKGVEAFFEPFVSFCRYLPASAFIPLLILWAGIG 150 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+IF G+ + I+ V D E A + +++PG Sbjct: 151 ETQ-----KILVIFIGSVFQIVLMVAVTVGGARRDLVEAAYTLGAADRGIITRVLIPGAA 205 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 206 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 242 >gi|312116273|ref|YP_004013869.1| binding-protein-dependent transporters inner membrane component [Rhodomicrobium vannielii ATCC 17100] gi|311221402|gb|ADP72770.1| binding-protein-dependent transport systems inner membrane component [Rhodomicrobium vannielii ATCC 17100] Length = 280 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 21/203 (10%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+V V A S+R+ P D ++ IP + +L V++ P KV+ Sbjct: 93 QALVYGATAAIVLGVAAGLSKRVEQFFGPTFDTLRHIPGIAWLPLIVLWLGIGAPAKVLV 152 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 A F +F + Q + N+ + E++ L+ WQ + +P + P ++ Sbjct: 153 IAKAVFFPVF--------LNTLQGIRNVEKSHIELANVLTLNRWQMVRKVVLPSAFPSIM 204 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGV 251 ++ + W M+V+ + + L G+G I A + D L + ++ ++G Sbjct: 205 VSLRYAAGLAW------AMVVIAEGLSGLEGLGFLIFRAQGLLLTDQLVVCMIIIGLVG- 257 Query: 252 IFLYDQLLF---RPMIVWSNKFR 271 F D++++ R ++ W F Sbjct: 258 -FTIDRIMYLAQRRLLRWKQGFE 279 >gi|268592987|ref|ZP_06127208.1| taurine uptake ABC transporter, permease protein [Providencia rettgeri DSM 1131] gi|291311460|gb|EFE51913.1| taurine uptake ABC transporter, permease protein [Providencia rettgeri DSM 1131] Length = 252 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL + I G P + E+ + + W+ R I +P + P TG A G +W + Sbjct: 133 ILLSTINGIQTTPMTYIELGNLYQFNIWQKLRKIYIPSLLPNLFTGLRLAMGLSWATVVA 192 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +E+ + +G+G I ++ P V++G+L++ Sbjct: 193 AEMIA------ANSGIGYRINDARIMLDSPVVIVGILVI 225 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 8/129 (6%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S R + L+ ++ IP L ++ +++F IG E+ I I S + + Sbjct: 82 ALSLRTNQIFNLTLNAIRQIPPLAWIPLLILWFG-------IG-EVTKIILIIKSAFFPI 133 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 S + P E+ ++ + WQK + +P +P L + ++M W VVA+ Sbjct: 134 LLSTINGIQTTPMTYIELGNLYQFNIWQKLRKIYIPSLLPNLFTGLRLAMGLSWATVVAA 193 Query: 211 EMIVVGDTV 219 EMI + Sbjct: 194 EMIAANSGI 202 >gi|164687397|ref|ZP_02211425.1| hypothetical protein CLOBAR_01038 [Clostridium bartlettii DSM 16795] gi|164603171|gb|EDQ96636.1| hypothetical protein CLOBAR_01038 [Clostridium bartlettii DSM 16795] Length = 225 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 4/107 (3%) Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 Y++ +V+ P + ++ A T W R I+LP I P ++GA+ A+ SI Sbjct: 108 YVILSVLPKLKQLPANIEDAALDLGATPWYALRKIVLPQIKPGIISGALM----AFTMSI 163 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 V S+ T L I T +G PE+ +M VLAL Sbjct: 164 DDFVISFFTTGNGVTNLSIEIYSMTRRGLTPEINALSTLMFVVVLAL 210 >gi|126731474|ref|ZP_01747280.1| spermidine/putrescine ABC transporter, permease protein PotC [Sagittula stellata E-37] gi|126708010|gb|EBA07070.1| spermidine/putrescine ABC transporter, permease protein PotC [Sagittula stellata E-37] Length = 267 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%) Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 D++E A+ + + W +R + LP IFP +GA+ A + + I S + S G TT Sbjct: 164 DYEEAATDLYASRWVVFRRVTLPLIFPGLFSGAMLAFLISMDDFITSNMLSSGG----TT 219 Query: 538 GLGAYIAESTEKGSFPEV--VLGVLIMCCFVLA 568 L YI G+ PE+ V +LI+ VLA Sbjct: 220 TLPVYIFSLIRVGTSPELNAVATLLILGSLVLA 252 >gi|289706640|ref|ZP_06502989.1| ABC transporter, permease protein [Micrococcus luteus SK58] gi|289556656|gb|EFD49998.1| ABC transporter, permease protein [Micrococcus luteus SK58] Length = 289 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 8/122 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR + P++ ++++P L ++ +++ KV + A F +FT+ Sbjct: 125 SRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESKVTLIAIGAFFPVFTT------- 177 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 +Y +L ++ L E R+F G + +P +P + + ++++ W F+VA+E+ Sbjct: 178 -VYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQAWLFLVAAEL 236 Query: 213 IV 214 I Sbjct: 237 IA 238 >gi|197295190|ref|YP_002153731.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944669|emb|CAR57273.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 285 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 76/172 (44%), Gaps = 9/172 (5%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P +I+D + + V + ++ +TLR+ + V SRR+ + P Sbjct: 62 APSEILDTL-ARMGVTRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRVDALFEPT 120 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +++IP L ++ +++ K+ L AI A F + ++ + ++ R Sbjct: 121 FQALRAIPSLAWVPVLLLWLGIDEAPKIT---LIAIGAFFP-----VHLAVVAGIRDVDR 172 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 L E+ +RL F + +P ++P +V + +S W F+VA+E+I Sbjct: 173 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 224 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 25/160 (15%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456 VG +G + + +P Q L A P+ + P+++ LWL + L+ Sbjct: 103 VGAAMGLSRRVDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 151 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 G + + V+AG E+ + + + +R I+LP P VTG T Sbjct: 152 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 211 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 AW + +E+ + T GLG +++ E G P++V Sbjct: 212 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 244 >gi|114769693|ref|ZP_01447303.1| putative permease protein [alpha proteobacterium HTCC2255] gi|114549398|gb|EAU52280.1| putative permease protein [alpha proteobacterium HTCC2255] Length = 303 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 23/172 (13%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S R ++ P+LD+MQ+IP +L V M L GKV G L A+ + + + Sbjct: 133 SRSDRAQRIITPVLDVMQTIPSFVYLIPVV---MLLGIGKVPG--LLAVMIYASPPIIRL 187 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 T + + ++ E + +F + QK + + +P ++P G+ +MMS+S Sbjct: 188 T---NLGIRLVDAEVLEAADAFGSNYRQKLFQVQIPLALPNIFAGVNQTIMMSLS----M 240 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V PG+G + A+ Q L L L ++ + ++D++ Sbjct: 241 VVIAAMIGV-------PGLGVPVLRAVSNQYLALGLMNGLAIVAIAIIFDRV 285 >gi|108762126|ref|YP_630471.1| glycine betaine/L-proline ABC transporter permease [Myxococcus xanthus DK 1622] gi|108466006|gb|ABF91191.1| glycine betaine/L-proline ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 277 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 18/149 (12%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +++L+ AA SR + VL P LD+MQ++P +L V++F GKV Sbjct: 95 LSSAMVALVLGIPLGIWAAYSRVVERVLRPALDLMQTMPAFVYLIPAVLFF---RLGKVP 151 Query: 133 GAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 G IFA+ + ++ N+ + +P ++ E + +F + Q + +P ++P Sbjct: 152 GVVATVIFAMPPAVRLTNL------GIRQVPTEVVEAAIAFGATPRQTLLNVQLPIAVPT 205 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVG 216 G+ +M+S+S VV S MI G Sbjct: 206 LLAGVNQTIMLSLS----MVVISAMIGAG 230 >gi|271969470|ref|YP_003343666.1| ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270512645|gb|ACZ90923.1| ABC-type transporter, permease protein [Streptosporangium roseum DSM 43021] Length = 272 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R + +A ++ IP+G+ IG+ ++ + P +L A P+ V + Sbjct: 82 SLIRSLAGFALAIVVAIPLGLLIGWYKPVADLLNPVLELFRNTAALALLPVFVLILG--- 138 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L +S+++ + W IL N +AG + + A S + R ++ +ILP P Sbjct: 139 LGETSKISIIL-YACAWPILLNTVAGVKSVDPLLIKSARSMGLRPVRLFQKVILPAAVPT 197 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A GA++ ++ G GLG I + P++ G+L + Sbjct: 198 IFTGIRLA--GAYSILVLVAAEMVGA----KAGLGYLITYAQFNFRVPDMYAGILTISVL 251 Query: 566 VLALNRFL 573 L N+ L Sbjct: 252 GLLFNQLL 259 >gi|194467573|ref|ZP_03073560.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus reuteri 100-23] gi|194454609|gb|EDX43506.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus reuteri 100-23] Length = 221 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 20/220 (9%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP--- 420 +G I+ +F Y ++G + VV L+I + II +P+G +I S+I+P Sbjct: 7 LGQIIQYFQTNGGQYWQYVGQHIVLTVVTLVI-SMIIALPLG-------YIGSRIKPVAQ 58 Query: 421 ----FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 FAQLL P+ L++ + + + L +L + +L N I G + Sbjct: 59 FCVMFAQLLRIIPSLALLFLLIPFIGTGVVPALIALIVLAL----PPLLINTILGFNEVS 114 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTG-AITACGGAWNASIVSEVASWGHIHLR 535 +KEV + + + R I +P PY + G + +A++ + + + G L Sbjct: 115 PLYKEVGIALGMDQRQLRRQIEIPLALPYILNGIKLALVEIIASATLATYIGAGGLGTLI 174 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TGLG Y G+ +L +L M F + + H Sbjct: 175 FTGLGLYDMSYVMIGAVSVAILSLLAMISFDFLIRKVQKH 214 >gi|154497695|ref|ZP_02036073.1| hypothetical protein BACCAP_01671 [Bacteroides capillosus ATCC 29799] gi|150273193|gb|EDN00338.1| hypothetical protein BACCAP_01671 [Bacteroides capillosus ATCC 29799] Length = 248 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E A ++ W+ R + LP + PY+ +G TA G AW A + +EV Sbjct: 148 EGAKTWRFGRWKTLRLVYLPSVLPYFASGCSTALGLAWKAGVAAEV 193 >gi|119387470|ref|YP_918504.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119378045|gb|ABL72808.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] Length = 275 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 15/170 (8%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 LA RL LVP+LD++Q++P +L + + P A +A + + Sbjct: 113 LAGLMPRLDRALVPVLDLIQTMPPYIYL-LPAIALLGFGPAT---ALVATVIVAMPPAIR 168 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + Q+ P + E+ + ++ Q FW + +PF+MP ++ + S+ + VV Sbjct: 169 LTSLGIRQT----PNEFIELGHASGVTPAQMFWKIRLPFAMPSIMAGVNQSLMMAFGMVV 224 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + ++ G G+G I AI+ D+ + A + ++ + + D++ Sbjct: 225 IAGIVGSG-------GLGETIYGAIRTLDIATSINASIAIVVLTMVLDRV 267 >gi|330891653|gb|EGH24314.1| taurine ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 291 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 11/208 (5%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 S G+++ Y D LG ++ R+ + + A + IP+GI IG P Sbjct: 77 SKGWLLATKGYMDATLWQHLGA-SLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLI 135 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P + PL+V + L L L IF I G Sbjct: 136 EFYRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPTKVRA 191 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S T W+ R+++LP P +TG G W+ + +E+ + T+GLG Sbjct: 192 AQSLGATRWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVGAELIA------ATSGLGFM 245 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570 + + + VVLG+L++ A+ Sbjct: 246 VQSAAQFLVTDVVVLGILVIAVIAFAME 273 >gi|251792793|ref|YP_003007519.1| glycine betaine [Aggregatibacter aphrophilus NJ8700] gi|247534186|gb|ACS97432.1| glycine betaine [Aggregatibacter aphrophilus NJ8700] Length = 491 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+ +R ++ +I+Q+IP L L + + P +I L A+ IF + Sbjct: 28 ARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQN----- 82 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 Y L I + +++ +F LS WQ W + +P ++P ++ Sbjct: 83 ---TYLGLTQIDQSIQDAYTAFGLSRWQSLWRIELPMALPAMI 122 >gi|323499592|ref|ZP_08104561.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio sinaloensis DSM 21326] gi|323315332|gb|EGA68374.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio sinaloensis DSM 21326] Length = 266 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ+ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQRLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L + F D++L R I W +K Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKILTRA-IPWESK 266 >gi|296269302|ref|YP_003651934.1| binding-protein-dependent transporter inner membrane component [Thermobispora bispora DSM 43833] gi|296092089|gb|ADG88041.1| binding-protein-dependent transport systems inner membrane component [Thermobispora bispora DSM 43833] Length = 260 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 19/175 (10%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P + ++++P L +L+ V++F E ++ + + + + S ++ Sbjct: 100 LLGPPVTFVRTLPPLAYLSLLVIWFGI--------DEEPKVWLLLIAALPPVAVSTADAV 151 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + D +RS + WQ W + +P ++P ++ + +++ + VVA+E T Sbjct: 152 RGVHEDYLNAARSLGVPRWQLPWRVVLPSALPEILTGIRVAVGVAYTSVVAAE------T 205 Query: 219 VIPLPGIGSYIALAIK--EQD--LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 V +PGIG I A + + D +L IL L+ L + FL Q L R ++ W + Sbjct: 206 VNGIPGIGGMIRDAQRYNQTDVVILGILIIGLSGLLIDFLL-QTLDRRLVPWRGR 259 >gi|218670848|ref|ZP_03520519.1| probable spermidine/putrescine ABC transporter, permease protein [Rhizobium etli GR56] Length = 259 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%) Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157 I+ ++ IP+LG L + + M + P + + ++ A + A+ M ++ + Sbjct: 92 IIRMISWIPVLGRNGLVNSTLIEMGVIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 151 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L I R L E +R SGWQ W + +P + PG M+ G FVV M Sbjct: 152 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 203 Query: 218 TVIPLPGIGSYIALAIKEQ 236 + G + +AL +K Q Sbjct: 204 VQVMSGGQSASVALMMKNQ 222 >gi|167031930|ref|YP_001667161.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166858418|gb|ABY96825.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 237 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 38/64 (59%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFA+F + + + + Y+ L N+P L+E + ++ Q+ W + +P ++P +V + Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168 Query: 198 MSMS 201 ++++ Sbjct: 169 VALA 172 >gi|71910767|ref|YP_282317.1| phosphate transporter permease [Streptococcus pyogenes MGAS5005] gi|71853549|gb|AAZ51572.1| phosphate transport system permease protein [Streptococcus pyogenes MGAS5005] Length = 272 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ V+ + +++ G G L+ + +F + +TF Sbjct: 85 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 143 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 144 TDSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVV 203 Query: 215 VGDTVIP 221 V+P Sbjct: 204 GNSAVMP 210 >gi|332653563|ref|ZP_08419308.1| putative alkanesulfonate transport protein (ABC superfamily, membrane) [Ruminococcaceae bacterium D16] gi|332518709|gb|EGJ48312.1| putative alkanesulfonate transport protein (ABC superfamily, membrane) [Ruminococcaceae bacterium D16] Length = 255 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 5/107 (4%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P +++ A P F LV+ V Y + + LM+ W NV G Sbjct: 96 PVIRMIRAVPVVSFILLVMLAV--YRSTVPMVIVTLMVLPVVWS---NVKQGIGQADRQL 150 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E+ ++ + W+ + I LP I PY+++ T G AW + + +EV Sbjct: 151 LELGRAYRFSRWKKVKLIYLPSIQPYFLSAVTTGMGLAWKSGVAAEV 197 >gi|295698942|ref|YP_003606835.1| binding-protein-dependent transporters inner membrane component [Burkholderia sp. CCGE1002] gi|295438155|gb|ADG17324.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] Length = 292 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/133 (21%), Positives = 66/133 (49%), Gaps = 10/133 (7%) Query: 82 FTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 F F+ +LA S R+G L+ +L M +P + L +++F L G ++ F Sbjct: 109 FAFMLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------F 159 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 + + +W + + Y ++P L+ R++ L+G + + VP ++P ++ + + Sbjct: 160 VLVHAVLWPLALNTYSGFQSVPATLKMTGRNYGLTGLRHVLLILVPAALPSILAGLRVGW 219 Query: 201 SGGWFFVVASEMI 213 + W ++A+E++ Sbjct: 220 AFAWRTLIAAELV 232 >gi|253687794|ref|YP_003016984.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754372|gb|ACT12448.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 257 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 28/166 (16%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R + +A I+ +P+G+ +G P I++ PF Q L P PL V Sbjct: 63 AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAV----- 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494 +WL + ++++++F +V+ GA A + VA + + + + Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIF 169 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +++LP P T A G W + I +E+ + T+G+G Sbjct: 170 FHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMVA------ATSGIG 209 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL ++ + + R LSA ++++ L S + V P + ++ +P + + Sbjct: 57 SLWEHIAVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLA 116 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 VV+ IG E + F IF + ++ ++ + R V+++ S Q Sbjct: 117 VVWLG-------IG-EASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQI 168 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 F+++ +P ++P L + +++ GW ++A+EM+ Sbjct: 169 FFHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMV 202 >gi|218462052|ref|ZP_03502143.1| probable spermidine/putrescine ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 302 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ A + A+ M ++ +L I R L E +R SGWQ W + +P + PG Sbjct: 171 SDFAVVLAMVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG-- 228 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 M+ G FVV M + G + +AL +K Q Sbjct: 229 ------MAIGTIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 265 >gi|218779567|ref|YP_002430885.1| binding-protein-dependent transport systems inner membrane component [Desulfatibacillum alkenivorans AK-01] gi|218760951|gb|ACL03417.1| binding-protein-dependent transport systems inner membrane component [Desulfatibacillum alkenivorans AK-01] Length = 277 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 27/194 (13%) Query: 66 SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + TTL M LSA++ L LA +S + L P LD MQ+ P +L V+ F Sbjct: 90 AMTTLAMVLSAVIFCTLVGAPLGILAGRSDKFESWLRPFLDAMQTTPAFVYLVPIVMLF- 148 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G +FA+ + +T + + +L E +++F + WQ + Sbjct: 149 --SVGNVAGVLSTIVFAM--PPIIRLT---SLGIRGVHPELVEAAQAFGATNWQVLVRVQ 201 Query: 185 VPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 +P ++P GL +MM++S VV + +I G G+GS + L + D Sbjct: 202 IPLALPTILAGLNQTIMMALS----MVVIAALIGAG-------GLGSPVILGLNTLD--- 247 Query: 241 ILYAMLTMLGVIFL 254 I A++ LG++ + Sbjct: 248 IGQAVIGGLGIVLM 261 >gi|152980281|ref|YP_001352431.1| sulfonate/nitrate transport system permease protein [Janthinobacterium sp. Marseille] gi|151280358|gb|ABR88768.1| sulfonate/nitrate transport system permease protein [Janthinobacterium sp. Marseille] Length = 276 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 19/167 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ + L+ G + + N G + E+ Sbjct: 120 QMIRNIPALALIPLVILWFGIEETSKIF----LVAVGVFFPVYLNTFHGIRSVDKGLIEM 175 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ ++GW +R +ILPG P + G + G W IV+E S +G+G Sbjct: 176 AKSYGLSGWSLYRDVILPGALPSILVGVRFSLGLVWVLLIVAETIS------AQSGIGYM 229 Query: 543 IAESTEKGSFPEVVLGVL---IMCCFVLALNRFL------WHPLYLY 580 + E V++G+L ++ ++R L WHP Y + Sbjct: 230 TMNAREFLQTDVVLVGILLYALLGKLADVVSRTLEGYWLRWHPGYRH 276 >gi|126733602|ref|ZP_01749349.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. CCS2] gi|126716468|gb|EBA13332.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. CCS2] Length = 269 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 18/157 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF-SMYQSL 158 LVP++ + IP + L V++F G + A+ +A+ + T + Y ++ Sbjct: 112 LVPLVAAIFPIPKIALLPLFVIWF---------GIDEASKYALIAFGTFTPTVVATYGAV 162 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS + + +P +MPG++ + +S++ +VA+EM+ G Sbjct: 163 DNVDRSLIRMGQSFGLSWFSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAE 220 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVIF 253 GIG+YI A DL + +L++LGVI Sbjct: 221 Y----GIGAYILQAGSLYDLERLFAGVVILSLLGVIL 253 >gi|326772164|ref|ZP_08231449.1| glycine betaine/L-proline ABC transporter, permease protein [Actinomyces viscosus C505] gi|326638297|gb|EGE39198.1| glycine betaine/L-proline ABC transporter, permease protein [Actinomyces viscosus C505] Length = 292 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 60/120 (50%), Gaps = 16/120 (13%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A V +L+F AA+++ + ++ P+LD+MQ++P +L +V++F + + PG Sbjct: 104 ATVTALIFAIPLGIWAARNKYVSALVRPVLDLMQTMPAFVYLIPSVLFFSIGVVPG---- 159 Query: 134 AELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +F + ++ M + + + + ++ E RSF + WQ + +P ++P Sbjct: 160 --------MFATLIFAMPPGVRMTELGIKQVDKETVEAGRSFGATDWQILRGIQLPLAVP 211 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 9/132 (6%) Query: 381 WLGCITMFRVVVLIIIASIIW-IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 W + +V L + ++I+ IP+GIW ++S+ ++P L+ PA V+ + Sbjct: 91 WTNAMETLVLVTLATVTALIFAIPLGIWAARNKYVSALVRPVLDLMQTMPAFVYL---IP 147 Query: 440 CVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V ++ + P ++ +L IF + + G + E SF T W+ R I Sbjct: 148 SVLFFSIGVVPGMFATL--IFAMPPGVRMTEL-GIKQVDKETVEAGRSFGATDWQILRGI 204 Query: 498 ILPGIFPYYVTG 509 LP P + G Sbjct: 205 QLPLAVPTIMAG 216 >gi|283853439|ref|ZP_06370683.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. FW1012B] gi|283571159|gb|EFC19175.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. FW1012B] Length = 263 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IP G+ +G +S + P +LL ++ + + ++ + + L +++F Sbjct: 82 IPCGLAMGVSRRLSGLLTPTVELLRP---VPPPAIIPAAMLFWGIGLGMKL-FVVVFACF 137 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + IL + GA F+ A+++ T W +ILP P G TA A + Sbjct: 138 FPILVGAVDGARGVAPGFRLTAAAYGATRWDMLARVILPAAGPSVAAGFRTAVPMALIVA 197 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ++SE+ T G+G YI + PE+ GV+++ LA+N Sbjct: 198 VLSEMIG------ATGGIGHYILRMERTFAIPEMYAGVVMLGIMGLAVN 240 >gi|227524816|ref|ZP_03954865.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] gi|227088031|gb|EEI23343.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] Length = 309 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%) Query: 75 AMVISLLF---TFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127 A VIS F T VY T +R +L P+ +++ IP + GF+ +VV + N++ Sbjct: 98 AAVISTPFAIGTAVYMT-EISPKRGAKILQPVTELLVGIPSVVYGFIGLSVVVPFVRNVF 156 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G G L+ F +F + + SL ++P + S + + WQ W + + Sbjct: 157 GGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLALGATKWQTIWKVVLRA 215 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + PG++ ++ M+ + +A +M++ +++P Sbjct: 216 ATPGILTAVVFGMARAFGEALAVQMVIGNASLMP 249 >gi|89053964|ref|YP_509415.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] gi|88863513|gb|ABD54390.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] Length = 283 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 15/168 (8%) Query: 69 TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TLR+ + A++I+++ A L A+S+ M P I+Q PI+ +Y N Sbjct: 83 TLRITMLALLIAIVGGVGLAILFAQSKFAEMSFSPFAVILQVTPIVSIAPLIFIYIENRL 142 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G ++ A + A F + N T + + N+ RDL + +R S WQ+ +L +P Sbjct: 143 VGLLLCAWIVAFFPVLA----NTTLGLKSADHNL-RDLFSI---YRASRWQRLVHLQLPS 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 ++P + + ++GG + A VV + V G+ S +A I E Sbjct: 195 ALPYFLGG--LKIAGGLALIGA----VVAEYVAGSGGLASGLAFRILE 236 >gi|77456438|ref|YP_345943.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77380441|gb|ABA71954.1| putative ABC sulfur transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 532 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 16/157 (10%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR VL P L ++ I I ++ +F K + LAA F +F + Sbjct: 366 SRTSERVLGPTLAALRQIAIFAWVPLLTAWFGLGELAKWVFVALAAFFPLFVAT------ 419 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 +S+ N+ L E ++ RLS Q+ L +P + PG+ + +S+ W + +E Sbjct: 420 --QRSVANLSPQLNEAAQVLRLSLAQRLLRLVLPGAAPGIFAGLRLSLIYAWLGTIGAEY 477 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 + + GIGS + I Q LL + M ML Sbjct: 478 FMPSNG-----GIGSQM---IGAQQLLRMDLIMAGML 506 >gi|307130433|ref|YP_003882449.1| alkanesulfonates transport system permease [Dickeya dadantii 3937] gi|306527962|gb|ADM97892.1| Alkanesulfonates transport system permease protein [Dickeya dadantii 3937] Length = 569 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 17/218 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SLP + R L + + + S R V P L +++ + + +L Sbjct: 366 SLPDAMRHSLWRALVGGALGVSAGLLAGLALGLSTRAEAVFTPTLTLLRQVALFAWLPLI 425 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + N GKV L A F M + ++ + L+EV++ RL + + Sbjct: 426 TAWVGNDDGGKVTFIALVAFFP--------MLVATHRGVRQRSLALQEVAQVLRLPWFHR 477 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 L +P + P L + ++M W + +E + GIGS + A + D+ Sbjct: 478 LRRLILPGAAPALFTGLRLAMIYAWLGAIGAEYFMSSGA-----GIGSLMINAQQLLDMP 532 Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 IL ML + L+D L R + RTTG Sbjct: 533 IILSGMLLIGVTGALFDHLGQR----LEQRMTRWRTTG 566 >gi|146282188|ref|YP_001172341.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145570393|gb|ABP79499.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|327480437|gb|AEA83747.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 257 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%) Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEK 549 W+ R + LP + P +TGA A G AW A I +E + +G GLG +A S E Sbjct: 166 WQLLRRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGQ------GLGRSLAYSGEI 219 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 V++ +L++ +++ + L + R LR Sbjct: 220 ADMVGVMMNILVIAILATLIDQVV---LEKFKQRMLR 253 >gi|56697293|ref|YP_167659.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56679030|gb|AAV95696.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 343 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/152 (20%), Positives = 77/152 (50%), Gaps = 22/152 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 +++ RL + +PILD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 176 SRNDRLQRMTIPILDMLQTLPSFVYL-IPLIFLFSVTEPKLYGIAIILYAIVPVIRLTDL 234 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + + RD+ E + SF ++ QK + + +P ++P G+ +MMS++ Sbjct: 235 GIRL------VDRDVIEAADSFGMTDRQKLFGVQIPLALPNIMAGVNQTIMMSLA----- 283 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 284 -----MVVIA-SLVSAPGLGVLVLRGIRNLEL 309 >gi|21910416|ref|NP_664684.1| putative phosphate ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28895992|ref|NP_802342.1| phosphate ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] gi|21904614|gb|AAM79487.1| putative phosphate ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28811242|dbj|BAC64175.1| putative phosphate ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] Length = 311 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 3/126 (2%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +L P ++++ IP + GF+ V+ FM G L+ + +F + +TF Sbjct: 124 LLQPAVELLVGIPSVVYGFIGLQVIVPFMRAIFGGTGFGILSGVCVLFVMILPTVTFMTT 183 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 184 DSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAIIFGMARAFGEALAIQMVVG 243 Query: 216 GDTVIP 221 V+P Sbjct: 244 NSAVMP 249 >gi|307329513|ref|ZP_07608673.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] gi|306884818|gb|EFN15844.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] Length = 301 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 17/207 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+++ + +++ + R + L P+LD + +P L L F+N++ Sbjct: 104 TLQRVVAGYALGTAAGYLFGLVMGALRMVRAALEPLLDALYVVPKLALLPV----FLNMF 159 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G G ++A + VW S ++ + E + F WQ F ++ +P Sbjct: 160 -GLGEGPQIALVATTVFFFVW---ISTMAAVMGVAEGYREAGQVFGAGPWQMFRHVLLPA 215 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAM 245 S+P ++ M ++ +VASE I D G+G I + + + D++ + Sbjct: 216 SLPQVLVGMRVASGVAVLVIVASEQIAAND------GLGHLIFDSRTLFQNDVMFVGIVC 269 Query: 246 LTMLGVIFLY-DQLLFRPMIVWSNKFR 271 + +LGV+F + + R + W+ + R Sbjct: 270 VAVLGVVFSELVRFIGRRLTPWAPRDR 296 >gi|299538418|ref|ZP_07051701.1| glycine betaine transport system permease protein [Lysinibacillus fusiformis ZC1] gi|298726005|gb|EFI66597.1| glycine betaine transport system permease protein [Lysinibacillus fusiformis ZC1] Length = 284 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 +KS ++ PILD MQ++P +L V +F G V G + IFA+ T ++ N Sbjct: 122 SKSTVAENIIKPILDFMQTMPGFVYLIPAVAFF---GIGIVPGVFASVIFALPPTVRMTN 178 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + +P++L E + S+ + QK + + +P + M G+ +M+S+S Sbjct: 179 L------GIRQVPKELVEAADSYGSTASQKLFKVEIPLAKSTIMAGINQTVMLSLS---- 228 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ + Sbjct: 229 ------MVVIA-SMIGAPGLGREVLTALQRTQV 254 >gi|260426263|ref|ZP_05780242.1| choline ABC transporter, permease protein [Citreicella sp. SE45] gi|260420755|gb|EEX14006.1| choline ABC transporter, permease protein [Citreicella sp. SE45] Length = 278 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA +L L PILD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 118 AAHRPKLYTYLRPILDLMQTLPTFVYLIPAIVFFGIGMVPGLI-----ATVIFVLPAPI- 171 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T Y + + P+ L E + +F + Q + + +P+++P GL +M+S+S Sbjct: 172 RLT---YLGVSSTPKPLLEAATAFGATSSQTLFKVELPYAVPQIMAGLNQTIMLSLS 225 >gi|239916800|ref|YP_002956358.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Micrococcus luteus NCTC 2665] gi|281414739|ref|ZP_06246481.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Micrococcus luteus NCTC 2665] gi|239838007|gb|ACS29804.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Micrococcus luteus NCTC 2665] Length = 289 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 8/122 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR + P++ ++++P L ++ +++ KV + A F +FT+ Sbjct: 125 SRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESKVTLIAIGAFFPVFTT------- 177 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 +Y +L ++ L E R+F G + +P +P + + ++++ W F+VA+E+ Sbjct: 178 -VYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQAWLFLVAAEL 236 Query: 213 IV 214 I Sbjct: 237 IA 238 >gi|146276830|ref|YP_001166989.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145555071|gb|ABP69684.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 270 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 8/152 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L +A T R+ + + + + + SR +L P L +++IP + ++ Sbjct: 67 ALADHAMATLGRVGAGFGVGVAAGTLAGAVTGYSRLASRLLDPSLQALRAIPSIAWVPLF 126 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F K++ + F ++ + ++ + R + EV R +RLSG Sbjct: 127 ILWFGIFETSKIVLIAVGVFFPVY--------LGLMAAIRCVDRKIVEVGRIYRLSGPAM 178 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + +P +P V + + GW FVVA+E Sbjct: 179 VGRILLPAVLPAYVTALRSGLGLGWMFVVAAE 210 >gi|90422365|ref|YP_530735.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB18] gi|90104379|gb|ABD86416.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB18] Length = 255 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 12/153 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 R L ML V +LL SR L + + P++ IP L ++ F Sbjct: 67 RLALGMLLGGVPALLLGLAMGI----SRPLRVAIDPLISATYPIPKSAILPLVLLIFGLG 122 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 KV+ L A + I + + + N+ R +V +FR S WQ F + +P Sbjct: 123 ELSKVVMVALGAFYPIVINTM--------VGVVNLDRIYLDVGHNFRASRWQVFRTIALP 174 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 ++P ++ + ++ G + SEM+ D + Sbjct: 175 GALPSIMAGIKLAAGMGLILIAISEMVASNDGI 207 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 4/130 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + +++ + + +G+ +G + I P P + PLV+ Sbjct: 64 SLRRLALGMLLGGVPALLLGLAMGISRPLRVAIDPLISATYPIPKSAILPLVLLIFGLGE 123 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ + ++L G + I+ N + G + +V +F + W+ +R I LPG P Sbjct: 124 LSKVVMVAL----GAFYPIVINTMVGVVNLDRIYLDVGHNFRASRWQVFRTIALPGALPS 179 Query: 506 YVTGAITACG 515 + G A G Sbjct: 180 IMAGIKLAAG 189 >gi|323488305|ref|ZP_08093554.1| ABC transporter permease protein [Planococcus donghaensis MPA1U2] gi|323398057|gb|EGA90854.1| ABC transporter permease protein [Planococcus donghaensis MPA1U2] Length = 558 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 7/87 (8%) Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY--ILFNVIAGASAFPNDFKEVAS 484 F N+F + + S Y L+ +W +F Q+Y I V +E + Sbjct: 135 GFITNLFANIGIDIPSIYGLHGMVW-----VFSLQFYPHIYLYVSGALKTIDTSLEEASE 189 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAI 511 S I+GWR R + LP IFP TGA+ Sbjct: 190 SLGISGWRRIRKVTLPLIFPTVSTGAL 216 >gi|320534785|ref|ZP_08035206.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320133006|gb|EFW25533.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 292 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 16/132 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q A T + + A + +L+F A++++ + +++ P+LD+MQ++P +L +V++ Sbjct: 92 QNAMETLVLVTLATLTALVFAIPLGIWASRNKYVSVLIRPVLDLMQTMPAFVYLIPSVLF 151 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQ 178 F + + PG +F + ++ M + + + + ++ E RSF + WQ Sbjct: 152 FSIGVVPG------------MFATLIFAMPPGVRMTELGIKQVDKETVEAGRSFGATDWQ 199 Query: 179 KFWYLGVPFSMP 190 + +P ++P Sbjct: 200 IMRGIQLPLAVP 211 >gi|297192568|ref|ZP_06909966.1| glycine betaine ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297151399|gb|EDY62016.2| glycine betaine ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 681 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 ++L+A+V++L + L A++ RL L P+LD MQ++P +L V F Sbjct: 501 QVLAALVVTLFLGVLAGILCARAGRLERWLRPVLDAMQTMPQFVYLIPVVALFGV----- 555 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A ++AI A + + Q L + E SRS S Q+ + +P + P Sbjct: 556 ---ARVSAIVAAVVYALPAVVRITAQGLREVDPAALEASRSLGASTRQQLLRVQLPLARP 612 Query: 191 GL 192 L Sbjct: 613 AL 614 >gi|327189415|gb|EGE56582.1| spermidine/putrescine ABC transporter permease [Rhizobium etli CNPAF512] Length = 301 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%) Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157 I+ ++ IP+LG L + + M + P + + ++ A + A+ M ++ + Sbjct: 134 IIRMISWIPVLGRNGLVNSTLIEMGVIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 193 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L I R L E +R SGWQ W + +P + PG M+ G FVV M Sbjct: 194 LMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 245 Query: 218 TVIPLPGIGSYIALAIKEQ 236 + G + +AL +K Q Sbjct: 246 VQVMSGGQSASVALMMKNQ 264 >gi|153949190|ref|YP_001399348.1| ABC aliphatic sulfonates ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|167466455|ref|ZP_02331159.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis FV-1] gi|170022674|ref|YP_001719179.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|152960685|gb|ABS48146.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pseudotuberculosis IP 31758] gi|169749208|gb|ACA66726.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] Length = 264 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 23/215 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I V + SR +L + +++++P L + +++ Sbjct: 60 QHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + Y + NI L E++RS+ LSG++ Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDSGLLEMARSYGLSGFRLLTQ 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VVLPGALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVV 224 Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 + + +LG L D QLL R + W ++ Sbjct: 225 VVAIVLYALLGK--LADGSAQLLERVWLRWHPAYQ 257 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 21/205 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R ++ I I + +G+ G + Q++ P PLV+ + Sbjct: 63 TISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G + E+A S+ ++G+R ++LPG Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S +G+G Y+A + + +VV+ +++ Sbjct: 179 PSIMVGVRFALGFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIVLY 231 Query: 564 CFVLALNR----------FLWHPLY 578 + L WHP Y Sbjct: 232 ALLGKLADGSAQLLERVWLRWHPAY 256 >gi|154499091|ref|ZP_02037469.1| hypothetical protein BACCAP_03083 [Bacteroides capillosus ATCC 29799] gi|150271931|gb|EDM99157.1| hypothetical protein BACCAP_03083 [Bacteroides capillosus ATCC 29799] Length = 304 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/167 (19%), Positives = 72/167 (43%), Gaps = 10/167 (5%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G+ G+ P + + P A++L+ PA ++ P +++ + + +L++I G W Sbjct: 134 LGMLAGWSPRLRGFLVPIARVLSPVPAIIYAPYLIALMPSFRSAS----ALVIILGIFWP 189 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + + A ++ I LP + P ++G + ++ + Sbjct: 190 TFLQTVGRTVGLDPHILDSARVLCLSDREMVFQIFLPALLPGLISGLRVSLSTSFMLLTL 249 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 +E+ T+GLG +I + ++ V+ G+L++ V ALN Sbjct: 250 AEMMG------ATSGLGYFIKNFADYANYTNVIAGILLVALVVTALN 290 >gi|91783643|ref|YP_558849.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91687597|gb|ABE30797.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 292 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L ++ FV +LA S RLG ++ +L M +P + L +++F L G Sbjct: 99 LLRGYLLGAALAFVLTSLAV-STRLGRDVLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + S +W + + Y ++P L R++ L+G + + VP ++P Sbjct: 157 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGIRHVLLILVPAALP 209 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 210 AILAGLRVGWAFAWRTLIAAELV 232 >gi|296159209|ref|ZP_06842035.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295890468|gb|EFG70260.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 292 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L ++ FV +LA S RLG ++ +L M +P + L +++F L G Sbjct: 99 LLRGYLLGAALAFVLTSLAV-STRLGRDVLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + S +W + + Y ++P L R++ L+G + + VP ++P Sbjct: 157 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGIRHVLLILVPAALP 209 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 210 AILAGLRVGWAFAWRTLIAAELV 232 >gi|269964845|ref|ZP_06179082.1| ABC transporter permease protein [Vibrio alginolyticus 40B] gi|269830505|gb|EEZ84727.1| ABC transporter permease protein [Vibrio alginolyticus 40B] Length = 266 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W +K Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWESK 266 >gi|229048488|ref|ZP_04194051.1| ABC transporter permease protein [Bacillus cereus AH676] gi|228722853|gb|EEL74235.1| ABC transporter permease protein [Bacillus cereus AH676] Length = 191 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 24/172 (13%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 IIA+ +W W+ P ++ + P+ +L A P P+++ PN+ S+ Sbjct: 17 IIATFLW-----WM---PLLARVLDPYLVVLNAMPKVALGPIIIVI-----FGPNISSSI 63 Query: 455 LMIFGTQWYILFNVIAGASAF---PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 M G I+ ++ SAF +++ +V +F W+ ++ ++LP FP ++ Sbjct: 64 AM--GVIISIIITILVIYSAFQEVDSNYIKVMDTFGANKWQCYKQVVLPASFPAIISTLK 121 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 G +W I +G + + GLG I+ + +F ++L VL+ C Sbjct: 122 VNVGLSWVGVI------FGELLVSKQGLGYLISYGFQVFNFTLILLSVLLTC 167 >gi|163759394|ref|ZP_02166480.1| hypothetical protein HPDFL43_06500 [Hoeflea phototrophica DFL-43] gi|162283798|gb|EDQ34083.1| hypothetical protein HPDFL43_06500 [Hoeflea phototrophica DFL-43] Length = 283 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 11/71 (15%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T ++Y SL I L +R S WQ FW + P S+PG+V G F +V Sbjct: 169 TLTIYASLARINPKLILAARDLGASQWQTFWRVIFPLSIPGVV--------AGVFLIV-- 218 Query: 211 EMIVVGDTVIP 221 +I +GD V P Sbjct: 219 -VITIGDYVTP 228 >gi|116687129|ref|YP_840376.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|116652844|gb|ABK13483.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 288 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 25/160 (15%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456 VG +G I + +P Q L A P+ + P+++ LWL + L+ Sbjct: 106 VGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 154 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 G + + V+AG E+ + + + +R I+LP P VTG T Sbjct: 155 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 AW + +E+ + T GLG +++ E G P++V Sbjct: 215 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 247 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 9/172 (5%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P +I+D + + V + ++ +TLR+ + V SRR+ + P Sbjct: 65 APSEILDTL-ARMGVIRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPT 123 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +++IP L ++ +++ K+ L AI A F ++ + ++ R Sbjct: 124 FQALRAIPSLAWVPVLLLWLGIDEAPKIT---LIAIGAFFPVH-----LAVVAGIRDVDR 175 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 L E+ +RL F + +P ++P +V + +S W F+VA+E+I Sbjct: 176 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 227 >gi|107029257|ref|YP_626352.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|105898421|gb|ABF81379.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] Length = 285 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 9/172 (5%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P +I+D + + V + ++ +TLR+ + V SRR+ + P Sbjct: 62 APSEILDTL-ARMGVIRVARHVGASTLRVAAGFAAGAGLALVVGAAMGLSRRIDALFEPT 120 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +++IP L ++ +++ K+ L AI A F ++ + ++ R Sbjct: 121 FQALRAIPSLAWVPVLLLWLGIDEAPKIT---LIAIGAFFPVH-----LAVVAGIRDVDR 172 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 L E+ +RL F + +P ++P +V + +S W F+VA+E+I Sbjct: 173 KLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIAA 224 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 25/160 (15%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LM 456 VG +G I + +P Q L A P+ + P+++ LWL + L+ Sbjct: 103 VGAAMGLSRRIDALFEPTFQALRAIPSLAWVPVLL-----------LWLGIDEAPKITLI 151 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 G + + V+AG E+ + + + +R I+LP P VTG T Sbjct: 152 AIGAFFPVHLAVVAGIRDVDRKLVELGAVYRLGPLALFRRILLPAALPQIVTGLRTGLSL 211 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 AW + +E+ + T GLG +++ E G P++V Sbjct: 212 AWMFMVAAELIAA------TRGLGFLLSDGRETGR-PDLV 244 >gi|153832682|ref|ZP_01985349.1| ABC transporter permease protein [Vibrio harveyi HY01] gi|148871027|gb|EDL69911.1| ABC transporter permease protein [Vibrio harveyi HY01] Length = 266 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W +K Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSIALYFITDKLL-KKAIPWESK 266 >gi|15598708|ref|NP_252202.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9949659|gb|AAG06900.1|AE004771_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 258 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 11/192 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 IT +VV + +++ + +G+ +G P + + P+ L P F PL V + Sbjct: 60 AITSLEIVVGFALGALLGVSIGVALGLSPTTEAMLSPYILALQIAPKVAFAPLFVMWLG- 118 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 Y + P + +++L++F + ++ NV++ D + + + W+ +R + P Sbjct: 119 YTVYPKILIAVLIVF---FPVMINVLSAIRTVDPDMINLVRAMSASRWQIFRLVEFPSAM 175 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 +G A A V E+ GLG + ++ +G+ V + ++++ Sbjct: 176 AALFSGLRIASTLAVIGVTVGELVG------GNKGLGFLLVDAEGQGNTAGVFVAIVMLT 229 Query: 564 CF-VLALNRFLW 574 VLA +W Sbjct: 230 LIGVLAYGAVVW 241 >gi|87119552|ref|ZP_01075449.1| putative permease of ABC transporter [Marinomonas sp. MED121] gi|86165028|gb|EAQ66296.1| putative permease of ABC transporter [Marinomonas sp. MED121] Length = 267 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T + ++SA IS+L AA L ++ PILD+MQ+IP +L T++ F + Sbjct: 81 QTLVLVVSATFISVLIGVPLGIAAAHRPWLYTIMRPILDLMQTIPTFVYLIPTLILFGLG 140 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 PG + IFA+ + +T Y + +P +L E +F + + + + + Sbjct: 141 YVPGLI----STIIFAV--AAPIRLT---YLGISKVPNELIEAGLAFGCTKSKLLYKVEL 191 Query: 186 PFSMP----GLVWNMMMSMS 201 P +MP G+ +M+S+S Sbjct: 192 PAAMPNIMAGITQCIMLSLS 211 >gi|298247045|ref|ZP_06970850.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] gi|297549704|gb|EFH83570.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] Length = 292 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 18/193 (9%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL-----DIMQSIPILGFLTFTVVYFMNL 126 ML ++V+ + A L K ++ GM+L ++ IM ++P+ F+ F+ + +N Sbjct: 97 MLLSLVLGAPMAYGLARLPVKGKQ-GMLLAFLVVQMFPSIMLALPL--FVIFSQIGLVNS 153 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P A I A+ T + T M ++PRDLE+ + S W F+ + +P Sbjct: 154 IP--------AVILAVTTRTLPFATLVMRPYFLSLPRDLEDAAFIDGCSLWGAFYRIIMP 205 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIA-LAIKEQDLLAILYA 244 S PG++ ++ GW + ++ D PL GI +I ++ DL+A+ Sbjct: 206 LSRPGILTVGALTFLMGWSDFLFPLTLISDDNKRPLTLGIYKFIGEYGVRWNDLMAVSVV 265 Query: 245 MLTMLGVIFLYDQ 257 + ++F++ Q Sbjct: 266 AALPIILVFIFGQ 278 >gi|290955278|ref|YP_003486460.1| glycine betaine ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260644804|emb|CBG67889.1| putative glycine betaine ABC transport system integral membrane protein [Streptomyces scabiei 87.22] Length = 672 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 15/203 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L + L Q + T +SA++++LLF A S R+ + P+LD MQ++P + Sbjct: 155 LGLQGLWQESMDTLALTVSAVLVALLFGIPLGVWAGLSDRVNRIATPLLDFMQTMPTFVY 214 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L ++F+ IG A I + + + + + ++ +P E + S + Sbjct: 215 LAPLTLFFL-------IGGASATIATVVYAAPPAIRITAH-AIRTVPETTVEAADSLGAT 266 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 Q + +P S +V + + ++A+ +V +I PG+G + A++ Sbjct: 267 RRQALLKVLLPMSKRTVVMGVNQT-------IMAALAMVTIAALIDAPGLGKTVVQALQS 319 Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258 D+ A L+++ + + D++ Sbjct: 320 LDVGTAFNAGLSIVVMAIVLDRV 342 >gi|284032816|ref|YP_003382747.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] gi|283812109|gb|ADB33948.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] Length = 279 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 TF M Q +IP +LEE +R + WQ FW + +P + PGL+ ++++ W Sbjct: 157 TFLMMQFFKSIPAELEEAARLDGCNPWQTFWKVVLPVAKPGLISLAIITVLASW 210 >gi|156978036|ref|YP_001448942.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Vibrio harveyi ATCC BAA-1116] gi|156529630|gb|ABU74715.1| hypothetical protein VIBHAR_06840 [Vibrio harveyi ATCC BAA-1116] Length = 266 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W +K Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSIALYFITDKLL-KKAIPWESK 266 >gi|154492129|ref|ZP_02031755.1| hypothetical protein PARMER_01760 [Parabacteroides merdae ATCC 43184] gi|154087354|gb|EDN86399.1| hypothetical protein PARMER_01760 [Parabacteroides merdae ATCC 43184] Length = 469 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 16/171 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q T LR M ISL+ + L K + + P+L IM+SIP++ F+ +++ Sbjct: 61 QSVMATVLRGTIGMSISLMAAMGVSLLFYKCEWIYELFRPLLAIMRSIPVISFILLALIF 120 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + AE + F + +T ++ + + ++ ++R FR+ W K Sbjct: 121 ---------LNAESIPLIIAFLTMFPLLTENLTKGIRGQRKEFSIMARQFRIGRWNKLTQ 171 Query: 183 LGVPFSMPGLVWNMMMSMSG-GWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 + P P +++ + S SG GW ++ E++ PGIG + A Sbjct: 172 VVYPQLKP-FLYSGLASASGFGWRAIIMGEVLAQCS-----PGIGGEMKQA 216 >gi|120404386|ref|YP_954215.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium vanbaalenii PYR-1] gi|119957204|gb|ABM14209.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium vanbaalenii PYR-1] Length = 271 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 4/142 (2%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RVV +I+ +I I +G +G + + P Q++ A P PL + Sbjct: 80 TVSGLRVVEGLILGGVIGIALGTAVGLSKWFEATVDPPMQMVRALPHLGLIPLFIIWFGI 139 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L P + LL+ G + + N + E A + W+ +R II+P Sbjct: 140 GEL-PKV---LLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFSFWQRFRSIIVPSAA 195 Query: 504 PYYVTGAITACGGAWNASIVSE 525 P + G + AW IV+E Sbjct: 196 PQVLVGLRQSLAIAWLTLIVAE 217 >gi|254252109|ref|ZP_04945427.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] gi|124894718|gb|EAY68598.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] Length = 291 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI--FGTQWYIL 465 IG + + P ++L PA + PL + + P+ LS++ I G + IL Sbjct: 118 IGRYRALEDALLPPLEVLRPIPAVAWIPLAIL------MFPSSELSMMFITFVGALFPIL 171 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N + GA A A S G+ + +ILPG P TG G AW + +E Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + + + G+G + S ++P++V+G+ ++ Sbjct: 232 MIAGQY------GIGYFTWASYTLQNYPDIVVGMALI 262 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 8/124 (6%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 + R L L+P L++++ IP + ++ ++ F + +EL+ +F F ++ + Sbjct: 119 GRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPS--------SELSMMFITFVGALFPI 170 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + L +RS G+ + + +P + P + + + M WF +V + Sbjct: 171 LLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTA 230 Query: 211 EMIV 214 EMI Sbjct: 231 EMIA 234 >gi|91975513|ref|YP_568172.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] gi|91681969|gb|ABE38271.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] Length = 550 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G+ L A+ + M F +Y ++ I R L S+S +GW FW + P S+PG+ Sbjct: 146 GSTLGVTIAMVQIMLPFMIFPLYSTMVGIDRRLNVASKSLGANGWTTFWRVYWPLSLPGV 205 Query: 193 V 193 V Sbjct: 206 V 206 >gi|121593479|ref|YP_985375.1| binding-protein-dependent transport systems inner membrane component [Acidovorax sp. JS42] gi|120605559|gb|ABM41299.1| binding-protein-dependent transport systems inner membrane component [Acidovorax sp. JS42] Length = 400 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 32/191 (16%) Query: 73 LSAMVISLLFTFV----YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L+ ++ SLLF V + A S R P+LD MQ+ P +L V+ F Sbjct: 177 LALVLTSLLFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFVYLVPVVMLFGI--- 233 Query: 129 GKVIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G + +FA+ ++ N+ L + DL E SR++ S Q W + +P Sbjct: 234 GNVPGVIVTIVFALPPLVRLTNL------GLRQVRPDLIEASRAYGASPLQLLWKVQLPL 287 Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +MP G+ +M+S+S VV + MI VG G+G + I D+ Sbjct: 288 AMPSIMAGINQALMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM---GL 333 Query: 244 AMLTMLGVIFL 254 A + LG++ L Sbjct: 334 ATVGGLGIVLL 344 >gi|227510656|ref|ZP_03940705.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190308|gb|EEI70375.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 309 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%) Query: 75 AMVISLLF---TFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127 A VIS F T VY T +R +L P+ +++ IP + GF+ +VV + N++ Sbjct: 98 AAVISTPFAIGTAVYMT-EISPKRGAKILQPVTELLVGIPSVVYGFIGLSVVVPFVRNVF 156 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G G L+ F +F + + SL ++P + S + + WQ W + + Sbjct: 157 GGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLALGATKWQTIWKVVLRA 215 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + PG++ ++ M+ + +A +M++ +++P Sbjct: 216 ATPGILTAVVFGMARAFGEALAVQMVIGNASLMP 249 >gi|225388708|ref|ZP_03758432.1| hypothetical protein CLOSTASPAR_02444 [Clostridium asparagiforme DSM 15981] gi|225045220|gb|EEG55466.1| hypothetical protein CLOSTASPAR_02444 [Clostridium asparagiforme DSM 15981] Length = 280 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 12/140 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T L + ++++L + + L+ K RR G+ L+ I+ ++Q + + V+ ++L Sbjct: 85 QTGLAVAGQLLVALPAAWAFGALSFKGRR-GLFLIYIILMLQPFQVTMVPNYLVLKRLSL 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNM--TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L + A+ W+ F M + IPR L E + W FW +G Sbjct: 144 ---------LNSHLAVILPAAWSAFPVFIMAKFFETIPRPLMEAAGLDGAGSWMIFWKIG 194 Query: 185 VPFSMPGLVWNMMMSMSGGW 204 VP PG+V M++ + W Sbjct: 195 VPIGKPGIVSAMVLGVLETW 214 >gi|229543164|ref|ZP_04432224.1| binding-protein-dependent transport systems inner membrane component [Bacillus coagulans 36D1] gi|229327584|gb|EEN93259.1| binding-protein-dependent transport systems inner membrane component [Bacillus coagulans 36D1] Length = 260 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 34/212 (16%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ R V +I I +G+ G + Q+L P PLV+ Sbjct: 64 ISLLRAVTGFLIGGSIGFILGLVNGLFRTSELLLDTSVQMLRTIPHLALIPLVI------ 117 Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LW + L+ G + + N G + N E+ + + GWR + ++ Sbjct: 118 -----LWFGIGEEAKIFLVALGVLFPVYLNTFHGIKSVDNGLIEMGKIYGLKGWRMFAHV 172 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 I PG + G + G W IV+E S T+G+G + E ++L Sbjct: 173 IFPGSLSSILVGIRFSLGVMWITLIVAETIS------STSGIGYMAMTAREFMQMDVILL 226 Query: 558 GVLIMCCFVL---ALNRFLWHPLYLYGTRCLR 586 +L+ F A+ RF + RCL+ Sbjct: 227 SILLYALFGKLSDAIARF-------FEKRCLK 251 >gi|269959816|ref|ZP_06174194.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835429|gb|EEZ89510.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 266 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W +K Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWESK 266 >gi|237808099|ref|YP_002892539.1| binding-protein-dependent transport systems inner membrane component [Tolumonas auensis DSM 9187] gi|237500360|gb|ACQ92953.1| binding-protein-dependent transport systems inner membrane component [Tolumonas auensis DSM 9187] Length = 299 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 F YQ +IP+D +E + + WQ +W + VP S P ++ W + Sbjct: 179 FLFYQFFRDIPKDFDEAAAIDGATPWQIYWKVIVPMSGPVFATVAILQFLNMWNQYLWPI 238 Query: 212 MIVVGDTVIPL-PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 M+V G+ PL PGI + + +++A YA + + V+ ++ LLF+ V S Sbjct: 239 MVVQGEAARPLQPGIQQFFGTTTEWGEIMA--YASMVTIPVLIMF--LLFQKKFVRS 291 >gi|218678225|ref|ZP_03526122.1| ABC transporter, membrane spanning protein [Rhizobium etli CIAT 894] Length = 222 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 65 ASRTTLRMLSAMV-ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 AS TL +++ V IS+L F LA++ R+ + P+LDIMQ++P +L V+ F Sbjct: 28 ASMQTLALVTVSVCISVLIAFPLGILASRYRKFEAAIRPVLDIMQTVPPWVYLIPAVMIF 87 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 G+V AI A V M + +P+DL E+ ++ S + + Sbjct: 88 SL---GRV-----PAIIATIVYGVPPMLRLTTLAFSQVPKDLLELGQATGASPRAILFKI 139 Query: 184 GVPFSMPGLVWNM 196 +P + P L+ + Sbjct: 140 EIPAATPTLLVGL 152 >gi|86608833|ref|YP_477595.1| ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557375|gb|ABD02332.1| ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 257 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 19/185 (10%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A ++L+ + ++ SR + L P+L +IP + + ++F + P VI Sbjct: 75 AFALALVGGILLGSIIGSSRLAHLCLYPLLVGFNTIPKVALVPLLAIWFGLGTIPA-VIT 133 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 A L A F I ++ L + ++ +V RS S W+ F +G+P SMP L Sbjct: 134 AFLLAFFPI--------AVNVAVGLETVEAEMRDVLRSLGASSWEIFTKVGLPHSMPYLF 185 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV-- 251 ++ +++S F V S V+ +TV G+G I A D + + +A L LG+ Sbjct: 186 ASLKVAIS---FAFVGS---VISETVASNQGLGYLIVSASSSFD-VPLAFAGLAALGIMG 238 Query: 252 IFLYD 256 I LY Sbjct: 239 ILLYT 243 >gi|26987607|ref|NP_743032.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida KT2440] gi|24982285|gb|AAN66496.1|AE016278_7 glycine betaine/carnitine/choline ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 247 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 38/64 (59%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFA+F + + + + Y+ L N+P L+E + ++ Q+ W + +P ++P +V + Sbjct: 119 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 178 Query: 198 MSMS 201 ++++ Sbjct: 179 VALA 182 >gi|325576579|ref|ZP_08147297.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325161142|gb|EGC73257.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 245 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 15/160 (9%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 + +L+PIL I Q+IP+ V++ P K++ A L F + T + Sbjct: 84 KTSSLLLPILVISQAIPVFAIAPILVLWLGYGMPSKIVMAILIIYFPV--------TAAC 135 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 Y L N P+ +++++F+ S W+ + +P ++P +++S VA V Sbjct: 136 YDGLRNTPQAWIDLAKTFKPSPWRLLLKVRLPAALPAFASGFRIAVS------VAPIGAV 189 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 +G+ V G+G Y+ + + + +++A L +L I L Sbjct: 190 IGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVAISL 228 >gi|298386614|ref|ZP_06996170.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp. 1_1_14] gi|298260991|gb|EFI03859.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp. 1_1_14] Length = 398 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 20/191 (10%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150 L PI++++ IP + GF V+ F +L G+ + G+ + AI A+ T + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKFFDLPVGESGLAGSIILAIMALPT--IITV 269 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A Sbjct: 270 T---EDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326 Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 M+ VI PL I + IA + E Y L +LGV+ + L+ + Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLIINFSV 386 Query: 265 VWSNKFRLERT 275 + + ++R+ Sbjct: 387 EYISSKGIKRS 397 >gi|295110029|emb|CBL23982.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Ruminococcus obeum A2-162] Length = 273 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N + G + EVA +H+ W+ + +I P P+ ++ + A G +W + I++EV Sbjct: 149 NTLQGLNNVDPQLMEVAKVYHMAPWKKFMFIYRPAFMPFVLSASKLALGMSWKSGIMAEV 208 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/174 (21%), Positives = 84/174 (48%), Gaps = 17/174 (9%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LR+ ++S + F+ A + + + + L PI+ +++++P++ F+ +++ Sbjct: 75 LRIAVGFILSFVAGFLLALVCHRFKLIRDFLEPIIVMLKTVPMISFVIMLLIW------- 127 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 +G + I+ F + + + Q L N+ L EV++ + ++ W+KF ++ P M Sbjct: 128 --VGNQALTIYLSFLIVLPIIYTNTLQGLNNVDPQLMEVAKVYHMAPWKKFMFIYRPAFM 185 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA---IKEQDLLA 240 P ++ +++ W + +E V+G P P IG + A ++ DL A Sbjct: 186 PFVLSASKLALGMSWKSGIMAE--VIGT---PKPSIGREMYAAKSYLQTADLFA 234 >gi|254455113|ref|ZP_05068548.1| choline ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198263523|gb|EDY87795.1| choline ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 277 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 14/105 (13%) Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P+LD+MQ+IP +L ++ F + + PG + A I +Q+ + + Sbjct: 130 PVLDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFALPAPIRLTQL---------GITS 180 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 P L E +SF + Q W + +P+++P GL +M+S+S Sbjct: 181 TPTALIEAGKSFGSTPMQLLWKVELPYALPQIMAGLTQTIMLSLS 225 >gi|186897091|ref|YP_001874203.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|186700117|gb|ACC90746.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] Length = 264 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 23/215 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I V + SR +L + +++++P L + +++ Sbjct: 60 QHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILW 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + Y + NI L E++RS+ LSG++ Sbjct: 120 FGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDSGLLEMARSYGLSGFRLLTQ 171 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 172 VVLPGALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVV 224 Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 + + +LG L D QLL R + W ++ Sbjct: 225 VVAIVLYALLGK--LADGSAQLLERVWLRWHPAYQ 257 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 21/205 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R ++ I I + +G+ G + Q++ P PLV+ + Sbjct: 63 TISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVIL---W 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G + E+A S+ ++G+R ++LPG Sbjct: 120 FGIDESAKI-FLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S +G+G Y+A + + +VV+ +++ Sbjct: 179 PSIMVGVRFALGFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIVLY 231 Query: 564 CFVLALNR----------FLWHPLY 578 + L WHP Y Sbjct: 232 ALLGKLADGSAQLLERVWLRWHPAY 256 >gi|332639110|ref|ZP_08417973.1| sugar ABC transporter permease [Weissella cibaria KACC 11862] Length = 271 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 18/137 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP-----ILGFLTFTVVYFMNLY 127 L +V S+L F +A L ++ VL IL +P I F+T + ++ +N Y Sbjct: 79 LGQLVTSILAAFAFAKLNFSGKK---VLFTILLATMMVPGEMLIIPNFVTLSELHLVNTY 135 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +I LA+ FA+FT + QS ++P L +R S WQ W + VP Sbjct: 136 -GALIVPWLASFFAVFT---------LRQSFASVPDQLYYAARLDGASDWQFLWRVLVPN 185 Query: 188 SMPGLVWNMMMSMSGGW 204 + + ++ + G W Sbjct: 186 AKSTITAIGLLQIIGSW 202 >gi|22124163|ref|NP_667586.1| ABC transporter permease [Yersinia pestis KIM 10] gi|45443650|ref|NP_995189.1| putative aliphatic sulfonates transport permease [Yersinia pestis biovar Microtus str. 91001] gi|51597894|ref|YP_072085.1| ABC aliphatic sulfonates transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108809630|ref|YP_653546.1| putative aliphatic sulfonates transport permease [Yersinia pestis Antiqua] gi|108813704|ref|YP_649471.1| aliphatic sulfonates transport permease protein [Yersinia pestis Nepal516] gi|145597549|ref|YP_001161625.1| aliphatic sulfonates transport permease protein [Yersinia pestis Pestoides F] gi|153997436|ref|ZP_02022536.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis CA88-4125] gi|165927575|ref|ZP_02223407.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165937418|ref|ZP_02225981.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166012001|ref|ZP_02232899.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166214137|ref|ZP_02240172.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167401992|ref|ZP_02307475.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420559|ref|ZP_02312312.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425472|ref|ZP_02317225.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218930636|ref|YP_002348511.1| putative aliphatic sulfonates transport permease [Yersinia pestis CO92] gi|229836766|ref|ZP_04456931.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Pestoides A] gi|229839334|ref|ZP_04459493.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899898|ref|ZP_04515039.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229904210|ref|ZP_04519321.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Nepal516] gi|270488648|ref|ZP_06205722.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294505225|ref|YP_003569287.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Z176003] gi|21956920|gb|AAM83837.1|AE013624_6 putative transport system permease protein of aliphatic sulfonates ABC transporter [Yersinia pestis KIM 10] gi|45438520|gb|AAS64066.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Microtus str. 91001] gi|51591176|emb|CAH22841.1| ABC aliphatic sulfonates transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108777352|gb|ABG19871.1| aliphatic sulfonates transport permease protein [Yersinia pestis Nepal516] gi|108781543|gb|ABG15601.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Antiqua] gi|115349247|emb|CAL22214.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis CO92] gi|145209245|gb|ABP38652.1| aliphatic sulfonates transport permease protein [Yersinia pestis Pestoides F] gi|149289073|gb|EDM39153.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis CA88-4125] gi|165914523|gb|EDR33137.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165920469|gb|EDR37746.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989085|gb|EDR41386.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166204624|gb|EDR49104.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166961365|gb|EDR57386.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048578|gb|EDR59986.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055486|gb|EDR65279.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229678328|gb|EEO74433.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Nepal516] gi|229687390|gb|EEO79465.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695700|gb|EEO85747.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705709|gb|EEO91718.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Pestoides A] gi|262363287|gb|ACY60008.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis D106004] gi|262367334|gb|ACY63891.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis D182038] gi|270337152|gb|EFA47929.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294355684|gb|ADE66025.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Z176003] gi|320017213|gb|ADW00785.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 265 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 23/215 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ + ++ R L I V + SR +L + +++++P L + +++ Sbjct: 61 QHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILW 120 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F K+ L +F I+ + Y + NI L E++RS+ LSG++ Sbjct: 121 FGIDESAKIFLVALGTLFPIY--------LNTYHGIKNIDSGLLEMARSYGLSGFRLLTQ 172 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLL 239 + +P ++P ++ + ++ W ++V +T+ GIG Y+A+ +E D++ Sbjct: 173 VVLPGALPSIMVGVRFALGFMWL------TLIVAETISANSGIG-YLAMNAREFLQTDVV 225 Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 + + +LG L D QLL R + W ++ Sbjct: 226 VVAIVLYALLGK--LADGSAQLLERVWLRWHPAYQ 258 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 21/205 (10%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R ++ I I + +G+ G + Q++ P PLV+ + Sbjct: 64 TISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVIL---W 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ + + L+ GT + I N G + E+A S+ ++G+R ++LPG Sbjct: 121 FGIDESAKI-FLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGAL 179 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S +G+G Y+A + + +VV+ +++ Sbjct: 180 PSIMVGVRFALGFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIVLY 232 Query: 564 CFVLALNR----------FLWHPLY 578 + L WHP Y Sbjct: 233 ALLGKLADGSAQLLERVWLRWHPAY 257 >gi|302186133|ref|ZP_07262806.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae 642] Length = 285 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R LS + I + V A + SRR +VL + ++++IP L + +++F Sbjct: 94 RALSGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQMLRTIPSLALVPLFILWFG------ 147 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E + I + + +++ + NI L E + + LS + W++ +P S+P Sbjct: 148 -IG-EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + S+ W +V E I Sbjct: 206 AFFVGLRYSLGISWLALVFVEQI 228 >gi|296159223|ref|ZP_06842049.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295890482|gb|EFG70274.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 292 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G A P + EVA +F + W+ R +ILP P TG A +W A++ +E Sbjct: 178 GIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAE----- 232 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ++ + +G+G + + +E+ V+ GV+++ ALN Sbjct: 233 YLLVAGSGIGNTLIDGSEQFRMDLVLFGVIVVGVTGWALN 272 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 13/137 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR ++ P D + I + ++ V+F KV+ LAA+ + T Sbjct: 122 SRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALLPV--------TA 173 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + +PR EV+R+FR S WQ + +P ++P + + +++ W + +E Sbjct: 174 HTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEY 233 Query: 213 IVVGDTVIPLPGIGSYI 229 ++V + GIG+ + Sbjct: 234 LLVAGS-----GIGNTL 245 >gi|325275909|ref|ZP_08141756.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] gi|324098959|gb|EGB96958.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] Length = 237 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 38/64 (59%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFA+F + + + + Y+ L N+P L+E + ++ Q+ W + +P ++P +V + Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168 Query: 198 MSMS 201 ++++ Sbjct: 169 VALA 172 >gi|253572872|ref|ZP_04850270.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251837504|gb|EES65597.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 398 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 20/191 (10%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150 L PI++++ IP + GF V+ F +L G+ + G+ + AI A+ T + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKFFDLPVGESGLAGSIILAIMALPT--IITV 269 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A Sbjct: 270 T---EDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326 Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 M+ VI PL I + IA + E Y L +LGV+ + L+ + Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLIINFSV 386 Query: 265 VWSNKFRLERT 275 + + ++R+ Sbjct: 387 EYISSKGIKRS 397 >gi|222086662|ref|YP_002545196.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter K84] gi|221724110|gb|ACM27266.1| proline/glycine betaine ABC transporter [Agrobacterium radiobacter K84] Length = 285 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + T +L++ + +L AA+ L ++ PILD+MQ+IP +L ++ Sbjct: 95 KETTETLALVLASTFVCMLVGVPLGIAAARRPWLYAIMRPILDLMQTIPTFVYLVPAMIL 154 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + + PG + +FAI S MT + + P L E + +F + Q Sbjct: 155 LGLGMVPGLIA----TVVFAIPAS--IRMT---RLGIISTPPSLVEAAEAFGATPRQVLR 205 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + VPF+MP GL +M+S+S Sbjct: 206 KVEVPFAMPQIMAGLTQTIMLSLS 229 >gi|104780260|ref|YP_606758.1| glycine betaine/carnitine/choline ABC transporter permease [Pseudomonas entomophila L48] gi|95109247|emb|CAK13944.1| putative glycine betaine/carnitine/choline ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 237 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 38/64 (59%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFA+F + + + + Y+ L N+P L+E + ++ Q+ W + +P ++P +V + Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168 Query: 198 MSMS 201 ++++ Sbjct: 169 VALA 172 >gi|91226673|ref|ZP_01261362.1| ABC transporter permease protein [Vibrio alginolyticus 12G01] gi|91188970|gb|EAS75253.1| ABC transporter permease protein [Vibrio alginolyticus 12G01] Length = 266 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W +K Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAVLSISLYFITDKLL-KKAIPWESK 266 >gi|121999135|ref|YP_001003922.1| binding-protein-dependent transport systems inner membrane component [Halorhodospira halophila SL1] gi|121590540|gb|ABM63120.1| binding-protein-dependent transport systems inner membrane component [Halorhodospira halophila SL1] Length = 274 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 11/163 (6%) Query: 379 VIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++WL ++ R+ + + +A+ I + VGI G P+ PF +A P P++ Sbjct: 71 LLWLDTGASLGRLGMGVALAAAIGLLVGILNGCLPYARRTFSPFVTAVAMIPPLAVLPIL 130 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L +L++FG +I+ ++ P + A + + W+ + Sbjct: 131 FIAFGVGELAK----VMLIVFGVAPFIMRDLQQRVEELPREQLIKAQTLGASTWQIVLRV 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 ILP P + + G AW I SE + T GLG Sbjct: 187 ILPQTLPRLIDATRLSLGAAWLFLIASEAIA------ATEGLG 223 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 10/125 (8%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ELA + I + + Q + +PR+ +++ S WQ + +P ++P L+ Sbjct: 137 GELAKVMLIVFGVAPFIMRDLQQRVEELPREQLIKAQTLGASTWQIVLRVILPQTLPRLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGV 251 +S+ W F++ASE I + G+G I L + D+ IL A +T+L Sbjct: 197 DATRLSLGAAWLFLIASEAIAATE------GLGYRIFLVRRYLDMETILPYVAWITLLA- 249 Query: 252 IFLYD 256 FL+D Sbjct: 250 -FLFD 253 >gi|99078012|ref|YP_611270.1| binding-protein-dependent transport systems inner membrane component [Ruegeria sp. TM1040] gi|99035150|gb|ABF62008.1| binding-protein-dependent transport systems inner membrane component [Ruegeria sp. TM1040] Length = 269 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 18/156 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 LVP++ + IP + L V++F G G++ A I F FT V + Y ++ Sbjct: 112 LVPLMAAIFPIPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYGAV 162 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS + +P +MPG++ + +S++ +VA+EM+ Sbjct: 163 DNVDRSLIRMGQSFGLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLGAQY- 221 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVI 252 GIG+YI A DL + +L++LGV+ Sbjct: 222 -----GIGAYILEAGSLYDLERLFAGVVILSLLGVL 252 >gi|209550237|ref|YP_002282154.1| binding-protein-dependent transporters inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535993|gb|ACI55928.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 301 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ A + A+ M ++ +L I R L E +R SGWQ W + +P + PG Sbjct: 170 SDFAVVLAMVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG-- 227 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 M+ G FVV M + G + +AL +K Q Sbjct: 228 ------MAIGTIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 264 >gi|126650095|ref|ZP_01722328.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Bacillus sp. B14905] gi|169827315|ref|YP_001697473.1| glycine betaine transport system permease [Lysinibacillus sphaericus C3-41] gi|126593267|gb|EAZ87229.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Bacillus sp. B14905] gi|168991803|gb|ACA39343.1| Glycine betaine transport system permease protein [Lysinibacillus sphaericus C3-41] Length = 284 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 +KS ++ PILD MQ++P +L V +F G V G + IFA+ T ++ N Sbjct: 122 SKSTIAESIIKPILDFMQTMPGFVYLIPAVAFF---GIGIVPGVFASVIFALPPTVRMTN 178 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + +P++L E + S+ + QK + + +P + M G+ +M+S+S Sbjct: 179 L------GIRQVPKELVEAADSYGSTASQKLFKVEIPLAKSTIMAGINQTVMLSLS---- 228 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ + Sbjct: 229 ------MVVIA-SMIGAPGLGREVLTALQRTQV 254 >gi|118467527|ref|YP_886801.1| transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118168814|gb|ABK69710.1| transporter permease 2, putative [Mycobacterium smegmatis str. MC2 155] Length = 262 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 6/112 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 +L NV G P + ++A S W+ +II+P I +TG A A ++ Sbjct: 151 VLINVSTGVQEIPRVYWKLARSVRAGRWQTLTHIIIPAIRRPLLTGIRLAVSLAVVGVVL 210 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 SE + GLG + +S G +P +V ++++ ++ LW Sbjct: 211 SEFFATRR------GLGRVVLQSYSHGDYPSMVATIMLLITISFGISIVLWQ 256 >gi|52079549|ref|YP_078340.1| sugar transporter AmyD [Bacillus licheniformis ATCC 14580] gi|52784913|ref|YP_090742.1| AmyD [Bacillus licheniformis ATCC 14580] gi|52002760|gb|AAU22702.1| sugar transporter AmyD [Bacillus licheniformis ATCC 14580] gi|52347415|gb|AAU40049.1| AmyD [Bacillus licheniformis ATCC 14580] Length = 307 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 30/47 (63%) Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 L ++P+D E ++ SG+Q+FW + +P MP + NM++++ GG Sbjct: 193 GLGSVPKDFYEAAQIDGASGFQQFWKITLPLLMPSVTINMVINIIGG 239 >gi|255526484|ref|ZP_05393394.1| binding-protein-dependent transport systems inner membrane component [Clostridium carboxidivorans P7] gi|296185853|ref|ZP_06854259.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255509803|gb|EET86133.1| binding-protein-dependent transport systems inner membrane component [Clostridium carboxidivorans P7] gi|296049521|gb|EFG88949.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 263 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 25/162 (15%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL------SLLM 456 P+ I +G + + I+PF + + P P+++ LW L + Sbjct: 74 PMAIILGMKKELLPYIEPFLEFMRHVPPIAVIPMLI-----------LWFGIGETSKLAV 122 Query: 457 IFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 IF ++ +F N + G + + EV F + + IILP P +TG G Sbjct: 123 IFLATFFPIFSNTLNGVTNYDEKLLEVGEIFGFSTTDKFFKIILPQAVPSIITGIQLGLG 182 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +W + + +E+ + ++G+G Y+ E+ S P+++L Sbjct: 183 YSWRSLMGAELIA------ASSGIG-YMIMDAEQLSRPDIIL 217 >gi|163856716|ref|YP_001631014.1| putative transport system permease protein [Bordetella petrii DSM 12804] gi|163260444|emb|CAP42746.1| putative transport system permease protein [Bordetella petrii] Length = 262 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ P PLV+ ++ + LSLL + G + + N G + E+ Sbjct: 105 QMVRNIPVLALIPLVIL---WFGIEEAAKLSLLAL-GVFFPVYLNTFHGIRSVDPALIEM 160 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 S+ ++GWR +R +ILPG P + G A G W IV+E S Sbjct: 161 GRSYGLSGWRLYRDVILPGALPSMLVGLRFALGLVWVILIVTETIS 206 >gi|118500401|gb|ABK97399.1| MsmF [uncultured bacterium Sargasso-2222818] Length = 285 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 10/177 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+++ IA+ I +P+G+++G+ P + L P + PL + S P Sbjct: 91 RILIAFAIATGIGVPLGLFMGWSKKFRDYSFPILETLRPIPILAWVPLAILMFSGLE-TP 149 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++L+ L + + N + G ++ + A + + ++++PG P+ T Sbjct: 150 VIFLATL---ASLFVTTLNTLLGVNSIDESYFRAAKCLGASNTDVFLHVVVPGALPFIFT 206 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G + G AW + + +E+ S GLG I +S ++ +V+ +L + F Sbjct: 207 GLEISVGVAWFSLVAAEMVS------GEFGLGYMINDSYMNITYVSMVIAMLTLGFF 257 Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 17/192 (8%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + H Y+ R R+L A I+ S++ PIL+ ++ IPIL ++ Sbjct: 80 EYHDHIYYSCR---RILIAFAIATGIGVPLGLFMGWSKKFRDYSFPILETLRPIPILAWV 136 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F L + A LA++F T + + +I ++ S Sbjct: 137 PLAILMFSGLETPVIFLATLASLFVT--------TLNTLLGVNSIDESYFRAAKCLGASN 188 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 F ++ VP ++P + + +S+ WF +VA+EM V G+ G+G I + Sbjct: 189 TDVFLHVVVPGALPFIFTGLEISVGVAWFSLVAAEM-VSGEF-----GLGYMINDSYMNI 242 Query: 237 DLLAILYAMLTM 248 ++++ AMLT+ Sbjct: 243 TYVSMVIAMLTL 254 >gi|148546145|ref|YP_001266247.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|148510203|gb|ABQ77063.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|313497240|gb|ADR58606.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas putida BIRD-1] Length = 237 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 38/64 (59%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFA+F + + + + Y+ L N+P L+E + ++ Q+ W + +P ++P +V + Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168 Query: 198 MSMS 201 ++++ Sbjct: 169 VALA 172 >gi|307247268|ref|ZP_07529317.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307256309|ref|ZP_07538092.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306856241|gb|EFM88395.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306865135|gb|EFM97035.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 288 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ S +Q+F + +P Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGASAFQRFVRVTIPL 205 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P IG+ I + A+ A+ Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288 >gi|255263921|ref|ZP_05343263.1| glycine betaine transporter, permease protein [Thalassiobium sp. R2A62] gi|255106256|gb|EET48930.1| glycine betaine transporter, permease protein [Thalassiobium sp. R2A62] Length = 343 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/152 (21%), Positives = 76/152 (50%), Gaps = 22/152 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 +KS RL +VPILD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 175 SKSDRLQRSVVPILDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTDL 233 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + + +D+ E + +F ++ QK + +P ++P G+ +MMS++ Sbjct: 234 GIRL------VDQDVIEAANAFGMNSNQKLLKVELPLALPNIMAGVNQTIMMSLA----- 282 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 283 -----MVVIA-SLVSAPGLGVNVLRGIRNLEL 308 >gi|261402938|ref|YP_003247162.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus vulcanius M7] gi|261369931|gb|ACX72680.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus vulcanius M7] Length = 258 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+ +AS + IP+GI +G +++ +LL P + PL ++++ Sbjct: 64 ISIKRVLSGFFLASAVAIPLGILMGHYKTVNNLFDTIIELLRPIPPLAWVPL---SLAWF 120 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L + + ++ G + IL N I+G + P E A + G +++P P Sbjct: 121 GLG-EMSMIFIIFIGAFFPILINTISGVKSVPTPLIEAALTLGAKGRDILLKVVIPASSP 179 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG G AW + +E+ Sbjct: 180 SILTGLRVGAGIAWMCVVAAEM 201 >gi|124485204|ref|YP_001029820.1| hypothetical protein Mlab_0377 [Methanocorpusculum labreanum Z] gi|124362745|gb|ABN06553.1| binding-protein-dependent transport systems inner membrane component [Methanocorpusculum labreanum Z] Length = 253 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 4/141 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++++RV + IIA +I +P+GI +G P + Q+L P + PL ++ Sbjct: 59 VSIYRVTLGFIIACVIAVPLGIILGRYPVLEQFSDSLIQILRPIPPMAWVPLSLAWFG-L 117 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L P L +++ G + IL N I G + E A + + +I+P P Sbjct: 118 GLTPIL---FIIVIGCIFPILVNTIDGVKRVKRSWVETAKIYQANERQIITKVIIPAAGP 174 Query: 505 YYVTGAITACGGAWNASIVSE 525 G G AW + + +E Sbjct: 175 AIWNGLRVGFGIAWMSVVAAE 195 >gi|157369046|ref|YP_001477035.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] gi|157320810|gb|ABV39907.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] Length = 281 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 16/129 (12%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 LAA+S R+ V++P++D+MQ++P +L ++ F GKV I+A T + Sbjct: 116 LAARSDRVRAVMMPLMDVMQTMPSFVYLIPVLMLF---GLGKVPAILATVIYA--TPPLI 170 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 +T + + +++ E +F + WQK + + +P ++P G+ MMS+S Sbjct: 171 RLT---DLGIRQVDKEVMESVTAFGANRWQKLFGVQLPLALPSIMAGINQTTMMSLS--- 224 Query: 205 FFVVASEMI 213 VV + MI Sbjct: 225 -MVVVASMI 232 >gi|154247387|ref|YP_001418345.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154161472|gb|ABS68688.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 283 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 8/127 (6%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 V A SR++ P D ++ IP + +L V++ P KV+ + F +F Sbjct: 107 VLGIAAGLSRKVEQFFGPTFDTIRHIPGIAWLPLIVLWLGIGAPAKVLVIAKSVFFPVF- 165 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + Q + N+ ++ E+++ L+ WQ + +P +MP ++ ++ + W Sbjct: 166 -------LNTLQGIRNVEKNYIELAKVLTLTRWQLVRKVILPAAMPSIMVSLRYAAGLAW 218 Query: 205 FFVVASE 211 VV +E Sbjct: 219 ALVVVAE 225 >gi|333001263|gb|EGK20831.1| inner membrane ABC transporter permease protein yehY [Shigella flexneri VA-6] Length = 223 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 53 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 112 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 113 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 148 >gi|328469976|gb|EGF40887.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio parahaemolyticus 10329] Length = 266 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L + F D+LL + I W NK Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKLL-KKAIPWENK 266 >gi|320161980|ref|YP_004175205.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319995834|dbj|BAJ64605.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 295 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 +WN+ M NIP++L+E +R + WQ W++ +P S+P L + S+ G W Sbjct: 156 IWNVIILM-NFFRNIPKELDEAARIDGANPWQLLWHIYLPTSLPALATITLFSIVGHW 212 >gi|254503977|ref|ZP_05116128.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222440048|gb|EEE46727.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 512 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 4/110 (3%) Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+G++ RP + IQP + PA VF ++ ++++ + MIFG Sbjct: 345 IGIPLGMFAARRPRFYAVIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIFG 401 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + V+ G P +E A +F W + LP P G Sbjct: 402 GTPVVRLTVL-GLRGVPESVREAAIAFGANKWYLLTKVDLPLASPSIRAG 450 >gi|50914290|ref|YP_060262.1| phosphate ABC transporter permease [Streptococcus pyogenes MGAS10394] gi|50903364|gb|AAT87079.1| Phosphate transport system permease protein pstC [Streptococcus pyogenes MGAS10394] Length = 311 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 3/126 (2%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +L P ++++ IP + GF+ V+ FM G L+ + +F + +TF Sbjct: 124 LLQPAVELLIGIPSVVYGFIGLQVIVPFMRAIFGGTGFGILSGVCVLFVMILPTVTFMTT 183 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 SL +PR E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 184 DSLRAVPRHYREASMAMGATRWQTIWRVVLNAARPGIFTAVIFGMARAFGEALAIQMVVG 243 Query: 216 GDTVIP 221 V+P Sbjct: 244 NSAVMP 249 >gi|56962376|ref|YP_174101.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus clausii KSM-K16] gi|56908613|dbj|BAD63140.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Bacillus clausii KSM-K16] Length = 255 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 21/152 (13%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + ++++IP L + +++F GK+ L +F I+ + + + ++ + Sbjct: 98 IQMLRNIPHLALIPLIILWFGIGEEGKIFLIALGVMFPIY--------LNTFHGIRSVDK 149 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 D E+ ++ LS FW++ +P ++P ++ + ++ W ++ +E I D Sbjct: 150 DYIEMGNNYGLSNMAAFWHIILPGALPSILVGLRYALGIMWVTLIVAETIAAKD------ 203 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTML 249 GIG ++A+ +E D++ ILYA+L L Sbjct: 204 GIG-FLAMDAREFMQMDVVVLSIILYALLGKL 234 >gi|254227574|ref|ZP_04921006.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262396163|ref|YP_003288016.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio sp. Ex25] gi|151940186|gb|EDN59012.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262339757|gb|ACY53551.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio sp. Ex25] Length = 266 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L + F D+LL + I W NK Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKLL-KKAIPWENK 266 >gi|332093256|gb|EGI98316.1| inner membrane ABC transporter permease protein yehY domain protein [Shigella boydii 5216-82] Length = 223 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 53 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 112 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 113 VVGLNQIPRDVLESTRAMGMSGAQRFLHVQLPLALP 148 >gi|325300707|ref|YP_004260624.1| phosphate ABC transporter, inner membrane subunit PstC [Bacteroides salanitronis DSM 18170] gi|324320260|gb|ADY38151.1| phosphate ABC transporter, inner membrane subunit PstC [Bacteroides salanitronis DSM 18170] Length = 397 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 18/194 (9%) Query: 92 KSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQV 147 K+R+ L PI++++ IP + GF V+ + + V + LA + + Sbjct: 207 KTRKF---LKPIIELLNGIPSVVYGFFGLAVIVPFLQQTFNLPVGESGLAGSLVLAIMAL 263 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + ++ + PR + E S + + WQ + + +PFS+ G+ +++ + G Sbjct: 264 PTIITVGEDAMRSCPRSMREASLALGATQWQTIYKVVIPFSISGITSGIVLGI-GRAIGE 322 Query: 208 VASEMIVVGDTVI-------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 + ++V G+ + PL I + IA + E Y L +LGVI + L+ Sbjct: 323 TMAVLMVTGNAAVMPHSILEPLRTIPATIAAELGEAPAGGAHYQSLFLLGVILFFITLII 382 Query: 261 R---PMIVWSNKFR 271 ++ NKF+ Sbjct: 383 NSCVEIVSSRNKFK 396 >gi|315181864|gb|ADT88777.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Vibrio furnissii NCTC 11218] Length = 266 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 21/175 (12%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+P+L Q+IP+ +++ KV+ +AAI F +T Y L Sbjct: 108 LLPLLIASQAIPVFAIAPVLMLWLGYGITSKVV---MAAIIIFFP-----VTTCCYDGLR 159 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ V Sbjct: 160 NTPIGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGEWV 213 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 G+G Y+ L + ++ ++A L +L V+ F+ D+LL + I W NK Sbjct: 214 GSSEGLG-YLMLQANARMIIDEMFAALFILAVLSIVLYFITDKLL-KTAIPWENK 266 >gi|296103049|ref|YP_003613195.1| alkanesulfonate transporter permease subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057508|gb|ADF62246.1| alkanesulfonate transporter permease subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 263 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 23/173 (13%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLVEMARSYGLSGFALFINVLLPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 GIG Y+A+ +E D++ ILYA+L L + Q L R + W+ + Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLADV--SAQWLERSWLRWNPAY 256 >gi|312111380|ref|YP_003989696.1| taurine ABC transporter inner membrane protein [Geobacillus sp. Y4.1MC1] gi|311216481|gb|ADP75085.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. Y4.1MC1] Length = 264 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 24/192 (12%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++R+ + +I+A +P+GI+ G +I + P + P ++ L+V Sbjct: 72 SLYRLFLALILAVFTAVPLGIFCGISKYILAIFDPIIEFYRPLPPLAYYALLV------- 124 Query: 446 LNPNLWLSL------LMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + ++F + + LF + ++ P + A S + + YII Sbjct: 125 ----LWLGIDDKSKVALLFLSAFAPLFISTVSSVQRVPQERINGALSLGASKPKVLLYII 180 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG TA G + + +E+ + T+G+G + ++++ V +G Sbjct: 181 LPSCLPDIITGFRTAIGVTYATLVAAEMVA------ATSGIGWMVLDASKYLRSDIVFVG 234 Query: 559 VLIMCCFVLALN 570 +++M + ++ Sbjct: 235 IILMGGIAILMD 246 >gi|297563301|ref|YP_003682275.1| phosphate ABC transporter inner membrane subunit PstA [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847749|gb|ADH69769.1| phosphate ABC transporter, inner membrane subunit PstA [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 359 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY-PGKVIGAELAAIFAIFTSQVWNMTFS 153 R+ ++V +D+M IP + F V +M L+ PG+ GA A A+ V + S Sbjct: 173 RMKRIIVFFVDVMTGIPSIVAGLFVVALWMILFGPGRTNGAAGAIALAVLMIPV--VVRS 230 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + L +P+DL E S + + W+ + +P S GL +M++++ Sbjct: 231 SEEMLRLVPQDLREASYALGVPKWRTITKVVLPTSAAGLTTGIMLAIA 278 >gi|77409210|ref|ZP_00785920.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77172186|gb|EAO75345.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|319745010|gb|EFV97338.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 305 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 6/174 (3%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG-MVLVPILDIMQSIP 111 P +LP A + +LSA++ + + S + G +L P ++++ IP Sbjct: 71 PSAKSFGALPMIAGSFIVTILSAIIATPFAIGAAVFMTEISPKYGSKILQPAVELLVGIP 130 Query: 112 --ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + GF+ ++ + +++ G G L+ + +F + +TF SL +PR +E Sbjct: 131 SVVYGFIGLQIIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDSLRAVPRHYKE 189 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + PG+ ++ M+ + +A +M+V ++P Sbjct: 190 ASLAMGATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVVGNSAILP 243 >gi|319646662|ref|ZP_08000891.1| AmyD protein [Bacillus sp. BT1B_CT2] gi|317391250|gb|EFV72048.1| AmyD protein [Bacillus sp. BT1B_CT2] Length = 308 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 30/47 (63%) Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 L ++P+D E ++ SG+Q+FW + +P MP + NM++++ GG Sbjct: 194 GLGSVPKDFYEAAQIDGASGFQQFWKITLPLLMPSVTINMVINIIGG 240 >gi|303246590|ref|ZP_07332868.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio fructosovorans JJ] gi|302491930|gb|EFL51808.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio fructosovorans JJ] Length = 278 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 26/140 (18%) Query: 77 VISLLFTFVYAT--------LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 +I +LF+ V AT LAA G +++P+LD MQ++P +L + +F Sbjct: 95 IILVLFSTVIATSIGVPLGILAAMRPGWGRIIMPLLDFMQTMPAFVYLIPAIPFF----- 149 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L + AIF++ ++ M ++ + + +P L E + +F + Q+ + + Sbjct: 150 ------GLGPVSAIFSTVIFAMPPAIRLTCLGIRQVPESLTEAADAFGATRMQRLRKVEL 203 Query: 186 PFSMP----GLVWNMMMSMS 201 P ++P G+ +M+S+S Sbjct: 204 PLALPTIMAGINQTIMLSLS 223 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 4/124 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V+ +IA+ I +P+GI RP I P + PA V+ + + ++ Sbjct: 94 TIILVLFSTVIATSIGVPLGILAAMRPGWGRIIMPLLDFMQTMPAFVYL---IPAIPFFG 150 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L P + +IF I + G P E A +F T + R + LP P Sbjct: 151 LGPVSAIFSTVIFAMPPAIRLTCL-GIRQVPESLTEAADAFGATRMQRLRKVELPLALPT 209 Query: 506 YVTG 509 + G Sbjct: 210 IMAG 213 >gi|260776831|ref|ZP_05885725.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio coralliilyticus ATCC BAA-450] gi|260606497|gb|EEX32771.1| hydroxymethylpyrimidine ABC transporter transmembrane component [Vibrio coralliilyticus ATCC BAA-450] Length = 266 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 21/175 (12%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+PIL Q+IP+ +++ KV+ A + F + T Y L Sbjct: 108 LLPILIASQAIPVFAIAPVLMLWLGYGIASKVVMAAMIIFFPVTTC--------CYDGLR 159 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ V Sbjct: 160 NTPTGYLDLAKTMGASKWQMLKHIQLPAALPTLASGIRVAV------VIAPIGAVVGEWV 213 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 G+G Y+ L + ++ ++A L +L ++ F+ D+LL + +I W N+ Sbjct: 214 GSSEGLG-YLMLQANARMIIDEMFAALFILALLSVSLYFITDKLL-KKLIPWENQ 266 >gi|121610976|ref|YP_998783.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121555616|gb|ABM59765.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 290 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LSA +ISL F A+S R+ + P+LD MQ++P +L + F G+V Sbjct: 107 LSATLISLFFGIPLGIGCARSNRVNACVRPVLDFMQTMPAFVYLIPAAMLF---GLGRVP 163 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ V +T + + + E +F + Q + + +P +MP Sbjct: 164 GTIATVIFAM--PPVVRLT---SLGIRQVSTEQVEAGNAFGCTSTQLLFKVQLPIAMPTI 218 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 219 MAGVNQTIMMALS----MVIIASMVGAG-------GLGNDVLASIQRLDI 257 >gi|71279687|ref|YP_268659.1| putative sulfonate ABC transporter permease [Colwellia psychrerythraea 34H] gi|71145427|gb|AAZ25900.1| putative sulfonate ABC transporter, permease protein [Colwellia psychrerythraea 34H] Length = 255 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 14/195 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L + +I++L + + + R+ + +L IM +IP L + ++F Sbjct: 63 TLRRVLLSFIIAMLLGGIIGIMMGVNARINKLSDSLLIIMLNIPALVTILLCYIWF---- 118 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V E AAI A+ +++ + + + + +DL V++ ++LS + F+ + +P Sbjct: 119 -GLV---ESAAIAAVVINKIPTVVVMIREGARAVDKDLLAVAKIYQLSASKTFFNVFLPQ 174 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 P ++ + +S W V+ E++ D G+G + + D+ IL L Sbjct: 175 LYPFIIASARSGLSLIWKIVLVVELLGRSD------GVGFALNTLFQFFDIAGILAYTLV 228 Query: 248 MLGVIFLYDQLLFRP 262 + +I L + L+F+P Sbjct: 229 FVVIILLIEALIFKP 243 >gi|89068073|ref|ZP_01155490.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516] gi|89046312|gb|EAR52369.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516] Length = 258 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 39 IQETTVPRDIV---DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 +Q+ TVP + ++V +D L +A +T R+ +A +S+L L + R Sbjct: 34 LQDPTVPSPVAVVAELVAQVVDGRLLEDFA-KTLARVAAAFAVSMLLGCAIGALLGRVRF 92 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 + P + I +IP + + +M L +E+A + A+ ++ + +M Sbjct: 93 ADGLFAPWIVIGLNIPAI-VVAIVCYIWMGL-------SEIALVTAVAINKTPLVATTMR 144 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + + + + E+++ +R+S W++ + +P MP L+ +S W V+ E V+ Sbjct: 145 EGVRALSAEYRELAQVYRMSPWRRLRLVELPQLMPYLLTAARTGLSLIWKIVLVFE--VL 202 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 G G+G I + D+ AIL L + V+F + RP+ Sbjct: 203 GSD----GGVGFRIGIFFGFFDMTAILAYTLAFICVVFAVEYGAMRPL 246 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 G A +++E+A + ++ WR R + LP + PY +T A T W +V EV Sbjct: 146 GVRALSAEYRELAQVYRMSPWRRLRLVELPQLMPYLLTAARTGLSLIWKIVLVFEV 201 >gi|170723468|ref|YP_001751156.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] gi|169761471|gb|ACA74787.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] Length = 237 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 38/64 (59%) Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFA+F + + + + Y+ L N+P L+E + ++ Q+ W + +P ++P +V + Sbjct: 109 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 168 Query: 198 MSMS 201 ++++ Sbjct: 169 VALA 172 >gi|226945116|ref|YP_002800189.1| aliphatic sulfonate ABC transporter permease [Azotobacter vinelandii DJ] gi|226720043|gb|ACO79214.1| aliphatic sulfonate ABC transporter permease protein [Azotobacter vinelandii DJ] Length = 264 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDAGLVEMARSYGLSGFSLFRQVILPGALPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +L+ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADVAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 TLERLWLRWHPAY 257 Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust. Identities = 28/132 (21%), Positives = 64/132 (48%), Gaps = 15/132 (11%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMVRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDA 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 GLVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE 235 GIG Y+A+ +E Sbjct: 208 GIG-YLAMNARE 218 >gi|332686417|ref|YP_004456191.1| phosphate transport system permease PstA [Melissococcus plutonius ATCC 35311] gi|332370426|dbj|BAK21382.1| phosphate transport system permease protein PstC (TC 3.A.1.7.1) [Melissococcus plutonius ATCC 35311] Length = 305 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 16/167 (9%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA------KSRRLGMVLVPILDIMQSIP 111 V +LP + +LSA LF +A AA +R +L P+++++ IP Sbjct: 79 VGALPMIVGSFIVTLLSA-----LFATPFAIGAAVFMTEISPKRGAKILQPVIELLVGIP 133 Query: 112 --ILGFLTFTVVYFM--NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + GF+ +VV + +++ G G LA F +F + +T +L ++PR E Sbjct: 134 SVVYGFIGLSVVVPLVRSVFGGTGFGI-LAGTFVLFVMILPTVTTMTVDALKSVPRHYRE 192 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 193 ASLALGATRWQTIYKIVLRAAIPGVLTAIIFGMARAFGEALAIQMVI 239 >gi|291003437|ref|ZP_06561410.1| ABC transporter, permease component [Saccharopolyspora erythraea NRRL 2338] Length = 269 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R + +IA I +P+G+ IG+ +S + P +L A P+ V + Sbjct: 80 SLARSLAGFLIAVAIAVPLGVVIGWYGVVSDLLNPLLELFRNTAALALLPVFVLLLGLGE 139 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L++F W IL N I+G + A S + + ++LP + P Sbjct: 140 TSK----VSLIVFACTWPILLNTISGVRTVDPLLIKSARSMGFPPFPLFYKVVLPAVVPT 195 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A + + +E+A GLG I S P++ G++ + Sbjct: 196 VFTGIRLAGANSILVLVAAEMAG------ARAGLGYLINASQFNFQVPQMYAGIITISLL 249 Query: 566 VLALNRFL 573 L N+ L Sbjct: 250 GLGFNQAL 257 >gi|254504128|ref|ZP_05116279.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222440199|gb|EEE46878.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 273 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 19/171 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 LVP++ + +P + L V++F G G++ A I F FT V + Y ++ Sbjct: 116 LVPLVAALFPVPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYGAV 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS + +P +MPG++ + +S++ + A+EM+ G Sbjct: 167 DNVDRTLIRMGQSFGLSWLSIVRKIILPGAMPGILSGLRISLAIAIILLTAAEML--GAE 224 Query: 219 VIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVIF-LYDQLLFRPMIVW 266 GIG+Y+ A ++ + D L +L++LGVI + L R ++VW Sbjct: 225 Y----GIGAYVLQAGSLYDLDRLFAGVVILSLLGVILNMVIGFLERRLLVW 271 >gi|194292746|ref|YP_002008653.1| aliphatic sulphonate ABC transporter, permease protein [Cupriavidus taiwanensis LMG 19424] gi|193226650|emb|CAQ72601.1| putative aliphatic sulphonate ABC transporter, permease protein [Cupriavidus taiwanensis LMG 19424] Length = 281 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 24/235 (10%) Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVV 392 QL S+QR L F + AWQ + Q V+ LG +++RV Sbjct: 43 QLASSQRAHLGLVTFANVPAPSDVVPAAWQLL---------QSPKLVLHLGN-SLYRVFA 92 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 A+ I +G+ IG + + P ++L P + PL + + P+ L Sbjct: 93 GFGAAAAAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAI------LMFPSSEL 146 Query: 453 SLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 S++ I G + IL N I G A S W + ++LP P VTG Sbjct: 147 SMIFITFIGALFPILLNTIHGVERTDPRLIATARSLGARRWTVFPEVLLPAALPSIVTGL 206 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G +W + +E+ + + G+G Y E+ ++ ++V+G+L++ F Sbjct: 207 AIGMGTSWFCLVTAEMIAGQY------GIGYYTWEAYNLQNYADIVVGMLLIGAF 255 >gi|146282357|ref|YP_001172510.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145570562|gb|ABP79668.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 292 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 15/212 (7%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH----FTYQDVLY 378 IR L + +S ++W G+A + S G ++ +T + +L Sbjct: 38 IRGELSRRSAWLLTGAGLSLPFVVWWLWTALGLADPMFMPSPGAVLERIGRWWTSEGLLG 97 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLV 437 I I+++RV+ +++I +P+G++IG +RP + + ++P + PA F PLV Sbjct: 98 DI---GISVWRVMAGFGASALIALPLGLYIGTYRP-VQAFLEPLTDFIRYMPAVAFIPLV 153 Query: 438 VSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + V + +L+IF GT + ++ V P E A + + Sbjct: 154 MLWVGIDEGS-----KVLIIFIGTFFQMVLMVAEDVRRVPMAQIEAAQTMGANRSEIVKL 208 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 +ILP P + CG AW +V+E+ + Sbjct: 209 VILPSAKPALLDTLRITCGWAWTYLVVAELVA 240 >gi|50123217|ref|YP_052384.1| sulfate ester ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49613743|emb|CAG77194.1| sulfate ester ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 543 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/225 (19%), Positives = 101/225 (44%), Gaps = 29/225 (12%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G +P +++ +PI+L +R++ + V +L +RRL Sbjct: 76 GSARAFIPEELIHQLPISL-------------MRLVIGFSGGIALGLVLGSLFGLNRRLN 122 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 + +P+ ++ IP L ++ ++ IG L + + + V +T Sbjct: 123 ALFMPLFTVIAQIPTLAWIPLLMLSLG-------IGEALKLVVLVKSVTV-PVTLYTCAG 174 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + P+ L E+ RS RL YL +P +P ++ + ++ S GW ++A E++ + Sbjct: 175 IQQTPQKLHEMVRSLRLPPVAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE 234 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261 G+G Y+ + ++ +L +++ + ++G++ F +++L + Sbjct: 235 ------GLG-YLLVQSRQLFMLDLVFVCILIIGILGFTGERVLLK 272 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AG P E+ S + + RY+ILP + PY +TG A W A I E+ + Sbjct: 173 AGIQQTPQKLHEMVRSLRLPPVAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLA- 231 Query: 530 GHIHLRTTGLGAYIAESTE 548 + GLG + +S + Sbjct: 232 -----SSEGLGYLLVQSRQ 245 >gi|28899989|ref|NP_799644.1| ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|260363283|ref|ZP_05776152.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260880570|ref|ZP_05892925.1| ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260898477|ref|ZP_05906973.1| ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|28808272|dbj|BAC61477.1| ABC transporter permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085008|gb|EFO34703.1| ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308091930|gb|EFO41625.1| ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308112043|gb|EFO49583.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 266 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 25/177 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE--LAAIFAIFTSQVWNMTFSMYQS 157 L+PIL Q+IP+ F + + L+ G I ++ +AAI F +T Y Sbjct: 108 LLPILIASQAIPV-----FAIAPVLMLWLGYGIASKVVMAAIIIFFP-----VTTCCYDG 157 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L N P +++++ S WQ ++ +P ++P L + +++ V+A VVG+ Sbjct: 158 LRNTPTGYLDLAKTMGASKWQLLRHIQLPAALPTLASGIRVAV------VIAPIGAVVGE 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 V G+G Y+ L + ++ ++A L +L + F D+LL + I W NK Sbjct: 212 WVGSSEGLG-YLMLQANARMIIDEMFAALFILAALSIALYFTTDKLL-KKAIPWENK 266 >gi|284047718|ref|YP_003398057.1| binding-protein-dependent transport systems inner membrane component [Acidaminococcus fermentans DSM 20731] gi|283951939|gb|ADB46742.1| binding-protein-dependent transport systems inner membrane component [Acidaminococcus fermentans DSM 20731] Length = 265 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%) Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 +++ V A D +E AS + T W+ +RY+ P I P V GA+ A+ SI Sbjct: 145 FVIITVGARLEGCRQDLEEAASDLYATPWQAFRYVTFPMILPGVVAGALM----AFTLSI 200 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 V S+ +T L YI ++G P++ Sbjct: 201 DDFVISFFVAGPNSTTLPLYIYAMVKRGISPQI 233 >gi|239983080|ref|ZP_04705604.1| transport system integral membrane protein [Streptomyces albus J1074] gi|291454911|ref|ZP_06594301.1| transport system integral membrane protein [Streptomyces albus J1074] gi|291357860|gb|EFE84762.1| transport system integral membrane protein [Streptomyces albus J1074] Length = 305 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 11/214 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G + + + +L IW ++ R ++ + A I P+G+ + + + I P Sbjct: 88 GEVTDAWYQGTLLGYIW---TSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSG 144 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ + P V + LN + +++++ G I +++G P + Sbjct: 145 LQSLPSVAWVP---PAVIWLGLNDQMMFAVILL-GAVPSIANGLVSGVDQVPPLYLRAGR 200 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYI 543 + TG R +I++P P Y+ G +W + + +E +AS + + GLG + Sbjct: 201 TLGATGLRGTWHIVMPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPELGI---GLGQLL 257 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 S V L +L++ +A++ ++ PL Sbjct: 258 ENGRVASSMSMVFLAILLILVVGVAIDLLIFSPL 291 >gi|260459618|ref|ZP_05807872.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gi|259034420|gb|EEW35677.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 281 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 6/136 (4%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PFA +L P FPL+ + Y N L L + IL N G ++ + Sbjct: 114 PFAIVLQVTPIVAIFPLI----NIYVDNQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNL 169 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 +++ T W+ RY+ LP PY++ G A G + ++V+E + +++GL Sbjct: 170 RDLFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVA--GTTGQSSGL 227 Query: 540 GAYIAESTEKGSFPEV 555 + I E+ + + P + Sbjct: 228 ASRIIEAGYRLNAPRL 243 >gi|218886146|ref|YP_002435467.1| glycine/betaine ABC transporter permease [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757100|gb|ACL07999.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 280 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 18/119 (15%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 AA S R V++P+LD+MQ++P +L + +F L + A+F + ++ Sbjct: 117 AAMSDRARAVVMPVLDVMQTMPAFVYLIPAIPFF-----------GLGKVAAVFATVIFA 165 Query: 150 MTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 M ++ + +P +L E + +F +Q+ L +P + P G+ +M+++S Sbjct: 166 MPPAIRFTCLGIRQVPAELVECAEAFGTGRFQRLVKLELPLAAPTMLAGVNQTVMLALS 224 >gi|209516867|ref|ZP_03265717.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209502683|gb|EEA02689.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 292 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L ++ FV +LA S R+G L+ +L M +P + L +++F L G Sbjct: 99 LLRGYLLGAALAFVLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + + +W + + Y ++P L+ R++ L+G + + VP ++P Sbjct: 157 LL-------FVLVHAVLWPLALNTYSGFQSVPATLKMTGRNYGLTGLRHVLLILVPAALP 209 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 210 SILAGLRVGWAFAWRTLIAAELV 232 >gi|116253110|ref|YP_768948.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257758|emb|CAK08856.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 304 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ A + A+ M ++ +L I R L E +R SGWQ W + +P + PG Sbjct: 173 SDFAVVLAMVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPG-- 230 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 M+ G FVV M + G + +AL +K Q Sbjct: 231 ------MAIGTIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 267 >gi|319901743|ref|YP_004161471.1| phosphate ABC transporter membrane protein 1, PhoT family [Bacteroides helcogenes P 36-108] gi|319416774|gb|ADV43885.1| phosphate ABC transporter membrane protein 1, PhoT family [Bacteroides helcogenes P 36-108] Length = 394 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 12/197 (6%) Query: 75 AMVISLLFTFVYATLAAKSRRLGM--VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYP 128 A++++L F A ++ G+ ++ P+++++ IP + GF V+ + + Sbjct: 185 AILMALPFGLAVAIYMSEVANSGIRNLMKPVIELLSGIPSVVYGFFGLIVIVPFIQKTFD 244 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 V + LA + + + +L N PR + E S + S WQ + + +P+S Sbjct: 245 LPVGESGLAGSIVLAIMALPTIITVTEDALRNCPRAMREASLALGASQWQTIYKVVIPYS 304 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAIL 242 + G+ +++ + +A M+ VI PL I + IA + E Sbjct: 305 ISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGSH 364 Query: 243 YAMLTMLGVIFLYDQLL 259 Y L +LGV+ + LL Sbjct: 365 YEALFLLGVVLFFISLL 381 >gi|146343621|ref|YP_001208669.1| permease [Bradyrhizobium sp. ORS278] gi|146196427|emb|CAL80454.1| Putative permease of the binding-protein-dependent transport system family [Bradyrhizobium sp. ORS278] Length = 247 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/165 (20%), Positives = 75/165 (45%), Gaps = 15/165 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ +++P + + +VYF ELA + +F + ++ MY+ + I Sbjct: 88 PLINFFRALPPIALIPLVIVYFGV--------DELAKLVILFYAAFFSGVIVMYEGVSQI 139 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 V+++ + + F + +P ++P ++ + +++ W +VASE+I Sbjct: 140 TPLYIRVAQTLGATELETFLKVIIPLTVPHILTALRVALGVTWATLVASELIAAQR---- 195 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 G+G+ I A LL ++Y + +G + L L R + W Sbjct: 196 --GLGATIQNA-STYFLLDVIYVGIICIGAVALIMDTLLRRLSAW 237 >gi|107025580|ref|YP_623091.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116693237|ref|YP_838770.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|105894954|gb|ABF78118.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116651237|gb|ABK11877.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 255 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%) Query: 69 TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121 TL L + +S L + A A A +R G +P+ +DI Q+ P + L V Sbjct: 62 TLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPA 121 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 L P +I L + IF S + L ++PRD+ + +R +SGWQ+ Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172 Query: 182 YLGVPFSMPGLVWNMMMSM 200 + +P + P +V + +++ Sbjct: 173 SVELPLAFPVIVNGIRLAV 191 >gi|329940251|ref|ZP_08289533.1| transport system integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329301077|gb|EGG44973.1| transport system integral membrane protein [Streptomyces griseoaurantiacus M045] Length = 307 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 18/205 (8%) Query: 73 LSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 +S ++ LF T L A+ + + + PIL +QS+P + ++ V++ Sbjct: 109 VSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVIW------ 162 Query: 129 GKVIGAELAAIFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 +G + + ++A I V ++ + + +P R+ +G + W++ +P Sbjct: 163 ---LGLDNSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLKGTWHIVLPA 219 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++PG V + + W ++A+E+I D + G+G + D+ + A+L Sbjct: 220 ALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMSMVFEAIL 276 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFR 271 +L V D L+F P+ W + R Sbjct: 277 LILVVGIAIDLLIFSPLERWVLRSR 301 Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust. Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 11/204 (5%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 D+L IW ++ R ++ + A I P+G+ + + + I P L + P+ + Sbjct: 100 DLLGYIW---TSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWV 156 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P V + L+ N + +++ G I +++G P F + TG + Sbjct: 157 P---PAVIWLGLD-NSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLKGT 212 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFP 553 +I+LP P YV G +W + + +E +AS+ + + GLG + Sbjct: 213 WHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMS 269 Query: 554 EVVLGVLIMCCFVLALNRFLWHPL 577 V +L++ +A++ ++ PL Sbjct: 270 MVFEAILLILVVGIAIDLLIFSPL 293 >gi|325108444|ref|YP_004269512.1| binding-protein-dependent transporters inner membrane component [Planctomyces brasiliensis DSM 5305] gi|324968712|gb|ADY59490.1| binding-protein-dependent transport systems inner membrane component [Planctomyces brasiliensis DSM 5305] Length = 258 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 22/155 (14%) Query: 436 LVVSCVSY---YHLNPNLWLSLLMI----FGTQWYI-------LFNVIAGAS----AFPN 477 L +SC Y H P + +S L+I +G+Q I LF VI GA+ + Sbjct: 91 LRISCYPYAIFLHTVPIVAISPLIITWFGYGSQSVIVITFIVSLFPVITGATNGLLSAST 150 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + KE+ + +H + W+ + P P VTGA TA G A +IV E + Sbjct: 151 ELKELFALYHASRWQTLLKLKFPAAVPQLVTGAQTASGMAVVGAIVGEF--FAGYDSGAY 208 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG YI + +G F VL ++ +L + F Sbjct: 209 GLGYYIFAA--QGQFRTDVLLAAVLLSTLLGIALF 241 >gi|298292916|ref|YP_003694855.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296929427|gb|ADH90236.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 201 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L P ++ + IP L +L +++F IG EL+ + IF S + + Sbjct: 41 LLDPPIEFYRPIPPLAYLPLMIIWFG-------IG-ELSKVLLIFLSVFAPVALGARAGV 92 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + + + SF S W+ ++ +P S+P ++ M + + GW +VA+EMI + Sbjct: 93 KSAAIEQIHAAYSFGASRWKVLCHVILPASLPEILTAMRIGIGFGWTTLVAAEMIAATE- 151 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270 G+G + A + ++ ++ + + L+D +L+ R ++ W K Sbjct: 152 -----GLGYMVLSASQFLQTSTVIMGIVVIAAIACLFDMLMRLIERRIVPWKGKM 201 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 10/165 (6%) Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+G+ +G P I + P + P + PL++ L+ L L L +F Sbjct: 24 VGIPLGLAMGMSPAIRGLLDPPIEFYRPIPPLAYLPLMIIWFGIGELSKVL-LIFLSVFA 82 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + AG + + A SF + W+ ++ILP P +T G W Sbjct: 83 P---VALGARAGVKSAAIEQIHAAYSFGASRWKVLCHVILPASLPEILTAMRIGIGFGWT 139 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + +E+ + T GLG + +++ V++G++++ Sbjct: 140 TLVAAEMIA------ATEGLGYMVLSASQFLQTSTVIMGIVVIAA 178 >gi|197118115|ref|YP_002138542.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197087475|gb|ACH38746.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 295 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 9/122 (7%) Query: 93 SRRLGMVLVPILD-IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 S R G L+ IL +P + L ++++F + + +F + + +W M Sbjct: 122 STRFGNDLMEILTATFNPLPPIALLPVSLIWFGL--------GQASIVFVLVHAVLWPMA 173 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + I + V R++ L+GW+ W + P + P L+ + + + GW ++A+E Sbjct: 174 LNAHTGFTGITPTIRMVGRNYGLTGWRFAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAE 233 Query: 212 MI 213 ++ Sbjct: 234 LV 235 >gi|152997518|ref|YP_001342353.1| binding-protein-dependent transporter inner membrane component [Marinomonas sp. MWYL1] gi|150838442|gb|ABR72418.1| binding-protein-dependent transport systems inner membrane component [Marinomonas sp. MWYL1] Length = 281 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T + ++SA IS+L AA L L PILD+MQ+IP +L T++ F + Sbjct: 95 QTLVLVVSATAISVLIGVPIGIAAAHRPWLYTTLRPILDLMQTIPTFVYLIPTLILFGLG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 PG + IFAI + +T Y + +P +L E +F + + + + + Sbjct: 155 YVPGLI----STIIFAI--AAPIRLT---YLGVSKVPNELIEAGLAFGCTKSKLLYKVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P +MP G+ +M+S+S Sbjct: 206 PAAMPNIMAGVTQCIMLSLS 225 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 32/182 (17%) Query: 349 FCVVCGVAIGIAW---QSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIAS----II 400 F V+ + +G+ W +SIG ++ F +L +I +G I + +VL++ A+ +I Sbjct: 54 FAVITIILVGV-WFLHRSIGLLI--FITLSLLLIINMGYWIETIQTLVLVVSATAISVLI 110 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-SLLMIFG 459 +P+GI RP + + ++P L+ P ++ +L P L L L + G Sbjct: 111 GVPIGIAAAHRPWLYTTLRPILDLMQTIP------------TFVYLIPTLILFGLGYVPG 158 Query: 460 TQWYILFNVIA-------GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 I+F + A G S PN+ E +F T + + LP P + G +T Sbjct: 159 LISTIIFAIAAPIRLTYLGVSKVPNELIEAGLAFGCTKSKLLYKVELPAAMPNIMAG-VT 217 Query: 513 AC 514 C Sbjct: 218 QC 219 >gi|110680132|ref|YP_683139.1| glycine betaine transporter, permease protein [Roseobacter denitrificans OCh 114] gi|109456248|gb|ABG32453.1| glycine betaine transporter, permease protein [Roseobacter denitrificans OCh 114] Length = 344 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/152 (20%), Positives = 76/152 (50%), Gaps = 22/152 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S L ++VPILD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 176 SRSNTLQRMIVPILDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTDL 234 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + + D+ E + +F ++ QK W + +P ++P G+ +MMS++ Sbjct: 235 GIRL------VDPDVIEAADAFGMTKRQKLWGVQLPLALPNIMAGVNQTIMMSLA----- 283 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 284 -----MVVIA-SLVSAPGLGVLVLRGIRNLEL 309 >gi|299143677|ref|ZP_07036757.1| putative ABC transporter, permease protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518162|gb|EFI41901.1| putative ABC transporter, permease protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 261 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 11/87 (12%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N+I G + ++ ++A F ++ R YI L + P+ ++G A G AW + + +EV Sbjct: 151 NLIEGLISIDENYLDMAKIFDVSFNRKLNYIYLSHLKPFIISGLSLAFGMAWKSGLAAEV 210 Query: 527 ASWGH-----------IHLRTTGLGAY 542 S + I+L T L AY Sbjct: 211 ISLPNFGIGTLIYNCKIYLDTVNLFAY 237 >gi|229590252|ref|YP_002872371.1| putative integral membrane transport protein [Pseudomonas fluorescens SBW25] gi|229362118|emb|CAY49020.1| putative integral membrane transport protein [Pseudomonas fluorescens SBW25] Length = 274 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 8/153 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ S + R+L I V+A SR L P ++SIP L ++ +++ Sbjct: 73 KHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLW 132 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 K++ + A F ++ + V ++ +I R L EV + + + + Sbjct: 133 LGIDETSKIVLIAIGAFFPVYLNGV--------AAIRDIDRKLVEVGQMYGFNRRRLVRR 184 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P ++PGL + +S W F+VA+E+I Sbjct: 185 ILLPAALPGLFTGLRSGLSLAWMFLVAAELIAA 217 >gi|227327597|ref|ZP_03831621.1| sulfate ester ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 531 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 42/219 (19%), Positives = 101/219 (46%), Gaps = 29/219 (13%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 +P +++ +PI+L +R++ + V +L +RRL + +P+ Sbjct: 70 IPEELIHQLPISL-------------IRLVIGFSGGIALGLVLGSLFGLNRRLNALFMPL 116 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 ++ IP L ++ ++ IG L + + + V +T + P+ Sbjct: 117 FTVIAQIPTLAWIPLLMLSLG-------IGEALKLVVLVKSVTV-PVTLYTCAGIQQTPQ 168 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS RL YL +P +P ++ + ++ S GW ++A E++ + Sbjct: 169 KLYEMARSLRLPPAAFLRYLILPAMLPYVMTGIRLAFSTGWVALIAVELLASSE------ 222 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQLLFR 261 G+G Y+ + ++ +L +++ + ++G++ F +++L + Sbjct: 223 GLG-YLLVQSRQLFMLDLVFVCILIIGILGFAGERVLLK 260 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AG P E+A S + + RY+ILP + PY +TG A W A I E+ + Sbjct: 161 AGIQQTPQKLYEMARSLRLPPAAFLRYLILPAMLPYVMTGIRLAFSTGWVALIAVELLA- 219 Query: 530 GHIHLRTTGLGAYIAESTE 548 + GLG + +S + Sbjct: 220 -----SSEGLGYLLVQSRQ 233 >gi|225181817|ref|ZP_03735254.1| binding-protein-dependent transport systems inner membrane component [Dethiobacter alkaliphilus AHT 1] gi|225167490|gb|EEG76304.1| binding-protein-dependent transport systems inner membrane component [Dethiobacter alkaliphilus AHT 1] Length = 245 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 27/214 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAA--KSRRLGMVLVPILDIMQSIPILGFLTFTV 120 +Y + +++AMV+++L + K RR+G V+ ++I Q++P L L Sbjct: 50 RYLREHVVLVIAAMVLAVLVGIPVGIMLTRPKLRRIGKVIETFVNIGQTVPSLAILALFF 109 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 VY + A+FA++ + + + Y + +I ++ E +R ++ W+ Sbjct: 110 VYLGLGFN--------TALFALWLYSILPILRNTYAGITSIEPEILEAARGMGMTPWRTL 161 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD----TVIPLPGIGSYIALAIK-E 235 + + +P ++P L M+G V S +I VG T I +G I I+ Sbjct: 162 YKIELPLALPVL-------MAG----VRTSTVICVGTATLATFIGGGALGDLIKTGIQVR 210 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 +D+L A L+ L I L D L + I NK Sbjct: 211 RDILVFTGAGLSALLAILL-DYLAGQAEIAILNK 243 >gi|224535457|ref|ZP_03675996.1| hypothetical protein BACCELL_00320 [Bacteroides cellulosilyticus DSM 14838] gi|224522923|gb|EEF92028.1| hypothetical protein BACCELL_00320 [Bacteroides cellulosilyticus DSM 14838] Length = 394 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 20/176 (11%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-------VYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +L PI++++ IP + GF V V+ + + + G+ + AI A+ T + Sbjct: 211 LLKPIIELLSGIPSVVYGFFGLIVIVPLIQKVFDLPVGESGLAGSIVLAIMALPT--IIT 268 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A Sbjct: 269 VT---EDAMRNCPRAMREASLALGASQWQTIYKVVIPYSVSGITSGVVLGIGRAIGETMA 325 Query: 210 SEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 M+ VI PL I + IA + E Y L +LGV+ + LL Sbjct: 326 VLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGAHYEALFLLGVVLFFISLL 381 >gi|170748909|ref|YP_001755169.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] gi|170655431|gb|ACB24486.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] Length = 283 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 16/146 (10%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A V++LL A SR V P+LD+MQ++P + VY + P +GA Sbjct: 101 ATVMALLIGIPVGIWFALSRWAWKVFSPVLDMMQTLP-------SFVYLIPALPFFGLGA 153 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP---- 190 ++A FA V + + N+P +L E S +F S QK + +P ++P Sbjct: 154 -VSACFATIIFSVPPVIRLTTLGIRNVPTELIEASDAFGGSATQKLLKVQLPLALPTIMA 212 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVG 216 G+ MM+++S VV + MI G Sbjct: 213 GVNQTMMLALS----MVVIAAMIGAG 234 >gi|126730168|ref|ZP_01745980.1| ABC transporter permease protein [Sagittula stellata E-37] gi|126709548|gb|EBA08602.1| ABC transporter permease protein [Sagittula stellata E-37] Length = 270 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 S+ +L +P LEE S S +GWQ F + +P MPGL +M G + F+ + ++ Sbjct: 158 SIAAALRQVPSSLEEASASLGATGWQTFRLVILPLVMPGL------AMGGIFAFINSFDL 211 Query: 213 IVVGDTVIPLPG 224 + + PL G Sbjct: 212 YTISLLLKPLGG 223 >gi|192291272|ref|YP_001991877.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris TIE-1] gi|192285021|gb|ACF01402.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 280 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +RRL L P + +++IP + ++ +++ KV + F ++ Sbjct: 110 ARRL---LDPTVQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY--------L 158 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + ++ ++ R + EV R+FRLSG + +P +P V + + + GW FVVA+E Sbjct: 159 GVMGAIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVLALRVGLGLGWMFVVAAE 217 >gi|91780224|ref|YP_555431.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692884|gb|ABE36081.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 292 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L ++ FV +LA S R+G L+ +L M +P + L +++F L G Sbjct: 99 LLRGYLLGAALAFVLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + S +W + + Y ++P L R++ L+G + + VP ++P Sbjct: 157 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGMRHVLLILVPAALP 209 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 210 SILAGLRVGWAFAWRTLIAAELV 232 >gi|307729437|ref|YP_003906661.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] gi|307583972|gb|ADN57370.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] Length = 285 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 8/161 (4%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L + + R S I + SR ++ P D + I + ++ Sbjct: 79 ALAKALGASLAREASGFAIGTVLGLALGISLGLSRLASRMIGPSFDTFKQISLFAWIPLI 138 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V+F KV+ LAA+ + + +PR E +R FR + WQ Sbjct: 139 SVWFGLGDAAKVVFLSLAALLPVAAHTC--------DGIHAVPRSYVEAARVFRYTRWQL 190 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 W++ +P ++P + + +++ W + +E ++V + I Sbjct: 191 VWHVILPAALPSIFTGLYLALIYSWLATLGAEYLLVAGSGI 231 >gi|317407312|gb|EFV87284.1| binding-protein-dependent transport system inner membrane component [Achromobacter xylosoxidans C54] Length = 241 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 14/167 (8%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRRL ++P + + IP+L +L F ++ P K I AA+ + T Sbjct: 69 SRRLEAYVLPTFNALVQIPVLAWLPFVLLIVGIGEPLKYILIAKAALVPV--------TL 120 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Q L EV+R + S Q+ + VP ++P L + + + W +V E+ Sbjct: 121 NTLQGFRQASPALREVARVYGYSRRQEVLEVVVPLALPTLFTGLRLGFTKAWLSLVVVEL 180 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + + G+G I + L ++ A++ + + + D+LL Sbjct: 181 VASSE------GLGYLIVYGRQLFQLDLVMAAVIVVGAIGYAIDRLL 221 >gi|332978589|gb|EGK15295.1| glycine/betaine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Psychrobacter sp. 1501(2011)] Length = 662 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 19/193 (9%) Query: 70 LRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 ++ ++ +++S+L T V L A S L V+ P+LD+MQ++P +L ++ F Sbjct: 456 VQTMALLIVSVLVTMVIGIPIGILMAGSNVLRKVVTPVLDVMQTMPSFVYLIPVLMLFG- 514 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 IG ++ A+FA + + +P ++ E RSF + Q +++ + Sbjct: 515 ------IG-KVPALFATVIYASPPLIRLTMLGIKQVPHEMVEAGRSFGSTHTQLLFWIKL 567 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + M+G V+ S +VV ++I PG+G + +I+ ++ L A Sbjct: 568 PQALPNI-------MAGVNQAVMMSLSMVVLASMIGAPGLGEDVLQSIQTLNIGQGLQAG 620 Query: 246 LTMLGVIFLYDQL 258 ++ + + D++ Sbjct: 621 TAIVIMAIIIDRI 633 >gi|312197288|ref|YP_004017349.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EuI1c] gi|311228624|gb|ADP81479.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EuI1c] Length = 319 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 24/239 (10%) Query: 38 GIQETTVPRDIVDIVPITLDV-------HSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90 G + +P I+D P +D H L S + R + + L V+ Sbjct: 88 GSETGLIPARILDSPPTVVDALGHLISTHQLQDALSISLRRAGVGLALGLAVGLVFGLTT 147 Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 SR +L + +++ IP L VV+F K + A F I+ Sbjct: 148 GLSRLGEELLDATMQMVRMIPFLAITPLVVVWFGIGETAKTVLIAFACTFPIY------- 200 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + Y ++ I L E +R F + G+ + +P +MPG++ + SM ++A+ Sbjct: 201 -LNTYAAVRAIDPKLIEAARVFGVRGFALTRRIIIPNAMPGILVGLRYSMGVSILALIAA 259 Query: 211 EMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILYAMLTMLG-VIFLYDQLLFRPMIVW 266 E I G+G + A D++ L + T+LG +I L+ ++L R ++ W Sbjct: 260 EQINADS------GLGYLVGNAQDAFRNDIILALLLVYTVLGLLIDLFVRILERVLLPW 312 >gi|218885624|ref|YP_002434945.1| ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756578|gb|ACL07477.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 265 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI +I++ IP + ++ T+ +F PGK IF I+ + + Y + Sbjct: 109 PIFEIIRPIPPVAWIPLTIFWFGIGLPGK--------IFIIWLGGLVPCVINAYVGVKMT 160 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L +++R++ S WQ F L +P ++P + + ++++ W +VA+E++ Sbjct: 161 NPTLIQMARTYGASDWQIFKQLCIPSALPMVFGALQIALACCWTNLVAAELL 212 >gi|297182135|gb|ADI18307.1| ABC-type sugar transport system, permease component [uncultured Rhodobacterales bacterium HF4000_03E16] Length = 389 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 37/69 (53%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +P++LEE +R +S WQ FWY+ +P + P +V ++M + W + +I + + Sbjct: 276 QLPKELEEAARVEGVSQWQIFWYVMLPLAKPMVVTVLIMQVLNAWNDFLLPLVITLANPA 335 Query: 220 IPLPGIGSY 228 I +G Y Sbjct: 336 IRTLSVGIY 344 >gi|227327215|ref|ZP_03831239.1| putative taurine transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 257 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 28/166 (16%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R + +A I+ +P+G+ +G P I++ PF Q L P PL V Sbjct: 63 AVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLAV----- 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494 +WL + ++++++F +V+ GA A + VA + + + + Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIF 169 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +++LP P T A G W + I +E+ + T+G+G Sbjct: 170 FHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMVA------ATSGIG 209 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL ++ + + R LSA ++++ L S + V P + ++ +P + + Sbjct: 57 SLWEHIAVSVARALSAFSVAIILGVPLGLLMGLSPPIAAVFNPFVQFLRPLPKIALIPLA 116 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 VV+ IG E + F IF + ++ ++ + R V+++ S Q Sbjct: 117 VVWLG-------IG-EASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQI 168 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 F+++ +P ++P L + +++ GW ++A+EM+ Sbjct: 169 FFHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMV 202 >gi|119488909|ref|ZP_01621871.1| Binding-protein-dependent transport systems inner membrane component [Lyngbya sp. PCC 8106] gi|119455070|gb|EAW36212.1| Binding-protein-dependent transport systems inner membrane component [Lyngbya sp. PCC 8106] Length = 270 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 13/124 (10%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM-NL 126 T + ++A V+ LL A L A+S+ + L P I+Q++P+ +++ N Sbjct: 75 TVVAFITAAVLGLLI----AMLMAQSKWIEKSLYPYAVILQTVPLAAIAPLIIIWLRNNT 130 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + V+ A + A F I + N TF L ++ +L ++ R ++ S WQ YL +P Sbjct: 131 FAALVLCAWIVAFFPIIS----NTTF----GLNSVDSNLRDLFRLYKASRWQTMLYLRLP 182 Query: 187 FSMP 190 ++P Sbjct: 183 SALP 186 >gi|149915311|ref|ZP_01903838.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. AzwK-3b] gi|149810600|gb|EDM70441.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. AzwK-3b] Length = 278 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 16/118 (13%) Query: 91 AKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 A + R G+ L P+LD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 117 ATAHRPGLYRGLRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLI-----ATVIFVVPAPI 171 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T + + + P+ L E +++F + Q W + +P+++P GL +M+S+S Sbjct: 172 -RLT---HLGISSTPKPLLEAAQAFGATPRQTLWKVELPYALPQIMAGLNQTIMLSLS 225 >gi|281358476|ref|ZP_06244957.1| binding-protein-dependent transport systems inner membrane component [Victivallis vadensis ATCC BAA-548] gi|281315099|gb|EFA99131.1| binding-protein-dependent transport systems inner membrane component [Victivallis vadensis ATCC BAA-548] Length = 279 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 12/119 (10%) Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 A L S RL V++P+LDIMQ++P +L + +F + A +FA Sbjct: 111 AVLMTFSGRLKKVVLPLLDIMQTMPAYVYLVPAIAFFSI--------SNTAGVFATVVFA 162 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM----PGLVWNMMMSMS 201 + + + N P+DL E S +F + + + L +P ++ GL +M+++S Sbjct: 163 LPPIVRMTVLGIENTPKDLLECSEAFGATPMNRLFDLELPTALTSIRAGLNQTVMLALS 221 >gi|184157612|ref|YP_001845951.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acinetobacter baumannii ACICU] gi|332874575|ref|ZP_08442476.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] gi|183209206|gb|ACC56604.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii ACICU] gi|332737213|gb|EGJ68139.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] Length = 314 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S+I IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + + ++++P P G Sbjct: 189 VI-GTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 AW IVSE+ T+G+ +I + +F V +LI+ Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288 >gi|218531936|ref|YP_002422752.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|218524239|gb|ACK84824.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 353 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S++ +P+GI G +P I+ +P + + PA F L+V+ + Y P + + ++ Sbjct: 171 ISSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 229 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 F Q ++ N E A + R R +I+P + P G Sbjct: 230 GTFFQQVLVIANTTRRVDPL---LIEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 286 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 AW IV+E+ ++G+ +I + F V +L++ +A + Sbjct: 287 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 335 >gi|86751168|ref|YP_487664.1| binding-protein dependent transport system inner membrane protein [Rhodopseudomonas palustris HaA2] gi|86574196|gb|ABD08753.1| Binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris HaA2] Length = 256 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 19/172 (11%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ +++P + + +VYF E+A + +F + + MY+ + I Sbjct: 97 PMINFFRALPPIALIPLVIVYFGV--------DEVAKLVILFYASFFAGVIVMYEGVSQI 148 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 V+ + S ++ F + +P ++P ++ + +++ W +VASE+I Sbjct: 149 TPLYIRVAHTLGASEFEIFRKVIIPLTVPHILTALRVALGVAWATLVASELIAAQR---- 204 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR----PMIVWSNK 269 G+G+ I A LL ++Y + +G I L L+ R ++VW + Sbjct: 205 --GLGAMIQNA-STYFLLDVIYVGIICIGCIALIMDLILRRISARLLVWQER 253 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 11/186 (5%) Query: 389 RVVVLIIIASI-IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 R V+L +IA I + +PVG +G+ + P A P PLV+ Y+ ++ Sbjct: 65 RRVLLGVIAGIAVAVPVGFVLGWYRGARTFADPMINFFRALPPIALIPLVIV---YFGVD 121 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 L +L + + + + + G S + VA + + + +R +I+P P+ + Sbjct: 122 EVAKLVILF-YASFFAGVIVMYEGVSQITPLYIRVAHTLGASEFEIFRKVIIPLTVPHIL 180 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 T A G AW + SE+ + GLGA I ++ + +G++ + C L Sbjct: 181 TALRVALGVAWATLVASELIA------AQRGLGAMIQNASTYFLLDVIYVGIICIGCIAL 234 Query: 568 ALNRFL 573 ++ L Sbjct: 235 IMDLIL 240 >gi|117928095|ref|YP_872646.1| binding-protein-dependent transport systems inner membrane component [Acidothermus cellulolyticus 11B] gi|117648558|gb|ABK52660.1| binding-protein-dependent transport systems inner membrane component [Acidothermus cellulolyticus 11B] Length = 276 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+F V+V ++IA + +G+ +G + + + L A P PL+ Y Sbjct: 84 TLFAVIVGLLIALVGGSLLGLVVGRLSDVQRVLGMYVSGLYAMPIIALVPLITVWFGYSA 143 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++++ I+++V GA A P EV+ + WR W ++LP PY Sbjct: 144 TT----RLVVIVIEAGLPIVYSVAEGARAVPVMHIEVSRLYRAPWWRVWGGVVLPAAVPY 199 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 + G A G A ++ +E + H GLG Y+ SF E Sbjct: 200 VLAGVDLAIGRALIGAVAAEFIAAVH------GLGYYVLSHVN--SFKE 240 >gi|257461050|ref|ZP_05626148.1| abcb protein [Campylobacter gracilis RM3268] gi|257441424|gb|EEV16569.1| abcb protein [Campylobacter gracilis RM3268] Length = 265 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 7/115 (6%) Query: 150 MTF-SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 MTF S Q++ ++ + E+ S++ S ++K YL P + L+ + +++S G +V Sbjct: 148 MTFASAAQAMASVSAEYTELFDSYKSSFFKKLRYLYAPHLIERLLPAIYVAVSNGAKVLV 207 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 +E++ D GIG+ IA A D + ++ + + L+D L+ +P+ Sbjct: 208 MAELLGAND------GIGAKIAEARVNIDTVEVMAYVCLAIAFTALFDYLVTKPL 256 >gi|324326754|gb|ADY22014.1| glycine betaine/L-proline ABC transporter, permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 278 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 85/175 (48%), Gaps = 25/175 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQV 147 L +++ R L P LD MQ++P +L + +F + + PG + + IFA+ + Sbjct: 115 LTSQNERFSKFLKPTLDFMQTMPAFVYLIPAITFFGVGVVPGIIA----SVIFAMPPT-- 168 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGG 203 + F+ + +P DL E + +F + QK + + +P + M G+ ++M+S+S Sbjct: 169 --IRFTDL-GIRQVPEDLIEAANAFGSTASQKLFKVQLPLATGTIMAGVNQSIMLSLS-- 223 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +VV +++ PG+G + ++ + ++ A L ++ + + D++ Sbjct: 224 ---------MVVTASLVGAPGLGVDVYRSVTQVNIGMGFEAGLAIVVIAIILDRI 269 >gi|325277750|ref|ZP_08143314.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] gi|324097124|gb|EGB95406.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] Length = 224 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%) Query: 89 LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+ +RRL L+P+LD+MQ++P +L ++ F GKV A+FA Sbjct: 62 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 110 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 + + L I L + + S WQ+ + +P ++P GL ++MM++S Sbjct: 111 LPPLVRLTQLGLSQIDPSLLKAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 169 Query: 203 GWFFVVASEMI 213 VV + MI Sbjct: 170 ---MVVVASMI 177 >gi|317057977|gb|ADU90694.1| putative integral membrane subunit [Collimonas sp. MPS11E8] Length = 404 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 9/134 (6%) Query: 66 SRTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGF----LT 117 + LR L ++ S+L V + L+ +S+RL +L P+L+++Q+IP + + Sbjct: 196 DQALLRHLQLVLFSVLPAVVIGSSLGVLSFRSQRLSRLLFPLLNVIQTIPSIALFGLLIG 255 Query: 118 FTVVYFMNLYPGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + L + G +A A+ A+ + MT S L +P + E +R +S Sbjct: 256 PLTLLGLLLPRTGISGVGMAPALLALMLYSLLPMTRSAVAGLEQVPASVREAARGIGMSA 315 Query: 177 WQKFWYLGVPFSMP 190 WQ F+ + +P ++P Sbjct: 316 WQIFFRVELPLALP 329 >gi|170737497|ref|YP_001778757.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169819685|gb|ACA94267.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 255 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%) Query: 69 TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121 TL L + +S L + A A A +R G +P+ +DI Q+ P + L V Sbjct: 62 TLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPA 121 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 L P +I L + IF S + L ++PRD+ + +R +SGWQ+ Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172 Query: 182 YLGVPFSMPGLVWNMMMSM 200 + +P + P +V + +++ Sbjct: 173 SVELPLAFPVIVNGIRLAV 191 >gi|299770706|ref|YP_003732732.1| Taurine transport system permease protein tauC [Acinetobacter sp. DR1] gi|298700794|gb|ADI91359.1| Taurine transport system permease protein tauC [Acinetobacter sp. DR1] Length = 314 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S+I IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + + ++++P P G Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 AW IVSE+ T+G+ +I + +F V +LI+ Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288 >gi|227513671|ref|ZP_03943720.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus buchneri ATCC 11577] gi|227083187|gb|EEI18499.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus buchneri ATCC 11577] Length = 275 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%) Query: 75 AMVISLLF---TFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLY 127 A VIS F T VY T +R +L P+ +++ IP + GF+ +VV + N++ Sbjct: 64 AAVISTPFAIGTAVYMT-EISPKRGAKILQPVTELLVGIPSVVYGFIGLSVVVPFVRNVF 122 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G G L+ F +F + + SL ++P + S + + WQ W + + Sbjct: 123 GGSGFGI-LSGTFVLFVMILPTIVSMTVDSLKSVPTYYRQASLALGATKWQTIWKVVLRA 181 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + PG++ ++ M+ + +A +M++ +++P Sbjct: 182 ATPGILTAVVFGMARAFGEALAVQMVIGNASLMP 215 >gi|83648076|ref|YP_436511.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83636119|gb|ABC32086.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Hahella chejuensis KCTC 2396] Length = 273 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 8/116 (6%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PIL + IP L L + F++L G EL + IF MT M S+ + Sbjct: 117 PILTFIAMIPPLALLP---ILFISLGIG-----ELGKVALIFIGVFPIMTRDMALSVRSF 168 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 PR+ +++ S + + +P MP L+ + +S+ W F++ASE I + Sbjct: 169 PREQVVKAKTLGASDLAVVYKILLPQMMPRLITALRLSIGSAWLFLIASEAIAATE 224 >gi|293392812|ref|ZP_06637130.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291424671|gb|EFE97882.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 284 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 16/129 (12%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 LAA+S R+ V++P++D+MQ++P +L ++ F GKV I+A T + Sbjct: 116 LAARSDRVRAVMMPLMDVMQTMPSFVYLIPVLMLF---GLGKVPAILATVIYA--TPPLI 170 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 +T + + +++ E +F + WQK + + +P ++P G+ MMS+S Sbjct: 171 RLT---DLGIRQVDKEVMESVTAFGANRWQKLFGVQLPLALPSIMAGINQTTMMSLS--- 224 Query: 205 FFVVASEMI 213 VV + MI Sbjct: 225 -MVVVASMI 232 >gi|259418394|ref|ZP_05742312.1| binding-protein-dependent transport systems inner membrane component [Silicibacter sp. TrichCH4B] gi|259345789|gb|EEW57633.1| binding-protein-dependent transport systems inner membrane component [Silicibacter sp. TrichCH4B] Length = 269 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 18/156 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 LVP++ + IP + L V++F G G++ A I F FT V + Y ++ Sbjct: 112 LVPVMAAIFPIPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYGAV 162 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS + +P +MPG++ + +S++ +VA+EM+ G Sbjct: 163 DNVDRSLIRMGQSFGLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAQ 220 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGVI 252 GIG+YI A DL + +L++LGV+ Sbjct: 221 Y----GIGAYILEAGSLYDLERLFAGVVILSLLGVL 252 >gi|15893404|ref|NP_346753.1| sulfate ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15022933|gb|AAK78093.1|AE007523_8 ABC-type probable sulfate transporter, permease protein [Clostridium acetobutylicum ATCC 824] gi|325507516|gb|ADZ19152.1| ABC-type probable sulfate transporter, permease protein [Clostridium acetobutylicum EA 2018] Length = 265 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/193 (17%), Positives = 86/193 (44%), Gaps = 14/193 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ +I+L A + K + + L P++ +Q++P + ++ F ++++ Sbjct: 73 RLVIGYIIALFIGIALALVCIKYKYVDENLTPLMLGLQTLPSVCWIPFAILWYGI----- 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 E + IF ++++ S + N+ + +R+ G ++ + +P ++P Sbjct: 128 ---DERSIIFVTVVGSLFSIAISTISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALP 184 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ M S W ++A EM+ G+G + + D+ ++ M+ ++ Sbjct: 185 EIISGMRQGWSFAWRALMAGEMLS------ATKGLGQVLTAGRELGDISQVMAVMIIIIA 238 Query: 251 VIFLYDQLLFRPM 263 ++D+LLF + Sbjct: 239 FGLIFDKLLFEKV 251 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 13/231 (5%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 F + GV + S G + N Y +D I G ++ R+V+ IIA I I + + Sbjct: 32 FVDILGVWKAYTFPSPGEVYNALAYLVKDNTLFIATGA-SLTRLVIGYIIALFIGIALAL 90 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 ++ + P L P+ + P + +Y ++ + + + G+ + I Sbjct: 91 VCIKYKYVDENLTPLMLGLQTLPSVCWIPF---AILWYGIDER-SIIFVTVVGSLFSIAI 146 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 + I+G + + A + G + +++P P ++G AW A + E+ Sbjct: 147 STISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALPEIISGMRQGWSFAWRALMAGEM 206 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 S T GLG + E G +V+ ++I+ F L ++ L+ + Sbjct: 207 LS------ATKGLGQVLTAGRELGDISQVMAVMIIIIAFGLIFDKLLFEKV 251 >gi|317053575|ref|YP_004118709.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] gi|316952680|gb|ADU72153.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 288 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 9/122 (7%) Query: 93 SRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 S R+G L+ L M +P + L ++++F + A L +F I S +W M Sbjct: 115 STRIGRDLLSTLTAMFNPLPAIALLPLSLLWF------GLGNASL--VFVIVHSVIWPMA 166 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L+ R++ L GW+ ++ +P ++P L+ + + + W ++A+E Sbjct: 167 LNTWSGFMGVSDTLKMAGRNYGLKGWRYVAWILIPAALPALLSGLKIGWAFAWRTLIAAE 226 Query: 212 MI 213 ++ Sbjct: 227 LV 228 >gi|237718414|ref|ZP_04548895.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293371417|ref|ZP_06617848.1| phosphate ABC transporter, permease protein PstC [Bacteroides ovatus SD CMC 3f] gi|299149069|ref|ZP_07042131.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp. 3_1_23] gi|229452347|gb|EEO58138.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292633614|gb|EFF52172.1| phosphate ABC transporter, permease protein PstC [Bacteroides ovatus SD CMC 3f] gi|298513830|gb|EFI37717.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp. 3_1_23] Length = 398 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 20/191 (10%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150 L PI++++ IP + GF V+ NL G+ + G+ + AI A+ T + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFNLPVGESGLAGSIVLAIMALPT--IITV 269 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A Sbjct: 270 T---EDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326 Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 M+ VI PL I + IA + E Y L +LGV+ + L+ + Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSV 386 Query: 265 VWSNKFRLERT 275 + + L+R+ Sbjct: 387 EYISSKGLKRS 397 >gi|168702980|ref|ZP_02735257.1| glycine betaine/L-proline ABC transporter, permease and substrate-binding protein [Gemmata obscuriglobus UQM 2246] Length = 503 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 3/126 (2%) Query: 66 SRTTLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 +R L++ L +++ ++L LAA+ LG V + ++Q++P L L F ++ M Sbjct: 307 TREHLKLVLPSLLAAVLVAVPLGVLAARRPALGRVALGATGVLQTVPSLALLLF-MIPVM 365 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + G AI A+F + + + + L +IP L E + + LS W W + Sbjct: 366 KWLVDEGTGP-APAIAALFLYSLLPIVRNAHAGLTSIPAPLRESAAALGLSPWAILWRIE 424 Query: 185 VPFSMP 190 +P + P Sbjct: 425 LPLAAP 430 >gi|297155659|gb|ADI05371.1| putative ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 269 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 18/148 (12%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+V ++I ++ + + + G + Q+L P PL + Sbjct: 74 VSVQRVLVGLLIGAVAGVSLALVSGLSRLGEDLVDATVQMLRTIPWVGMIPLFI------ 127 Query: 445 HLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 +WL + L+ G +++ NV AG E +S + W R++ Sbjct: 128 -----IWLGIGEAPKIALISLGVTFHLYLNVYAGIRGVDAQLIEAGTSLGLGRWGLIRHV 182 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSE 525 +LPG P +TG + AW A + E Sbjct: 183 VLPGALPGAMTGLRYSLATAWLALVFGE 210 >gi|229593224|ref|YP_002875343.1| putative aliphatic sulfonates ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229365090|emb|CAY53295.1| putative aliphatic sulfonates ABC transport system, permease protein [Pseudomonas fluorescens SBW25] Length = 262 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 83/175 (47%), Gaps = 19/175 (10%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 99 VQMIRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIY--------LNTYHGIRNVDP 150 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E+SRS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 151 ALVEMSRSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 204 Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLGVIF-LYDQLLFRPMIVWSNKFRLER 274 GIG Y+A+ +E D++ + M +LG + L + L R + W +++ + Sbjct: 205 GIG-YLAMNAREFLQTDVVVLAIVMYAILGKLADLAARGLERVWLRWHPAYQVNK 258 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E++ S+ ++G+ +R +ILPG P + G A Sbjct: 128 LVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGFSLFRQVILPGALPSILVGVRFAL 187 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573 G W IV+E S ++G+G Y+A + + +VV+ ++M + L Sbjct: 188 GFMWLTLIVAETIS------ASSGIG-YLAMNAREFLQTDVVVLAIVMYAILGKLADLAA 240 Query: 574 ---------WHPLY 578 WHP Y Sbjct: 241 RGLERVWLRWHPAY 254 >gi|327480609|gb|AEA83919.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 292 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 15/212 (7%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH----FTYQDVLY 378 IR L + +S ++W G+A + S G ++ +T + +L Sbjct: 38 IRGELSRRSAWLLTGAGLSLPFVVWWLWTALGLADPMFMPSPGAVLERIGRWWTSEGLLG 97 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLV 437 I I+++RV+ +++I +P+G++IG +RP + + ++P + PA F PLV Sbjct: 98 DI---GISVWRVMAGFGASALIALPLGLYIGTYRP-VQAFLEPLTDFIRYMPAVAFIPLV 153 Query: 438 VSCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + V + +L+IF GT + ++ V P E A + + Sbjct: 154 MLWVGIDEGS-----KVLIIFIGTFFQMVLMVAEDVRRVPMAQIEAAQTMGANRSEIVKL 208 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 +ILP P + CG AW +V+E+ + Sbjct: 209 VILPSAKPALLDTLRITCGWAWTYLVVAELVA 240 >gi|323138299|ref|ZP_08073370.1| binding-protein-dependent transport systems inner membrane component [Methylocystis sp. ATCC 49242] gi|322396382|gb|EFX98912.1| binding-protein-dependent transport systems inner membrane component [Methylocystis sp. ATCC 49242] Length = 268 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A+VI+ + A L A+S+ L L+P ++Q PI+ +VY + ++ Sbjct: 73 LKALVIATVCGVALALLLAQSKWLERALLPFAIVLQVTPIIAIAPLLLVY-LQPRTAVLV 131 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A L A F I + N + L ++ L ++ +R S WQK YL +P ++P Sbjct: 132 CAFLVAFFPILS----NTSL----GLASVDHGLRDLFDLYRASPWQKLVYLRLPAALP 181 >gi|283781062|ref|YP_003371817.1| Substrate-binding region of ABC-type glycine betaine transport system [Pirellula staleyi DSM 6068] gi|283439515|gb|ADB17957.1| Substrate-binding region of ABC-type glycine betaine transport system [Pirellula staleyi DSM 6068] Length = 516 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 12/126 (9%) Query: 67 RTTLRMLSAMVISLLFTFVYA-TLAAKSRR---LGMVLVPILDIMQSIPILGFLTFTVVY 122 RTTL L + ISL V A L S R LG V++ + I+Q++P L L F + Sbjct: 317 RTTLEHLRLVAISLFAAIVIAIPLGIASFRYPKLGYVILGAVGIIQTLPSLAVLVFMI-- 374 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 P +GA L AI A+F + + S Y L +IP +L E + L + W Sbjct: 375 -----PLLGLGA-LPAIAALFLYSLLPIVRSTYTGLRDIPANLRESATVLGLDQRAQLWQ 428 Query: 183 LGVPFS 188 + +P + Sbjct: 429 VELPLA 434 >gi|260173871|ref|ZP_05760283.1| putative ABC transporter permease protein [Bacteroides sp. D2] gi|315922134|ref|ZP_07918374.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696009|gb|EFS32844.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 398 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 20/191 (10%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAELAAIFAIFTSQVWNM 150 L PI++++ IP + GF V+ NL G+ + G+ + AI A+ T + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFNLPVGESGLAGSIVLAIMALPT--IITV 269 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 T ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A Sbjct: 270 T---EDAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAV 326 Query: 211 EMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 M+ VI PL I + IA + E Y L +LGV+ + L+ + Sbjct: 327 LMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSV 386 Query: 265 VWSNKFRLERT 275 + + L+R+ Sbjct: 387 EYISSKGLKRS 397 >gi|148989520|ref|ZP_01820879.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP6-BS73] gi|147925063|gb|EDK76144.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP6-BS73] Length = 305 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ VV + +++ G G L+ I +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQVVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SFAMGATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|33594538|ref|NP_882182.1| ABC transport system permease protein [Bordetella pertussis Tohama I] gi|33564614|emb|CAE43932.1| ABC transport system permease protein [Bordetella pertussis Tohama I] gi|332383949|gb|AEE68796.1| ABC transport system permease protein [Bordetella pertussis CS] Length = 256 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 10/182 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+V A+ + IP+GI++G + P L P+ + PL + ++ + Sbjct: 70 RVMVGFAAATALAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSWIPL---SLLWFGITE 126 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 S++ + GT L VI AS+ +G + R +ILP P + Sbjct: 127 TQKYSIVFM-GTFAPALLYVIEATRNIDPLLIRAASNLGASGPQVMRSVILPASLPQIFS 185 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G G +W I +E+ + GLG I E VVLG+ ++ VL Sbjct: 186 GFKVILGLSWTCVISAELVAAKE------GLGFLIMNGKEFFQTDTVVLGMALISVTVLV 239 Query: 569 LN 570 + Sbjct: 240 TD 241 >gi|332971534|gb|EGK10484.1| ABC superfamily ATP binding cassette transporter, membrane protein [Kingella kingae ATCC 23330] Length = 266 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V ++ A +I +P+G +G + + P Q L + P+VV Sbjct: 79 SLQRVGVGLLAALMIGVPIGFALGLSRKVEQVVSPSFQFLRMISPLSWMPVVVMLFGI-- 136 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L+ F W I+ N ++G + E+ S T I+LP + Sbjct: 137 --GDAPIYFLLAFAAVWSIILNTVSGVKNINPQWLELGRSLSATKSEMLFKIMLPAVVGD 194 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G A G W + E+ GLG +I ++ ++ ++ E++ ++++ Sbjct: 195 ILNGLRLAIGIVWVVLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAIVLIGVI 248 Query: 566 VLALN 570 AL+ Sbjct: 249 GWALD 253 >gi|294495009|ref|YP_003541502.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Methanohalophilus mahii DSM 5219] gi|292666008|gb|ADE35857.1| binding-protein-dependent transport systems inner membrane component [Methanohalophilus mahii DSM 5219] Length = 259 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/114 (22%), Positives = 60/114 (52%), Gaps = 13/114 (11%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM---TFSMYQSL 158 P+++I++ IP L ++ F +V+F ++A F +F V+ + T + ++S+ Sbjct: 97 PLIEIVRPIPPLAWIPFAIVWFGL--------THISAGFVVFVGAVFPIIINTLTGFKSV 148 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + +V + + + Y+ +P+S+P + + ++M GW +VA+EM Sbjct: 149 SKVYVEAGKVLGCMKSTSLIR--YIALPYSLPSIAAGIRIAMGVGWMCLVAAEM 200 >gi|209518161|ref|ZP_03266989.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209501368|gb|EEA01396.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 289 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 17/68 (25%), Positives = 33/68 (48%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T S Q P L+E +R F WQ+ Y+ +P ++P L + ++ + W +V Sbjct: 169 VTLSTMQGFRQTPAALDEAARVFGYGRWQRIAYVVLPAAVPTLATGVRLAFTKAWLALVV 228 Query: 210 SEMIVVGD 217 E++ + Sbjct: 229 VELVASSE 236 >gi|167033367|ref|YP_001668598.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166859855|gb|ABY98262.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 282 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%) Query: 89 LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+ +RRL L+P+LD+MQ++P +L ++ F GKV A+FA Sbjct: 120 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 168 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 + + L I L + + S WQ+ + +P ++P GL ++MM++S Sbjct: 169 LPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 227 Query: 203 GWFFVVASEMI 213 VV + MI Sbjct: 228 ---MVVVASMI 235 >gi|307945113|ref|ZP_07660449.1| taurine ABC transporter, permease protein [Roseibium sp. TrichSKD4] gi|307770986|gb|EFO30211.1| taurine ABC transporter, permease protein [Roseibium sp. TrichSKD4] Length = 420 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 15/160 (9%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F GK I +F + +W MT + + + Sbjct: 263 PIVEFMRPVPPLALIPLVIIWFGIWETGK--------IALLFLAALWIMTIAARAGVSGV 314 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S Q W++ VP S+P + ++M W VVA+E++ Sbjct: 315 NITKVHAAYSLGASKTQILWHIIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA------ 368 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G G I A K Q L I+ + ++G++ +L R Sbjct: 369 QKGAGMMIIAASKFQ-LTDIVLMGIILIGIVGYSIDILMR 407 >gi|296126609|ref|YP_003633861.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] gi|296018425|gb|ADG71662.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] Length = 266 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 10/147 (6%) Query: 68 TTLRMLSAMVISLLFTFVYAT-LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + LR++ I+ +F F++ L K R I++ M+++P + + +++F Sbjct: 72 SLLRVIIGFSIAFVFAFIFGMILGIKPERFEY-FRNIIEFMRNVPPISLIAILILWFGIG 130 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 K+I LA+ F IF ++ QS+ + + L EV S + + F+ + +P Sbjct: 131 EKSKIIIIILASFFPIFI--------NIRQSIGTVDKKLIEVGYSLGFTKLKIFFKIMLP 182 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++P ++ M + + + ++ +EMI Sbjct: 183 SALPSILAGMKIGLGYSFRAIIGAEMI 209 >gi|222082005|ref|YP_002541370.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726684|gb|ACM29773.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 258 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 29/237 (12%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 S ++D F+F + I Q +I +H Y+ V IT+ V+ +I + + Sbjct: 27 SGVIDRFFFPA----PLDIVKQVTTWISDHGFYKHV-------GITLGETVLGYLIGTGL 75 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 + G+W+G P ++ + PF + + A P V P+ V L LW + + Sbjct: 76 GVAAGVWLGLSPFVARVLDPFIKAVNAIPRVVLAPIFV-----LWLGLGLWSKVALAVTL 130 Query: 461 QWYI-LFNVIAGASAFPNDFKEVASSFHITGWR---WWRYIILPGIFPYYVTGAITACGG 516 +++ FN + G + S+ I G + R++ P + ++ T+ G Sbjct: 131 VFFVTFFNAMQGVREVN---PVILSNTRILGAKRSDLLRHVYFPAAATWILSSLRTSVGF 187 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 A +I+ E + GLG IA S V G++I+ FVL ++ L Sbjct: 188 AVVGAIIGEYLG------ASAGLGYLIARSEGNFDAVGVFAGIIILAVFVLIIDLIL 238 >gi|150397263|ref|YP_001327730.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150028778|gb|ABR60895.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 303 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 132 IGAELAAIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 +G E+ AI AI VW+ T +Y +LC + + E +R + WQ Y+ +P Sbjct: 153 LGMEVGAIVAIVIVDVWHWTPVAFLMLYTALCAVDEEAVEAARCDGANEWQVIRYVKIPM 212 Query: 188 SMPGLV 193 MP ++ Sbjct: 213 LMPAIL 218 >gi|291616804|ref|YP_003519546.1| YehY [Pantoea ananatis LMG 20103] gi|291151834|gb|ADD76418.1| YehY [Pantoea ananatis LMG 20103] Length = 393 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 26/226 (11%) Query: 57 DVHSLPQYASRTT---------LRMLSAMVI-SLLFTFVYATLAAKSRRLGMVLVPILDI 106 D+ L +YA+R + L +L+A V+ +LL F + + + +L++ Sbjct: 166 DLSLLKEYANRQSVFDAALLRHLTLLAATVLPALLIAFPLGVVLYRRSGWQSSVFGVLNV 225 Query: 107 MQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSMYQSL 158 +Q++P + G L + +P G + G +A A+ A+ + + S+ L Sbjct: 226 VQTVPSVALFGLLIAPLAGLAKRFPWAGAWGISGIGMAPALIALVLYALLPLVRSVVTGL 285 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +P D+ E +R LSG Q+F+ + VP ++P VW +SG VV + + V Sbjct: 286 QQVPPDVRESARGMGLSGRQQFFAVEVPLALP--VW-----LSGIRVVVVQTLGMAVVAA 338 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 +I G G+ I + L +L ++ ++ + D LFR +I Sbjct: 339 LIGAGGFGAIIFQGLLSNALDLVLLGVIPVIAMAVTLDA-LFRMLI 383 >gi|288574240|ref|ZP_06392597.1| binding-protein-dependent transport systems inner membrane component [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569981|gb|EFC91538.1| binding-protein-dependent transport systems inner membrane component [Dethiosulfovibrio peptidovorans DSM 11002] Length = 257 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 24/182 (13%) Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 FRV+ I++ +P+G +G P P L P P+++ Sbjct: 64 FRVLTGFAISTATAVPLGFVLGLSPEARRLTDPTLDFLRHIPPLAVMPMLI--------- 114 Query: 448 PNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 LW + ++I T + +L N G + EV F ++ R + I+LP Sbjct: 115 --LWFGIGEPSKIVVIIMATFFPLLLNTRKGVDSCDKGLLEVGKVFGMSRKRRFMEILLP 172 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P + G +W + I +E+ + ++G+G I ++ + +VL V+ Sbjct: 173 SALPSVLVGMRVGLSYSWRSLIGAELIA------ASSGIGYAIHDAEQLSRSDVIVLWVI 226 Query: 561 IM 562 +M Sbjct: 227 LM 228 >gi|239917512|ref|YP_002957070.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Micrococcus luteus NCTC 2665] gi|281413998|ref|ZP_06245740.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Micrococcus luteus NCTC 2665] gi|239838719|gb|ACS30516.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Micrococcus luteus NCTC 2665] Length = 307 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 12/163 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+L + +P + ++ V++F ++ A F + T V + + + Sbjct: 140 PLLTALMVLPNVAWVPLAVLWFGL--------SDATAYFVMLTGAVPAVVAGLTTGTDQV 191 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L +R S + + +P ++P V + + W ++A+E+I VG P Sbjct: 192 PPQLRRAARVLGASRLETALLVVLPAALPAFVSGLRQGWAFAWRGLMAAEIIAVGG---P 248 Query: 222 LP-GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 + G+G+ + E DL +L A+L +L V L + +F P+ Sbjct: 249 MGVGLGTLLHQGRTESDLAVVLCAVLAILAVGVLVELTVFGPV 291 >gi|56709017|ref|YP_165062.1| glycine betaine/proline ABC transporter, permease protein, putative [Ruegeria pomeroyi DSS-3] gi|56680702|gb|AAV97367.1| glycine betaine/proline ABC transporter, permease protein, putative [Ruegeria pomeroyi DSS-3] Length = 524 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 12/115 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 KSRR + P+LD MQ++P +L + +F P V+ + A+ + M Sbjct: 360 GKSRRAYAIAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLIFAMPPVVRLTALGM 419 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +P +E + +F S WQ + + +P ++P G+ ++MS+S Sbjct: 420 R--------GVPETTKEAAIAFGCSPWQLLFNVELPLALPSIMTGINQTILMSLS 466 >gi|227114854|ref|ZP_03828510.1| putative taurine transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 257 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 28/166 (16%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R + +A I+ +P+G+ +G P I++ PF Q L P PL V Sbjct: 63 AVSVARALGAFSVAIILGVPLGLLMGLSPPIAAIFNPFVQFLRPLPKIALIPLAV----- 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494 +WL + ++++++F +V+ GA A + VA + + + + Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIF 169 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +++LP P T A G W + I +E+ + T+G+G Sbjct: 170 FHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMVA------ATSGIG 209 >gi|226364422|ref|YP_002782204.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226242911|dbj|BAH53259.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 295 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R ++ +A +I IP+GI I +RP +S + P +L A P+ + + Sbjct: 106 SLSRALIGFFVAVVIAIPLGIAIAWYRP-VSDFLNPILELFRNTAALALLPVFILILGIG 164 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L+I+ + IL N I+G + ASS ++ R ++ ++LP P Sbjct: 165 EESKIA----LVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVP 220 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG A + I +E+ GLG I S P + G++ + Sbjct: 221 TIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITASQFNFQIPNMYAGIVAISV 274 Query: 565 FVLALNRFL 573 L+LN L Sbjct: 275 LGLSLNAVL 283 >gi|22537151|ref|NP_688002.1| phosphate ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|25011080|ref|NP_735475.1| hypothetical protein gbs1026 [Streptococcus agalactiae NEM316] gi|76788397|ref|YP_329707.1| phosphate ABC transporter permease [Streptococcus agalactiae A909] gi|76797783|ref|ZP_00780049.1| phosphate ABC transporter, permease protein PstC [Streptococcus agalactiae 18RS21] gi|77405680|ref|ZP_00782767.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77411994|ref|ZP_00788323.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77413610|ref|ZP_00789796.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae 515] gi|22534014|gb|AAM99874.1|AE014237_8 phosphate ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|23095479|emb|CAD46685.1| unknown [Streptococcus agalactiae NEM316] gi|76563454|gb|ABA46038.1| phosphate ABC transporter, permease protein PstC [Streptococcus agalactiae A909] gi|76586859|gb|EAO63351.1| phosphate ABC transporter, permease protein PstC [Streptococcus agalactiae 18RS21] gi|77160319|gb|EAO71444.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77161950|gb|EAO72932.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77175676|gb|EAO78458.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 305 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P ++++ IP + GF+ ++ + +++ G G L+ + +F + +TF Sbjct: 118 ILQPAVELLVGIPSVVYGFIGLQIIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMT 176 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 SL +PR +E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 177 VDSLRAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVV 236 Query: 215 VGDTVIP 221 ++P Sbjct: 237 GNSAILP 243 >gi|328886649|emb|CCA59888.1| Predicted rhamnose oligosaccharide ABC transport system, permease component 2 [Streptomyces venezuelae ATCC 10712] Length = 352 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM---YQSLCNIPRDLEEVSRSFRLSGWQK 179 F+ L PG IG I+A+ VW M L +PR+L E ++ W++ Sbjct: 193 FLGLEPGGWIGDPDRIIYALVALTVWQFGAPMVIFLAGLKQVPRELYEAAQVDGAGPWRR 252 Query: 180 FWYLGVPFSMPGLVWNMMMS 199 FW + +P P L +N+++ Sbjct: 253 FWSITLPMISPVLFFNVLLE 272 >gi|298484081|ref|ZP_07002249.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp. D22] gi|295087666|emb|CBK69189.1| phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) [Bacteroides xylanisolvens XB1A] gi|298269762|gb|EFI11355.1| phosphate ABC transporter, permease protein PstC [Bacteroides sp. D22] Length = 398 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 10/186 (5%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L PI++++ IP + GF V+ L+ V + LA + + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTE 271 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A M+ Sbjct: 272 DAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTG 331 Query: 216 GDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 VI PL I + IA + E Y L +LGV+ + L+ + + + Sbjct: 332 NAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSVEYISS 391 Query: 270 FRLERT 275 L+R+ Sbjct: 392 KGLKRS 397 >gi|152981359|ref|YP_001354307.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] gi|151281436|gb|ABR89846.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] Length = 296 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 11/178 (6%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I +++ I G+++G H + +P Q L A P+ + PL+ + ++ ++ ++L+ Sbjct: 110 IGAVLAILFGLFVGLSKHAEAFFEPTFQALRAIPSLAWVPLL---LLWFGIDETPKITLI 166 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 I G + I +++G E+ + ++ R I+LP P TG Sbjct: 167 AI-GAFFPIYLGLVSGIRNVDRKLIELGEIYGLSAPALARRIVLPAALPSLFTGLRNGLS 225 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 AW + +E+ + T G+G Y+ + S P+VVL + + + L L Sbjct: 226 LAWMFLVAAELIA------ATKGIG-YLLTDGRETSRPDVVLAAIFLLAILGKLTDGL 276 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 9/171 (5%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P +IV + L+ L + S + R+ S I + ++ S+ P Sbjct: 78 PSEIVQTLSALLE-QGLLVHISASVARVFSGYAIGAVLAILFGLFVGLSKHAEAFFEPTF 136 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 +++IP L ++ +++F K+ + A F I+ + + N+ R Sbjct: 137 QALRAIPSLAWVPLLLLWFGIDETPKITLIAIGAFFPIY--------LGLVSGIRNVDRK 188 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 L E+ + LS + +P ++P L + +S W F+VA+E+I Sbjct: 189 LIELGEIYGLSAPALARRIVLPAALPSLFTGLRNGLSLAWMFLVAAELIAA 239 >gi|148545510|ref|YP_001265612.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|148509568|gb|ABQ76428.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|313496603|gb|ADR57969.1| SsuC [Pseudomonas putida BIRD-1] Length = 265 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ R G Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVARKEG 264 >gi|114319894|ref|YP_741577.1| binding-protein-dependent transport systems inner membrane component [Alkalilimnicola ehrlichii MLHE-1] gi|114226288|gb|ABI56087.1| binding-protein-dependent transport systems inner membrane component [Alkalilimnicola ehrlichii MLHE-1] Length = 282 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 32/158 (20%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 ++ L+ ++ R V+ P+LD MQ++P +L V +F L + A+F Sbjct: 117 IWGGLSGRAHR---VMTPVLDFMQTMPAFVYLIPAVPFF-----------GLGPVAAMFA 162 Query: 145 SQVWNMTFSMYQSLCNI---PRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMM 197 + +++M ++ + I P +L E + +F + QK + + +P ++P G+ +M Sbjct: 163 TVIFSMPPAIRLTTLGIRQVPAELVEAADAFGATRRQKLFKVQLPLAVPTIMAGINQTIM 222 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 +++S VV + MI G G+GS + AI+ Sbjct: 223 LALS----MVVIAAMIGAG-------GLGSEVWRAIQR 249 >gi|332306215|ref|YP_004434066.1| binding-protein-dependent transport systems inner membrane component [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173544|gb|AEE22798.1| binding-protein-dependent transport systems inner membrane component [Glaciecola agarilytica 4H-3-7+YE-5] Length = 283 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ + VIS+L + L R + L I ++P L + ++F Sbjct: 91 TLKRVAVSFVISMLLGVLIGVLMGTYTRFNKLTDTALIIALNVPALVTILLCYIWF---- 146 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V E AAI A+ ++V + + + + DL V++ +RLS W+ F + +P Sbjct: 147 -GLV---ESAAIAAVVLNKVPTVVVMIREGARVVDSDLLAVAKVYRLSPWRTFLKVFLPQ 202 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 P ++ + +S W V+ E++ D G+G + + D+ IL Sbjct: 203 LYPFIMASARSGLSLIWKIVLVVELLGRSD------GVGFALNTQFQYFDITGILAYTCA 256 Query: 248 MLGVIFLYDQLLFRPM 263 + +I + ++FRP+ Sbjct: 257 FISIILCVEAVVFRPI 272 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 42/201 (20%), Positives = 90/201 (44%), Gaps = 31/201 (15%) Query: 357 IGIAWQSIGYIVN----------------HFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 +GI WQ++ ++V H T ++L +W +T+ RV V +I+ ++ Sbjct: 49 VGIIWQAVAWLVASPDFPSCIAVLSSIHFHITQGEMLLNLW---VTLKRVAVSFVISMLL 105 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLA-AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +G+ +G + K+ A ++A PA V L C ++ L + ++ +++ Sbjct: 106 GVLIGVLMGTYTRFN-KLTDTALIIALNVPALVTILL---CYIWFGLVESAAIAAVVLNK 161 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ + GA +D VA + ++ WR + + LP ++P+ + A + W Sbjct: 162 VPTVVVM-IREGARVVDSDLLAVAKVYRLSPWRTFLKVFLPQLYPFIMASARSGLSLIWK 220 Query: 520 ASIVSEVASWGHIHLRTTGLG 540 +V E+ R+ G+G Sbjct: 221 IVLVVELLG------RSDGVG 235 >gi|330897252|gb|EGH28671.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 285 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R LS + I + V A + SRR +VL + ++++IP L + +++F Sbjct: 94 RALSGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQMLRTIPSLALVPLFILWFG------ 147 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E + I + + +++ + NI L E + + LS + W++ +P S+P Sbjct: 148 -IG-EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + S+ W +V E I Sbjct: 206 AFFVGLRYSLGISWLALVFVEQI 228 >gi|325067514|ref|ZP_08126187.1| glycine betaine ABC transporter, permease protein [Actinomyces oris K20] Length = 292 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 61/120 (50%), Gaps = 16/120 (13%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIG 133 A + +L+F AA+++ + +++ P+LD+MQ++P +L +V++F + + PG Sbjct: 104 ATLTALVFAVPLGIWAARNKYVSVLIRPVLDLMQTMPAFVYLIPSVLFFSIGVVPG---- 159 Query: 134 AELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +F + ++ M + + + + ++ E RSF + WQ + +P ++P Sbjct: 160 --------MFATLIFAMPPGVRMTELGIKQVDKETVEAGRSFGATDWQILRGIQLPLAVP 211 >gi|254438377|ref|ZP_05051871.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198253823|gb|EDY78137.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 345 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/145 (19%), Positives = 74/145 (51%), Gaps = 14/145 (9%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S R+ +++PILD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 178 SRSDRVQRIMIPILDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAIILYAIVPVVRLTDL 236 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + + +D+ E + +F +S QK + + +P ++P + M+G ++ S Sbjct: 237 GIRL------VDKDVIEAADAFGMSKRQKLFNVQIPLALPNI-------MAGVNQTIMMS 283 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE 235 +VV +++ PG+G + I+ Sbjct: 284 LAMVVIASLVSAPGLGVLVLRGIRS 308 >gi|126739819|ref|ZP_01755510.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. SK209-2-6] gi|126719051|gb|EBA15762.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. SK209-2-6] Length = 421 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVVV ++ SI+ IP+G +G P + + P PLV+ + Sbjct: 230 SLIRVVVGFVLGSIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ W + AG S A S + + R++I+P P Sbjct: 290 TGK----IFLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKAQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEV 526 TGA A G W + +E+ Sbjct: 346 IFTGARVAMGVCWGTVVAAEL 366 >gi|114769478|ref|ZP_01447104.1| amino acid ABC transporter, permease protein [alpha proteobacterium HTCC2255] gi|114550395|gb|EAU53276.1| amino acid ABC transporter, permease protein [alpha proteobacterium HTCC2255] Length = 343 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 42/190 (22%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + A +T +L +IS L +K RL ++P+LD++Q++P T VY Sbjct: 147 EPAMQTFAVILVCTIISALLGVPIGIAMSKYNRLQRAIIPVLDLLQTLP-------TFVY 199 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-----SLCN-----IPRDLEEVSRSF 172 + L +F I S+++ + +Y L + + +D+ E +F Sbjct: 200 LIPLI----------FLFPIGESRLYGIAIVLYAIVPVIRLTDLGVRLVDKDVVEAGNAF 249 Query: 173 RLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 +S QK + +P ++P GL +MMS++ M+V+ +++ PG+G Sbjct: 250 GMSPAQKLGKVELPLALPNIMAGLNQTIMMSLA----------MVVIA-SMVTAPGLGVL 298 Query: 229 IALAIKEQDL 238 + I+ +L Sbjct: 299 VLRGIRNLEL 308 >gi|316935677|ref|YP_004110659.1| binding-protein-dependent transporter inner membrane component [Rhodopseudomonas palustris DX-1] gi|315603391|gb|ADU45926.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris DX-1] Length = 277 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/112 (21%), Positives = 56/112 (50%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ ++ IP L ++ T+++F + A+ F +F V+ + + Y ++ + Sbjct: 118 PVIEALRPIPPLAWIPITILWFGL--------GDAASYFLVFLGAVFPVFIATYTAIRGL 169 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 R+ + WQ F + +P S+P ++ + +++ GW VV +E+I Sbjct: 170 DRNQMNAALCLGAKPWQLFTDVLIPASLPIILPGLRIALGVGWMCVVTAELI 221 >gi|118469424|ref|YP_888145.1| aliphatic sulfonates transport permease SsuC [Mycobacterium smegmatis str. MC2 155] gi|118170711|gb|ABK71607.1| putative aliphatic sulfonates transport permease protein SsuC [Mycobacterium smegmatis str. MC2 155] Length = 263 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 4/137 (2%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RVV+ +++ +I + +G +G + + + P Q++ A P PL + L P Sbjct: 77 RVVIGLLLGGVIGVALGTAVGLSRWLEATVDPPMQMIRALPHLGLIPLFIVWFGIGEL-P 135 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + LL+ G + + N + E A + W+ +R II+P P + Sbjct: 136 KV---LLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFSFWQRFRTIIVPSAAPQVLV 192 Query: 509 GAITACGGAWNASIVSE 525 G + AW IV+E Sbjct: 193 GFRQSLAIAWLTLIVAE 209 >gi|312958359|ref|ZP_07772880.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas fluorescens WH6] gi|311287423|gb|EFQ65983.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas fluorescens WH6] Length = 278 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 20/267 (7%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI------AWQS 363 + VK RT+ +R ++ + + + +L I+W G+ + A Sbjct: 8 ATAVKPAARTVIPVRRSLSTRWISVLT---LVVLLAIWWAVTATGLIEPLFLPPPSAVLQ 64 Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 G+++ Y D LG ++ R+ + + A + +PVGI IG + P + Sbjct: 65 KGWLLATTGYMDSTLWQHLGA-SLSRIGLGLGFAVLTAVPVGIAIGSNRIARGILDPLIE 123 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 P + PL+V L+ L L L IF I G A Sbjct: 124 FYRPIPPLAYLPLIVIWCGIGELSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAA 179 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 S + + R++ILP P +TG G W+ + +E+ + T+GLG + Sbjct: 180 QSLGASRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMV 233 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570 + + VVLG+L++ A+ Sbjct: 234 QSAAQFLVTDVVVLGILVIALIAFAME 260 >gi|294853720|ref|ZP_06794392.1| sulfonate/nitrate/taurine transport system permease [Brucella sp. NVSL 07-0026] gi|294819375|gb|EFG36375.1| sulfonate/nitrate/taurine transport system permease [Brucella sp. NVSL 07-0026] Length = 272 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252 G G+GSYI A DL + A+L+++G+I Sbjct: 221 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 255 >gi|256811246|ref|YP_003128615.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus fervens AG86] gi|256794446|gb|ACV25115.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus fervens AG86] Length = 256 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 9/189 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV+ ++AS++ IP+GI +G +++ ++L P + PL ++++ Sbjct: 62 ISIKRVLSGFLLASVVAIPLGILMGHYRVVNNFCDALIEVLRPIPPLAWVPL---SLAWF 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L + + ++ G + IL N I+G P E A + G +++P P Sbjct: 119 GLG-EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAKGKDILIKVVIPASSP 177 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG G AW + +E+ + GLG I + V+ ++I+ Sbjct: 178 SILTGLRVGAGIAWMCVVAAEM-----LPSSNAGLGYLIMYAYSLSRMDVVIACMIIIGL 232 Query: 565 FVLALNRFL 573 L L+R L Sbjct: 233 IGLVLDRGL 241 >gi|222082431|ref|YP_002541796.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter K84] gi|221727110|gb|ACM30199.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter K84] Length = 303 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ A + A+ M ++ +L I R L E +R +GWQ W + +P + PG Sbjct: 172 SDFAVVLAMVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGANGWQVLWNVVIPLAKPG-- 229 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 M+ G FVV M + G + IAL +K Q Sbjct: 230 ------MAIGSIFVVTLVMADFSTVQVMSGGQSASIALMMKNQ 266 >gi|170724130|ref|YP_001751818.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] gi|169762133|gb|ACA75449.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] Length = 265 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ R G Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVARKEG 264 >gi|114569621|ref|YP_756301.1| glycine betaine ABC transporter substrate-binding protein [Maricaulis maris MCS10] gi|114340083|gb|ABI65363.1| Substrate-binding region of ABC-type glycine betaine transport system [Maricaulis maris MCS10] Length = 525 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 17/202 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 LP + L L+A+++ L + LAA RL V++ ++Q+IP L L Sbjct: 11 ELPDLLAGHMLLSLAAILVGLSISLPLGILAASRPRLAAVVLNAASVIQTIPGLALLALM 70 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTS--QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 V G +IG A + + S + T Q L + R E +R ++ Sbjct: 71 VPLL-----GGMIGYAPAFLALMLYSILPILRNTIVGLQGLDPVVR---EAARGIGMTPR 122 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 ++ W + +P ++P +V + ++ W A+ VG + +G+YI ++ ++ Sbjct: 123 ERLWQVELPLALPVIVAGLRTAVV--WVVGAATLATPVGAS-----SLGNYIFAGLQTRN 175 Query: 238 LLAILYAMLTMLGVIFLYDQLL 259 L++L+ L G+ DQ++ Sbjct: 176 WLSVLFGCLFAAGLAIALDQII 197 >gi|291537099|emb|CBL10211.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Roseburia intestinalis M50/1] Length = 263 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 10/164 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++R+ + + A ++ +P+GI +G + I+P + + P F PL++ V Sbjct: 69 ISIYRITLGFVYAVLLGVPIGILVGTFKKAEAFIRPLCEFVRYMPVPAFVPLIMVWVG-- 126 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++++ I GT + ++ V A A P+D + + I++P + P Sbjct: 127 -IEESAKITVIFI-GTFFQLVLMVADDALAVPDDLINAGYTLGSNTPKTIFKILIPAMMP 184 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + G AW + +E+ + TGLG I +S Sbjct: 185 RLMETLRMMIGWAWTYLVSAELVA------ANTGLGYTILKSQR 222 >gi|289191693|ref|YP_003457634.1| phosphate ABC transporter, inner membrane subunit PstC [Methanocaldococcus sp. FS406-22] gi|288938143|gb|ADC68898.1| phosphate ABC transporter, inner membrane subunit PstC [Methanocaldococcus sp. FS406-22] Length = 282 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 16/176 (9%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-----FMNLYPGKVIGAELAAIFAIFTS 145 S ++ VL P+++I+ +IP + GF+ ++ +N+ PG + AA + Sbjct: 96 SEKVRNVLKPVVEILTAIPSVVYGFVGMVLLVPWIREILNVNPGY---SWFAASVILSIM 152 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + +T ++ N+P+ +++ S S + WQ Y+ +P S G++ + ++M Sbjct: 153 ILPTITSISEDAIRNVPQSIKKASFSLGATHWQTIKYVILPHSFRGILAGIFLAMGRAVG 212 Query: 206 FVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 +A M+ +I P+ + S+I L IKE + + +Y + G+I L+ Sbjct: 213 ETMAVLMVAGNCPLIPKSIFDPVRPLTSHIILNIKEASVGSPVYYAMFACGIILLF 268 >gi|240144644|ref|ZP_04743245.1| binding-protein-dependent transport system inner membrane component [Roseburia intestinalis L1-82] gi|257203361|gb|EEV01646.1| binding-protein-dependent transport system inner membrane component [Roseburia intestinalis L1-82] gi|291540333|emb|CBL13444.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Roseburia intestinalis XB6B4] Length = 260 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 10/164 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+++R+ + + A ++ +P+GI +G + I+P + + P F PL++ V Sbjct: 69 ISIYRITLGFVYAVLLGVPIGILVGTFKKAEAFIRPLCEFVRYMPVPAFVPLIMVWVG-- 126 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + ++++ I GT + ++ V A A P+D + + I++P + P Sbjct: 127 -IEESAKITVIFI-GTFFQLVLMVADDALAVPDDLINAGYTLGSNTPKTIFKILIPAMMP 184 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + G AW + +E+ + TGLG I +S Sbjct: 185 RLMETLRMMIGWAWTYLVSAELVA------ANTGLGYTILKSQR 222 >gi|144899731|emb|CAM76595.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 270 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 11/118 (9%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RRL + P L +++IP + ++ +++F KVI + F I+ + Sbjct: 104 RRL---IDPSLQALRNIPSIAWVPMFILWFGIFETSKVILIAVGVFFPIY--------LA 152 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + ++ + R L EV R FR S + + +P ++P V + + GW FVVA+E Sbjct: 153 LSGAILGVDRKLVEVGRIFRFSHQEMITRILLPATLPTYVIALRSGLGLGWMFVVAAE 210 >gi|121610569|ref|YP_998376.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121555209|gb|ABM59358.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 275 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 12/177 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV+ ++A+ + +P+GI +G I + +PF PA+ F PL++ Sbjct: 83 MTVWRVLAGFVLAAAVALPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIG 142 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+IF G+ + I V + D E A + +++PG Sbjct: 143 EAQ-----KILVIFIGSVFQITLMVAVTVGSARRDLVEAAYTLGAGHRGIVTRVLIPGAA 197 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P G AW IV+E+ ++G+G I +S + +++ G++ Sbjct: 198 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGII 248 >gi|269967305|ref|ZP_06181368.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269828083|gb|EEZ82354.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 299 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 25/172 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S + V+ P+LD+MQ++P +L V M L GK+ G I+AI ++ N Sbjct: 129 ARSNHIQSVVTPLLDVMQTMPAFVYLIPVV---MLLGIGKIPGLIAVVIYAIPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ + + +P +MP G+ +MM++S Sbjct: 186 LGIRL------VDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS---- 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 M+V+ ++I + G+G + +I Q L L ++ + L+D+ Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|304317033|ref|YP_003852178.1| ABC transporter inner membrane protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778535|gb|ADL69094.1| binding-protein-dependent transport systems inner membrane component [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 243 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/126 (20%), Positives = 56/126 (44%), Gaps = 7/126 (5%) Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 G+ + I+ V +G + + + A + G++ + +I+P P + G AW Sbjct: 120 GSIFSIILAVDSGIKNVNSIYLKAAKTMGAKGYKLYSNVIIPAALPNIIAGLKEGWSFAW 179 Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 I G + + TGLG +++ + + +VV +LI+ L +++F++ + Sbjct: 180 RGLIS------GEMLVSATGLGQILSKGKDASNISQVVAVMLIILSLGLVIDKFVFGRIE 233 Query: 579 LYGTRC 584 RC Sbjct: 234 -KSIRC 238 >gi|254303132|ref|ZP_04970490.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323324|gb|EDK88574.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 250 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 25/199 (12%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL----LAAFPANVFFPLVVS 439 +++ RV+ ++S+ I +GI++G IS KI+ F QL + P + PL++ Sbjct: 58 SLSLRRVLGGFFLSSVFGILLGIFMG----ISQKIKEFFQLTLTAIRQIPMIAWIPLIIL 113 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ ++++F + I+ N ++G + + EVA + ++ + + L Sbjct: 114 WAGIGEISK----IVVILFAATFPIVVNTMSGVDSTSETYLEVAKMYGLSKKETFFKVYL 169 Query: 500 PGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P P TG +W A + SE +AS I R A S K Sbjct: 170 PSALPNIFTGLRLGLSSSWMAVVASELIASSSGIGYRLND-----ARSLMKSD------- 217 Query: 559 VLIMCCFVLALNRFLWHPL 577 V+I+C V+ L L L Sbjct: 218 VVIVCMIVIGLIGLLMDKL 236 >gi|116751362|ref|YP_848049.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] gi|116700426|gb|ABK19614.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] Length = 200 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 55/116 (47%), Gaps = 8/116 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S+ ++ P+L ++ +PI+ ++ T+V+F L G + F I V+ + Sbjct: 93 SKTAMQLIDPVLGTVRQVPIMAWVPLTIVWF-GLGDGPTV-------FLIAMVGVFPILL 144 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + + +I D +R+ W F + VP +MP ++ M +++S GW V+ Sbjct: 145 NTVAGVQSISADYYNAARTMGAGPWSIFKDVMVPAAMPDILTGMRLAVSAGWMSVI 200 >gi|330939585|gb|EGH42900.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 285 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 19/204 (9%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R LS + I + V A + SRR +VL + ++++IP L + +++F Sbjct: 94 RALSGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQMLRTIPSLALVPLFILWFG------ 147 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E + I + + +++ + NI L E + + LS + W++ +P S+P Sbjct: 148 -IG-EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLP 205 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAMLT 247 + S+ W +V E I +T GIG Y+A ++ D++ I + + Sbjct: 206 AFFVGLRYSLGISWLALVFVEQI---NTT---AGIG-YLASDARDFMRTDVIVICLLIYS 258 Query: 248 MLG-VIFLYDQLLFRPMIVWSNKF 270 +LG VI + L R + W F Sbjct: 259 VLGLVIDAIIRTLERYALAWRPTF 282 >gi|297203214|ref|ZP_06920611.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] gi|197711296|gb|EDY55330.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] Length = 305 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 14/195 (7%) Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 +LL + A+ + + + PIL +QS+P + ++ V++ +G + Sbjct: 117 ALLIGTPLGLIVARVKFIRAAIGPILSGLQSLPSVAWVPPAVIW---------LGLNNSM 167 Query: 139 IFA-IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 ++A I V ++ + + +P R+ +G + W++ +P ++PG V + Sbjct: 168 MYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGIKGIWHVTLPAALPGYVAGLK 227 Query: 198 MSMSGGWFFVVASEMIVV-GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + W ++A+E+I D + G+G + D+ + A+L +L V D Sbjct: 228 QGWAFSWRSLMAAEIIAQFPDLGV---GLGQLLENGRTNSDMAMVFEAILLILFVGIAID 284 Query: 257 QLLFRPMIVWSNKFR 271 L+F P+ W + R Sbjct: 285 LLIFSPLERWVLRSR 299 >gi|330467532|ref|YP_004405275.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Verrucosispora maris AB-18-032] gi|328810503|gb|AEB44675.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Verrucosispora maris AB-18-032] Length = 276 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 12/165 (7%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I +PVG+ +G P + + P+ Q P P+ ++ L P + +IF Sbjct: 97 VIGVPVGLLMGCIPWLRLMLDPYIQFFRFVP-----PIAFVTLAIIWLGPGEASKVALIF 151 Query: 459 GTQWYIL-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 T +I+ N +AG A + A + + R ++LP P+ VTGA A G + Sbjct: 152 YTTVFIVALNTLAGVLAVDDLRLRAARALGASPLRTLVSVVLPSTVPHVVTGARLAMGNS 211 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 + + +E+ + +GLG+ I + V +G+L + Sbjct: 212 FLTIVSAEIVA------AQSGLGSLIWTARNYAKTEWVFVGILAL 250 >gi|262278636|ref|ZP_06056421.1| taurine transport system permease tauC [Acinetobacter calcoaceticus RUH2202] gi|262258987|gb|EEY77720.1| taurine transport system permease tauC [Acinetobacter calcoaceticus RUH2202] Length = 314 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S+I IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + + ++++P P G Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 AW IVSE+ T+G+ +I + +F V +LI+ Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288 >gi|269795034|ref|YP_003314489.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Sanguibacter keddieii DSM 10542] gi|269097219|gb|ACZ21655.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Sanguibacter keddieii DSM 10542] Length = 325 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 94/193 (48%), Gaps = 26/193 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+ +VI+++ A L +++R L L P I+Q+IPIL + ++F + +VI Sbjct: 136 LTGLVIAVVLGISQAILMSQARWLERSLYPYAVILQTIPILALVPLIGLWFGFGFTSRVI 195 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 + A+F + ++ ++ + QS DL ++++ R Q+ W L +P ++P + Sbjct: 196 VCVIIALFPMISNTLFGI-----QSAEPAAHDLFTLNKATRA---QRLWKLQMPAAVPSI 247 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVI--PLPGIGSYIAL---AIKEQDLLAILYAMLT 247 + +S G + A +VGD PGIGS + + ++ ++L LT Sbjct: 248 FAG--LKISAGLAVIGA----IVGDMFFRQGAPGIGSLLDVYRARVESENL-------LT 294 Query: 248 MLGVIFLYDQLLF 260 +G+ L+ L+F Sbjct: 295 AIGLASLFGVLVF 307 >gi|156934572|ref|YP_001438488.1| alkanesulfonate transporter permease subunit [Cronobacter sakazakii ATCC BAA-894] gi|156532826|gb|ABU77652.1| hypothetical protein ESA_02406 [Cronobacter sakazakii ATCC BAA-894] Length = 263 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G + E+A S+ ++G+ +R +ILPG P + G A Sbjct: 130 LVALGTLFPIYINTWHGIRNIDSGLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------- 566 G W IV+E S +G+G Y+A + + +VV+ +I+ + Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADLSA 242 Query: 567 LALNR--FLWHPLY 578 AL R WHP Y Sbjct: 243 RALERVWLRWHPAY 256 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDS 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D++ ILYA+L L L + L R + W ++L+ Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLA--DLSARALERVWLRWHPAYQLKEANA 263 >gi|90420892|ref|ZP_01228797.1| ABC-transporter permease component [Aurantimonas manganoxydans SI85-9A1] gi|90334867|gb|EAS48639.1| ABC-transporter permease component [Aurantimonas manganoxydans SI85-9A1] Length = 244 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 14/202 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T+ RV IA II +G+ +G P+ L PA LVV ++Y Sbjct: 49 AMTLMRVAAAFAIAMIIGSAIGVGLGMDARADRFFDPWLILFLNIPA-----LVVIALAY 103 Query: 444 --YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 + LN + + I ++ + GA + E+AS + WR R ++LP Sbjct: 104 IWFGLNEAAAVGAIAINKIP-NVVVTMREGARSLDRGLSEMASVYRFGRWRTLRDVVLPQ 162 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 + PY+ + + W ++V E+ R+ G+G I + ++ L Sbjct: 163 LQPYFAAASRSGIALIWKIALVVELLG------RSNGVGFQIHLYFQLFDVAAILAYTLA 216 Query: 562 MCCFVLALNRFLWHPLYLYGTR 583 +L + L PL + TR Sbjct: 217 FVAIMLLIEFLLVQPLEAHATR 238 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 30/137 (21%), Positives = 63/137 (45%), Gaps = 6/137 (4%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AA+ AI +++ N+ +M + ++ R L E++ +R W+ + +P P Sbjct: 110 EAAAVGAIAINKIPNVVVTMREGARSLDRGLSEMASVYRFGRWRTLRDVVLPQLQPYFAA 169 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 ++ W + E++ + G+G I L + D+ AIL L + ++ L Sbjct: 170 ASRSGIALIWKIALVVELLGRSN------GVGFQIHLYFQLFDVAAILAYTLAFVAIMLL 223 Query: 255 YDQLLFRPMIVWSNKFR 271 + LL +P+ + ++R Sbjct: 224 IEFLLVQPLEAHATRWR 240 >gi|29828100|ref|NP_822734.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29605202|dbj|BAC69269.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 268 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 34/71 (47%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++ G + + NV AG + E S ++ W R+++LPG P +TG + Sbjct: 139 IITLGVSFPLYLNVYAGIRGVDSQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSL 198 Query: 515 GGAWNASIVSE 525 G AW A + +E Sbjct: 199 GIAWLALVFAE 209 >gi|89895229|ref|YP_518716.1| hypothetical protein DSY2483 [Desulfitobacterium hafniense Y51] gi|89334677|dbj|BAE84272.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 252 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 24/168 (14%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FR+ V + I + +P+G++IG I P L P + P+ + Sbjct: 62 SLFRLGVGMAITIGLAVPLGLFIGLFSRAQKFITPTLAFLQQIPTIAWIPVFI------- 114 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LWL + LM++ + + N + G + KEVA +F + ++ Sbjct: 115 ----LWLGIGEAMKIALMVYAAFFPVFINTLFGIQSVDQKLKEVAQAFSLGYQARIIHVY 170 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 LP P++ G W A + +E+ + + GLG + E Sbjct: 171 LPSAAPHFFVGIRLGFSNCWRALVAAEIIA------SSKGLGYLLMEG 212 >gi|13476102|ref|NP_107672.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099] gi|14026862|dbj|BAB53458.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099] Length = 659 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 15/161 (9%) Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 +++ P LD+MQ+IP +L ++ F N + ++A+ A M + Sbjct: 182 LIVSPALDLMQTIPTFAYLIPMLLLFGN--------SPVSAMIATAIFATPPMVRATMLG 233 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P ++ E S + QK W + +P + P L+ + + V+ + MI G Sbjct: 234 LTRVPLEIGEFSDMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIASMIGAG- 292 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G + LA++ + + A L ++ + D+L Sbjct: 293 ------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 327 >gi|298250603|ref|ZP_06974407.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] gi|297548607|gb|EFH82474.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] Length = 288 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%) Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 K++G A I T + T+ M L +IP DLEE + + Q W + VP ++ Sbjct: 142 KLVGTYPAVIITDLTFALPFATWLMVSYLGSIPVDLEEAALVDGATRLQALWRVIVPLAL 201 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 PG+V ++ S GW V+ + ++ +T Sbjct: 202 PGMVVALVFSFLAGWNDVLFASVLTSPET 230 >gi|220922642|ref|YP_002497944.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219947249|gb|ACL57641.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 290 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 16/75 (21%), Positives = 39/75 (52%) Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF + S VW + + + ++P L R++ L+G W + +P ++P ++ + + Sbjct: 156 IFVLIHSVVWPLALNTFAGFQSVPETLRMAGRNYGLTGLAYVWQILIPAALPAILSGLKI 215 Query: 199 SMSGGWFFVVASEMI 213 + W ++A+E++ Sbjct: 216 GWAFAWRTLIAAELV 230 >gi|148547436|ref|YP_001267538.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|148511494|gb|ABQ78354.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] Length = 282 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%) Query: 89 LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+ +RRL L+P+LD+MQ++P +L ++ F GKV A+FA Sbjct: 120 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 168 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 + + L I L + + S WQ+ + +P ++P GL ++MM++S Sbjct: 169 LPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 227 Query: 203 GWFFVVASEMI 213 VV + MI Sbjct: 228 ---MVVVASMI 235 >gi|260549620|ref|ZP_05823838.1| taurine transport system permease tauC [Acinetobacter sp. RUH2624] gi|260407413|gb|EEX00888.1| taurine transport system permease tauC [Acinetobacter sp. RUH2624] Length = 314 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S+I IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + + ++++P P G Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 AW IVSE+ T+G+ +I + +F V +LI+ Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288 >gi|167041505|gb|ABZ06255.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_007I05] Length = 631 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 10/155 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV + + + I +P+GI++G P +L P + PLV++ Sbjct: 440 SFLRVFLGLSLGIIFGVPLGIFMGLNRFAKGFFDPLVELYRPVPPLAWAPLVITVFGI-- 497 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N+ L+ ++ + AGAS A S + W+ R +I P P Sbjct: 498 --DNVGKVFLLFMVALSIMIISARAGASGTQLSKIHAAHSLGASRWQILRNVIFPNSLPE 555 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +TG A G W + +E + TTG+G Sbjct: 556 ILTGIRVAVGMCWGTLVAAEFLAG------TTGIG 584 >gi|188583124|ref|YP_001926569.1| ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179346622|gb|ACB82034.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium populi BJ001] Length = 357 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 ++S++ +P+GI G +P I+ +P + + PA F L+V+ + Y P + + ++ Sbjct: 175 LSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 233 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 F Q ++ N E A + R R +I+P + P G Sbjct: 234 GTFFQQVLVIANTTRRVDPL---LVEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 290 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 AW IV+E+ ++G+ +I + F V +L++ +A + Sbjct: 291 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 339 >gi|145632604|ref|ZP_01788338.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 3655] gi|145634647|ref|ZP_01790356.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae PittAA] gi|145636376|ref|ZP_01792045.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae PittHH] gi|144986799|gb|EDJ93351.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae 3655] gi|145268192|gb|EDK08187.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae PittAA] gi|145270541|gb|EDK10475.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Haemophilus influenzae PittHH] Length = 245 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 22/179 (12%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R++ VL+PIL I Q+IP+ V++F K++ + L F + T + Sbjct: 83 RQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPV--------TAA 134 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Y L N P+ +++++F +S + + +P ++P + +++S VA Sbjct: 135 CYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVS------VAPIGA 188 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWS 267 VVG+ V G+G Y+ + + + +++A L +L I F D LL R +WS Sbjct: 189 VVGEWVGSSEGLG-YLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHR--FIWS 244 >gi|154245174|ref|YP_001416132.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154159259|gb|ABS66475.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 270 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 8/172 (4%) Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPH 413 V++G A + + + T Y++W + ++ R+ + I++ I + VG+ +G P Sbjct: 49 VSLGDAIIKVAFTADARTGD---YLLWTDTLASLERLFSALAISTAIALLVGVLVGMLPI 105 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + S + PF +++ P P++ + L ++L+ I G Y++ ++ Sbjct: 106 VRSFLAPFVAMVSMVPPLALLPILFIVMG---LGEASKIALITI-GITPYLIRDLAMRVE 161 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 P + A + + W+ ++LP I P + G + G A+ I +E Sbjct: 162 ELPREQMIKAQTLGASTWQMALRVVLPQILPRLMDGLRLSLGPAFLFLIAAE 213 >gi|237712826|ref|ZP_04543307.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408817|ref|ZP_06085362.1| phosphate ABC transporter, permease PstC [Bacteroides sp. 2_1_22] gi|294648189|ref|ZP_06725729.1| phosphate ABC transporter, permease protein PstC [Bacteroides ovatus SD CC 2a] gi|294810767|ref|ZP_06769415.1| phosphate ABC transporter, permease protein PstC [Bacteroides xylanisolvens SD CC 1b] gi|229447154|gb|EEO52945.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353028|gb|EEZ02123.1| phosphate ABC transporter, permease PstC [Bacteroides sp. 2_1_22] gi|292636464|gb|EFF54942.1| phosphate ABC transporter, permease protein PstC [Bacteroides ovatus SD CC 2a] gi|294442100|gb|EFG10919.1| phosphate ABC transporter, permease protein PstC [Bacteroides xylanisolvens SD CC 1b] Length = 398 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 10/186 (5%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L PI++++ IP + GF V+ L+ V + LA + + + Sbjct: 212 LKPIIELLSGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTE 271 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A M+ Sbjct: 272 DAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTG 331 Query: 216 GDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 VI PL I + IA + E Y L +LGV+ + L+ + + + Sbjct: 332 NAAVIPITILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSVEYISS 391 Query: 270 FRLERT 275 L+R+ Sbjct: 392 KGLKRS 397 >gi|55233214|gb|AAV48566.1| OpuAB [Halobacillus trueperi] Length = 281 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 21/154 (13%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A +IS++ + AKS+ +L P+LD MQ++P +L V +F G V G Sbjct: 103 ASLISVIIGVPFGIWMAKSKLAEKILTPVLDFMQTMPAFVYLIPAVAFF---SIGMVPGV 159 Query: 135 ELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----M 189 + IFA T + N+ + + +L E S +F +G QK + + +P + M Sbjct: 160 FASVIFATPPTVRFTNL------GIRQVSHELIEASDAFGTTGTQKLFKVQLPMAKKTIM 213 Query: 190 PGLVWNMMMSMSGGWFFVVASEMI---VVGDTVI 220 G+ +M+++S VV + MI +G TVI Sbjct: 214 AGINQTVMLALS----MVVIASMIGAKGLGQTVI 243 >gi|255320678|ref|ZP_05361855.1| taurine transport system permease protein TauC [Acinetobacter radioresistens SK82] gi|262380690|ref|ZP_06073843.1| nitrate ABC transporter, permease [Acinetobacter radioresistens SH164] gi|255302294|gb|EET81534.1| taurine transport system permease protein TauC [Acinetobacter radioresistens SK82] gi|262297638|gb|EEY85554.1| nitrate ABC transporter, permease [Acinetobacter radioresistens SH164] Length = 268 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q+L PA PLV+ ++ ++ + L L+ I G + I N G + E+ Sbjct: 112 QMLRNIPALALIPLVIL---WFGIDESAKLFLVAI-GVFFPIYINTYHGIRSVDPQLIEM 167 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ + + ++ IILPG P + G A G W IV+E S +G+G Sbjct: 168 GKSYGLNRRQLYQQIILPGAMPSILVGLRFALGLVWVLLIVAETIS------AQSGIGYM 221 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-----VLA--LNRFL--WHPLY 578 + E V++G+L+ +LA L R+L WHP Y Sbjct: 222 TMNAREFLQTDIVLVGILLYALLGKLADILAQGLERYLLRWHPGY 266 >gi|20808057|ref|NP_623228.1| ABC-type phosphate transport system, permease component [Thermoanaerobacter tengcongensis MB4] gi|254478769|ref|ZP_05092137.1| phosphate ABC transporter, permease protein PstC [Carboxydibrachium pacificum DSM 12653] gi|20516637|gb|AAM24832.1| ABC-type phosphate transport system, permease component [Thermoanaerobacter tengcongensis MB4] gi|214035281|gb|EEB75987.1| phosphate ABC transporter, permease protein PstC [Carboxydibrachium pacificum DSM 12653] Length = 297 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 4/133 (3%) Query: 93 SRRLGM-VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW 148 S+++G +L P ++I IP + G+L +V V F++ + G + + LA I + + Sbjct: 106 SKKMGQKILQPAIEIFVGIPSVVYGWLGLSVLVPFISKHFGGLGFSLLAGILVLAIMTLP 165 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +T ++ ++P ++ E S + + WQ ++ +P + PG++ +++ ++ + + Sbjct: 166 TITSVSADTIRSLPVEIREASYALGATRWQTIRHVLIPAAKPGILTAIILGLARAFGEAL 225 Query: 209 ASEMIVVGDTVIP 221 A +M++ VIP Sbjct: 226 AVQMVIGNRPVIP 238 >gi|241767947|ref|ZP_04765492.1| binding-protein-dependent transport systems inner membrane component [Acidovorax delafieldii 2AN] gi|241360877|gb|EER57705.1| binding-protein-dependent transport systems inner membrane component [Acidovorax delafieldii 2AN] Length = 203 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ + L+L + +F + I N G E+ Sbjct: 47 QMVRNIPALALIPLVILWFGIDE-SAKLFLIAVSVF---FPIYLNTFHGIRGVDPGLIEM 102 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 ++ +T W+ +R IILPG + G + G W IV+E S +G+G Sbjct: 103 GRTYGLTRWQLYRQIILPGALSSILVGLRFSLGLMWVILIVAETIS------AQSGIGYL 156 Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRF--LWHPLY 578 + E V++G+L+ F AL R+ WHP Y Sbjct: 157 TMNAREFLQTDIVLVGILLYALLGKLADVFAKALERYWLRWHPGY 201 >gi|227499962|ref|ZP_03930055.1| ABC superfamily ATP binding cassette transporter, membrane component [Anaerococcus tetradius ATCC 35098] gi|227218071|gb|EEI83344.1| ABC superfamily ATP binding cassette transporter, membrane component [Anaerococcus tetradius ATCC 35098] Length = 248 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 12/191 (6%) Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 I++ R+V+ ++I+ + + +GI IG++ + + P L P VF P++V Sbjct: 52 ALISLMRIVLSLLISLLFALAIGIPIGYKEEVYQLLYPLVSSLYPIPKVVFLPVLVLFFG 111 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 +L+ + +S ++ F +L +I P D S + +ILP I Sbjct: 112 LGNLSKIVLISSIIFFQ----LLLVIIDSVRNLPRDLYISMYSLSQSFKDILINLILPYI 167 Query: 503 FPYYVTGAITACGGAWNASIVSEV-ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P +T G A + SE AS+ GLG +I ++ + + ++ G+++ Sbjct: 168 IPDILTALRICIGTAISVLFFSETFASF-------DGLGYFILDTMGRREYEQMYGGIIV 220 Query: 562 MCCFVLALNRF 572 M L L + Sbjct: 221 MSLLGLILYKL 231 >gi|222149534|ref|YP_002550491.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221736516|gb|ACM37479.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 288 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 12/137 (8%) Query: 58 VHSLP----QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 +HSLP + +L+ V F+ A L +S L L+PI + + ++P++ Sbjct: 77 IHSLPILWADFQQTFLKSVLTGYVAGCGLGFIVAVLIDRSPFLKQGLLPIGNFVSALPVV 136 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 G V++F +P KV + F + + V ++ + N+ RDL R++ Sbjct: 137 GVAPIMVMWFGFDWPSKVAVVVIMTFFPMLVNTVQGLS-----AASNMERDL---MRTYA 188 Query: 174 LSGWQKFWYLGVPFSMP 190 S WQ L +P + P Sbjct: 189 ASWWQTLIKLRLPAAWP 205 >gi|254440557|ref|ZP_05054051.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198256003|gb|EDY80317.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 251 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 15/192 (7%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 I ++ A L A SRR +L P+L + Q++PI ++ P K++ L Sbjct: 70 IGVILGIETALLLALSRRARWLLRPMLVVAQAVPIFALAPVITLWLGYGMPSKIVTIALV 129 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 F I + +++ L +P L ++S W++ L +P+++P L+ + Sbjct: 130 TYFPIAS--------ALFDRLMALPAGLSDLSHLSGAGRWRETLLLRLPYAVPSLLSGLR 181 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +++ V +++G+ V G+G ++ L + A+++A L +L + L Sbjct: 182 LAV------VYGPLAVLIGEWVGSSQGLG-HLMLMSNGRGQTALMFAALIVLACLSLILW 234 Query: 258 LLFRPMIVWSNK 269 L + W+ Sbjct: 235 LAVEALSRWATT 246 >gi|89068478|ref|ZP_01155875.1| ABC-type sugar transport systems, permease component [Oceanicola granulosus HTCC2516] gi|89045897|gb|EAR51957.1| ABC-type sugar transport systems, permease component [Oceanicola granulosus HTCC2516] Length = 303 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 12/142 (8%) Query: 138 AIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 A++++ VW T + +IP D E +R + Q+FW + +P S P V Sbjct: 167 ALYSVIIVDVWKGVGIATVIFIAGIASIPSDYYEAARIDGATKAQQFWRITLPLSRPATV 226 Query: 194 WNMMMSMSGGW-FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + +S+ GG F + M G PG S + +I + + Y + T V+ Sbjct: 227 TVITLSLIGGLRTFDLIWTMTGGG------PGFSSDVVASIIYKQYQSGFYGLSTAGNVV 280 Query: 253 -FLYDQLLFRPMIVWSNKFRLE 273 FL L+ P+ W N+ ++ Sbjct: 281 LFLLIALVMVPLTTWMNRREID 302 >gi|227529931|ref|ZP_03959980.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227350116|gb|EEJ40407.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 299 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 5/126 (3%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L P+++++ IP + G+L TV+ ++ G G LAA +F + MT + Sbjct: 117 LQPLIELLVGIPSVVYGYLGLTVIVPNLRQVFGGTGFGI-LAATSVLFLMILPTMTSMII 175 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 SL +P+ + S + WQ + +P + G++ M+ M+ + +A +M++ Sbjct: 176 DSLQAVPQKYRQASAGLGATRWQTISRVIIPSAKSGILTAMVFGMARTFGEALAVQMVIG 235 Query: 216 GDTVIP 221 T++P Sbjct: 236 NTTIVP 241 >gi|239625292|ref|ZP_04668323.1| ABC sugar transporter [Clostridiales bacterium 1_7_47_FAA] gi|239519522|gb|EEQ59388.1| ABC sugar transporter [Clostridiales bacterium 1_7_47FAA] Length = 291 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLS 175 V Y +NL V+G+ A+ + S VW M + L +P DL+E + + Sbjct: 136 VNYLLNLGDYSVLGSPGTAMAGVVISAVWKQMPLMMIMLLSGLQTVPEDLKEAAEIDGAT 195 Query: 176 GWQKFWYLGVPFSMP 190 G QKF + VP MP Sbjct: 196 GLQKFLCITVPCIMP 210 >gi|194292722|ref|YP_002008629.1| alkanesulfonate transport protein, ABC superfamily, inner membrane component [Cupriavidus taiwanensis LMG 19424] gi|193226626|emb|CAQ72577.1| putative alkanesulfonate transport protein, ABC superfamily, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 265 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 8/145 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L+ I V+ T SR ++ P ++ I + ++ V+F K Sbjct: 72 RDLAGFAIGASAGLVFGTALGLSRLFERLVGPSFHTVKQISLFAWIPLISVWFGLGDAAK 131 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V+ LAA F + + ++ + +P DL EV+R R + Q W + +P + P Sbjct: 132 VVFLSLAAFFPV--------VLNTFEGIRAVPVDLLEVARVLRFNRTQVLWRVVLPSAAP 183 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVV 215 + + +++ W + +E ++V Sbjct: 184 SIFAGIHLALIYAWLATLGAEYLLV 208 >gi|126667736|ref|ZP_01738704.1| glycine/betaine/L-proline ABC transporter, permease protein [Marinobacter sp. ELB17] gi|126627839|gb|EAZ98468.1| glycine/betaine/L-proline ABC transporter, permease protein [Marinobacter sp. ELB17] Length = 282 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA SR L L P+LD+MQ+IP +L T+ F + + PG + IFAI + Sbjct: 118 AAHSRWLYKFLQPVLDLMQTIPPFVYLIPTLTLFGLGVVPGVIS----TVIFAI--AAPV 171 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM----PGLVWNMMMSMS 201 +T + + +P++L E ++F + Q + + +P +M G+ +M+S+S Sbjct: 172 RLT---HLGISQVPKELVEAGKAFGCTNRQLLFKVELPAAMSSIGAGITQCIMLSLS 225 >gi|39937222|ref|NP_949498.1| putative taurine ABC transport system permease [Rhodopseudomonas palustris CGA009] gi|192293002|ref|YP_001993607.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease [Rhodopseudomonas palustris TIE-1] gi|39651080|emb|CAE29603.1| putative taurine ABC transport system permease protein [Rhodopseudomonas palustris CGA009] gi|192286751|gb|ACF03132.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 277 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/112 (21%), Positives = 56/112 (50%), Gaps = 8/112 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ ++ IP L ++ T+++F + A+ F +F V+ + + Y ++ + Sbjct: 118 PVIEALRPIPPLAWIPITILWFGL--------GDAASYFLVFLGAVFPVFIATYTAIRGL 169 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 R+ + WQ F + +P S+P ++ + +++ GW VV +E+I Sbjct: 170 DRNQMNAALCLGAKPWQLFTDVLIPASLPIILPGLRIALGVGWMCVVTAELI 221 >gi|21623838|dbj|BAC00974.1| ABC-type transporter membrane permease component [Pseudomonas putida] Length = 265 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ R G Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVARKEG 264 >gi|322507919|gb|ADX03373.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii 1656-2] gi|323517513|gb|ADX91894.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii TCDC-AB0715] Length = 293 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S+I IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 111 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 167 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + + ++++P P G Sbjct: 168 VI-GTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 226 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 AW IVSE+ T+G+ +I + +F V +LI+ Sbjct: 227 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 267 >gi|221209331|ref|ZP_03582312.1| inner membrane ABC transporter permease protein YehW [Burkholderia multivorans CGD1] gi|221170019|gb|EEE02485.1| inner membrane ABC transporter permease protein YehW [Burkholderia multivorans CGD1] Length = 263 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 14/115 (12%) Query: 91 AKSRRLGMVLVP----ILDIMQSIPILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTS 145 A +R G +P I+DI Q+ P + L V L P +I L + +F S Sbjct: 94 AVTRPFGADFLPVARSIVDIGQTFPPVAVLALAVPAVGFGLKP-VLIALVLYGLLPVFES 152 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 + L ++PRD+ E +R +SGWQ+ + +P + P +V + +++ Sbjct: 153 TI--------AGLEDVPRDVVEAARGMGMSGWQRLMSVELPLAFPVIVNGIRLAV 199 >gi|189423688|ref|YP_001950865.1| binding-protein-dependent transporters inner membrane component [Geobacter lovleyi SZ] gi|189419947|gb|ACD94345.1| binding-protein-dependent transport systems inner membrane component [Geobacter lovleyi SZ] Length = 641 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 14/108 (12%) Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 +L N+PR+L S + S WQ W + +P ++PG+ +M+ G+ V MIV+ Sbjct: 513 DALSNVPRNLSAASLALGASRWQTAWRVVLPSALPGVFSAIMI----GFGRAVGETMIVL 568 Query: 216 ---GDTVI-------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 G+T I L + + IA+ I E L LY L + V+ Sbjct: 569 MATGNTPIMSWSLFNGLRSLSANIAVEIPEAPLNGTLYRTLFLSAVLL 616 >gi|86136259|ref|ZP_01054838.1| hypothetical taurine ABC transporter, permease protein [Roseobacter sp. MED193] gi|85827133|gb|EAQ47329.1| hypothetical taurine ABC transporter, permease protein [Roseobacter sp. MED193] Length = 273 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 18/155 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 LVP+ + IP + L V++F G G++ A I F FT V + Y ++ Sbjct: 116 LVPLTAALFPIPKIALLPLFVIWF-----GIDEGSKYALIAFGTFTPTV----VATYGAV 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS + +P +MPG++ + +S++ +VA+EM+ G Sbjct: 167 DNVDRSLIRMGQSFNLSWMSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEML--GAE 224 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGV 251 GIG+YI A DL + +L++LGV Sbjct: 225 Y----GIGAYILEAGSLYDLERLFAGVTILSLLGV 255 >gi|94310540|ref|YP_583750.1| substrate-binding region of ABC-type glycine betaine transport system [Cupriavidus metallidurans CH34] gi|93354392|gb|ABF08481.1| ABC-type transporter: periplasmic glycine betaine/choline-binding lipoprotein and permease components transmembrane [Cupriavidus metallidurans CH34] Length = 516 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 11/104 (10%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF--MNLYPGKVIGAELAAIFAIFTSQ 146 +AA+ RR G VL+ ++ ++Q+IP L L + + ++P A+ A+F Sbjct: 342 VAARRRRFGQVLLALVGMLQTIPSLALLAMLIPALGRIGIWP---------ALVALFLYA 392 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + + + L +P + + + + + Q WY+ +P S+P Sbjct: 393 LLPIVRNACTGLQEVPAGMRDAALALGMRPLQVLWYVELPLSLP 436 >gi|253577313|ref|ZP_04854631.1| phosphate ABC transporter, permease PstC [Paenibacillus sp. oral taxon 786 str. D14] gi|251843317|gb|EES71347.1| phosphate ABC transporter, permease PstC [Paenibacillus sp. oral taxon 786 str. D14] Length = 300 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/126 (21%), Positives = 65/126 (51%), Gaps = 5/126 (3%) Query: 100 LVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L P+++++ IP + GF+ +++ ++ +++PG+ +G LA + + +T Sbjct: 118 LQPVIELLAGIPSVVYGFVGLSIIVPFYRDIFPGQGLGI-LAGATVLSIMILPTITSIAT 176 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 +L +P L+E S + + WQ +P ++P L+ +++ M+ + +A +M++ Sbjct: 177 DALSALPPGLKEGSYALGATRWQTLSRTVLPTTLPSLLTGVVLGMARAFGEALAVQMVIG 236 Query: 216 GDTVIP 221 IP Sbjct: 237 NAPHIP 242 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 395 IIASIIWIPVGI-----WIGFRPHISSK-IQPFAQLLAAFPANV--FFPLVVSCVSYYHL 446 I+A++I P+GI + P K +QP +LLA P+ V F L + Y + Sbjct: 89 ILAALIAAPLGICAALFMVEIMPKFGKKYLQPVIELLAGIPSVVYGFVGLSIIVPFYRDI 148 Query: 447 NPNLWLSLL--------MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 P L +L MI T I + + SA P KE + + T W+ + Sbjct: 149 FPGQGLGILAGATVLSIMILPTITSIATDAL---SALPPGLKEGSYALGATRWQTLSRTV 205 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 LP P +TG + A+ ++ ++ H+ Sbjct: 206 LPTTLPSLLTGVVLGMARAFGEALAVQMVIGNAPHI 241 >gi|197295123|ref|YP_002153664.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944602|emb|CAR57206.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 324 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 10/176 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S I +P+GI G ++ +PF + PA F L+V+ + Y P + Sbjct: 140 VISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---A 195 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + + E A + + ++++PG+ P Sbjct: 196 IIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILL 255 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW IV+E+ ++G+ YI++ F V +L++ L + Sbjct: 256 GWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGIIGLGTD 305 >gi|162449593|ref|YP_001611960.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161160175|emb|CAN91480.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 286 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 8/127 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+ + P+ + +P L +L ++ IG L I I + + + Sbjct: 119 SRRIEEHVHPLFKALAQVPALAWLPLVMMVAG-------IGESLKLIL-IAQASLIPVAI 170 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + ++ + N+PR EV+R FR S Q + +P ++P + + ++ W +V E+ Sbjct: 171 NTFEGIKNVPRSYIEVARVFRFSHAQLLRKVVLPAAVPSIAVGIRYGLTQAWLSLVTVEL 230 Query: 213 IVVGDTV 219 + + V Sbjct: 231 LASSEGV 237 >gi|254249943|ref|ZP_04943263.1| ABC-type proline/glycine betaine transport systems, permease component [Burkholderia cenocepacia PC184] gi|124876444|gb|EAY66434.1| ABC-type proline/glycine betaine transport systems, permease component [Burkholderia cenocepacia PC184] Length = 293 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%) Query: 69 TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121 TL L + +S L + A A A +R G +P+ +DI Q+ P + L V Sbjct: 100 TLAHLGTVALSSLIGTIVAVAAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPA 159 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 L P +I L + IF S + L ++PRD+ + +R +SGWQ+ Sbjct: 160 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 210 Query: 182 YLGVPFSMPGLVWNMMMSM 200 + +P + P +V + +++ Sbjct: 211 SVELPLAFPVIVNGIRLAV 229 >gi|125623880|ref|YP_001032363.1| glycine betaine-binding periplasmic protein precursor [Lactococcus lactis subsp. cremoris MG1363] gi|6119854|gb|AAF04259.1|AF139575_2 glycine-betaine binding permease protein [Lactococcus lactis] gi|7212814|gb|AAF40474.1|AF184955_2 OpuABC [Lactococcus lactis subsp. cremoris MG1363] gi|124492688|emb|CAL97642.1| glycine betaine-binding periplasmic protein precursor [Lactococcus lactis subsp. cremoris MG1363] gi|300070654|gb|ADJ60054.1| glycine betaine-binding periplasmic protein precursor [Lactococcus lactis subsp. cremoris NZ9000] Length = 573 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS + ++ PILD MQ++P +L V +F G V G + IFA+ T ++ N Sbjct: 120 AKSELVAKIVQPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + + +L E + SF + QK + L P + M G+ +M+++S Sbjct: 177 L------GIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ D+ Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLAAVQSADI 252 >gi|313498505|gb|ADR59871.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas putida BIRD-1] Length = 282 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%) Query: 89 LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+ +RRL L+P+LD+MQ++P +L ++ F GKV A+FA Sbjct: 120 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 168 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 + + L I L + + S WQ+ + +P ++P GL ++MM++S Sbjct: 169 LPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 227 Query: 203 GWFFVVASEMI 213 VV + MI Sbjct: 228 ---MVVVASMI 235 >gi|290958242|ref|YP_003489424.1| binding-protein-dependent transporter [Streptomyces scabiei 87.22] gi|260647768|emb|CBG70873.1| putative binding-protein-dependent transport system [Streptomyces scabiei 87.22] Length = 324 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L+ +++ + L A+SR +L P+L++++ IP + + ++ F + Sbjct: 85 RILTGFLLAAVLGVAVGILVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLFPS----- 139 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 E +F FT+ + + S ++ + EE R+ + + +P ++P Sbjct: 140 ---NEQGIVFITFTAAFFPVLVSTRHAVRALTPVWEEAVRTMGGGRGRILASVVLPGALP 196 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 G+ + + + W V+++EMI Sbjct: 197 GIFGGLSVGIGVSWICVISAEMI 219 >gi|260555524|ref|ZP_05827745.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] gi|260412066|gb|EEX05363.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] Length = 314 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S+I IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + + ++++P P G Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 AW IVSE+ T+G+ +I + +F V +LI+ Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288 >gi|271968809|ref|YP_003343005.1| binding-protein-dependent transporter inner membrane component [Streptosporangium roseum DSM 43021] gi|270511984|gb|ACZ90262.1| binding-protein-dependent transport systems inner membrane component [Streptosporangium roseum DSM 43021] Length = 248 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 10/161 (6%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++A+++ + G IG ++ ++P+ L + P PL++ ++ + L+ Sbjct: 64 VLAAVLGVLTGFLIGRHHLLAVALEPYLVALYSVPLIALVPLMII---WFGIGQGFLLAT 120 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + + T ++F G + E+A ++ +TG R ++LPG PY G + Sbjct: 121 I-VLSTGIMLVFPAATGTRESVRAYGELARAYRVTGHRLLLKVVLPGALPYIAAGLRISV 179 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 A A +V + GH GLG ++++ + EV Sbjct: 180 QRALMAVVVGQFLV-GH-----PGLGTLLSDARARLDADEV 214 >gi|159186087|ref|NP_356394.2| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|159141221|gb|AAK89179.2| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 258 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 18/193 (9%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT+ V+ II + + + G+W+G P ++ + PF + + A P V P+ V Sbjct: 60 ITLSETVLGYIIGTGLGVGAGVWLGLSPFVARVLDPFIKAVNAIPRVVLAPIFV-----L 114 Query: 445 HLNPNLWLSLLMIFGTQWYI-LFNVIAGASAFPNDFKEVASSFHITGWR---WWRYIILP 500 L LW + + +++ FN + G V S+ I G + R++ P Sbjct: 115 WLGLGLWSKVALAVTLVFFVTFFNAMQGVREVN---PVVLSNTRILGAKRSDLLRHVYFP 171 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 + ++ T+ G A +I+ E + GLG IA S V G++ Sbjct: 172 AAASWILSSLRTSVGFAVVGAIIGEYLG------ASAGLGYLIARSEGNFDAVGVFAGII 225 Query: 561 IMCCFVLALNRFL 573 I+ FVL ++ L Sbjct: 226 ILAVFVLIIDLIL 238 >gi|71737350|ref|YP_277000.1| taurine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557903|gb|AAZ37114.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 291 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 11/208 (5%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 S G+++ Y D LG ++ R+ + + A + IP+GI IG P Sbjct: 77 SKGWLLATKGYMDATLWQHLGA-SLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLI 135 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P + PL+V + L L L IF I G Sbjct: 136 EFYRPIPPLAYLPLIVIWFGIGEFSKVL-LIYLAIFAP---IAIATATGVRTVDPIKVRA 191 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S T W+ R+++LP P +TG G W+ + +E+ + T+GLG Sbjct: 192 AQSLGATLWQLIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFM 245 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570 + + + VVLG+L++ A+ Sbjct: 246 VQSAAQFLVTDVVVLGILVIAVIAFAME 273 >gi|26990271|ref|NP_745696.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida KT2440] gi|24985221|gb|AAN69160.1|AE016550_2 amino acid transporter permease protein, putative [Pseudomonas putida KT2440] Length = 299 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%) Query: 89 LAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+ +RRL L+P+LD+MQ++P +L ++ F GKV A+FA Sbjct: 137 LAARPLARRL---LLPVLDVMQTLPAFVYLIPVLMLF---GLGKV-----PAVFATLIYA 185 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSG 202 + + L I L + + S WQ+ + +P ++P GL ++MM++S Sbjct: 186 LPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALS- 244 Query: 203 GWFFVVASEMI 213 VV + MI Sbjct: 245 ---MVVVASMI 252 >gi|303249561|ref|ZP_07335768.1| spermidine/putrescine ABC transporter membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651635|gb|EFL81784.1| spermidine/putrescine ABC transporter membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 215 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 73 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 132 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P IG+ I + A+ A+ Sbjct: 133 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 186 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 187 SIALTVLMALMLY--VYYRANKLLNKKVELE 215 >gi|257095736|ref|YP_003169377.1| molybdate ABC transporter inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048260|gb|ACV37448.1| molybdate ABC transporter, inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 220 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 12/98 (12%) Query: 144 TSQVWNMTFS---MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 S ++N+ F+ M ++ IPR++ E + LS WQ F + +P + PG+ + ++ Sbjct: 93 ASLIFNLPFAVQPMQRAFAAIPREVREAAWVSGLSRWQTFLRVELPLAWPGIAAALALTF 152 Query: 201 SG--GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + G F VV ++VG + LPG IA+AI +Q Sbjct: 153 AHTLGEFGVV----LMVGGS---LPGETRTIAIAIYDQ 183 >gi|116512254|ref|YP_809470.1| ABC-type proline/glycine betaine transport system, permease component [Lactococcus lactis subsp. cremoris SK11] gi|116107908|gb|ABJ73048.1| ABC-type proline/glycine betaine transport system, permease component [Lactococcus lactis subsp. cremoris SK11] Length = 573 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS + ++ PILD MQ++P +L V +F G V G + IFA+ T ++ N Sbjct: 120 AKSELVAKIVQPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + + +L E + SF + QK + L P + M G+ +M+++S Sbjct: 177 L------GIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ D+ Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLAAVQSADI 252 >gi|327393231|dbj|BAK10653.1| inner membrane ABC transporter permease protein YehY [Pantoea ananatis AJ13355] Length = 393 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 26/226 (11%) Query: 57 DVHSLPQYASRTT---------LRMLSAMVI-SLLFTFVYATLAAKSRRLGMVLVPILDI 106 D+ L +YA+R + L +L+A V+ +LL F + + + +L++ Sbjct: 166 DLSLLKEYANRQSVFDAALLRHLTLLAATVLPALLIAFPLGIVLYRRSGWQSSVFGVLNV 225 Query: 107 MQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSMYQSL 158 +Q++P + G L + +P G + G +A A+ A+ + + S+ L Sbjct: 226 VQTVPSVALFGLLIAPLAGLAKRFPWAGAWGISGIGMAPALIALVLYALLPLVRSVVTGL 285 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +P D+ E +R LSG Q+F+ + VP ++P VW +SG VV + + V Sbjct: 286 QQVPPDVRESARGMGLSGRQQFFAVEVPLALP--VW-----LSGIRVVVVQTLGMAVVAA 338 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 +I G G+ I + L +L ++ ++ + D LFR +I Sbjct: 339 LIGAGGFGAIIFQGLLSNALDLVLLGVIPVIAMAVTLDA-LFRLLI 383 >gi|326796543|ref|YP_004314363.1| choline ABC transporter permease [Marinomonas mediterranea MMB-1] gi|326547307|gb|ADZ92527.1| choline ABC transporter, permease protein [Marinomonas mediterranea MMB-1] Length = 281 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T + ++SA +S+L AA L +L P+LD+MQ+IP +L T++ F + Sbjct: 95 QTLVLVVSATFVSVLIGVPIGIAAAHRPWLYTILRPVLDLMQTIPTFVYLIPTLILFGLG 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 PG + IFAI + +T Y + +P +L E +F + + + + + Sbjct: 155 YVPGLI----STIIFAI--AAPIRLT---YLGVSKVPSELLEAGLAFGCTKSKLLYRVEL 205 Query: 186 PFSMP----GLVWNMMMSMS 201 P +MP G+ +M+S+S Sbjct: 206 PAAMPSIMAGVTQCIMLSLS 225 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 36/205 (17%) Query: 330 NFLQLCSNQRVSYMLDIF-W---FCVVCGVAIGIAW---QSIGYIVNHFTYQDVLYVI-- 380 +F+ + + ++D+F W ++ +A+G AW +S+G +V F +L +I Sbjct: 31 DFIAITLETIIMALVDVFEWIPPLALIAMIAVG-AWFLHRSVGLVV--FIVAALLLIINL 87 Query: 381 --WLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 WL I T+ VV ++ +I +P+GI RP + + ++P L+ P Sbjct: 88 GYWLETIQTLVLVVSATFVSVLIGVPIGIAAAHRPWLYTILRPVLDLMQTIP-------- 139 Query: 438 VSCVSYYHLNPNLWL-SLLMIFGTQWYILFNVIA-------GASAFPNDFKEVASSFHIT 489 ++ +L P L L L + G I+F + A G S P++ E +F T Sbjct: 140 ----TFVYLIPTLILFGLGYVPGLISTIIFAIAAPIRLTYLGVSKVPSELLEAGLAFGCT 195 Query: 490 GWRWWRYIILPGIFPYYVTGAITAC 514 + + LP P + G +T C Sbjct: 196 KSKLLYRVELPAAMPSIMAG-VTQC 219 >gi|227893560|ref|ZP_04011365.1| PTS family oligomeric beta-glucoside porter component IIC [Lactobacillus ultunensis DSM 16047] gi|227864658|gb|EEJ72079.1| PTS family oligomeric beta-glucoside porter component IIC [Lactobacillus ultunensis DSM 16047] Length = 264 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 19/123 (15%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M AMV+SLL T++Y L K+++L + + S+P +FT L P + Sbjct: 137 MFVAMVVSLLITYIYCKLE-KNKKL------TIKMPASVPPAVSTSFTA-----LIPAII 184 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS-----FRLSGWQKFWYLGVP 186 IGA + I +FT WN +M +L P LE + RS F L + W+ G+ Sbjct: 185 IGAGVLVIRFLFTLTPWNDIHNMLYTLIQTP--LEHLGRSIWALLFLLFLSEVLWFFGIH 242 Query: 187 FSM 189 SM Sbjct: 243 GSM 245 >gi|237726314|ref|ZP_04556795.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434840|gb|EEO44917.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 395 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135 VY + A R L P+++++ IP + GF V+ NL G+ + G+ Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKIFNLPVGETGLAGSI 256 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + AI A+ T +T S ++ N PR + E S + + WQ + + +PFS+ G+ Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSISGITSG 311 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249 +++ + +A M+ VI PL I + IA + E Y L +L Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371 Query: 250 GVIFLYDQLL 259 GV+ + +L Sbjct: 372 GVVLFFITML 381 >gi|170734924|ref|YP_001774038.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169820962|gb|ACA95543.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 324 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 10/176 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S I +P+GI G ++ +PF + PA F L+V+ + Y P + Sbjct: 140 VISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---A 195 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + + E A + + ++++PG+ P Sbjct: 196 IIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILL 255 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW IV+E+ ++G+ YI++ F V +L++ L + Sbjct: 256 GWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGIIGLGTD 305 >gi|32034639|ref|ZP_00134786.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208013|ref|YP_001053238.1| putative ABC transporter permease protein [Actinobacillus pleuropneumoniae L20] gi|126096805|gb|ABN73633.1| putative ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 249 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 20/204 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ T + +++ + + L + A + S+ L L+P+L I Q+IP+ F + Sbjct: 52 QHGQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPV-----FAIAP 106 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + L+ G + +++A I V T + Y L N P+ E++++ + Sbjct: 107 LLVLWLGYGMASKIAMTVLIIYFPV---TAACYDGLRNTPKAYLELAKTLEIKPLAILLR 163 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P L + +++S V VVG+ V G+G Y+ L + +L Sbjct: 164 VRLPAALPALASGLRIAVS------VVPIGAVVGEWVGSSQGLG-YLMLHANARMQTDLL 216 Query: 243 YAMLTMLGVI-----FLYDQLLFR 261 +A LT+L ++ F+ D+LL R Sbjct: 217 FAALTVLLLMTLCLYFITDRLLRR 240 >gi|15901253|ref|NP_345857.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae TIGR4] gi|15903299|ref|NP_358849.1| phosphate ABC transporter permease [Streptococcus pneumoniae R6] gi|111658593|ref|ZP_01409250.1| hypothetical protein SpneT_02000268 [Streptococcus pneumoniae TIGR4] gi|116516273|ref|YP_816698.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae D39] gi|148985647|ref|ZP_01818801.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP3-BS71] gi|148993042|ref|ZP_01822636.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP9-BS68] gi|148997547|ref|ZP_01825152.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP11-BS70] gi|149007331|ref|ZP_01830989.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP18-BS74] gi|149011639|ref|ZP_01832835.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP19-BS75] gi|149019354|ref|ZP_01834716.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP23-BS72] gi|168483976|ref|ZP_02708928.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CDC1873-00] gi|168486093|ref|ZP_02710601.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CDC1087-00] gi|168489563|ref|ZP_02713762.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae SP195] gi|168493302|ref|ZP_02717445.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CDC3059-06] gi|168575858|ref|ZP_02721773.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae MLV-016] gi|169833586|ref|YP_001694834.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae Hungary19A-6] gi|182684358|ref|YP_001836105.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae CGSP14] gi|194396785|ref|YP_002038047.1| phosphate ABC transporter permease [Streptococcus pneumoniae G54] gi|225854846|ref|YP_002736358.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae JJA] gi|225857034|ref|YP_002738545.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae P1031] gi|225859164|ref|YP_002740674.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae 70585] gi|225860821|ref|YP_002742330.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae Taiwan19F-14] gi|237649325|ref|ZP_04523577.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CCRI 1974] gi|237820944|ref|ZP_04596789.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CCRI 1974M2] gi|298229508|ref|ZP_06963189.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255459|ref|ZP_06979045.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502650|ref|YP_003724590.1| phosphate ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|303254554|ref|ZP_07340658.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae BS455] gi|303258994|ref|ZP_07344973.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP-BS293] gi|303261678|ref|ZP_07347625.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP14-BS292] gi|303264347|ref|ZP_07350267.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae BS397] gi|303265854|ref|ZP_07351751.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae BS457] gi|303268187|ref|ZP_07353986.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae BS458] gi|307068053|ref|YP_003877019.1| phosphate ABC transporter permease [Streptococcus pneumoniae AP200] gi|307127032|ref|YP_003879063.1| phosphate ABC transporter permeae PstC [Streptococcus pneumoniae 670-6B] gi|14972887|gb|AAK75497.1| putative phosphate ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15458895|gb|AAL00060.1| ABC transporter membrane-spanning permease - phosphate transport [Streptococcus pneumoniae R6] gi|116076849|gb|ABJ54569.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae D39] gi|147756602|gb|EDK63643.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP11-BS70] gi|147761135|gb|EDK68103.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP18-BS74] gi|147764070|gb|EDK71002.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP19-BS75] gi|147922128|gb|EDK73250.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP3-BS71] gi|147928243|gb|EDK79260.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP9-BS68] gi|147931224|gb|EDK82203.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP23-BS72] gi|168996088|gb|ACA36700.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae Hungary19A-6] gi|172042790|gb|EDT50836.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CDC1873-00] gi|182629692|gb|ACB90640.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae CGSP14] gi|183570723|gb|EDT91251.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CDC1087-00] gi|183572000|gb|EDT92528.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae SP195] gi|183576625|gb|EDT97153.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CDC3059-06] gi|183578352|gb|EDT98880.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae MLV-016] gi|194356452|gb|ACF54900.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae G54] gi|225721673|gb|ACO17527.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae 70585] gi|225723073|gb|ACO18926.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae JJA] gi|225724837|gb|ACO20689.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae P1031] gi|225727195|gb|ACO23046.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae Taiwan19F-14] gi|298238245|gb|ADI69376.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|301794440|emb|CBW36874.1| putative phosphate ABC transporter permease protein [Streptococcus pneumoniae INV104] gi|301800265|emb|CBW32885.1| putative phosphate ABC transporter permease protein [Streptococcus pneumoniae OXC141] gi|301802140|emb|CBW34877.1| putative phosphate ABC transporter permease protein [Streptococcus pneumoniae INV200] gi|302598522|gb|EFL65564.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae BS455] gi|302637258|gb|EFL67746.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP14-BS292] gi|302639937|gb|EFL70393.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP-BS293] gi|302642266|gb|EFL72614.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae BS458] gi|302644589|gb|EFL74839.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae BS457] gi|302646159|gb|EFL76386.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae BS397] gi|306409590|gb|ADM85017.1| ABC-type phosphate transport system, permease component [Streptococcus pneumoniae AP200] gi|306484094|gb|ADM90963.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae 670-6B] gi|327389585|gb|EGE87930.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae GA04375] gi|332073706|gb|EGI84185.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae GA17570] gi|332074721|gb|EGI85195.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae GA17545] gi|332074980|gb|EGI85452.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae GA41301] gi|332200841|gb|EGJ14913.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae GA41317] gi|332201850|gb|EGJ15920.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae GA47368] gi|332203229|gb|EGJ17297.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae GA47901] Length = 305 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ VV + +++ G G L+ I +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQVVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SFAMGATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|168180040|ref|ZP_02614704.1| putative ABC transporter, permease protein [Clostridium botulinum NCTC 2916] gi|170757084|ref|YP_001781022.1| putative ABC transporter, permease protein [Clostridium botulinum B1 str. Okra] gi|226948648|ref|YP_002803739.1| putative ABC transporter permease [Clostridium botulinum A2 str. Kyoto] gi|169122296|gb|ACA46132.1| putative ABC transporter, permease protein [Clostridium botulinum B1 str. Okra] gi|182668926|gb|EDT80902.1| putative ABC transporter, permease protein [Clostridium botulinum NCTC 2916] gi|226842358|gb|ACO85024.1| putative ABC transporter, permease protein [Clostridium botulinum A2 str. Kyoto] Length = 253 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 5/141 (3%) Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G + ++P + A P V ++++ V + ++ S+LM F I NV Sbjct: 91 GINVFMEELLEPLVVTIKATP--VMSIIIIALVWLKSSSVAIFTSILMCFPI---IYTNV 145 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 ++G + E+A+ + + I LP PY ++G + G W S+ SEV S Sbjct: 146 LSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPYIISGILMCLGIGWKVSVASEVLS 205 Query: 529 WGHIHLRTTGLGAYIAESTEK 549 + L A +TE+ Sbjct: 206 TPKYSIGLNLLNAKATLATEE 226 >gi|76781920|gb|ABA54729.1| AbsT2 [Alcaligenes sp. O-1] Length = 244 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 76/202 (37%), Gaps = 19/202 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M RVV IA ++ + +G+ + I PF + L FPL + Sbjct: 51 SMKRVVSGFAIAVVVGVSIGVLMASSRIAEDVIDPFVEFLRPISPLALFPLAILWFGIGD 110 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++L F +L + AG ASS + W R +ILPG P Sbjct: 111 ASKIFLIALSCCF----PVLLSTYAGVQGIDVALVRAASSLGASRWEIVRNVILPGSIPS 166 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G A I SE+ G ++ G+G + ++ + + G+ I+ Sbjct: 167 ILTGVRISWGIALIVIIASEMV--GAVN----GIGFMVLDAQQTFRTERLFSGIAIIAAI 220 Query: 566 VLALNRFL---------WHPLY 578 +R L WH Y Sbjct: 221 GYGTDRALRWLRRSLVPWHQEY 242 >gi|146276640|ref|YP_001166799.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145554881|gb|ABP69494.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 238 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 20/161 (12%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A S RLG +L P+L I Q++P+ F + + L+ G +G+++A + I + + Sbjct: 75 ALSDRLGQILRPLLVISQALPV-----FALAPILTLWLGYGMGSKVAVVVLI---TFFPV 126 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 +++ L P +++R R W++ +L +P ++P L + ++ V A Sbjct: 127 ASALHDGLRATPEAALDLARLARAPRWRELMWLRLPHALPHLAAALRIAA------VYAP 180 Query: 211 EMIVVGDTVIPLPGIGSYIALAIK--EQDL----LAILYAM 245 V+G+ V G+G + LA + DL LA+L AM Sbjct: 181 IGAVIGEWVGSSAGLGHLMLLANARMKTDLMFAALAVLAAM 221 >gi|319957569|ref|YP_004168832.1| binding-protein-dependent transport systems inner membrane component [Nitratifractor salsuginis DSM 16511] gi|319419973|gb|ADV47083.1| binding-protein-dependent transport systems inner membrane component [Nitratifractor salsuginis DSM 16511] Length = 260 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 39/194 (20%), Positives = 83/194 (42%), Gaps = 10/194 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T+ RV V ++ +I +G+ GF S +P +L P + +V + + Sbjct: 68 SLTIERVAVGFAVSLVIGTLLGLLAGFFVTASITSRPIITILMGMPPIAW---IVLAMIW 124 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + N+ + +I + + + G + F E+A +F + + I LP IF Sbjct: 125 FGMG-NMTVEFTVIVASLPIVFIGALQGTRTLEDKFDEMADTFKVPRMMKFTDIYLPHIF 183 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 Y ++A G AW +++E+ + + G+GA +A + + + V+IM Sbjct: 184 SYIFPAWVSALGMAWKIVVMAELLA------ASDGIGAALAMARSQLDTDTAMALVVIMI 237 Query: 564 CFVLALNRFLWHPL 577 ++ + P+ Sbjct: 238 GSLMIVEYIFLEPI 251 >gi|304394282|ref|ZP_07376205.1| binding-protein-dependent transport systems inner membrane component [Ahrensia sp. R2A130] gi|303293722|gb|EFL88099.1| binding-protein-dependent transport systems inner membrane component [Ahrensia sp. R2A130] Length = 277 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 17/156 (10%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 LVP++ + IP + L V++F G G++ A I F FT V + Y ++ Sbjct: 120 LVPLVAAIFPIPKIALLPLFVIWF-----GIGEGSKYALIAFGTFTPTV----VATYGAV 170 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + R L + +SF L W + +P ++PG++ + +S++ +VA+EM+ G T Sbjct: 171 DAVDRTLIRMGQSFGLPWWSIVRKIVLPGALPGILSGLRVSLAIAIILLVAAEML--GAT 228 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 GIG+YI A D L L+A +T+L ++ L Sbjct: 229 Y----GIGAYILEAGSLYD-LERLFAGVTILSLLGL 259 >gi|254563041|ref|YP_003070136.1| ABC transporter permease [Methylobacterium extorquens DM4] gi|254270319|emb|CAX26315.1| ABC transporter, permease [Methylobacterium extorquens DM4] Length = 353 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S++ +P+GI G +P I+ +P + + PA F L+V+ + Y P + + ++ Sbjct: 171 ISSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 229 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 F Q ++ N E A + R R +I+P + P G Sbjct: 230 GTFFQQVLVIANTTRRVDPL---LIEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 286 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 AW IV+E+ ++G+ +I + F V +L++ +A + Sbjct: 287 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 335 >gi|229587818|ref|YP_002869937.1| taurine ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359684|emb|CAY46532.1| taurine ABC transport system, permease protein [Pseudomonas fluorescens SBW25] Length = 278 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G+++ Y D LG ++ R+ + + A + +PVGI IG + P + Sbjct: 66 GWLLATSGYMDSTLWQHLGA-SLSRIGLGLGFAVLTAVPVGIAIGSNRIARGVLDPLIEF 124 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL+V L+ L L L IF I G A Sbjct: 125 YRPIPPLAYLPLIVIWCGIGELSKVL-LIYLAIFAP---IAIATATGVRTVDPAKLRAAQ 180 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S + + R++ILP P +TG G W+ + +E+ + T+GLG + Sbjct: 181 SLGASRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQ 234 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 + + VVLG+L++ A+ Sbjct: 235 SAAQFLVTDVVVLGILVIALIAFAME 260 >gi|255693909|ref|ZP_05417584.1| phosphate ABC transporter, permease protein PstC [Bacteroides finegoldii DSM 17565] gi|260620274|gb|EEX43145.1| phosphate ABC transporter, permease protein PstC [Bacteroides finegoldii DSM 17565] Length = 398 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 10/186 (5%) Query: 100 LVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L P+++++ IP + GF V+ L+ V + LA + + + Sbjct: 212 LKPVIELLSGIPSVVYGFFGLIVIVPLIQKLFDLPVGESGLAGSIVLAIMALPTIITVTE 271 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N PR + E S + S WQ + + +P+S+ G+ +++ + +A M+ Sbjct: 272 DAMRNCPRAMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAIGETMAVLMVTG 331 Query: 216 GDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 VI PL I + IA + E Y L +LGV+ + L+ + + + Sbjct: 332 NAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYQALFLLGVVLFFITLIINFSVEYISS 391 Query: 270 FRLERT 275 L+R+ Sbjct: 392 KGLKRS 397 >gi|254466399|ref|ZP_05079810.1| binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium Y4I] gi|206687307|gb|EDZ47789.1| binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium Y4I] Length = 421 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + +I+ IP+G +G P + + P PLV+ + Sbjct: 230 SLARVIAGFVAGAIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + AG S A S + W+ R++I+P P Sbjct: 290 TGK----IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEV 526 TGA A G W + +E+ Sbjct: 346 IFTGARVAMGVCWGTVVAAEL 366 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 8/114 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + +++F GK++ +F + +W MT + + + Sbjct: 264 PIVEFMRPVPPLALIPLVIIWFGIWETGKIV--------LLFLAALWIMTIAARAGVSGV 315 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + S S WQ ++ VP S+P + ++M W VVA+E++ Sbjct: 316 NISKIHAAYSLGASKWQIMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369 >gi|330502313|ref|YP_004379182.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina NK-01] gi|328916599|gb|AEB57430.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina NK-01] Length = 271 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 68/175 (38%), Gaps = 12/175 (6%) Query: 47 DIVDIVPITLDVHSLP----QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 D +D + T D S Q + + R+ + I+ L V A G L P Sbjct: 53 DAIDRLAFTEDKRSGQYLFWQDTASSLQRLGLGLGIAALLGLVLGIAAGSVPLFGAPLSP 112 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +L ++ IP L L + F EL+ + I + + Q IP Sbjct: 113 LLTVLSMIPPLAILPILFIVFGL--------GELSKVMLIVIGITPCIARDIEQRAREIP 164 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 +L +++ + W L +P MP L+ ++ + + W F++A+E I D Sbjct: 165 GELLIKAQTLGANSWTLILRLVLPQLMPRLLISLRLMLGSAWLFLIAAEAIASTD 219 >gi|170767687|ref|ZP_02902140.1| taurine uptake ABC transporter, permease protein [Escherichia albertii TW07627] gi|170123175|gb|EDS92106.1| taurine uptake ABC transporter, permease protein [Escherichia albertii TW07627] Length = 275 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 12/187 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + + A +I IPVGI +G P + P +L P + PL+V Sbjct: 83 SLTRIALALFAAVLIGIPVGIAMGLSPTTRGILDPVIELYRPVPPLAYLPLMVIWFGIGE 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L L IF + + +AG + A S + + ++ILPG P Sbjct: 143 TT-KILLIYLAIFAP---VAMSALAGVKSAQQVRLRAAQSLGASRAQVLWFVILPGALPE 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC-- 563 +TG G + + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 199 ILTGLRIGLGVGGSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVI 252 Query: 564 CFVLALN 570 F+L L Sbjct: 253 AFLLELG 259 >gi|169796457|ref|YP_001714250.1| ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|213156431|ref|YP_002318851.1| binding-protein-dependent transport systems inner membrane component [Acinetobacter baumannii AB0057] gi|215483920|ref|YP_002326145.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB307-0294] gi|301347140|ref|ZP_07227881.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB056] gi|301510144|ref|ZP_07235381.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB058] gi|301594671|ref|ZP_07239679.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB059] gi|332855005|ref|ZP_08435661.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332869477|ref|ZP_08438795.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] gi|169149384|emb|CAM87268.1| putative transport protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|213055591|gb|ACJ40493.1| binding-protein-dependent transport systems inner membrane component [Acinetobacter baumannii AB0057] gi|213986111|gb|ACJ56410.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB307-0294] gi|332727699|gb|EGJ59112.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332732707|gb|EGJ63929.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] Length = 314 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S+I IP+GI GF IS +PF + PA F L V+ + +N ++++ Sbjct: 132 ISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILG---INDAPKIAII 188 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +I GT + + + E + + ++++P P G Sbjct: 189 VI-GTLFQQILIIANTTRMVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYRDLRVLLG 247 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 AW IVSE+ T+G+ +I + +F V +LI+ Sbjct: 248 WAWTYLIVSELIG------TTSGITWFITQQARYQNFDNVYAAILII 288 >gi|293604869|ref|ZP_06687266.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292816697|gb|EFF75781.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 256 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 10/182 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+V + A I+ IP+GI +G + P L P+ + PL + ++ + Sbjct: 70 RVMVGFLAAVIVAIPLGILLGTSKVARAVFDPIISFLRPLPSMSWIPL---SLLWFGITE 126 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 S++ + G+ L V+ + A + W+ R ++ PG P ++ Sbjct: 127 TQKYSIVFM-GSFVPALLYVMEASRGIDPVLVRAARNLGANRWQVMREVLFPGCLPQILS 185 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G G +W I +E+ + GLG I E VVLG++++ VL Sbjct: 186 GMKIILGLSWTCVISAELVA------SKEGLGFMIMNGKEFFQTDTVVLGMVLISFTVLV 239 Query: 569 LN 570 + Sbjct: 240 TD 241 >gi|260597339|ref|YP_003209910.1| alkanesulfonate transporter permease subunit [Cronobacter turicensis z3032] gi|260216516|emb|CBA29702.1| Putative aliphatic sulfonates transport permease protein ssuC [Cronobacter turicensis z3032] Length = 263 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + NI Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRNIDS 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D++ ILYA+L L L +LL R + W ++ + Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIILYALLGKLA--DLSARLLERVWLRWHPAYQTKEANA 263 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 17/134 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G + E+A S+ ++G+ +R +ILPG P + G A Sbjct: 130 LVALGTLFPIYINTWHGIRNIDSGLLEMARSYGLSGFSLFRQVILPGALPSIMVGVRFAL 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL----N 570 G W IV+E S +G+G Y+A + + +VV+ +I+ + L Sbjct: 190 GLMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVVAIILYALLGKLADLSA 242 Query: 571 RFL------WHPLY 578 R L WHP Y Sbjct: 243 RLLERVWLRWHPAY 256 >gi|261367285|ref|ZP_05980168.1| putative ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] gi|282570888|gb|EFB76423.1| putative ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] Length = 253 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF-NVIAGASAFP 476 + P QL+ A P F L + VS +L S+++ F +++ V+AG + Sbjct: 91 VDPVMQLIRAMPVASFVILALLWVSGSNL------SVIVSFTHVLPVVYAGVLAGIADTD 144 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E+A + + RYI LPGIFP + I A G W + + +EV Sbjct: 145 PQLLEMARVYRLPWMARLRYIWLPGIFPSFSESCIAAMGMCWKSGVSAEV 194 >gi|218548809|ref|YP_002382600.1| ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218356350|emb|CAQ88968.1| putative ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] Length = 244 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 11/196 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +I+LG +F V + A +I +P GI + RP + Q+ N PL V Sbjct: 47 LIYLGQQHLFLVFTSLFFALLIGVPSGILLS-RPAARGFAEHAMQIFNV--GNTLPPLAV 103 Query: 439 SCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 ++ L +++ +F + I+ N AG +A P KE A +T W+ + Sbjct: 104 LALAMIILGIGDTPAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLYLV 163 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 LP +P ++G A A+I+ A + + + G I FP ++L Sbjct: 164 ELPNAWPVMLSGIRIA------AAIIVGTAPLAFL-IGASSYGELIFPGIYLNDFPTLIL 216 Query: 558 GVLIMCCFVLALNRFL 573 G F L L+ L Sbjct: 217 GATATALFALILDSLL 232 >gi|312138999|ref|YP_004006335.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311888338|emb|CBH47650.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 266 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 12/173 (6%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IP+G+ +G + ++ L+ P + PL + + Y + ++ +IF Sbjct: 90 IPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPLTLLIIGYGDRS-----TIFLIFVAA 144 Query: 462 WY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 ++ IL N G + P E A+ + I++P +G A G +W Sbjct: 145 FFPILLNTTVGVAQVPPRLLEAAAMLGTPKAKTLYKIVIPSAMQSITSGLRIALGLSWVV 204 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +V E +TGLGA I ++ + ++ G++ + +RF+ Sbjct: 205 LVVGETVGI------STGLGAMITQARDMSRTDLIIAGMVFIGLAGFVTDRFM 251 >gi|302537611|ref|ZP_07289953.1| nitrate ABC transporter, permease [Streptomyces sp. C] gi|302446506|gb|EFL18322.1| nitrate ABC transporter, permease [Streptomyces sp. C] Length = 304 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 7/151 (4%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 +L VIW ++ R ++ ++A I P+G+ + + + I P Q L + P+ + P Sbjct: 98 LLEVIW---TSVSRGLLGFLLALAIGTPLGLLVARVKFVRAAIGPILQGLQSLPSVAWVP 154 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 V ++ LN + +++++ G I +++G P F + TG R Sbjct: 155 ---PAVLWFGLNDAMMYTVILL-GAVPSIANGLVSGIDQIPPLFLRAGRTLGATGLRGAW 210 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEV 526 +++LP P YV G +W + + +E+ Sbjct: 211 HVVLPAALPGYVAGLKQGWAFSWRSLMAAEI 241 >gi|265751858|ref|ZP_06087651.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263236650|gb|EEZ22120.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 395 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135 VY + A R L P+++++ IP + GF V+ NL G+ + G+ Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKIFNLPVGETGLAGSI 256 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + AI A+ T +T S ++ N PR + E S + + WQ + + +PFS+ G+ Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSISGITSG 311 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249 +++ + +A M+ VI PL I + IA + E Y L +L Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371 Query: 250 GVIFLYDQLL 259 GV+ + +L Sbjct: 372 GVVLFFITML 381 >gi|262277475|ref|ZP_06055268.1| glycine betaine/L-proline transport system permease protein ProW [alpha proteobacterium HIMB114] gi|262224578|gb|EEY75037.1| glycine betaine/L-proline transport system permease protein ProW [alpha proteobacterium HIMB114] Length = 295 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 16/194 (8%) Query: 66 SRTTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + +TL ++S A ++ LL + AKS ++ +V+ PILD MQ+IP +L + M Sbjct: 100 TMSTLAIISVATLLCLLIGAPIGIVMAKSNKVSVVMSPILDTMQTIPTFVYL---IPIIM 156 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L GKV G I+AI + +T + + L E ++ +S + + + Sbjct: 157 LLGIGKVPGLIAVCIYAI--PPIVRLT---NLGIREVNAKLIEAGKALGISKFVILYRIE 211 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 P ++P + M+G ++ S +VV ++I + G+G I +I Q L L Sbjct: 212 FPLALPSI-------MTGVNQTIMMSLAMVVIASMIGVSGLGVPILRSISNQYLALGLMN 264 Query: 245 MLTMLGVIFLYDQL 258 L ++ + ++D++ Sbjct: 265 GLAIVALAIIFDRI 278 >gi|45358760|ref|NP_988317.1| binding-protein dependent transport system inner membrane protein [Methanococcus maripaludis S2] gi|45047626|emb|CAF30753.1| transport permease protein [Methanococcus maripaludis S2] Length = 253 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV++ IA IP+G+ +G+ I+ +LL P + PL ++++ Sbjct: 59 VSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPL---ALAWF 115 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + ++ G + IL N I+G + P E A + + + +++P P Sbjct: 116 GIGES-SMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSP 174 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG G AW + +E+ Sbjct: 175 DILTGLRVGAGIAWMCVVAAEM 196 >gi|323161797|gb|EFZ47677.1| inner membrane ABC transporter permease protein yehY domain protein [Escherichia coli E128010] Length = 279 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 109 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 168 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 169 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 204 >gi|320160309|ref|YP_004173533.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319994162|dbj|BAJ62933.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 282 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 +F M IPRDL + +R + WQ FW++ +P +PGL W M Sbjct: 160 SFWMRGFFSGIPRDLVDAARVDGCNDWQAFWHVMIPMVLPGL-WTM 204 >gi|285017487|ref|YP_003375198.1| binding-protein-dependent transport systems inner membrane component;substrate-binding region of ABC-type glycine betaine transport system [Xanthomonas albilineans GPE PC73] gi|283472705|emb|CBA15210.1| hypothetical binding-protein-dependent transport systems inner membrane component;substrate-binding region of abc-type glycine betaine transport system [Xanthomonas albilineans] Length = 496 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 8/95 (8%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 RLG L+ + ++Q++P L F + F IGA+ AI A+F + + + Sbjct: 329 RLGQALLALTGVLQTLPSLAVFVFMIPLFG-------IGAK-PAIAALFLYSLLPIVRNT 380 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + L I R+L E + + L + W + +P +M Sbjct: 381 HAGLTGIARELRETAAAIGLPASTRLWRIELPLAM 415 >gi|295698912|ref|YP_003606805.1| binding-protein-dependent transporters inner membrane component [Burkholderia sp. CCGE1002] gi|295438125|gb|ADG17294.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] Length = 288 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+ +L P +++IP L ++ +++ K+ L AI A F Q Sbjct: 115 SRRVDALLDPAFQALRAIPSLAWVPILLLWMGIDEAPKIT---LIAIGAFFPVQ-----L 166 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 S+ + + R L E RLS F + +P SMP + + +S W F+VA+E+ Sbjct: 167 SVVAGIRGVDRKLIEFGELNRLSRRALFTRILLPASMPQIFTGLRTGLSLAWMFMVAAEL 226 Query: 213 IVV 215 I Sbjct: 227 IAA 229 >gi|312109385|ref|YP_003987701.1| binding-protein-dependent transporters inner membrane component [Geobacillus sp. Y4.1MC1] gi|311214486|gb|ADP73090.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. Y4.1MC1] Length = 258 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 15/132 (11%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + + ++IP L + +++F +G E A IF + + + + Y + ++P+ Sbjct: 100 IQMFRNIPHLALIPIVILWFG-------VGEE-AKIFLVIIGVFFPIYINTYHGVISVPK 151 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 DL E+ + + LS W F + P ++P ++ + ++ W ++V +TV Sbjct: 152 DLIEMGKVYGLSKWILFSNVIFPSALPSILVGLRYALGVMWL------TLIVAETVAASS 205 Query: 224 GIGSYIALAIKE 235 GIG Y+A+ +E Sbjct: 206 GIG-YMAMNARE 216 >gi|114762783|ref|ZP_01442217.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Pelagibaca bermudensis HTCC2601] gi|114544693|gb|EAU47699.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Roseovarius sp. HTCC2601] Length = 278 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA ++ L PILD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 118 AAHRPKVYTYLRPILDLMQTLPTFVYLIPAIVFFGIGMVPGLI-----ATVIFVLPAPI- 171 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T Y + + P+ L E + +F + Q + + +P+++P GL +M+S+S Sbjct: 172 RLT---YLGVSSTPKALLEAATAFGATPTQTLYKVELPYAVPQIMAGLNQTIMLSLS 225 >gi|84685715|ref|ZP_01013612.1| hypothetical protein 1099457000253_RB2654_07079 [Maritimibacter alkaliphilus HTCC2654] gi|84666381|gb|EAQ12854.1| hypothetical protein RB2654_07079 [Rhodobacterales bacterium HTCC2654] Length = 276 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 10/128 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MN 125 +T +L A+ I++ F AA+ RRL V+ PILD MQ++P +L V+ F + Sbjct: 89 QTIALVLVAVTIAVGIAFPLGIYAARHRRLEAVVRPILDAMQTVPPWVYLIPAVIIFSLG 148 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P A+ A V M + +P DL+E+ ++ + + + Sbjct: 149 TVP---------AVIATIVYGVPPMLRLTTLAFRGVPTDLKELGQAIGAKPRTILFKIEL 199 Query: 186 PFSMPGLV 193 P + P LV Sbjct: 200 PAATPTLV 207 >gi|163746321|ref|ZP_02153679.1| taurine ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161380206|gb|EDQ04617.1| taurine ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 421 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV + +++ IP+G +G P + + P PLV+ Sbjct: 230 SLFRVVVGFALGALVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + +L+ W + +G S A S + + R++I+P P Sbjct: 290 VGK----IILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKAQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 >gi|325292826|ref|YP_004278690.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325060679|gb|ADY64370.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 258 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 25/221 (11%) Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 I I Q I ++ + Y+ V IT+ V+ +I + + + G+W+G P ++ Sbjct: 39 IDIVKQVITWVADAGFYKHV-------GITLSETVLGYLIGTGLGVGAGVWLGLSPFVAR 91 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI-LFNVIAGASAF 475 + PF + + A P V P+ V L LW + + +++ FN + G Sbjct: 92 VLDPFIKAVNAIPRVVLAPIFV-----LWLGLGLWSKVALAVTLVFFVTFFNAMQGVREV 146 Query: 476 PNDFKEVASSFHITGWR---WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 V S+ I G + R++ P + ++ T+ G A +I+ E Sbjct: 147 N---PVVLSNTRILGAKRSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLG---- 199 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + GLG IA S V G++I+ FVL ++ L Sbjct: 200 --SSAGLGYLIARSEGNFDAVGVFAGIIILAIFVLVIDLIL 238 >gi|306845830|ref|ZP_07478398.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO1] gi|306273722|gb|EFM55560.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO1] Length = 272 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 23/159 (14%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 G GIGSYI A DL L+A +T+L V+ L Sbjct: 221 GAQY----GIGSYILEAGSLYDLEK-LFAGVTILSVMGL 254 >gi|126649773|ref|ZP_01722009.1| hypothetical protein BB14905_16285 [Bacillus sp. B14905] gi|126593492|gb|EAZ87437.1| hypothetical protein BB14905_16285 [Bacillus sp. B14905] Length = 309 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 14/183 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS-- 442 +T+ V+ I +++ + I + + P +S + P+ +L A P P+++ + Sbjct: 74 VTLMETVIGFIAGTLLGTFIAILLWWSPFLSKVLDPYLVILNAMPKVALGPILIVALGPG 133 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 Y+ + L ++I Y F + PN + +V +F + W+ +R +ILP Sbjct: 134 YFSIIAMGALISIIITTIVVYTAFKGVD-----PN-YSKVLQTFGASRWQIFREVILPAS 187 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 FP ++ G +W IV G + + GLG I + +F V++ +LI+ Sbjct: 188 FPTIISTLKVNVGLSWVGVIV------GEFLVASKGLGYLIIYGFQVFNFNLVLMSLLII 241 Query: 563 CCF 565 F Sbjct: 242 AFF 244 >gi|237712167|ref|ZP_04542648.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229453488|gb|EEO59209.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 395 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135 VY + A R L P+++++ IP + GF V+ NL G+ + G+ Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSI 256 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + AI A+ T +T S ++ N PR + E S + + WQ + + +PFS+ G+ Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSISGITSG 311 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249 +++ + +A M+ VI PL I + IA + E Y L +L Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371 Query: 250 GVIFLYDQLL 259 GV+ + +L Sbjct: 372 GVVLFFITML 381 >gi|256826772|ref|YP_003150731.1| ABC-type nitrate/sulfonate/bicarbonate transporter permease [Cryptobacterium curtum DSM 15641] gi|256582915|gb|ACU94049.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Cryptobacterium curtum DSM 15641] Length = 394 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P LL P F +++ V L ++LS L++ I N++ G + Sbjct: 228 VEPIVSLLRTIPVVTFIIMLLIWVGNQALT--IYLSFLIVLP---LIYTNMLTGFESVDA 282 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E+A + ++ WR + Y+ P P+ + + G +W + I++EV Sbjct: 283 QMLEMARVYRLSRWRTFMYVYRPAFMPFLSSSCKISLGMSWKSGIMAEV 331 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 14/131 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI+ ++++IP++ F+ +++ +G + I+ F + + +M ++ Sbjct: 230 PIVSLLRTIPVVTFIIMLLIW---------VGNQALTIYLSFLIVLPLIYTNMLTGFESV 280 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + E++R +RLS W+ F Y+ P MP L + +S+ W + +E++ P Sbjct: 281 DAQMLEMARVYRLSRWRTFMYVYRPAFMPFLSSSCKISLGMSWKSGIMAEVLAT-----P 335 Query: 222 LPGIGSYIALA 232 P IG ++ A Sbjct: 336 KPSIGKEMSQA 346 >gi|255283058|ref|ZP_05347613.1| taurine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] gi|255266360|gb|EET59565.1| taurine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] Length = 267 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 17/180 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR + PI + ++ IP L ++ ++++F GK F IF +T Sbjct: 99 SRLAEAIFKPIFEFIRPIPPLAWIPLSILWFGLSDVGK--------FFIIFLGCFSFITV 150 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Y N+ +L +R + Q F+ + +P ++P + + ++++ GW VV +EM Sbjct: 151 NTYDGAKNVDPELIGAARMLGANERQIFFRIVLPSAVPYIFAGLQIAVTAGWSAVVGAEM 210 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269 I + G+G I + + + I+ ++ + V F+ L L R + W+ + Sbjct: 211 IQSNE------GVGWVIVRGMNTGNTVQIMVGIMAIGIVGFILANLTSALERRLCAWNEQ 264 >gi|288870382|ref|ZP_06113859.2| sn-glycerol-3-phosphate-binding protein [Clostridium hathewayi DSM 13479] gi|288867442|gb|EFC99740.1| sn-glycerol-3-phosphate-binding protein [Clostridium hathewayi DSM 13479] Length = 282 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 16/137 (11%) Query: 74 SAMVISLLF------TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 S+M++ LLF F K+ G+ ++ ++ Q I + FL F+ + +N Y Sbjct: 87 SSMILQLLFVVPAAYAFARCKFRGKTILFGITMMTLMIPGQLIFMPLFLIFSRMGLINSY 146 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 ++ +A F IF + QS IP +L E +R + S WQ ++ VP Sbjct: 147 ASMILPFSTSA-FGIFM---------LRQSFMQIPEELLEAARLDQASEWQIIRHIMVPM 196 Query: 188 SMPGLVWNMMMSMSGGW 204 + P +V M+++ W Sbjct: 197 ARPTIVTLMLLTFISRW 213 >gi|218681475|ref|ZP_03529362.1| putative sulfonate ABC transporter, permease protein (ssuC/ycbM-like) [Rhizobium etli CIAT 894] Length = 127 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%) Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 ++ + R + EV R FRLSG + + +P +P V + + GW FVVA+E Sbjct: 13 AVVGVDRRIVEVGRVFRLSGLELIRLILLPAVLPDYVLALRAGLGLGWMFVVAAE 67 >gi|184152831|ref|YP_001841172.1| glycine betaine/choline ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|183224175|dbj|BAG24692.1| glycine betaine/choline ABC transporter permease component [Lactobacillus reuteri JCM 1112] Length = 216 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%) Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQP-------FAQLLAAFPANVFFPLVVSCVSY 443 VV ++I+ II +P+G +I S+I+P FAQLL P+ L++ + Sbjct: 28 VVTLVISMIIALPLG-------YIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGT 80 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L +L + +L N I G + +KEV + + + R I +P Sbjct: 81 GVVPALIALIVLAL----PPLLINTILGFNEVSPLYKEVGIALGMDQRQLRRQIEIPLAL 136 Query: 504 PYYVTG-AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 PY + G + +A++ + + + G L TGLG Y G+ +L +L M Sbjct: 137 PYILNGIKLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVVIGAVSVAILSLLAM 196 Query: 563 CCFVLALNRFLWH 575 F + + H Sbjct: 197 ISFDFLIRKVQKH 209 >gi|85706087|ref|ZP_01037182.1| taurine ABC transporter, permease protein [Roseovarius sp. 217] gi|85669251|gb|EAQ24117.1| taurine ABC transporter, permease protein [Roseovarius sp. 217] Length = 420 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 15/148 (10%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV-----SC 440 ++FRV+V + +++ IP+G +G P + + P PLV+ + Sbjct: 230 SLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWQALAR 289 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + P +L+M + AG S A S + W+ R++I+P Sbjct: 290 AARSSCCPRG--ALIMTISAR--------AGVSGVAISKVHAAYSLGASKWQLMRHVIVP 339 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVAS 528 P TGA A G W + +E+ + Sbjct: 340 NSLPEIFTGARVAMGVCWGTVVAAELVA 367 >gi|148653178|ref|YP_001280271.1| glycine betaine ABC transporter substrate-binding protein [Psychrobacter sp. PRwf-1] gi|148572262|gb|ABQ94321.1| Substrate-binding region of ABC-type glycine betaine transport system [Psychrobacter sp. PRwf-1] Length = 652 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 27/173 (15%) Query: 70 LRMLSAMVISLLFTFV----YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 ++ ++ +++S++ T V L A S L V+ P+LD+MQ++P +L ++ F Sbjct: 450 VQTMALLIVSVIVTMVVGIPMGILMAGSSSLRKVVTPVLDVMQTMPSFVYLIPVLMLFG- 508 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 IG ++ A+FA + + + +P ++ E RSF + Q ++ + Sbjct: 509 ------IG-KVPALFATIIYALPPLIRLTMLGIKQVPHEMIEAGRSFGSNHKQLLIWIKL 561 Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 P ++P G+ +MMS+S +VV ++I PG+G + +I+ Sbjct: 562 PQALPSIMAGINQAVMMSLS-----------MVVLASMIGAPGLGEDVLQSIQ 603 >gi|50120464|ref|YP_049631.1| putative taurine transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49610990|emb|CAG74435.1| putative taurine transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 257 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 28/166 (16%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R + IA I+ +P+G+ +G P ++ PF Q L P PL V Sbjct: 63 AVSVARALSAFSIAIILGVPLGLLMGLSPPTAAVFNPFVQFLRPLPKIALIPLAV----- 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILF-----NVIAGASAFPNDFK----EVASSFHITGWRWW 494 +WL + ++++++F +V+ GA A + VA + + + + Sbjct: 118 ------VWLGIGE--ASKFFLIFIATFLSVVVGACAAVERVERSRIRVAQTLGASRRQIF 169 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +++LP P T A G W + I +E+ + T+G+G Sbjct: 170 FHVVLPDTLPELFTTVRLAIGIGWTSLIAAEMVA------ATSGIG 209 >gi|324113370|gb|EGC07345.1| inner membrane transport system [Escherichia fergusonii B253] Length = 236 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 11/196 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +I+LG +F V + A +I +P GI + RP + Q+ N PL V Sbjct: 39 LIYLGQQHLFLVFTSLFFALLIGVPSGILLS-RPAARGFAEHAMQIFNV--GNTLPPLAV 95 Query: 439 SCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 ++ L +++ +F + I+ N AG +A P KE A +T W+ + Sbjct: 96 LALAMIILGIGDTPAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLYLV 155 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 LP +P ++G A A+I+ A + + + G I FP ++L Sbjct: 156 ELPNAWPVMLSGIRIA------AAIIVGTAPLAFL-IGASSYGELIFPGIYLNDFPTLIL 208 Query: 558 GVLIMCCFVLALNRFL 573 G F L L+ L Sbjct: 209 GATATALFALILDSLL 224 >gi|291287979|ref|YP_003504795.1| binding-protein-dependent transport systems inner membrane component [Denitrovibrio acetiphilus DSM 12809] gi|290885139|gb|ADD68839.1| binding-protein-dependent transport systems inner membrane component [Denitrovibrio acetiphilus DSM 12809] Length = 245 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 24/189 (12%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 IT RV+ +++ S+ +GI+ G P I I+P ++L P V L + Sbjct: 57 ITAVRVISALVLGSVTGFILGIFAGKYPLIMQFIEPMRRVLTTIPGIVAAVLAM------ 110 Query: 445 HLNPNLWLSL---LMIFGTQWYIL----FNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LWL L ++IF +I+ NV + N + E+A + ++ + I Sbjct: 111 -----LWLGLGSAMVIFLNSMFIIPVVYINVAESINKCDNTYIEMADVYQLSTLSRIKNI 165 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P + + G + ++++EV G GLG + S + P + Sbjct: 166 YIPIVSSALSAALVLVTGNSMRMTVLAEVLGTGE------GLGFVLGISRARLDMPSLYG 219 Query: 558 GVLIMCCFV 566 VLI FV Sbjct: 220 CVLISFAFV 228 >gi|163857621|ref|YP_001631919.1| putative binding-protein-dependent transport protein [Bordetella petrii DSM 12804] gi|163261349|emb|CAP43651.1| putative binding-protein-dependent transport protein [Bordetella petrii] Length = 285 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 23/191 (12%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M+ A +S++ L A++ L +++P+LD+MQ++P +L V+ F GK+ Sbjct: 100 MIMAAGLSVIIGIPVGVLMARANWLRSIMLPLLDVMQTMPSFVYLIPVVMLF---GLGKI 156 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 AI A V + + + R++ E SR+F S Q+ + + +P ++P Sbjct: 157 -----PAIIATVIYAVPPLIRLTDLGIRLVDREVLEASRAFGASPRQQLFGVQLPLALPN 211 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 G+ MM++S V+AS +I G+G + L I ++ L A L Sbjct: 212 IMAGINQTTMMALS---MVVIAS--------MIGARGLGYEVLLGINRLEVGRGLLAGLG 260 Query: 248 MLGVIFLYDQL 258 ++ + L+D++ Sbjct: 261 IVVLAVLFDRI 271 >gi|186472444|ref|YP_001859786.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184194776|gb|ACC72740.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 292 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L ++ + F+ +LA S R+G L+ +L M +P + L +++F L G Sbjct: 99 LLRGYLLGVALAFLLTSLAV-STRIGRDLLSMLTAMFNPLPSIALLPLALLWF-GLGTGS 156 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + + +W + +MY +P L R++ L+G + VP ++P Sbjct: 157 LL-------FVLVHAVLWPLALNMYAGFRAVPATLRMAGRNYGLTGLHHVVLILVPAALP 209 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 210 SILAGLRVGWAFAWRTLIAAELV 232 >gi|89095405|ref|ZP_01168319.1| putative permease [Oceanospirillum sp. MED92] gi|89080343|gb|EAR59601.1| putative permease [Oceanospirillum sp. MED92] Length = 299 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 25/173 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R + P+LD+MQ++P +L V M L GK+ G I+AI ++ N Sbjct: 129 ARSDRAQAFVTPVLDVMQTMPAFVYLIPVV---MLLGIGKIPGVIAVIIYAIPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + + +D+ E + ++ S +Q+ + +P +MP G+ +MMS+S Sbjct: 186 LGIRL------VDKDVMEAATAYGASPFQRLTGVQLPLAMPTIMAGINQTIMMSLS---- 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M+V+ ++I + G+G + +I Q L L ++ + ++D++ Sbjct: 236 ------MVVIA-SMIGVKGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRV 281 >gi|300310979|ref|YP_003775071.1| alkanesulfonates ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073764|gb|ADJ63163.1| ABC-type alkanesulfonates transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + + N G + E+ Sbjct: 124 QMVRNIPALALIPLVIL---WFGIDETAKLFLVSV-GVFFPVYLNTFHGIRSVDQGLIEM 179 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S+ ++GW +R +ILPG P + G A G W IV+E S G+G Sbjct: 180 AKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWVLLIVAETIS------AQAGIGYM 233 Query: 543 IAESTEKGSFPEVVLGVLIMCCF-VLA------LNRF--LWHPLY 578 + E V++G+L+ LA L RF WHP Y Sbjct: 234 TMNAREFLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHPGY 278 >gi|258545018|ref|ZP_05705252.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258519744|gb|EEV88603.1| sulfonate ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 264 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 16/156 (10%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+P++ + +P + L +V+F G G+++A I ++ + Y ++ Sbjct: 107 LLPLVSALFPVPKIALLPLFLVWF-----GIDEGSKVATIL---IGTLFPTVIATYAAVD 158 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 N+ R+L + +SF L + +P +MPG+ +S+S +A M+VV + + Sbjct: 159 NVDRNLIRMGQSFGLPPAAIVRKIILPGAMPGIFAGFRISIS------IAITMLVVAEMM 212 Query: 220 IPLPGIGSYIALAIK--EQDLLAILYAMLTMLGVIF 253 G+G+YIA A + + D L +L +LG++ Sbjct: 213 NADRGVGAYIAAAGQLYQMDQLLAGVTLLALLGIVL 248 >gi|329960796|ref|ZP_08299102.1| phosphate ABC transporter, permease protein PstC [Bacteroides fluxus YIT 12057] gi|328532397|gb|EGF59198.1| phosphate ABC transporter, permease protein PstC [Bacteroides fluxus YIT 12057] Length = 394 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 12/197 (6%) Query: 75 AMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYP 128 A++I+L F A ++ + ++ ++ P+++++ IP + GF V+ + + Sbjct: 185 AILIALPFGLAVAIYMSEVANPKIRNLMKPVIELLSGIPSVVYGFFGLIVIVPFIQKAFD 244 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 V + LA + + + ++ N PR + E S + S WQ + + +P+S Sbjct: 245 LPVGESGLAGSIVLAIMALPTIITVTEDAMRNCPRAMREASLALGASQWQTIYKVVIPYS 304 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAIL 242 + G+ +++ + +A M+ VI PL I + IA + E Sbjct: 305 ISGITSGVVLGIGRAVGETMAVLMVTGNAAVIPHTILEPLRTIPATIAAELGEAPAGGPH 364 Query: 243 YAMLTMLGVIFLYDQLL 259 Y L +LGV+ + LL Sbjct: 365 YEALFLLGVVLFFISLL 381 >gi|291484944|dbj|BAI86019.1| phosphate ABC transporter, permease [Bacillus subtilis subsp. natto BEST195] Length = 309 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154 VL P+++++ IP + GF+ TV V F+ + G L A + + + +T Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSVMILPTITSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ ++P+ L E S + + WQ + VP + P L+ +++ M+ + +A +M++ Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 V+P Sbjct: 245 GNTRVLP 251 >gi|256829627|ref|YP_003158355.1| binding-protein-dependent transport systems inner membrane component [Desulfomicrobium baculatum DSM 4028] gi|256578803|gb|ACU89939.1| binding-protein-dependent transport systems inner membrane component [Desulfomicrobium baculatum DSM 4028] Length = 283 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 26/49 (53%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 M +Y +L + R E +R S W+ FW + VP +MPG+V M+ Sbjct: 165 MILPLYAALERLDRRYLEAARDLGASPWRAFWKVVVPLTMPGIVSGCML 213 >gi|239624587|ref|ZP_04667618.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520973|gb|EEQ60839.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 273 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCN 160 PI ++++ IP + ++ ++ V+G LA F IF + + + Y + Sbjct: 116 PIFELIRPIPAIAWIPLIIL---------VLGIGNLAKSFIIFFAAFVPIVINSYTGIRQ 166 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + SR+ S W F +GVP S+P + +S+ W +VA+EM+ Sbjct: 167 VNKTYVNFSRTCGASNWTIFLKVGVPSSLPMIFGGYKVSLGNAWSTLVAAEML 219 >gi|221310422|ref|ZP_03592269.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|221314745|ref|ZP_03596550.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319668|ref|ZP_03600962.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. JH642] gi|221323945|ref|ZP_03605239.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. SMY] gi|255767565|ref|NP_390377.2| phosphate ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|251757386|sp|P46339|YQGH_BACSU RecName: Full=Probable ABC transporter permease protein yqgH gi|225185193|emb|CAB14428.2| phosphate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] Length = 309 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154 VL P+++++ IP + GF+ TV V F+ + G L A + + + +T Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSVMILPTITSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ ++P+ L E S + + WQ + VP + P L+ +++ M+ + +A +M++ Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 V+P Sbjct: 245 GNTRVLP 251 >gi|212691391|ref|ZP_03299519.1| hypothetical protein BACDOR_00883 [Bacteroides dorei DSM 17855] gi|212666001|gb|EEB26573.1| hypothetical protein BACDOR_00883 [Bacteroides dorei DSM 17855] Length = 395 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135 VY + A R L P+++++ IP + GF V+ NL G+ + G+ Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSI 256 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + AI A+ T +T S ++ N PR + E S + + WQ + + +PFS+ G+ Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSISGITSG 311 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249 +++ + +A M+ VI PL I + IA + E Y L +L Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371 Query: 250 GVIFLYDQLL 259 GV+ + +L Sbjct: 372 GVVLFFITML 381 >gi|158424268|ref|YP_001525560.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331157|dbj|BAF88642.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 291 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 6/161 (3%) Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 S ++ +L+ PA PL + ++ L N L +++ W + N +G A Sbjct: 123 SDFLETVTAMLSPLPAIALLPL---ALIWFGLG-NGSLVFILVHSVLWPVALNTHSGFRA 178 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 + V ++ + G+ + R I++P FP +TG AW + +E+ + Sbjct: 179 VSQTLRMVGRNYGLKGFAYIRKILIPAAFPSILTGLKIGWAFAWRTLVAAELVF--GVSS 236 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 GLG +I E+ P V G+L + L + ++ Sbjct: 237 GQGGLGWFIFENRNLLEIPAVFAGLLTVILIGLVVENVIFR 277 >gi|159037257|ref|YP_001536510.1| binding-protein-dependent transport systems inner membrane component [Salinispora arenicola CNS-205] gi|157916092|gb|ABV97519.1| binding-protein-dependent transport systems inner membrane component [Salinispora arenicola CNS-205] Length = 663 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 15/176 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T L A+ +SLLF LA S R ++ P+LD+MQ++P +L + Sbjct: 149 QESMDTLALTLVAVFVSLLFGIPLGILAGLSDRFHRLITPVLDLMQTMPTFVYLAPLTLV 208 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F+ IG A I + + + + + + ++P E + SF + Q+ Sbjct: 209 FL-------IGPASATIATLIYAMPPAIRITAH-GIRSVPAPPVEATDSFGATRRQRLTK 260 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P S +V + + ++A+ +V +I PG+G + A++ D+ Sbjct: 261 ALLPLSKRTIVLGVNQT-------IMAALAMVTVAALIDAPGLGKTVIKALQTTDV 309 >gi|70733713|ref|YP_257353.1| aliphatic sulfonates ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348012|gb|AAY95618.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 531 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 16/157 (10%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR +L P L ++ I I ++ +F K + LAA F +F Sbjct: 365 SRFSERLLGPTLAAIRQIAIFAWVPLLTAWFGLGELAKWVFVALAAFFPLF--------I 416 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + +S+ + L E ++ RL+ WQ+ L +P + PG+ + +S+ W + +E Sbjct: 417 ATQRSVAQLSPQLAEAAQVLRLNLWQRLRRLVLPGAAPGIFAGLRISLIYAWLGTIGAEY 476 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 + + GIGS + I Q LL + M ML Sbjct: 477 FMPSNG-----GIGSQM---ISAQQLLRMDLIMAGML 505 >gi|313765505|gb|EFS36869.1| ABC transporter, permease protein [Propionibacterium acnes HL013PA1] gi|313815094|gb|EFS52808.1| ABC transporter, permease protein [Propionibacterium acnes HL059PA1] gi|314917130|gb|EFS80961.1| ABC transporter, permease protein [Propionibacterium acnes HL050PA1] gi|314921405|gb|EFS85236.1| ABC transporter, permease protein [Propionibacterium acnes HL050PA3] gi|314954904|gb|EFS99310.1| ABC transporter, permease protein [Propionibacterium acnes HL027PA1] gi|314958837|gb|EFT02939.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA1] gi|315099895|gb|EFT71871.1| ABC transporter, permease protein [Propionibacterium acnes HL059PA2] gi|315101794|gb|EFT73770.1| ABC transporter, permease protein [Propionibacterium acnes HL046PA1] gi|327454672|gb|EGF01327.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA3] gi|327456746|gb|EGF03401.1| ABC transporter, permease protein [Propionibacterium acnes HL083PA2] gi|328755728|gb|EGF69344.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA1] gi|328756507|gb|EGF70123.1| ABC transporter, permease protein [Propionibacterium acnes HL025PA2] Length = 296 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 F M QS ++P +LEE +R + WQ FW + VP PGL M+ ++ W Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227 >gi|222080847|ref|YP_002540210.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84] gi|221725526|gb|ACM28615.1| taurine uptake ABC transporter [Agrobacterium radiobacter K84] Length = 285 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 20/167 (11%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI-FAIFTSQVWNMTFSMYQSL 158 LVP++ + IP + L V++F G ++ A I F FT V + Y ++ Sbjct: 128 LVPLVAALFPIPKIALLPLFVIWF-----GIDETSKYALIAFGTFTPTV----VATYGAV 178 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ G Sbjct: 179 DNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML--GAQ 236 Query: 219 VIPLPGIGSYIALAIKEQDLLAILY--AMLTMLGVI--FLYDQLLFR 261 G+G+YI A DL + A+L+M+G+I F+ Q+ R Sbjct: 237 F----GVGAYILEAGSLYDLEKLFTGVAILSMMGLIVNFVIGQIERR 279 >gi|190893121|ref|YP_001979663.1| nitrate/sulfonate ABC transporter permease [Rhizobium etli CIAT 652] gi|190698400|gb|ACE92485.1| probable nitrate/sulfonate ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 375 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +I L F+ A LA + L L+PI +++ ++PI+G V++F +P K + Sbjct: 189 IIGCLSGFIVAVLADRVAFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWPSKAAVVII 248 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 F + + V + S ++ RDL R++ S WQ L +P +MP Sbjct: 249 MTFFPMLVNTVAGLAAS-----GSMERDLM---RTYASSDWQTLLKLKLPAAMP 294 >gi|50841883|ref|YP_055110.1| putative transport system permease protein [Propionibacterium acnes KPA171202] gi|50839485|gb|AAT82152.1| putative transport system permease protein [Propionibacterium acnes KPA171202] Length = 293 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 F M QS ++P +LEE +R + WQ FW + VP PGL M+ ++ W Sbjct: 172 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 224 >gi|332716874|ref|YP_004444340.1| aliphatic sulfonate ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gi|325063559|gb|ADY67249.1| aliphatic sulfonate ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 259 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ P PLV+ ++ ++ L L+ G + I N + G E+ Sbjct: 102 QMIRNIPHLALIPLVIL---WFGIDEEAKL-FLVALGVFFPIYINTLLGIQGVDPQLVEM 157 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 ++ ++ + +R +ILPG P TG A G W IV+E S ++GLG Sbjct: 158 GRTYGMSSFTLFRRVILPGALPSIFTGLRYALGIMWLTLIVAETIS------SSSGLGYM 211 Query: 543 IAESTEKGSFPEVVLGVLI---MCCFVLALNRFL------WHPLY 578 ++ E VVL +LI + + RFL WHP + Sbjct: 212 AMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQWHPAF 256 >gi|313905553|ref|ZP_07838916.1| binding-protein-dependent transport systems inner membrane component [Eubacterium cellulosolvens 6] gi|313469616|gb|EFR64955.1| binding-protein-dependent transport systems inner membrane component [Eubacterium cellulosolvens 6] Length = 251 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 36/184 (19%), Positives = 85/184 (46%), Gaps = 10/184 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + +R+++ I+ + +PVG+ +G + + LL P VF P++V + Sbjct: 56 SFYRIILGTILGLLFSVPVGLLLGTKKKVDHVAGQLFNLLYPIPKVVFLPVIVVVMGIGD 115 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L P ++L L++F + + + A P+ + S + ++ R++++PG P Sbjct: 116 L-PKIFLIALVLF---FQLTIVIRDSAKKLPDTLYDSMKSLDASELQFLRHLVIPGCMPD 171 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +T ++ G + ++E + T+G+G +I +S + + + GV+ + Sbjct: 172 ILTSVRSSIGISTAMLFITENFA------ATSGIGYFITKSMDARDYERMYAGVIALGVL 225 Query: 566 VLAL 569 ++L Sbjct: 226 GVSL 229 >gi|290963193|ref|YP_003494375.1| hypothetical protein SCAB_89171 [Streptomyces scabiei 87.22] gi|260652719|emb|CBG75852.1| putative binding protein dependent transport protein [Streptomyces scabiei 87.22] Length = 304 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%) Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 MY +L NIPRD+ E + WQ W++ +P +V+ ++++ +GG Sbjct: 186 MYGALNNIPRDVMEAAHIDGAGAWQTAWHVQIPMLRKWIVYMVILAFAGG 235 >gi|903304|dbj|BAA09582.1| ORF72 [Bacillus subtilis] gi|1303855|dbj|BAA12511.1| YqgH [Bacillus subtilis] Length = 309 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154 VL P+++++ IP + GF+ TV V F+ + G L A + + + +T Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSVMILPTITSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ ++P+ L E S + + WQ + VP + P L+ +++ M+ + +A +M++ Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 V+P Sbjct: 245 GNTRVLP 251 >gi|321311982|ref|YP_004204269.1| phosphate ABC transporter permease [Bacillus subtilis BSn5] gi|320018256|gb|ADV93242.1| phosphate ABC transporter permease [Bacillus subtilis BSn5] Length = 309 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154 VL P+++++ IP + GF+ TV V F+ + G L A + + + +T Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSVMILPTITSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ ++P+ L E S + + WQ + VP + P L+ +++ M+ + +A +M++ Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 V+P Sbjct: 245 GNTRVLP 251 >gi|229490049|ref|ZP_04383902.1| ABC transporter, permease component [Rhodococcus erythropolis SK121] gi|229323150|gb|EEN88918.1| ABC transporter, permease component [Rhodococcus erythropolis SK121] Length = 267 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKV 131 L +SL+ ++ A + S L LVP+ + Q++PI+ +++F L P KV Sbjct: 77 LVGFTVSLVLAWILAVVVDFSPWLSRALVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KV 135 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + LA F MT + + R+ + RS + WQ+F Y+ +P ++P Sbjct: 136 LVIALATFFP--------MTIGLIEGFAAADREAGALLRSMGSTRWQEFRYVRLPSAIP 186 >gi|226307497|ref|YP_002767457.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226186614|dbj|BAH34718.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 259 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKV 131 L +SL+ ++ A + S L LVP+ + Q++PI+ +++F L P KV Sbjct: 69 LVGFTVSLVLAWILAVVVDFSPWLSRALVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KV 127 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + LA F MT + + R+ + RS + WQ+F Y+ +P ++P Sbjct: 128 LVIALATFFP--------MTIGLIEGFAAADREAGALLRSMGSTRWQEFRYVRLPSAIP 178 >gi|114768906|ref|ZP_01446532.1| Glycine betaine/L-proline transport system permease protein [alpha proteobacterium HTCC2255] gi|114549823|gb|EAU52704.1| Glycine betaine/L-proline transport system permease protein [alpha proteobacterium HTCC2255] Length = 512 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+G++ R S IQP + PA VF ++ ++++ + MIF Sbjct: 344 VIGIPLGMFCARRRRFYSFIQPIMDFMQTMPAFVF---MIPVIAFFGTGKPAAVVTTMIF 400 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G + V+ G P+ +E A SF W + LP P G Sbjct: 401 GGTPVVRLTVL-GLRGVPDSVREAAISFGANKWYLLTKVDLPLASPSIRAG 450 >gi|73538712|ref|YP_299079.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gi|72122049|gb|AAZ64235.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 296 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 20/171 (11%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R + +L P+ D ++ +P + F+ +V+ G GA++A IF + M Sbjct: 130 RTVQALLEPLTDFIRYMPAVAFIPLVMVWV-----GIDEGAKVAIIF---IGTFFQMVLM 181 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + + +P E +++ + + ++ VP + P L+ + ++M W ++V +E++ Sbjct: 182 VAEDVRRVPMAQVEAAQTMGATRGEIIQHVIVPSAKPALLDTLRVTMGWAWTYLVVAELV 241 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAI--LYAMLTMLGVIFLY-DQLLFR 261 G G+G I +K Q L ++A + ++GVI L DQ + R Sbjct: 242 AAGS------GLGFAI---LKAQRFLQTDKIFAGILLIGVIGLAIDQFMRR 283 >gi|23009762|ref|ZP_00050690.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 126 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 6/112 (5%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W I+ N G P D++ VA+ + ++ I+LP PY TG G +W A Sbjct: 7 WPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIMLPSAAPYIFTGLRIGVGLSWLAI 66 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ G G+G +I ++ E+++ ++ + L+R + Sbjct: 67 VAAEMLIGG------VGIGFFIWDAWNSSHISEIIVALVYVGLIGFVLDRLV 112 >gi|300022986|ref|YP_003755597.1| binding-protein-dependent transporters inner membrane component [Hyphomicrobium denitrificans ATCC 51888] gi|299524807|gb|ADJ23276.1| binding-protein-dependent transport systems inner membrane component [Hyphomicrobium denitrificans ATCC 51888] Length = 269 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/129 (20%), Positives = 62/129 (48%), Gaps = 6/129 (4%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 ++AAI A+ +++ N+ +M + ++ +DL E++ ++ W+ ++ +P P Sbjct: 138 DVAAIVAVALNKIPNVAVNMREGARSLSKDLAEMAAMYKFGSWKTLRHVTLPQLAPFFAA 197 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 +S W V+ E + G+G +A+A +E D+ IL L + ++ + Sbjct: 198 AARSGLSLVWKIVLVVEAFGRSN------GVGYRLAIAFQEFDVGTILAYALAFILIVQI 251 Query: 255 YDQLLFRPM 263 + + +P+ Sbjct: 252 IEFTILQPL 260 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N+ GA + D E+A+ + W+ R++ LP + P++ A + W IV V Sbjct: 156 NMREGARSLSKDLAEMAAMYKFGSWKTLRHVTLPQLAPFFAAAARSGLSLVWK--IVLVV 213 Query: 527 ASWGHIHLRTTGLGAYIA 544 ++G R+ G+G +A Sbjct: 214 EAFG----RSNGVGYRLA 227 >gi|161520059|ref|YP_001583486.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189353760|ref|YP_001949387.1| osmoprotectant transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160344109|gb|ABX17194.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189337782|dbj|BAG46851.1| osmoprotectant transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 263 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 14/115 (12%) Query: 91 AKSRRLGMVLVP----ILDIMQSIPILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTS 145 A +R G +P I+DI Q+ P + L V L P +I L + +F S Sbjct: 94 AVTRPFGADFLPVARSIVDIGQTFPPVAVLALAVPAVGFGLKP-VLIALVLYGLLPVFES 152 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 + L ++PRD+ E +R +SGWQ+ + +P + P +V + +++ Sbjct: 153 TIAG--------LEDVPRDVIEAARGMGMSGWQRLMSVELPLAFPVIVNGIRLAV 199 >gi|327191933|gb|EGE58917.1| putative nitrate/sulfonate ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 375 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +I L F+ A LA + L L+PI +++ ++PI+G V++F +P K + Sbjct: 189 IIGCLSGFIVAVLADRVAFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWPSKAAVVII 248 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 F + + V + S ++ RDL R++ S WQ L +P +MP Sbjct: 249 MTFFPMLVNTVAGLAAS-----GSMERDLM---RTYASSDWQTLLKLKLPAAMP 294 >gi|126725657|ref|ZP_01741499.1| glycine betaine/proline ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] gi|126704861|gb|EBA03952.1| glycine betaine/proline ABC transporter, permease protein [Rhodobacterales bacterium HTCC2150] Length = 342 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/152 (20%), Positives = 76/152 (50%), Gaps = 22/152 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 +KS RL +VPILD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 174 SKSDRLQRSVVPILDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLTDL 232 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + + +D+ E + +F ++ Q+ + +P ++P G+ +MMS++ Sbjct: 233 GIRL------VDKDVIEAANAFGMTSRQRLTGVELPLALPNIMAGINQTIMMSLA----- 281 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 282 -----MVVIA-SLVSAPGLGVNVLRGIRNLEL 307 >gi|152986181|ref|YP_001351473.1| choline ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150961339|gb|ABR83364.1| choline ABC transporter, permease protein [Pseudomonas aeruginosa PA7] Length = 279 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L P+LD+MQ++P +L T+ F + + PG + IFA+ + +T Q Sbjct: 127 LRPLLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVIFAV--AAPIRLTCLGIQ-- 178 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIV 214 ++P +L + ++F S WQ + +P +MP G+ +M+S+S M+V Sbjct: 179 -DVPAELLDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQCIMLSLS----------MVV 227 Query: 215 VGDTVIPLPGIGSYIALAIKEQDL 238 + ++ G+G + A+ D+ Sbjct: 228 IA-ALVGADGLGKPVVNALNTADI 250 >gi|148257245|ref|YP_001241830.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409418|gb|ABQ37924.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 255 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++AS+ I +G IG + + P +LL P + P+ ++ + LN ++ L Sbjct: 72 LLASVAGIALGAMIGSSKAMRIYVAPTLELLRPLPVSAIIPVAIAA---FGLNQSMAL-F 127 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 ++ FG+ W +L I G +A EVA H++ I LP P + G Sbjct: 128 VIAFGSLWPMLLGTIHGFAAVEPRLYEVARVLHMSRLAVIFKIALPSAAPDILAG 182 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 23/165 (13%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNM 150 S+ + + + P L++++ +P+ + + F +N + A+F I +W M Sbjct: 87 SSKAMRIYVAPTLELLRPLPVSAIIPVAIAAFGLN---------QSMALFVIAFGSLWPM 137 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + L EV+R +S + + +P + P ++ M +S++ V Sbjct: 138 LLGTIHGFAAVEPRLYEVARVLHMSRLAVIFKIALPSAAPDILAGMRLSLTVALILAVVC 197 Query: 211 EMIVVGDTVIPLPGIGSYI---ALAIKEQDLLAILYAMLTMLGVI 252 EM+ L G+G ++ A A + D L+A + +LG+I Sbjct: 198 EMLA------GLDGLGQWVLLSARAFRSAD----LFAGVMLLGII 232 >gi|307260742|ref|ZP_07542431.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869581|gb|EFN01369.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 288 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P IG+ I + A+ A+ Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288 >gi|223934499|ref|ZP_03626420.1| binding-protein-dependent transport systems inner membrane component [bacterium Ellin514] gi|223896962|gb|EEF63402.1| binding-protein-dependent transport systems inner membrane component [bacterium Ellin514] Length = 348 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 5/139 (3%) Query: 389 RVVVL-IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 R +VL +++S++ +P+GI G + +PF + PA F L V+ + Sbjct: 129 RTIVLGFLVSSLLGVPLGILCGTYRFFAKLQEPFIEFFRYLPAPAFGALCVAVLGIDD-P 187 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 P + + ++ F Q I+ N + E A + +GW+ R II+P Sbjct: 188 PKVAIIVIGTFFQQVLIIANTVRKVDP---ALLEAAQTLGASGWKLVRRIIIPAAITDIY 244 Query: 508 TGAITACGGAWNASIVSEV 526 T G AW IV+EV Sbjct: 245 TDMRILLGWAWTYLIVAEV 263 >gi|297583598|ref|YP_003699378.1| binding-protein-dependent transporter inner membrane component [Bacillus selenitireducens MLS10] gi|297142055|gb|ADH98812.1| binding-protein-dependent transport systems inner membrane component [Bacillus selenitireducens MLS10] Length = 255 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 8/110 (7%) Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 +QS+P + +L +V F G E A F + W MT +M + N+ L Sbjct: 98 LQSVPSIVWLPLALVMFQ--------GGEGAIYFVVILGGTWAMTMNMRMGIKNVSPILI 149 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 +++ S + W + +P S+P ++ ++ + GW ++A+E+I G Sbjct: 150 RAAKTMGYSQTEIVWKVMLPASVPSILTGARLAWAFGWRALMAAELIGRG 199 >gi|149181502|ref|ZP_01859997.1| ABC-type sugar transport system, permease component [Bacillus sp. SG-1] gi|148850752|gb|EDL64907.1| ABC-type sugar transport system, permease component [Bacillus sp. SG-1] Length = 293 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 132 IGAELAAIFAIFTSQVWNMTFSMY----QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 +G + AIF+I QVW T M L NIP DL EV++ S WQ+F ++ P Sbjct: 150 LGDQDIAIFSIAVVQVWMHTGQMLIIFVAGLQNIPNDLYEVAKIEGASRWQRFRFVTWPL 209 Query: 188 SMPG 191 P Sbjct: 210 VAPA 213 >gi|320184840|gb|EFW59630.1| Osmoprotectant ABC transporter permease protein YehY [Shigella flexneri CDC 796-83] Length = 333 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 163 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 222 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 223 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 258 >gi|229587775|ref|YP_002869894.1| putative ABC sulfur transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359641|emb|CAY46484.1| putative ABC sulfur transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 530 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 16/157 (10%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR VL P L ++ I I ++ +F K + LAA F +F Sbjct: 364 SRRSERVLGPTLSALRQIAIFAWVPLLTAWFGLGELAKWVFIALAAFFPLF--------I 415 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + +S+ N+ L E ++ RL+ +Q+ L +P + G+ + +S+ W + +E Sbjct: 416 ATQRSVLNLSPQLNEAAQVLRLNLFQRLRRLVLPGAAAGIFAGLRLSLIYAWLGTIGAEY 475 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 + + GIGS L I Q LL + M ML Sbjct: 476 FMPSNG-----GIGS---LMIGAQQLLRMDLIMSGML 504 >gi|313117408|ref|YP_004044391.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Halogeometricum borinquense DSM 11551] gi|312294299|gb|ADQ68730.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Halogeometricum borinquense DSM 11551] Length = 281 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 23/219 (10%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASR---TTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 TT P + P+T LP+ +R T+L ++ ++ + + R Sbjct: 67 TTAPLSL----PVTGGTVELPRAMTRLAQTSLHLVPGLLAGAFVGNGAGLVIGYATRADA 122 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P++ +++ IP L ++ F +V+F + G A F + +W ++ Y + Sbjct: 123 IATPVVRVLRPIPELAWIAFAIVWFGIGHTG--------ATFIVAIGALWINYYAAYSGV 174 Query: 159 CNIPRDLEEVSRSFRL-SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +EV+ S + + Y+ +P + P +V S+ MIVVG Sbjct: 175 RGVRDGYKEVAASLGIRTHVGMLRYVILPAASPAIVNGFRTSIG-------RCLMIVVGA 227 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + PG+G I A D+ + ML + V D Sbjct: 228 ELFGAPGVGYEILNASNNLDMARSMAYMLLISAVYICVD 266 >gi|171316825|ref|ZP_02906035.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] gi|171097995|gb|EDT42812.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] Length = 255 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%) Query: 69 TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121 TL L + +S L + A A A +R G +P+ +DI Q+ P + L V Sbjct: 62 TLAHLGTVALSSLIGMLVAIAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPA 121 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 L P +I L + IF S + L ++PRD+ + +R +SGWQ+ Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172 Query: 182 YLGVPFSMPGLVWNMMMSM 200 + +P + P +V + +++ Sbjct: 173 SVELPLAFPVIVNGIRLAV 191 >gi|165975737|ref|YP_001651330.1| spermidine/putrescine ABC transporter membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875838|gb|ABY68886.1| spermidine/putrescine transport system permease protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 288 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P IG+ I + A+ A+ Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNVIKSLFLNTNQFALGSAV 259 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288 >gi|157692992|ref|YP_001487454.1| phosphate ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|194017756|ref|ZP_03056366.1| phosphate ABC transporter, permease protein PstA [Bacillus pumilus ATCC 7061] gi|157681750|gb|ABV62894.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] gi|194010656|gb|EDW20228.1| phosphate ABC transporter, permease protein PstA [Bacillus pumilus ATCC 7061] Length = 294 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 23/40 (57%) Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 P D KE + + +T W + +++PG P +TGAI A G Sbjct: 160 PKDQKEASLALGVTKWHTVKTVLIPGALPSIITGAILASG 199 >gi|152988829|ref|YP_001345661.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150963987|gb|ABR86012.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 538 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 13/128 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P ++ + I ++ +F P K+ LAA F + + + + ++ Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLAFVALAAFFPLL--------LATQRGIASL 432 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L E +R RL W++ L +P + P + + +++ W + +E + D Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLALPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSDG--- 489 Query: 222 LPGIGSYI 229 GIGS + Sbjct: 490 --GIGSLM 495 >gi|150006420|ref|YP_001301164.1| putative ABC transporter permease protein [Bacteroides vulgatus ATCC 8482] gi|294777060|ref|ZP_06742518.1| phosphate ABC transporter, permease protein PstC [Bacteroides vulgatus PC510] gi|149934844|gb|ABR41542.1| putative ABC transporter permease protein [Bacteroides vulgatus ATCC 8482] gi|294449118|gb|EFG17660.1| phosphate ABC transporter, permease protein PstC [Bacteroides vulgatus PC510] Length = 395 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135 VY + A R L P+++++ IP + GF V+ NL G+ + G+ Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSI 256 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + AI A+ T +T S ++ N PR + E S + + WQ + + +PFS+ G+ Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSVSGITSG 311 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249 +++ + +A M+ VI PL I + IA + E Y L +L Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371 Query: 250 GVIFLYDQLL 259 GV+ + +L Sbjct: 372 GVVLFFITML 381 >gi|307245096|ref|ZP_07527189.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254051|ref|ZP_07535898.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258507|ref|ZP_07540244.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853985|gb|EFM86197.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862976|gb|EFM94923.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867411|gb|EFM99262.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 288 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P IG+ I + A+ A+ Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288 >gi|289424749|ref|ZP_06426532.1| ABC transporter, permease protein [Propionibacterium acnes SK187] gi|289155446|gb|EFD04128.1| ABC transporter, permease protein [Propionibacterium acnes SK187] gi|313814415|gb|EFS52129.1| ABC transporter, permease protein [Propionibacterium acnes HL025PA1] gi|313828616|gb|EFS66330.1| ABC transporter, permease protein [Propionibacterium acnes HL063PA2] gi|315106454|gb|EFT78430.1| ABC transporter, permease protein [Propionibacterium acnes HL030PA1] gi|315110248|gb|EFT82224.1| ABC transporter, permease protein [Propionibacterium acnes HL030PA2] gi|327334982|gb|EGE76693.1| ABC transporter, permease protein [Propionibacterium acnes HL097PA1] Length = 296 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 F M QS ++P +LEE +R + WQ FW + VP PGL M+ ++ W Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227 >gi|315647776|ref|ZP_07900877.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] gi|315276422|gb|EFU39765.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] Length = 286 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 11/168 (6%) Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+GF + P Q+L P PL + + + LL+ G+ + + Sbjct: 109 IWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFGFGETSK----ILLIAKGSFFPLY 164 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N G + N +VA + W R +I+P P G + G AW +V+E Sbjct: 165 VNTFLGIRSVDNRLFDVARVLQFSRWDLIRRLIVPASLPNIFLGIRLSIGVAWLGLVVAE 224 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + ++G+G YI S+ VV +I+ V L+ L Sbjct: 225 LMG------SSSGIG-YIINDARSFSWTTVVFVGIIVFALVGKLSDSL 265 >gi|314915854|gb|EFS79685.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA4] Length = 296 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 F M QS ++P +LEE +R + WQ FW + VP PGL M+ ++ W Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227 >gi|295400979|ref|ZP_06810954.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] gi|294976981|gb|EFG52584.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] Length = 258 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 15/132 (11%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + + ++IP L + +++F +G E A IF + + + + Y + ++P+ Sbjct: 100 IQMFRNIPHLSLIPIVILWFG-------VGEE-AKIFLVIIGVFFPIYINTYHGVISVPK 151 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 DL E+ + + LS W F + P ++P ++ + ++ W ++V +TV Sbjct: 152 DLIEMGKVYGLSKWILFSNVIFPSALPSILVGLRYALGVMWL------TLIVAETVAASS 205 Query: 224 GIGSYIALAIKE 235 GIG Y+A+ +E Sbjct: 206 GIG-YMAMNARE 216 >gi|254820641|ref|ZP_05225642.1| putative ABC transporter transmembrane subunit [Mycobacterium intracellulare ATCC 13950] Length = 263 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 7/186 (3%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ITM R + +A +I VG I + + P L PA +FP + ++ Sbjct: 63 ITMCRALAGFALALLIGSVVGAVIAQNRLLRTAFGPVITGLQTMPAIAWFPF---AIIFF 119 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ + L +++ G + V+AGA P VA + + G+ +R++ILP P Sbjct: 120 GLHTSAIL-FVVVIGAAPSVATGVLAGAGQIPPLQLRVAKNLGLHGFGLYRHVILPASLP 178 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +V G AW + + E+ + T +G + S P + ++++ Sbjct: 179 MFVAGLRQGWAFAWRSLMAGELVV---LISDTASIGVLLENSQNLSDMPSAIAIMIVILL 235 Query: 565 FVLALN 570 +A++ Sbjct: 236 IGIAID 241 >gi|269839255|ref|YP_003323947.1| binding-protein-dependent transporters inner membrane component [Thermobaculum terrenum ATCC BAA-798] gi|269790985|gb|ACZ43125.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] Length = 259 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 23/185 (12%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 S L +L L ++++IP L + +++F GK+ +F ++ + Sbjct: 90 SSTLSRLLDSTLQMIRNIPHLALIPLVILWFGIGEQGKLFLVAEGVLFPVYVNT------ 143 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 Y + N+ L E+ + + LS W+ F + +P ++P ++ + ++ W Sbjct: 144 --YHGIRNVDSGLLEMGQVYGLSRWEVFRDIVLPGALPSILVGVRYALGVMWL------T 195 Query: 213 IVVGDTVIPLPGIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVW 266 ++V +T+ GIG YI + +E D+L +LYA L L +LL R M+ W Sbjct: 196 LIVAETIAASSGIG-YITMQAREFMQTDVLVMGILLYAALGKLADTV--ARLLERQMLRW 252 Query: 267 SNKFR 271 ++ Sbjct: 253 HPAYQ 257 Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 33/186 (17%) Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL-------LMIFGTQ 461 G +S + Q++ P PLV+ LW + L+ G Sbjct: 88 GLSSTLSRLLDSTLQMIRNIPHLALIPLVI-----------LWFGIGEQGKLFLVAEGVL 136 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + + N G + E+ + ++ W +R I+LPG P + G A G W Sbjct: 137 FPVYVNTYHGIRNVDSGLLEMGQVYGLSRWEVFRDIVLPGALPSILVGVRYALGVMWLTL 196 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF---------VLALNRF 572 IV+E + ++G+G ++ E +V+G+L+ +L Sbjct: 197 IVAETIA------ASSGIGYITMQAREFMQTDVLVMGILLYAALGKLADTVARLLERQML 250 Query: 573 LWHPLY 578 WHP Y Sbjct: 251 RWHPAY 256 >gi|326794337|ref|YP_004312157.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326545101|gb|ADZ90321.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 299 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 21/197 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS + + + L A+S R ++ P+LDIMQ++P +L V Sbjct: 101 EDTMRTLSIITVCTFLSIAIGVPIGILMARSNRAQSIITPLLDIMQTMPAFVYLIPVV-- 158 Query: 123 FMNLYPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GK+ G I+AI ++ N+ + +P + E + ++ + Q+ + Sbjct: 159 -MLLGIGKIPGLIAVIIYAIPPVIRLTNLGIRL------VPHETLEAATAYGATPTQRLF 211 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP ++ + ++ VV + MI V G+G + +I Q Sbjct: 212 GVQLPLAMPTIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFTLG 264 Query: 242 LYAMLTMLGVIFLYDQL 258 L L ++ + ++D++ Sbjct: 265 LLNGLAIVALAIMFDRV 281 >gi|238855420|ref|ZP_04645730.1| maltose ABC transporter permease protein [Lactobacillus jensenii 269-3] gi|260665273|ref|ZP_05866122.1| maltose ABC transporter permease [Lactobacillus jensenii SJ-7A-US] gi|282933073|ref|ZP_06338463.1| maltose ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|313472711|ref|ZP_07813199.1| sugar ABC transporter, permease protein [Lactobacillus jensenii 1153] gi|238831910|gb|EEQ24237.1| maltose ABC transporter permease protein [Lactobacillus jensenii 269-3] gi|239529321|gb|EEQ68322.1| sugar ABC transporter, permease protein [Lactobacillus jensenii 1153] gi|260561010|gb|EEX26985.1| maltose ABC transporter permease [Lactobacillus jensenii SJ-7A-US] gi|281302831|gb|EFA95043.1| maltose ABC transporter, permease protein [Lactobacillus jensenii 208-1] Length = 285 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 30/55 (54%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 IPR ++E + + WQ FW +G+P S P +V+ + + G W + S +I+ Sbjct: 165 TIPRAIDEAAEIDGATKWQVFWNIGLPLSKPMIVYTALTAFIGPWVDFIFSGIIL 219 >gi|111021912|ref|YP_704884.1| ABC transporter, permease component [Rhodococcus jostii RHA1] gi|110821442|gb|ABG96726.1| ABC transporter, permease component [Rhodococcus jostii RHA1] Length = 291 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 12/189 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R ++ +A +I IP+GI I +RP +S + P +L A P+ + + Sbjct: 102 SLSRALIGFFVAVVIAIPLGIAIAWYRP-VSDFLNPILELFRNTAALALLPVFILILGIG 160 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L+I+ + IL N I+G + ASS ++ R ++ ++LP P Sbjct: 161 EESKIA----LVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVP 216 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG A + I +E+ GLG I S P + G++ + Sbjct: 217 TIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITASQFNFQIPNMYAGIVAISV 270 Query: 565 FVLALNRFL 573 L LN L Sbjct: 271 LGLTLNAVL 279 >gi|15600570|ref|NP_254064.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107104479|ref|ZP_01368397.1| hypothetical protein PaerPA_01005556 [Pseudomonas aeruginosa PACS2] gi|116053524|ref|YP_793851.1| putative BC-type proline/glycine betaine transport system, permease component [Pseudomonas aeruginosa UCBPP-PA14] gi|218894480|ref|YP_002443350.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254237937|ref|ZP_04931260.1| hypothetical protein PACG_04041 [Pseudomonas aeruginosa C3719] gi|254242929|ref|ZP_04936251.1| hypothetical protein PA2G_03715 [Pseudomonas aeruginosa 2192] gi|296392237|ref|ZP_06881712.1| glycine/betaine/L-proline ABC transporter, permease protein [Pseudomonas aeruginosa PAb1] gi|313111693|ref|ZP_07797487.1| putative BC-type proline/glycine betaine transport system, permease component [Pseudomonas aeruginosa 39016] gi|9951700|gb|AAG08762.1|AE004950_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588745|gb|ABJ14760.1| putative BC-type proline/glycine betaine transport system, permease component [Pseudomonas aeruginosa UCBPP-PA14] gi|126169868|gb|EAZ55379.1| hypothetical protein PACG_04041 [Pseudomonas aeruginosa C3719] gi|126196307|gb|EAZ60370.1| hypothetical protein PA2G_03715 [Pseudomonas aeruginosa 2192] gi|218774709|emb|CAW30526.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310883989|gb|EFQ42583.1| putative BC-type proline/glycine betaine transport system, permease component [Pseudomonas aeruginosa 39016] Length = 279 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L P+LD+MQ++P +L T+ F + + PG + IFA+ + +T Q Sbjct: 127 LRPLLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVIFAV--AAPIRLTCLGIQ-- 178 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIV 214 ++P +L + ++F S WQ + +P +MP G+ +M+S+S M+V Sbjct: 179 -DVPAELLDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQCIMLSLS----------MVV 227 Query: 215 VGDTVIPLPGIGSYIALAIKEQDL 238 + ++ G+G + A+ D+ Sbjct: 228 IA-ALVGADGLGKPVVNALNTADI 250 >gi|167854721|ref|ZP_02477500.1| ABC transporter, permease protein [Haemophilus parasuis 29755] gi|167854135|gb|EDS25370.1| ABC transporter, permease protein [Haemophilus parasuis 29755] Length = 245 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/174 (20%), Positives = 78/174 (44%), Gaps = 10/174 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R++V + +A + IP+G+ +G + P Q L + P+VV + Sbjct: 64 RIIVGLTVALLCGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLEV----G 119 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 +L + L+ F W ++ + +G + + ++ S + +II+P I + +T Sbjct: 120 DLPVYFLIAFAAIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPAITGHILT 179 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G + G AW + E+ GLG +I ++ ++ ++ E++ V+++ Sbjct: 180 GLRVSLGIAWVVLVPCEMLGVNE------GLGYFILDTRDRLAYSELMAAVIVI 227 >gi|116255813|ref|YP_771646.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115260461|emb|CAK03565.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 264 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 12/200 (6%) Query: 372 TYQDVLYVIWLGCITMFRVVVLI--IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 ++ + + W+G I V LI ++ +I IP+ + + P +S + P ++ + P Sbjct: 55 SFSSIGFERWMGHIAATLRVALIGYAMSIVIAIPLAVVMMRSPFLSRTLYPLLVVVQSTP 114 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 P+++ + P + ++ L+ F + ++ + G +A P + E++ S + Sbjct: 115 VVAIAPIIIVVLGAGD-APRIVITCLITF---FPLVVSTATGLAATPPELIELSRSLRAS 170 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 G+R I LP PY + + A ++V+E + G+G +I ST Sbjct: 171 GFREITQIRLPFAVPYIFSALKISITLAVIGAVVAEFCA------SEAGVGYFIQLSTSL 224 Query: 550 GSFPEVVLGVLIMCCFVLAL 569 P+ G+L++ L L Sbjct: 225 FKLPQAWAGLLVLAAMSLLL 244 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 24/201 (11%) Query: 69 TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TLR+ L +S++ A + +S L L P+L ++QS P++ +V Sbjct: 71 TLRVALIGYAMSIVIAIPLAVVMMRSPFLSRTLYPLLVVVQSTPVVAIAPIIIV------ 124 Query: 128 PGKVIGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 V+GA A I + + S L P +L E+SRS R SG+++ + +P Sbjct: 125 ---VLGAGDAPRIVITCLITFFPLVVSTATGLAATPPELIELSRSLRASGFREITQIRLP 181 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL------LA 240 F++P + + +S++ V +E G+G +I L+ L L Sbjct: 182 FAVPYIFSALKISITLAVIGAVVAEFCASEA------GVGYFIQLSTSLFKLPQAWAGLL 235 Query: 241 ILYAM-LTMLGVIFLYDQLLF 260 +L AM L + + L +LLF Sbjct: 236 VLAAMSLLLFQAVVLTQKLLF 256 >gi|115359284|ref|YP_776422.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|115284572|gb|ABI90088.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] Length = 255 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%) Query: 69 TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121 TL L + +S L + A A A +R G +P+ +DI Q+ P + L V Sbjct: 62 TLAHLGTVALSSLIGMLIAVAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPA 121 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 L P +I L + IF S + L ++PRD+ + +R +SGWQ+ Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172 Query: 182 YLGVPFSMPGLVWNMMMSM 200 + +P + P +V + +++ Sbjct: 173 SVELPLAFPVIVNGIRLAV 191 >gi|239817721|ref|YP_002946631.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239804298|gb|ACS21365.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 267 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 19/128 (14%) Query: 74 SAMVISL---LFTFVYATLAA--------KSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 SA++++L L +F+ AT+A +S+R+ L P ++Q PI+ +++ Sbjct: 62 SALLVTLKITLLSFLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIW 121 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 N + A L A+F I + N T L +I DL+ + R + WQ+ Sbjct: 122 VKNPVAAMTVCAALVALFPIIS----NTTL----GLRSIDPDLQSYFKLNRATRWQQLVR 173 Query: 183 LGVPFSMP 190 L +P ++P Sbjct: 174 LRIPSALP 181 >gi|295129956|ref|YP_003580619.1| ABC transporter, permease protein [Propionibacterium acnes SK137] gi|291375484|gb|ADD99338.1| ABC transporter, permease protein [Propionibacterium acnes SK137] gi|313772946|gb|EFS38912.1| ABC transporter, permease protein [Propionibacterium acnes HL074PA1] gi|313793031|gb|EFS41098.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA1] gi|313802521|gb|EFS43743.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA2] gi|313811083|gb|EFS48797.1| ABC transporter, permease protein [Propionibacterium acnes HL083PA1] gi|313831848|gb|EFS69562.1| ABC transporter, permease protein [Propionibacterium acnes HL007PA1] gi|313834609|gb|EFS72323.1| ABC transporter, permease protein [Propionibacterium acnes HL056PA1] gi|313840160|gb|EFS77874.1| ABC transporter, permease protein [Propionibacterium acnes HL086PA1] gi|314964446|gb|EFT08546.1| ABC transporter, permease protein [Propionibacterium acnes HL082PA1] gi|314974610|gb|EFT18705.1| ABC transporter, permease protein [Propionibacterium acnes HL053PA1] gi|314977197|gb|EFT21292.1| ABC transporter, permease protein [Propionibacterium acnes HL045PA1] gi|314985706|gb|EFT29798.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA1] gi|315078541|gb|EFT50572.1| ABC transporter, permease protein [Propionibacterium acnes HL053PA2] gi|315081995|gb|EFT53971.1| ABC transporter, permease protein [Propionibacterium acnes HL078PA1] gi|315097446|gb|EFT69422.1| ABC transporter, permease protein [Propionibacterium acnes HL038PA1] gi|327331469|gb|EGE73208.1| ABC transporter, permease protein [Propionibacterium acnes HL096PA2] gi|327447142|gb|EGE93796.1| ABC transporter, permease protein [Propionibacterium acnes HL043PA1] gi|327449823|gb|EGE96477.1| ABC transporter, permease protein [Propionibacterium acnes HL043PA2] gi|327456983|gb|EGF03638.1| ABC transporter, permease protein [Propionibacterium acnes HL092PA1] gi|328761812|gb|EGF75325.1| ABC transporter, permease protein [Propionibacterium acnes HL099PA1] Length = 296 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 F M QS ++P +LEE +R + WQ FW + VP PGL M+ ++ W Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227 >gi|148543422|ref|YP_001270792.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus reuteri DSM 20016] gi|227363571|ref|ZP_03847688.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|325681765|ref|ZP_08161284.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530456|gb|ABQ82455.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus reuteri DSM 20016] gi|227071367|gb|EEI09673.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|324978856|gb|EGC15804.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 221 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%) Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQP-------FAQLLAAFPANVFFPLVVSCVSY 443 VV ++I+ II +P+G +I S+I+P FAQLL P+ L++ + Sbjct: 33 VVTLVISMIIALPLG-------YIGSRIKPVAQFCVMFAQLLRIIPSLALLFLLIPFIGT 85 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L +L + +L N I G + +KEV + + + R I +P Sbjct: 86 GVVPALIALIVLAL----PPLLINTILGFNEVSPLYKEVGIALGMDQRQLRRQIEIPLAL 141 Query: 504 PYYVTG-AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 PY + G + +A++ + + + G L TGLG Y G+ +L +L M Sbjct: 142 PYILNGIKLALVEIIASATLATYIGAGGLGTLIFTGLGLYDMSYVVIGAVSVAILSLLAM 201 Query: 563 CCFVLALNRFLWH 575 F + + H Sbjct: 202 ISFDFLIRKVQKH 214 >gi|294053878|ref|YP_003547536.1| binding-protein-dependent transport systems inner membrane component [Coraliomargarita akajimensis DSM 45221] gi|293613211|gb|ADE53366.1| binding-protein-dependent transport systems inner membrane component [Coraliomargarita akajimensis DSM 45221] Length = 542 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 9/116 (7%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 VW + + +I +D V+R RL+ W++ + +P +MP + + +S+ GW Sbjct: 417 VWPALVNTALGVASIDKDHINVARVLRLNFWERLTKIIIPSAMPLVFAGLRISLGVGWMV 476 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA---ILYAMLTMLGVIFLYDQLL 259 ++A+E + D G+G ++ + + ILYA + + F+ D+++ Sbjct: 477 LIAAEALSSSD------GLGKFVWDEYQNGSSFSFANILYACFVVGAIGFMLDRMM 526 >gi|238751321|ref|ZP_04612814.1| Binding-protein-dependent transport system inner membrane component [Yersinia rohdei ATCC 43380] gi|238710379|gb|EEQ02604.1| Binding-protein-dependent transport system inner membrane component [Yersinia rohdei ATCC 43380] Length = 255 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 6/110 (5%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++I G + ILFN I G +VA ++ + + I LP P + G Sbjct: 128 VIILGCLFPILFNFIGGVEQVDKKLIDVAKVLNLNKSQIFYRIYLPSALPSILIGLRVGL 187 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G +W + + +E+ + + GLG + ++ +++GVL++ C Sbjct: 188 GFSWRSLVGAELIA------SSAGLGYMMLDAESLARTDIILVGVLVIGC 231 >gi|153938266|ref|YP_001390731.1| putative ABC transporter, permease protein [Clostridium botulinum F str. Langeland] gi|152934162|gb|ABS39660.1| putative ABC transporter, permease protein [Clostridium botulinum F str. Langeland] gi|295318804|gb|ADF99181.1| putative ABC transporter, permease protein [Clostridium botulinum F str. 230613] Length = 253 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 36/83 (43%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 NV++G + E+A+ + + I LP PY ++G + G W S+ SEV Sbjct: 144 NVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTKPYIISGILMCLGIGWKVSVASEV 203 Query: 527 ASWGHIHLRTTGLGAYIAESTEK 549 S + L A +TE+ Sbjct: 204 LSTPKYSIGLNLLNAKATLATEE 226 >gi|149190075|ref|ZP_01868352.1| ABC transporter permease protein [Vibrio shilonii AK1] gi|148836105|gb|EDL53065.1| ABC transporter permease protein [Vibrio shilonii AK1] Length = 268 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 19/174 (10%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+PIL Q+IP+ +++ KV+ A L F + T Y L Sbjct: 110 LLPILITSQAIPVFALAPILMLWLGYGIASKVVMAALIIFFPVTTC--------CYDGLR 161 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 N P ++S++ S +++ W++ +P S+P L + +++ VVA V G+ V Sbjct: 162 NTPVGYLDLSQTMGASRFRQLWHIRLPASLPVLASGIRVAV------VVAPIGAVAGEWV 215 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLG----VIFLYDQLLFRPMIVWSNK 269 G+G Y+ L + L+ ++A L +L ++ + + +I W NK Sbjct: 216 GSSEGLG-YLMLQANARMLIDEMFAALFILASVSVALYFFTDWGLKRLIPWENK 268 >gi|332885955|gb|EGK06199.1| hypothetical protein HMPREF9456_00073 [Dysgonomonas mossii DSM 22836] Length = 253 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 16/181 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ I I+ I + +G+W+G+ ++S + P P P+++ Sbjct: 63 SLRRIAYSIGISLGIALVLGVWMGYSKRVNSLLGPMIYFSYPIPKLALLPIIMVLFDLGE 122 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE---VASSFHITGWRWWRYIILPGI 502 + + + L+++F +I A N KE V SF TG + R+I LP I Sbjct: 123 TSKIVIVILIVVFQL-------IITIRDAVKNISKENYYVLISFGATGLQKMRHITLPAI 175 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P + A G A +A E ++G GLG YI +S + + ++ G++++ Sbjct: 176 LPEVFSSLRVALGIATSALFFIE--TFG----TDKGLGFYITDSQMRVDYVQMYFGIIVL 229 Query: 563 C 563 Sbjct: 230 S 230 >gi|254881663|ref|ZP_05254373.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643048|ref|ZP_07997681.1| ABC transporter permease [Bacteroides sp. 3_1_40A] gi|254834456|gb|EET14765.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317385329|gb|EFV66275.1| ABC transporter permease [Bacteroides sp. 3_1_40A] Length = 395 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFTVV-----YFMNLYPGK--VIGAE 135 VY + A R L P+++++ IP + GF V+ NL G+ + G+ Sbjct: 198 VYMSEVADHRTRSF-LKPVIELLSGIPSVVYGFFGLIVIVPLIQKVFNLPVGETGLAGSI 256 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + AI A+ T +T S ++ N PR + E S + + WQ + + +PFS+ G+ Sbjct: 257 VLAIMALPTI----ITVS-EDAMRNCPRAMREASLALGATRWQTIYKVVIPFSVSGITSG 311 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLAILYAMLTML 249 +++ + +A M+ VI PL I + IA + E Y L +L Sbjct: 312 VVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGAHYEALFLL 371 Query: 250 GVIFLYDQLL 259 GV+ + +L Sbjct: 372 GVVLFFITML 381 >gi|239813638|ref|YP_002942548.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239800215|gb|ACS17282.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 258 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 8/114 (7%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +++L+ A + R + ++ P+L +QS+P + +V+ K+ A L Sbjct: 72 ILALVLGIPLAVAVSTFRLINLMFYPLLVALQSVPKVALAPLLLVWLGTGMESKLAIAWL 131 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A F I L + P++L E++RS R S WQ F + P ++P Sbjct: 132 VAFFPIVVDTA--------AGLQSTPKELLELARSLRASPWQLFAKVRFPAALP 177 >gi|300309985|ref|YP_003774077.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072770|gb|ADJ62169.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 278 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 25/178 (14%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV +I S + + +G+ +G + ++P Q L A P+ + PL++ Sbjct: 77 AASLARVAAGFVIGSALAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLL----- 131 Query: 444 YHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 LWL + L+ G + + N++AG + EV ++ + + Sbjct: 132 ------LWLGIDETPKVVLIAIGAFFPVYLNLVAGIRDIDHKLIEVGTTSGLNTQALIGH 185 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 I+LP PY G AW + +E+ + T G+G Y+ + S P+ Sbjct: 186 ILLPASLPYLFAGLRGGLSLAWMFLVAAELIA------ATKGVG-YLLSDGRESSRPD 236 >gi|253578372|ref|ZP_04855644.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850690|gb|EES78648.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 262 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 WQS+G+ + R+V ++A ++ I + +W + + P Sbjct: 65 WQSVGF-------------------SFVRIVTGFLLAVLLGIFLAVWAYWSKTVEILTAP 105 Query: 421 FAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 ++ + P F ++ C+ + N ++++S LM+ I N++ G Sbjct: 106 VIAVVKSTPVASF---IILCLIWIPSKNLSVFISFLMVLPV---IYTNILEGIRQTDRKI 159 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E+A F + R RYI + + PY+++ + G W A + +EV Sbjct: 160 LEMAKVFRVNLRRQIRYIYVSQVLPYFLSACRLSLGMCWKAGVAAEV 206 >gi|168491302|ref|ZP_02715445.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CDC0288-04] gi|183574337|gb|EDT94865.1| phosphate ABC transporter, permease protein PstC [Streptococcus pneumoniae CDC0288-04] Length = 305 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ VV + +++ G G L+ I +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQVVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SFAMGSTRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|307545947|ref|YP_003898426.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307217971|emb|CBV43241.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 279 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 29/168 (17%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A +++++ AA S RL ++PILD MQ++P +L + +F Sbjct: 101 ATLVAVVIALPVGIAAALSERLYRTIMPILDFMQTMPAFVYLIPAIPFF----------- 149 Query: 135 ELAAIFAIFTSQVWNMTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 + ++ AIF + +++M ++ + +P +L E + ++ + QK + +P S+P Sbjct: 150 GIGSVSAIFATVIFSMPPAIRFTTLGIRQVPVELVEAADAYGATRSQKLIKVQLPMSLPT 209 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 G+ +M+++S M+V+ +I G+GS + AI+ Sbjct: 210 VMAGINQTIMLALS----------MVVIA-AMIGADGLGSEVWRAIQR 246 >gi|258406392|ref|YP_003199134.1| binding-protein-dependent transport systems inner membrane component [Desulfohalobium retbaense DSM 5692] gi|257798619|gb|ACV69556.1| binding-protein-dependent transport systems inner membrane component [Desulfohalobium retbaense DSM 5692] Length = 279 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 18/137 (13%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A I+++ AA ++ V+ PILD MQ++P +L + +F Sbjct: 96 VLVATAIAVMIGVPLGIFAALNQTFFRVVTPILDFMQTMPAFVYLIPAIPFF-------- 147 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 L + AIF++ ++ M S+ + + +P +L E + +F + QK + L +P + Sbjct: 148 ---GLGKVAAIFSTVIFAMPPSIRLTSLGIRQVPGELVEAADAFGSTKSQKLFKLQLPLA 204 Query: 189 MP----GLVWNMMMSMS 201 P G+ +M+++S Sbjct: 205 TPTILAGVNQTIMLALS 221 >gi|241258731|ref|YP_002978615.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863201|gb|ACS60864.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 272 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/170 (20%), Positives = 73/170 (42%), Gaps = 8/170 (4%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 A + +I + T Q Y++W ++ R+ + I++I + +G+ IG P++ + + Sbjct: 54 AIDRLAFIADPRTGQ---YLLWSDTGASLIRLFAGLGISTITALVIGMLIGMLPYLRALL 110 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 PF +++ P P++ + + L++ G ++ ++ A P + Sbjct: 111 SPFVAVISMVPPLALLPILFIAMGLGEASK----IALIVIGVAPTMIRDLALKALELPRE 166 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 A + + W+ ++LP I P +T G AW I +E S Sbjct: 167 QIVKAETLGGSSWQIGLRVVLPQILPRLITCLRLQLGPAWLFLIAAEAIS 216 >gi|167037243|ref|YP_001664821.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040617|ref|YP_001663602.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter sp. X514] gi|256751998|ref|ZP_05492867.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter ethanolicus CCSD1] gi|300914658|ref|ZP_07131974.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter sp. X561] gi|307724108|ref|YP_003903859.1| phosphate ABC transporter inner membrane subunit PstC [Thermoanaerobacter sp. X513] gi|320115662|ref|YP_004185821.1| phosphate ABC transporter inner membrane subunit PstC [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166854857|gb|ABY93266.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter sp. X514] gi|166856077|gb|ABY94485.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749108|gb|EEU62143.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter ethanolicus CCSD1] gi|300889593|gb|EFK84739.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter sp. X561] gi|307581169|gb|ADN54568.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter sp. X513] gi|319928753|gb|ADV79438.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 299 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 4/133 (3%) Query: 93 SRRLGM-VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +++LG +L P ++I IP + G++ TV V F++ + G + + LA I + + Sbjct: 108 AKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVPFISKHFGGLGFSLLAGILVLTIMTLP 167 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +T ++ ++P ++ E S + + WQ ++ +P + PG++ +++ ++ + + Sbjct: 168 TITSVSTDAIKSLPTEIREASYALGATRWQTIRHVILPAAKPGILTAIVLGLARAFGEAL 227 Query: 209 ASEMIVVGDTVIP 221 A +M++ VIP Sbjct: 228 AVQMVIGNRPVIP 240 >gi|119387469|ref|YP_918503.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119378044|gb|ABL72807.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] Length = 279 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 F LAA+ R+ L PILD+MQ++P +L V+ F GKV AI A Sbjct: 105 FPLGILAARRPRVEAALRPILDVMQTVPPWVYLIPAVMIFSL---GKV-----PAIIATI 156 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 V M + +P+DL+E+ + W + P + P L+ Sbjct: 157 VYGVPPMLRLTTLAFRGVPKDLKELGEAIGAKPGTILWKIEFPAATPTLL 206 >gi|46143846|ref|ZP_00204581.1| COG1176: ABC-type spermidine/putrescine transport system, permease component I [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207769|ref|YP_001052994.1| spermidine/putrescine ABC transporter membrane protein [Actinobacillus pleuropneumoniae L20] gi|190149552|ref|YP_001968077.1| spermidine/putrescine transporter permease potB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307249496|ref|ZP_07531484.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251812|ref|ZP_07533714.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307262872|ref|ZP_07544496.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126096561|gb|ABN73389.1| spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189914683|gb|ACE60935.1| spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306858489|gb|EFM90557.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860719|gb|EFM92730.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306871777|gb|EFN03497.1| Spermidine/putrescine transport system permease protein potB [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 288 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P IG+ I + A+ A+ Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288 >gi|240140551|ref|YP_002965031.1| ABC transporter, permease [Methylobacterium extorquens AM1] gi|240010528|gb|ACS41754.1| ABC transporter, permease [Methylobacterium extorquens AM1] Length = 353 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 ++S++ +P+GI G +P I+ +P + + PA F L+V+ + Y P + + ++ Sbjct: 171 LSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 229 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 F Q ++ N E A + R R +I+P + P G Sbjct: 230 GTFFQQVLVIANTTRRVDPL---LIEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 286 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 AW IV+E+ ++G+ +I + F V +L++ +A + Sbjct: 287 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 335 >gi|210623532|ref|ZP_03293877.1| hypothetical protein CLOHIR_01827 [Clostridium hiranonis DSM 13275] gi|210153590|gb|EEA84596.1| hypothetical protein CLOHIR_01827 [Clostridium hiranonis DSM 13275] Length = 208 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 4/138 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ITM RV+ A +I +P+G +GF + P + P + PL + Sbjct: 75 ITMQRVMKGFGYALVIGLPIGFIMGFSNTCEKVLSPVIDSVRQVPIMSWVPLTIVWFGIG 134 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P ++L + F + I+ N I G D+ A S + + ++ +I P P Sbjct: 135 D-GPTIFL---IAFSGIFSIVLNTIHGVRTISKDYYNAAKSMGASPFIIFKDVIFPAALP 190 Query: 505 YYVTGAITACGGAWNASI 522 +TGA A W + I Sbjct: 191 DILTGARLAISNGWMSVI 208 >gi|284030568|ref|YP_003380499.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] gi|283809861|gb|ADB31700.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] Length = 300 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 15/209 (7%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + ++L + W +++ R V+ I+ +I +P+G+ I + I P L + P+ Sbjct: 90 STGEILSLFW---VSVHRAVIGFAISLLIAVPLGLAIANITVVRRGIGPLVSGLQSLPSV 146 Query: 432 VFFPLVVSCVSYYHLNPNL--WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + P + + ++ LN W+ LL G I +++G P V + Sbjct: 147 AWVP---AAILWFGLNDRAIYWVVLL---GAVPSIANGLVSGLDQVPPILPRVGKALGAG 200 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAESTE 548 W RYI+LP P ++ G +W + + +E +A+ + GLG ++ Sbjct: 201 RWGGIRYILLPAALPGFLGGLKQGWAFSWRSLMAAELIATSPDLG---EGLGQFLHNGMS 257 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 V G+L++ + + ++ PL Sbjct: 258 LSDISMVFAGILLIFVVGVGIELLVFRPL 286 >gi|148258970|ref|YP_001243555.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146411143|gb|ABQ39649.1| carbohydrate ABC transporter membrane protein 1, CUT1 family [Bradyrhizobium sp. BTAi1] Length = 295 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 13/93 (13%) Query: 138 AIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 A+ I ++W T M L +P D+ E + S WQ+FW G+ Sbjct: 157 ALACIIAVEIWQWTPFIILMMLAGLQTLPEDVYEAAELENASAWQQFW---------GIT 207 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 + MM+ +SG F+ E + DTV + G G Sbjct: 208 FPMMLPISGAVVFIRLIESYKIMDTVFVMTGGG 240 >gi|145534309|ref|XP_001452899.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420598|emb|CAK85502.1| unnamed protein product [Paramecium tetraurelia] Length = 486 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 10/90 (11%) Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 Y+T A K++ L + ++D+M IL + ++ +N Y ++ AE F ++S Sbjct: 82 YST-AFKNKELDKAIDAVVDVM----ILHVVRDNILGLLNTY---ILVAETYLKFTYYSS 133 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + T++ LC+I D+EEV +SFRL Sbjct: 134 AI--QTYTQLLHLCDICNDVEEVQKSFRLK 161 >gi|222054757|ref|YP_002537119.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221564046|gb|ACM20018.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 263 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 40/247 (16%) Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVN---------HFTYQDVLYVIWLG 383 +NQR+ + + + + VAI + WQ++ GYI T+ D+L + Sbjct: 5 TNQRLLKIKHLLQYLSLS-VAILVVWQALFQLGYIKPIILPPPSRIALTFLDLLKSGEMA 63 Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 I++ RV+ IA+++ + +GI IG + Q++ P + PL + Sbjct: 64 KHLGISVLRVLEGFGIAALLGLSLGIAIGLSRTLDRLTDLVIQVIKPIPPIAWIPLAI-- 121 Query: 441 VSYYHLNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 LW + ++ G + ++ N I G + F EVA + ++ Sbjct: 122 ---------LWFGIGEQSKVYIIFLGAFFPVIINTIDGIRQTDHKFVEVARILEVPRRKF 172 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 +++PG P +TG AW + +E+ + ++G+G I ++ + Sbjct: 173 IGQMVIPGALPAIMTGIRIGLMVAWMCVVAAELIA------ASSGIGYLIMDARQLSQSD 226 Query: 554 EVVLGVL 560 V++G++ Sbjct: 227 VVLVGMI 233 >gi|323697512|ref|ZP_08109424.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. ND132] gi|323457444|gb|EGB13309.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans ND132] Length = 262 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 12/161 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T R + +A+++ VGI G P ++ ++P +L P + L + Sbjct: 66 VTAGRALGGFAVAAVLGSTVGILAGLHPALARTLRPITAMLLGIPPIAWIVLAMLWFGTT 125 Query: 445 HLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L P + + T I+F V + GA +++ SF + + LP I Sbjct: 126 GLTP-----VFTVVVTALPIVFAVAVEGARTRDRGLEDMGRSFDTPPAMLFLDVRLPHIL 180 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 Y G +TA G +W ++++E+ + T G+GA +A Sbjct: 181 SYLFPGWVTALGLSWKVAVMAELLA------STDGIGADLA 215 >gi|295689420|ref|YP_003593113.1| binding-protein-dependent transport systems inner membrane component [Caulobacter segnis ATCC 21756] gi|295431323|gb|ADG10495.1| binding-protein-dependent transport systems inner membrane component [Caulobacter segnis ATCC 21756] Length = 269 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R + IA ++ + +G+ G + + P Q+ P+ PL + + Sbjct: 73 AVSLARAGAGLSIALVVAVTLGLISGLSRWGETLVDPLMQIKRTIPSLALTPLFIV---W 129 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + ++L+ + T + + N+ +G + E A SF + GW R +ILPG Sbjct: 130 FGIGETPKIALIAVAAT-FPLYLNLFSGIRSVDVRLVEAARSFGLRGWSLVREVILPGAL 188 Query: 504 PYYVTGAITACGGAWNASIVSE 525 P + G A G + ++SE Sbjct: 189 PSFFVGLRYALGVSVLVLVISE 210 >gi|239813174|ref|YP_002942084.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239799751|gb|ACS16818.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 292 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV ++A+++ +P+GI +G + + +PF PA+ F PL++ Sbjct: 101 MTVWRVFGGFLLAAVLAVPLGIAMGTWKAVEAFFEPFVSFCRYLPASAFIPLLILWAGLG 160 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+IF G+ + I+ V D E A + +++PG Sbjct: 161 EMQ-----KLLVIFIGSFFQIVLMVAVTVGGARRDLVEAAYTLGAKSRGIVARVLIPGAA 215 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 216 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 252 >gi|152991333|ref|YP_001357055.1| sulfonate/nitrate ABC transporter permease [Nitratiruptor sp. SB155-2] gi|151423194|dbj|BAF70698.1| sulfonate/nitrate ABC transporter, permease [Nitratiruptor sp. SB155-2] Length = 260 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 6/114 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + + G + F+E+A +F + + I LP IF Y ++A G AW ++ Sbjct: 144 VFIGALQGTRTLEDKFEEMADTFKVPKLMKFTDIYLPHIFSYIFPSWVSALGMAWKIVVM 203 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 +E+ + + G+GA +A + + + V+IM ++ + P+ Sbjct: 204 AELLA------TSDGIGAALAMARSQLDTKTALALVVIMIALLMIVEYIFLEPI 251 >gi|120403531|ref|YP_953360.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium vanbaalenii PYR-1] gi|119956349|gb|ABM13354.1| carbohydrate ABC transporter membrane protein 1, CUT1 family [Mycobacterium vanbaalenii PYR-1] Length = 310 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +NL G +AIF I S++W T + L +P D++E ++ + WQ+ Sbjct: 157 LNLTEFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQVPEDMQEAAKVDGATAWQR 216 Query: 180 FWYLGVP 186 W + +P Sbjct: 217 LWKITLP 223 >gi|15891015|ref|NP_356687.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15159340|gb|AAK89472.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 283 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 9/129 (6%) Query: 66 SRTTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S TL +++ A++IS+ F LA++++R L P+LDIMQ++P +L V+ F Sbjct: 91 SMQTLALVTVAVIISVSIAFPLGILASRNKRFETALRPLLDIMQTVPPWVYLIPAVMIFS 150 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G+V AI A V M + +P+DL E+ ++ S + Sbjct: 151 L---GRV-----PAIIATIVYGVPPMLRLTTLAFNQVPKDLLELGQASGASPRAILLKIE 202 Query: 185 VPFSMPGLV 193 +P + P L+ Sbjct: 203 IPSATPTLL 211 >gi|121603147|ref|YP_980476.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] gi|120592116|gb|ABM35555.1| carbohydrate ABC transporter membrane protein 2, CUT1 family [Polaromonas naphthalenivorans CJ2] Length = 298 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 34/69 (49%) Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 YQ +P+DLEE + S W+ +W + +P S P + ++ W ++ M+V Sbjct: 180 YQFFIALPKDLEEAALMDGASRWRIYWSIVMPLSKPVIATVTVLQFLARWGDLLWPVMVV 239 Query: 215 VGDTVIPLP 223 GDT LP Sbjct: 240 RGDTFATLP 248 >gi|325497215|gb|EGC95074.1| ABC transporter membrane protein [Escherichia fergusonii ECD227] Length = 217 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 11/196 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +I+LG +F V + A +I +P GI + RP + Q+ N PL V Sbjct: 20 LIYLGQQHLFLVFTSLFFALLIGVPSGILLS-RPAARGFAEHAMQIFNV--GNTLPPLAV 76 Query: 439 SCVSYYHLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 ++ L +++ +F + I+ N AG +A P KE A +T W+ + Sbjct: 77 LALAMIILGIGDTPAIVALFLASLLPIVRNTYAGLNAVPASLKEAAKGIGMTRWQRLYLV 136 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 LP +P ++G A A+I+ A + + + G I FP ++L Sbjct: 137 ELPNAWPVMLSGIRIA------AAIIVGTAPLAFL-IGASSYGELIFPGIYLNDFPTLIL 189 Query: 558 GVLIMCCFVLALNRFL 573 G F L L+ L Sbjct: 190 GATATALFALILDSLL 205 >gi|296333343|ref|ZP_06875796.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|296149541|gb|EFG90437.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] Length = 309 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154 VL P+++++ IP + GF+ TV V F+ + G L A + + + +T Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSIMILPTITSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ ++P+ L E S + + WQ + VP + P L+ +++ M+ + +A +M++ Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 V+P Sbjct: 245 GNTRVLP 251 >gi|149002789|ref|ZP_01827715.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP14-BS69] gi|147759083|gb|EDK66077.1| phosphate ABC transporter, permease protein, putative [Streptococcus pneumoniae SP14-BS69] Length = 305 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 5/173 (2%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 P + + +LP + +LSA++ + + S + +L P ++++ IP Sbjct: 71 PSSKEFGALPMILGSFIVTILSALIATPFAIGAAVFMTEVSPKGAKILQPAIELLVGIPS 130 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + GF+ +V + +++ G G L+ I +F + +TF SL +PR E Sbjct: 131 VVYGFIGLQIVVPFVRSVFGGTGFGI-LSGISVLFVMILPTVTFMTTDSLRAVPRYYREA 189 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + + WQ W + + + G+ ++ M+ + +A +M+V VIP Sbjct: 190 SFAMGATRWQTIWRVILKAARSGIFTAVVFGMARAFGEALAIQMVVGNSAVIP 242 >gi|148265899|ref|YP_001232605.1| binding-protein-dependent transport systems inner membrane component [Geobacter uraniireducens Rf4] gi|146399399|gb|ABQ28032.1| binding-protein-dependent transport systems inner membrane component [Geobacter uraniireducens Rf4] Length = 262 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 14/162 (8%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 +R + + + F+ L R L ++ P+ + ++ +P+L ++ +++ Sbjct: 72 IRFFAGTFLGITAGFLLGMLFGMFRTLEKLVAPLFNAIRQVPLLAWIPLIIIF------- 124 Query: 130 KVIG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G AE + IF I + + S + + + ++ EV R F + + +P Sbjct: 125 --CGIAEASKIFFIALGCSFPIVLSTFDGIRGVRKEYVEVGRVFGFGRIRLIRKIFLPSV 182 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230 +P LV + MS++ GW +VA+E+ + GIG+ I Sbjct: 183 LPSLVTGLRMSLNIGWGQLVAAELFMFTQA----GGIGNMIG 220 >gi|319782578|ref|YP_004142054.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168466|gb|ADV12004.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 267 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 23/218 (10%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 +A + I I N D++ ++ RV+ ++ I+ IPVG +G+ S I Sbjct: 56 VASRFIDLIANGQLATDIMS-------SLARVMTGFLLGVILAIPVGFVMGWYKVARSLI 108 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 +P+ Q P PL + + P +++ L F L +V+A + Sbjct: 109 EPYLQFFRMIPPLAIIPLAIVTMGIDE-TPKVFVIFLASF------LASVVATYQGVISV 161 Query: 479 FKEVASSFHITGWR---WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 K + ++ + G + + +I+P P+ + G G AW + +E+ + Sbjct: 162 DKTMINAARVLGAKDMTIFLRVIIPASTPFILVGVRIGLGSAWATLVAAELIA------A 215 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 TGLG + ++ P + + ++ + LA++R L Sbjct: 216 QTGLGFRMQQAQLYYDLPTIFVSLITIGLLGLAMDRIL 253 >gi|284048224|ref|YP_003398563.1| binding-protein-dependent transport systems inner membrane component [Acidaminococcus fermentans DSM 20731] gi|283952445|gb|ADB47248.1| binding-protein-dependent transport systems inner membrane component [Acidaminococcus fermentans DSM 20731] Length = 247 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 8/121 (6%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 EL I + + M +M R L EV R S WQ W + +P ++PG++ Sbjct: 116 GELPKTIIIVLASFFPMYLNMDDGFRRCDRKLLEVGRMLCFSPWQSLWKIRLPSALPGIL 175 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGV 251 + + M ++ +EMI G+G I A A+ D + I + LG+ Sbjct: 176 TGLRVGMGYSLRAIIGAEMIAADS------GLGYLILDAQAMSRSDKVFIGILTIGALGL 229 Query: 252 I 252 + Sbjct: 230 V 230 >gi|256391212|ref|YP_003112776.1| binding-protein-dependent transporters inner membrane component [Catenulispora acidiphila DSM 44928] gi|256357438|gb|ACU70935.1| binding-protein-dependent transport systems inner membrane component [Catenulispora acidiphila DSM 44928] Length = 312 Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 139 IFAIFTSQVWNMT-FSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 + A+ + VW T FSM +L ++P D++E + +GW++ W + +P P +V Sbjct: 179 MLAVIIANVWRGTAFSMLVYNAALDDVPADVQEAAELDGATGWRRLWNVILPLIRPSIVT 238 Query: 195 NMMM 198 N+M+ Sbjct: 239 NLML 242 >gi|303258016|ref|ZP_07344025.1| phosphate ABC transporter, permease protein PstC [Burkholderiales bacterium 1_1_47] gi|330999431|ref|ZP_08323145.1| phosphate ABC transporter, permease protein PstC [Parasutterella excrementihominis YIT 11859] gi|302859359|gb|EFL82441.1| phosphate ABC transporter, permease protein PstC [Burkholderiales bacterium 1_1_47] gi|329574857|gb|EGG56416.1| phosphate ABC transporter, permease protein PstC [Parasutterella excrementihominis YIT 11859] Length = 293 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 27/203 (13%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAEL--AAIFAIFTSQV 147 S RL + P ++++ ++P ++GF+ TV+ F+ Y G G + AAI + Sbjct: 99 SSRLRSIFKPFIELLAAMPSVVIGFVGMTVLAPFLQDYFGAPTGLNILNAAILLALMAVP 158 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 T S +L ++PR L+E S + + W+ + +P + G+ +M+ +S V Sbjct: 159 TICTIS-EDALRSVPRSLKESSLALGATHWETLTTVTIPAAFSGIATGVMLGLSR----V 213 Query: 208 VASEMIVVG-------------DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG-VIF 253 + M+V+ D V P+P + I + E + Y L +G V+F Sbjct: 214 IGETMVVLMVAGGAALIPESLFDPVRPMP---ASIVAEMAESPFGSSHYHALFAIGIVLF 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTT 276 + L + S K++L+ ++ Sbjct: 271 FFTFLCNLAAFLVSQKYKLKASS 293 >gi|293605708|ref|ZP_06688085.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815887|gb|EFF74991.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 251 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 10/99 (10%) Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547 T W + + LP + P +TGA A G AW A I +E + +G GLG +A S Sbjct: 158 TRWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 211 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E V+ +L++ +++F+ L R LR Sbjct: 212 EIADMTGVMTNILVIAVLAALIDQFVLENLK---HRLLR 247 >gi|241205621|ref|YP_002976717.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859511|gb|ACS57178.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 304 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%) Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157 I+ ++ IP+LG L + + M + P + + ++ A + A+ M ++ + Sbjct: 137 IIRMISWIPVLGRNGLVNSTLIKMGIIPQPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 196 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L I R L E +R SGWQ W + P + PG M+ G FVV M Sbjct: 197 LMRIDRSLFEAARDAGASGWQVLWNVVFPLAKPG--------MAIGTIFVVTLVMADFST 248 Query: 218 TVIPLPGIGSYIALAIKEQ 236 + G + +AL +K Q Sbjct: 249 VQVMSGGQSASVALMMKNQ 267 >gi|17548288|ref|NP_521628.1| transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17430534|emb|CAD17218.1| probable transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 298 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 23/170 (13%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS+ +ISL AA+SR + V+ PILD+MQ++P +L + F G+V Sbjct: 96 LSSTIISLALGVPLGIWAARSRVVSAVVRPILDLMQTMPAFVYLIPAAMLF---GLGRVP 152 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP-- 190 G IFA+ V + + Q + +L E +F + Q + + +P ++P Sbjct: 153 GILSTVIFAM-PPAVRLTSLGIRQ----VNMELVEAGLAFGCTPRQLLYKVQIPNALPSI 207 Query: 191 --GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 G+ +MM++S V+ + M+ G G+G+ + +I+ D+ Sbjct: 208 MQGVNQTIMMALS----MVIIASMVGAG-------GLGNEVLASIQRLDI 246 >gi|331701700|ref|YP_004398659.1| phosphate ABC transporter inner membrane subunit PstC [Lactobacillus buchneri NRRL B-30929] gi|329129043|gb|AEB73596.1| phosphate ABC transporter, inner membrane subunit PstC [Lactobacillus buchneri NRRL B-30929] Length = 309 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/132 (21%), Positives = 63/132 (47%), Gaps = 5/132 (3%) Query: 94 RRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +R +L P+ +++ IP + GF+ +VV + N + G G L+ F +F + Sbjct: 119 KRGAKILQPVTELLVGIPSVVYGFIGLSVVVPFVRNTFGGSGFGI-LSGTFVLFVMILPT 177 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + SL +P+ + S + + WQ W + + + PG++ ++ M+ + +A Sbjct: 178 IVSMTVDSLRGVPKFYRQASLALGATKWQTIWKVVLRAATPGILTAVVFGMARAFGEALA 237 Query: 210 SEMIVVGDTVIP 221 +M++ ++P Sbjct: 238 VQMVIGNAALMP 249 >gi|330810501|ref|YP_004354963.1| glycine betaine ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378609|gb|AEA69959.1| Glycine betaine ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 282 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 12/131 (9%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++IS+ F +AA+ +R+ L+PIL+IMQ++P +L V+ F G+V Sbjct: 100 AVLISVTIAFPLGVVAARVKRVDDALMPILNIMQTVPPWVYLIPAVMLF---SLGRV--- 153 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP---- 190 AI A + M + +P+DL E+ ++ S + + +P + P Sbjct: 154 --PAIIATIVYGIPPMLRLTTLAFKQLPKDLLELGQASGASPKDILFKIELPTAAPTLLV 211 Query: 191 GLVWNMMMSMS 201 GL ++MS++ Sbjct: 212 GLNQCILMSLA 222 >gi|304315063|ref|YP_003850210.1| ABC-type transporter, permease component [Methanothermobacter marburgensis str. Marburg] gi|302588522|gb|ADL58897.1| predicted ABC-type transporter, permease component [Methanothermobacter marburgensis str. Marburg] Length = 269 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 16/184 (8%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P+ I++ +HS+ +T+ + M+ +LL + +L+ S R ++ +L Sbjct: 37 PQSILNSFTSADMIHSVKLSLLTSTITTVIVMLSALLIAY---SLSEDSFRGKSIVKTVL 93 Query: 105 DIMQSIP-------ILGFLTFT-VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 DI + P +L FL T + Y M+ +++ +L I A F + Y Sbjct: 94 DIPIAFPEILIGIMLLIFLGNTPLNYMMDGLGIQIVFTDLGVICAQFFVSLPYTVRICYS 153 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG--GWFFVVASEMIV 214 + CNI R L+ VSRS + ++ F + +P S G++ +++ S G F V +IV Sbjct: 154 TFCNIDRRLKFVSRSLGYTEFETFRNIMIPLSRDGILAATIITFSRCIGCFGAV---LIV 210 Query: 215 VGDT 218 G T Sbjct: 211 AGGT 214 >gi|209964747|ref|YP_002297662.1| binding-protein-dependent transport systems inner membrane component, putative [Rhodospirillum centenum SW] gi|209958213|gb|ACI98849.1| binding-protein-dependent transport systems inner membrane component, putative [Rhodospirillum centenum SW] Length = 263 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 18/141 (12%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY--FMN 125 T L + A V++++ A L ++SR L L P I+Q P++ V++ + Sbjct: 59 TVLITVQAFVLAVVSGVALAVLFSRSRLLAAALYPYAVILQVTPVVAIAPLVVIWVGYER 118 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG---WQKFWY 182 + +I A + A F I + N T + N+ RDL FRL G WQ W Sbjct: 119 IDLALLILAWIVAFFPILS----NATLGLSSVDPNL-RDL------FRLHGASRWQTLWR 167 Query: 183 LGVPFSMPGLVWNMMMSMSGG 203 L +P ++P ++ M +SGG Sbjct: 168 LQIPSALPYILAG--MKVSGG 186 >gi|305675152|ref|YP_003866824.1| phosphate ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|305413396|gb|ADM38515.1| phosphate ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 309 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154 VL P+++++ IP + GF+ TV V F+ + G L A + + + +T Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAQFKSSGTGHSLLAGTIVLSIMILPTITSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ ++P+ L E S + + WQ + VP + P L+ +++ M+ + +A +M++ Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 V+P Sbjct: 245 GNTRVLP 251 >gi|261339268|ref|ZP_05967126.1| hypothetical protein ENTCAN_05506 [Enterobacter cancerogenus ATCC 35316] gi|288319127|gb|EFC58065.1| aliphatic sulfonates ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 263 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 23/179 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + + + I R Sbjct: 101 IQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------INTWHGIRTIDR 152 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F ++ +P ++P ++ + ++ W ++V +T+ Sbjct: 153 GLVEMARSYGLSGFALFTHVILPGALPSIMVGVRFALGLMWL------TLIVAETISANS 206 Query: 224 GIGSYIALAIKE---QDLLA---ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 GIG Y+A+ +E D++ +LYA+L L + Q L R + W+ + + Sbjct: 207 GIG-YLAMNAREFLQTDVVVVAIVLYALLGKLADV--SAQWLERSWLRWNPAYSPQEAK 262 >gi|332674798|gb|AEE71614.1| putative transport system permease protein [Propionibacterium acnes 266] Length = 249 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 24/41 (58%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 F M QS ++P +LEE +R + WQ FW + VP PGL Sbjct: 172 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGL 212 >gi|298674764|ref|YP_003726514.1| binding-protein-dependent transporter inner membrane subunit [Methanohalobium evestigatum Z-7303] gi|298287752|gb|ADI73718.1| binding-protein-dependent transport systems inner membrane component [Methanohalobium evestigatum Z-7303] Length = 278 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 18/163 (11%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 LD L +T ++S+ VI+L+ L++K+ + P+LD+MQ++P + Sbjct: 84 LDNLQLWSLGMQTIALVISSAVIALIIGIPVGILSSKNDNFKAAIKPLLDLMQTMPPFVY 143 Query: 116 LTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 L V++F + PG + A I + + Q +P +L EV+ +F Sbjct: 144 LIPAVIFFGLGNVPGLI-----ATIVFAMPPGIRLTDLGIRQ----VPTELVEVADAFGS 194 Query: 175 SGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWFFVVASEMI 213 + QK + +P + M G+ +M+S+S VV + MI Sbjct: 195 TPMQKLVKVQLPVALQTIMTGINQVIMLSLS----MVVIAAMI 233 >gi|289426680|ref|ZP_06428409.1| ABC transporter, permease protein [Propionibacterium acnes J165] gi|289160175|gb|EFD08350.1| ABC transporter, permease protein [Propionibacterium acnes J165] gi|313806536|gb|EFS45043.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA2] gi|313817403|gb|EFS55117.1| ABC transporter, permease protein [Propionibacterium acnes HL046PA2] gi|313821854|gb|EFS59568.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA1] gi|313824252|gb|EFS61966.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA2] gi|313826616|gb|EFS64330.1| ABC transporter, permease protein [Propionibacterium acnes HL063PA1] gi|314926668|gb|EFS90499.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA3] gi|314961128|gb|EFT05229.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA2] gi|314980391|gb|EFT24485.1| ABC transporter, permease protein [Propionibacterium acnes HL072PA2] gi|314987231|gb|EFT31322.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA2] gi|314988879|gb|EFT32970.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA3] gi|315082507|gb|EFT54483.1| ABC transporter, permease protein [Propionibacterium acnes HL027PA2] gi|315086220|gb|EFT58196.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA3] gi|315087803|gb|EFT59779.1| ABC transporter, permease protein [Propionibacterium acnes HL072PA1] gi|327333456|gb|EGE75176.1| ABC transporter, permease protein [Propionibacterium acnes HL096PA3] gi|327445522|gb|EGE92176.1| ABC transporter, permease protein [Propionibacterium acnes HL013PA2] gi|328758764|gb|EGF72380.1| ABC transporter, permease protein [Propionibacterium acnes HL020PA1] Length = 252 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 24/41 (58%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 F M QS ++P +LEE +R + WQ FW + VP PGL Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGL 215 >gi|241765783|ref|ZP_04763725.1| binding-protein-dependent transport systems inner membrane component [Acidovorax delafieldii 2AN] gi|241364321|gb|EER59466.1| binding-protein-dependent transport systems inner membrane component [Acidovorax delafieldii 2AN] Length = 278 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV I+A+++ +P+GI +G I + +PF PA+ F PL++ Sbjct: 86 MTVWRVFGGFILAAVVAVPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIG 145 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+IF G+ + I V D E A + +++PG Sbjct: 146 ETQ-----KILVIFIGSVFQITLMVAVTVGGARRDLVEAAYTLGAGHKGIVTRVLIPGAA 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 201 PEIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 237 >gi|218260367|ref|ZP_03475723.1| hypothetical protein PRABACTJOHN_01386 [Parabacteroides johnsonii DSM 18315] gi|218224558|gb|EEC97208.1| hypothetical protein PRABACTJOHN_01386 [Parabacteroides johnsonii DSM 18315] Length = 464 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 14/165 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LR M ISL+ + L K + + P+L IM++IP++ F+ +++ Sbjct: 61 TVLRGTIGMSISLMAAVGVSFLFYKCEWMYELFRPLLAIMRAIPVISFILLALIF----- 115 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + AE + F + +T ++ + + + ++L ++R F++ W + + P Sbjct: 116 ----LNAESIPLIIAFLTMFPLLTENLTKGIRSRRKELSIMARQFKIGRWNRLTQVTYPQ 171 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 P L + ++ GW ++ E++ PGIG + A Sbjct: 172 LKPFLYSGLASALGFGWRAIIMGEVLAQCS-----PGIGGEMKQA 211 >gi|325526214|gb|EGD03845.1| putative ABC transporter system permease [Burkholderia sp. TJI49] Length = 258 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 15/128 (11%) Query: 79 SLLFTFVYATLA-AKSRRLGMVLVP----ILDIMQSIPILGFLTFTV-VYFMNLYPGKVI 132 SL+ T V T A +R G +P I+DI Q+ P + L V L P +I Sbjct: 76 SLIGTLVAVTAGIAVTRPSGADFLPVARSIVDIGQTFPPVAVLALAVPAVGFGLKP-VLI 134 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 L + +F S + L ++PRD+ + +R +SGWQ+ + +P + P + Sbjct: 135 ALVLYGLLPVFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLVSVELPLAFPVI 186 Query: 193 VWNMMMSM 200 V + +++ Sbjct: 187 VNGIRLAV 194 >gi|322514924|ref|ZP_08067939.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein [Actinobacillus ureae ATCC 25976] gi|322119112|gb|EFX91266.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein [Actinobacillus ureae ATCC 25976] Length = 288 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVRVTIPL 205 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P IG+ I + A+ A+ Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLIGNIIKSLFLNTNQFALGSAV 259 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 260 SIALTVLMALMLY--VYYRANKLLNKKVELE 288 >gi|314931272|gb|EFS95103.1| ABC transporter, permease protein [Propionibacterium acnes HL067PA1] Length = 177 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 24/41 (58%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 F M QS ++P +LEE +R + WQ FW + VP PGL Sbjct: 56 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGL 96 >gi|317053918|ref|YP_004117943.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] gi|316951913|gb|ADU71387.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 259 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 21/37 (56%) Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + +P+++ E R+ WQ+FW L VP + PGL Sbjct: 147 AFAGVPKEILEAGRTLGARPWQRFWRLSVPIAAPGLA 183 >gi|253578431|ref|ZP_04855703.1| binding-protein-dependent transport system inner membrane component [Ruminococcus sp. 5_1_39B_FAA] gi|251850749|gb|EES78707.1| binding-protein-dependent transport system inner membrane component [Ruminococcus sp. 5_1_39BFAA] Length = 240 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 N ++++S LM+ I N++ G + E+A F + R RYI + + PY+ Sbjct: 108 NLSVFISFLMVLPV---IYTNILEGIRQTDSKILEMAKVFQVNPGRKIRYIYVSQVLPYF 164 Query: 507 VTGAITACGGAWNASIVSEV 526 ++ + G W A + +EV Sbjct: 165 LSACRLSLGMCWKAGVAAEV 184 >gi|148272971|ref|YP_001222532.1| putative anion ABC transporter permease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830901|emb|CAN01845.1| putative anion ABC transporter, permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 287 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 8/169 (4%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P D+V + L QY + + R+L + V + SR ++L P Sbjct: 75 PLDVVRAGAQLAEQGILGQYVAISLQRVLLGFALGATVGLVLGAVVGLSRVGRLLLAPTA 134 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 +++P L ++ +++ KV + A+F ++T+ + +L ++ Sbjct: 135 GAFRTVPSLAWVPLLLLWMGINEDSKVTLVAIGAMFPVYTT--------VAGALRHVDPH 186 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L EV R+F L+ + +P +P +V + ++++ W F+VA+E++ Sbjct: 187 LVEVGRAFGLTRIPLLVTVQLPAVLPAVVSGLRLALAQSWLFLVAAELL 235 >gi|146276801|ref|YP_001166960.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145555042|gb|ABP69655.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 266 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 15/190 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + T R L I L SR L ++ P + + + ++ ++F Sbjct: 73 AETLKRNLGGFAIGAGVGVALGALLGTSRLLARIIGPTVVAHRQTALFAWVPLIAMWFGG 132 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GK+ +AA F V N ++ + +P L+E++ + R S Q ++ + Sbjct: 133 GDQGKIAFVAMAA----FQPTVINT----WRGIAGVPGGLQELAAALRFSRLQYLRHVAL 184 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILY 243 P ++P + + ++ W V SE+ + PG+G + + E DLL ++ Sbjct: 185 PAALPQIFTGLHAALIYAWLATVGSELFLN-----ITPGLGGRLIEGSQLFEMDLLFLVI 239 Query: 244 AMLTMLGVIF 253 + ++G+++ Sbjct: 240 VIFGLVGLVY 249 >gi|146277962|ref|YP_001168121.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145556203|gb|ABP70816.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 266 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 4/113 (3%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A ++ IP+G +G + F LAA P F PL++ + ++++ Sbjct: 84 AILVGIPLGALMGMVRLFGRTVDVFVFALAATPRVAFIPLIILLLGLGI----EAKAMIV 139 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 G I+ N AG A + E+A S + R +++LPG P+ V G Sbjct: 140 FLGAVMPIILNTYAGVQARDEELIEMARSTGASATRIQIHVVLPGALPFLVVG 192 >gi|314969545|gb|EFT13643.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA1] Length = 252 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 24/41 (58%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 F M QS ++P +LEE +R + WQ FW + VP PGL Sbjct: 175 FLMRQSFMSLPAELEEAARLDGCNPWQTFWRVMVPVVKPGL 215 >gi|307946907|ref|ZP_07662242.1| binding-protein-dependent transport systems inner membrane component [Roseibium sp. TrichSKD4] gi|307770571|gb|EFO29797.1| binding-protein-dependent transport systems inner membrane component [Roseibium sp. TrichSKD4] Length = 257 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 29/175 (16%) Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI- 139 LF+FV A L VP++ + IP + L V++F G G++ A I Sbjct: 92 LFSFVRAGL-----------VPLIAAIFPIPKIALLPLFVIWF-----GIDEGSKYALIA 135 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F FT V + Y ++ N+ R L + +SF L+ + + +P +MPG++ + +S Sbjct: 136 FGTFTPTV----VATYGAVDNVDRTLIRMGQSFGLTWFSIVRKIVLPGAMPGILSGLRIS 191 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI 252 ++ +VA+EM+ G GIG+YI A ++ + D L +L++LGV+ Sbjct: 192 LAIAIILLVAAEML--GAEY----GIGAYILQAGSLYDLDRLFAGVVILSVLGVL 240 >gi|256393833|ref|YP_003115397.1| binding-protein-dependent transporters inner membrane component [Catenulispora acidiphila DSM 44928] gi|256360059|gb|ACU73556.1| binding-protein-dependent transport systems inner membrane component [Catenulispora acidiphila DSM 44928] Length = 271 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 8/137 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +++ ++S +++ L + YA L+ + R +G V ++ +I I + YFM + Sbjct: 74 SSIAIVSHLILCSLGGYAYARLSFRGRTVGFV-----TLVATIMIPTQMLMIPTYFMFTH 128 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G + L A F F + + + F M Q ++P+DLEE R L+ + F+ + +P Sbjct: 129 LGLI--DTLGAAFVPFLTSAFGV-FLMRQFFLSLPKDLEEAGRIDGLTTFGVFFRIVLPL 185 Query: 188 SMPGLVWNMMMSMSGGW 204 + P L + ++ W Sbjct: 186 ARPALATLAVFTLLNSW 202 >gi|219870515|ref|YP_002474890.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Haemophilus parasuis SH0165] gi|219690719|gb|ACL31942.1| ABC-type nitrate/sulfonate/bicarbonate transport permease [Haemophilus parasuis SH0165] Length = 245 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 35/174 (20%), Positives = 78/174 (44%), Gaps = 10/174 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R++V + +A + IP+G+ +G + P Q L + P+VV + Sbjct: 64 RIIVGLTVALLCGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLGV----G 119 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 +L + L+ F W ++ + +G + + ++ S + +II+P I + +T Sbjct: 120 DLPVYFLIAFAAIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPAITGHILT 179 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G + G AW + E+ GLG +I ++ ++ ++ E++ V+++ Sbjct: 180 GLRVSLGIAWVVLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAVIVI 227 >gi|209809281|ref|YP_002264819.1| putative binding protein-dependent transport system, membrane component [Aliivibrio salmonicida LFI1238] gi|208010843|emb|CAQ81242.1| putative binding protein-dependent transport system, membrane component [Aliivibrio salmonicida LFI1238] Length = 272 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 21/175 (12%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+PIL Q+IP+ +++ KV+ A L F + T Y L Sbjct: 113 LLPILIASQAIPVFAIAPILMLWLGYGIASKVVMAALIIFFPVTTC--------CYDGLR 164 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 N P +++ + S WQ Y+ +P ++P L + +++ VVA VVG+ V Sbjct: 165 NTPSGYLDLAHTMGASKWQLLKYVRLPAALPALASGIRVAV------VVAPIGAVVGEWV 218 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-----FLYDQLLFRPMIVWSNK 269 G+G Y+ L + ++ ++A L +L + FL D +L + +I W + Sbjct: 219 GSSEGLG-YLMLQANARMMIDEMFAALFILAALSVSLYFLAD-VLIQKLIPWQHD 271 >gi|15673433|ref|NP_267607.1| betaine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|7188801|gb|AAF37879.1|AF234619_2 OpuABC [Lactococcus lactis] gi|12724442|gb|AAK05549.1|AE006375_3 betaine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|326406928|gb|ADZ63999.1| glycine betaine/carnitine/choline ABC transporter, permease and substrate-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 573 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS + ++ PILD MQ++P +L V +F G V G + IFA+ T ++ N Sbjct: 120 AKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + + +L E + SF + QK + L P + M G+ +M+++S Sbjct: 177 L------GIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ D+ Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLAAVQSADI 252 >gi|254253737|ref|ZP_04947054.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] gi|124898382|gb|EAY70225.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] Length = 248 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 10/182 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV V + A ++ +P G IG + + P Q L + P+ V + Sbjct: 54 ATSVKRVAVGLAWALVVGVPAGFAIGRLRWLEQMLSPAIQFLRMVSPLSWMPIAVMSLGV 113 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L+ F W +L N AG + + E+ S T +I +PGI Sbjct: 114 ----GDRAVYFLLAFSAVWPLLMNTAAGVAQLDRRWIELGDSLAATRIEMIWHIYVPGIA 169 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + +TG A G W + +E+ + GLG I ++ ++ ++ E+ +L++ Sbjct: 170 AHVLTGVRLAIGVLWIVLVPAEMLG------VSAGLGYLILDTRDRLAYSELTAVILVIG 223 Query: 564 CF 565 Sbjct: 224 AL 225 >gi|107028306|ref|YP_625401.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116686300|ref|YP_839547.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|105897470|gb|ABF80428.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116652015|gb|ABK12654.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 324 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 10/176 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S I +P+GI G ++ +PF + PA F L+V+ + Y P + Sbjct: 140 VISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---A 195 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + + E A + + ++++PG+ P Sbjct: 196 IIVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILL 255 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW IV+E+ ++G+ YI++ F V +L++ L + Sbjct: 256 GWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGIIGLGTD 305 >gi|302540955|ref|ZP_07293297.1| aliphatic sulfonates ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302458573|gb|EFL21666.1| aliphatic sulfonates ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 270 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 32/71 (45%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ G +++ NV AG E +S + W R+++LPG P +TG + Sbjct: 141 LIALGVTFHLYLNVYAGIRGVDAQLIEAGNSLGLGRWGLIRHVVLPGALPGAMTGLRYSL 200 Query: 515 GGAWNASIVSE 525 AW A + E Sbjct: 201 ATAWLALVFGE 211 >gi|281492007|ref|YP_003353987.1| glycine betaine/carnitine/choline ABC transporter permease/substrate-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281375716|gb|ADA65220.1| Glycine betaine/carnitine/choline ABC transporter, permease and substrate-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 573 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 25/153 (16%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 AKS + ++ PILD MQ++P +L V +F G V G + IFA+ T ++ N Sbjct: 120 AKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFF---GIGVVPGVFASVIFALPPTVRMTN 176 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS----MPGLVWNMMMSMSGGWF 205 + + + +L E + SF + QK + L P + M G+ +M+++S Sbjct: 177 L------GIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALS---- 226 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ ++I PG+G + A++ D+ Sbjct: 227 ------MVVIA-SMIGAPGLGRGVLAAVQSADI 252 >gi|269125624|ref|YP_003298994.1| binding-protein-dependent transport systems inner membrane component [Thermomonospora curvata DSM 43183] gi|268310582|gb|ACY96956.1| binding-protein-dependent transport systems inner membrane component [Thermomonospora curvata DSM 43183] Length = 287 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 8/110 (7%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 L ++++IP + + +V+F IG E + I I + ++ + + Y + I R Sbjct: 129 LQMLRTIPFIAMVPLFIVWFG-------IGEE-SKIALIVGASIFPVYLNTYHGIRGIDR 180 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L E++++F LS Q + VP +MP ++ + + +VA+E I Sbjct: 181 RLIELAQTFELSRRQVIGLIVVPLAMPQILVGLRYAAGTALLALVAAEQI 230 >gi|225020644|ref|ZP_03709836.1| hypothetical protein CORMATOL_00651 [Corynebacterium matruchotii ATCC 33806] gi|224946590|gb|EEG27799.1| hypothetical protein CORMATOL_00651 [Corynebacterium matruchotii ATCC 33806] Length = 347 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 137 AAIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 AA A+ + VW M + L IPRD+ E ++ + WQ+FW + +P P L Sbjct: 172 AARLAVIIADVWKTTPFMALLILAGLQMIPRDVYEAAKVDGANAWQQFWKITLPLVKPAL 231 Query: 193 V 193 + Sbjct: 232 M 232 >gi|170738807|ref|YP_001767462.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168193081|gb|ACA15028.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 288 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 4/141 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ IA++ + +G+ IG+ + ++P Q+L P + PL + Sbjct: 92 SLSRVLAGYAIAALCGVGLGVAIGWWRLVERTVEPTLQMLRPIPPVSWIPLAIIWFGIAD 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P ++L L F + IL N I G + + + + + I+LP P Sbjct: 152 -RPAIFLVFLGAF---FPILMNTIHGVRSVDRNLIRAGAMMGASERQLLARIVLPAALPA 207 Query: 506 YVTGAITACGGAWNASIVSEV 526 V+G A G AW ++ +E+ Sbjct: 208 IVSGLRIAIGSAWMLTVTAEM 228 >gi|146309335|ref|YP_001189800.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] gi|145577536|gb|ABP87068.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] Length = 264 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFRQVILPGALPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +L+ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYALLGKLADIAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVWLRWHPAY 257 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 21/155 (13%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F KV L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDEAAKVFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISASS 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVI 252 GIG Y+A+ +E D L +LYA+L L I Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAILLYALLGKLADI 241 >gi|145224434|ref|YP_001135112.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium gilvum PYR-GCK] gi|315444766|ref|YP_004077645.1| carbohydrate ABC transporter membrane protein 1, CUT1 family [Mycobacterium sp. Spyr1] gi|145216920|gb|ABP46324.1| carbohydrate ABC transporter membrane protein 1, CUT1 family [Mycobacterium gilvum PYR-GCK] gi|315263069|gb|ADT99810.1| carbohydrate ABC transporter membrane protein 1, CUT1 family [Mycobacterium sp. Spyr1] Length = 310 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMT----FSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +NL G +AIF I S++W T + L +P D++E ++ + WQ+ Sbjct: 157 LNLTDFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQVPEDMQEAAKVDGATAWQR 216 Query: 180 FWYLGVP 186 W + +P Sbjct: 217 LWKITLP 223 >gi|304395160|ref|ZP_07377044.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] gi|304357413|gb|EFM21776.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] Length = 271 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 9/159 (5%) Query: 378 YVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 Y++W+ I++ R++ + I+S+I + +GI G P + + PF +++ P P+ Sbjct: 69 YLLWVDTWISLSRLLTGLAISSLIGLCIGIAAGVFPMTRAALSPFMTVVSMIPPLALLPM 128 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + L+ +L++ G + ++ A P + A + W Sbjct: 129 LFIVFGLDELSK----VMLIVIGITPMLARDLEHRAREIPAELFIKAQTLGANSWTVVLR 184 Query: 497 IILPGIFPYYVTGAITACGGAW----NASIVSEVASWGH 531 ++LP + +T G AW +A +S A G+ Sbjct: 185 VVLPQLLSRLITSLRLLLGSAWLFLISAEAISATAGLGY 223 >gi|170693015|ref|ZP_02884176.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gi|170142013|gb|EDT10180.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 292 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 10/143 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGK 130 +L ++ FV +LA S R+G L+ +L M +P + L +++F L G Sbjct: 99 LLRGYLLGAALAFVLTSLAV-STRVGRDLLSMLTAMFNPLPSIALLPIALLWF-GLGTGS 156 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ F + S +W + + Y ++P L R++ L+G + + +P ++P Sbjct: 157 LL-------FVLVHSVLWPLALNTYSGFQSVPATLRMTGRNYGLTGMRHVLLILMPAALP 209 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 ++ + + + W ++A+E++ Sbjct: 210 SILAGLRVGWAFAWRTLIAAELV 232 >gi|91778565|ref|YP_553773.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691225|gb|ABE34423.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 281 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 34/180 (18%), Positives = 79/180 (43%), Gaps = 10/180 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + ++ A ++ +P+G IG + + + P Q L + P+ V + Sbjct: 88 SLRRIAIGLLWALVVGVPLGFLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGV-- 145 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + L+ F W ++ + AG + + ++ S T Y+ +PGI + Sbjct: 146 --GDRAVYFLLAFAAVWPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWYVYVPGIAAH 203 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G W + +E+ ++GLG I ++ ++ ++ E+ +L++ Sbjct: 204 VLTGVRLAIGILWIVLVPAEMLG------VSSGLGYLILDTRDRLAYSELTAVILVIGAL 257 >gi|134291004|ref|YP_001114773.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] gi|134134193|gb|ABO58518.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] Length = 324 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 10/168 (5%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S I +P+GI G ++ +PF + PA F L+V+ + Y P + Sbjct: 140 VISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---A 195 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + V E A + + ++++PG+ P Sbjct: 196 IIVIGTLFQQVLIVANTTRKLEYGLFEAAMTLGTNKLKLLTHVVIPGVLPDLYRDQRILL 255 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G AW IV+E+ ++G+ YI++ F V +L++ Sbjct: 256 GWAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMI 297 >gi|313204231|ref|YP_004042888.1| phosphate ABC transporter membrane protein 1, phot family [Paludibacter propionicigenes WB4] gi|312443547|gb|ADQ79903.1| phosphate ABC transporter membrane protein 1, PhoT family [Paludibacter propionicigenes WB4] Length = 396 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 12/193 (6%) Query: 73 LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNL 126 L A+++SL F A A+ + R+ +L PI++++ IP + GF V+ + L Sbjct: 183 LGAILLSLPFGIAVAVYLAEIATMRVRNILKPIIELLAGIPSVVYGFFGLVVIVPFLQKL 242 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + V LA + + + ++ +PR ++E S + + WQ + + +P Sbjct: 243 FHLPVGETALAGSVVLGIMALPTIITVAEDAMRTVPRAMKEASLALGATHWQTIYKVIIP 302 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI------PLPGIGSYIALAIKEQDLLA 240 ++ G+ ++ + +A M+ VI P+ I + IA + E + Sbjct: 303 YAKSGITSAAVLGIGRAIGETMAVLMVTGNAAVIPHTLLEPVRTIPATIAAELGEVSAGS 362 Query: 241 ILYAMLTMLGVIF 253 Y L MLGVI Sbjct: 363 GHYQALFMLGVIL 375 >gi|226362541|ref|YP_002780319.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226241026|dbj|BAH51374.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 276 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 10/147 (6%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+G+ +G ++ P L + P V PL+V + +++L IF Sbjct: 99 VPIGLLLGSNRRLNHAFDPIINALYSTPILVLTPLLVIWFGLGMGSKIANVAILAIF--- 155 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 ++ N+I G A SF +G ++ + P + P+++TG A G A Sbjct: 156 -PVIINMIEGVRTVDPVLLRAARSFGASGLSIYKDVTFPSVIPFFITGVRLAIGKGMIAV 214 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTE 548 +V E + T G+G I E Sbjct: 215 VVGEYIA------ATEGIGYRIRADAE 235 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 12/147 (8%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 M I+L L +RRL PI++ + S PIL V++F G +G+ Sbjct: 90 GMAIALGLGVPIGLLLGSNRRLNHAFDPIINALYSTPILVLTPLLVIWF-----GLGMGS 144 Query: 135 ELA--AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 ++A AI AIF + +M + + + L +RSF SG + + P +P Sbjct: 145 KIANVAILAIFP-----VIINMIEGVRTVDPVLLRAARSFGASGLSIYKDVTFPSVIPFF 199 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTV 219 + + +++ G VV E I + + Sbjct: 200 ITGVRLAIGKGMIAVVVGEYIAATEGI 226 >gi|218690278|ref|YP_002398490.1| putative ABC transporter permease [Escherichia coli ED1a] gi|218427842|emb|CAR08755.2| putative transporter subunit: permease component of ABC superfamily [Escherichia coli ED1a] Length = 385 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GKVIGAELA---AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK+ A + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGIGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|84515313|ref|ZP_01002675.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] gi|84510596|gb|EAQ07051.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] Length = 277 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 14/135 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +LSA V+ + AA +L +VP+LD+MQ++P +L +V+F + + PG Sbjct: 100 VLSACVVCMGVGVPIGIAAAHRPKLYRAMVPVLDLMQTLPTFVYLIPAIVFFGIGMVPGL 159 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + A + + + + +T Y + + P L E +++F + Q + + +P + P Sbjct: 160 I-----ATVIFVLPAPI-RLT---YLGVASTPTALLEAAQAFGATKRQILFKVELPSATP 210 Query: 191 ----GLVWNMMMSMS 201 GL +M+S+S Sbjct: 211 QIMAGLNQTIMLSLS 225 >gi|56964647|ref|YP_176378.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease [Bacillus clausii KSM-K16] gi|56910890|dbj|BAD65417.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease [Bacillus clausii KSM-K16] Length = 265 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 14/143 (9%) Query: 77 VISLLFTFVYATLAAK----SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 V+ L V TL A S+RL +L P L I+ S+P + +V + Sbjct: 81 VLGFLLGTVAGTLLAALLWWSKRLAEILDPFLVILNSMPKVAIGPILIVG---------L 131 Query: 133 GAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 G + ++ A+ V T +Y + + + +V ++F S WQ+F ++ P ++P Sbjct: 132 GPNMTSVIAMGMLVSVIITTMVVYTAFKEVDGNYLKVLQTFSASKWQQFRHVVYPATIPV 191 Query: 192 LVWNMMMSMSGGWFFVVASEMIV 214 +V + M++ W V+ E +V Sbjct: 192 IVSTLKMNVGLSWVGVIVGEFLV 214 >gi|311106606|ref|YP_003979459.1| binding-protein-dependent transporter inner membrane component family protein 39 [Achromobacter xylosoxidans A8] gi|310761295|gb|ADP16744.1| binding-protein-dependent transport system inner membrane component family protein 39 [Achromobacter xylosoxidans A8] Length = 257 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547 T W + + LP + P +TGA A G AW A I +E + +G GLG +A S Sbjct: 164 TRWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 E V+ +L++ +++F+ L Sbjct: 218 EIADMTGVMTNILVIAVLAALIDQFVLENL 247 >gi|297544878|ref|YP_003677180.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842653|gb|ADH61169.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 299 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 4/133 (3%) Query: 93 SRRLGM-VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +++LG +L P ++I IP + G++ TV V F++ + G + + LA I + + Sbjct: 108 AKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVPFISKHFGGLGFSLLAGILVLTVMTLP 167 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +T ++ ++P ++ E S + + WQ ++ +P + PG++ +++ ++ + + Sbjct: 168 TITSVSTDAIKSLPVEIREASYALGATRWQTIRHVILPAAKPGILTAIVLGLARAFGEAL 227 Query: 209 ASEMIVVGDTVIP 221 A +M++ VIP Sbjct: 228 AVQMVIGNRPVIP 240 >gi|239627742|ref|ZP_04670773.1| transport protein [Clostridiales bacterium 1_7_47_FAA] gi|239517888|gb|EEQ57754.1| transport protein [Clostridiales bacterium 1_7_47FAA] Length = 280 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 22/165 (13%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF-AIFTSQVWNMTF 152 +R+ + + P+ D+++ +P + ++ +++F G +GA+ A IF + F V N Sbjct: 115 KRIDLFVTPLFDLVRPVPTIAWIPLMILWF-----GIGLGAKAAIIFVSAFIPCVINSYA 169 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Q+ P L V+++F S + + + +P +MP + + +S+ W + A+EM Sbjct: 170 GIKQTK---PVHLW-VAQTFGASRTKMLFTVAIPTAMPLIFTGLRISLQAAWTTLCAAEM 225 Query: 213 IVVGDTVIPLPGIGSYIAL--AIKEQDLLAILYAMLTM--LGVIF 253 + G+G I L ++ DL I+ MLT+ +G IF Sbjct: 226 LAANK------GLGYMIQLNRSLARADL--IIVGMLTIGFIGTIF 262 >gi|126435145|ref|YP_001070836.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. JLS] gi|126234945|gb|ABN98345.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. JLS] Length = 279 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%) Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G D +VA S + + R+I++P + P+ +TG + G A ++++E+ + Sbjct: 173 GVQEIDRDLLDVAKSLRASRLQTLRWIVVPSLVPWLITGLRLSIGIALIGAVIAELIAAS 232 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GLG YI S+ V G+ ++ +AL + L Sbjct: 233 Q------GLGYYIKYSSNLLDVTGVFAGLAVITVVAIALEQLL 269 >gi|330814338|ref|YP_004358577.1| L-proline glycine betaine ABC transport system permease protein ProW [Candidatus Pelagibacter sp. IMCC9063] gi|327487433|gb|AEA81838.1| L-proline glycine betaine ABC transport system permease protein ProW [Candidatus Pelagibacter sp. IMCC9063] Length = 278 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 18/144 (12%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+ ++ ++ ++LF V A++S +L PILD+MQ+IP +L V+ Sbjct: 93 EETMTTMAMIITAVLFCSVIGIPIGIAASRSNLFEKILRPILDVMQTIPSFVYLIPVVML 152 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + AI + V +T L + + ++ +R+ + WQ + Sbjct: 153 FGIGITPGVI------AIIIFSIAPVIRLT---NLGLRQVEKRFKDAARALGCNKWQVLY 203 Query: 182 YLGVPFS----MPGLVWNMMMSMS 201 + +P + M G+ +M+S+S Sbjct: 204 KIELPLALKTIMAGVNQTLMLSLS 227 >gi|282856693|ref|ZP_06265959.1| inner membrane protein [Pyramidobacter piscolens W5455] gi|282585458|gb|EFB90760.1| inner membrane protein [Pyramidobacter piscolens W5455] Length = 300 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 16/148 (10%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L++++I+L+ L + S +L P+LD MQ++P+ +L ++ F G Sbjct: 103 VLASVMIALVIGIPIGILISGSDLANKMLRPVLDTMQTMPVFVYLIPALLLFGT---GNA 159 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP- 190 G I+A+ V +T + + +++ E +R+F + WQ + + +P + P Sbjct: 160 SGVIATVIYAVV--PVIRLT---SLGIRQVDKEVVEAARAFGSTRWQTLFKVQIPQAKPT 214 Query: 191 ---GLVWNMMMSMSGGWFFVVASEMIVV 215 G+ +MM+M+ VV + MI V Sbjct: 215 IMAGVNQTLMMAMA----MVVTTSMIGV 238 >gi|269215401|ref|ZP_06159255.1| putative ABC transporter transmembrane subunit, permease [Slackia exigua ATCC 700122] gi|269130888|gb|EEZ61963.1| putative ABC transporter transmembrane subunit, permease [Slackia exigua ATCC 700122] Length = 390 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 33/162 (20%), Positives = 76/162 (46%), Gaps = 14/162 (8%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + ++S A L+ +R + + P++ ++++IP++ + +++ Sbjct: 190 RIAAGFLLSFFVGISLALLSHHARIVRDFVEPVISLLRTIPVVSIIIMLLIW-------- 241 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +G ++ ++ F + + +M L N+ + E++R +RL W+ F Y+ P MP Sbjct: 242 -VGNQMLTVYLSFLIVLPIIYTNMLAGLENVDPRMLEMARCYRLGWWRTFMYVYRPAFMP 300 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 L + +S+ W + +E++ P P IG +A A Sbjct: 301 FLKSSCRLSLGMSWKAGIMAEVLAT-----PKPSIGKEMAQA 337 >gi|289578658|ref|YP_003477285.1| phosphate ABC transporter inner membrane subunit PstC [Thermoanaerobacter italicus Ab9] gi|289528371|gb|ADD02723.1| phosphate ABC transporter, inner membrane subunit PstC [Thermoanaerobacter italicus Ab9] Length = 299 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 4/133 (3%) Query: 93 SRRLGM-VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW 148 +++LG +L P ++I IP + G++ TV V F++ + G + + LA I + + Sbjct: 108 AKKLGQKILQPAIEIFVGIPSVVYGWVGLTVLVPFISKHFGGLGFSLLAGILVLTVMTLP 167 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +T ++ ++P ++ E S + + WQ ++ +P + PG++ +++ ++ + + Sbjct: 168 TITSVSTDAIKSLPVEIREASYALGATRWQTIRHVILPAAKPGILTAIVLGLARAFGEAL 227 Query: 209 ASEMIVVGDTVIP 221 A +M++ VIP Sbjct: 228 AVQMVIGNRPVIP 240 >gi|148243573|ref|YP_001228730.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synechococcus sp. RCC307] gi|147851883|emb|CAK29377.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synechococcus sp. RCC307] Length = 272 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 27/133 (20%), Positives = 59/133 (44%), Gaps = 4/133 (3%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A+++ +P+GI +G P I + +P +L PA F PL+ + Y + ++L+ Sbjct: 93 LATLVAVPLGICMGVYPAICALCEPLIAMLRYMPAAAFIPLL---IIYLGIGEEPKIALI 149 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + GT ++ + V+ P + E + G + ++ P + Sbjct: 150 FL-GTVYFNVLMVMDAVKFVPKELIETTLTLGGRGRQVLVQVVARYSLPSIIDTLRINIA 208 Query: 516 GAWNASIVSEVAS 528 +WN +V+E+ + Sbjct: 209 TSWNLVVVAELVA 221 >gi|121535084|ref|ZP_01666901.1| phosphate ABC transporter, inner membrane subunit PstC [Thermosinus carboxydivorans Nor1] gi|121306334|gb|EAX47259.1| phosphate ABC transporter, inner membrane subunit PstC [Thermosinus carboxydivorans Nor1] Length = 297 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 5/127 (3%) Query: 96 LGMVLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 L ++ P D+ +IP + GF+ TV V F+ + G G L A I + Sbjct: 110 LRQIMRPATDLYVAIPSVVYGFVGLTVLVPFIRVQFGVNTGFGLLAAAVILAIMILPTII 169 Query: 153 SMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 S+ + ++ +PR LEE S + + WQ + +P ++PG++ +++++M+ +A + Sbjct: 170 SISEDAIRAVPRALEEGSLALGATRWQTITGVILPAALPGILTSVILAMARAVGETMAVQ 229 Query: 212 MIVVGDT 218 M V+G+T Sbjct: 230 M-VIGNT 235 >gi|187924082|ref|YP_001895724.1| binding-protein-dependent transporters inner membrane component [Burkholderia phytofirmans PsJN] gi|187715276|gb|ACD16500.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 290 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G A P + EV+ +F + W+ R +ILP P TG A +W A++ +E Sbjct: 176 GIHAVPRAYIEVSRAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAE----- 230 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ++ + +G+G + + +E+ V+ GV+++ ALN Sbjct: 231 YLLVAGSGIGNTLIDGSEQFRMDLVLFGVIVIGVTGWALN 270 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 13/174 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 ++ +L + S + R S VI L + ++ SR ++ P D + I + + Sbjct: 83 IESGALLKALSASLAREASGFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAW 142 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + V+F KV+ LAA+ + T + +PR EVSR+FR S Sbjct: 143 IPLISVWFGLGDVAKVVFLSLAALLPV--------TAHTCDGIHAVPRAYIEVSRAFRYS 194 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 WQ + +P ++P + + +++ W + +E ++V + GIG+ + Sbjct: 195 RWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGS-----GIGNTL 243 >gi|258512805|ref|YP_003186239.1| binding-protein-dependent transport systems inner membrane component [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479531|gb|ACV59850.1| binding-protein-dependent transport systems inner membrane component [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 260 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 8/169 (4%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P +VD + L Y + + R S I F TL S++ +L + Sbjct: 42 PLGVVDAALMLARQGVLWTYIATSAARAFSGFFIGATVGFTLGTLNGISKKASRLLDTPI 101 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++++IP L + +V+F IG E A +F + M + Y + ++ Sbjct: 102 QMIRTIPHLALVPLVIVWFG-------IG-EQAKVFLVALGTAIPMYMNTYFGIQSLDPG 153 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 L E++R +R S + F + +P ++P ++ + S+ W ++ +E I Sbjct: 154 LLEMARVYRFSRLKMFGRVILPGALPSVLSGVRYSLGVMWVTLIVAETI 202 >gi|229822266|ref|YP_002883792.1| binding-protein-dependent transport systems inner membrane component [Beutenbergia cavernae DSM 12333] gi|229568179|gb|ACQ82030.1| binding-protein-dependent transport systems inner membrane component [Beutenbergia cavernae DSM 12333] Length = 317 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 8/125 (6%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +T L L+ + I+++ YA + ++S VL P I+Q+IPIL + ++ Sbjct: 119 GQTVLVALAGLAIAVVLGLAYAVVMSQSVWAERVLYPYAVILQTIPILALVPLIGIWLGY 178 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +P +++ + A+F + ++ ++ + S DL ++++ R WQ+ L Sbjct: 179 GFPARIVVCVIIALFPMISNTLFGLL-----SASPAAHDLFTLNKATR---WQRLGKLQF 230 Query: 186 PFSMP 190 P ++P Sbjct: 231 PAALP 235 >gi|145512812|ref|XP_001442317.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409670|emb|CAK74920.1| unnamed protein product [Paramecium tetraurelia] Length = 486 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 10/90 (11%) Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 Y+T A K++ L + ++D+M IL + ++ +N Y ++ AE F ++S Sbjct: 82 YST-AFKNKELDKAIDAVVDVM----ILHVVRDNILGLLNAY---ILVAETYLKFTYYSS 133 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + T++ LC+I D+EEV +SFRL Sbjct: 134 AI--QTYTQLLHLCDICNDVEEVQKSFRLK 161 >gi|254362671|ref|ZP_04978758.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261493213|ref|ZP_05989740.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496542|ref|ZP_05992922.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094290|gb|EDN75154.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261307745|gb|EEY09068.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311063|gb|EEY12239.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 287 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 13/151 (8%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +E+A I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 145 PMRLLNSEIAIIIGLVYILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPL 204 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPG+V ++ + + G F+V ++++ G T P +G+ I + A+ A+ Sbjct: 205 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT----PLVGNIIKSLFLNTNQFALGSAV 258 Query: 246 ---LTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 LT+L + LY + +R + + K LE Sbjct: 259 SIALTILMALMLY--VYYRANKLLNKKVELE 287 >gi|148544777|ref|YP_001272147.1| phosphate ABC transporter, inner membrane subunit PstC [Lactobacillus reuteri DSM 20016] gi|184154128|ref|YP_001842469.1| phosphate ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227363909|ref|ZP_03848013.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|325683116|ref|ZP_08162632.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus reuteri MM4-1A] gi|148531811|gb|ABQ83810.1| phosphate ABC transporter membrane protein 1, PhoT family [Lactobacillus reuteri DSM 20016] gi|183225472|dbj|BAG25989.1| phosphate ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227071062|gb|EEI09381.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|324977466|gb|EGC14417.1| phosphate ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus reuteri MM4-1A] Length = 299 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 18/173 (10%) Query: 60 SLPQYASRTTLRMLS-------AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 +LP A+ ++ +LS A+V+++ T + + A K L P ++++ IP Sbjct: 76 ALPMIATSFSVTLLSGVIALPLALVVAIAITEILPSTAYK------FLQPTIELLVGIPS 129 Query: 112 -ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + G++ TV+ + ++ G G LAA +F + MT S +P+ Sbjct: 130 VVYGYVGLTVIVPFLRRIFGGTGFGI-LAATCVLFLMILPTMTSMTIDSFRAVPKQYRNA 188 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 S + WQ + +P + G++ M+ M+ + +A +M++ TV+P Sbjct: 189 SAGLGATRWQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMP 241 >gi|78063691|ref|YP_373599.1| ABC proline/glycine betaine transporter, inner membrane subunit [Burkholderia sp. 383] gi|77971576|gb|ABB12955.1| ABC proline/glycine betaine transporter, inner membrane subunit [Burkholderia sp. 383] Length = 321 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T ML + V+S+ LA++S L +L+P+LD+MQ++P +L ++ F Sbjct: 95 QTLALMLVSTVLSVAIGVPVGILASRSAWLRRMLLPVLDVMQTLPSFVYLIPVLMLF--- 151 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 GKV A LA I + + Q + D+ E +R+F + WQ + +P Sbjct: 152 GLGKV-PAILATIIYALPPLIRLTDLGIRQ----VDPDVTEAARAFGTTRWQLLVNVQLP 206 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMI 213 + P G+ MM++S VV + MI Sbjct: 207 LARPSIMAGINQTTMMALS----MVVIASMI 233 >gi|257437832|ref|ZP_05613587.1| ABC transporter, permease protein, cysTW family [Faecalibacterium prausnitzii A2-165] gi|257199755|gb|EEU98039.1| ABC transporter, permease protein, cysTW family [Faecalibacterium prausnitzii A2-165] Length = 258 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 26/167 (15%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 WQ +G+ H I LG V VL+ A+ W W+ + + P Sbjct: 55 WQRVGFSAGH---------ILLGFALGVVVSVLLAAAAERWA----WV------DTLLAP 95 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI-AGASAFPNDF 479 QL+ A P F L + VS L+ + +S LM+ +L++ + G + Sbjct: 96 VIQLVKATPVASFIILALVWVSGRSLS--ILISFLMVL----PVLYSAVRTGIESADVQL 149 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E+A FH+ R + I LP I P + G A G W + + +EV Sbjct: 150 LEMAQVFHLPLARRVKAIWLPAILPAFRQGCSVALGICWKSGVAAEV 196 >gi|258404898|ref|YP_003197640.1| binding-protein-dependent transport systems inner membrane component [Desulfohalobium retbaense DSM 5692] gi|257797125|gb|ACV68062.1| binding-protein-dependent transport systems inner membrane component [Desulfohalobium retbaense DSM 5692] Length = 222 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 11/195 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY-HLNPNLWLSL 454 IA++I +PVGI I ++ ++ A + P+ F L++ +S + H + + Sbjct: 31 IATVIGVPVGILITKYETLAKRVINAANIFMTIPSIALFGLMLPMLSLFGHGLGKVPAVI 90 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++ +Q I+ N P ++ W+ + + LP P + G TA Sbjct: 91 ALVLYSQLPIIRNTYVAIKNVPPAVVNAGRGMGMSNWQLLKEVELPIAIPVILAGLRTAA 150 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL- 573 N I + +A++ + GLG YI + ++ +V G +++ F + ++ + Sbjct: 151 --VMNIGI-AAIATF----VGAGGLGVYIQQGIDRVYDEMIVAGAILVSVFAIVVDGGMA 203 Query: 574 --WHPLYLYGTRCLR 586 H L G + R Sbjct: 204 GIEHALTPKGLKIQR 218 >gi|256851607|ref|ZP_05556995.1| maltose ABC transporter permease [Lactobacillus jensenii 27-2-CHN] gi|260661676|ref|ZP_05862588.1| maltose ABC transporter permease [Lactobacillus jensenii 115-3-CHN] gi|282934295|ref|ZP_06339568.1| maltose ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|297205214|ref|ZP_06922610.1| maltose/maltodextrin ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] gi|256615565|gb|EEU20754.1| maltose ABC transporter permease [Lactobacillus jensenii 27-2-CHN] gi|260547733|gb|EEX23711.1| maltose ABC transporter permease [Lactobacillus jensenii 115-3-CHN] gi|281301646|gb|EFA93917.1| maltose ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|297149792|gb|EFH30089.1| maltose/maltodextrin ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] Length = 285 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 30/55 (54%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 IPR ++E + + WQ FW +G+P S P +V+ + + G W + S +I+ Sbjct: 165 TIPRAIDEAAEIDGATKWQVFWNIGLPLSRPMIVYTALTAFIGPWVDFIFSGIIL 219 >gi|239625202|ref|ZP_04668233.1| taurine transport system permease protein tauC [Clostridiales bacterium 1_7_47_FAA] gi|239519432|gb|EEQ59298.1| taurine transport system permease protein tauC [Clostridiales bacterium 1_7_47FAA] Length = 260 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A F IF + N+T + + + L +R S Q F + +P S+P + Sbjct: 126 GESAKYFLIFLAAFSNVTLNAWAGAKAMDYKLVGTARMLGASRTQIFLTVVMPSSVPQIF 185 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + ++MS W VVA+EM+ + G+G I + D++ IL ++ +G++ Sbjct: 186 AGLQIAMSSSWATVVAAEMVRSSE------GVGWIITTGMNNNDIVQILVGIMA-IGIVG 238 Query: 254 LYDQLLFRPM 263 ++ R + Sbjct: 239 FVLAVIMRKL 248 >gi|220932982|ref|YP_002509890.1| binding-protein-dependent transport systems inner membrane component [Halothermothrix orenii H 168] gi|219994292|gb|ACL70895.1| binding-protein-dependent transport systems inner membrane component [Halothermothrix orenii H 168] Length = 272 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 81/155 (52%), Gaps = 21/155 (13%) Query: 69 TLRM-LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNL 126 TL M L++ +++L + LAA++ + ++ P+LD MQ++P +L V++F M + Sbjct: 90 TLSMILTSGIVALSVGVLMGILAARNDYVDRIIRPVLDFMQTMPSFVYLIPAVIFFGMEM 149 Query: 127 YPGKVIGAELAAIFAIFTS-QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 PG + IF++ + ++ N+ + + +++ E +R+F + Q + + + Sbjct: 150 VPGVI----ATVIFSMPPAIRLTNL------GIRQVDKEVIEAARAFGSTPKQILFKVQL 199 Query: 186 PFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 P ++P G+ +M+S+S VV + MI G Sbjct: 200 PLAVPTIMAGINQTIMLSLS----MVVIASMIGAG 230 >gi|317403097|gb|EFV83629.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 251 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 10/99 (10%) Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547 T W + + LP + P +TGA A G AW A I +E + +G GLG +A S Sbjct: 158 TPWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 211 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E V+ +L++ +++F+ L R LR Sbjct: 212 EIADMTGVMTNILVIAVLAALIDQFVLENLK---HRLLR 247 >gi|255318460|ref|ZP_05359693.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter radioresistens SK82] gi|262378690|ref|ZP_06071847.1| nitrate ABC transporter, permease [Acinetobacter radioresistens SH164] gi|255304452|gb|EET83636.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter radioresistens SK82] gi|262299975|gb|EEY87887.1| nitrate ABC transporter, permease [Acinetobacter radioresistens SH164] Length = 314 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 33/197 (16%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP------- 448 I+S+I IP+GI GF +S +PF + PA F L V+ + Sbjct: 132 ISSLIGIPLGILCGFSNKLSQLTEPFIEFFRYLPAPAFGALAVAILGINDAPKIAIIVIG 191 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L+ +L+I T + ++I + F ++ S FH +++P P Sbjct: 192 TLFQQILIIANTTRLVDRSLI--EAGFTLGTNKIKSLFH---------VVIPAAMPEIYR 240 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV-----VLGVLIMC 563 G AW IV+E+ T+G+ +I + +F V ++GV+ + Sbjct: 241 NLRVLLGWAWTYLIVAELIG------STSGITWFITQQARYQNFDNVFAAILIIGVIGLL 294 Query: 564 CFV----LALNRFLWHP 576 C V L F W P Sbjct: 295 CDVILMKLGQRLFKWKP 311 >gi|296128154|ref|YP_003635404.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas flavigena DSM 20109] gi|296019969|gb|ADG73205.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas flavigena DSM 20109] Length = 261 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R V ++++ +I I G IG P + + ++P +L F A LV + Sbjct: 64 SLGRFAVGVLLSIVIGIVAGTAIGATPWLRALLEP---MLEFFRAIPPVVLVPVLMLLLG 120 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ ++ L+++ + G+ W +L N + G + + S+ + G +RY++LP P Sbjct: 121 IDDSMKLAVI-VSGSVWPVLLNTVEGVRGTDPVLVDTSRSYRVRGLLAYRYVVLPAASPQ 179 Query: 506 YVTG 509 + G Sbjct: 180 IMAG 183 >gi|254449529|ref|ZP_05062966.1| ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198263935|gb|EDY88205.1| ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 315 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Query: 111 PILGFLTFTVVYFMNLYPGK--VIGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRD 164 P +G + V +F P +IG A +AI + W T F M L +IP Sbjct: 150 PQIGLFNYVVAFFTGADPASFSMIGDVHLAPWAIVIADTWMWTPFVMLICLAGLRSIPDS 209 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + E + R S W++FW + +P ++P L+ Sbjct: 210 IYEAAECDRASKWRQFWTITIPMALPFLM 238 >gi|172064073|ref|YP_001811724.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gi|171996590|gb|ACB67508.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 255 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%) Query: 69 TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121 TL L + +S L + A A A +R G +P+ +DI Q+ P + L V Sbjct: 62 TLAHLGTVALSSLIGMLIAIAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPA 121 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 L P +I L + IF S + L ++PRD+ + +R +SGWQ+ Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172 Query: 182 YLGVPFSMPGLVWNMMMSM 200 + +P + P +V + +++ Sbjct: 173 SVELPLAFPVIVNGIRLAV 191 >gi|329924498|ref|ZP_08279578.1| putative aliphatic sulfonates transport permease protein SsuC [Paenibacillus sp. HGF5] gi|328940635|gb|EGG36954.1| putative aliphatic sulfonates transport permease protein SsuC [Paenibacillus sp. HGF5] Length = 218 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 8/114 (7%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P +++++P+L + +++F K++ L A F I+ + + + Sbjct: 57 LDPSFQMLRTVPLLSLIPLFILWFGIGEFSKILMISLGAFFPIYVNA--------FLGIR 108 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ L EVSR F+ S Q L VP ++P ++ + +S+ W +V +EM+ Sbjct: 109 SVDAKLYEVSRIFQYSKLQLLIRLIVPAALPNILLGIRLSLGVSWLVLVVAEMM 162 >gi|296125208|ref|YP_003632460.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira murdochii DSM 12563] gi|296017024|gb|ADG70261.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] Length = 264 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 16/208 (7%) Query: 368 VNHFTYQDVLYVIWLG--CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 +NH Q + LG I++FRV+ I ++ I +GI +G ++ + ++PF ++ Sbjct: 56 INHNIGQQTI----LGHVLISIFRVLAGFAIGAVTGIILGISMGVNKYVRAVVRPFFEVF 111 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + P+ + + P ++ ++ GT + N AG+S A Sbjct: 112 RQIPPIAWIPMAILWFGIGEV-PKIF---IIFIGTFVNVTLNAYAGSSQVNPTLIGAAKM 167 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + ++ILP P G +W + +E+ S G+G I Sbjct: 168 LGSNDRDIFLHVILPASVPQIFNGMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIR 221 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ + P+V+ G++ + L L+ + Sbjct: 222 GSDTANIPQVLAGMITIGIVGLLLSSLM 249 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 15/191 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L+ I + + ++ + V+ P ++ + IP + ++ +++F Sbjct: 75 RVLAGFAIGAVTGIILGISMGVNKYVRAVVRPFFEVFRQIPPIAWIPMAILWFG------ 128 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG E+ IF IF N+T + Y + L ++ + F ++ +P S+P Sbjct: 129 -IG-EVPKIFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNDRDIFLHVILPASVP 186 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 + M + S W V+A+EM V G+G I ++ +L M+T +G Sbjct: 187 QIFNGMQVGFSVSWMGVLAAEM------VSSFAGVGWVIIRGSDTANIPQVLAGMIT-IG 239 Query: 251 VIFLYDQLLFR 261 ++ L L R Sbjct: 240 IVGLLLSSLMR 250 >gi|254449487|ref|ZP_05062924.1| glycine betaine/proline ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198263893|gb|EDY88163.1| glycine betaine/proline ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 345 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 28/145 (19%), Positives = 71/145 (48%), Gaps = 14/145 (9%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R+ +++PILD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 178 ARSDRVQRIMIPILDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAIILYAIVPVVRLTDL 236 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 + D+ E + +F ++ QK + +P ++P + M+G ++ S Sbjct: 237 GIRLVDP------DVTEAADAFGMTKRQKLLNVQIPLALPNI-------MAGVNQTIMMS 283 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKE 235 +VV +++ PG+G + I+ Sbjct: 284 LAMVVIASLVSAPGLGVLVLRGIRS 308 >gi|160941492|ref|ZP_02088826.1| hypothetical protein CLOBOL_06382 [Clostridium bolteae ATCC BAA-613] gi|158435576|gb|EDP13343.1| hypothetical protein CLOBOL_06382 [Clostridium bolteae ATCC BAA-613] Length = 354 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 17/170 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ + IP ++ +V +L+ G V L + FA+ T + + N+ Sbjct: 195 PVIKFLGPIPTATWIPIIMVVAASLFRGAVFIIALGSWFAV--------TVASMSGIQNV 246 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +D E +R+ S Q + + +P +MP ++ +MS ++ +EM+ V Sbjct: 247 DKDFFEAARTLGASEGQLVFRVAIPHAMPSILQGCTQAMSSSCVAIMIAEMMGVK----- 301 Query: 222 LPGIGSYIALA---IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 G+G Y+ A + A L+ + + ++ L+ R ++ W N Sbjct: 302 -AGLGWYMNWAKSWAAYDKMFAALFVICFIFTIVTKVLDLIKRRVLRWQN 350 >gi|303256366|ref|ZP_07342380.1| ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331001510|ref|ZP_08325128.1| putative aliphatic sulfonates transport permease protein SsuC [Parasutterella excrementihominis YIT 11859] gi|302859857|gb|EFL82934.1| ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329568239|gb|EGG50056.1| putative aliphatic sulfonates transport permease protein SsuC [Parasutterella excrementihominis YIT 11859] Length = 259 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I NV +G +KE+A + +++I P P TG G +W A + Sbjct: 141 IYLNVFSGFKQIDKSYKELAFMLRLNRMERFKHIEFPASLPNIFTGLRLGFGYSWRALVG 200 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 +E+ + ++GLG I +++E +V +G+L C VL + Sbjct: 201 AELIA------ASSGLGYLIGDASEMSRTDKVFVGIL--CIAVLGV 238 >gi|209919589|ref|YP_002293673.1| putative glycine/betaine/choline ABC transporter permease [Escherichia coli SE11] gi|209912848|dbj|BAG77922.1| putative glycine/betaine/choline ABC transporter permease component [Escherichia coli SE11] gi|324015916|gb|EGB85135.1| ABC transporter, permease protein [Escherichia coli MS 117-3] Length = 385 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFQHVQLPLALP 310 >gi|170697510|ref|ZP_02888600.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] gi|170137533|gb|EDT05771.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] Length = 255 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%) Query: 69 TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121 TL L + +S L + A A A +R G +P+ +DI Q+ P + L V Sbjct: 62 TLAHLGTVALSSLIGMLIAIAAGIAVTRPAGADFLPVARSVVDIGQTFPPVAVLALAVPA 121 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 L P +I L + IF S + L ++PRD+ + +R +SGWQ+ Sbjct: 122 VGFGLKP-VLIALVLYGLLPIFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172 Query: 182 YLGVPFSMPGLVWNMMMSM 200 + +P + P +V + +++ Sbjct: 173 SVELPLAFPVIVNGIRLAV 191 >gi|163853131|ref|YP_001641174.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|163664736|gb|ABY32103.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] Length = 353 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 ++S++ +P+GI G +P I+ +P + + PA F L+V+ + Y P + + ++ Sbjct: 171 LSSLVGVPLGILCGAQPTIARLTEPVIEFVRYLPAPAFGALMVAILGIYD-GPKIAIIVI 229 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 F Q ++ N E A + R R +I+P + P G Sbjct: 230 GTFFQQVLVIANTTRRVDPL---LIEAALTMGSRNLRLIRRVIVPAVLPQIYRDQRILLG 286 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 AW IV+E+ ++G+ +I + F V +L++ +A + Sbjct: 287 WAWTYLIVAELIG------TSSGITFFITQQARYQHFDNVYAAILVIGLVGIATD 335 >gi|329923189|ref|ZP_08278677.1| protein LplC [Paenibacillus sp. HGF5] gi|328941575|gb|EGG37863.1| protein LplC [Paenibacillus sp. HGF5] Length = 294 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 24/45 (53%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 N+PR+LE+ SR + W + VP S+P L + +M G W Sbjct: 166 NLPRELEDASRIDGAGHFSTLWKIYVPLSLPALATTGLFTMVGHW 210 >gi|116696181|ref|YP_841757.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530680|emb|CAJ97027.1| ABC-type transporter, permease component: TauT family [Ralstonia eutropha H16] Length = 281 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 18/220 (8%) Query: 50 DIVPITLDVHSLPQ---YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 D+VP + P+ + S + R+ + + + V +SR L +L+P L++ Sbjct: 65 DVVPAAWQLLQSPKLVLHLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLPPLEV 124 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 ++ IP + ++ ++ F + +EL+ IF F ++ + + + L Sbjct: 125 LRPIPGVAWIPLAILMFPS--------SELSMIFITFIGALFPILLNTIHGVERTDPRLV 176 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 +RS W F + +P ++P +V + + M WF +V +EMI G GIG Sbjct: 177 ATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMI-AGQY-----GIG 230 Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 Y A Q+ I+ ML ++G + L + + W Sbjct: 231 YYTWEAYNLQNYADIVVGML-LIGAFGMGSSALIKRLGAW 269 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%) Query: 448 PNLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P+ LS++ I G + IL N I G A S W + ++LP P Sbjct: 142 PSSELSMIFITFIGALFPILLNTIHGVERTDPRLVATARSLGARRWTVFPEVLLPAALPS 201 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 VTG G +W + +E+ + + G+G Y E+ ++ ++V+G+L++ F Sbjct: 202 IVTGLAIGMGTSWFCLVTAEMIAGQY------GIGYYTWEAYNLQNYADIVVGMLLIGAF 255 >gi|299534624|ref|ZP_07047956.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus fusiformis ZC1] gi|298729997|gb|EFI70540.1| aliphatic sulfonate ABC transporter permease [Lysinibacillus fusiformis ZC1] Length = 264 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 14/184 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442 +T+ V+ + +++ + + + + P +S + P+ +L A P P+++ + Sbjct: 73 SVTLMETVIGFLAGTLLGTLIAVVLWWSPLLSKVLDPYLVILNAMPKVALGPILIVALGP 132 Query: 443 -YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 Y+ + L ++I Y F + PN + +V +F T W+ +R +ILP Sbjct: 133 GYFSIIAMGALISIIITTIVVYTAFKGVD-----PN-YSKVLQTFGATRWQIFREVILPA 186 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 FP ++ G +W IV G + + GLG I + +F V++ +LI Sbjct: 187 SFPTIISTLKVNVGLSWVGVIV------GEFLVASKGLGYLIIYGFQVFNFNLVLMSLLI 240 Query: 562 MCCF 565 + F Sbjct: 241 IAFF 244 >gi|260856104|ref|YP_003229995.1| putative transporter subunit [Escherichia coli O26:H11 str. 11368] gi|260868833|ref|YP_003235235.1| putative transporter subunit [Escherichia coli O111:H- str. 11128] gi|257754753|dbj|BAI26255.1| predicted transporter subunit [Escherichia coli O26:H11 str. 11368] gi|257765189|dbj|BAI36684.1| predicted transporter subunit [Escherichia coli O111:H- str. 11128] gi|323152357|gb|EFZ38646.1| inner membrane ABC transporter permease protein yehY [Escherichia coli EPECa14] gi|323176975|gb|EFZ62565.1| inner membrane ABC transporter permease protein yehY [Escherichia coli 1180] Length = 385 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|206564221|ref|YP_002234984.1| putative ABC transporter system permease [Burkholderia cenocepacia J2315] gi|198040261|emb|CAR56246.1| putative ABC transporter system permease [Burkholderia cenocepacia J2315] Length = 255 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%) Query: 69 TLRMLSAMVISLLFTFVYATLA--AKSRRLGMVLVPI----LDIMQSIPILGFLTFTV-V 121 TL L + +S L + A A A +R G +P+ +DI Q+ P + L V Sbjct: 62 TLAHLGTVALSSLIGTIVAVSAGIAVTRPFGADFLPVARSVVDIGQTFPPVAVLALAVPA 121 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 L P +I L + +F S + L ++PRD+ + +R +SGWQ+ Sbjct: 122 VGFGLKP-VLIALVLYGLLPVFESTIAG--------LEDVPRDVVDAARGMGMSGWQQLV 172 Query: 182 YLGVPFSMPGLVWNMMMSM 200 + +P + P +V + +++ Sbjct: 173 SVELPLAFPVIVNGIRLAV 191 >gi|124268598|ref|YP_001022602.1| ATP-binding protein of ABC transporter [Methylibium petroleiphilum PM1] gi|124261373|gb|ABM96367.1| ATP-binding protein of ABC transporter [Methylibium petroleiphilum PM1] Length = 280 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N G + +++ + + T W+ R++++P PY++ G A G + ++V Sbjct: 150 ILANTTIGLKSADARLRDLFTLYGATRWQRLRFLLVPSALPYFMAGLKVAGGLSLIGAVV 209 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 +E + R TGL + I E++ + P + +L++ +A+ Sbjct: 210 AEFTA--GTAGRDTGLASRILEASFRTETPLMFAALLLVSLLGVAI 253 >gi|148270801|ref|YP_001245261.1| binding-protein-dependent transport systems inner membrane component [Thermotoga petrophila RKU-1] gi|147736345|gb|ABQ47685.1| binding-protein-dependent transport systems inner membrane component [Thermotoga petrophila RKU-1] Length = 283 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 136 LAAIFAIFTSQVWNMTFSMYQ---SLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 L A+F++ S +W + F M L NIP++L E +R + WQ FWY+ P Sbjct: 149 LNALFSVVLSGIWGVGFFMMMFITGLQNIPQELIEAARIDGANRWQTFWYVTFP 202 >gi|157156192|ref|YP_001463476.1| quaternary amine ABC transporter permease [Escherichia coli E24377A] gi|300818870|ref|ZP_07099075.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|157078222|gb|ABV17930.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli E24377A] gi|300528489|gb|EFK49551.1| ABC transporter, permease protein [Escherichia coli MS 107-1] Length = 385 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|319783021|ref|YP_004142497.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168909|gb|ADV12447.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 283 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 18/175 (10%) Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPND 478 PFA +L P FPL+ ++N LL + ++ IL N G ++ + Sbjct: 116 PFAIVLQVTPIVAIFPLI-----NIYVNDQTTKLLLCAWIVAFFPILSNTTLGLNSVDRN 170 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 +++ T W+ RY+ LP PY++ G A G + ++V+E + +++G Sbjct: 171 LRDMFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVA--GTTGQSSG 228 Query: 539 LGAYIAESTEKGSFPEV--------VLGVLIMCCFVLALNRFL--WHPLYLYGTR 583 L + I E+ + + P + + G+LI L + L WH L R Sbjct: 229 LASRIIEAGYRLNAPRLFAALFLISLTGILIFLVLSLISHLILRRWHESALKQER 283 >gi|299529137|ref|ZP_07042585.1| glycine betaine/L-proline transportsystem permease protein proW [Comamonas testosteroni S44] gi|298722893|gb|EFI63802.1| glycine betaine/L-proline transportsystem permease protein proW [Comamonas testosteroni S44] Length = 414 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 28/171 (16%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT-SQV 147 L A S R P+LD MQ+ P +L V+ F G V G + +FA+ ++ Sbjct: 212 LLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLFGI---GNVPGVIVTIVFALPPLIRL 268 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203 N+ + DL E SR++ S Q W + +P +MP G+ +M+S+S Sbjct: 269 TNLGIRQVRP------DLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLS-- 320 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 VV + MI VG G+G + I D+ A + LG++ L Sbjct: 321 --MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLATVGGLGIVLL 359 >gi|218699260|ref|YP_002406889.1| putative ABC transporter permease [Escherichia coli IAI39] gi|218369246|emb|CAR17003.1| putative transporter subunit: permease component of ABC superfamily [Escherichia coli IAI39] Length = 385 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|169632054|ref|YP_001705790.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter baumannii SDF] gi|169150846|emb|CAO99449.1| alkanesulfonate transport protein (ABC superfamily, membrane) [Acinetobacter baumannii] Length = 254 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 23/176 (13%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 SR +L L ++++IP L + +++F E A +F + + + Sbjct: 96 SSRFASTLLDTTLQMIRNIPALALIPLVILWFGI--------DETAKLFLVAVGVFFPID 147 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + Y + ++ L E+ +S+ LS WQ + + +P +MP ++ + ++ W Sbjct: 148 INTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWV------ 201 Query: 212 MIVVGDTVIPLPGIGSYIALAIKE---QDLLAI---LYAMLTMLGVIFLYDQLLFR 261 +++V +T+ GIG Y+ + +E D++ + LYA+L L + QLL R Sbjct: 202 LLIVAETISAQAGIG-YMTMNAREFLQTDVVLVGILLYALLGKLADVL--AQLLER 254 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + I N G + E+ Sbjct: 109 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIDINTYHGIRSVDPQLIEM 164 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 S+ ++ W+ ++ IILPG P + G A G W IV+E S Sbjct: 165 GKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETIS 210 >gi|251799432|ref|YP_003014163.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247547058|gb|ACT04077.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length = 265 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 28/209 (13%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ RV++ + + + GI +G + P Q++ P+ PL + Sbjct: 71 ISVTRVLLGFALGGSLALLFGIAVGLFRRTEKLLDPTIQMIRMIPSLAVVPLFI------ 124 Query: 445 HLNPNLWLSL------LMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 LW + L+I + ++ L+ N G N EVA + + + Sbjct: 125 -----LWFGIGEESKVLLIAKSAFFPLYINTFLGIRNVDNKLFEVARVLGFSRLKQITRL 179 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILP P + GA + G +W +V+E+ + T+G+G ++++ + P V + Sbjct: 180 ILPAALPNIILGARLSIGLSWLGLVVAELIA------STSGIGYMMSDARQFADTPVVFV 233 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 G+ I L F L L R LR Sbjct: 234 GIFIFAV----LGLFTDTLLALIERRLLR 258 >gi|116334430|ref|YP_795957.1| ABC-type phosphate transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099777|gb|ABJ64926.1| ABC-type phosphate transport system, permease component [Lactobacillus brevis ATCC 367] Length = 317 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 67/134 (50%), Gaps = 8/134 (5%) Query: 92 KSRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQV 147 + R+L L P+++++ IP + GF+ VV + +L G G ++A F +F + Sbjct: 126 RGRKL---LQPVIELLVGIPSVVYGFIGLAVVVPFMRHLVGGSGFGI-ISATFVLFVMVL 181 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 +T SL ++PR +E S + + WQ + + + PG++ ++ M+ + Sbjct: 182 PTITSMTVDSLRSVPRYYKEASLALGATRWQTVSRVILRSATPGILTAVIFGMARAFGEA 241 Query: 208 VASEMIVVGDTVIP 221 +A +M++ ++P Sbjct: 242 LAVQMVIGNAAIMP 255 >gi|110806109|ref|YP_689629.1| putative transport system permease [Shigella flexneri 5 str. 8401] gi|110615657|gb|ABF04324.1| putative transport system permease protein [Shigella flexneri 5 str. 8401] Length = 385 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|333002845|gb|EGK22401.1| inner membrane ABC transporter permease protein yehY [Shigella flexneri K-272] gi|333016849|gb|EGK36173.1| inner membrane ABC transporter permease protein yehY [Shigella flexneri K-227] Length = 385 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|261208668|ref|ZP_05923105.1| phosphate ABC transporter [Enterococcus faecium TC 6] gi|289566074|ref|ZP_06446510.1| phosphate ABC transporter, permease PstC [Enterococcus faecium D344SRF] gi|260077170|gb|EEW64890.1| phosphate ABC transporter [Enterococcus faecium TC 6] gi|289162096|gb|EFD09960.1| phosphate ABC transporter, permease PstC [Enterococcus faecium D344SRF] Length = 306 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P+++++ IP + GF+ +V+ + +++ G G LA F +F + +T Sbjct: 122 ILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMT 180 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 181 VDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVI 240 Query: 215 VGDTVIP 221 ++P Sbjct: 241 GNAALMP 247 >gi|110668537|ref|YP_658348.1| sulfonate ABC transporter permease [Haloquadratum walsbyi DSM 16790] gi|109626284|emb|CAJ52742.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Sulfonate ABC transporter permease protein [Haloquadratum walsbyi DSM 16790] Length = 301 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 28/226 (12%) Query: 51 IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110 I IT+ + L +++ L L +V+ S RL L P+ ++ I Sbjct: 95 IAGITVPMTRLTANLAQSLLHYLPGLVVGSTLGVSLGLAMGWSGRLDNALTPVTRFLRPI 154 Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170 P L ++ F +V+ + G A F + W ++ Y + + L+EV+ Sbjct: 155 PPLAWIVFAIVWIGIGHGG--------AAFIVGIGAFWINFYNAYAGVEGVSTHLKEVAA 206 Query: 171 SFRLSG-WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 S + + +P +MP + + S+ W VVA+E+ PG+G I Sbjct: 207 SLGVDDDLTMIRKVIIPAAMPSITTGLRTSIGQCWMIVVAAELFGA-------PGVGFQI 259 Query: 230 ALAIKEQDLLA-ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 A Q+L + A + ++ ++FL +FR R+ER Sbjct: 260 INA--AQNLATDVSVAYMVVISLVFLVSDGVFR---------RVER 294 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 5/133 (3%) Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 +++ S + + +G+ +G+ + + + P + L P + + + H + Sbjct: 120 LVVGSTLGVSLGLAMGWSGRLDNALTPVTRFLRPIPPLAWIVFAIVWIGIGHGG----AA 175 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVTGAIT 512 ++ G W +N AG KEVA+S + R +I+P P TG T Sbjct: 176 FIVGIGAFWINFYNAYAGVEGVSTHLKEVAASLGVDDDLTMIRKVIIPAAMPSITTGLRT 235 Query: 513 ACGGAWNASIVSE 525 + G W + +E Sbjct: 236 SIGQCWMIVVAAE 248 >gi|308176055|ref|YP_003915461.1| aliphatic sulfonates ABC transporter inner membrane subunit SsuC [Arthrobacter arilaitensis Re117] gi|307743518|emb|CBT74490.1| putative aliphatic sulfonates ABC transporter, inner membrane subunit SsuC [Arthrobacter arilaitensis Re117] Length = 275 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 8/146 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L L + L S+ L + ++++P L ++ V++ Sbjct: 86 STQRVLLGFFFGSLLGLAFGALVGLSKLADAFLGLSISALRAVPSLAWVPLLVLWMKYGE 145 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 KV + A F +FT+ + +L ++ L E +RSF L G + + +P Sbjct: 146 DSKVTLVIIGAFFPVFTT--------VALALRHVDAQLVEAARSFGLKGLKLLRTVQLPA 197 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI 213 +P + + ++++ W F+VA+E++ Sbjct: 198 VVPAIFSGLRLALAQAWLFLVAAELL 223 >gi|302349192|ref|YP_003816830.1| Putative sulfur reductase membrane-bound subunit, membrane anchor PsrC-like protein [Acidilobus saccharovorans 345-15] gi|302329604|gb|ADL19799.1| Putative sulfur reductase membrane-bound subunit, membrane anchor PsrC-like protein [Acidilobus saccharovorans 345-15] Length = 246 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 15/98 (15%) Query: 444 YHLNPNLW-LSLLMIFGTQWYILFNVIAGASAFP--------------NDFKEVASSFHI 488 + + P W L+LL++ G ++ +++G SAFP F ++A++ + Sbjct: 95 HSVTPVAWSLALLILLGFSSRLVPILVSGLSAFPPLETSLIEGLNASRARFGDLAAALGL 154 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 G R YI LP PY+ +G+ +A G A S V+E Sbjct: 155 RGLRRLAYIDLPASVPYFASGSRSALGVALIVSPVAEA 192 >gi|298292987|ref|YP_003694926.1| choline ABC transporter permease [Starkeya novella DSM 506] gi|296929498|gb|ADH90307.1| choline ABC transporter, permease protein [Starkeya novella DSM 506] Length = 283 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 23/165 (13%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PILD+MQ+IP +L T+V F G V G IFAI +T + + ++ Sbjct: 131 PILDLMQTIPTFVYLIPTLVLFGL---GAVPGLISTVIFAI--PAPIRLT---HLGISSV 182 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGD 217 P L E ++F + Q + + +P+++P G+ +M+S+S +VV Sbjct: 183 PPALYEAGKAFGATKTQLLFKVELPYALPTIMAGVTQCIMLSLS-----------MVVIA 231 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 ++ G+G + A+ ++ A L ++ + + D++ RP Sbjct: 232 ALVGADGLGKPVVRALNSVNIAMGFEAGLAIVVLAIVLDRVCKRP 276 >gi|317154923|ref|YP_004122971.1| binding-protein-dependent transporter inner membrane component [Desulfovibrio aespoeensis Aspo-2] gi|316945174|gb|ADU64225.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio aespoeensis Aspo-2] Length = 279 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 55/247 (22%) Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQ--------------SIGYIVNHF---TYQDVLYVIW 381 R + M I W ++ VAI AW+ + I++H T L + Sbjct: 2 RRADMRRINWHGIMFCVAIAAAWELLSTLQIVSPRLFPPLSLILSHLIDLTVSGTLPQVL 61 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF-PANVFFPLVVSC 440 T+ R++ +I AS++ +P+GIW G + I P + L + PA V P + Sbjct: 62 --AQTLLRMLAGLIAASVVMVPLGIWAGRSQRLWLLISPTVESLRSLPPALVILPAM--- 116 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYI-----------LFNVIAGASAFPNDFKEVASSFHIT 489 LL+ G I L N + G A P F + A + T Sbjct: 117 -------------LLLGIGNSMKIFAVFFAAAFPLLLNTMDGVRAIPLMFIDTARTLR-T 162 Query: 490 GWRWWRY-IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 G R + +++P P +G +A A+ +I++E+ T G+G ++ +S Sbjct: 163 GNRTMLFEVVVPAAAPGIFSGLKSAVPIAFIVAILAEMIGG------TDGIGHFLMKSQR 216 Query: 549 KGSFPEV 555 P++ Sbjct: 217 SFDIPQM 223 >gi|260598007|ref|YP_003210578.1| putative osmoprotectant uptake system permease yehW [Cronobacter turicensis z3032] gi|260217184|emb|CBA31037.1| Putative osmoprotectant uptake system permease protein yehW [Cronobacter turicensis z3032] Length = 210 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 15/109 (13%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150 +RR + I ++ ++P L L +V V+G + AI A+F + + + Sbjct: 46 AARRFAEYAMQIFNVGNTLPPLAVLALAMV---------VVGIGDKPAIVALFLASLLPI 96 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + Y LC++P L E + ++ Q+ W + +P + W +M+S Sbjct: 97 VRNTYAGLCSVPGSLIEAANGIGMTKGQRLWQVELPNA-----WPVMLS 140 >gi|83951335|ref|ZP_00960067.1| amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83836341|gb|EAP75638.1| amino acid ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 346 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 31/154 (20%), Positives = 76/154 (49%), Gaps = 22/154 (14%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L +KS R +P+LD++Q++P +L +++ ++ K+ G + + ++ Sbjct: 178 LMSKSDRFQKWTIPVLDMLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVIRLT 236 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGW 204 ++ + + RD+ E + +F ++ QK + + +P ++P G+ +MMS++ Sbjct: 237 DLGIRL------VDRDVIEAADAFGMTRRQKLFGVEIPLALPNIMAGINQTIMMSLA--- 287 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 288 -------MVVIA-SLVSAPGLGVLVLRGIRNLEL 313 >gi|331653557|ref|ZP_08354558.1| inner membrane ABC transporter permease protein YehY [Escherichia coli M718] gi|331048406|gb|EGI20482.1| inner membrane ABC transporter permease protein YehY [Escherichia coli M718] Length = 385 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|294501451|ref|YP_003565151.1| aliphatic sulfonates ABC transporter permease SsuC [Bacillus megaterium QM B1551] gi|294351388|gb|ADE71717.1| aliphatic sulfonates ABC transporter, permease protein SsuC [Bacillus megaterium QM B1551] Length = 284 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 10/180 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ R + + + + + G+ +GF + P Q+L P PL + + Sbjct: 88 ISILRAAIGFAVGAGLGLLFGVIVGFSKKTEHYMDPSIQMLRTVPHLALAPLFILWFGFG 147 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ LL+ G + I N G + +VA + W+ +ILP P Sbjct: 148 EISK----ILLIANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALP 203 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G AW +V+E+ + G+G I ++ + V +G++I Sbjct: 204 NILLGVRLSLGIAWLGLVVAELMG------ASEGVGYMIMDARQFSQTDVVFVGIIIFAV 257 >gi|283785195|ref|YP_003365060.1| ABC transporter membrane protein [Citrobacter rodentium ICC168] gi|282948649|emb|CBG88240.1| putative ABC transporter membrane protein [Citrobacter rodentium ICC168] Length = 236 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 17/129 (13%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMV--LVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 S+M ++LL L ++ G+ ++ I ++ ++P L L +V + Sbjct: 52 SSMFLALLVGIPSGILLSRPAAKGIAEYVMQIFNVGNTLPPLAVLALAMV---------I 102 Query: 132 IG-AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 IG + AI A+F + + + + Y LC +P L E ++ ++ WQ+ + +P + Sbjct: 103 IGIGDFPAIVALFLASLLPIVRNTYAGLCAVPASLTEAAKGIGMTRWQRLCQVELPNA-- 160 Query: 191 GLVWNMMMS 199 W +M+S Sbjct: 161 ---WPVMLS 166 >gi|257879886|ref|ZP_05659539.1| phosphate ABC transporter [Enterococcus faecium 1,230,933] gi|257882730|ref|ZP_05662383.1| phosphate ABC transporter [Enterococcus faecium 1,231,502] gi|257884044|ref|ZP_05663697.1| phosphate ABC transporter [Enterococcus faecium 1,231,501] gi|257886816|ref|ZP_05666469.1| phosphate ABC transporter [Enterococcus faecium 1,141,733] gi|257890402|ref|ZP_05670055.1| phosphate ABC transporter [Enterococcus faecium 1,231,410] gi|257893009|ref|ZP_05672662.1| phosphate ABC transporter [Enterococcus faecium 1,231,408] gi|257895385|ref|ZP_05675038.1| phosphate ABC transporter [Enterococcus faecium Com12] gi|257897996|ref|ZP_05677649.1| phosphate ABC transporter [Enterococcus faecium Com15] gi|258616651|ref|ZP_05714421.1| phosphate ABC transporter, permease protein [Enterococcus faecium DO] gi|260559604|ref|ZP_05831784.1| phosphate ABC transporter [Enterococcus faecium C68] gi|293378254|ref|ZP_06624423.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium PC4.1] gi|293556393|ref|ZP_06674974.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1039] gi|293560381|ref|ZP_06676874.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1162] gi|293568699|ref|ZP_06680014.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1071] gi|293572402|ref|ZP_06683382.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E980] gi|294616274|ref|ZP_06696067.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1636] gi|294617606|ref|ZP_06697236.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1679] gi|294622346|ref|ZP_06701379.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium U0317] gi|257814114|gb|EEV42872.1| phosphate ABC transporter [Enterococcus faecium 1,230,933] gi|257818388|gb|EEV45716.1| phosphate ABC transporter [Enterococcus faecium 1,231,502] gi|257819882|gb|EEV47030.1| phosphate ABC transporter [Enterococcus faecium 1,231,501] gi|257822870|gb|EEV49802.1| phosphate ABC transporter [Enterococcus faecium 1,141,733] gi|257826762|gb|EEV53388.1| phosphate ABC transporter [Enterococcus faecium 1,231,410] gi|257829388|gb|EEV55995.1| phosphate ABC transporter [Enterococcus faecium 1,231,408] gi|257831950|gb|EEV58371.1| phosphate ABC transporter [Enterococcus faecium Com12] gi|257835908|gb|EEV60982.1| phosphate ABC transporter [Enterococcus faecium Com15] gi|260074272|gb|EEW62594.1| phosphate ABC transporter [Enterococcus faecium C68] gi|291588659|gb|EFF20492.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1071] gi|291590788|gb|EFF22504.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1636] gi|291596212|gb|EFF27475.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1679] gi|291598173|gb|EFF29272.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium U0317] gi|291601460|gb|EFF31731.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1039] gi|291605669|gb|EFF35110.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E1162] gi|291607464|gb|EFF36806.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium E980] gi|292643118|gb|EFF61259.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium PC4.1] Length = 306 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P+++++ IP + GF+ +V+ + +++ G G LA F +F + +T Sbjct: 122 ILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMT 180 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 181 VDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVI 240 Query: 215 VGDTVIP 221 ++P Sbjct: 241 GNAALMP 247 >gi|257464644|ref|ZP_05629015.1| Fe3+ ABC transporter, permease [Actinobacillus minor 202] gi|257450304|gb|EEV24347.1| Fe3+ ABC transporter, permease [Actinobacillus minor 202] Length = 674 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 8/113 (7%) Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 S L I + LEE S + + S + F ++ +P P L+ ++ S + A Sbjct: 564 SAMAGLAQIDKSLEEASLTLKGSAFDTFRFIVLPLLKPALLSALVTSFVRSMTTISAIIF 623 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDL-LAILYA---MLTMLGVIFLYDQLLFR 261 +V +T + SYI +++ D LA+ Y +L M+ VIF +++L++R Sbjct: 624 LVTPNTQVAT----SYILSRVEDGDYGLAVAYGSTLILVMMAVIFGFNKLIYR 672 >gi|240948692|ref|ZP_04753064.1| Fe3+ ABC transporter, permease [Actinobacillus minor NM305] gi|240296908|gb|EER47486.1| Fe3+ ABC transporter, permease [Actinobacillus minor NM305] Length = 649 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 8/113 (7%) Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 S L I + LEE S + + S + F ++ +P P L+ ++ S + A Sbjct: 539 SAMAGLAQIDKSLEEASLTLKGSAFDTFRFIVLPLLKPALLSALVTSFVRSMTTISAIIF 598 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDL-LAILYA---MLTMLGVIFLYDQLLFR 261 +V +T + SYI +++ D LA+ Y +L M+ VIF +++L++R Sbjct: 599 LVTPNTQVAT----SYILSRVEDGDYGLAVAYGSTLILVMMAVIFGFNKLIYR 647 >gi|257064067|ref|YP_003143739.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Slackia heliotrinireducens DSM 20476] gi|256791720|gb|ACV22390.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Slackia heliotrinireducens DSM 20476] Length = 249 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 10/131 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D L +A+ T L + + +L F+ A + L + L P++ I Q++P + Sbjct: 45 DWQLLAHHAATTLLEAAVGLALGVLLGFIVAVAMDRFETLYLALEPVVTISQTVPTIAIA 104 Query: 117 TFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 V++ L P V+ I + + +T S+ ++ D+ ++ R+ S Sbjct: 105 PLLVLWLGYGLLPKIVL---------IIVTTFFPITVSLVSGFKSVDPDVVDLMRTMNAS 155 Query: 176 GWQKFWYLGVP 186 WQ F Y +P Sbjct: 156 RWQIFLYAKIP 166 >gi|157377368|ref|YP_001475968.1| putative permease [Shewanella sediminis HAW-EB3] gi|157319742|gb|ABV38840.1| putative permease [Shewanella sediminis HAW-EB3] Length = 299 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 21/196 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYAT----LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 T+R LS + + L V L A+S R ++ PILD+MQ++P +L V Sbjct: 101 EDTMRTLSIITVCTLLAIVLGVPIGILMARSNRTQSLVTPILDVMQTMPAFVYLIPVV-- 158 Query: 123 FMNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 M L GKV G I+AI ++ N+ + + +++ E + ++ + Q+ Sbjct: 159 -MLLGIGKVPGVIAVVIYAIPPVIRLTNLGIRL------VDKEVLEAATAYGANPMQRLM 211 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P + P ++ + ++ VV + MI V G+G + +I Q Sbjct: 212 GVQLPLASPTIMAGINQTIMMALGMVVIASMIGV-------KGLGQPVLKSITNQYFTLG 264 Query: 242 LYAMLTMLGVIFLYDQ 257 L+ L ++ + ++D+ Sbjct: 265 LFNGLAIVALAIIFDR 280 >gi|110640185|ref|YP_680395.1| phosphate ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110282866|gb|ABG61052.1| phosphate ABC transporter membrane protein 2, PhoT family [Cytophaga hutchinsonii ATCC 33406] Length = 290 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 29/49 (59%) Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 S ++L +P +L E S + + WQ WY +P S+PG+V ++++S Sbjct: 160 STREALKTVPYNLREASLALGATKWQTIWYQILPASIPGIVTGAILAIS 208 >gi|17989144|ref|NP_541777.1| nitrate transport permease protein NRTB [Brucella melitensis bv. 1 str. 16M] gi|265989786|ref|ZP_06102343.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. Rev.1] gi|265993105|ref|ZP_06105662.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 3 str. Ether] gi|17984995|gb|AAL54041.1| nitrate transport permease protein nrtb [Brucella melitensis bv. 1 str. 16M] gi|262763975|gb|EEZ10007.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 3 str. Ether] gi|263000455|gb|EEZ13145.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. Rev.1] Length = 284 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 127 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 174 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 175 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 232 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252 G G+GSYI A DL + A+L+++G+I Sbjct: 233 GAQY----GVGSYILEARSLYDLEKLFAGVAILSVMGLI 267 >gi|28211070|ref|NP_782014.1| taurine transport system permease protein tauC [Clostridium tetani E88] gi|28203509|gb|AAO35951.1| taurine transport system permease protein tauC [Clostridium tetani E88] Length = 258 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 4/140 (2%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+VV A II P+G+ G+ I + ++P + P ++ L+V + + Sbjct: 70 RLVVAFFSAVIIATPLGLASGYNSKIRALLEPIIEFYRPLPPLAYYTLLVLWLGIEN-ES 128 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + L L F I + ++ D+ A + W+ + Y+I P P T Sbjct: 129 KIALLFLACFAP---IYISCVSAVIKIKEDYINSAYTVGANKWQVFIYVIFPACLPDIFT 185 Query: 509 GAITACGGAWNASIVSEVAS 528 G TA G A+ + +E+ + Sbjct: 186 GLRTALGVAYTTLVSAEMVA 205 >gi|54023117|ref|YP_117359.1| putative ABC transporter membrane protein [Nocardia farcinica IFM 10152] gi|54014625|dbj|BAD55995.1| putative ABC transporter membrane protein [Nocardia farcinica IFM 10152] Length = 282 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 16/152 (10%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + I++++P L + + +F EL I I + V M Y + N+ R Sbjct: 124 MQILRAVPFLALVPLFIAWFGI--------DELYKILLIAVATVAPMYAYTYLGVRNVDR 175 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 + E +R F LSG + + +P ++PG++ + + +S ++A+E + + Sbjct: 176 KMVEAARGFGLSGARLVREVVLPSALPGVLMALRVCLSISITGLIAAEQVGTRE------ 229 Query: 224 GIGSYIALAIK--EQDLLAILYAMLTMLGVIF 253 G+G + LA + D + + + +LG++F Sbjct: 230 GVGYLVTLAQEYNRTDYMVLCVVLYALLGLVF 261 >gi|193062469|ref|ZP_03043564.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli E22] gi|194427116|ref|ZP_03059667.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli B171] gi|218695742|ref|YP_002403409.1| putative transporter subunit: permease component of ABC superfamily [Escherichia coli 55989] gi|260844737|ref|YP_003222515.1| putative transporter subunit [Escherichia coli O103:H2 str. 12009] gi|300924495|ref|ZP_07140464.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|301325240|ref|ZP_07218758.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|192932135|gb|EDV84734.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli E22] gi|194414737|gb|EDX31008.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli B171] gi|218352474|emb|CAU98251.1| putative transporter subunit: permease component of ABC superfamily [Escherichia coli 55989] gi|257759884|dbj|BAI31381.1| predicted transporter subunit [Escherichia coli O103:H2 str. 12009] gi|300419304|gb|EFK02615.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300847900|gb|EFK75660.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|320199724|gb|EFW74313.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia coli EC4100B] gi|323184246|gb|EFZ69623.1| inner membrane ABC transporter permease protein yehY [Escherichia coli 1357] gi|324118029|gb|EGC11928.1| inner membrane transport system [Escherichia coli E1167] Length = 385 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|330505546|ref|YP_004382415.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina NK-01] gi|328919832|gb|AEB60663.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina NK-01] Length = 264 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +L+ Sbjct: 191 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADVAAR 244 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 245 GLERVWLRWHPAY 257 >gi|314922208|gb|EFS86039.1| ABC transporter, permease protein [Propionibacterium acnes HL001PA1] gi|314965290|gb|EFT09389.1| ABC transporter, permease protein [Propionibacterium acnes HL082PA2] gi|314982446|gb|EFT26539.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA3] gi|315090563|gb|EFT62539.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA4] gi|315094050|gb|EFT66026.1| ABC transporter, permease protein [Propionibacterium acnes HL060PA1] gi|315104440|gb|EFT76416.1| ABC transporter, permease protein [Propionibacterium acnes HL050PA2] gi|327329387|gb|EGE71147.1| ABC transporter, permease protein [Propionibacterium acnes HL103PA1] Length = 296 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 F M QS ++P +LEE +R + WQ FW + VP PGL M+ ++ W Sbjct: 175 FLMRQSFMSLPVELEEAARLDGCNPWQTFWRVMVPVVKPGLFAVMITTVLWSW 227 >gi|300917031|ref|ZP_07133726.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300415706|gb|EFJ99016.1| ABC transporter, permease protein [Escherichia coli MS 115-1] Length = 385 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|170682890|ref|YP_001742994.1| quaternary amine ABC transporter permease [Escherichia coli SMS-3-5] gi|170520608|gb|ACB18786.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli SMS-3-5] Length = 385 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|160875189|ref|YP_001554505.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS195] gi|160860711|gb|ABX49245.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS195] gi|315267385|gb|ADT94238.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS678] Length = 283 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 24/175 (13%) Query: 69 TLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TL M+ S++V L + A +S R+ VL PILD MQ+ P +L V+ F Sbjct: 95 TLAMVFSSVVFCTLVGVPFGIWAGRSDRVNNVLRPILDAMQTTPAFVYLVPIVMLF---S 151 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G G IFA+ V + + Q + +L E + +F + Q + +P Sbjct: 152 IGNTAGVLATIIFAL-PPLVRLTSLGIRQ----VHPELVEAALAFGATSSQVLLKVQIPL 206 Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++P GL +MMS+S VV + MI G G+G+ + L + D+ Sbjct: 207 ALPTIMAGLNQTIMMSLS----MVVIAAMIGAG-------GLGAPVVLGLNTLDI 250 >gi|82543550|ref|YP_407497.1| transport system permease protein [Shigella boydii Sb227] gi|218554696|ref|YP_002387609.1| putative ABC transporter permease [Escherichia coli IAI1] gi|307311290|ref|ZP_07590934.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|81244961|gb|ABB65669.1| putative transport system permease protein [Shigella boydii Sb227] gi|218361464|emb|CAQ99053.1| putative transporter subunit: permease component of ABC superfamily [Escherichia coli IAI1] gi|306908796|gb|EFN39293.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|315061441|gb|ADT75768.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli W] gi|323377978|gb|ADX50246.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli KO11] gi|332097550|gb|EGJ02530.1| inner membrane ABC transporter permease protein yehY [Shigella boydii 3594-74] Length = 385 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|30063577|ref|NP_837748.1| putative transport system permease protein [Shigella flexneri 2a str. 2457T] gi|56480048|ref|NP_708031.2| putative transport system permease protein [Shigella flexneri 2a str. 301] gi|30041830|gb|AAP17557.1| putative transport system permease protein [Shigella flexneri 2a str. 2457T] gi|56383599|gb|AAN43738.2| putative transport system permease protein [Shigella flexneri 2a str. 301] gi|281601588|gb|ADA74572.1| putative transport system permease protein [Shigella flexneri 2002017] gi|313651233|gb|EFS15631.1| inner membrane ABC transporter permease protein yehY [Shigella flexneri 2a str. 2457T] gi|332755748|gb|EGJ86109.1| inner membrane ABC transporter permease protein yehY [Shigella flexneri K-671] gi|332756384|gb|EGJ86735.1| inner membrane ABC transporter permease protein yehY [Shigella flexneri 2747-71] gi|332765938|gb|EGJ96148.1| binding--dependent transport system inner membrane component family protein [Shigella flexneri 2930-71] gi|333016700|gb|EGK36029.1| inner membrane ABC transporter permease protein yehY [Shigella flexneri K-304] Length = 385 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|194431453|ref|ZP_03063745.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Shigella dysenteriae 1012] gi|194420278|gb|EDX36355.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Shigella dysenteriae 1012] gi|332092646|gb|EGI97717.1| inner membrane ABC transporter permease protein yehY [Shigella dysenteriae 155-74] Length = 385 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|126174513|ref|YP_001050662.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS155] gi|153000552|ref|YP_001366233.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS185] gi|217973482|ref|YP_002358233.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS223] gi|304408624|ref|ZP_07390245.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS183] gi|307305453|ref|ZP_07585201.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica BA175] gi|125997718|gb|ABN61793.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS155] gi|151365170|gb|ABS08170.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS185] gi|217498617|gb|ACK46810.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS223] gi|304352445|gb|EFM16842.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica OS183] gi|306911756|gb|EFN42181.1| binding-protein-dependent transport systems inner membrane component [Shewanella baltica BA175] Length = 283 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 24/175 (13%) Query: 69 TLRML-SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TL M+ S++V L + A +S R+ VL PILD MQ+ P +L V+ F Sbjct: 95 TLAMVFSSVVFCTLVGVPFGIWAGRSDRVNNVLRPILDAMQTTPAFVYLVPIVMLF---S 151 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G G IFA+ V + + Q + +L E + +F + Q + +P Sbjct: 152 IGNTAGVLATIIFAL-PPLVRLTSLGIRQ----VHPELVEAALAFGATSSQVLLKVQIPL 206 Query: 188 SMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++P GL +MMS+S VV + MI G G+G+ + L + D+ Sbjct: 207 ALPTIMAGLNQTIMMSLS----MVVIAAMIGAG-------GLGAPVVLGLNTLDI 250 >gi|320176633|gb|EFW51675.1| Osmoprotectant ABC transporter permease protein YehY [Shigella dysenteriae CDC 74-1112] Length = 385 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|319443191|ref|ZP_07992347.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Corynebacterium variabile DSM 44702] Length = 305 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 20/191 (10%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +TT ++ ++I+ + V+A + A+S+R L P +Q IP+L + +F Sbjct: 111 QTTKIAMTGLLIAAVIGIVWAIVMAQSKRAETALFPYAVFLQCIPVLALVPLIGFWFGFG 170 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + +V L A+F + ++ ++ + QS+ RDL + + RL+ +K L +P Sbjct: 171 FSARVFVCVLIALFPMVSNTLFGL-----QSVDPGMRDLFALHKPSRLTVLRK---LEMP 222 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP--LPGIGSYIA---LAIKEQDLLAI 241 +MP + + + SGG V A +VGD PGIG + ++ DL A Sbjct: 223 AAMPSIF--VGLRTSGGLAVVGA----IVGDFFFKQGTPGIGVLLDNYRSRLQSPDLFAA 276 Query: 242 LYAMLTMLGVI 252 + + ++LGV+ Sbjct: 277 II-LASLLGVV 286 >gi|260428433|ref|ZP_05782412.1| glycine betaine/proline ABC transporter, permease protein [Citreicella sp. SE45] gi|260422925|gb|EEX16176.1| glycine betaine/proline ABC transporter, permease protein [Citreicella sp. SE45] Length = 344 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 22/152 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S RL VL P+LD++Q++P +L +++ ++ K+ G + + ++ N+ Sbjct: 176 SRSDRLQSVLTPVLDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAVILYAIVPVVRLTNL 234 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + D+ E + +F ++ QK + + +P ++P G+ +MMS++ Sbjct: 235 GIRLVNP------DVIEAADAFGMTKSQKLFGVQIPLALPNIMAGVNQTIMMSLA----- 283 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 284 -----MVVIA-SMVSAPGLGILVLRGIRNLEL 309 >gi|227552022|ref|ZP_03982071.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|314939588|ref|ZP_07846815.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133a04] gi|314941214|ref|ZP_07848110.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133C] gi|314948622|ref|ZP_07851997.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0082] gi|314953353|ref|ZP_07856280.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133A] gi|314993431|ref|ZP_07858796.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133B] gi|314995780|ref|ZP_07860869.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133a01] gi|227178775|gb|EEI59747.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|313590052|gb|EFR68897.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133a01] gi|313592096|gb|EFR70941.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133B] gi|313594629|gb|EFR73474.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133A] gi|313599938|gb|EFR78781.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133C] gi|313641128|gb|EFS05708.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0133a04] gi|313644953|gb|EFS09533.1| phosphate ABC transporter, permease protein PstC [Enterococcus faecium TX0082] Length = 316 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 5/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P+++++ IP + GF+ +V+ + +++ G G LA F +F + +T Sbjct: 132 ILQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGI-LAGTFVLFVMILPTVTTMT 190 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L +PR E S + + WQ + + + ++PG++ ++ M+ + +A +M++ Sbjct: 191 VDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVI 250 Query: 215 VGDTVIP 221 ++P Sbjct: 251 GNAALMP 257 >gi|239627741|ref|ZP_04670772.1| transport protein [Clostridiales bacterium 1_7_47_FAA] gi|239517887|gb|EEQ57753.1| transport protein [Clostridiales bacterium 1_7_47FAA] Length = 262 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 8/143 (5%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L ++ + V SR ++ P+ ++++ IP + ++ +++F Sbjct: 73 RVLVGYTVAAVSGIVVGLSMGTSRYAEAIIKPLFELIRPIPPIAWIPLVILWFGV----- 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 EL IF N+T + Y + L +R S F + +P S+P Sbjct: 128 ---GELPKYAIIFIGSFTNITLNAYTGAQRVDPTLIGCARMLGTSDRDIFLRVILPSSLP 184 Query: 191 GLVWNMMMSMSGGWFFVVASEMI 213 + M +++S W V+A+EM+ Sbjct: 185 QIFAGMQVALSTAWMAVLAAEMV 207 >gi|46580882|ref|YP_011690.1| phosphate ABC transporter permease PstC [Desulfovibrio vulgaris str. Hildenborough] gi|46450302|gb|AAS96950.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio vulgaris str. Hildenborough] Length = 295 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 38/233 (16%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFL--------- 116 T L L A+ + ++ A LA R+ + P+++++Q++P ++GF Sbjct: 76 TALSSLIAIPLGIMTAIYLAELAGP--RMRAYVKPLVEMLQALPSVVIGFFGMVIVAPWL 133 Query: 117 --TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 TF + +N+ ++ A +A V +T ++ ++P D+ E S + Sbjct: 134 QETFDIATGLNIANASIMLAFMA---------VPTITSIAEDAIYSVPNDMREASLALGA 184 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG-------- 224 + WQ + VP ++PG+ +++ M S G VV ++V G + LPG Sbjct: 185 THWQTIGRVVVPAALPGISTAVILGMARSIGETMVV---LMVAGGAAM-LPGSIFDPSRP 240 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 + + IA + E + Y L G++ + L F + W + + + T Sbjct: 241 MPASIAAEMAEAPFRSDHYHALFATGLVLFFFTLAFNALAAWIAEKKKQVGTA 293 >gi|193070489|ref|ZP_03051429.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli E110019] gi|192956183|gb|EDV86646.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli E110019] gi|323171781|gb|EFZ57425.1| inner membrane ABC transporter permease protein yehY [Escherichia coli LT-68] Length = 385 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|331683807|ref|ZP_08384403.1| putative transport system permease protein [Escherichia coli H299] gi|331078759|gb|EGI49961.1| putative transport system permease protein [Escherichia coli H299] Length = 385 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|301644147|ref|ZP_07244155.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|301077445|gb|EFK92251.1| ABC transporter, permease protein [Escherichia coli MS 146-1] Length = 385 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|293415414|ref|ZP_06658057.1| osmoprotectant transport system permease [Escherichia coli B185] gi|307138788|ref|ZP_07498144.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli H736] gi|331642753|ref|ZP_08343888.1| putative transport system permease protein [Escherichia coli H736] gi|291433062|gb|EFF06041.1| osmoprotectant transport system permease [Escherichia coli B185] gi|315615368|gb|EFU96000.1| inner membrane ABC transporter permease protein yehY [Escherichia coli 3431] gi|331039551|gb|EGI11771.1| putative transport system permease protein [Escherichia coli H736] Length = 385 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|264677530|ref|YP_003277436.1| glycine betaine/L-proline transportsystem permease protein proW [Comamonas testosteroni CNB-2] gi|262208042|gb|ACY32140.1| glycine betaine/L-proline transportsystem permease protein proW [Comamonas testosteroni CNB-2] Length = 414 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 28/171 (16%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT-SQV 147 L A S R P+LD MQ+ P +L V+ F G V G + +FA+ ++ Sbjct: 212 LLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLFGI---GNVPGVIVTIVFALPPLIRL 268 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGG 203 N+ + DL E SR++ S Q W + +P +MP G+ +M+S+S Sbjct: 269 TNLGIRQVRP------DLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLS-- 320 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 VV + MI VG G+G + I D+ A + LG++ L Sbjct: 321 --MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLATVGGLGIVLL 359 >gi|254392834|ref|ZP_05008004.1| glycine betaine ABC transport system permease protein [Streptomyces clavuligerus ATCC 27064] gi|294811675|ref|ZP_06770318.1| Glycine betaine ABC transport system permease protein [Streptomyces clavuligerus ATCC 27064] gi|326440141|ref|ZP_08214875.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces clavuligerus ATCC 27064] gi|197706491|gb|EDY52303.1| glycine betaine ABC transport system permease protein [Streptomyces clavuligerus ATCC 27064] gi|294324274|gb|EFG05917.1| Glycine betaine ABC transport system permease protein [Streptomyces clavuligerus ATCC 27064] Length = 598 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 5/62 (8%) Query: 73 LSAMVISLLFTFVYATL----AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLY 127 LS +++S L T V A AA+SRR+ V+ P+LD MQ++P + +L +++F + + Sbjct: 91 LSLVLVSTLSTLVIAVPLGVWAARSRRVSAVVRPVLDFMQTMPAMVYLIPGIIFFGVGVV 150 Query: 128 PG 129 PG Sbjct: 151 PG 152 >gi|261407641|ref|YP_003243882.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] gi|261284104|gb|ACX66075.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] Length = 269 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L P +++++P+L + +++F K++ L A F I+ + + + Sbjct: 107 TLDPSFQMLRTVPLLSLIPLFILWFGIGEFSKILMISLGAFFPIYVNT--------FLGI 158 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 ++ L EVSR F+ S Q L VP ++P ++ + +S+ W +V +EM+ Sbjct: 159 RSVDAKLYEVSRIFQYSKLQLLIRLIVPAALPNILLGIRLSLGVSWLVLVVAEMM 213 >gi|120601814|ref|YP_966214.1| phosphate ABC transporter, inner membrane subunit PstC [Desulfovibrio vulgaris DP4] gi|120562043|gb|ABM27787.1| phosphate ABC transporter membrane protein 1, PhoT family [Desulfovibrio vulgaris DP4] gi|311234575|gb|ADP87429.1| phosphate ABC transporter, inner membrane subunit PstC [Desulfovibrio vulgaris RCH1] Length = 297 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 38/233 (16%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFL--------- 116 T L L A+ + ++ A LA R+ + P+++++Q++P ++GF Sbjct: 78 TALSSLIAIPLGIMTAIYLAELAGP--RMRAYVKPLVEMLQALPSVVIGFFGMVIVAPWL 135 Query: 117 --TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 TF + +N+ ++ A +A V +T ++ ++P D+ E S + Sbjct: 136 QETFDIATGLNIANASIMLAFMA---------VPTITSIAEDAIYSVPNDMREASLALGA 186 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG-------- 224 + WQ + VP ++PG+ +++ M S G VV ++V G + LPG Sbjct: 187 THWQTIGRVVVPAALPGISTAVILGMARSIGETMVV---LMVAGGAAM-LPGSIFDPSRP 242 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 + + IA + E + Y L G++ + L F + W + + + T Sbjct: 243 MPASIAAEMAEAPFRSDHYHALFATGLVLFFFTLAFNALAAWIAEKKKQVGTA 295 >gi|52143599|ref|YP_083231.1| sugar ABC transporter, permease [Bacillus cereus E33L] gi|51977068|gb|AAU18618.1| sugar ABC transporter, permease [Bacillus cereus E33L] Length = 277 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 TF + Q +P++LEE +R + +Q +WY+ +P + PGL+ Sbjct: 156 TFLLRQFFMGVPKELEEAARLDGCNHFQIYWYVMLPLAKPGLI 198 >gi|326331224|ref|ZP_08197518.1| glycine betaine/L-proline ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325950994|gb|EGD43040.1| glycine betaine/L-proline ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length = 303 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 4/115 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T V+V ++A +I IP+GIW F P + + ++P L+ P V+ + + ++ Sbjct: 91 TTTSVLVATLVALVIGIPLGIWSAFSPPLRAALRPVLDLMQTLPVFVYL---LPTILFFG 147 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + L ++F + + G + + E A++F W R + LP Sbjct: 148 VGDAPGLVATIVFALPPAVRLTQL-GINQVDAETVEAAAAFGAGRWEILREVQLP 201 >gi|296330400|ref|ZP_06872881.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675995|ref|YP_003867667.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296152668|gb|EFG93536.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414239|gb|ADM39358.1| glycine betaine/carnitine/choline/choline sulfate ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 217 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L A+V+ ++ + ++ ++ +++I+Q++P L L F + L GKV Sbjct: 27 LIAVVLGIIVAVPLGVALTRMKKGAGAIIGVVNIVQTLPSLAILAF---FIPLLGVGKV- 82 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AI A+F V + + Y + + ++L E + ++GW++ + +P ++P Sbjct: 83 ----PAIVALFFYSVLPILRNTYTGIKGVNKNLLESGKGIGMTGWEQIRLVEIPLAIP 136 >gi|305680057|ref|ZP_07402867.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC 14266] gi|305660677|gb|EFM50174.1| ABC transporter, permease protein [Corynebacterium matruchotii ATCC 14266] Length = 354 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 137 AAIFAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 AA A+ + VW M + L IPRD+ E ++ + WQ+FW + +P P L Sbjct: 179 AARLAVIIADVWKTTPFMALLILAGLQMIPRDVYEAAKVDGANAWQQFWKITLPLVKPAL 238 Query: 193 V 193 + Sbjct: 239 M 239 >gi|170019552|ref|YP_001724506.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli ATCC 8739] gi|169754480|gb|ACA77179.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli ATCC 8739] Length = 385 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|83951782|ref|ZP_00960514.1| glycine betaine/proline ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83836788|gb|EAP76085.1| glycine betaine/proline ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 690 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 15/140 (10%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V+ PI D++Q+IP+ FL +++F IG E +A AI + M Q L Sbjct: 532 VVRPICDMLQTIPLFVFLIPVLMFFQ-------IG-EFSAFLAICMYAIVPMIRYTRQGL 583 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + P +L E + S + WQ + P++ P ++ + ++ + A M+V+ Sbjct: 584 VSTPDELIEAAISSGATSWQVMREVRAPYAAPTILLGLNQTI------LYAFAMLVI-AA 636 Query: 219 VIPLPGIGSYIALAIKEQDL 238 ++ G+G I LA+ + D+ Sbjct: 637 LVGTTGLGQSIFLALGQADV 656 >gi|188494903|ref|ZP_03002173.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli 53638] gi|256022185|ref|ZP_05436050.1| binding-protein-dependent transport systems inner membrane component [Escherichia sp. 4_1_40B] gi|312973620|ref|ZP_07787792.1| inner membrane ABC transporter permease protein yehY [Escherichia coli 1827-70] gi|188490102|gb|EDU65205.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli 53638] gi|310332215|gb|EFP99450.1| inner membrane ABC transporter permease protein yehY [Escherichia coli 1827-70] Length = 385 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|323692543|ref|ZP_08106776.1| hypothetical protein HMPREF9475_01639 [Clostridium symbiosum WAL-14673] gi|323503409|gb|EGB19238.1| hypothetical protein HMPREF9475_01639 [Clostridium symbiosum WAL-14673] Length = 251 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 24/220 (10%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 ++ +L +A+ T LS +VISL+ + + + L P+L + Q++P++ Sbjct: 48 ELDTLGGHAAVTVSEALSGIVISLILALLLGIVMDCFPIIKQGLYPVLVVTQTVPMIVLA 107 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++Y K++ L F I S FS L + + + RS+ Sbjct: 108 PILIIYMGFGVAPKILTVVLMCFFPIAVS------FS--DGLAQVDEEYVHLVRSYGAGR 159 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W+ + + +P ++P L+ + +S + + ++ VVG+ + G+G Y+ L +K Sbjct: 160 WKTYRLVKIPAAVPSLLSGLKVSAT----YSISGA--VVGEWIGSQKGLGYYL-LRVKNS 212 Query: 237 DL--------LAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 + L I++ L M G+I LY QL P + N Sbjct: 213 YMLDKVFACVLVIIFLSLCMNGLIRLY-QLAALPYLHTKN 251 >gi|307941787|ref|ZP_07657141.1| glycine betaine/L-proline transport system permease protein ProW [Roseibium sp. TrichSKD4] gi|307774884|gb|EFO34091.1| glycine betaine/L-proline transport system permease protein ProW [Roseibium sp. TrichSKD4] Length = 302 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 25/172 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R+ ++ P+LD+MQ++P +L V+ F GKV G ++AI ++ N Sbjct: 133 ARSDRMQSIVNPVLDLMQTMPSFVYLIPVVMIF---GLGKVPGLIAIVVYAIPPIIRLTN 189 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + S D+ E + +F + QK + +P ++P G+ +MM+++ Sbjct: 190 LGIRLVDS------DVLEAADAFGSNSRQKLINVQLPLALPTIMAGINQTIMMALA---- 239 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 M+VV +I + G+G + AI Q L L ++ + ++D+ Sbjct: 240 ------MVVVA-ALIGVKGLGQPVLNAIANQYFTMGLMNGLAIVAIAIIFDR 284 >gi|261339665|ref|ZP_05967523.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288318491|gb|EFC57429.1| glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 236 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 15/109 (13%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150 +R + ++ I ++ ++P L L +V VIG + AI A+F + + + Sbjct: 71 AARGVAEYVMQIFNVGNTLPPLAVLALAMV---------VIGIGDTPAIIALFLASLLPI 121 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + Y LC++P L E + ++ WQ+ + +P + W +M+S Sbjct: 122 VRNTYAGLCSVPASLLEAANGIGMTKWQRLRQVEIPNA-----WPVMLS 165 >gi|160902001|ref|YP_001567582.1| binding-protein-dependent transport systems inner membrane component [Petrotoga mobilis SJ95] gi|160359645|gb|ABX31259.1| binding-protein-dependent transport systems inner membrane component [Petrotoga mobilis SJ95] Length = 282 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 27/167 (16%) Query: 53 PITLD-----VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA--------KSRRL--G 97 P TLD + ++P R L L + ++F ++A+LAA K R L Sbjct: 60 PATLDAYKYVIENVP--FPRYFLNSLIITALGIIFNVLFASLAAYPLARLEFKGRNLIFF 117 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 ++L+P++ +Q I+ F+T + N Y V+ + ++ IF IF M Q+ Sbjct: 118 LILLPMMIPIQGGLIVNFITILNLKLFNTYLAVVLPSAVS-IFGIFI---------MRQN 167 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 IPRDLE+ +R + +Q + + P P ++S +G W Sbjct: 168 YLAIPRDLEDAARIDGCNEFQLWRKIMFPMVRPAATALSIISFAGFW 214 >gi|39935689|ref|NP_947965.1| sulfonate ABC transporter permease [Rhodopseudomonas palustris CGA009] gi|39649542|emb|CAE28064.1| possible sulfonate transport system permease protein. Subunit of an ABC transporter [Rhodopseudomonas palustris CGA009] Length = 280 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 ++ ++ R + EV R+FRLSG + +P +P V + + + GW FVVA+E Sbjct: 163 AIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVLALRVGLGLGWMFVVAAE 217 >gi|295095968|emb|CBK85058.1| ABC-type proline/glycine betaine transport systems, permease component [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 236 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 15/109 (13%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150 +R + ++ I ++ ++P L L +V VIG + AI A+F + + + Sbjct: 71 AARGIAEYVMQIFNVGNTLPPLAVLALAMV---------VIGIGDKPAIIALFLASLLPI 121 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + Y LC++P L E + ++ WQ+ + +P + W +M+S Sbjct: 122 VRNTYAGLCSVPASLLEAANGIGMTKWQRLRQVEIPNA-----WPVMLS 165 >gi|222529175|ref|YP_002573057.1| binding-protein-dependent transport systems inner membrane component [Caldicellulosiruptor bescii DSM 6725] gi|222456022|gb|ACM60284.1| binding-protein-dependent transport systems inner membrane component [Caldicellulosiruptor bescii DSM 6725] Length = 264 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 41/206 (19%), Positives = 93/206 (45%), Gaps = 17/206 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT RM+ +ISLL + K L L P++ Q++P + +L F ++++ Sbjct: 70 TTKRMVIGYLISLLAGIILGLSIVKFGFLDRNLRPLILGFQTLPSVCWLPFAILWYGL-- 127 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 +E A IF ++++T ++ + N+ + +++ +G + + + +P Sbjct: 128 ------SEKAIIFVTAIGSLFSITLAVESGIKNVNPLYIKAAKTMGATGLRLYLNVIIPA 181 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+P ++ M GW F A ++ G+ + G+G + + D+ ++ M+ Sbjct: 182 SLP----YVISGMKQGWSF--AFRALMAGEMLFATKGLGQVLMVGRDLADMSQVISVMIV 235 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLE 273 + + ++ +F P+ N+ RL Sbjct: 236 TIVFGLVVEKAIFGPL---ENQIRLR 258 >gi|153870080|ref|ZP_01999553.1| Phosphate ABC transporter, permease protein PstC [Beggiatoa sp. PS] gi|152073453|gb|EDN70446.1| Phosphate ABC transporter, permease protein PstC [Beggiatoa sp. PS] Length = 460 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 15/167 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLT-FTVVYFM 124 +++ ML A+ I L+ + A+ S R V P+L+I+ IP + GF TV F+ Sbjct: 239 SSIAMLVAVPIGLMSAIYLSEYASSSFR--AVAKPVLEILAGIPTVVYGFFAALTVAPFI 296 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWN-MTFSMYQSLCN-----IPRDLEEVSRSFRLSGWQ 178 + G+ IG ++A+ A+ T V M SL + +P+ L + S S ++ + Sbjct: 297 RHW-GETIGLDVASESALATGLVMGIMIIPFVSSLSDDVISMVPQSLRDGSYSLGVTQSE 355 Query: 179 KFWYLGVPFSMPGLVWNMMMSMS---GGWFFVVASEMIVVGDTVIPL 222 + +P ++PG++ ++++ S G VV + + TV PL Sbjct: 356 TIRLVVIPAALPGIIGGILLAFSRAIGETMIVVMAAGLSANLTVNPL 402 >gi|148258812|ref|YP_001243397.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146410985|gb|ABQ39491.1| putative sulfonate ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 282 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +RRL + P + +++IP + ++ +++ KV + F ++ Sbjct: 112 ARRL---VDPTIQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY--------L 160 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + ++ ++ R + EV R FRLSG + +P +P V ++ + + GW FVVA+E Sbjct: 161 GLTGAILSVDRKIVEVGRIFRLSGPAMIRRILLPAVLPAYVVSLRVGLGLGWMFVVAAE 219 >gi|52352353|gb|AAU43643.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transporter [uncultured archaeon GZfos23H7] Length = 176 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 34/165 (20%), Positives = 67/165 (40%), Gaps = 12/165 (7%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY-ILF 466 +G + ++ P LL P + PL++ + L P + +IF ++ +L+ Sbjct: 1 MGSKEFVNKSFHPIFSLLYPIPVLGWAPLLMVWIGINELLP-----VALIFLCSFFPVLY 55 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N I G + + A + + + ++LP P TG G AW I +E+ Sbjct: 56 NTITGIKGVDREVIKAARTLGASDMKILTTVVLPLAIPNIFTGLRLEAGMAWRVVIAAEM 115 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + TG+GA + S +++ ++++ LA R Sbjct: 116 VAI------PTGIGALMIRSESLLRMDVIIVCLMVLSVMCLAFER 154 >gi|187732817|ref|YP_001879541.1| ABC transporter quaternary amine uptake (QAT) family, permease [Shigella boydii CDC 3083-94] gi|187429809|gb|ACD09083.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Shigella boydii CDC 3083-94] Length = 385 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|300936556|ref|ZP_07151465.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300458319|gb|EFK21812.1| ABC transporter, permease protein [Escherichia coli MS 21-1] Length = 385 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|284922116|emb|CBG35197.1| ABC transporter, permease protein [Escherichia coli 042] Length = 385 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|157145835|ref|YP_001453154.1| hypothetical protein CKO_01586 [Citrobacter koseri ATCC BAA-895] gi|157083040|gb|ABV12718.1| hypothetical protein CKO_01586 [Citrobacter koseri ATCC BAA-895] Length = 236 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/57 (26%), Positives = 31/57 (54%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++ AIFA+F + + + + Y LC++P L E + ++ WQ+ + +P + P Sbjct: 106 GDVPAIFALFLASLLPVVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWP 162 >gi|226944345|ref|YP_002799418.1| ABC transporter inner-membrane protein [Azotobacter vinelandii DJ] gi|226719272|gb|ACO78443.1| ABC transporter inner-membrane protein [Azotobacter vinelandii DJ] Length = 277 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 34/166 (20%), Positives = 75/166 (45%), Gaps = 16/166 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW-NMT 151 SRR+ L+P+ + +P+LG++ ++ ++G + + + V +T Sbjct: 110 SRRVEAYLLPLFQAISQVPVLGWIPLLMM---------LVGIDETLKYLVIAKAVLVPLT 160 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + NIP EV+R +R + + +P ++P + + +++ GW +V E Sbjct: 161 INTFSGIRNIPPSYLEVARVYRFGLLLRLRRVILPAALPSIFTGVRFALTKGWIALVTVE 220 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++ + GIG + + L ++ AML + V + DQ Sbjct: 221 LLASSE------GIGYLMVDGRQMFQLDLVIVAMLVIGLVGLVLDQ 260 >gi|325272391|ref|ZP_08138786.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] gi|324102468|gb|EGB99919.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] Length = 265 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ + G Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVAKKGG 264 >gi|293410491|ref|ZP_06654067.1| conserved hypothetical protein [Escherichia coli B354] gi|291470959|gb|EFF13443.1| conserved hypothetical protein [Escherichia coli B354] Length = 385 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|23099773|ref|NP_693239.1| ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22778003|dbj|BAC14274.1| ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 266 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL + T L + +I + + ATL SRR V+ P L IM ++P + Sbjct: 68 SLFSHIQVTLLETILGFLIGTIGGILIATLLWSSRRFARVMDPYLVIMNAMPKVALGPIL 127 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +V L PG L+ I F V T +Y + + + ++V SF + WQ Sbjct: 128 IV---ALGPGY-----LSIIAMGFIISVIVTTLVVYSAFNEVDPNYQKVMLSFGATRWQC 179 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 F P ++P ++ + +++ W V+ E +V Sbjct: 180 FKEAIFPSALPAIISTLKVNVGLSWVGVIVGEYLV 214 >gi|320178923|gb|EFW53886.1| Osmoprotectant ABC transporter permease protein YehY [Shigella boydii ATCC 9905] Length = 385 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|256784385|ref|ZP_05522816.1| transport system integral membrane protein [Streptomyces lividans TK24] gi|289768264|ref|ZP_06527642.1| transport system integral membrane protein [Streptomyces lividans TK24] gi|289698463|gb|EFD65892.1| transport system integral membrane protein [Streptomyces lividans TK24] Length = 303 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 8/182 (4%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +I P+G+ + + + I P L + P+ + P V + LN N + ++ Sbjct: 115 ALVIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVP---PAVIWLGLN-NSMMYAVI 170 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G I +++G F + TG R +I+LP P YV G Sbjct: 171 LLGAVPSIANGLVSGVDQVSPIFLRAGRTLGATGLRGTWHIVLPAALPGYVAGLKQGWAF 230 Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 +W + + +E +AS+ + + GLG + V +L++ +A++ ++ Sbjct: 231 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILVVGIAIDLLIFS 287 Query: 576 PL 577 PL Sbjct: 288 PL 289 >gi|218705659|ref|YP_002413178.1| putative ABC transporter permease [Escherichia coli UMN026] gi|293405598|ref|ZP_06649590.1| ABC transporter [Escherichia coli FVEC1412] gi|298381281|ref|ZP_06990880.1| osmoprotectant transport system permease [Escherichia coli FVEC1302] gi|300901252|ref|ZP_07119353.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|218432756|emb|CAR13650.1| putative transporter subunit: permease component of ABC superfamily [Escherichia coli UMN026] gi|291427806|gb|EFF00833.1| ABC transporter [Escherichia coli FVEC1412] gi|298278723|gb|EFI20237.1| osmoprotectant transport system permease [Escherichia coli FVEC1302] gi|300355326|gb|EFJ71196.1| ABC transporter, permease protein [Escherichia coli MS 198-1] Length = 385 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|331699980|ref|YP_004336219.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326954669|gb|AEA28366.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 270 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 14/199 (7%) Query: 368 VNHFTYQDVLYV-IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + Q VL+ IW +++R++V ++IA ++ + G+ IG + + +P Q L Sbjct: 65 IGALAAQGVLFPDIW---TSLWRLLVGLLIAVVLGVVTGLAIGTWQSLETASRPVFQFLR 121 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 + P+ + P +L + W I+ N AG + F A S Sbjct: 122 MVSPLSWAPVAIGLFGIGD-RPVFFL---VAAAAVWPIVLNTAAGVRSIDQGFLLAARSL 177 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 T ++LP I P+ +TG A G W + +E+ T+GLG I S Sbjct: 178 GATPAETLTSVVLPAIRPHVLTGLRLALGIGWVVLVPAEMLG------VTSGLGYEILNS 231 Query: 547 TEKGSFPEVVLGVLIMCCF 565 ++ ++ +V+ +L++ Sbjct: 232 RDQLAYDKVMAVILVIGLL 250 >gi|331663626|ref|ZP_08364536.1| putative transport system permease protein [Escherichia coli TA143] gi|331059425|gb|EGI31402.1| putative transport system permease protein [Escherichia coli TA143] Length = 385 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|256017702|ref|ZP_05431567.1| binding-protein-dependent transport systems inner membrane component [Shigella sp. D9] gi|332278717|ref|ZP_08391130.1| conserved hypothetical protein [Shigella sp. D9] gi|332101069|gb|EGJ04415.1| conserved hypothetical protein [Shigella sp. D9] Length = 385 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|257057391|ref|YP_003135223.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Saccharomonospora viridis DSM 43017] gi|256587263|gb|ACU98396.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Saccharomonospora viridis DSM 43017] Length = 273 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 73/190 (38%), Gaps = 19/190 (10%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 IA++I + +G +G I P + A P P+ + N + Sbjct: 82 IATVIGVALGTALGRSQTALDYIGPLLSFMRAVPPPALVPVFMVLFGI----DNTMKVVT 137 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 ++FG W I+ N I G + +E A SF W ++LP P G + Sbjct: 138 IVFGVIWPIILNTIDGVRSVGPLQQETARSFRTPRHYWITMVVLPAAMPKIFAGLRLSLS 197 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE-----VVLGVL--IMCCFVLA 568 A +++E+ T G+G + + + F V+LGVL + +LA Sbjct: 198 LALILMVIAEMVG------TTNGIGFQLISAQQSFEFATMWTWIVLLGVLGYGLNTLLLA 251 Query: 569 LNR--FLWHP 576 L R +W P Sbjct: 252 LERRVLVWQP 261 >gi|228914447|ref|ZP_04078057.1| Sugar ABC transporter, permease protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845158|gb|EEM90199.1| Sugar ABC transporter, permease protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 264 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 TF + Q +P++LEE +R + +Q +WY+ +P + PGL+ Sbjct: 143 TFLLRQFFMGVPKELEEAARLDGCNHFQIYWYVMLPLAKPGLI 185 >gi|163744407|ref|ZP_02151767.1| binding-protein-dependent transport systems inner membrane component [Oceanibulbus indolifex HEL-45] gi|161381225|gb|EDQ05634.1| binding-protein-dependent transport systems inner membrane component [Oceanibulbus indolifex HEL-45] Length = 268 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 24/158 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y A +A F FT V + Y Sbjct: 111 LVPLVAAIFPIPKIALLPLFVIWFGIDEMSKY------ALIA--FGTFTPTV----VATY 158 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF L W + VP +MPG++ + +S++ +VA+EM+ Sbjct: 159 AAVDNVDRVLIRMGQSFGLGWWSIVSKIVVPGAMPGILSGLRISLTIAIILLVAAEML-- 216 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYA--MLTMLGV 251 G GIG+YI A DL + +L++LGV Sbjct: 217 GAEY----GIGAYILQAGSLYDLERLFAGVVILSLLGV 250 >gi|191165353|ref|ZP_03027195.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli B7A] gi|293446481|ref|ZP_06662903.1| osmoprotectant transport system permease [Escherichia coli B088] gi|300821766|ref|ZP_07101911.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|309793008|ref|ZP_07687436.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|331668829|ref|ZP_08369677.1| putative transport system permease protein [Escherichia coli TA271] gi|331678079|ref|ZP_08378754.1| putative transport system permease protein [Escherichia coli H591] gi|190904516|gb|EDV64223.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli B7A] gi|291323311|gb|EFE62739.1| osmoprotectant transport system permease [Escherichia coli B088] gi|300525608|gb|EFK46677.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|308123294|gb|EFO60556.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|323944947|gb|EGB41012.1| inner membrane transport system [Escherichia coli H120] gi|331064023|gb|EGI35934.1| putative transport system permease protein [Escherichia coli TA271] gi|331074539|gb|EGI45859.1| putative transport system permease protein [Escherichia coli H591] Length = 385 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|327439410|dbj|BAK15775.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Solibacillus silvestris StLB046] Length = 253 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 VL P++ +++ + + + F V++F IG + AI IF + + + S S+ Sbjct: 92 VLDPVVQVLRPVSPIAWSPFIVLWFG-------IG-NMPAIVIIFIAAFFPVLLSTVSSV 143 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + + ++ +F +S ++ + +P S P + + M++ W F+VA EM+ Sbjct: 144 KKVDKTYLRIASNFEMSTFETMRKIILPASFPMIANGLHMALGSAWIFLVAGEMV 198 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 +L + ++ + +AS+F ++ + R IILP FP G A G AW + Sbjct: 135 VLLSTVSSVKKVDKTYLRIASNFEMSTFETMRKIILPASFPMIANGLHMALGSAWIFLVA 194 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 E+ +GLG I ++ S V+ ++++ L L++ Sbjct: 195 GEMVG------AQSGLGFLIVDARNSLSLDLVMACIVVIGVLGLLLDK 236 >gi|163792220|ref|ZP_02186197.1| ABC transporter permease protein [alpha proteobacterium BAL199] gi|159181925|gb|EDP66434.1| ABC transporter permease protein [alpha proteobacterium BAL199] Length = 271 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 +P++ + IP + L +++F P KV L F + + ++ Sbjct: 116 LPVVSALFPIPKIALLPLLILWFGIGEPSKVATIALGTFF--------PTAIATFSAVDG 167 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 +PR L +++SF + + W + +P ++PG++ ++ S VVA+EMI Sbjct: 168 VPRSLIRMAQSFGVPAPRIVWSIVLPGALPGILAGFRITASIALILVVAAEMI 220 >gi|145594188|ref|YP_001158485.1| binding-protein-dependent transport systems inner membrane component [Salinispora tropica CNB-440] gi|145303525|gb|ABP54107.1| binding-protein-dependent transport systems inner membrane component [Salinispora tropica CNB-440] Length = 664 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 15/176 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T L A+ +SLLF LA S R ++ P+LD+MQ++P +L + Sbjct: 149 QESMDTLALTLVAVFVSLLFGIPLGILAGVSDRFHRMITPVLDLMQTMPTFVYLAPLTLV 208 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F+ IG A I + + + + + + ++P E + SF + Q+ Sbjct: 209 FL-------IGPASATIATLIYAMPPAIRITAH-GIRSVPAPPVEATDSFGATRRQRLTK 260 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P S +V + + ++A+ +V +I PG+G + A++ D+ Sbjct: 261 ALLPLSKRTIVLGVNQT-------IMAALAMVTVAALIDAPGLGKTVIKALQTTDV 309 >gi|87301750|ref|ZP_01084590.1| ABC transporter, nitrate-like [Synechococcus sp. WH 5701] gi|87283967|gb|EAQ75921.1| ABC transporter, nitrate-like [Synechococcus sp. WH 5701] Length = 248 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 10/140 (7%) Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GI +G P I ++P L+ PA F PL+ + Y+ L L LL+ GT ++ Sbjct: 78 GIAMGSNPLICRLLEPLLGLIRYMPAPAFIPLL---IIYFGLG-ELPKVLLIFVGTFFFN 133 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 ++ P + E A + G ++ P I P + AWN IV+ Sbjct: 134 TLMIMDAVKFVPPELIETALTLGGRGLPILTRVVAPFIAPQVIDAYRINMASAWNLVIVA 193 Query: 525 EVASWGHIHLRTTGLGAYIA 544 E+ + GLG I+ Sbjct: 194 ELVA------ANEGLGKRIS 207 >gi|331673655|ref|ZP_08374418.1| putative transport system permease protein [Escherichia coli TA280] gi|331068928|gb|EGI40320.1| putative transport system permease protein [Escherichia coli TA280] Length = 385 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|306840616|ref|ZP_07473368.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO2] gi|306289354|gb|EFM60590.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO2] Length = 272 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 24/159 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252 G GIGSYI A DL + A+L+++G+I Sbjct: 221 GAQY----GIGSYILEAGSLYDLEKLFAGVAILSVMGLI 255 >gi|301021104|ref|ZP_07185145.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300398285|gb|EFJ81823.1| ABC transporter, permease protein [Escherichia coli MS 69-1] Length = 385 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|159039787|ref|YP_001539040.1| binding-protein-dependent transport systems inner membrane component [Salinispora arenicola CNS-205] gi|157918622|gb|ABW00050.1| binding-protein-dependent transport systems inner membrane component [Salinispora arenicola CNS-205] Length = 282 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 6/142 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY- 443 IT V +++++ + +GI + H+ P + A P PL+V VS+ Sbjct: 86 ITTVMTVQGFLLSAVAGVLIGIALAASRHLERMFAPLLVAVNAVPKIALGPLLV--VSFG 143 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P L + L+ F + I+ + + G + P D E+A S H + W+ +R + P Sbjct: 144 WGTKPILIMVFLLCF---FPIVLSTVTGLTTTPADLAELARSLHASWWQSFRKVRFPAAL 200 Query: 504 PYYVTGAITACGGAWNASIVSE 525 P G A A +++ E Sbjct: 201 PQVFVGLKVAMPLAAIGAVIGE 222 >gi|15966454|ref|NP_386807.1| histidine transport system permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307300509|ref|ZP_07580289.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti BL225C] gi|307318374|ref|ZP_07597809.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] gi|15075725|emb|CAC47280.1| Histidine ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306896056|gb|EFN26807.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] gi|306904675|gb|EFN35259.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti BL225C] Length = 285 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 +T+ V L +T ML A ++S++ L AKSR + + +P+LD+MQ++P Sbjct: 81 VTVGVLGLWDLTMQTLALMLMATIVSVVIGVPMGILVAKSRVVRNITLPVLDVMQTMPSF 140 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L ++ F GKV AI A V + + + ++ E + +F Sbjct: 141 VYLIPALMLF---GLGKV-----PAILATIIYAVPPLIRLTDLGIRQVDAEVVEAATAFG 192 Query: 174 LSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMI 213 S Q + + +P + P GL +MM++S VV + MI Sbjct: 193 GSPGQILFGVELPLATPTIMAGLNQTIMMALS----MVVVASMI 232 >gi|323702426|ref|ZP_08114090.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum nigrificans DSM 574] gi|323532565|gb|EGB22440.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum nigrificans DSM 574] Length = 255 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 10/178 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ +RV+V + I+ ++ +P+G+ G + + P L+ P VF P+++ Sbjct: 65 VSTYRVLVSLGISLLLAVPMGMVAGREEKLDRYLAPLIYLVYPIPKIVFLPILMILFGLG 124 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ +S ++ F IL A + S T +R+++ P + P Sbjct: 125 DVSKIALISFVLFF----QILVTTRDAARGINKEVITSVLSLGATRRDIYRHVVWPAVIP 180 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 +T A G A +E + GLG Y+ ++ ++ E+ G++ M Sbjct: 181 EVLTSLRIASGTAIAVLFFAETVA------SREGLGYYLLDAWSMYAYKEMFAGIIAM 232 >gi|91780826|ref|YP_556033.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693486|gb|ABE36683.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 298 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 18/125 (14%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 IL N G ++ ++ ++ + + W+ RY+ LP PY++ G + G + ++V Sbjct: 171 ILSNTTLGLNSADHNLADLFQLYKASRWQTLRYLRLPSAAPYFLAGVRISGGLSLIGAVV 230 Query: 524 SE-VASWGHIHLRTTGLGAYIAESTEKGSFPEV--------VLGVLIMCCFV----LALN 570 +E VA G +GL + I ES + P + + GV+I C LAL Sbjct: 231 AEFVAGTGGTK---SGLASRILESGYQLQIPRMFAALFLVSMCGVVIFVCLSVVSHLALR 287 Query: 571 RFLWH 575 R WH Sbjct: 288 R--WH 290 >gi|33592782|ref|NP_880426.1| putative permease of ABC transporter [Bordetella pertussis Tohama I] gi|33572430|emb|CAE41996.1| putative permease of ABC transporter [Bordetella pertussis Tohama I] gi|332382195|gb|AEE67042.1| putative permease of ABC transporter [Bordetella pertussis CS] Length = 257 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547 T W + + LP + P +TGA A G AW A I +E + +G GLG +A S Sbjct: 164 TRWGLIKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 E V+ +L++ +++F+ L Sbjct: 218 EIADMTGVMTNILVIAVLAALIDQFVLENL 247 >gi|21224423|ref|NP_630202.1| transport system integral membrane protein [Streptomyces coelicolor A3(2)] gi|13276821|emb|CAC33939.1| putative transport system integral membrane protein [Streptomyces coelicolor A3(2)] Length = 303 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 8/182 (4%) Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +I P+G+ + + + I P L + P+ + P V + LN N + ++ Sbjct: 115 ALVIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVP---PAVIWLGLN-NSMMYAVI 170 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G I +++G F + TG R +I+LP P YV G Sbjct: 171 LLGAVPSIANGLVSGVDQVSPIFLRAGRTLGATGLRGTWHIVLPAALPGYVAGLKQGWAF 230 Query: 517 AWNASIVSE-VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 +W + + +E +AS+ + + GLG + V +L++ +A++ ++ Sbjct: 231 SWRSLMAAEIIASFPDLGV---GLGQLLENGRNASDMAMVFEAILLILVVGIAIDLLIFS 287 Query: 576 PL 577 PL Sbjct: 288 PL 289 >gi|124265309|ref|YP_001019313.1| membrane protein [Methylibium petroleiphilum PM1] gi|124258084|gb|ABM93078.1| membrane protein [Methylibium petroleiphilum PM1] Length = 281 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ FG + + N G A E+A S+ ++G+ +R +ILPG P + G A Sbjct: 151 LVAFGVFFPVYLNTFHGIRAVDPALIEMARSYGLSGFALYRQVILPGALPNILVGLRFAL 210 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S G+G + E V++G+L+ Sbjct: 211 GLMWVLLIVAETIS------AQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADLAAK 264 Query: 568 ALNR--FLWHPLY 578 AL R WHP Y Sbjct: 265 ALERWWLRWHPGY 277 >gi|329114191|ref|ZP_08242953.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] gi|326696267|gb|EGE47946.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] Length = 260 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 19/158 (12%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L I+ +++ +P L ++ F +++F G A F I S W ++ + ++ Sbjct: 102 LLEGIVRLLRPVPGLAWVPFAILWFGLNTSG--------ATFVIAISVFWINFYAAHSAV 153 Query: 159 CNIPRDLEEVSRSFRLSGW-QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +L E++ +F + + + + +P + PGL+ + + GW VVA+E+ V Sbjct: 154 RGVDPELYELAAAFGHGSFLGRLFKVVLPAASPGLMSGLRTGLGQGWMSVVAAELFGV-- 211 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 PGIG+ + ++ LLA ++ ML + LY Sbjct: 212 -----PGIGARM---MQASSLLATDVVVVYMLTMALLY 241 >gi|227545025|ref|ZP_03975074.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908161|ref|ZP_07125628.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|227184994|gb|EEI65065.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894700|gb|EFK88055.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] Length = 299 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 16/172 (9%) Query: 60 SLPQYASRTTLRMLS-------AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 +LP A+ ++ +LS A+V+++ T + + A K L P ++++ IP Sbjct: 76 ALPMIATSFSVTLLSGVIALPLALVVAIAITEILPSTAYK------FLQPTIELLVGIPS 129 Query: 112 -ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169 + G++ TV+ F+ + G LAA +F + MT S +P+ S Sbjct: 130 VVYGYVGLTVIVPFLRRFFGGTGFGILAATCVLFLMILPTMTSMTIDSFRAVPKQYRNAS 189 Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ + +P + G++ M+ M+ + +A +M++ TV+P Sbjct: 190 AGLGATRWQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMP 241 >gi|221196548|ref|ZP_03569595.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] gi|221203217|ref|ZP_03576236.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221177151|gb|EEE09579.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221183102|gb|EEE15502.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] Length = 363 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+G + P+L ++ +P L T +F Y AA F I + + + Sbjct: 194 SRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS--------AAAFLIALATGFPVAV 245 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ R +V+R+F S + +P ++P + + M +S + +V +EM Sbjct: 246 LTWSGIASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEM 305 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + V G+G Y++ A + +YA L ++ ++F Sbjct: 306 MGVKS------GLGWYLSWAQGWASYVN-MYAALIVMALLF 339 >gi|161520882|ref|YP_001584309.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189352935|ref|YP_001948562.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160344932|gb|ABX18017.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189336957|dbj|BAG46026.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 363 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+G + P+L ++ +P L T +F Y AA F I + + + Sbjct: 194 SRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS--------AAAFLIALATGFPVAV 245 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ R +V+R+F S + +P ++P + + M +S + +V +EM Sbjct: 246 LTWSGVASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEM 305 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + V G+G Y++ A + +YA L ++ ++F Sbjct: 306 MGVKS------GLGWYLSWAQGWASYVN-MYAALIVMALLF 339 >gi|221215174|ref|ZP_03588140.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD1] gi|221164858|gb|EED97338.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD1] Length = 340 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SRR+G + P+L ++ +P L T +F Y AA F I + + + Sbjct: 171 SRRIGYWVHPVLRVLGPVPATALLPLTFYFFPTSYS--------AAAFLIALATGFPVAV 222 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + ++ R +V+R+F S + +P ++P + + M +S + +V +EM Sbjct: 223 LTWSGVASVNRQYYDVARTFGASARFLVLRVAIPAALPHVFVGIFMGLSASFTVLVVAEM 282 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + V G+G Y++ A + +YA L ++ ++F Sbjct: 283 MGVKS------GLGWYLSWAQGWASYVN-MYAALIVMALLF 316 >gi|194467048|ref|ZP_03073035.1| phosphate ABC transporter, inner membrane subunit PstC [Lactobacillus reuteri 100-23] gi|194454084|gb|EDX42981.1| phosphate ABC transporter, inner membrane subunit PstC [Lactobacillus reuteri 100-23] Length = 299 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 16/172 (9%) Query: 60 SLPQYASRTTLRMLS-------AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP- 111 +LP A+ ++ +LS A+V+++ T + + A K L P ++++ IP Sbjct: 76 ALPMIATSFSVTLLSGIIALPLALVVAIAITEILPSTAYK------FLQPTIELLVGIPS 129 Query: 112 -ILGFLTFTVVY-FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169 + G++ TV+ F+ + G LAA +F + MT S +P+ S Sbjct: 130 VVYGYVGLTVIVPFLRRFFGGTGFGILAATCVLFLMILPTMTSMTIDSFRAVPKQYRNAS 189 Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ + +P + G++ M+ M+ + +A +M++ TV+P Sbjct: 190 AGLGATRWQTISRVIIPSAKSGILTAMVFGMARAFGEALAVQMVIGNTTVMP 241 >gi|42780970|ref|NP_978217.1| sugar ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42736891|gb|AAS40825.1| sugar ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 277 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 TF + Q +P++LEE +R + +Q +WY+ +P + PGL+ Sbjct: 156 TFLLRQFFMGVPKELEEAARLDGCNHFQIYWYVMLPLAKPGLI 198 >gi|33602004|ref|NP_889564.1| putative permease of ABC transporter [Bordetella bronchiseptica RB50] gi|33576442|emb|CAE33520.1| putative permease of ABC transporter [Bordetella bronchiseptica RB50] Length = 257 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547 T W + + LP + P +TGA A G AW A I +E + +G GLG +A S Sbjct: 164 TRWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 E V+ +L++ +++F+ L Sbjct: 218 EIADMTGVMTNILVIAVLAALIDQFVLENL 247 >gi|299132234|ref|ZP_07025429.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] gi|298592371|gb|EFI52571.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] Length = 277 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 12/131 (9%) Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHL-NPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 P ++L P + PL + ++ L NP + L+ G + +L N IAG Sbjct: 117 NPLIEVLRPIPPIAYIPL---AILWFGLGNPPAYF--LISIGAFFPVLLNTIAGVRHVDG 171 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + A + ++ ++ + +ILP PY ++GA G A+ IV+E+ + + Sbjct: 172 IYIRAARNLGVSQYQMFVRVILPAATPYILSGARIGMGTAFIVVIVAEMIA------VNS 225 Query: 538 GLGAYIAESTE 548 GLG I E+ E Sbjct: 226 GLGFRILEARE 236 >gi|227819515|ref|YP_002823486.1| spermidine/putrescine ABC transporter permease [Sinorhizobium fredii NGR234] gi|227338514|gb|ACP22733.1| probable spermidine/putrescine ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 304 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ A + A+ M ++ +L I R L E +R S WQ W + +P + PG Sbjct: 173 SDFAVVLAMVHLNTLFMVTPIFNTLMRIDRSLIEAARDCGASSWQVLWNVVLPLAKPG-- 230 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 M+ G FVV M + G + +AL +K Q Sbjct: 231 ------MAIGSIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 267 >gi|156933915|ref|YP_001437831.1| hypothetical protein ESA_01741 [Cronobacter sakazakii ATCC BAA-894] gi|156532169|gb|ABU76995.1| hypothetical protein ESA_01741 [Cronobacter sakazakii ATCC BAA-894] Length = 237 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 15/109 (13%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150 +RR + I ++ ++P L L +V V+G + AI A+F + + + Sbjct: 73 AARRFAEYAMQIFNVGNTLPPLAVLALAMV---------VVGIGDKPAIVALFLASLLPI 123 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + Y LC++P L E + ++ Q+ W + +P + W +M+S Sbjct: 124 VRNTYAGLCSVPGSLIEAANGIGMTKGQRLWQVELPNA-----WPVMLS 167 >gi|167031281|ref|YP_001666512.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166857769|gb|ABY96176.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 265 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ + G Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVAKKEG 264 >gi|104779506|ref|YP_606004.1| sulfonate ABC transporter permease SsuC [Pseudomonas entomophila L48] gi|95108493|emb|CAK13187.1| sulfonate ABC transporter, permease protein SsuC [Pseudomonas entomophila L48] Length = 265 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 17/139 (12%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G A Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFAL 190 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL------GVLIMCCFVLA 568 G W IV+E S +G+G Y+A + + +VV+ VL C + A Sbjct: 191 GFMWLTLIVAETIS------ANSGIG-YLAMNAREFLQTDVVVLAIVLYAVLGKCADLAA 243 Query: 569 --LNR--FLWHPLYLYGTR 583 L R WHP Y + Sbjct: 244 RGLERVWLRWHPAYQVAKK 262 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 36/178 (20%), Positives = 83/178 (46%), Gaps = 19/178 (10%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANS 207 Query: 224 GIGSYIALAIKE---QDLLAILYAMLTMLG-VIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D++ + + +LG L + L R + W +++ + G Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKCADLAARGLERVWLRWHPAYQVAKKEG 264 >gi|90410058|ref|ZP_01218075.1| putative permease [Photobacterium profundum 3TCK] gi|90329411|gb|EAS45668.1| putative permease [Photobacterium profundum 3TCK] Length = 296 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R+ V+ P+LDIMQ++P +L V M L GK+ G I+A+ ++ N Sbjct: 129 ARSNRVQSVVTPMLDIMQTMPAFVYLIPVV---MLLGIGKIPGVIAVVIYAVPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + + ++ E + ++ S Q+ + + +P +MP ++ + ++ VV Sbjct: 186 LGIRL------VDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAMVVI 239 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + MI V G+G + +I Q L L ++ + ++D++ Sbjct: 240 ASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281 >gi|311069100|ref|YP_003974023.1| phosphate ABC transporter permease [Bacillus atrophaeus 1942] gi|310869617|gb|ADP33092.1| phosphate ABC transporter permease [Bacillus atrophaeus 1942] Length = 309 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 29/127 (22%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154 VL P+++++ IP + GF+ TV V F+ + G L A + + + +T Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIAAFKTSGTGHSLLAGTIVLSVMILPTITSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ ++P+ L E S + + WQ + VP + P L+ +++ M+ + +A +M++ Sbjct: 185 ADAMASLPKSLREGSYALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 ++P Sbjct: 245 GNTRILP 251 >gi|257054195|ref|YP_003132027.1| ABC-type proline/glycine betaine transport system, permease component [Saccharomonospora viridis DSM 43017] gi|256584067|gb|ACU95200.1| ABC-type proline/glycine betaine transport system, permease component [Saccharomonospora viridis DSM 43017] Length = 298 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 17/168 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 A +T +L A VIS++ LAA+S ++ PI+D +Q++P +L V++ Sbjct: 98 DSAMQTLALVLLAAVISVILAVPLGVLAARSDTASRIIKPIMDFLQTVPQFVYLIPAVIF 157 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG V A + +++ + + R++ E +F + Sbjct: 158 FGIGVGPGVVATVMFALAPGVRLTEL---------GIRQVDREMVEAGEAFGSPPMKILR 208 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 + +P +MP + M+G ++ S +VV ++ PG+G+ + Sbjct: 209 EIQLPLAMPSI-------MAGVNQIIMLSLSMVVIAGMVGAPGLGAQV 249 >gi|218681296|ref|ZP_03529193.1| probable spermidine/putrescine ABC transporter, permease protein [Rhizobium etli CIAT 894] Length = 255 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%) Query: 103 ILDIMQSIPILGF--LTFTVVYFMNLYPGKV---IGAELAAIFAIFTSQVWNMTFSMYQS 157 I+ ++ IP+LG L + + M + P + + ++ A + A+ M ++ + Sbjct: 88 IIRMISWIPVLGRNGLVNSALIEMGVIPKPIEWLLYSDFAVVLAMVHLYTLFMVTPIFNT 147 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L I R L E +R S WQ W + +P + PG M+ G FVV M Sbjct: 148 LMRIDRSLFEAARDAGASSWQVLWNVVIPLAKPG--------MAIGTIFVVTLVMADFST 199 Query: 218 TVIPLPGIGSYIALAIKEQ 236 + G + +AL +K Q Sbjct: 200 VQVMSGGQSASVALMMKNQ 218 >gi|256810304|ref|YP_003127673.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus fervens AG86] gi|256793504|gb|ACV24173.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus fervens AG86] Length = 171 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 5/157 (3%) Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 FA L+ A P+ LVV + P ++ LL I+ N G S N Sbjct: 18 FANLVQAIPSFAVVALVVPLLGI-GFTPAIFAILLRAL---LPIVKNTYVGLSEVDNSII 73 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV-ASWGHIHLRTTGL 539 + A +T W Y+ P +P G A A + +I++ + S G L GL Sbjct: 74 DAAKGIGLTEWEIIGYVRFPHAYPAMFAGIKFAAVLANSIAILTAIIGSGGLGTLVFEGL 133 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576 ++ E GS P ++L VLI F R P Sbjct: 134 ASFNIEKVLAGSIPAIILAVLIDLSFSFMEKRLYKIP 170 >gi|239825865|ref|YP_002948489.1| binding-protein-dependent transporters inner membrane component [Geobacillus sp. WCH70] gi|239806158|gb|ACS23223.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. WCH70] Length = 211 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 8/117 (6%) Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+I++L + + ++L ++ I I+Q+IP L L F + F IG Sbjct: 27 TAMIIAILVAVPLGIVLTRHKKLAEPIIGIAAIIQTIPSLALLGFMLPIFG-------IG 79 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +L AI A+ + + + Y + + L + R ++ Q W + +P S+P Sbjct: 80 -KLPAIIALTLYALLPILRNTYTGILGVDPALVDAGRGMGMTSRQILWMVELPLSLP 135 >gi|332561409|ref|ZP_08415722.1| glycine betaine/L-proline ABC transporter inner membrane protein [Rhodobacter sphaeroides WS8N] gi|332273911|gb|EGJ19229.1| glycine betaine/L-proline ABC transporter inner membrane protein [Rhodobacter sphaeroides WS8N] Length = 313 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 24/175 (13%) Query: 68 TTLRMLSAMV-ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 TTL +++A V + ++ LA KS R + P LD MQ+IP +L V M L Sbjct: 104 TTLAIVNAAVALCVIIGLPLGVLAGKSDRFEAAVRPFLDTMQTIPAFVYL---VPVVMLL 160 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G V G + IFA+ + +T + N+ + E +R+F + Q + + +P Sbjct: 161 GIGNVSGVIVTIIFAL--PPLVRLT---SLGIRNVNPGVVEAARAFGATPRQILFKVELP 215 Query: 187 FSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + P GL +M+S+S VV + MI V G+G+ + A+ D Sbjct: 216 LATPTILAGLNQTIMLSLS----MVVIASMISV-------KGLGNEVLRAMGRLD 259 >gi|54303455|ref|YP_133448.1| putative permease [Photobacterium profundum SS9] gi|46916885|emb|CAG23648.1| putative permease [Photobacterium profundum SS9] Length = 296 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI-FTSQVWN 149 A+S R+ V+ P+LDIMQ++P +L V M L GK+ G I+A+ ++ N Sbjct: 129 ARSNRVQSVVTPMLDIMQTMPAFVYLIPVV---MLLGIGKIPGVIAVVIYAVPPVIRLTN 185 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + + ++ E + ++ S Q+ + + +P +MP ++ + ++ VV Sbjct: 186 LGIRL------VDEEVLEAATAYGASPMQRLFGVQIPLAMPNIMAGINQTIMMALAMVVI 239 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + MI V G+G + +I Q L L ++ + ++D++ Sbjct: 240 ASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIIFDRI 281 >gi|33597601|ref|NP_885244.1| putative permease of ABC transporter [Bordetella parapertussis 12822] gi|33574029|emb|CAE38352.1| putative permease of ABC transporter [Bordetella parapertussis] Length = 257 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547 T W + + LP + P +TGA A G AW A I +E + +G GLG +A S Sbjct: 164 TRWGLVKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 E V+ +L++ +++F+ L Sbjct: 218 EIADMTGVMTNILVIAVLAALIDQFVLENL 247 >gi|303252162|ref|ZP_07338330.1| putative ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247499|ref|ZP_07529544.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648945|gb|EFL79133.1| putative ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856002|gb|EFM88160.1| ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 249 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 20/204 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q+ T + +++ + + L + A + S+ L L+P+L I Q+IP+ F + Sbjct: 52 QHGQVTFIEIIAGLSLGFLLGVMSALALSLSKWLNGFLLPLLVISQAIPV-----FAIAP 106 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + L+ G + +++A I V T + Y L N P+ E++++ + Sbjct: 107 LLVLWLGYGMASKIAMTVLIIYFPV---TAACYDGLRNTPKAYLELAKTLEIKPLAMLLL 163 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P L + +++S V VVG+ V G+G Y+ L + +L Sbjct: 164 VRLPAALPVLASGLRIAVS------VVPIGAVVGEWVGSSQGLG-YLMLHANARMQTDLL 216 Query: 243 YAMLTMLGVI-----FLYDQLLFR 261 +A LT+L ++ F+ D+LL R Sbjct: 217 FAALTVLLLMTLCLYFITDRLLRR 240 >gi|284033391|ref|YP_003383322.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] gi|283812684|gb|ADB34523.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] Length = 265 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 23/192 (11%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI----------VDIVPITLDVHSLPQ 63 R FP + +LA V V ++ +L+ ++ D+ +D + L LP+ Sbjct: 4 RFFPVLAHVLALVAVAPLLWVLVSVLKPA---EDVFSFGWPSSWTLDNLQYVLLKFPLPR 60 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV---PILDIMQSIPILGFLTFTV 120 + + + ++ VI+L F + A A+ R G L+ + ++ S+P++ F V Sbjct: 61 FLLNSAIVSVAVTVIALFFHSMAAYALARLRFPGRALIFSGIMSTLLVSLPVILVPLFLV 120 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +NL G + +IF F F + Q NIPR+LEE + W+++ Sbjct: 121 AKQLNLL-DSYAGLIVPSIFHAFG------IFLLRQYYLNIPRELEEAADLDGCGYWRRY 173 Query: 181 WYLGVPFSMPGL 192 W + +P S P L Sbjct: 174 WSVILPLSRPVL 185 >gi|161620534|ref|YP_001594420.1| binding-protein-dependent transport systems inner membrane component [Brucella canis ATCC 23365] gi|260568230|ref|ZP_05838699.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|161337345|gb|ABX63649.1| binding-protein-dependent transport systems inner membrane component [Brucella canis ATCC 23365] gi|260154895|gb|EEW89976.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] Length = 284 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 127 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 174 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 175 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 232 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252 G G+GSYI A DL + A+L+++G+I Sbjct: 233 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 267 >gi|134301039|ref|YP_001114535.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] gi|134053739|gb|ABO51710.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] Length = 278 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 18/152 (11%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 T +L+A +IS++ L A+ +++P+LD MQ++P +L ++F L Sbjct: 93 ETLALVLTAALISIIVGIPTGILCARKDTARDLVMPLLDFMQTMPAFVYL-IPAIFFFGL 151 Query: 127 YPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 GKV G + IFA+ T ++ N+ + +P +L E + +F + QK + + Sbjct: 152 --GKVPGVIASVIFAMPPTIRLTNL------GIRQVPAELIEAADAFGSTPTQKLLKVQL 203 Query: 186 PFS----MPGLVWNMMMSMSGGWFFVVASEMI 213 P + M G+ +M+++S VV + MI Sbjct: 204 PLAKQTIMAGINQCIMLALS----MVVIASMI 231 >gi|119387604|ref|YP_918638.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119378179|gb|ABL72942.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] Length = 259 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 47/227 (20%), Positives = 87/227 (38%), Gaps = 32/227 (14%) Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 D+FW V AW G I H +W IT+ + +I ++ + Sbjct: 45 DVFWQIV--------AWFRSGEIWRH---------LW---ITLIEAALAFVIGAVAAMIA 84 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 G W+ RP +++ P+ + A P V P+ +W + + F ++I Sbjct: 85 GFWLARRPKLAAVFDPYVKAANALPRVVLAPIFT-----LWFGLGIWSKVALGFTLVFFI 139 Query: 465 L-FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + FNV G + A ++ + R++ LP + + + G A ++V Sbjct: 140 VFFNVYQGVKEVNRTVLQNARMLGMSERQLLRHVYLPSALSWVFSSLHVSIGFAVVGAVV 199 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 E + GLG IA++ V G+ ++ FVL ++ Sbjct: 200 GEYLG------SSAGLGYLIAQAEGMFDIAGVFAGMFVLSAFVLLID 240 >gi|322411670|gb|EFY02578.1| ABC-type glycine betaine transport system protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 508 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 29/182 (15%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 +++I+LL A L ++S+R +++ + + Q+IP L L + P IG Sbjct: 29 SLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI-------PLMGIGT 81 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 L A+ A+ ++ + + L I L E +F ++ W++ +P +MP + Sbjct: 82 -LPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI-- 138 Query: 195 NMMMSMSGGWFFVVASEMIVVGD----TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 MSG V S ++++G ++I G+GS+I L I + A L M+G Sbjct: 139 -----MSG----VRTSAVMIIGTATLASLIGAGGLGSFILLGIDRNN------ANLIMIG 183 Query: 251 VI 252 I Sbjct: 184 AI 185 >gi|77407277|ref|ZP_00784223.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77174114|gb|EAO77037.1| phosphate ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 268 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 27/124 (21%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 102 PILDIMQSIP--ILGFLTFTVV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 P ++++ IP + GF+ ++ + +++ G G L+ + +F + +TF S Sbjct: 82 PAVELLVGIPSVVYGFIGLQIIVPFVRSIFGGTGFGI-LSGVCVLFVMILPTVTFMTVDS 140 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +PR +E S + + WQ W + + + PG+ ++ M+ + +A +M+V Sbjct: 141 LRAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAIVFGMARAFGEALAIQMVVGNS 200 Query: 218 TVIP 221 ++P Sbjct: 201 AILP 204 >gi|99078629|ref|YP_611887.1| binding-protein-dependent transport systems inner membrane component [Ruegeria sp. TM1040] gi|99035767|gb|ABF62625.1| binding-protein-dependent transport systems inner membrane component [Ruegeria sp. TM1040] Length = 245 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T +L +VI + + A A SR +++ PIL Q++P+ F + + L+ Sbjct: 55 TAAEVLIGLVIGVALGVLTALHLATSRTARLLVQPILVFTQALPV-----FALAPILTLW 109 Query: 128 PGKVIGAELA-AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G + +++A A+ I+ + +T S + L P+ +++R+ + + + W++ VP Sbjct: 110 LGFGLWSKIAMAVLIIY----FPVTASFFDGLMRTPQGYLDLARTMQATPLRVLWHIRVP 165 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++P L + ++ V A V+G+ V G+G + LA + AML Sbjct: 166 AALPSLASGIRLAA------VYAPIGAVIGEWVGASRGLGYLMLLANGRAKTDLMFAAML 219 Query: 247 TMLGVIFLYDQLLFR 261 T LGV + L+ R Sbjct: 220 T-LGVFSVLLHLVVR 233 >gi|332715832|ref|YP_004443298.1| spermidine/putrescine ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325062517|gb|ADY66207.1| spermidine/putrescine ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 302 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 8/87 (9%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 M ++ +L I + L E +R +GWQ W + +P + PG M+ G FVV Sbjct: 187 MVTPIFNTLMRIDKSLIEAARDAGATGWQTLWNVIIPLAKPG--------MAIGSIFVVT 238 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQ 236 M + G + +AL +K Q Sbjct: 239 LVMADFSTVQVMSGGQSASVALMMKNQ 265 >gi|325264908|ref|ZP_08131636.1| sulfonate ABC transporter, permease protein SsuC [Clostridium sp. D5] gi|324029897|gb|EGB91184.1| sulfonate ABC transporter, permease protein SsuC [Clostridium sp. D5] Length = 268 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 10/179 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV +A++ + +G G P + P L+ P + P+ + Sbjct: 72 SLKRVASGFGLAAVCGLILGFLSGGIPIARRLVDPLIHLVRTVPGIGWLPVAIVWFGIGE 131 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N ++L F I N + G S P G+ +R +ILP FP Sbjct: 132 GNTLFLIALASFF----PIYINTVHGTSQVPEVTLRAGRMLGAKGFALFRTVILPAAFPD 187 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G G AW ++ EV T GLGA + + G V+ ++++ C Sbjct: 188 VAVGLRLGLGVAWAYLVLGEVTGV------TEGLGAVMTDGRMLGHVDIVLATMIVIAC 240 >gi|146337666|ref|YP_001202714.1| putative sulfonate ABC transporter permease (ssuC/ycbM-like) [Bradyrhizobium sp. ORS278] gi|146190472|emb|CAL74471.1| putative sulfonate ABC transporter, permease protein (ssuC/ycbM-like) [Bradyrhizobium sp. ORS278] Length = 282 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 24/189 (12%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 +RRL + P + +++IP + ++ +++ KV + F ++ Sbjct: 112 ARRL---VDPTIQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVY--------L 160 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + ++ ++ R + EV R FRLSG + +P +P V + + + GW FVVA+E Sbjct: 161 GLTGAILSVDRKIVEVGRVFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFVVAAEF 220 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR----PMIVWSN 268 + + G+G Y+ + ++ A + A + + VI L P++ W + Sbjct: 221 MGASE------GLG-YLLIDGQQLGKPAQIVAAIVIFAVIGKATDWLLEIATAPLLRWQD 273 Query: 269 KFRLERTTG 277 F R +G Sbjct: 274 SF--ARQSG 280 >gi|328880173|emb|CCA53412.1| Choline or glycine betaine ABC transporter,permease protein [Streptomyces venezuelae ATCC 10712] Length = 665 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 T ++L+A+ ++LL AA+S RLG L P+LD+ Q++P +L V F Sbjct: 476 TLSQVLAAVAVTLLLGVALGIAAARSTRLGRALRPVLDVFQTMPQFVYLIPVVALF 531 >gi|283769434|ref|ZP_06342332.1| ABC transporter, permease protein [Bulleidia extructa W1219] gi|283103959|gb|EFC05344.1| ABC transporter, permease protein [Bulleidia extructa W1219] Length = 251 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Query: 464 ILFNVIAGASAFPN-DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I ++ I A N +E++ FHI+ + +RY+ L I PY T A G W A + Sbjct: 132 IFYDQILKALESQNPSLEEMSIVFHISKKKKFRYLTLAQILPYLETACSLAIGFCWKAGM 191 Query: 523 VSEVASWGHIHLRTTGLGAYIAEST 547 +EV I L +G+ + E+ Sbjct: 192 AAEV-----IGLPDGAIGSQLHEAK 211 >gi|260598009|ref|YP_003210580.1| glycine betaine/carnitine/choline transport system permease opuCB [Cronobacter turicensis z3032] gi|260217186|emb|CBA31041.1| Glycine betaine/carnitine/choline transport system permease protein opuCB [Cronobacter turicensis z3032] Length = 215 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P+LG T ++ F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPVLGLATLVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++P L E R ++ WQ+ ++ +P ++P Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|254461005|ref|ZP_05074421.1| glycine betaine transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206677594|gb|EDZ42081.1| glycine betaine transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 342 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 30/152 (19%), Positives = 76/152 (50%), Gaps = 22/152 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 +KS +L +VP+LD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 174 SKSDKLQRSVVPVLDLLQTLPTFVYL-IPLIFLFSVTESKLYGIAIILYAIVPVVRLTDL 232 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + + +D+ E + +F ++ QK + +P ++P G+ +MMS++ Sbjct: 233 GIRL------VDQDVIEAANAFGMNSRQKLMGVELPLALPNIMAGINQTIMMSLA----- 281 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 282 -----MVVIA-SLVSAPGLGVNVLRGIRNLEL 307 >gi|3420607|gb|AAC31906.1| ABC transporter membrane subunit [Pseudomonas putida] Length = 265 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + +++++P L + +++F K+ L +F I+ + Y + N+ Sbjct: 102 VQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIY--------LNTYHGIRNVDP 153 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L E++RS+ LSG+ F + +P ++P ++ + ++ W ++V +T+ Sbjct: 154 ALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWL------TLIVAETISANA 207 Query: 224 GIGSYIALAIKE---QD---LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 GIG Y+A+ +E D L +LYA+L L L + L R + W +++ + G Sbjct: 208 GIG-YLAMNAREFLQTDVVVLAIVLYAVLGKLA--DLAARGLERVWLRWHPAYQVAKKEG 264 >gi|70733220|ref|YP_262993.1| aliphatic sulfonates ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68347519|gb|AAY95125.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 262 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G A Sbjct: 128 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFAL 187 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S ++G+G + E VVL +++ Sbjct: 188 GFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAAR 241 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 242 GLERVWLRWHPAY 254 >gi|325497213|gb|EGC95072.1| ABC transporter membrane protein, membrane component [Escherichia fergusonii ECD227] Length = 216 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + PILG T +V F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPILGTATLLLTIPSVALFGLMIPLFSLFGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++P L E R ++ WQ+ ++ +P ++P Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|319790873|ref|YP_004152513.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315593336|gb|ADU34402.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 293 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 12/163 (7%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T++RV ++A++ +P+GI +G + + +PF PA+ F PL++ Sbjct: 102 MTVWRVFGGFLLAAVFAVPLGIAMGTWKTVEAFFEPFVSFCRYLPASAFIPLLILWAGLG 161 Query: 445 HLNPNLWLSLLMIF-GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+IF G+ + I+ V D E A + +++PG Sbjct: 162 EMQ-----KLLVIFIGSFFQIVLMVAVTVGGARRDLVEAAYTLGANSRGIVARVLIPGAA 216 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P G AW IV+E+ ++G+G I +S Sbjct: 217 PGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDS 253 >gi|108799491|ref|YP_639688.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. MCS] gi|119868604|ref|YP_938556.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. KMS] gi|108769910|gb|ABG08632.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. MCS] gi|119694693|gb|ABL91766.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. KMS] Length = 279 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G D +VA S + R+I++P + P+ +TG + G A ++++E+ + Sbjct: 173 GVQEIDRDLLDVAKSLRANRLQTLRWIVVPSLVPWLITGLRLSIGIALIGAVIAELIAAS 232 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GLG YI S+ V G+ ++ +AL + L Sbjct: 233 Q------GLGYYIKYSSNLLDVTGVFAGLAVITVVAIALEQLL 269 >gi|332298529|ref|YP_004440451.1| ABC-type transporter, integral membrane subunit [Treponema brennaborense DSM 12168] gi|332181632|gb|AEE17320.1| ABC-type transporter, integral membrane subunit [Treponema brennaborense DSM 12168] Length = 257 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ++ V AG + + A + + R RY+ LP PY+ +GA++A G +W Sbjct: 139 VIAAVSAGIGSADRKLLDCARVYGFSAARTARYVYLPSCTPYFWSGALSAFGLSWKVVAA 198 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 EV S + R G Y A+ + + V VLI+ CF L Sbjct: 199 GEVLS---LPRRAAGTLLYNAKVHLETADVFAVTIVLIILCFTL 239 >gi|298675885|ref|YP_003727635.1| binding-protein-dependent transporter inner membrane subunit [Methanohalobium evestigatum Z-7303] gi|298288873|gb|ADI74839.1| binding-protein-dependent transport systems inner membrane component [Methanohalobium evestigatum Z-7303] Length = 260 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 18/172 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++I++ IP L ++ F +V+ + AA F IF V+ + + Y ++ Sbjct: 98 PIIEILRPIPPLAWIPFALVWLGLTHT--------AAGFVIFVGAVFPIIINTYTGFKSV 149 Query: 162 PRDLEEVSRSFRLSGWQKF-WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 P+ E ++ + ++ P S+P + + + M GW +VA+E V Sbjct: 150 PKINVEAAKVLGCVKQRSLIRHIAFPSSLPSITAGIRIGMGVGWMCLVAAEFFGVSKN-- 207 Query: 221 PLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVIF--LYDQLLFRPMIVWSN 268 G+G + + + D + + ML +LG+I ++ + + + ++ W + Sbjct: 208 ---GLGYKLWWHYGLHQMDFVLMYMFMLGILGLIIDKVFRKYIDKRLLKWQS 256 >gi|222053468|ref|YP_002535830.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221562757|gb|ACM18729.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 255 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 33/174 (18%), Positives = 78/174 (44%), Gaps = 8/174 (4%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 ++ P D+V + D+ +L + + R +A ++++L + R Sbjct: 35 EQFPAPSDVVRAIVELADMGTLWSHMGISLARFGAAYLLAVLAGIPLGLFLGRFIRCHKA 94 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 + P++ +++ I + + V++F IG A+F IF + + + + ++ Sbjct: 95 IDPLIQVLRPISPIAWFPLAVLWFG-------IG-NAPAVFIIFLASFYPVLLATISAVR 146 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 +P +V+ +F F + VP + PG++ + +++ GW +VA EM+ Sbjct: 147 AVPPVYLKVAGNFGARADMTFLRVIVPAAFPGIMVGLHIAVGTGWIHLVAGEML 200 >gi|52081034|ref|YP_079825.1| phosphate ABC transporter permease [Bacillus licheniformis ATCC 14580] gi|52786411|ref|YP_092240.1| hypothetical protein BLi02675 [Bacillus licheniformis ATCC 14580] gi|319645009|ref|ZP_07999242.1| PstC protein [Bacillus sp. BT1B_CT2] gi|52004245|gb|AAU24187.1| phosphate ABC transporter (permease) [Bacillus licheniformis ATCC 14580] gi|52348913|gb|AAU41547.1| PstC [Bacillus licheniformis ATCC 14580] gi|317392818|gb|EFV73612.1| PstC protein [Bacillus sp. BT1B_CT2] Length = 309 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM- 154 VL P+++++ IP + GF+ TV V F++ + G L A + + S+ Sbjct: 125 VLQPVVELLVGIPSVVYGFIGLTVLVPFISQFKSSGSGHSLLAGTIVLAVMILPTVTSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L ++P++L E S + + WQ + +P ++P L+ +++ M+ + +A +M++ Sbjct: 185 TDALMSLPKNLREGSYALGATRWQTIRKVLIPAALPSLLTAVVLGMARAFGEALAVQMVI 244 >gi|15802680|ref|NP_288707.1| putative transport system permease protein [Escherichia coli O157:H7 EDL933] gi|12516435|gb|AAG57262.1|AE005444_12 putative transport system permease protein [Escherichia coli O157:H7 str. EDL933] Length = 385 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAGLVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|290956061|ref|YP_003487243.1| taurine ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260645587|emb|CBG68678.1| putative taurine transport protein (ABC superfamily, membrane) [Streptomyces scabiei 87.22] Length = 257 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 4/116 (3%) Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 ++IA+ I G I PH+ + L P+ PL V + L L Sbjct: 68 LLIAATAGILTGGVIAVVPHLREATSSTIEFLRPIPSVALVPLAV-LLYGSELRSVL--- 123 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 +L+++ + W IL + G +E A S+ + W R+++ P PY +TG Sbjct: 124 VLVVYASFWQILIQTLYGVQDVDPVAEETARSYGLGPWARVRHVLWPSALPYVMTG 179 >gi|170745431|ref|YP_001766888.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] gi|170659032|gb|ACB28086.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] Length = 262 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 6/142 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + + +++ +G+ G P I + ++L+ P PL + Sbjct: 71 SLRRVGIAFVGGAVLGTGIGLLRGRVPEIDALFLVPSELVRPIPPLGLIPLFILWFGIGE 130 Query: 446 LNPNLWLSLLMIFGTQWYI-LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+IF + + I + N AGA A D A S + W+ +R+++LP P Sbjct: 131 TS-----KILLIFLSVFLIAMVNAQAGAGACGLDTLRAARSMGASRWQAFRFVVLPSALP 185 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG A G A + +E+ Sbjct: 186 QIMTGLRVAMGTALTILVAAEL 207 >gi|156934057|ref|YP_001437973.1| hypothetical protein ESA_01883 [Cronobacter sakazakii ATCC BAA-894] gi|156532311|gb|ABU77137.1| hypothetical protein ESA_01883 [Cronobacter sakazakii ATCC BAA-894] Length = 288 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 10/159 (6%) Query: 57 DVHS--LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D+HS LP + +L I + V++ LA S RLG L+ L M + Sbjct: 78 DMHSGELPAKILNSLGTLLKGYAIGSVLALVFSALAI-STRLGRDLLSTLTAMLNPLPAI 136 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 L + + L G +I F + S +W + + + ++P L R++ L Sbjct: 137 ALLPLALLWFGLGQGSLI-------FVLVHSVMWPIALNTWSGFQSVPETLRMAGRNYGL 189 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 SG + + +P ++P ++ + + + W ++A+E++ Sbjct: 190 SGPRLVLNILIPAALPSIISGLKIGWAFAWRTLIAAELV 228 >gi|91974596|ref|YP_567255.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] gi|91681052|gb|ABE37354.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] Length = 286 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 ++ ++ R + EV R+FRLSG + +P +P V + + + GW FVVA+E Sbjct: 169 AIRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFVVAAE 223 >gi|33594811|ref|NP_882454.1| ABC transport system permease protein [Bordetella parapertussis 12822] gi|33599083|ref|NP_886643.1| ABC transport system permease protein [Bordetella bronchiseptica RB50] gi|33564887|emb|CAE39832.1| ABC transport system permease protein [Bordetella parapertussis] gi|33575129|emb|CAE30592.1| ABC transport system permease protein [Bordetella bronchiseptica RB50] Length = 256 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 10/182 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV+V A+ + IP+GI++G + P L P+ + PL + ++ + Sbjct: 70 RVMVGFAAATALAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSWIPL---SLLWFGITE 126 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 S++ + GT L VI A + +G + R +ILP P + Sbjct: 127 TQKYSIVFM-GTFAPALLYVIEATRNIDPLLIRAARNLGASGPQVMRSVILPASLPQIFS 185 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G G +W I +E+ + GLG I E VVLG+ ++ VL Sbjct: 186 GFKVILGLSWTCVISAELVAAKE------GLGFLIMNGKEFFQTDTVVLGMALISVTVLV 239 Query: 569 LN 570 + Sbjct: 240 TD 241 >gi|73748092|ref|YP_307331.1| phosphate ABC transporter, permease protein [Dehalococcoides sp. CBDB1] gi|147668880|ref|YP_001213698.1| phosphate ABC transporter, inner membrane subunit PstC [Dehalococcoides sp. BAV1] gi|289432118|ref|YP_003461991.1| phosphate ABC transporter inner membrane protein [Dehalococcoides sp. GT] gi|73659808|emb|CAI82415.1| phosphate ABC transporter, permease protein [Dehalococcoides sp. CBDB1] gi|146269828|gb|ABQ16820.1| phosphate ABC transporter membrane protein 1, PhoT family [Dehalococcoides sp. BAV1] gi|288945838|gb|ADC73535.1| phosphate ABC transporter, inner membrane subunit PstC [Dehalococcoides sp. GT] Length = 286 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%) Query: 73 LSAMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG- 129 L AMVI++ A L A+ RR+ +L P ++++ IP + + +V M + P Sbjct: 76 LGAMVIAVPLGIACAILLAEVAPRRVRDLLRPAVELLVGIP---SVVYGLVGIMVIVPAV 132 Query: 130 KVIGAELAAIFA---IFTSQVWNMTFSMYQ-SLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + +G +I A + + V S+ + SL +PR E S + S WQ W++ + Sbjct: 133 RNLGGTGYSILAAVLVLSIMVLPTIISISEDSLRAVPRTYREGSLALGASHWQTIWHVLL 192 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P + G+ ++++ M +A M++ +IP Sbjct: 193 PAARSGVGASIVLGMGRAIGETMAMIMVIGNAVIIP 228 >gi|242238796|ref|YP_002986977.1| binding-protein-dependent transporters inner membrane component [Dickeya dadantii Ech703] gi|242130853|gb|ACS85155.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech703] Length = 564 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 40/187 (21%), Positives = 75/187 (40%), Gaps = 13/187 (6%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +LP + R L+ +I + ++ S R + P L +++ + + +L Sbjct: 361 TLPDAMLHSLFRALTGGIIGVSTGWLAGIALGLSTRAEALFAPSLSLLRQVALFAWLPLI 420 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + N GKV LAA F M + ++ + L+EV++ RL + Sbjct: 421 TAWAGNDEGGKVTFVALAAFFP--------MLVASHRGVRQRSAALQEVAQILRLPLSAR 472 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 L +P + P + + +S+ W V +E + GIGS + A + ++ Sbjct: 473 LRVLILPGAAPAMFTGLRLSLIHAWLGTVGAEYFMSSGA-----GIGSLMINAQQLMEMP 527 Query: 240 AILYAML 246 IL ML Sbjct: 528 IILSGML 534 >gi|217976954|ref|YP_002361101.1| binding-protein-dependent transport systems inner membrane component [Methylocella silvestris BL2] gi|217502330|gb|ACK49739.1| binding-protein-dependent transport systems inner membrane component [Methylocella silvestris BL2] Length = 286 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 10/145 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV-PILDIMQSIPILGFLTFTVVYFMNL 126 T LR+ + + + LA S LG L+ P L +++IP + ++ +++F Sbjct: 87 TLLRVGAGFALGVFAGTTLGVLAGASS-LGRALIDPTLQGLRAIPSIAWVPLFILWFGIF 145 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 K+ + F I+ ++ ++ + R + E RSFRL G + P Sbjct: 146 EASKIALIAVGVAFPIY--------LGIFGAILAVDRKIIEAGRSFRLEGVALARRILFP 197 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASE 211 +P V + + GW FVVA+E Sbjct: 198 AVLPHYVVALRSGLGLGWMFVVAAE 222 >gi|91776909|ref|YP_546665.1| binding-protein-dependent transport systems inner membrane component [Methylobacillus flagellatus KT] gi|91710896|gb|ABE50824.1| binding-protein-dependent transport systems inner membrane component [Methylobacillus flagellatus KT] Length = 283 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 36/191 (18%), Positives = 89/191 (46%), Gaps = 16/191 (8%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 +R+ S +++ + LA RR+ + + P++D ++ +P + F+ +++ Sbjct: 94 VRVSSGFLLAAVLALPIGVLAGTFRRVQIFIEPLMDFIRYMPAVAFVPLVLLWCGV---- 149 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E + I IF + M M ++ +P E +++ + + + + +P + Sbjct: 150 ----GEASKIALIFIGTFFQMVLMMAGNVRQVPMAQIEAAQTMGATRRELLFKVILPSAA 205 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P L+ + +++ W ++V +E++ + G+G Y L + L ++A + ++ Sbjct: 206 PALLDTIRVTLGWAWTYLVVAELVAANE------GLG-YAILRAQRFLLTDKIFAGILVI 258 Query: 250 GVI-FLYDQLL 259 G+I + DQLL Sbjct: 259 GLIGLIQDQLL 269 >gi|87311015|ref|ZP_01093140.1| phosphate ABC transporter, permease protein [Blastopirellula marina DSM 3645] gi|87286305|gb|EAQ78214.1| phosphate ABC transporter, permease protein [Blastopirellula marina DSM 3645] Length = 846 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 29/51 (56%) Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + +SL +P L E S S WQ W + +P ++PG++ M+++M+ G Sbjct: 704 ATEESLAAVPNSLREGSYGCGASKWQTIWRIVLPHALPGIMTGMILAMARG 754 >gi|325673711|ref|ZP_08153402.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325555732|gb|EGD25403.1| hydroxymethylpyrimidine ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 271 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAEL 136 +SL+ + A L S L VP+ + Q++PI+ +++F L P KV+ L Sbjct: 83 VSLVVAWALAVLVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KVLVIAL 141 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A F M + + + R+ + RS S WQ+F Y+ +P ++P Sbjct: 142 ATFF--------PMAIGLVEGFASADREAGALLRSMGASKWQQFRYVRLPSALP 187 >gi|262370958|ref|ZP_06064281.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter johnsonii SH046] gi|262314034|gb|EEY95078.1| alkanesulfonate ABC transporter membrane protein [Acinetobacter johnsonii SH046] Length = 271 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ PA PLV+ ++ ++ L L+ + G + I N G + E+ Sbjct: 115 QMIRNIPALALIPLVIL---WFGIDETAKLFLVAV-GVFFPIYINTYHGIRSVDPQLIEM 170 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ +T W+ ++ IILPG P + G + G W IV+E S G+G Sbjct: 171 GKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETIS------AQAGIGYM 224 Query: 543 IAESTEKGSFPEVVLGVLIMC-------CFVLALNRFL--WHPLY 578 + E V++G+L+ + L ++L WH Y Sbjct: 225 TMNAREFLQTDIVLVGILLYALLGKLADVLAVTLEKYLLRWHAGY 269 >gi|224024789|ref|ZP_03643155.1| hypothetical protein BACCOPRO_01517 [Bacteroides coprophilus DSM 18228] gi|224018016|gb|EEF76023.1| hypothetical protein BACCOPRO_01517 [Bacteroides coprophilus DSM 18228] Length = 398 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 42/198 (21%), Positives = 87/198 (43%), Gaps = 14/198 (7%) Query: 75 AMVISLLFTFVYATLAAK--SRRLGMVLVPILDIMQSIP--ILGFLTFTVV--YFMNLYP 128 A++I+L F + A+ S + L P+++++ IP + GF V+ + + + Sbjct: 186 AILIALPFGLAVSIYLAEVASPEMRKFLKPVIELLNGIPSVVYGFFGLAVIVPFLQHTFH 245 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 V + LA + + + ++ + PR + E S + + WQ + + +PFS Sbjct: 246 LPVGESGLAGSLVLAIMALPTIITVAEDAMRSCPRSMREASLALGATQWQTIYKVVIPFS 305 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI-------PLPGIGSYIALAIKEQDLLAI 241 + G+ +++ + G + ++V G+ + PL I + IA + E Sbjct: 306 ISGITSGVVLGI-GRAIGETMAVLMVTGNAAVMPASLLEPLRTIPATIAAELGEAPAGGA 364 Query: 242 LYAMLTMLGVIFLYDQLL 259 Y L +LGVI + L+ Sbjct: 365 HYQALFLLGVILFFITLI 382 >gi|218548807|ref|YP_002382598.1| ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218356348|emb|CAQ88966.1| putative ABC transporter membrane protein, membrane component [Escherichia fergusonii ATCC 35469] gi|324113372|gb|EGC07347.1| inner membrane transport system [Escherichia fergusonii B253] Length = 216 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + PILG T +V F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPILGTATLLLTIPSVALFGLMIPLFSLFGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++P L E R ++ WQ+ ++ +P ++P Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|326798242|ref|YP_004316061.1| glycine/betaine ABC transporter permease [Sphingobacterium sp. 21] gi|326549006|gb|ADZ77391.1| ABC-type transporter, integral membrane subunit [Sphingobacterium sp. 21] Length = 278 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 23/180 (12%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + +T +LS+ +I+L+ +AK++ ++ P+LD+MQ++P +L V++ Sbjct: 86 EETMQTLALILSSTLIALVIAVPLGIWSAKNQTAHKIIRPLLDLMQTMPAFVYLIPAVLF 145 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F GK+ GA IFA+ V T + Q + D+ E +RS + Q Sbjct: 146 F---SIGKLPGAFATIIFAM-PPAVRLTTLGIEQ----VQGDVLEAARSLGATQRQILLK 197 Query: 183 LGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++ G+ +++S+S VV + MI G G+G + I D+ Sbjct: 198 VELPLALKTILTGINQTILLSLS----MVVIAGMIAAG-------GLGEKVLEGINNLDI 246 >gi|315122235|ref|YP_004062724.1| proline/glycine betaine ABC transporter, permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495637|gb|ADR52236.1| proline/glycine betaine ABC transporter, permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 281 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T +L + IS+L AA R ++ +LD MQ+IP +L +V Sbjct: 91 QETTETLSLVLVSTSISMLIGVPLGVFAAWYPRFYSIIRLLLDSMQTIPTFVYLIPALVL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG V +F+I TS + + P L+E +R+F + +Q F Sbjct: 151 FGLGMVPGMVA----TIVFSIPTSVRLT-----RLGIISTPPVLKEAARAFGATPFQVFR 201 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +PF++P +V ++ ++ VV + ++ Sbjct: 202 KVELPFAIPQIVASLTQTIMLSLSMVVVTALV 233 >gi|297197917|ref|ZP_06915314.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] gi|197717139|gb|EDY61173.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] Length = 299 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 33/71 (46%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++ G + + NV AG E S ++ W R++ILPG P +TG + Sbjct: 170 IITLGVTFPLYLNVYAGIRGVDAQLIEAGESLGLSRWGLVRHVILPGALPGALTGLRYSL 229 Query: 515 GGAWNASIVSE 525 G AW A + +E Sbjct: 230 GIAWLALVFAE 240 >gi|221064974|ref|ZP_03541079.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] gi|220709997|gb|EED65365.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] Length = 282 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 20/217 (9%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 +A+ + R+L V L + TL SR + L+P + + IP+LG++ F ++ Sbjct: 79 HAAASLQRVLVGFVAGSLLGLLLGTLMGLSRSVEAYLLPSFNALVQIPVLGWMPFVLLLV 138 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 P K I AA+ + T + Q P++L EV + + Q+ + Sbjct: 139 GIGEPLKYILIAKAALVPV--------TLATLQGFRQAPQNLLEVGCVYGYTRRQQVLEI 190 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P L + + + W +V E++ + G+G I + L ++ Sbjct: 191 VLPTALPTLFTGLRLGFTKAWLSLVVVELVASSE------GLGYLIVYGRQLFQLDLVMA 244 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280 A++ + + +L D+LL + + RL G+ P Sbjct: 245 AVIIVGALGYLIDRLLD------AAEARLAARNGVRP 275 >gi|228996491|ref|ZP_04156130.1| Spermidine/putrescine ABC transporter, permease [Bacillus mycoides Rock3-17] gi|228763123|gb|EEM12031.1| Spermidine/putrescine ABC transporter, permease [Bacillus mycoides Rock3-17] Length = 266 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 A S D +E A+ T W+ +RY+ PGI P G I+A + SI V S+ Sbjct: 147 ARLSGMGRDLEEAANDLGATPWQTFRYVTFPGIAP----GVISAALLTFTLSIDDFVISF 202 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEV 555 +T L YI ++G PE+ Sbjct: 203 FVSGPGSTTLPLYIYSMVKRGVTPEI 228 >gi|225628905|ref|ZP_03786939.1| binding-protein-dependent transport systems inner membrane component [Brucella ceti str. Cudo] gi|237817212|ref|ZP_04596204.1| binding-protein-dependent transport systems inner membrane component [Brucella abortus str. 2308 A] gi|260756762|ref|ZP_05869110.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 6 str. 870] gi|260760192|ref|ZP_05872540.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 4 str. 292] gi|260763431|ref|ZP_05875763.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 2 str. 86/8/59] gi|260882577|ref|ZP_05894191.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 9 str. C68] gi|261217092|ref|ZP_05931373.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M13/05/1] gi|261220306|ref|ZP_05934587.1| binding-protein-dependent transport system inner membrane component [Brucella ceti B1/94] gi|261313461|ref|ZP_05952658.1| binding-protein-dependent transport system inner membrane component [Brucella pinnipedialis M163/99/10] gi|261319303|ref|ZP_05958500.1| binding-protein-dependent transport system inner membrane component [Brucella pinnipedialis B2/94] gi|261319962|ref|ZP_05959159.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M644/93/1] gi|261753459|ref|ZP_05997168.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 3 str. 686] gi|265986697|ref|ZP_06099254.1| binding-protein-dependent transport system inner membrane component [Brucella pinnipedialis M292/94/1] gi|265996347|ref|ZP_06108904.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M490/95/1] gi|297249709|ref|ZP_06933410.1| sulfonate/nitrate/taurine transport system permease [Brucella abortus bv. 5 str. B3196] gi|225616751|gb|EEH13799.1| binding-protein-dependent transport systems inner membrane component [Brucella ceti str. Cudo] gi|237788025|gb|EEP62241.1| binding-protein-dependent transport systems inner membrane component [Brucella abortus str. 2308 A] gi|260670510|gb|EEX57450.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 4 str. 292] gi|260673852|gb|EEX60673.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 2 str. 86/8/59] gi|260676870|gb|EEX63691.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 6 str. 870] gi|260872105|gb|EEX79174.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 9 str. C68] gi|260918890|gb|EEX85543.1| binding-protein-dependent transport system inner membrane component [Brucella ceti B1/94] gi|260922181|gb|EEX88749.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M13/05/1] gi|261292652|gb|EEX96148.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M644/93/1] gi|261298526|gb|EEY02023.1| binding-protein-dependent transport system inner membrane component [Brucella pinnipedialis B2/94] gi|261302487|gb|EEY05984.1| binding-protein-dependent transport system inner membrane component [Brucella pinnipedialis M163/99/10] gi|261743212|gb|EEY31138.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 3 str. 686] gi|262550644|gb|EEZ06805.1| binding-protein-dependent transport system inner membrane component [Brucella ceti M490/95/1] gi|264658894|gb|EEZ29155.1| binding-protein-dependent transport system inner membrane component [Brucella pinnipedialis M292/94/1] gi|297173578|gb|EFH32942.1| sulfonate/nitrate/taurine transport system permease [Brucella abortus bv. 5 str. B3196] Length = 284 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 127 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 174 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 175 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 232 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252 G G+GSYI A DL + A+L+++G+I Sbjct: 233 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 267 >gi|160915350|ref|ZP_02077562.1| hypothetical protein EUBDOL_01358 [Eubacterium dolichum DSM 3991] gi|158432741|gb|EDP11030.1| hypothetical protein EUBDOL_01358 [Eubacterium dolichum DSM 3991] Length = 280 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 17/116 (14%) Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 TV+ + + G+++ E A + + + + M + SLC + + L E S + Q Sbjct: 128 TVLSWFGIDTGEILYTETAVLLGMVYNFIPFMILQINTSLCKMDKSLLEASNDLGANKLQ 187 Query: 179 KFWYLGVPFSMPGLVWNMMMS-------------MSGGWFF----VVASEMIVVGD 217 F + +P S+PG+V + + + GG FF V+ ++ I VG+ Sbjct: 188 TFLRVTLPLSLPGVVSGITLVFLPAVSSFFIPKLLGGGQFFLIGNVIENQFITVGE 243 >gi|134045438|ref|YP_001096924.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C5] gi|132663063|gb|ABO34709.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C5] Length = 253 Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV++ IA IP+G+ +G+ I+ + +L P + PL ++++ Sbjct: 59 VSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLLDMSVELFRPIPPLAWVPL---ALAWF 115 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + ++ G + IL N I+G + P E A + + + +++P P Sbjct: 116 GIGES-SMHFIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGSTKDILKSVVVPASSP 174 Query: 505 YYVTGAITACGGAWNASIVSEV 526 +TG G AW + +E+ Sbjct: 175 DILTGLRVGAGIAWMCVVAAEM 196 >gi|15832271|ref|NP_311044.1| transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|168750501|ref|ZP_02775523.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168757703|ref|ZP_02782710.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168764220|ref|ZP_02789227.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168771595|ref|ZP_02796602.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168777293|ref|ZP_02802300.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168783699|ref|ZP_02808706.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168788931|ref|ZP_02813938.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC869] gi|168801190|ref|ZP_02826197.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC508] gi|195935501|ref|ZP_03080883.1| putative transport system permease protein [Escherichia coli O157:H7 str. EC4024] gi|208808863|ref|ZP_03251200.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208812541|ref|ZP_03253870.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4045] gi|209397432|ref|YP_002271532.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4115] gi|217326974|ref|ZP_03443057.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. TW14588] gi|254794023|ref|YP_003078860.1| putative ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261223416|ref|ZP_05937697.1| predicted transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259034|ref|ZP_05951567.1| predicted transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291283378|ref|YP_003500196.1| ABC transporter quaternary amine uptake (QAT) family, permease protein [Escherichia coli O55:H7 str. CB9615] gi|13362486|dbj|BAB36440.1| putative transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|187767440|gb|EDU31284.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188015312|gb|EDU53434.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188999036|gb|EDU68022.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189355364|gb|EDU73783.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189359702|gb|EDU78121.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189365735|gb|EDU84151.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189371415|gb|EDU89831.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC869] gi|189376603|gb|EDU95019.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC508] gi|208728664|gb|EDZ78265.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208733818|gb|EDZ82505.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4045] gi|209158832|gb|ACI36265.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209766438|gb|ACI81531.1| putative transport system permease protein [Escherichia coli] gi|209766440|gb|ACI81532.1| putative transport system permease protein [Escherichia coli] gi|209766442|gb|ACI81533.1| putative transport system permease protein [Escherichia coli] gi|209766444|gb|ACI81534.1| putative transport system permease protein [Escherichia coli] gi|209766446|gb|ACI81535.1| putative transport system permease protein [Escherichia coli] gi|217319341|gb|EEC27766.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. TW14588] gi|226237485|dbj|BAH47007.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli O55:H7] gi|254593423|gb|ACT72784.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290763251|gb|ADD57212.1| ABC transporter, quaternary amine uptake (QAT) family, permease protein [Escherichia coli O55:H7 str. CB9615] gi|320192254|gb|EFW66899.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia coli O157:H7 str. EC1212] gi|320641196|gb|EFX10674.1| ABC transporter quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. G5101] gi|320646584|gb|EFX15495.1| ABC transporter quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H- str. 493-89] gi|320651839|gb|EFX20214.1| ABC transporter quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H- str. H 2687] gi|320657563|gb|EFX25361.1| ABC transporter quaternary amine uptake (QAT) family, permease protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663169|gb|EFX30478.1| ABC transporter quaternary amine uptake (QAT) family, permease protein [Escherichia coli O55:H7 str. USDA 5905] gi|320667920|gb|EFX34823.1| ABC transporter quaternary amine uptake (QAT) family, permease protein [Escherichia coli O157:H7 str. LSU-61] gi|326339472|gb|EGD63283.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia coli O157:H7 str. 1125] gi|326343934|gb|EGD67695.1| Osmoprotectant ABC transporter permease protein YehY [Escherichia coli O157:H7 str. 1044] Length = 385 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAGLVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|325263383|ref|ZP_08130117.1| sugar ABC transporter, permease protein [Clostridium sp. D5] gi|324031092|gb|EGB92373.1| sugar ABC transporter, permease protein [Clostridium sp. D5] Length = 293 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 6/127 (4%) Query: 453 SLLMIFGTQW--YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 S+++I G W + +F IAG A P D+ E A + W+ +R+I LP + P + Sbjct: 160 SVILIEGWMWSGFNMFIFIAGLQAIPADYYESACIEGASKWKQFRHITLPLLIPSFTIII 219 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE----VVLGVLIMCCFV 566 G+ + V + G T L ++ ++ G E V+ LI+ C Sbjct: 220 TLNITGSLKVFDLIYVLTKGGPGFDTQVLSTFVYKAFGLGLLGESSAASVILSLIVVCIS 279 Query: 567 LALNRFL 573 LNR+L Sbjct: 280 FLLNRYL 286 >gi|239625201|ref|ZP_04668232.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519431|gb|EEQ59297.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 263 Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 13/185 (7%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 + ++I IP+GI + + I+P LL P + PL + L P +L+ Sbjct: 82 MGAVIGIPMGILMAWNRFADMFIRPLFDLLRPIPGLAWIPLFILLFG-IGLLPK---ALV 137 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + + + N G + V F + + I +P P TG A G Sbjct: 138 IFIASLIACVVNAYTGIRQTKDLHLWVGDVFGASDMQKLFKIAIPTATPMIFTGLRVALG 197 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVLALNRFLW 574 AW A + +E+ + + GLG Y+ + S P++VL G++ + LA++R L Sbjct: 198 SAWTALVAAELLA------SSNGLG-YMIQQARSISRPDLVLVGMITIGIVGLAMDRLL- 249 Query: 575 HPLYL 579 H L L Sbjct: 250 HKLEL 254 >gi|295706799|ref|YP_003599874.1| aliphatic sulfonates ABC transporter permease SsuC [Bacillus megaterium DSM 319] gi|294804458|gb|ADF41524.1| aliphatic sulfonates ABC transporter, permease protein SsuC [Bacillus megaterium DSM 319] Length = 284 Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 10/180 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ R + + + + + G+ +GF + P Q+L P PL + + Sbjct: 88 ISILRAAIGFAVGAGLGLLFGVIVGFSKRTEHYMDPSIQMLRTVPHLALAPLFILWFGFG 147 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ LL+ G + I N G + +VA + W+ +ILP P Sbjct: 148 EISK----ILLIANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALP 203 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G AW +V+E+ + G+G I ++ + V +G++I Sbjct: 204 NILLGVRLSLGIAWLGLVVAELMG------ASEGVGYMIMDARQFSQTDVVFVGIIIFAV 257 >gi|229029558|ref|ZP_04185638.1| Sugar ABC transporter, permease protein [Bacillus cereus AH1271] gi|228731757|gb|EEL82659.1| Sugar ABC transporter, permease protein [Bacillus cereus AH1271] Length = 245 Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 TF + Q +P++LEE +R + +Q +WY+ +P + PGL+ Sbjct: 124 TFLLRQFFMGVPKELEEAARLDGCNHFQIYWYVMLPLAKPGLI 166 >gi|156933913|ref|YP_001437829.1| hypothetical protein ESA_01739 [Cronobacter sakazakii ATCC BAA-894] gi|156532167|gb|ABU76993.1| hypothetical protein ESA_01739 [Cronobacter sakazakii ATCC BAA-894] Length = 216 Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P+LG T ++ F + P G+ IGA L AI A+F + + + + +L Sbjct: 51 ATPVLGLATLVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 109 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++P L E R ++ WQ+ ++ +P ++P Sbjct: 110 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 141 >gi|110635308|ref|YP_675516.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium sp. BNC1] gi|110286292|gb|ABG64351.1| binding-protein-dependent transport systems inner membrane component [Chelativorans sp. BNC1] Length = 210 Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 26/178 (14%) Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 ++ VV + IA II + VGIW+ RP S I +L A P+ F L++ + Sbjct: 19 LYLVVSSVGIALIISLVVGIWVARRPKAFSAIIMVTGVLFAIPSLALFALLIPLMGIGTG 78 Query: 447 NPNLWLSL--LMIFGTQWYILFNVIAGASAFPNDFKEVASSF-HITGWRWWRYIILPGIF 503 LS LMI ++ N+ G + P D E A + T R W + LP Sbjct: 79 PAITGLSAYSLMI------LIRNIAVGFQSIPADVLEAAHGMGYGTPRRLWE-VELPLAM 131 Query: 504 PYYVTG----AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 P+ V G +T G ++ VA++ + GLGA I E ++ FPE ++ Sbjct: 132 PFIVAGIRIATVTVVG-------IATVAAY----INAGGLGAIIFEGIDQ-RFPEKII 177 >gi|126732156|ref|ZP_01747958.1| putative glycine betaine transport system permease abc transporter protein [Sagittula stellata E-37] gi|126707445|gb|EBA06509.1| putative glycine betaine transport system permease abc transporter protein [Sagittula stellata E-37] Length = 277 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 14/144 (9%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + T +++A V+ + AA+ L L P+LD+MQ+IP +L ++ Sbjct: 91 EETTETLALVIAAAVVCMGVGVPVGIAAARRPWLYNALSPVLDLMQTIPTFVYLIPALIL 150 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + + PG + IFAI +T + + + P L E +F + Q + Sbjct: 151 FGLGMVPGLIA----TVIFAI--PAPIRLT---HLGITSTPTALIEAGEAFGATRRQLLY 201 Query: 182 YLGVPFSMP----GLVWNMMMSMS 201 + +P++MP GL +M+S+S Sbjct: 202 KVELPYAMPQIMAGLTQTIMLSLS 225 >gi|328476073|gb|EGF46783.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus rhamnosus MTCC 5462] Length = 221 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+ R L ++ I +++Q+IP L L+ ++ G +G I +F + + Sbjct: 51 ARHRTLSNTVIGIANVIQTIPSLAMLSIIML-------GLGLGVN-TVIVTVFLYSLLPI 102 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + Y + N+ ++L + ++ ++ WQ + + +P SM Sbjct: 103 IKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSM 141 >gi|310779189|ref|YP_003967522.1| molybdate ABC transporter, inner membrane subunit [Ilyobacter polytropus DSM 2926] gi|309748512|gb|ADO83174.1| molybdate ABC transporter, inner membrane subunit [Ilyobacter polytropus DSM 2926] Length = 220 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 14/147 (9%) Query: 130 KVIGAEL-----AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 KV G L AA A F + M S + NI LE+ +R+ + FW +G Sbjct: 77 KVFGTSLIFTWKAACVASFVVSLPLMYQSCKAAFINIDSSLEKAARTLGADEKRIFWKIG 136 Query: 185 VPFSMPGLVWNMMMSMSG--GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 +P + PG++ ++S + G F + ++V G+ +PG I +AI Sbjct: 137 IPMAAPGIISGTILSFTRALGEF---GATLMVAGN----IPGKTQTIPIAIYFAVDSGDR 189 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNK 269 ++G++ ++ L+ + +W+ K Sbjct: 190 RTANILVGIVVIFSFLVIYGLNIWNRK 216 >gi|239932299|ref|ZP_04689252.1| glycine betaine transport system permease protein [Streptomyces ghanaensis ATCC 14672] gi|291440664|ref|ZP_06580054.1| glycine betaine transport system permease protein [Streptomyces ghanaensis ATCC 14672] gi|291343559|gb|EFE70515.1| glycine betaine transport system permease protein [Streptomyces ghanaensis ATCC 14672] Length = 872 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 4/139 (2%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 F + D L + +T+ V+V +IA +I +PVGIW +S+ ++P + PA Sbjct: 75 FAFLDSLELWEDSMVTLALVIVATVIALVISVPVGIWAARSDRVSAMVRPVLDFMQTLPA 134 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 ++ + + ++ P + +IF + + G + E A +F T Sbjct: 135 MIYL---IPAILFFGTGPAPGIVATLIFALAPGVRMTEL-GIRQVDKELVEAAEAFGTTP 190 Query: 491 WRWWRYIILPGIFPYYVTG 509 + LP P + G Sbjct: 191 RNTLLRVQLPLALPTVMAG 209 >gi|27378302|ref|NP_769831.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351449|dbj|BAC48456.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 301 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 14/174 (8%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+ + +A+I+ +P+G+ +G + I P A++L PA + P+ + L P Sbjct: 114 RIFIGFSLAAIVGVPLGLIMGRFKLVHEIIFPVAEVLRPIPAIAWVPMAI------MLWP 167 Query: 449 NLWLSLLMI--FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 S++ I G+ + IL N + G S A +R + P P+ Sbjct: 168 TNEQSIVFITFLGSFFPILVNTLHGMSLVDPVLVRAAQCLGARERSIFREVYFPASLPHI 227 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 TG G AW + I +E+ S + G+G + E+ + ++ LG++ Sbjct: 228 FTGLTVGMGVAWVSLIAAEMISGQY------GIGYFTWEAYSLVQYADIALGMI 275 >gi|225686270|ref|YP_002734242.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis ATCC 23457] gi|256043365|ref|ZP_05446298.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis bv. 1 str. Rev.1] gi|256111625|ref|ZP_05452620.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis bv. 3 str. Ether] gi|256262594|ref|ZP_05465126.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|260564570|ref|ZP_05835055.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|225642375|gb|ACO02288.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis ATCC 23457] gi|260152213|gb|EEW87306.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|263092380|gb|EEZ16633.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|326410629|gb|ADZ67693.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis M28] gi|326553921|gb|ADZ88560.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis M5-90] Length = 272 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252 G G+GSYI A DL + A+L+++G+I Sbjct: 221 GAQY----GVGSYILEARSLYDLEKLFAGVAILSVMGLI 255 >gi|218549545|ref|YP_002383336.1| ABC transporter permease [Escherichia fergusonii ATCC 35469] gi|218357086|emb|CAQ89719.1| putative transporter subunit: permease component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 385 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ L+G Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGLNGAQRFLHVQLPLALP 310 >gi|254436896|ref|ZP_05050390.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198252342|gb|EDY76656.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 310 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Query: 111 PILGFLTFTVVYFMNLYPGK--VIGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRD 164 P +G + V +F P +IG A +AI + W T F M L +IP Sbjct: 145 PQIGLFNYAVTFFTGGDPASFSMIGDVHLAPWAIVIADTWMWTPFVMLICLAGLRSIPDS 204 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + E + R S W++FW + +P ++P L+ Sbjct: 205 IYEAAECDRASKWRQFWTITIPMALPFLM 233 >gi|182440129|ref|YP_001827848.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468645|dbj|BAG23165.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 275 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 31/71 (43%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ G +++ NV AG E S + W R+++LPG P +TG + Sbjct: 146 LIALGVAFHLYLNVYAGIRGVDAQLIEAGESLGLGRWGLVRHVVLPGALPGAMTGLRYSL 205 Query: 515 GGAWNASIVSE 525 AW A + E Sbjct: 206 ATAWLALVFGE 216 >gi|71083984|ref|YP_266704.1| glycine betaine/L-proline transport system permease [Candidatus Pelagibacter ubique HTCC1062] gi|71063097|gb|AAZ22100.1| glycine betaine/L-proline transport system permease [Candidatus Pelagibacter ubique HTCC1062] Length = 717 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L A +S LF + +A KS+R+ L PIL +MQ++P L +V F Sbjct: 207 ILVAAPLSFLFGLTFGVMAFKSKRVEKFLYPILLVMQTMPQYAVLVPAIVLFG------- 259 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 IG A I + + V M L IP ++ E R + WQ Sbjct: 260 IGDHAAVIITMVVA-VPPMILLTLLGLRGIPSEVIEAGRMSGCNNWQ 305 >gi|317054032|ref|YP_004118057.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] gi|316952027|gb|ADU71501.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 245 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%) Query: 73 LSAMVISLLFT----FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L+ +V++LL V A L A S + +L P++ Q+IP+ V++ Sbjct: 57 LAEIVLALLLGVGAGIVLAVLMAGSPTVRRLLFPLVTASQAIPVFALAPLLVLWLGFGIA 116 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 KV+ A L F + S++ LC P E++++ S + FW + P + Sbjct: 117 SKVVVAALILFF--------PLCLSLFDGLCRTPPGWIELAQTLNASRLRLFWQVRWPAA 168 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 +P + M++ V+A +V+G+ V G+G Sbjct: 169 LPQFFSGLQMAV------VLAPIGVVIGEWVGASEGLG 200 >gi|90414042|ref|ZP_01222026.1| putative ABC transporter permease protein [Photobacterium profundum 3TCK] gi|90324964|gb|EAS41485.1| putative ABC transporter permease protein [Photobacterium profundum 3TCK] Length = 273 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 19/174 (10%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+PIL Q+IP+ +++ K++ A L F + T Y L Sbjct: 114 LLPILIASQAIPVFAIAPILMLWLGYGIASKIVMAALIIFFPV--------TTCCYDGLR 165 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 + P +++++ S WQ ++ +P ++P L + +++ VVA VVG+ V Sbjct: 166 HTPTGYLDLAKTMGASKWQLLRHVRLPAALPALASGIRVAV------VVAPIGAVVGEWV 219 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLG----VIFLYDQLLFRPMIVWSNK 269 G+G Y+ L + ++ ++A L +L ++ LL + I W +K Sbjct: 220 GSSEGLG-YLMLQANARMMIDEMFAALLILATFSITLYFAADLLLKRAIPWQSK 272 >gi|307823541|ref|ZP_07653770.1| binding-protein-dependent transport systems inner membrane component [Methylobacter tundripaludum SV96] gi|307735526|gb|EFO06374.1| binding-protein-dependent transport systems inner membrane component [Methylobacter tundripaludum SV96] Length = 248 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 23/193 (11%) Query: 361 WQSIGYIVNHFTY---QDVLYVIWLGCI----------TMFRVVVLIIIASIIWIPVGIW 407 WQ + +N T + V V WLGC+ T+ R+VV +A ++ +GI Sbjct: 20 WQGVAVYLNSNTLPTPEAVAKVFWLGCVSGQLPFHLGVTLLRLVVSFSVAMLLGCAIGIV 79 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 +G + + + + PA V ++ C ++ L + + L ++ ++ Sbjct: 80 LGRNKKLDAFFDNWLVIFLNIPALV---TIILCYVWFGLVESAAI-LAVVINKLPNVIVT 135 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G A D ++A +H + ++I P + P+ + + W +V E+ Sbjct: 136 IREGTRALDQDLLDMARCYHFGKRKTLIHVIWPQLHPFVMGATRSGLALIWKIILVVELL 195 Query: 528 SWGHIHLRTTGLG 540 R+ G+G Sbjct: 196 G------RSNGMG 202 >gi|317047816|ref|YP_004115464.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316949433|gb|ADU68908.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 254 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 9/185 (4%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T++R ++ ++A++I +P+G+ +G + ++ + P++ PL + Sbjct: 62 TLYRTLMAFVVAAVIGVPLGVMLGSSERLYRSVEFLVDFFRSTPSSALIPLFMLIFGITD 121 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N + F ILFN G A ++ W ++ I+L P Sbjct: 122 TNK----IAIAAFAAVLVILFNSAYGVMNARKTRIMAAQVMGVSRWHVFKDIMLMESLPQ 177 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G T A IV+E+ TGLG I ++ + + ++ +LI F Sbjct: 178 TFVGLRTGVSMALVIVIVAEMFIGSE-----TGLGHRIIDAQQLFNIKDMYASILITGAF 232 Query: 566 VLALN 570 LN Sbjct: 233 GYLLN 237 >gi|163747109|ref|ZP_02154465.1| glycine betaine/proline ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161379670|gb|EDQ04083.1| glycine betaine/proline ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 341 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 31/141 (21%), Positives = 73/141 (51%), Gaps = 14/141 (9%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+S R+ ++P+LD++Q++P +L +++ ++ K+ G + + ++ ++ Sbjct: 175 ARSDRVQRSMIPVLDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAIILYAIVPVVRLTDL 233 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + + +D+ E + +F ++ QK + + +P ++P G+ +MMS++ Sbjct: 234 GIRL------VDQDVIEAADAFGMTNRQKLFKVQIPLALPNIMAGVNQTIMMSLA---MV 284 Query: 207 VVASEMIVVGDTVIPLPGIGS 227 V+AS + G V+ L GI S Sbjct: 285 VIASLVSAPGLGVLVLRGIRS 305 >gi|146341312|ref|YP_001206360.1| putative sugar ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194118|emb|CAL78137.1| putative sugar ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 351 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 25/41 (60%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 F + Q + +P+DL E +R + S WQ +W + +P ++P L Sbjct: 231 FLLRQYMLTLPKDLIEAARMDKASEWQIYWRIVMPLTLPAL 271 >gi|53719435|ref|YP_108421.1| hypothetical protein BPSL1822 [Burkholderia pseudomallei K96243] gi|52209849|emb|CAH35821.1| putative membrane protein [Burkholderia pseudomallei K96243] Length = 323 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 151 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 202 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 203 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 262 >gi|317127058|ref|YP_004093340.1| binding-protein-dependent transporters inner membrane component [Bacillus cellulosilyticus DSM 2522] gi|315472006|gb|ADU28609.1| binding-protein-dependent transport systems inner membrane component [Bacillus cellulosilyticus DSM 2522] Length = 300 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 20/138 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGK 130 +L+A ++S++ L AK+ ++ P+LD MQ++P +L V +F + + PG Sbjct: 120 VLNASILSVIIGVPIGILMAKNNTAEAIIKPVLDFMQTMPAFVYLLPAVAFFSIGMVPG- 178 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 +F S V+ ++ + + ++L E + +F +G QK + + +P Sbjct: 179 -----------VFASLVFATPPTIRFTNLGIRQVSKELVEAADAFGSTGSQKLFKVELPM 227 Query: 188 S----MPGLVWNMMMSMS 201 + M G+ +M+++S Sbjct: 228 ARATIMAGINQTVMLALS 245 >gi|269792013|ref|YP_003316917.1| binding-protein-dependent transport systems inner membrane component [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099648|gb|ACZ18635.1| binding-protein-dependent transport systems inner membrane component [Thermanaerovibrio acidaminovorans DSM 6589] Length = 278 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 77/173 (44%), Gaps = 13/173 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + ++S + +P GI +G RP + I P + + L+ + ++ Sbjct: 83 SLTRIGMGFTMSSAVALPAGILMGLRPRLRRAISPLLEFMRHV---PPLALLPLLILWFG 139 Query: 446 LNPNLWLSLLMIFGTQWYILF-NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L+++ + ++ F N + G EV +F ++ I+LP P Sbjct: 140 IGEGSKLAVIAL--ASFFPAFINAMEGVMGCDRSLVEVGHAFGLSEREIIGRIVLPYSLP 197 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 Y + G A G +W + I +E+ + ++GLG Y+ + + S P+V L Sbjct: 198 YVLAGLRLALGYSWRSLIGAELLA------ASSGLG-YMIQDAQAMSRPDVAL 243 >gi|256393443|ref|YP_003115007.1| sulfate ABC transporter permease [Catenulispora acidiphila DSM 44928] gi|256359669|gb|ACU73166.1| binding-protein-dependent transport systems inner membrane component [Catenulispora acidiphila DSM 44928] Length = 441 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 36/233 (15%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G AW S+G+ V H G I V I P+G+ +G + + Sbjct: 236 GDAWPSVGHSVEH------------GAIGFGASVA-------IGTPLGLLVGRVRAVRAG 276 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P L + P+ + P + ++ P + L +++ G I V++G P Sbjct: 277 LGPILSGLQSLPSVAWVP---PALMFFGPKPAM-LYAVVLAGAVPSISVGVVSGLDQVPP 332 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN----ASIVSEVASWGHIH 533 + V + G RY++LP P Y+ G +W A I+ E A GH Sbjct: 333 LYLRVGRNLGARGLASVRYVLLPAALPGYLAGLRQGWAFSWRSLLAAEIIVESADLGH-- 390 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 LG + + + ++++ +A+N+ ++ PL R LR Sbjct: 391 ----SLGFLLKNAQDSNDMAGAFAAIVLILAVGVAVNQLVFVPLE---RRVLR 436 >gi|213691368|ref|YP_002321954.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522829|gb|ACJ51576.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457440|dbj|BAJ68061.1| sugar ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 289 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R+ MV V + + I F F +N Y G + LA I + +WNM Sbjct: 116 RGRKAIMVFVLAIQMTSGGIIPQFFIFNQFGLLNKYSGLI----LAYIAMVLPFAIWNM- 170 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 NIP+D+ E + + WQ W + P + PG+V + + W Sbjct: 171 ---RGFFLNIPKDIFESAAVEGANDWQILWKITFPLAAPGIVSTSVFAFISAW 220 >gi|167719687|ref|ZP_02402923.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98] Length = 270 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 98 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 149 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 150 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 209 >gi|330466133|ref|YP_004403876.1| putative ABC transporter [Verrucosispora maris AB-18-032] gi|328809104|gb|AEB43276.1| putative ABC transporter [Verrucosispora maris AB-18-032] Length = 282 Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 ++++ G W IL N I G A + E A SF +T W +++LP P + G Sbjct: 149 VVIVSGAVWPILLNTIEGVRATDSVMTETADSFQVTWWERLWFLVLPAASPRIMAGVRQG 208 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 A ++SE + + GLG IA Sbjct: 209 LSVALILMVISE------MFASSAGLGYRIA 233 >gi|296394034|ref|YP_003658918.1| binding-protein-dependent transporter inner membrane component [Segniliparus rotundus DSM 44985] gi|296181181|gb|ADG98087.1| binding-protein-dependent transport systems inner membrane component [Segniliparus rotundus DSM 44985] Length = 291 Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R ++A + +P+G+ I + P ++ P +L P+ V + Sbjct: 100 SLLRAGAGFVLAVLAGVPLGLAIAWFPRVADSANPVLELFRNTAPLALLPVFVLVLGIGE 159 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++LL G + ++ N IAGA + + A S + + ++LPG P Sbjct: 160 TS---KITLLFYSGI-FPVVLNTIAGARSADPLLVKAARSLGFGHMQTFVKVVLPGAVPA 215 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A AS V + + I R GLG I + + P++ +G+L + Sbjct: 216 VFTGVRQAA-----ASCVLVLVAAEMIGARA-GLGYLITAAQSSFAIPDMYVGILTIALV 269 Query: 566 VLALNRFL 573 L LN L Sbjct: 270 GLTLNAVL 277 >gi|260663065|ref|ZP_05863958.1| phosphate ABC transporter, permease PstC [Lactobacillus fermentum 28-3-CHN] gi|260552686|gb|EEX25686.1| phosphate ABC transporter, permease PstC [Lactobacillus fermentum 28-3-CHN] Length = 311 Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 83/170 (48%), Gaps = 8/170 (4%) Query: 58 VHSLPQYASRTTLRMLSAMVIS--LLFTFVYATLAAKSRRLGMVLVPILDIMQSIP--IL 113 V +LP + ++ +L+A+V + L ++ T A R G++ +++++ IP + Sbjct: 84 VGALPMIVTSFSVTLLAAVVATPFALAIALFTTELAPKRSRGLIQ-SMVELLVGIPSVVY 142 Query: 114 GFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRS 171 GF+ V+ NL+ G G L A +F + +T +SL ++PRD S + Sbjct: 143 GFIGLAVLVPVIRNLFGGTGSGI-LTATLVLFVMILPTITSLTIESLRSVPRDYRSASFA 201 Query: 172 FRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + WQ + + ++PG++ ++ M+ + +A +M++ V+P Sbjct: 202 LGATMWQTMHRVILRAALPGILTAVIFGMARAFGEALAVQMVIGNAAVMP 251 >gi|89056438|ref|YP_511889.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] gi|88865987|gb|ABD56864.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] Length = 430 Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 4/134 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++ +++ IP+G +G P + + P PLV+ Sbjct: 239 SLFRVVVGFVLGALVGIPLGYAMGLSNWARGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 298 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + AG S A S + + R++I+P P Sbjct: 299 AGK----IVLLFLAALWIMAIAARAGVSGVNISKVHAAYSLGASKAQIMRHVIVPNSLPE 354 Query: 506 YVTGAITACGGAWN 519 TGA A G W Sbjct: 355 IFTGARVAMGVCWG 368 >gi|126441809|ref|YP_001058904.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126221302|gb|ABN84808.1| nitrate/sulfonate/taurine ABC transporter, permease protein [Burkholderia pseudomallei 668] Length = 323 Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 151 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 202 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 203 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 262 >gi|331002262|ref|ZP_08325781.1| hypothetical protein HMPREF0491_00643 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411356|gb|EGG90772.1| hypothetical protein HMPREF0491_00643 [Lachnospiraceae oral taxon 107 str. F0167] Length = 297 Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%) Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 +FG Y + IAG P D+ E AS ITG++ +R+II P Sbjct: 167 VFGNVGYFMMMFIAGIEKIPQDYFEAASLEGITGFQRFRHIIFP 210 >gi|306827362|ref|ZP_07460649.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] gi|304430509|gb|EFM33531.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] Length = 508 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 25/185 (13%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 +++I+LL A L ++S+R +++ + + Q+IP L L + P IG Sbjct: 29 SLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI-------PLMGIGT 81 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 L A+ A+ ++ + + L I L E +F ++ W++ +P +MP + Sbjct: 82 -LPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI-- 138 Query: 195 NMMMSMSGGWFFVVASEMIVVGD----TVIPLPGIGSYIALAIKEQDLLAILYAMLT--M 248 MSG V S ++++G ++I G+GS+I L I + IL ++ + Sbjct: 139 -----MSG----VRTSAVMIIGTATLASLIGAGGLGSFILLGIDRNNANLILIGAISSAL 189 Query: 249 LGVIF 253 L +IF Sbjct: 190 LAIIF 194 >gi|296102564|ref|YP_003612710.1| putative osmoprotectant transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057023|gb|ADF61761.1| putative osmoprotectant transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 236 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 15/109 (13%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNM 150 +R + ++ I ++ ++P L L +V VIG + AI A+F + + + Sbjct: 71 AARGVAEYVMQIFNVGNTLPPLAVLALAMV---------VIGIGDTPAIIALFLASLLPI 121 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 + Y LC++P L E + ++ WQ+ + +P + W +M+S Sbjct: 122 VRNTYAGLCSVPSSLLEAANGIGMTKWQRLRQVELPNA-----WPVMLS 165 >gi|291612563|ref|YP_003522720.1| binding-protein-dependent transport systems inner membrane component [Sideroxydans lithotrophicus ES-1] gi|291582675|gb|ADE10333.1| binding-protein-dependent transport systems inner membrane component [Sideroxydans lithotrophicus ES-1] Length = 325 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 4/132 (3%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+SII +P+GI G ++ +PF + PA F L V+ + Y P + Sbjct: 140 VISSIIGVPLGILSGTYSTMARLNEPFIEFFRYLPAPAFGALAVAVLGIYD-APKI---S 195 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 +++ GT + + V E A + R +++PGI P Sbjct: 196 IIVIGTLFQQILIVANTTRKLDPTIVEAALTLGTNRLRMLTRVVVPGILPDLYRDQRILL 255 Query: 515 GGAWNASIVSEV 526 G AW IV+E+ Sbjct: 256 GWAWTYLIVAEL 267 >gi|326386847|ref|ZP_08208462.1| taurine ABC transporter, permease protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208650|gb|EGD59452.1| taurine ABC transporter, permease protein [Novosphingobium nitrogenifigens DSM 19370] Length = 259 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 8/154 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+A+ + R+ AM+ +++ R+ L P+++ + +P L +L Sbjct: 60 SLWQHAAASLARVGLAMLFAVITAIPAGMAMGLFPRVNAALDPLIEFYRPVPPLAYLPLI 119 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++F IG E+ + I+ + + + + + D +RS S Q Sbjct: 120 VIWFG-------IG-EVTKVILIYMAIFAPLAIATASGVRRVDPDRIRAARSLGASRDQI 171 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 W + P ++P ++ + +++ GW +VA+E++ Sbjct: 172 AWLVVFPSALPDILTGLRIALGVGWSTLVAAELV 205 Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust. Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 11/203 (5%) Query: 362 QSIGYIVNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 Q +G +V+ + V +W ++ RV + ++ A I IP G+ +G P +++ + P Sbjct: 43 QILGRVVDLARHGFVGASLWQHAAASLARVGLAMLFAVITAIPAGMAMGLFPRVNAALDP 102 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P + PL+V + + L + IF + +G D Sbjct: 103 LIEFYRPVPPLAYLPLIVIWFGIGEVT-KVILIYMAIFAP---LAIATASGVRRVDPDRI 158 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 A S + + ++ P P +TG A G W+ + +E+ + T GLG Sbjct: 159 RAARSLGASRDQIAWLVVFPSALPDILTGLRIALGVGWSTLVAAELVA------ATRGLG 212 Query: 541 AYIAESTEKGSFPEVVLGVLIMC 563 + +++ VV G+L++ Sbjct: 213 FMVQSASQMLVTDVVVAGILVIA 235 >gi|310828331|ref|YP_003960688.1| hypothetical protein ELI_2744 [Eubacterium limosum KIST612] gi|308740065|gb|ADO37725.1| hypothetical protein ELI_2744 [Eubacterium limosum KIST612] Length = 260 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 NV+ G + E+A+ +H+ R + I LP + PY+ + + G W +++ SEV Sbjct: 144 NVVEGIQNTSRNLLEMAALYHVPFKRVLKDIYLPTLKPYFASALMNVIGMGWRSTVTSEV 203 Query: 527 ASWGHIHLRTTGLGAYIAE 545 + L + G+ Y A+ Sbjct: 204 LA---NALPSVGMNLYYAK 219 >gi|304389468|ref|ZP_07371431.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656714|ref|ZP_07909601.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327278|gb|EFL94513.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492669|gb|EFU82273.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 269 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 11/175 (6%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++ I+ +P+ I +++ +QPF A PA PL++ + P L +++ Sbjct: 88 VLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLL----IWLPTPRLAIAM 143 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L + IL + G E A W RY+ +P + P + G Sbjct: 144 LCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSLLGGIRNGV 203 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 + ++V E+ GH G+G I + P + + LIM C V AL Sbjct: 204 TLSITGAVVGEMVIGGH------GMGTLITLQSHNVDTPGMFVS-LIMICTVAAL 251 >gi|266624053|ref|ZP_06116988.1| taurine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288864120|gb|EFC96418.1| taurine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 242 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 10/115 (8%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA-ELAAIFAIFTSQVWNMTFSMYQS 157 +L P++ +++IP + ++ +V +G E + I IF + M ++YQ Sbjct: 93 LLEPVVQFIRTIPPIAYIPLVIV---------ALGVDESSKIMVIFIATFLVMVITIYQG 143 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + N+ L + +R + F+++ VP S P ++ + + +S G ++ASE+ Sbjct: 144 VKNVDSTLVKAARVLGANDRDIFFHVVVPASFPFVLTAIRLGLSAGLTTLIASEL 198 >gi|269957314|ref|YP_003327103.1| binding-protein-dependent transport systems inner membrane component [Xylanimonas cellulosilytica DSM 15894] gi|269305995|gb|ACZ31545.1| binding-protein-dependent transport systems inner membrane component [Xylanimonas cellulosilytica DSM 15894] Length = 289 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%) Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L +LSA I+L+ AA++ R+ L P+LD MQ++P +L TVV F+ Sbjct: 97 ALVLLSA-AIALILAVPLGIWAARNERVSQTLRPVLDFMQTMPGFVYLIPTVVIFLT--- 152 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G V G IFA+ + F+ + + +++ E +F + + + +P + Sbjct: 153 GPVPGIIATIIFAMAP----GVRFTEL-GIRQVDKEVVEAGHAFGATPGRILRQIQLPLA 207 Query: 189 MP----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P G+ +M+S+S VV + M+ G G+G+ + A++ D+ Sbjct: 208 LPTVMAGVNQVIMLSLS----MVVIAGMVGAG-------GLGNDVVAALQRVDV 250 >gi|330807505|ref|YP_004351967.1| amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375613|gb|AEA66963.1| Putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 217 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 13/201 (6%) Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 +H + VL++ W IT+ + V +A ++ +P+GI++ P ++ +Q A +L Sbjct: 8 SHLDWPLVLHLTW-QHITLVGIAV--TLAIVVGVPLGIFMTRFPALAGPLQASATVLLTI 64 Query: 429 PANVFFPLVVSCVSYY--HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P+ F L++ S + L P ++ + ++ + I+ N + +E A Sbjct: 65 PSIALFGLLLPFYSKFGQGLGPMPAITAVFLY-SLLPIMRNTYLALTGVEPGIREAARGI 123 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 +T + R + LP P + G TA N +++ A+ G GLG I S Sbjct: 124 GMTFGQRLRMVELPIAVPVILAGVRTAV--VMNIGVMTIAATIG-----AGGLGVLILAS 176 Query: 547 TEKGSFPEVVLGVLIMCCFVL 567 + +++G +++ + Sbjct: 177 ISRSDMSMLIVGAVLVSLLAI 197 >gi|315655372|ref|ZP_07908272.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315490312|gb|EFU79937.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 267 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 11/175 (6%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++ I+ +P+ I +++ +QPF A PA PL++ + P L +++ Sbjct: 86 VLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLL----IWLPTPRLAIAM 141 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L + IL + G E A W RY+ +P + P + G Sbjct: 142 LCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSLLGGIRNGV 201 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 + ++V E+ GH G+G I + P + + LIM C V AL Sbjct: 202 TLSITGAVVGEMVIGGH------GMGTLITLQSHNVDTPGMFVS-LIMICTVAAL 249 >gi|332669862|ref|YP_004452870.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas fimi ATCC 484] gi|332338900|gb|AEE45483.1| binding-protein-dependent transport systems inner membrane component [Cellulomonas fimi ATCC 484] Length = 313 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 FS+Y L +P + E ++ SGWQ+FW + +P P Sbjct: 197 FSVYAGLLQVPEETMEAAQLDGASGWQRFWGITIPMMRP 235 >gi|304395788|ref|ZP_07377671.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] gi|304357082|gb|EFM21446.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] Length = 391 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 28/227 (12%) Query: 57 DVHSLPQYASRTTL------RMLSAMVISLLFTFVYA-----TLAAKSRRLGMVLVPILD 105 D+ L +YA+R + R L+ +V ++L ++A TL + G V +L+ Sbjct: 166 DLSLLKEYANRHAVFDAALSRHLTLLVGTILPALMFALPLGVTLFRRPDWQGSVF-GVLN 224 Query: 106 IMQSIP---ILGFLTFTVVYFMNLYPG----KVIGAELA-AIFAIFTSQVWNMTFSMYQS 157 ++Q++P + G L + +P + G +A A+ A+ + + S+ Sbjct: 225 VIQTVPSVALFGLLIAPLAGLAQHFPWLSDWGISGIGMAPALIALVLYALLPLVRSVVVG 284 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P+++ E +R +SGWQ+F + VP ++P VW ++G VV + + V Sbjct: 285 LQQVPQEVRESARGTGMSGWQQFVAVDVPLALP--VW-----LAGLRVVVVQTLGMAVVA 337 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 +I G G+ I + L +L ++ ++ + + D LFR +I Sbjct: 338 ALIGAGGFGAIIFQGLLSSALDLVLLGVIPVIALAVVIDA-LFRLLI 383 >gi|254471300|ref|ZP_05084702.1| abcb protein [Pseudovibrio sp. JE062] gi|211959446|gb|EEA94644.1| abcb protein [Pseudovibrio sp. JE062] Length = 256 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 15/163 (9%) Query: 56 LDVHSLP---QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 +D+ +LP +Y T R + +++ F + +A S L ++ P + + +P Sbjct: 49 IDLVALPSGFEYILITAKRAFAGFLLASAFGISFGLIAGWSNTLSLLCKPFITVALGVPP 108 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 + ++ +++F G + IF +F S + + Q + ++L+E+++SF Sbjct: 109 IAWIVLALLWFG--------GDDGTPIFTVFISTLPLIFAGALQGVRMREKELDEMAQSF 160 Query: 173 RLSGWQKFWYLGVPFSMPGL--VWNMMMSMSGGWFFVVASEMI 213 + Q+FW + P + L W + +S W VV +E++ Sbjct: 161 HVPLIQRFWQVQAPQIVSYLFPAWATALGLS--WKVVVMAELL 201 >gi|209884786|ref|YP_002288643.1| taurine transport system permease protein TauC [Oligotropha carboxidovorans OM5] gi|209872982|gb|ACI92778.1| taurine transport system permease protein TauC [Oligotropha carboxidovorans OM5] Length = 286 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++I++ IP L ++ ++++ + + L + F I + + + N+ Sbjct: 126 PIVEILRPIPPLAWIPLSIIWLGVGFKSVLFITTLGSFFPILVATI--------AGVRNV 177 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 R + E +R+ S Q + +P +MP M +++ W VVA+EMI V Sbjct: 178 DRRMIEFARTLGASTGQILLKVVIPAAMPQTFVGMRIAVGFSWMVVVAAEMISV 231 >gi|54302366|ref|YP_132359.1| putative ABC transporter permease protein [Photobacterium profundum SS9] gi|46915788|emb|CAG22559.1| putative ABC transporter permease protein [Photobacterium profundum SS9] Length = 292 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 19/174 (10%) Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L+PIL Q+IP+ +++ K++ A L F + T Y L Sbjct: 133 LLPILIASQAIPVFAIAPILMLWLGYGIASKIVMAALIIFFPV--------TTCCYDGLR 184 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 + P +++++ S WQ ++ +P ++P L + +++ VVA VVG+ V Sbjct: 185 HTPTGYLDLAKTMGASKWQLLRHVRLPAALPALASGIRVAV------VVAPIGAVVGEWV 238 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLG----VIFLYDQLLFRPMIVWSNK 269 G+G Y+ L + ++ ++A L +L ++ LL + I W +K Sbjct: 239 GSSEGLG-YLMLQANARMMIDEMFAALLILATFSITLYFAADLLLKRAIPWQSK 291 >gi|220933131|ref|YP_002510039.1| binding-protein-dependent transport systems inner membrane component [Halothermothrix orenii H 168] gi|219994441|gb|ACL71044.1| binding-protein-dependent transport systems inner membrane component [Halothermothrix orenii H 168] Length = 286 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 132 IGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 +G AI+AI + +W T F+M +L I R+L E +R + WQ+FWY+ +P Sbjct: 146 LGNPDIAIWAIVITNIWFGTPFTMLFLGSALNTISRELYEAARVDGATRWQQFWYVTIPA 205 Query: 188 SMPGLVWNMMM 198 P + N+++ Sbjct: 206 LKPFIATNLIL 216 >gi|149203355|ref|ZP_01880325.1| probable sugar ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149143188|gb|EDM31227.1| probable sugar ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 315 Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Query: 111 PILGFLTFTVVYFMNLYPGK--VIGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRD 164 P +G + V +F P +IG A +AI + W T F M L +IP Sbjct: 150 PQIGLFNYVVAFFTGADPASFSMIGDVNLAPWAIIIADTWMWTPFVMLICLAGLRSIPDS 209 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + E + R S W++FW + +P ++P L+ Sbjct: 210 IYEAAECDRASKWRQFWTITLPMALPFLM 238 >gi|327478891|gb|AEA82201.1| ABC-type transporter membrane permease component [Pseudomonas stutzeri DSM 4166] Length = 261 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G A Sbjct: 128 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFAL 187 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF-------VL 567 G W IV+E S + G+G + E VVL +L+ Sbjct: 188 GFMWLTLIVAETIS------ASAGIGYLAMNAREFLQTDVVVLAILLYALLGKLADVAAR 241 Query: 568 ALNR--FLWHPLY 578 L R WHP Y Sbjct: 242 GLERVWLRWHPAY 254 >gi|313901679|ref|ZP_07835111.1| binding-protein-dependent transport systems inner membrane component [Thermaerobacter subterraneus DSM 13965] gi|313468056|gb|EFR63538.1| binding-protein-dependent transport systems inner membrane component [Thermaerobacter subterraneus DSM 13965] Length = 296 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + A +T +L+A VI++ A++S L VL P+LD+MQ++P L V++ Sbjct: 90 EPAMQTLALVLAATVIAVGVGIPLGIAASRSAMLRAVLRPVLDLMQTLPAFVHLLPAVLF 149 Query: 123 F-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F + PG + A AI + + + +P D+ E R+F + Q Sbjct: 150 FGAGVVPGLLATVVFAVPPAIRLTDL---------GIRQVPADVVEAGRAFGSTPNQILR 200 Query: 182 YLGVPFSMP 190 + +P ++P Sbjct: 201 KIQLPLALP 209 >gi|189463174|ref|ZP_03011959.1| hypothetical protein BACCOP_03885 [Bacteroides coprocola DSM 17136] gi|189430153|gb|EDU99137.1| hypothetical protein BACCOP_03885 [Bacteroides coprocola DSM 17136] Length = 266 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A IF + + + M + +Y +L + R E ++ + +Q FW + P SMPG+V Sbjct: 131 GEGALIFGMIYNFIPFMIYPIYNTLQKMDRSYIEAAQDLGANSFQVFWKVIFPLSMPGVV 190 Query: 194 WNMMM 198 +MM Sbjct: 191 SGIMM 195 >gi|146282371|ref|YP_001172524.1| ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145570576|gb|ABP79682.1| ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 271 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 8/155 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + + R+ S + I+ + A G L P+L ++ +P L L + Sbjct: 73 QDTASSLKRLGSGLAIAAVAGLCLGVAAGTLPLFGAPLSPLLTVLSMVPPLAILPILFIV 132 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F EL+ + I + + Q IPR+L +++ + W Sbjct: 133 FGL--------GELSKVMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWTLILR 184 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P +P L+ ++ + + W F++A+E I D Sbjct: 185 LVLPQLLPRLLISLRLVLGSAWLFLIAAEAIASTD 219 >gi|134282421|ref|ZP_01769126.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|134246459|gb|EBA46548.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] Length = 313 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 141 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 192 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 193 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 252 >gi|254179876|ref|ZP_04886475.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|184210416|gb|EDU07459.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 313 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 141 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 192 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 193 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 252 >gi|329907288|ref|ZP_08274605.1| L-proline glycine betaine ABC transport system permease protein ProW [Oxalobacteraceae bacterium IMCC9480] gi|327547038|gb|EGF31925.1| L-proline glycine betaine ABC transport system permease protein ProW [Oxalobacteraceae bacterium IMCC9480] Length = 412 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 28/188 (14%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+++ L+ L A S R + P+LD MQ+ P +L V+ F G V Sbjct: 183 VLTSLAFCLVIGLPLGVLLASSDRAQRLTRPLLDAMQTTPAFVYLVPVVMLFGI---GNV 239 Query: 132 IGAELAAIFAIFT-SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G + +FA+ ++ N+ + DL E +R++ S Q + + +P ++P Sbjct: 240 PGVIVTIVFALPPLVRLTNLGIRQVRP------DLIEAARAYGASPAQMLFKVQLPLALP 293 Query: 191 ----GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 G+ +M+S+S VV + MI VG G+G + I D+ A + Sbjct: 294 SIMAGVNQTLMLSLS----MVVIASMIAVG-------GLGQMVLRGIGRLDM---GLATV 339 Query: 247 TMLGVIFL 254 LG++ L Sbjct: 340 GGLGIVLL 347 >gi|323127201|gb|ADX24498.1| glycine betaine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 508 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 25/185 (13%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 +++I+LL A L ++S+R +++ + + Q+IP L L + P IG Sbjct: 29 SLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLALLGLFI-------PLMGIGT 81 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 L A+ A+ ++ + + L I L E +F ++ W++ +P +MP + Sbjct: 82 -LPAVTALVIYAIFPILQNTITGLNGIDPSLVEAGTAFGMTKWERLKTFEIPIAMPVI-- 138 Query: 195 NMMMSMSGGWFFVVASEMIVVGD----TVIPLPGIGSYIALAIKEQDLLAILYAMLT--M 248 MSG V S ++++G ++I G+GS+I L I + IL ++ + Sbjct: 139 -----MSG----VRTSAVMIIGTATLASLIGAGGLGSFILLGIDRNNANLILIGAISSAL 189 Query: 249 LGVIF 253 L +IF Sbjct: 190 LAIIF 194 >gi|307326565|ref|ZP_07605759.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] gi|306887759|gb|EFN18751.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] Length = 269 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 32/71 (45%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ G +++ NV AG E ++ + W R+++LPG P +TG + Sbjct: 140 LIALGVTFHLYLNVYAGIRGVDAQLIEAGTALGLGRWGLIRHVVLPGALPGAMTGLRYSL 199 Query: 515 GGAWNASIVSE 525 AW A + E Sbjct: 200 ATAWLALVFGE 210 >gi|254460099|ref|ZP_05073515.1| taurine ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206676688|gb|EDZ41175.1| taurine ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 436 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ IP L + +++F IG E+ I +F + +W M + + + Sbjct: 279 PIVEFMRPIPPLALIPLIIIWFG-------IG-EIGKIVLLFLAALWIMIIAARSGVSGV 330 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + S S WQ + VP S+P + ++M W VVA+E++ Sbjct: 331 AITKVHAAYSLGASKWQILGKVIVPNSLPDIFTGARVAMGVCWGTVVAAELVAANV---- 386 Query: 222 LPGIGSYIALAIKEQ 236 G+G I A K Q Sbjct: 387 --GLGKMIVTASKFQ 399 >gi|162451650|ref|YP_001614017.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161162232|emb|CAN93537.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 281 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 10/149 (6%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LR+ + V + L LA R + ++ P + ++ +P+ + ++ Sbjct: 90 LRVTAGFVAAALLAVPLGVLAGAFRSIAALIEPPTEFLRYVPVPALIPLVMI-------A 142 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 IG E A + +F + + + +P L +VS+S + + W + P ++ Sbjct: 143 AGIG-EGAKVLLVFLGTFFQLLLMTADEVRRVPAPLLQVSQSLGATRREIVWRVLAPAAL 201 Query: 190 PGLVWNMMMSMSG-GWFFVVASEMIVVGD 217 PG +W+ + +G W +VV +E++ + Sbjct: 202 PG-IWSALRMCNGWAWSYVVVAELVAATE 229 >gi|21225809|ref|NP_631588.1| ABC-transport protein, membrane protein [Streptomyces coelicolor A3(2)] gi|289767037|ref|ZP_06526415.1| ABC-transporter [Streptomyces lividans TK24] gi|7799280|emb|CAB90902.1| putative ABC-transport protein, membrane component [Streptomyces coelicolor A3(2)] gi|289697236|gb|EFD64665.1| ABC-transporter [Streptomyces lividans TK24] Length = 267 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E IF IF + S +Q + N+ R L +R F + VP S P ++ Sbjct: 135 ETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVPASTPFILV 194 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 M + + W +VA+E+I + G+G + A DL I ++++ + L Sbjct: 195 GMRVGLGSAWATLVAAELIAAQE------GLGYRMQNAQLYYDLPTIFVGLISIGILGLL 248 Query: 255 YDQLLF---RPMIVWSNK 269 D++L R + W + Sbjct: 249 MDRVLLLAERRLTRWQER 266 >gi|327480625|gb|AEA83935.1| ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 271 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 8/155 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + + R+ S + I+ + A G L P+L ++ +P L L + Sbjct: 73 QDTASSLKRLGSGLAIAAVAGLCLGVAAGTLPLFGAPLSPLLTVLSMVPPLAILPILFIV 132 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F EL+ + I + + Q IPR+L +++ + W Sbjct: 133 FGL--------GELSKVMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWTLILR 184 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 L +P +P L+ ++ + + W F++A+E I D Sbjct: 185 LVLPQLLPRLLISLRLVLGSAWLFLIAAEAIASTD 219 >gi|317055240|ref|YP_004103707.1| binding-protein-dependent transport systems inner membrane component [Ruminococcus albus 7] gi|315447509|gb|ADU21073.1| binding-protein-dependent transport systems inner membrane component [Ruminococcus albus 7] Length = 306 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 12/184 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++M + ++A I IP+G+++G+ + + A L + P VF P ++ + Sbjct: 115 AVSMITITTGYVLALITAIPIGLFLGWNAQVGKVGEQIANFLGSIPPIVFIPYTLALLPT 174 Query: 444 YHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + S+ +IF T ++ IL ++G E A F + ++LP Sbjct: 175 FK-----SCSIFVIFITAFFPILSGTMSGVQNINKTTIESAKIFCPSKTYMLYSVLLPAS 229 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P G C S + + + + +G+G YI T G+F +++G++ + Sbjct: 230 LPQIFDG----CNMGLLLSFI--LLTSAEMIGGNSGIGFYIQYYTNFGNFTRIMVGIVFL 283 Query: 563 CCFV 566 V Sbjct: 284 GTIV 287 >gi|218961821|ref|YP_001741596.1| Hydroxymethylpyrimidine transport system permease protein [Candidatus Cloacamonas acidaminovorans] gi|167730478|emb|CAO81390.1| Hydroxymethylpyrimidine transport system permease protein [Candidatus Cloacamonas acidaminovorans] Length = 259 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 21/206 (10%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + T + +S ++IS++ + A SR + ++ P L I Q++PI+ +++ Sbjct: 53 HHLKPTLIEAISGLLISIVLGSITAIAMNLSRLIKQIIYPYLIISQTVPIIAVAPLLIIW 112 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F G I A+ IFA+ + + +Y ++ D + S + ++ F Sbjct: 113 F-----GYGISAK---IFAVVLMCFFPIALGLYDGFRSVSIDQIRLLTSMGATPYKIFRL 164 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 L +P ++P + +S + + V+ + V+G+ + G+G Y+ A I Sbjct: 165 LKIPSALPNFFTGLKLSAT---YSVMGA---VIGEWLGGTSGLGIYMTRATNVHQTAHIF 218 Query: 243 YAM-------LTMLGVIFLYDQLLFR 261 + L + G++ L D++L + Sbjct: 219 AVIIVFVAVSLALFGIVALLDRILLK 244 >gi|305390407|gb|ADM52730.1| ABC transporter [Paenibacillus sabinae] Length = 164 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W I+F+ ++G D + A SF ++ R ++LP FP +TG A G A Sbjct: 46 WPIMFSTLSGMIHADADTVKAARSFGLSRLRLTTKVLLPLAFPSILTGTRLAAGYALLFL 105 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN-------RFLW 574 I +E+ T+GLG I + ++ GVLI+ + L+ + L Sbjct: 106 IAAEMMG------STSGLGFMIYTAQANYQIVQMFSGVLIIAVLAIVLDGIMSAAGKRLV 159 Query: 575 HP 576 HP Sbjct: 160 HP 161 >gi|260460056|ref|ZP_05808309.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gi|259034267|gb|EEW35525.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 255 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 42/200 (21%), Positives = 78/200 (39%), Gaps = 17/200 (8%) Query: 356 AIGIAW------QSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWI 408 A G+ W S G + +WL +M+R+ + +IAS + IP+G+ I Sbjct: 26 ATGLGWVKPIFLPSPGSVATQIVKLATEGTLWLDLRASMYRISIGFLIASALSIPIGVLI 85 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G + I+P + P F PL + + + L++ GT + + + Sbjct: 86 GSFRSWEAAIEPLVDFIRYMPVVAFVPLSI----LWAGTGDTQKFLIIFIGTFFQQVLMI 141 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 + P DF + + + + I++P P + G AW +++E+ + Sbjct: 142 MDNVKRVPADFIGLGRTLGLPDRKILTRIVVPSALPGIWDTLRISLGWAWTWLVLAELVA 201 Query: 529 WGHIHLRTTGLGAYIAESTE 548 T+GLG I S Sbjct: 202 ------ATSGLGYRITVSQR 215 >gi|83645026|ref|YP_433461.1| spermidine/putrescine ABC transporter membrane protein [Hahella chejuensis KCTC 2396] gi|83633069|gb|ABC29036.1| ABC-type spermidine/putrescine transport system, permease component I [Hahella chejuensis KCTC 2396] Length = 288 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 33/66 (50%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++I E A +F + + M + S + +DL E WQ+F+++ +P Sbjct: 142 PIQMIYTEFAVVFGLTYILLPFMALPLISSFDKLDKDLIEAGHDLGAGFWQRFYHIVLPL 201 Query: 188 SMPGLV 193 +MPG+V Sbjct: 202 TMPGVV 207 >gi|325266979|ref|ZP_08133649.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] gi|324981479|gb|EGC17121.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] Length = 505 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%) Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 +I+Q+IP L L + + P +I L A+ IF + Y L I + Sbjct: 56 NILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQN--------TYLGLTQIDQS 107 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 +++ +F LS WQ W + +P ++P ++ Sbjct: 108 IQDAYTAFGLSRWQSLWRIELPMALPAMI 136 >gi|312967421|ref|ZP_07781636.1| inner membrane ABC transporter permease protein yehY [Escherichia coli 2362-75] gi|312287618|gb|EFR15523.1| inner membrane ABC transporter permease protein yehY [Escherichia coli 2362-75] Length = 235 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P G A+ A+ + + + Sbjct: 65 LLNVIQTVPSIALFGLLIAPLAALVTAFPWLGMLGIAGTGMTPALIALVLYALLPLVRGV 124 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 125 VVGLNQIPRDVLESARAMGMSGVQRFLHVQLPLALP 160 >gi|118581559|ref|YP_902809.1| binding-protein-dependent transport systems inner membrane component [Pelobacter propionicus DSM 2379] gi|118504269|gb|ABL00752.1| binding-protein-dependent transport systems inner membrane component [Pelobacter propionicus DSM 2379] Length = 742 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 14/108 (12%) Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+PR+L S + S WQ W + +P ++PG+ +M+ G+ + MIV+ Sbjct: 614 DAISNVPRNLTAASLALGASRWQTAWRVVLPSALPGVFSAVMI----GFGRAIGETMIVL 669 Query: 216 ---GDTVI-------PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 G+T I L + + IA+ I E L LY +L + V+ Sbjct: 670 MATGNTPIMSWSIFNGLRSLSANIAVEIPEAPLDGSLYRVLFLSAVLL 717 >gi|326780797|ref|ZP_08240062.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326661130|gb|EGE45976.1| ABC-type transporter, integral membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 296 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 31/71 (43%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ G +++ NV AG E S + W R+++LPG P +TG + Sbjct: 167 LIALGVAFHLYLNVYAGIRGVDAQLIEAGESLGLGRWGLVRHVVLPGALPGAMTGLRYSL 226 Query: 515 GGAWNASIVSE 525 AW A + E Sbjct: 227 ATAWLALVFGE 237 >gi|239820192|ref|YP_002947377.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239805045|gb|ACS22111.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 256 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 15/161 (9%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 R L + P+++ +++P + + +VYF IG E A +F + + Sbjct: 90 RGLRSFMDPVINFFRALPPIALIPLVIVYFG-------IG-EAAKTAILFYASFFAGVIV 141 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 MY+ + I +V+R+ S + F + VP ++P ++ + +++ W +VASE+I Sbjct: 142 MYEGIAQISPIYIKVARTLGASDVEIFGKVIVPLTIPHILTAVRVALGVAWATLVASELI 201 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 G+G+ I A L I+Y + +GVI L Sbjct: 202 AAQQ------GLGALIQNA-SSFFQLDIIYVGIICIGVIAL 235 >gi|220919715|ref|YP_002495018.1| choline ABC transporter, permease protein [Methylobacterium nodulans ORS 2060] gi|219952135|gb|ACL62526.1| choline ABC transporter, permease protein [Methylobacterium nodulans ORS 2060] Length = 285 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 25/166 (15%) Query: 102 PILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P+LD+MQ+IP +L T+V F + + PG + A I +Q+ + + Sbjct: 131 PLLDLMQTIPTFVYLIPTLVLFGLGMVPGIISTVIFALPAPIRLTQL---------GISS 181 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIVVG 216 +P L E + ++ + Q + + +P +MP G+ +M+S+S M+V+ Sbjct: 182 VPESLREAALAYGATRTQMLFKVELPSAMPTILAGVTQCIMLSLS----------MVVIA 231 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 ++ G+G + A+ ++ A L ++ + + D++ RP Sbjct: 232 -ALVGADGLGKPVVRALNTVNIAMGFEAGLAIVVLAIILDRVCKRP 276 >gi|89070895|ref|ZP_01158130.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Oceanicola granulosus HTCC2516] gi|89043534|gb|EAR49745.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Oceanicola granulosus HTCC2516] Length = 345 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 14/117 (11%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AA RL + P+LD+MQ++P +L +V+F + + PG + A + + + + Sbjct: 184 AAHRPRLYAWMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLI-----ATVIFVLPAPI- 237 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMS 201 +T Y + + P L E +R+F + Q + +P++ P GL +M+S+S Sbjct: 238 RLT---YLGVSSTPPALLEAARAFGATPRQTLFKAELPYAFPQIMAGLNQTIMLSLS 291 >gi|296102566|ref|YP_003612712.1| putative osmoprotectant transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057025|gb|ADF61763.1| putative osmoprotectant transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 215 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P+LG T ++ F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPVLGIATIVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++P L E R ++ WQ+ ++ +P ++P Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|154243924|ref|YP_001409497.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154163046|gb|ABS70261.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 257 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 N+ R L EV + + WQ W + +P S P + + + GW +VA+EMI G +V Sbjct: 147 NVERSLWEVGETLGGNRWQLVWKIVLPSSAPTIAAGARLGLGIGWACIVAAEMI-GGASV 205 Query: 220 IPLPGIGSYI 229 GIGS I Sbjct: 206 ----GIGSMI 211 >gi|149204707|ref|ZP_01881671.1| glycine betaine/proline ABC transporter, permease protein, putative [Roseovarius sp. TM1035] gi|149141816|gb|EDM29868.1| glycine betaine/proline ABC transporter, permease protein, putative [Roseovarius sp. TM1035] Length = 494 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 8/117 (6%) Query: 388 FRVVVLIIIASI----IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 + V L+ ASI I IP+GIW + QP + PA V+ + +++ Sbjct: 308 MQTVALLGAASILCIVIGIPLGIWFARSKTAFAIAQPILDFMQTMPAFVYL---IPVIAF 364 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + +IFG I + G + D KE A ++ T W+ R + LP Sbjct: 365 FGTGKPPGIIATLIFGMPPVIRLTTL-GLTGVAEDVKEAARAYGATEWQVLRGVELP 420 >gi|114562993|ref|YP_750506.1| binding-protein-dependent transport systems inner membrane component [Shewanella frigidimarina NCIMB 400] gi|114334286|gb|ABI71668.1| binding-protein-dependent transport systems inner membrane component [Shewanella frigidimarina NCIMB 400] Length = 283 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 23/153 (15%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 A +S R+ +L PILD MQ+ P +L V+ F G G IFA+ V Sbjct: 117 AGRSDRVNNILRPILDAMQTTPAFVYLVPIVMLF---SIGNTAGVLATIIFAL-PPLVRL 172 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 + + Q + +L E + +F + Q + +P ++P GL +MMS+S Sbjct: 173 TSLGIRQ----VHPELVEAALAFGATSSQVLLKVQIPLALPTIMAGLNQTIMMSLS---- 224 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 VV + MI G G+G+ + L + D+ Sbjct: 225 MVVIAAMIGAG-------GLGAPVVLGLNTLDI 250 >gi|325677667|ref|ZP_08157319.1| ABC transporter, permease protein [Ruminococcus albus 8] gi|324110635|gb|EGC04799.1| ABC transporter, permease protein [Ruminococcus albus 8] Length = 306 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 12/184 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++M + I+A I IP+G+++G+ + + A L + P VF P ++ + Sbjct: 115 AVSMITITTGYILALITAIPIGLFLGWNAQVGKVGEQIANFLGSIPPIVFIPYTLALLPT 174 Query: 444 YHLNPNLWLSLLMIFGTQWY-ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + S+ +IF T ++ IL ++G E A F + ++LP Sbjct: 175 FK-----SCSIFVIFITAFFPILSGTMSGVQNINKTTIESAKIFCPSKPYMLYSVLLPAS 229 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P G C S + + + + +G+G YI T G+F +++G++ + Sbjct: 230 LPQIFDG----CNMGLLLSFI--LLTSAEMIGGNSGIGFYIQYYTNFGNFTRIMVGIVFL 283 Query: 563 CCFV 566 V Sbjct: 284 GTIV 287 >gi|223042145|ref|ZP_03612316.1| spermidine/putrescine transport system permease protein PotB [Actinobacillus minor 202] gi|223017084|gb|EEF15525.1| spermidine/putrescine transport system permease protein PotB [Actinobacillus minor 202] Length = 286 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 6/99 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 144 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFIRVTIPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG 224 +MPG+V ++ + + G F+V ++++ G T PL G Sbjct: 204 TMPGIVSGCLLVLLPAMGMFYV--ADLLGGGKT--PLVG 238 >gi|167815902|ref|ZP_02447582.1| ABC transporter, permease protein [Burkholderia pseudomallei 91] Length = 277 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 105 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 156 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 157 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 216 >gi|260430953|ref|ZP_05784924.1| glycine betaine/proline ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414781|gb|EEX08040.1| glycine betaine/proline ABC transporter, permease protein [Silicibacter lacuscaerulensis ITI-1157] Length = 713 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 15/137 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI D++Q+IP+ FL ++ F IG E +A AI + M L N Sbjct: 533 PICDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAICAYAIVPMIRYTRHGLVNT 584 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P ++ E + S + WQ + P++ P ++ + ++ + A M+V+ +I Sbjct: 585 PDEMMEAAISSGATEWQIMRDVRAPYAAPTILLGLNQTI------LYAFAMLVIA-ALIG 637 Query: 222 LPGIGSYIALAIKEQDL 238 G+G I LA+ + D+ Sbjct: 638 TTGLGQSIYLALGQADV 654 >gi|227494339|ref|ZP_03924655.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces coleocanis DSM 15436] gi|226832073|gb|EEH64456.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces coleocanis DSM 15436] Length = 270 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 37/80 (46%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E IF IF + + S +Q + N+ + L +R + F + VP S P ++ Sbjct: 137 GEQPKIFVIFLAAFLSCVISTFQGVINVDKTLINAARVLGAGDGRIFAKVVVPASTPFIL 196 Query: 194 WNMMMSMSGGWFFVVASEMI 213 M + + W VVA+E+I Sbjct: 197 VGMRVGLGSAWATVVAAELI 216 >gi|241206618|ref|YP_002977714.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860508|gb|ACS58175.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 278 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 23/182 (12%) Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 I + F P + + P P PLVV + L P + L L+ F + +L Sbjct: 103 ILMDFVPFMRRALLPVFIASQTLPLVAIAPLVVLWFGF-GLLPKILLVALVTF---FPLL 158 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 ++ G + D E+ S + WR +R LP PY+ G + A +I +E Sbjct: 159 VALLQGYESTDRDIAELLYSMKASRWRIFRLARLPSSLPYFFAGLRISITYAVVGAIFAE 218 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSF-PEVVL------GVLIMCCFVLAL--NRFL--W 574 A GLG YI + K +F P++VL VL +C F L L R + W Sbjct: 219 YAGAAR------GLGIYILNA--KNNFRPDLVLAAVIVSAVLTLCLFGLTLMIQRLVMPW 270 Query: 575 HP 576 P Sbjct: 271 QP 272 >gi|170743816|ref|YP_001772471.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168198090|gb|ACA20037.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 244 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%) Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 GA +E+A +F W R+++LP + P+ V A + AW +V E+ Sbjct: 136 GARGLDPGLQEMAQAFRFDRRTWIRHVLLPQLEPFAVAAARSGLSLAWKIVLVVELLG-- 193 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 R G+G I+ + ++ L+ +LA++ L PL + R Sbjct: 194 ----RPNGVGYAISYYFQLFDVAALIGYSLVFSAVMLAVDLLLLQPLDAHVRR 242 >gi|52081951|ref|YP_080742.1| glycine betaine/carnitine/choline ABC transporter membrane protein [Bacillus licheniformis ATCC 14580] gi|52787335|ref|YP_093164.1| OpuCB [Bacillus licheniformis ATCC 14580] gi|319647814|ref|ZP_08002032.1| OpuCB protein [Bacillus sp. BT1B_CT2] gi|52005162|gb|AAU25104.1| glycine betaine/carnitine/choline ABC transporter (membrane protein) [Bacillus licheniformis ATCC 14580] gi|52349837|gb|AAU42471.1| OpuCB [Bacillus licheniformis ATCC 14580] gi|317390155|gb|EFV70964.1| OpuCB protein [Bacillus sp. BT1B_CT2] Length = 217 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 24/116 (20%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+++ ++F + + ++ V++ +++I+Q++P L L F + L GK+ Sbjct: 29 AVLLGIIFAVPLGVVLTRMKKGAGVVIGVVNIIQTLPSLAILAF---FIPLLGVGKI--- 82 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AI A+F V + + Y + + ++L E + ++ W++ + +P S+P Sbjct: 83 --PAIVALFFYSVLPILRNTYTGVKGVNQNLLESGKGIGMTAWEQIRLVELPLSVP 136 >gi|319796043|ref|YP_004157683.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315598506|gb|ADU39572.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 268 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 12/123 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T L A V +L +F++ +S+R+ L P ++Q PI+ +++ N Sbjct: 72 TVLSFALATVAGVLISFLFV----QSKRIETALFPYAVLLQVTPIVAVAPLIIIWVKNPV 127 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + A L A+F I + N T L +I DL+ + R + WQ+ L +P Sbjct: 128 AAMTVCAALVALFPIIS----NTTL----GLRSIDPDLQSYFKLNRATRWQQLVRLRIPS 179 Query: 188 SMP 190 ++P Sbjct: 180 ALP 182 >gi|299770776|ref|YP_003732802.1| binding-protein-dependent transport systems inner membrane component [Acinetobacter sp. DR1] gi|298700864|gb|ADI91429.1| binding-protein-dependent transport systems inner membrane component [Acinetobacter sp. DR1] Length = 259 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 24/168 (14%) Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL------- 454 +P+G+ +G P +++ + PF Q L P PLVV +WL + Sbjct: 84 VPLGLLMGRSPVLNAILDPFVQFLRPIPKIALIPLVV-----------VWLGIGEESKFF 132 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ T ++ A + P + A + + +ILP P T + Sbjct: 133 LIFIATLLSVIVGATAASQNVPYGLIQAAQTMGLGKTAILFRVILPSSLPEIFTTIRLSI 192 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 G W + I +E+ + T+GLG I + V++G++++ Sbjct: 193 GIGWTSLIAAEMVA------ATSGLGWMIINAGSYLRTDVVIVGIILL 234 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 8/125 (6%) Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L +S L +L P + ++ IP + + VV+ IG E + F IF + + Sbjct: 89 LMGRSPVLNAILDPFVQFLRPIPKIALIPLVVVWLG-------IGEE-SKFFLIFIATLL 140 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 ++ + N+P L + +++ L + + +P S+P + + +S+ GW ++ Sbjct: 141 SVIVGATAASQNVPYGLIQAAQTMGLGKTAILFRVILPSSLPEIFTTIRLSIGIGWTSLI 200 Query: 209 ASEMI 213 A+EM+ Sbjct: 201 AAEMV 205 >gi|209550618|ref|YP_002282535.1| binding-protein-dependent transporters inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536374|gb|ACI56309.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 375 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 8/114 (7%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 V+ L F A LA + L L+PI +++ ++PI+G V++F +P K + Sbjct: 189 VVGCLSGFAVAVLADRITFLRRGLLPIGNMVSALPIIGVAPVMVMWFGFDWPSKAAVVII 248 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 F + + V + S ++ RDL R++ S WQ L +P +MP Sbjct: 249 MTFFPMLVNTVAGLAAS-----GSMERDLM---RTYASSDWQTLLKLKLPAAMP 294 >gi|298346827|ref|YP_003719514.1| ABC transporter membrane protein [Mobiluncus curtisii ATCC 43063] gi|298236888|gb|ADI68020.1| ABC superfamily ATP binding cassette transporter, membrane component [Mobiluncus curtisii ATCC 43063] Length = 267 Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 11/175 (6%) Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++ I+ +P+ I +++ +QPF A PA PL++ + P L +++ Sbjct: 86 VLGLIVSVPLSFAIHHLRLLNAAVQPFLGASQAVPAVALAPLLL----IWLPTPRLAIAM 141 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L + IL + G E A W RY+ +P + P + G Sbjct: 142 LCALMVFFPILVSTTVGLHHLNASILEAAKLDGAGTWDLLRYMEIPLVLPSLLGGIRNGV 201 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 + ++V E+ GH G+G I + P + + LIM C V AL Sbjct: 202 TLSITGAVVGEMVIGGH------GMGTLITLQSHNVDTPGMFVS-LIMICTVAAL 249 >gi|28378074|ref|NP_784966.1| sugar ABC transporter, permease protein (putative) [Lactobacillus plantarum WCFS1] gi|308180256|ref|YP_003924384.1| sugar ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270908|emb|CAD63813.1| sugar ABC transporter, permease protein (putative) [Lactobacillus plantarum WCFS1] gi|308045747|gb|ADN98290.1| sugar ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 276 Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%) Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + FV+ + +VL ++ ++ I F T ++ +N Y VI L + F Sbjct: 95 YAFVFLEFKYRDALFYLVLATMMLPFEAEVIPNFHTVRAMHLLNHYAVMVI-PFLTSAFG 153 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF + Q+ IPRDL+E + LS WQ + + +P+S L+ S Sbjct: 154 IFM---------LRQAFLQIPRDLKEAADVDGLSHWQFYCRVALPYSRISLLTLAAYSFL 204 Query: 202 GGW 204 G W Sbjct: 205 GSW 207 >gi|292670600|ref|ZP_06604026.1| ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292647766|gb|EFF65738.1| ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 247 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 43/204 (21%), Positives = 94/204 (46%), Gaps = 23/204 (11%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R++V + A + P+G+ +G+ P ++ + P L P P+V+ Sbjct: 57 SLMRIMVGLFAAVVAGYPIGVLMGYFPRVNRLLAPILYLSYPIPKIALLPVVMLLFGVGE 116 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPND----FKEVASSFHITGWRWWRYIILPG 501 + L + L+++F ++ V +A P++ + + +SF + R+IILP Sbjct: 117 TSKLLLVFLIIVFQ----VVVAVRDAIAAIPSETYFPLRVLGASFT----QLVRHIILPA 168 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P ++T A A + +E ++G + G+G YI ++ + ++ ++ G++ Sbjct: 169 SLPKFITAVRVAMATAISVLFFTE--TFGTQY----GIGYYIMDAWLRVNYLDMYAGIV- 221 Query: 562 MCCFVLALNRFLWHPLYLYGTRCL 585 VL++ FL+ L + R L Sbjct: 222 ----VLSMMGFLFFVLLDFAERRL 241 >gi|282857566|ref|ZP_06266792.1| ABC transporter, permease protein [Pyramidobacter piscolens W5455] gi|282584602|gb|EFB89944.1| ABC transporter, permease protein [Pyramidobacter piscolens W5455] Length = 345 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 12/171 (7%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 GI G+ +++ I+PF +LL A P+ + P+V+ + S+ +I WY Sbjct: 173 TGIACGYNRNVNYWIEPFTRLLGAIPSTTWLPVVMVLAATLFRG-----SVFIIALGVWY 227 Query: 464 -ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G + + E A + + G R I +P P + G A A + Sbjct: 228 SVTIATKTGITNIDPAYFEAARTLGVKGMRLVGAIAVPSALPNILQGMTQGMSTACVALM 287 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 V+E+ +GLG YI + + V+ +C + +N L Sbjct: 288 VAEMIG------VESGLGWYITWQKSWARYGNMYAAVVAICVIFVLVNALL 332 >gi|239983649|ref|ZP_04706173.1| ABC transporter permease protein [Streptomyces albus J1074] Length = 264 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 33/71 (46%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++ G + + NV AG E S ++ W R+++LPG P +TG + Sbjct: 135 IITMGVMFPLYLNVYAGIRGVDAQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSL 194 Query: 515 GGAWNASIVSE 525 G AW A + +E Sbjct: 195 GIAWLALVFAE 205 >gi|297559634|ref|YP_003678608.1| binding-protein-dependent transporters inner membrane component [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844082|gb|ADH66102.1| binding-protein-dependent transport systems inner membrane component [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 322 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 8/148 (5%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQSIPILGFLTFTVV 121 Q+ + ++++ + + + A A+ R RL + +L ++Q +P+ + + Sbjct: 107 QFLGNSLFLTVASVAMGAFLSLLAAVAVARFRFRLRTAFIILLLVIQMVPMEAMIISIFI 166 Query: 122 YFMNLYPGKVIGAEL----AAIFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSG 176 F L V G EL + + ++T+ +T M + + +P++LEE + S Sbjct: 167 NFRQL--SDVSGVELLGNLSGLLIVYTAVSLPITIMMLRGFVAAVPKELEEAAAIDGASS 224 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 W FW + +P PGLV + + W Sbjct: 225 WTVFWRILMPLVAPGLVAASIFAFITAW 252 >gi|251800143|ref|YP_003014874.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247547769|gb|ACT04788.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length = 264 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 11/122 (9%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 K+ RL L P L +++++P L +++F K++ A F ++ + Sbjct: 96 KAERL---LDPSLQLLRTLPHLAVAPLFILWFGFGETSKILLIAKGAFFPLYVNA----- 147 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ R+L +V+R + WQ L +P S+P L + +S++ W +V +E Sbjct: 148 ---FLGVRSVDRNLFDVARVLEFTRWQTITKLILPASLPSLFLGIRLSIAVSWLGLVVAE 204 Query: 212 MI 213 M+ Sbjct: 205 MM 206 >gi|154686758|ref|YP_001421919.1| YqgH [Bacillus amyloliquefaciens FZB42] gi|154352609|gb|ABS74688.1| YqgH [Bacillus amyloliquefaciens FZB42] Length = 309 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 VL P+++++ IP + GF+ TV V F+ + G L A + + + S+ Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIGSFKSSGTGHSLLAGTIVLSVMILPTVTSIS 184 Query: 156 -QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L ++P+ L + S + + WQ + +P + P L+ +++ M+ + +A +M++ Sbjct: 185 ADALASLPKHLRDGSYALGATRWQTIRKVLIPAAFPTLLTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 ++P Sbjct: 245 GNTKLLP 251 >gi|328883293|emb|CCA56532.1| binding-protein-dependent transport systems inner membrane component [Streptomyces venezuelae ATCC 10712] Length = 228 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 4/119 (3%) Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VV ++IA ++ +P+ + + RP + + LL P+ F L+ + ++ L+ L Sbjct: 37 VVSVLIALVVAVPLALLVRARPRFAGPVLGLTTLLYTIPSLAMFSLL---LPFFGLSAAL 93 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 ++ L+++ ++ N +AG ++ P + +E A R + LP P + G Sbjct: 94 VVTGLVLYALT-ILVRNTLAGLASVPAETREAARGMGYGSLRLLWQVELPLALPVLMAG 151 >gi|323940801|gb|EGB36989.1| inner membrane transport system [Escherichia coli E482] Length = 302 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P G A+ A+ + + + Sbjct: 132 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGV 191 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 192 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 227 >gi|312139011|ref|YP_004006347.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311888350|emb|CBH47662.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 271 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAEL 136 +SL+ + A L S L VP+ + Q++PI+ +++F L P KV+ L Sbjct: 83 VSLVVAWALAILVDFSPWLRRAFVPLFVVSQTLPIIAIAPLMIIWFGFGLLP-KVLVIAL 141 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A F M + + + R+ + RS S WQ+F Y+ +P ++P Sbjct: 142 ATFF--------PMAIGLIEGFASADREAGALLRSMGASKWQQFRYVRLPSALP 187 >gi|323526143|ref|YP_004228296.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] gi|323383145|gb|ADX55236.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] Length = 274 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 17/202 (8%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 FT ++ +W IT+ V+ + + I + VG+W+ P S+ P+ + + P Sbjct: 65 FTSGEIYLHLW---ITLLETVLAFALGTGIGLGVGLWLALSPLASALFDPYIKAANSMPR 121 Query: 431 NVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 + P+ ++ L + L + ++F + + FNV G A Sbjct: 122 VILAPIF---GVWFGLGIWSKVALGVTLVF---FIVFFNVYQGVKEVSPVVLANARMLGA 175 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 G + RY+ LP + + T+ G A+ S+V E G+G I ++ Sbjct: 176 NGKQLLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEG 229 Query: 549 KGSFPEVVLGVLIMCCFVLALN 570 V G+L++ F L L+ Sbjct: 230 TFDINTVFAGILVLTAFALILD 251 >gi|15890822|ref|NP_356494.1| ABC transporter, membrane spanning protein (aliphatic sulphonate) [Agrobacterium tumefaciens str. C58] gi|15159110|gb|AAK89279.1| ABC transporter, membrane spanning protein (aliphatic sulphonate) [Agrobacterium tumefaciens str. C58] Length = 260 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 19/165 (11%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q++ P PLV+ ++ ++ L L+ G + I N + G E+ Sbjct: 103 QMIRNIPHLALIPLVIL---WFGIDEEAKL-FLVALGVFFPIYINTLLGIQGVDPQLVEM 158 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 ++ ++ + +R +ILPG P TG A G W IV+E S ++GLG Sbjct: 159 GRTYGMSPFTLFRRVILPGALPSIFTGLRYALGIMWLTLIVAETIS------SSSGLGYM 212 Query: 543 IAESTEKGSFPEVVLGVLI---MCCFVLALNRFL------WHPLY 578 ++ E VVL +LI + + RFL WHP + Sbjct: 213 AMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQWHPAF 257 >gi|73669286|ref|YP_305301.1| phosphate ABC transporter permease [Methanosarcina barkeri str. Fusaro] gi|72396448|gb|AAZ70721.1| phosphate ABC transporter membrane protein 2, PhoT family [Methanosarcina barkeri str. Fusaro] Length = 307 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 13/42 (30%), Positives = 26/42 (61%) Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 A PN+++E + + ++ W+ R+ +LP P +TG+I + G Sbjct: 182 AVPNEYRESSLALGVSKWQTIRHAVLPAAIPGIITGSILSIG 223 >gi|23500215|ref|NP_699655.1| taurine ABC transporter permease [Brucella suis 1330] gi|62317665|ref|YP_223518.1| taurine ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|83269648|ref|YP_418939.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|148558660|ref|YP_001257443.1| putative taurine ABC transporter permease [Brucella ovis ATCC 25840] gi|189022914|ref|YP_001932655.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|254691161|ref|ZP_05154415.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 6 str. 870] gi|254698945|ref|ZP_05160773.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 2 str. 86/8/59] gi|254702857|ref|ZP_05164685.1| Binding-protein-dependent transport systems inner membrane component [Brucella suis bv. 3 str. 686] gi|254706021|ref|ZP_05167849.1| Binding-protein-dependent transport systems inner membrane component [Brucella pinnipedialis M163/99/10] gi|254711679|ref|ZP_05173490.1| Binding-protein-dependent transport systems inner membrane component [Brucella pinnipedialis B2/94] gi|254712291|ref|ZP_05174102.1| Binding-protein-dependent transport systems inner membrane component [Brucella ceti M644/93/1] gi|254715362|ref|ZP_05177173.1| Binding-protein-dependent transport systems inner membrane component [Brucella ceti M13/05/1] gi|254732391|ref|ZP_05190969.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 4 str. 292] gi|256029687|ref|ZP_05443301.1| Binding-protein-dependent transport systems inner membrane component [Brucella pinnipedialis M292/94/1] gi|256157840|ref|ZP_05455758.1| Binding-protein-dependent transport systems inner membrane component [Brucella ceti M490/95/1] gi|256253198|ref|ZP_05458734.1| Binding-protein-dependent transport systems inner membrane component [Brucella ceti B1/94] gi|256256347|ref|ZP_05461883.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 9 str. C68] gi|260167223|ref|ZP_05754034.1| Binding-protein-dependent transport systems inner membrane component [Brucella sp. F5/99] gi|260544898|ref|ZP_05820719.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|261756627|ref|ZP_06000336.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|23463818|gb|AAN33660.1| taurine ABC transporter, permease protein, putative [Brucella suis 1330] gi|62197858|gb|AAX76157.1| hypothetical taurine ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82939922|emb|CAJ12935.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis biovar Abortus 2308] gi|148369945|gb|ABQ62817.1| putative taurine ABC transporter, permease protein [Brucella ovis ATCC 25840] gi|189021488|gb|ACD74209.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|260098169|gb|EEW82043.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|261736611|gb|EEY24607.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] Length = 272 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252 G G+GSYI A DL + A+L+++G+I Sbjct: 221 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 255 >gi|311899644|dbj|BAJ32052.1| putative aliphatic sulfonate ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 282 Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 24/178 (13%) Query: 95 RLGMVLV-PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ + +++++P L + +V+F K+ A+ + TS + M S Sbjct: 110 RLGEELLDSAVQVLRTVPFLALVPLFMVWFGITETAKI------ALIGVATS--FPMYVS 161 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + N R L E RSF LS W + +P ++P L+ + +SM+ ++A+E I Sbjct: 162 ASGGVRNTDRKLVEAMRSFGLSRWAIVREVVLPGALPALLSGLRLSMTLSVIALIAAEEI 221 Query: 214 VVGDTVIPLPGIGSYIALA--IKEQDLLAI---LYAMLTML--GVIFLYDQLLF--RP 262 + GIG +A A D+LA+ +Y +L + G + + +++L RP Sbjct: 222 NSTE------GIGYLMAQAQNFSRTDVLAVCILIYGLLGLAADGAVRVLERVLMPWRP 273 >gi|254556288|ref|YP_003062705.1| sugar ABC transporter, permease protein (putative) [Lactobacillus plantarum JDM1] gi|254045215|gb|ACT62008.1| sugar ABC transporter, permease protein (putative) [Lactobacillus plantarum JDM1] Length = 276 Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%) Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + FV+ + +VL ++ ++ I F T ++ +N Y VI L + F Sbjct: 95 YAFVFLEFKYRDALFYLVLATMMLPFEAEVIPNFHTVRAMHLLNHYAVMVI-PFLTSAFG 153 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF + Q+ IPRDL+E + LS WQ + + +P+S L+ S Sbjct: 154 IFM---------LRQAFLQIPRDLKEAADVDGLSHWQFYCRVALPYSRISLLTLAAYSFL 204 Query: 202 GGW 204 G W Sbjct: 205 GSW 207 >gi|240948324|ref|ZP_04752710.1| spermidine/putrescine ABC transporter membrane protein [Actinobacillus minor NM305] gi|240297363|gb|EER47904.1| spermidine/putrescine ABC transporter membrane protein [Actinobacillus minor NM305] Length = 286 Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 6/99 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 144 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFIRVTIPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG 224 +MPG+V ++ + + G F+V ++++ G T PL G Sbjct: 204 TMPGIVSGCLLVLLPAMGMFYV--ADLLGGGKT--PLVG 238 >gi|192362263|ref|YP_001982784.1| AtsB [Cellvibrio japonicus Ueda107] gi|190688428|gb|ACE86106.1| AtsB [Cellvibrio japonicus Ueda107] Length = 284 Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust. Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 38/227 (16%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + W S + QD L I++FR+ I ++ + VG+ + P + + Sbjct: 66 ALVWASFVELAESGELQDNL------SISLFRLFSGFGIGAVAGVIVGVLLAISPQVRAY 119 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL-------FNVIA 470 + +LL P V P+++ LL+ G + I+ F V Sbjct: 120 LGLTFELLRHIPTLVMVPMLI---------------LLLGIGETFKIVILVKAVFFPVAQ 164 Query: 471 GASA----FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 A+ P F EV + + +R I+LP P +TG A G AW + E+ Sbjct: 165 AATDAVRNIPRGFIEVGRVYQLKPLALYRDILLPATVPPVLTGMRIALGRAWLILVAVEL 224 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + TG+G + + + V++GV++ L++ L Sbjct: 225 LA------ADTGIGQMMEFARQMLRLDIVLVGVVLTGLIGFGLDKSL 265 >gi|6019466|gb|AAD31786.2|AF126201_4 AtsB [Pseudomonas putida] Length = 535 Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust. Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 16/207 (7%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 T P +++ + L SLP+ + R L+ +V+ + L S V P Sbjct: 319 TSPLEVLRTLFSGLADGSLPEAMLLSLQRTLTGLVLGGGAGLLGGLLLGLSHPAERVFGP 378 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L ++ + + ++ +F K + LAA F + + + + ++ Sbjct: 379 SLSALRQVALFAWVPLLTAWFGLGEGAKTVFVALAAFFPLL--------IATQRGIASLS 430 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L E +R+ RL+ WQ+ L +P + P + + +S+ W + +E + Sbjct: 431 PQLGEAARTLRLNLWQRLRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYF--------M 482 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTML 249 P G +L I Q L + M ML Sbjct: 483 PSGGGIASLMIGAQQLFRMDQVMAAML 509 >gi|330447870|ref|ZP_08311518.1| binding--dependent transport system inner membrane component family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492061|dbj|GAA06015.1| binding--dependent transport system inner membrane component family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 297 Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust. Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 21/196 (10%) Query: 68 TTLRMLSAMVISLLFTFVYATLA----AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 T+R +S +++S L A+S R+ ++ P+LD+MQ++P +L V Sbjct: 102 NTMRTMSIILVSTLVAIGIGIPIGIAMARSDRVQRIVTPLLDVMQTMPAFVYLIPVV--- 158 Query: 124 MNLYPGKVIGAELAAIFAI-FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 M L GK+ G I+A+ ++ N+ + + ++ E + ++ S Q+ + Sbjct: 159 MLLGIGKIPGLIAVVIYAVPPVIRLTNLGIRL------VDEEVLEAATAYGASPMQRLFG 212 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P +MP ++ + ++ VV + MI V G+G + +I Q L Sbjct: 213 VQIPLAMPNIMAGINQTIMMALAMVVIASMIGV-------KGLGQPVLKSITNQYFTLGL 265 Query: 243 YAMLTMLGVIFLYDQL 258 L ++ + ++D++ Sbjct: 266 LNGLAIVALAIIFDRI 281 >gi|300855715|ref|YP_003780699.1| putative ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300435830|gb|ADK15597.1| putative ABC transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 247 Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T L + ++IS++ V A S R+ L PI+ + Q++PI +++F Sbjct: 56 TLLITIEGLLISIVLGVVLAVAMNISERIQRALYPIVIVTQTVPITALAPIFILWFGYGI 115 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 KV+ L F I T ++Y L + +D+EE+ ++ S F L P Sbjct: 116 WSKVLVTVLITFFPI--------TINVYDGLRSTRKDMEEILITYGASKKDIFMKLKFPA 167 Query: 188 SMP 190 S+P Sbjct: 168 SLP 170 >gi|325525062|gb|EGD02963.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 324 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 10/175 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+S I +P+GI G ++ +PF + PA F L+V+ + Y P + + Sbjct: 141 ISSAIGVPLGIVCGTFSALARLQEPFLEFFRYLPAPAFGALMVAILGIYD-APKI---AI 196 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 ++ GT + + + E A + + ++++PG+ P G Sbjct: 197 IVIGTLFQQVLIIANTTRKLEYGLFEAAMTLGTKKLKLLTHVVIPGVLPDLYRDQRILLG 256 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 AW IV+E+ ++G+ YI++ F V +L++ L + Sbjct: 257 WAWTYLIVAELVG------TSSGITWYISQQARYQHFDNVYAAILMIGIIGLGTD 305 >gi|323525534|ref|YP_004227687.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] gi|323382536|gb|ADX54627.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] Length = 276 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 16/68 (23%), Positives = 34/68 (50%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 +T S Q P L+E +R F + WQ+ ++ +P ++P L + ++ + W +V Sbjct: 157 VTLSTLQGFRGAPVTLDEAARVFGYTRWQRIVHVVLPSAVPTLATGVRLAFTKAWLALVV 216 Query: 210 SEMIVVGD 217 E++ + Sbjct: 217 VELVASSE 224 >gi|227871986|ref|ZP_03990372.1| binding-protein-dependent transport systems inner membrane component [Oribacterium sinus F0268] gi|227842162|gb|EEJ52406.1| binding-protein-dependent transport systems inner membrane component [Oribacterium sinus F0268] Length = 344 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 10/172 (5%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 I+ + GI G+ I+ I+PF +LL + P+ + P+V+ + ++L Sbjct: 163 IVGLFTGIACGYNKKINYWIEPFMKLLGSIPSTTWIPIVMVLATSLFRGSVFIIAL---- 218 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 G + I I G + E A + I +P P G + A A Sbjct: 219 GVWFSITLATITGIRNMDKSYYEAARTLGAKEKDLILEIAIPSALPSIFQGMVQAMSSAC 278 Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A +V+E+ +GLG YI + ++ ++++C + +N Sbjct: 279 MALMVAEMIG------VESGLGWYITWQKSWAEYGKMYGAIILICGIFVTVN 324 >gi|160901253|ref|YP_001566835.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] gi|160366837|gb|ABX38450.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] Length = 241 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 6/117 (5%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 L+ F W IL + AG + ++ +A S T ++LPGI +TG A Sbjct: 120 LLAFAAVWPILLSTAAGVAQLDRNWLLLARSLSATRTETVLRVVLPGITAQILTGVRLAI 179 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 G W + +E+ + GLG +I ++ ++ ++ E++ V+++ AL+ Sbjct: 180 GIIWIVLVPAEMLG------VSAGLGYFILDTRDRLAYSELMAAVVLIGALGYALDH 230 >gi|144900961|emb|CAM77825.1| ABC transporter, permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 273 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 22/115 (19%), Positives = 51/115 (44%), Gaps = 4/115 (3%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +GI G P++ + + PF +L+ P P++ L+ +L++ G + Sbjct: 98 LGIGTGLIPYVRAGLSPFIAVLSLIPPMAILPILFIVFGLDELSK----VVLIVIGIAPF 153 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 ++ ++ A P++ A + + W+ ++LP ++P + + G AW Sbjct: 154 LIRDLALRVEAIPSELVIKAQTLGASTWQIITRLVLPNVWPKLLDAVRLSLGPAW 208 >gi|310657351|ref|YP_003935072.1| binding-protein-dependent transport systems inner membrane component [Clostridium sticklandii DSM 519] gi|308824129|emb|CBH20167.1| Binding-protein-dependent transport systems inner membrane component [Clostridium sticklandii] Length = 206 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 12/191 (6%) Query: 384 CITMFRVVVLIIIASIIW-IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 I+ F +V+L +I SI+ + +GI I ++ I A +L P+ F +++ + Sbjct: 18 TISHFSIVILAMIISIVLGVIIGILITNNKQLAKLILNIANILMTIPSLALFSVLIPIMG 77 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 L L TQ I+ NV G E A ++ + I +P Sbjct: 78 IGKAPAIAGLVLY----TQLPIIRNVYTGIITIDPSIIEAAKGMGLSNSKIMLKIKIPLA 133 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 FP + G TA + +A++ + GLG YI + +G+ +++G +++ Sbjct: 134 FPVIMAGLRTATVMGIG---IGAIAAY----IGAGGLGEYIFQGINRGNDRMIIIGAIMV 186 Query: 563 CCFVLALNRFL 573 + +++ L Sbjct: 187 SLITILVDKSL 197 >gi|291455459|ref|ZP_06594849.1| ABC transporter permease [Streptomyces albus J1074] gi|291358408|gb|EFE85310.1| ABC transporter permease [Streptomyces albus J1074] Length = 278 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 33/71 (46%) Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++ G + + NV AG E S ++ W R+++LPG P +TG + Sbjct: 149 IITMGVMFPLYLNVYAGIRGVDAQLIEAGESLGLSRWGLVRHVVLPGALPGAMTGLRYSL 208 Query: 515 GGAWNASIVSE 525 G AW A + +E Sbjct: 209 GIAWLALVFAE 219 >gi|258646314|ref|ZP_05733783.1| spermidine/putrescine transport system permease protein PotC [Dialister invisus DSM 15470] gi|260403705|gb|EEW97252.1| spermidine/putrescine transport system permease protein PotC [Dialister invisus DSM 15470] Length = 272 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%) Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 +++ V A +++E A + W+ +RYI LP I P GA+ A + + I Sbjct: 145 FVVITVGARLDGLKQEYEEAAGDLYARPWQCFRYITLPLIMPGITAGALIAFTLSIDDFI 204 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 +S A+ + +T L YI ++G PE+ Sbjct: 205 ISFFAAGPN----STTLPLYIYAMVKRGISPEI 233 >gi|170693280|ref|ZP_02884440.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gi|170141810|gb|EDT09978.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 263 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 19/203 (9%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKV 131 L +S+L A L A S + L P++ QSIP + VV+F L+P ++ Sbjct: 69 LGGFALSVLIGVPIAMLVAASPLIESYLYPLVVFSQSIPKVAIAPLFVVWFGFGLFP-RI 127 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + A L F + S V M F ++ +DL ++++S S + F+ + +P ++P Sbjct: 128 LVAFLLGFFPVVVSTV--MGFK------SVEKDLTDLAKSMGSSPVKTFFKISLPHALPS 179 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM--LTML 249 + +M +S++ +A VVG+ V G+G + A D I A+ L+++ Sbjct: 180 IFASMKVSIT------LAVVGAVVGEFVGANSGLGFVLQRANGNFDQPLIFSALVVLSVI 233 Query: 250 G-VIFLYDQLLFRPMIVWSNKFR 271 G ++F+ +L R I W R Sbjct: 234 GALLFVAIDMLERIAIPWHASHR 256 >gi|168186541|ref|ZP_02621176.1| putative taurine ABC transporter, permease protein [Clostridium botulinum C str. Eklund] gi|169295451|gb|EDS77584.1| putative taurine ABC transporter, permease protein [Clostridium botulinum C str. Eklund] Length = 253 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 33/161 (20%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV++ ++ + ++ + +G++ G ++ + PF + A P V ++++ V + N Sbjct: 64 RVLIGLLFSIVLGVILGLFSGMNVYLEEILMPFISSIKATP--VMSIIILALVWFKASNV 121 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 +++ ++L+ F I N + G + + ++A+ +++ + I +P I Y V+ Sbjct: 122 SIFTTILICFPI---IYTNAVEGIKSTDLNLLQMANVYNVKKIYIVKDIYIPTIKSYVVS 178 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 G + G A+ S+ SEV S + L + TE+ Sbjct: 179 GILMCLGLAFKVSVASEVLSTPKYSIGVNILNSKAMLETEE 219 >gi|121535484|ref|ZP_01667293.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] gi|121305903|gb|EAX46836.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] Length = 268 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 26/168 (15%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV ++A+II +P+GI +G + ++P L PA+ F PL + Sbjct: 77 RVTGGFLLAAIIGVPLGILMGSLKVFEAFVEPLLGFLRYMPASAFIPLFI---------- 126 Query: 449 NLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILP 500 LWL + ++ FGT + + V+ + A + ++ +WR +ILP Sbjct: 127 -LWLGIGESEKVAVIFFGTFFQLTLMVMDVTKNVSQALIDTAYTLGVSKRGVFWR-VILP 184 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 P V G AW +V+E+ + ++GLG I +S Sbjct: 185 ASMPGIVDTLRITFGWAWTYLVVAEIVA------ASSGLGHMIMQSQR 226 >gi|71278998|ref|YP_271573.1| amino acid ABC transporter permease [Colwellia psychrerythraea 34H] gi|71144738|gb|AAZ25211.1| amino acid ABC transporter, permease protein [Colwellia psychrerythraea 34H] Length = 346 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 34/186 (18%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 YA +T + IS+L +K R ++PILD++Q++P Sbjct: 150 SYAVQTMAIIFVCTGISVLLGVPIGIAMSKYDRFQKGVIPILDMLQTLP----------S 199 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ----------SLCNIPRDLEEVSRSF 172 F+ L P L +F++ S+++ + MY + + +D+ E + +F Sbjct: 200 FVYLIP-------LIFLFSVTESKLYGIAIIMYAIVPVIRLTDLGIRLVDKDIIEGANAF 252 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 +S QK + + +P ++P + M+G ++ S +VV +++ PG+G + Sbjct: 253 GMSARQKLFNVELPLALPNI-------MAGVNQTIMMSLAMVVIASLVSAPGLGVLVLRG 305 Query: 233 IKEQDL 238 I +L Sbjct: 306 INNLEL 311 >gi|257388311|ref|YP_003178084.1| binding-protein-dependent transporters inner membrane component [Halomicrobium mukohataei DSM 12286] gi|257170618|gb|ACV48377.1| binding-protein-dependent transport systems inner membrane component [Halomicrobium mukohataei DSM 12286] Length = 329 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN----MTFSMYQSLCNIPRDLE 166 P +GFLT + L P + +A F I + +W M + L +I R L Sbjct: 171 PSIGFLTPPLADLGLLAPTNTLNDPASATFVIIVADIWKTSAFMALLILAGLQSIDRGLY 230 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMP 190 +V++ S WQ+F ++ P +P Sbjct: 231 DVAKVAGASKWQQFKHITFPLILP 254 >gi|24379567|ref|NP_721522.1| putative phosphate ABC transporter, permease protein [Streptococcus mutans UA159] gi|290580432|ref|YP_003484824.1| putative phosphate ABC transporter permease [Streptococcus mutans NN2025] gi|24377512|gb|AAN58828.1|AE014950_11 putative phosphate ABC transporter, permease protein [Streptococcus mutans UA159] gi|254997331|dbj|BAH87932.1| putative phosphate ABC transporter permease protein [Streptococcus mutans NN2025] Length = 295 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 14/142 (9%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIP-----ILGFLTFTVVYFMNLYPGKVIGAELAAI 139 +Y + AK RL + ++I+ S+P + G+L F VV F Y +I LA Sbjct: 85 IYLSEYAKKGRLTDFVRTCIEILSSLPSVVVGLFGYLIF-VVQFQ--YGFSIISGALA-- 139 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 +F + MT ++ SL N+ E + +S W+ ++ +P ++PG+V ++ Sbjct: 140 LTVF--NLPQMTRNIEDSLRNVHHTQREAGLALGISRWETVLHVVIPEALPGIVTGIV-- 195 Query: 200 MSGGWFFVVASEMIVVGDTVIP 221 ++ G F A+ +I P Sbjct: 196 LASGRIFGEAAALIYTAGQSAP 217 >gi|315039177|ref|YP_004032745.1| maltose ABC transporter permease protein [Lactobacillus amylovorus GRL 1112] gi|325957649|ref|YP_004293061.1| maltose ABC transporter permease [Lactobacillus acidophilus 30SC] gi|312277310|gb|ADQ59950.1| maltose ABC transporter permease protein [Lactobacillus amylovorus GRL 1112] gi|325334214|gb|ADZ08122.1| maltose ABC transporter permease protein [Lactobacillus acidophilus 30SC] gi|327184293|gb|AEA32740.1| maltose ABC transporter permease [Lactobacillus amylovorus GRL 1118] Length = 285 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 17/158 (10%) Query: 56 LDVHSLPQYA-----SRTTLRMLSAMVISLLFTFVYATLAAKSR-RLGMVLVPILDIMQS 109 + + + PQY T + L++M++S T A + ++ R R + I ++ Sbjct: 60 IGIFTNPQYPFGNWIINTLIVSLASMIVSTFLTISVAYVLSRLRFRFRKPFLQIALVLGM 119 Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS---LCNIPRDLE 166 P GF++ +Y++ + G + +F +F V Y + IPR ++ Sbjct: 120 FP--GFMSMIALYYI------LKGLNMLNLFGLFLVYVGGAGLGFYVAKGFFDTIPRSID 171 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 E + + WQ F ++G+P S P +V+ + + W Sbjct: 172 EAAEIDGATKWQVFIHIGLPLSKPMIVYTALTAFIAPW 209 >gi|295095970|emb|CBK85060.1| ABC-type proline/glycine betaine transport systems, permease component [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 215 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P+LG T ++ F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPVLGIATIVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++P L E R ++ WQ+ ++ +P ++P Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|254699720|ref|ZP_05161548.1| Binding-protein-dependent transport systems inner membrane component [Brucella suis bv. 5 str. 513] gi|261750186|ref|ZP_05993895.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 5 str. 513] gi|261739939|gb|EEY27865.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 5 str. 513] Length = 272 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF----MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 LVP++ + IP + L V++F M+ Y + F FT V + Y Sbjct: 115 LVPLVAALFPIPKIALLPLFVIWFGIDEMSKY--------MLIAFGTFTPTV----VATY 162 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ N+ R L + +SF LS W + +P + P ++ + +S+S +VA+EM+ Sbjct: 163 GAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSGLRVSISIAIILLVAAEML-- 220 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAIL--YAMLTMLGVI 252 G G+GSYI A DL + A+L+++G+I Sbjct: 221 GAQY----GVGSYILEAGSLYDLEKLFAGVAILSVMGLI 255 >gi|162453315|ref|YP_001615682.1| trehalose/maltose transport system, permease protein [Sorangium cellulosum 'So ce 56'] gi|161163897|emb|CAN95202.1| Trehalose/maltose transport system, permease protein [Sorangium cellulosum 'So ce 56'] Length = 292 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 12/116 (10%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R L + +V + I I +LG L F ++ F+NLY +L A+ I T ++ + Sbjct: 113 RGRSLVLYVVLGMTIFPQIAVLGAL-FQMINFLNLY------NQLPAL--ILTYLIFTLP 163 Query: 152 FSMY---QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 F+++ + IPR++EE + + WQ F + +P S+PG+ +++ W Sbjct: 164 FTVWVLTGFMKAIPREIEEAAYVDGATHWQVFTQIMLPLSVPGMATTGILAFIAAW 219 >gi|157145837|ref|YP_001453156.1| hypothetical protein CKO_01588 [Citrobacter koseri ATCC BAA-895] gi|157083042|gb|ABV12720.1| hypothetical protein CKO_01588 [Citrobacter koseri ATCC BAA-895] Length = 215 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G+ IGA L AI A+F + + + + +L ++P L E R ++ WQ+ ++ +P + Sbjct: 80 GQGIGA-LPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFWQRLRWVEIPMA 138 Query: 189 MP 190 +P Sbjct: 139 LP 140 >gi|281357438|ref|ZP_06243926.1| binding-protein-dependent transport systems inner membrane component [Victivallis vadensis ATCC BAA-548] gi|281316041|gb|EFB00067.1| binding-protein-dependent transport systems inner membrane component [Victivallis vadensis ATCC BAA-548] Length = 280 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 25/43 (58%) Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 TF M Q + NIP+ L+E + + WQ +W + +P + P LV Sbjct: 158 TFLMRQFMMNIPKSLDEAAEIDGATKWQLYWDVVLPLARPALV 200 >gi|146338492|ref|YP_001203540.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146191298|emb|CAL75303.1| putative ABC transporter; permease protein [Bradyrhizobium sp. ORS278] Length = 288 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 31/65 (47%) Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W I N +G A N + V ++ + G + R+I++P FP +TG AW Sbjct: 163 WAIALNTHSGFRAVSNTLRMVGLNYGLRGLKLVRFILIPAAFPAILTGLKVGWAFAWRTL 222 Query: 522 IVSEV 526 I +E+ Sbjct: 223 IAAEL 227 >gi|303235143|ref|ZP_07321763.1| ABC transporter, permease protein [Finegoldia magna BVS033A4] gi|302493735|gb|EFL53521.1| ABC transporter, permease protein [Finegoldia magna BVS033A4] Length = 207 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 4/134 (2%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ITM RVV +IA ++ +P+G+ +G + L P + PL + + Sbjct: 74 ITMSRVVKGWLIAVLVGVPIGMAMGLSKIFEGILGGVVNSLRQIPMMAWVPLSIIWLGIG 133 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 P L++ + + ++ N G ++ D+ A S + + +++P P Sbjct: 134 D-GPTLFM---IALNGVFQVIMNTSTGVASIDKDYYNAAKSMGASKASTFVNVVVPASMP 189 Query: 505 YYVTGAITACGGAW 518 + + GA A G W Sbjct: 190 HILVGARLAIGAGW 203 >gi|301170097|emb|CBW29701.1| polyamine transporter subunit [Haemophilus influenzae 10810] Length = 286 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y ++ + L E +R + +Q+F+ + +P Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDHRLLEAARDLGANTFQRFFRVILPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG++ ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241 >gi|294677765|ref|YP_003578380.1| taurine ABC transporter permease TauC [Rhodobacter capsulatus SB 1003] gi|294476585|gb|ADE85973.1| taurine ABC transporter, permease protein TauC [Rhodobacter capsulatus SB 1003] Length = 417 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 8/114 (7%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PI++ M+ +P L + ++++ GK++ +F + +W M + + + Sbjct: 258 PIVEFMRPVPPLALIPLIIIWWGIWETGKIV--------LLFLAALWIMVIAARSGVAGV 309 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + S S WQ ++ +P S+P L ++M W VVA+E++ Sbjct: 310 RLSKVHAAYSLGASKWQVLTHVIIPNSLPDLFIGARVAMGVCWGTVVAAELVAA 363 >gi|238059728|ref|ZP_04604437.1| ABC transporter [Micromonospora sp. ATCC 39149] gi|237881539|gb|EEP70367.1| ABC transporter [Micromonospora sp. ATCC 39149] Length = 459 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 18/74 (24%), Positives = 38/74 (51%) Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 + I + VW + + + + + E + SFR+S W++ W+L +P + P ++ + Sbjct: 325 VVVIVSGAVWPILLNTIEGVRATDSVMTETAHSFRVSWWERLWFLVLPAASPRIMAGVRQ 384 Query: 199 SMSGGWFFVVASEM 212 ++S +V SEM Sbjct: 385 ALSVALILMVISEM 398 >gi|163856869|ref|YP_001631167.1| inner membrane component of binding-protein-dependent transport system [Bordetella petrii DSM 12804] gi|163260597|emb|CAP42899.1| probable inner membrane component of binding-protein-dependent transport system [Bordetella petrii] Length = 257 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%) Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE-VASWGHIHLRTTGLGAYIAEST 547 T W + + LP + P +TGA A G AW A I +E + +G GLG +A S Sbjct: 164 TPWGLIKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFGK------GLGRSLAYSG 217 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 E V+ +L++ +++F+ L Sbjct: 218 EIADMTGVMANILVIAILAALIDQFVLENL 247 >gi|158425998|ref|YP_001527290.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332887|dbj|BAF90372.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 270 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + +RV IA+++ + +G+ IG+ I I+P Q+L P + PL + Sbjct: 72 STWRVAAGFGIATVMAVFLGVAIGWSRFIEVTIEPTLQMLRPIPPVSWIPLAIIWFGIAD 131 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P ++L L G + IL N I G + + + R+I+LP P Sbjct: 132 -KPAIFLVFL---GAFFPILLNTIHGVKTVDRNLIRAGAMVGGGQRQLLRFIVLPAAMPS 187 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 G G AW ++ +E+ + Sbjct: 188 IFAGLRIGIGSAWMLTVTAEMVA 210 >gi|148825886|ref|YP_001290639.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae PittEE] gi|229846802|ref|ZP_04466909.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 7P49H1] gi|148716046|gb|ABQ98256.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae PittEE] gi|229810291|gb|EEP46010.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 7P49H1] gi|309973028|gb|ADO96229.1| Spermidine/putrescine ABC transporter, permease protein [Haemophilus influenzae R2846] Length = 286 Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y ++ + L E +R + +Q+F+ + +P Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDHRLLEAARDLGANTFQRFFRVILPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG++ ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241 >gi|325685676|gb|EGD27756.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 220 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+ R L ++ I +++Q+IP L L+ ++ G +G I +F + + Sbjct: 51 ARHRTLSNTVIGIANVIQTIPSLAMLSIIML-------GLGLGVN-TVIVTVFLYSLLPI 102 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + Y + N+ ++L + ++ ++ WQ + + +P SM Sbjct: 103 IKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSM 141 >gi|227524881|ref|ZP_03954930.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, binding and permease protein [Lactobacillus hilgardii ATCC 8290] gi|227087952|gb|EEI23264.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, binding and permease protein [Lactobacillus hilgardii ATCC 8290] Length = 508 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 17/183 (9%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L +++I+++ A A R + + IMQ+IP L L L P I Sbjct: 28 LISLIIAIVIAIPLAVYARNHRVFAHIALGFTSIMQTIPSLAILGI-------LIPIVGI 80 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G++ AI A+ + + + Y +L I +L E + F L+ WQ+ + + +P S + Sbjct: 81 GSK-PAIIALVIYGILPIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSKDSI 139 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML--TMLG 250 + + S ++ + + +I G+G++I L I + L + +L Sbjct: 140 LTGIKTST----VLIIGTATLAA---LIGAGGLGTFILLGIDRSNTALTLTGAIGSALLA 192 Query: 251 VIF 253 V+F Sbjct: 193 VVF 195 >gi|302037731|ref|YP_003798053.1| phosphate ABC transporter auxiliary and permease protein [Candidatus Nitrospira defluvii] gi|300605795|emb|CBK42128.1| Phosphate ABC transporter, auxiliary and permease protein (modular protein) [Candidatus Nitrospira defluvii] Length = 549 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 32/68 (47%) Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 LW SL + T ++ G SA P DF+E + T + R++I+P P +TG Sbjct: 390 LWASLTLALLTVPVVIVATEEGLSAVPRDFREGSLGLGATKFETLRHVIIPCALPGILTG 449 Query: 510 AITACGGA 517 I A A Sbjct: 450 LILAMARA 457 >gi|291561237|emb|CBL40036.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [butyrate-producing bacterium SS3/4] Length = 257 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%) Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P + ++P QL+ P F ++++ + N ++++S L+++ I N AG Sbjct: 87 PIVDEFLEPPVQLMKTVPVASF--VILALIWTGSKNLSVFISFLVVYPM---IHVNTKAG 141 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 + + E+A FH+ R YI ++PY + TA G + + I +EV Sbjct: 142 LISADRELLEMAEVFHVPFIRRAFYIYRTALYPYLKSACRTALGMGFKSGIAAEVIG--- 198 Query: 532 IHLRTTGLGAYIAE 545 + + G G Y+A+ Sbjct: 199 VPDGSIGEGLYLAK 212 >gi|271963355|ref|YP_003337551.1| ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270506530|gb|ACZ84808.1| ABC-type transporter, permease protein [Streptosporangium roseum DSM 43021] Length = 262 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 27/191 (14%) Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I +P G +G P + ++P + L P+ PL ++ S ++ ++L+ ++ Sbjct: 78 MIAVPAGFVLGTLPRAETALRPVLEFLRPIPSLALIPLALALFSDRF---DMKITLI-VY 133 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWR-WWRYIILPGIFPYYVTGAITACGGA 517 W +L N + G KE SF WR + LP P+ TG A A Sbjct: 134 AATWPVLMNTLYGLKDVDPLAKETLRSFGFGPLSVLWR-VSLPSTAPFVATGVRLASAIA 192 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV------------VLGVLIMCCF 565 +I E+ + G + G+G ++ E G P+ V+G++ F Sbjct: 193 LIVAISVELLAGG-----SDGIGVFL---IEVGGSPDAMVYIIATAIWAGVIGLVTDSLF 244 Query: 566 VLALNR-FLWH 575 VLA R F WH Sbjct: 245 VLAERRIFRWH 255 >gi|227511900|ref|ZP_03941949.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, binding and permease protein [Lactobacillus buchneri ATCC 11577] gi|227084876|gb|EEI20188.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, binding and permease protein [Lactobacillus buchneri ATCC 11577] Length = 512 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 21/180 (11%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L +++I+++ A A R + + IMQ+IP L L L P I Sbjct: 28 LISLIIAIVIAIPLAVYARNHRVFAHIALGFTSIMQTIPSLAILGI-------LIPIVGI 80 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G++ AI A+ + + + Y +L I +L E + F L+ WQ+ + + +P S + Sbjct: 81 GSK-PAIIALVIYGILPIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSKDSI 139 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + + S ++ + + +I G+G++I L I + LT+ G I Sbjct: 140 LTGIKTST----VLIIGTATLAA---LIGAGGLGTFILLGIDRSN------TALTLTGAI 186 >gi|254511123|ref|ZP_05123190.1| glycine betaine/proline ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] gi|221534834|gb|EEE37822.1| glycine betaine/proline ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] Length = 687 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 15/137 (10%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ D++Q+IP+ FL ++ F IG E +A AI + M L N Sbjct: 532 PVCDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAICAYAIVPMIRYTRHGLVNT 583 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P ++ E + S + WQ + P++ P ++ + ++ + A M+V+ +I Sbjct: 584 PEEMMEAAISSGATEWQIMRDVRAPYAAPTILLGLNQTI------LYAFAMLVIA-ALIG 636 Query: 222 LPGIGSYIALAIKEQDL 238 G+G I LA+ + D+ Sbjct: 637 TTGLGQSIYLALGQADV 653 >gi|303327854|ref|ZP_07358294.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio sp. 3_1_syn3] gi|302862215|gb|EFL85149.1| phosphate ABC transporter, permease protein PstC [Desulfovibrio sp. 3_1_syn3] Length = 296 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 21/195 (10%) Query: 81 LFTFVYATLAAKS--RRLGMVLVPILDIMQSIP--ILGFLTFTVVY-FMNLYPGKVIGAE 135 + T VY T A RR ++ P ++++ ++P +LGFL V+ + + G G Sbjct: 89 VLTAVYLTEIAHPGVRR---IIKPFVELLAALPSVVLGFLGMVVLAPVIQDWLGAATGLN 145 Query: 136 L-AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 L A + V + +L ++PRDL E S + + WQ + +P ++ G+ Sbjct: 146 LLNASLVLALMSVPTICSVSEDALYSVPRDLREASLALGATRWQTTVRVAIPAALSGIGT 205 Query: 195 NMMMSMSGGWFFVVASEMIVVG---------DTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +M+ MS + M+ G D V P+P + IA + E + Y Sbjct: 206 AVMLGMSRAIGETMVVLMVAGGAGLIPTSLLDPVRPMP---ASIAAEMAEAPFRSDHYHA 262 Query: 246 LTMLGVIFLYDQLLF 260 L +G++ + L F Sbjct: 263 LFAIGIVLFFLTLAF 277 >gi|291087046|ref|ZP_06345233.2| putative ABC transporter, permease protein [Clostridium sp. M62/1] gi|291076292|gb|EFE13656.1| putative ABC transporter, permease protein [Clostridium sp. M62/1] Length = 270 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 F P + + P L+ + P F ++++ + N ++++S +++F + + + Sbjct: 104 FLPVLKEFLAPAVLLMKSIPVASF--VILALIWIGSENLSVFISFMVVFPMIYESTLSGL 161 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 +GA A E+A F I+G R +R I LP + PY A G + + +EV Sbjct: 162 SGADA---QLLEMACVFRISGLRKFRAIYLPALLPYLAGSCRFALGMGIKSGVAAEV 215 >gi|184200966|ref|YP_001855173.1| putative ABC transporter permease protein [Kocuria rhizophila DC2201] gi|183581196|dbj|BAG29667.1| putative ABC transporter permease protein [Kocuria rhizophila DC2201] Length = 293 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 17/197 (8%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 QD + +W R++ +++A+ I +P+G+ IG + P Q L + Sbjct: 100 QDAVTSLW-------RLLGGLLLATAIGVPLGLVIGSWQRVRWASAPVVQFLRMVSPLSW 152 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ V+ + L+ W I N AG +A VA + T + Sbjct: 153 APVAVALFGVGSAP----VVFLVAAAAVWPITLNTAAGVAALDPAHLRVARTLGATPFER 208 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 ++ P I PY +TG A G +W + +E+ +TGLG I + ++ ++ Sbjct: 209 LLTVVFPSIRPYVMTGVRLALGISWVVLVPAEMLG------VSTGLGYEILNARDRLAYD 262 Query: 554 EVVLGVLIMCCFVLALN 570 E+++ +L++ +AL+ Sbjct: 263 EMLVVILVIGLLGIALD 279 >gi|320007752|gb|ADW02602.1| binding-protein-dependent transport systems inner membrane component [Streptomyces flavogriseus ATCC 33331] Length = 292 Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust. Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 10/169 (5%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G W S+ + + +L VIW ++ R + ++A I P+G+ + + + Sbjct: 71 GAVWDSL---TDMWVQGTLLEVIW---TSVSRGLFGFVMAVAIGTPLGLLVARVKVVRAA 124 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P L + P+ + V V + LN ++ +++++ G + +++G P Sbjct: 125 IGPILSGLQSLPSVAW---VAPAVIWLGLNDSMMYAVILL-GAVPSVANGLVSGVDQVPP 180 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 F + TG R +I+LP P Y+ G +W + + +E+ Sbjct: 181 LFLRAGRTIGATGLRGTIHIVLPAALPGYLAGLKQGWAFSWRSLMAAEI 229 >gi|253575510|ref|ZP_04852847.1| spermidine/putrescine ABC transporter permease [Paenibacillus sp. oral taxon 786 str. D14] gi|251845157|gb|EES73168.1| spermidine/putrescine ABC transporter permease [Paenibacillus sp. oral taxon 786 str. D14] Length = 268 Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%) Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 Y+ V S +E A + W+ +RY+ LP I P ++GA+ A + + + Sbjct: 144 YVYVVVTTRLSGMGGQLEEAAQDLGASSWQTFRYVTLPQIAPGIISGALIAFTLSLDDFM 203 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 VS S + +T L YI ++G PE+ Sbjct: 204 VSFFVSGPN----STTLPIYIYGQVKRGISPEI 232 >gi|239631246|ref|ZP_04674277.1| maltose ABC transporter permease protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066002|ref|YP_003788025.1| maltose ABC transporter permease [Lactobacillus casei str. Zhang] gi|239525711|gb|EEQ64712.1| maltose ABC transporter permease protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438409|gb|ADK18175.1| maltose ABC transporter permease protein [Lactobacillus casei str. Zhang] Length = 285 Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 31/55 (56%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 IPR ++E + + WQ F ++G+P S P +V+ +M+ G W + S +I+ Sbjct: 165 TIPRAIDEAAEIDGATKWQVFTHIGLPMSRPIVVYTALMAFIGPWIDFIFSGIIL 219 >gi|84686260|ref|ZP_01014155.1| Binding-protein-dependent transport systems inner membrane component [Maritimibacter alkaliphilus HTCC2654] gi|84665787|gb|EAQ12262.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium HTCC2654] Length = 270 Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 MT + Q + +IP + +++ S W + +P +P L+ N+ +S+ W F++A Sbjct: 152 MTRDLSQRVLDIPHEQIVKAQTLGASTWVIAARVALPQILPRLIANVRLSLGSAWLFLIA 211 Query: 210 SEMI 213 +E + Sbjct: 212 AEAV 215 >gi|217421757|ref|ZP_03453261.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217395499|gb|EEC35517.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 313 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 141 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 192 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 193 TFAGFQAVPATLRMVGRNYGLTGLRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 252 >gi|191636887|ref|YP_001986053.1| Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein [Lactobacillus casei BL23] gi|227533459|ref|ZP_03963508.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630873|ref|ZP_04673904.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065197|ref|YP_003787220.1| glycine betaine/carnitine/choline ABC transporter ATP-binding protein [Lactobacillus casei str. Zhang] gi|190711189|emb|CAQ65195.1| Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein [Lactobacillus casei BL23] gi|227188909|gb|EEI68976.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527156|gb|EEQ66157.1| glycine betaine/carnitine/choline ABC transporter [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300437604|gb|ADK17370.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding protein [Lactobacillus casei str. Zhang] gi|327380918|gb|AEA52394.1| Proline/glycine betaine ABC transporter permease [Lactobacillus casei LC2W] gi|327384090|gb|AEA55564.1| Proline/glycine betaine ABC transporter permease [Lactobacillus casei BD-II] Length = 220 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 21/100 (21%), Positives = 48/100 (48%), Gaps = 8/100 (8%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+ R L ++ I +++Q+IP L L+ ++ G +G I +F + + Sbjct: 51 ARHRTLSSTVIGIANVIQTIPSLAMLSIIML-------GLGLGVN-TVIVTVFLYSLLPI 102 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + Y + N+ ++L + ++ ++ WQ + + +P SM Sbjct: 103 IKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSMS 142 >gi|329123530|ref|ZP_08252093.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus aegyptius ATCC 11116] gi|327470346|gb|EGF15804.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus aegyptius ATCC 11116] Length = 286 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y ++ + L E +R + +Q+F+ + +P Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG++ ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241 >gi|300769223|ref|ZP_07079111.1| sugar ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493252|gb|EFK28432.1| sugar ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 280 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%) Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + FV+ + +VL ++ ++ I F T ++ +N Y VI L + F Sbjct: 99 YAFVFLEFKYRDALFYLVLATMMLPFEAEVIPNFHTVRAMHLLNHYAVMVI-PFLTSAFG 157 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF + Q+ IPRDL+E + LS WQ + + +P+S L+ S Sbjct: 158 IFM---------LRQAFLQIPRDLKEAADVDGLSHWQFYCRVALPYSRISLLTLAAYSFL 208 Query: 202 GGW 204 G W Sbjct: 209 GSW 211 >gi|227894585|ref|ZP_04012390.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227863576|gb|EEJ70997.1| phosphate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 331 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 5/133 (3%) Query: 93 SRRLGMVLVPILDIMQSIP--ILGFLTFTVVY--FMNLYPGKVIGAELAAIFAIFTSQVW 148 S++ L + +++ IP + GFL T++ NL+ G G LAA +F + Sbjct: 142 SKKGASFLQSVTELLVGIPSVVYGFLGLTIIVPVIRNLFGGTGFGI-LAATLVLFVMVLP 200 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +T SL +P + S + R + WQ +++ + + P ++ ++ M+ + + Sbjct: 201 TITSLTVDSLKAVPSHFRKASMALRATHWQTIYHVVLRVATPRILTAVIFGMARAFGEAL 260 Query: 209 ASEMIVVGDTVIP 221 A +M++ ++P Sbjct: 261 AVQMVIGNAVLMP 273 >gi|213583938|ref|ZP_03365764.1| putative permease transmembrane component [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 210 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 8/122 (6%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154 +L+++Q+IP + G L + + +P G A+ A+ + + + Sbjct: 40 VLNVIQTIPSVALFGLLIAPLAGLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGV 99 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 L +PRD+ E +R+ +S Q+F ++ +P ++P + ++ + M VA+ +I Sbjct: 100 VAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIG 159 Query: 215 VG 216 G Sbjct: 160 AG 161 >gi|209547288|ref|YP_002279206.1| betaine/proline ABC transporter permease [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538532|gb|ACI58466.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 283 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Query: 65 ASRTTLRMLS-AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIP 111 AS TL ++S A+VIS+L F L ++ + L V+ PILD+MQ++P Sbjct: 90 ASMQTLALVSVAVVISVLIAFPIGVLCSRHKTLEAVVRPILDVMQTVP 137 >gi|191637927|ref|YP_001987093.1| Maltose ABC transporter, permease component [Lactobacillus casei BL23] gi|145309105|gb|ABP57781.1| MalG1 [Lactobacillus casei BL23] gi|190712229|emb|CAQ66235.1| Maltose ABC transporter, permease component [Lactobacillus casei BL23] gi|327381996|gb|AEA53472.1| Binding-protein-dependent transport systems inner membrane component [Lactobacillus casei LC2W] gi|327385154|gb|AEA56628.1| Binding-protein-dependent transport systems inner membrane component [Lactobacillus casei BD-II] Length = 285 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 31/55 (56%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 IPR ++E + + WQ F ++G+P S P +V+ +M+ G W + S +I+ Sbjct: 165 TIPRAIDEAAEIDGATKWQVFTHIGLPMSRPIVVYTALMAFIGPWIDFIFSGIIL 219 >gi|163844631|ref|YP_001622286.1| hypothetical protein BSUIS_B0468 [Brucella suis ATCC 23445] gi|163675354|gb|ABY39464.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 272 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 13/181 (7%) Query: 393 LIIIASI---IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 LII AS+ + I +G+ IG ++ + I P L P PL V ++ Sbjct: 87 LIIGASLGIAVGISLGVMIGLFSYVRAGIVPLVAALFPIPKIALLPLFVIWFGIDEMSKY 146 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + L+ FGT + + SF ++ W R I+LPG FP ++G Sbjct: 147 M----LIAFGTFTPTVVATYGAVDNVDRSLIRMGQSFGLSWWSIVRKIVLPGAFPAILSG 202 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 + + +I+ VA+ + G+G+YI E+ ++ GV I+ L + Sbjct: 203 LRVSI----SIAIILLVAA--EMLGAQYGVGSYILEAGSLYDLEKLFAGVAILSVMGLIV 256 Query: 570 N 570 N Sbjct: 257 N 257 >gi|146311575|ref|YP_001176649.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] gi|145318451|gb|ABP60598.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] Length = 215 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 109 SIPILGFLTF-----TVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P+LG T ++ F + P G+ IGA L AI A+F + + + + +L Sbjct: 50 ATPVLGIATIVLTIPSIALFGLMIPLFSLIGQGIGA-LPAITAVFLYSLLPIVRNTHTAL 108 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++P L E R ++ WQ+ ++ +P ++P Sbjct: 109 DSLPPGLREAGRGIGMTFWQRLRWVEIPMALP 140 >gi|83643070|ref|YP_431505.1| proline/glycine betaine ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83631113|gb|ABC27080.1| ABC-type proline/glycine betaine transport system, permease component [Hahella chejuensis KCTC 2396] Length = 373 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 11/114 (9%) Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPIL---GFLTFTVVYFMNLYP-GKVIGAE----L 136 ++AT + K+RR L +L ++Q+IP L G L + Y N + + IG + Sbjct: 190 IWATRSEKARR---GLFGVLSVLQTIPSLALFGLLIAPLSYLANEFEWLRAIGVQGIGFT 246 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A+ A+ + MT + Y +L P + E +R +S Q F + +P + P Sbjct: 247 PALIALIGYSLLPMTRNAYVALTGTPEPVLEAARGMGMSESQVFLQVRLPLAAP 300 >gi|308174288|ref|YP_003920993.1| phosphate ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607152|emb|CBI43523.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] gi|328554234|gb|AEB24726.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens TA208] gi|328912631|gb|AEB64227.1| phosphate ABC transporter (permease) [Bacillus amyloliquefaciens LL3] Length = 309 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 99 VLVPILDIMQSIP--ILGFLTFTV-VYFMNLYPGKVIGAELAAIFAIFTSQVW-NMTFSM 154 VL P+++++ IP + GF+ TV V F+ + G L A + + + +T Sbjct: 125 VLQPVIELLVGIPSVVYGFIGLTVLVPFIGSFKSSGTGHSLLAGTIVLSVMILPTITSIS 184 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 +L ++P+ L + S + + WQ + +P + P L+ +++ M+ + +A +M++ Sbjct: 185 ADALASLPKHLRDGSYALGATRWQTIRKVLIPAAFPTLLTAVVLGMARAFGEALAVQMVI 244 Query: 215 VGDTVIP 221 ++P Sbjct: 245 GNTKLLP 251 >gi|296454549|ref|YP_003661692.1| sugar ABC transporter permease [Bifidobacterium longum subsp. longum JDM301] gi|296183980|gb|ADH00862.1| ABC-type sugar transport system permease component [Bifidobacterium longum subsp. longum JDM301] Length = 301 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R+ MV V + + I F+ + + +N Y G + LA I + +WNM Sbjct: 128 RGRKPIMVFVLAIQMTSGGIIPQFIIYNQLGLLNKYSGLI----LAYIAMVLPFAIWNM- 182 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 NIP+D+ E + + WQ W + P + PG+V + + W Sbjct: 183 ---RGFFLNIPKDIFESAAVEGANDWQILWKITFPLAAPGIVSTSVFAFINAW 232 >gi|300088671|ref|YP_003759193.1| binding-protein-dependent transporter inner membrane component [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528404|gb|ADJ26872.1| binding-protein-dependent transport systems inner membrane component [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 267 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 11/180 (6%) Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G G+ + + P Q L A PA + P ++ + P + + + IF T + Sbjct: 91 LGGLTGYTRWVEKILDPTVQGLRAVPAVAWIPFLILTLGIAD-APKIAMIAIAIFFTAYV 149 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 N AG + E+A ++ ++ R II+P P G A G AW ++ Sbjct: 150 ---NTFAGVRSTDQKLIELARAYRLSRAVVIRRIIIPSAKPQIFVGLRLAAGIAWIVAVF 206 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 SE I + +GLG + + G P+ + ++++ L L L TR Sbjct: 207 SE------ILIGNSGLGVLLNDGRTLGR-PDQTIALMLVLATAGKLTDGLIRLAELRATR 259 >gi|294628454|ref|ZP_06707014.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptomyces sp. e14] gi|292831787|gb|EFF90136.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptomyces sp. e14] Length = 871 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 34/52 (65%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 +L A +I+L+ + AA+S R+G V+ P+LD MQ++P + +L +++F Sbjct: 94 VLVATLIALVVSVPVGIWAARSDRVGAVVRPVLDFMQTLPAMIYLIPAILFF 145 >gi|159043922|ref|YP_001532716.1| binding-protein-dependent transport systems inner membrane component [Dinoroseobacter shibae DFL 12] gi|157911682|gb|ABV93115.1| binding-protein-dependent transport systems inner membrane component [Dinoroseobacter shibae DFL 12] Length = 303 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 17/183 (9%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP----QYASR 67 +R + P IF + +LV+ + + L+ + +P V V I +SLP + Sbjct: 53 ARTLVPVIFGVT--ILVLWEVTVRLYAVPGVILPPPSVIGVRIA---NSLPILWEDFVQT 107 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 LS + + F A L + L L+P+ + M ++PI+G V++F + Sbjct: 108 FVKGALSGYAMGAVAAFAVAILVDRYDFLRRGLLPVGNFMAALPIIGTAPILVMWFGFDW 167 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K + F I + V + +S + RDL E ++ + WQ YL +P Sbjct: 168 ESKAAVVVVMVFFPILVNTVEGL-----RSADRMQRDLME---TYAATNWQSLLYLRLPA 219 Query: 188 SMP 190 +MP Sbjct: 220 AMP 222 >gi|116249415|ref|YP_765256.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115254065|emb|CAK12462.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 211 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 26/178 (14%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL- 454 IA +I + VGIW RP + I F +L A P+ F L++ + L+ Sbjct: 29 IALVISLIVGIWAARRPRSFAVIIIFTGILFAVPSLALFALLIPIMGIGAAPAITGLAAY 88 Query: 455 -LMIFGTQWYILFNVIAGASAFPNDFKEVASSF-HITGWRWWRYIILPGIFPYYVTG--- 509 LMI ++ N+ G A P D E A + T R W + LP PY V G Sbjct: 89 SLMI------LIRNIGMGFQAIPRDILEAADGMGYGTARRIWE-VELPLAMPYIVGGIRI 141 Query: 510 -AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 +T G ++ VA++ + GLG I E ++ FPE ++ ++ F+ Sbjct: 142 AMVTVIG-------IATVAAY----INAGGLGVIIFEGIDQ-RFPEKIIAGGLLTSFL 187 >gi|86358895|ref|YP_470787.1| nitrate/sulfonate ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86282997|gb|ABC92060.1| probable nitrate/sulfonate ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 375 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 VI L FV A LA + L L+PI +++ ++PI+G V++F + K + Sbjct: 189 VIGCLSGFVVAVLADRVSFLRRGLLPIGNMVSALPIIGIAPVMVMWFGFDWQSKAAVVII 248 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 F + + V + S ++ RDL R++ S WQ + L +P +MP Sbjct: 249 MTFFPMLVNTVAGLAAS-----GSMERDLM---RTYASSDWQTLFKLKLPAAMP 294 >gi|167845820|ref|ZP_02471328.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] Length = 239 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 67 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 118 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 119 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 178 >gi|16273256|ref|NP_439497.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae Rd KW20] gi|260580821|ref|ZP_05848647.1| spermidine/putrescine transport system permease potB [Haemophilus influenzae RdAW] gi|1172563|sp|P45170|POTB_HAEIN RecName: Full=Spermidine/putrescine transport system permease protein PotB gi|1574805|gb|AAC22990.1| spermidine/putrescine ABC transporter, permease protein (potB) [Haemophilus influenzae Rd KW20] gi|260092638|gb|EEW76575.1| spermidine/putrescine transport system permease potB [Haemophilus influenzae RdAW] Length = 286 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y ++ + L E +R + +Q+F+ + +P Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG++ ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241 >gi|326797081|ref|YP_004314901.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326547845|gb|ADZ93065.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 323 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 11/138 (7%) Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 L ++F + +W + + I +DL VS+ RL + + +P S+P + Sbjct: 187 LTSMFTVTLCCLWPTLINTAVGVAAIEKDLLNVSKVLRLGWFTHVIKIVIPSSIPMMFTG 246 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI--ALAIKEQDLLAILYAMLTMLGVI- 252 + +S+ W ++A+EM+ PG+G ++ + L + A + ++G+I Sbjct: 247 LRLSLGIAWMVLIAAEMLAQN------PGLGKFVWDEFQNGSSNSLGRIMASVIVIGLIG 300 Query: 253 FLYDQLLF--RPMIVWSN 268 FL D+ + + M+ W Sbjct: 301 FLLDRTMLSIQKMVSWDK 318 >gi|313835547|gb|EFS73261.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA2] gi|314928578|gb|EFS92409.1| ABC transporter, permease protein [Propionibacterium acnes HL044PA1] gi|314970373|gb|EFT14471.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA3] gi|328908193|gb|EGG27952.1| LOW QUALITY PROTEIN: ABC transporter, permease protein [Propionibacterium sp. P08] Length = 297 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 23/41 (56%) Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 F M QS ++P +LEE R + WQ FW + VP PGL Sbjct: 176 FLMRQSFMSVPVELEEAVRLDGCNPWQTFWRVMVPVVKPGL 216 >gi|227508983|ref|ZP_03939032.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191565|gb|EEI71632.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 512 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 17/183 (9%) Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L +++I+++ A A R + + IMQ+IP L L L P I Sbjct: 28 LISLIIAIVIAIPLAVYARNHRIFAHIALGFTSIMQTIPSLAILGI-------LIPIVGI 80 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G++ AI A+ + + + Y +L I +L E + F L+ WQ+ + + +P S + Sbjct: 81 GSK-PAIIALVIYGILPIYSNTYTALTTIDPNLTEAAEVFGLTKWQRLFRIELPLSTDSI 139 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML--TMLG 250 + + S ++ + + +I G+G++I L I + L + +L Sbjct: 140 LTGIKTST----VLIIGTATLAA---LIGAGGLGTFILLGIDRSNTALTLTGAIGSALLA 192 Query: 251 VIF 253 V+F Sbjct: 193 VVF 195 >gi|213609282|ref|ZP_03369108.1| inner membrane ABC transporter permease protein YehY [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 247 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 8/122 (6%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154 +L+++Q+IP + G L + + +P G A+ A+ + + + Sbjct: 77 VLNVIQTIPSVALFGLLIAPLAGLVKQFPWLAEFGVAGTGMTPALIALVLYALLPLVRGV 136 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 L +PRD+ E +R+ +S Q+F ++ +P ++P + ++ + M VA+ +I Sbjct: 137 VAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVAAALIG 196 Query: 215 VG 216 G Sbjct: 197 AG 198 >gi|54023923|ref|YP_118165.1| putative ABC transporter membrane protein [Nocardia farcinica IFM 10152] gi|54015431|dbj|BAD56801.1| putative ABC transporter membrane protein [Nocardia farcinica IFM 10152] Length = 288 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 10/178 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 IA I +P+G+ I + ++ + P +L A P+ V + + L Sbjct: 105 IALAIAVPLGVAIAWYKPVADLLNPILELFRNTAALALLPVFVLILGIGETSK----VAL 160 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +++ + + IL N I G + A+S + R ++ +ILP P TG A Sbjct: 161 VVYASTFPILLNTITGVRTVDPLLIKSAASLGLKPLRLFQKVILPAAIPAIFTGLRMAAA 220 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + +E+ GLG I + + P + G+L + L+ N L Sbjct: 221 SSILVLLAAEMVG------ARAGLGYLITAAQQNFQIPNMYAGILAISLLGLSFNGLL 272 >gi|121599597|ref|YP_993010.1| ABC nitrate/sulfonate/bicarbonate transporter, permease protein [Burkholderia mallei SAVP1] gi|126454363|ref|YP_001066146.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242316273|ref|ZP_04815289.1| nitrate/sulfonate/taurine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|121228407|gb|ABM50925.1| ABC nitrate/sulfonate/bicarbonate transporter, permease protein [Burkholderia mallei SAVP1] gi|126228005|gb|ABN91545.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242139512|gb|EES25914.1| nitrate/sulfonate/taurine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] Length = 323 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 151 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 202 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 203 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 262 >gi|266621608|ref|ZP_06114543.1| taurine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288866706|gb|EFC99004.1| taurine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 258 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 14/115 (12%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI---FAIFTSQVWNMTFSMYQSL 158 PI +IM+ IP + ++ T+++ IG E A+ FA F V N T + + Sbjct: 102 PIFEIMRPIPPIAWIPLTILWVG-------IGLEAKAMIIFFASFVPCVINATAGIKST- 153 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + L V++++ S + F +G+P S+P + ++++ W +VA+E++ Sbjct: 154 ---NQTLINVAKTYGASDFTIFLKIGIPSSLPMTFAGIRIALNSAWSTLVAAELL 205 >gi|219871008|ref|YP_002475383.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus parasuis SH0165] gi|219691212|gb|ACL32435.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus parasuis SH0165] Length = 286 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 22/98 (22%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y S+ I L E ++ + +Q+F + +P Sbjct: 144 PIRILNTEIAVIIGLVYILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVKVIIPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG+V ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIVAGCLLVLLPAMGMFYVADLLGGAKVLLVGNII 241 >gi|254463971|ref|ZP_05077382.1| glycine betaine/proline ABC transporter, permease protein [Rhodobacterales bacterium Y4I] gi|206684879|gb|EDZ45361.1| glycine betaine/proline ABC transporter, permease protein [Rhodobacterales bacterium Y4I] Length = 679 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 15/140 (10%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V+ P+ D++Q+IP+ FL ++ F IG E +A AI + M L Sbjct: 521 VVRPVCDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAIIAYAIVPMIRYTRHGL 572 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + P ++ E + + + WQ + P++ P ++ + ++ + +V + +I G T Sbjct: 573 VSTPEEMIEAATASGATTWQMLKDIRAPYAAPSILLGLNQTILYAFAMLVIAALI--GTT 630 Query: 219 VIPLPGIGSYIALAIKEQDL 238 G+G I LA+ + D+ Sbjct: 631 -----GLGQSIYLALGQADV 645 >gi|199599186|ref|ZP_03212589.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding protein [Lactobacillus rhamnosus HN001] gi|229551031|ref|ZP_04439756.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258507070|ref|YP_003169821.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus rhamnosus GG] gi|258538258|ref|YP_003172757.1| binding-protein-dependent transport systems inner membrane component [Lactobacillus rhamnosus Lc 705] gi|199589939|gb|EDY98042.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding protein [Lactobacillus rhamnosus HN001] gi|229315626|gb|EEN81599.1| glycine/betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257146997|emb|CAR85970.1| Binding-protein-dependent transport systems inner membrane component [Lactobacillus rhamnosus GG] gi|257149934|emb|CAR88906.1| Binding-protein-dependent transport systems inner membrane component [Lactobacillus rhamnosus Lc 705] gi|259648440|dbj|BAI40602.1| glycine betaine/carnitine/choline ABC transporter ATP-binding component [Lactobacillus rhamnosus GG] Length = 220 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+ R L ++ I +++Q+IP L L+ ++ G +G I +F + + Sbjct: 51 ARHRTLSNTVIGIANVIQTIPSLAMLSIIML-------GLGLGVN-TVIVTVFLYSLLPI 102 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + Y + N+ ++L + ++ ++ WQ + + +P SM Sbjct: 103 IKNTYTGMQNVDKNLMDAAKGMGMTRWQSLYMVEIPLSM 141 >gi|84489800|ref|YP_448032.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Methanosphaera stadtmanae DSM 3091] gi|84373119|gb|ABC57389.1| predicted ABC-type nitrate/sulfonate/bicarbonate transport system, permease protein [Methanosphaera stadtmanae DSM 3091] Length = 251 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 24/184 (13%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+++V++ +IIA+I+ I +G+ G+ + +L P + P + Sbjct: 65 TLYKVILGLIIAAIVGISLGLMAGWSKYFERLTSVIVSVLRPIPPIAWIPFSI------- 117 Query: 446 LNPNLWLSL-------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 LW + ++ G + I + G E A +F ++ + +I Sbjct: 118 ----LWFGIGSLPAIFIIFMGCVFPIFVYTVDGVHRTKKVLIESALTFGVSNEQMITEVI 173 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY V+G A G A +I E+ ++G+G I ST V+G Sbjct: 174 LPSTIPYIVSGLKVAIGIALMCTISGEMIG------SSSGIGYMILTSTNLFDTGSTVVG 227 Query: 559 VLIM 562 +L++ Sbjct: 228 MLLI 231 >gi|68250139|ref|YP_249251.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 86-028NP] gi|145629580|ref|ZP_01785378.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 22.1-21] gi|145632911|ref|ZP_01788644.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 3655] gi|145641350|ref|ZP_01796929.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae R3021] gi|229844196|ref|ZP_04464337.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 6P18H1] gi|319897001|ref|YP_004135196.1| polyamine transporter subunit [Haemophilus influenzae F3031] gi|68058338|gb|AAX88591.1| spermidine/putrescine transport system permease protein [Haemophilus influenzae 86-028NP] gi|144978423|gb|EDJ88187.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 22.1-21] gi|144986567|gb|EDJ93133.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 3655] gi|145273893|gb|EDK13760.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 22.4-21] gi|229813190|gb|EEP48878.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae 6P18H1] gi|317432505|emb|CBY80863.1| polyamine transporter subunit [Haemophilus influenzae F3031] Length = 286 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y ++ + L E +R + +Q+F+ + +P Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG++ ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241 >gi|319441515|ref|ZP_07990671.1| ABC transporter, permease protein [Corynebacterium variabile DSM 44702] Length = 291 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 19/148 (12%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVW 148 AAKS + ++ P+LD MQ++P L +L +V F + + PG + A + V Sbjct: 117 AAKSETVSKIVKPVLDFMQAMPALAYLVPIIVIFGIGVTPGMI-----ATLIFCMPPGVR 171 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG-GWFFV 207 + Q + ++ E R+F +G + + +P ++P + M+G + Sbjct: 172 FTELGIRQ----VDKETVEAGRAFGATGTHILFRIQLPLALPTI-------MAGINQIIM 220 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKE 235 +A M+V+ + PG+G+ I AI Sbjct: 221 LALSMVVLAG-MAGAPGLGADITSAISS 247 >gi|317485963|ref|ZP_07944818.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316922736|gb|EFV43967.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 289 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Query: 140 FAIFTSQVWN----MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 FA+F ++ M +Y S+ + L + +R SG+Q FW++ P ++PG++ Sbjct: 152 FAVFMGILYTFLPFMVLPLYASIEKLDSRLLDAARDLGASGFQSFWHVTFPLTLPGIIAG 211 Query: 196 MMM 198 M+ Sbjct: 212 SML 214 >gi|302556764|ref|ZP_07309106.1| taurine ABC transporter, permease [Streptomyces griseoflavus Tu4000] gi|302474382|gb|EFL37475.1| taurine ABC transporter, permease [Streptomyces griseoflavus Tu4000] Length = 289 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%) Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E IF IF + S +Q + N+ R L +R F + VP S P ++ Sbjct: 157 ETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDAVIFARVVVPASTPFILV 216 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 M + + W +VA+E+I + G+G + A DL I ++++ + L Sbjct: 217 GMRVGLGSAWATLVAAELIAAQE------GLGYRMQNAQLYYDLPTIFVGLISIGILGLL 270 Query: 255 YDQLLF---RPMIVWSNK 269 D++L R + W + Sbjct: 271 MDRILLLAERKLTGWQER 288 >gi|163744369|ref|ZP_02151729.1| putative choline uptake ABC transporter permease protein [Oceanibulbus indolifex HEL-45] gi|161381187|gb|EDQ05596.1| putative choline uptake ABC transporter permease protein [Oceanibulbus indolifex HEL-45] Length = 244 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 24/124 (19%) Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +G P+ + ++P LGF + + LY + IF + V +T Sbjct: 93 MGQTFPPVAVLALAVPALGFGAGPTLVALFLY----------GLLPIFENAVTGLT---- 138 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 N+P E +R LS WQ+ W + +P ++P + + +S+ V+A + Sbjct: 139 ----NLPPATMEAARGIGLSRWQRLWRVELPLALPITLTGIRLSV------VIALGTATI 188 Query: 216 GDTV 219 G TV Sbjct: 189 GSTV 192 >gi|33151766|ref|NP_873119.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus ducreyi 35000HP] gi|33147987|gb|AAP95508.1| spermidine/putrescine transport system permease protein [Haemophilus ducreyi 35000HP] Length = 288 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ +ELA I + + M +Y S+ I L E ++ + Q+F + +P Sbjct: 146 PLRLLNSELAIIIGLVYILLPFMILPLYSSIEKIDNRLLEAAKDLGANALQRFIRITIPL 205 Query: 188 SMPGLVWNMMMSM--SGGWFFVVASEMIVVGDTVIPLPG 224 +MPG+V ++ + + G F+V ++++ G T PL G Sbjct: 206 TMPGIVAGCLLVLLPAMGMFYV--ADLLGGGKT--PLIG 240 >gi|332982861|ref|YP_004464302.1| CUT1 family carbohydrate ABC transporter membrane protein 1 [Mahella australiensis 50-1 BON] gi|332700539|gb|AEE97480.1| carbohydrate ABC transporter membrane protein 1, CUT1 family [Mahella australiensis 50-1 BON] Length = 329 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 11/115 (9%) Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 L +PR L EV+ W KFW++ VP P ++ ++M M G A ++ V Sbjct: 212 GLQGVPRSLYEVAEIDGAKAWAKFWHITVPQISPIILLQVIMGMIG------ALQIFTVA 265 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLT-----MLGVIFLYDQLLFRPMIVW 266 V P G ++ + E+ + + + +IF+ L+FR W Sbjct: 266 MFVRPTSAAGKFMNQLVYERGFTQLHMGEASAIAWILFAIIFVLTLLIFRSTPAW 320 >gi|323968049|gb|EGB63459.1| inner membrane transport system [Escherichia coli M863] gi|323977681|gb|EGB72767.1| inner membrane transport system [Escherichia coli TW10509] gi|327253257|gb|EGE64911.1| inner membrane ABC transporter permease protein yehY [Escherichia coli STEC_7v] Length = 385 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP-----GKVIGAELAAIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P G A+ A+ + + + Sbjct: 215 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGTLGVAGTGMTPALIALVLYALLPLVRGV 274 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG Q+F ++ +P ++P Sbjct: 275 VVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALP 310 >gi|298294221|ref|YP_003696160.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296930732|gb|ADH91541.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 305 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 6/123 (4%) Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ AIF +F + + + S + ++P++ V+R S Q FW + +P +P L Sbjct: 167 GDVPAIFLVFITVFFAIVLSTGAQIESVPKNYIHVARIMGASQRQTFWKVILPAILPSLF 226 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + +++ W V+ +E + VG G+G ++A + + + M + + F Sbjct: 227 MTLRLNLFAAWMVVLIAETVGVGT------GLGQITSMARSTFNAKLVFFTMAIIGLLGF 280 Query: 254 LYD 256 L D Sbjct: 281 LSD 283 >gi|260582675|ref|ZP_05850463.1| spermidine/putrescine transport system permease potB [Haemophilus influenzae NT127] gi|260094241|gb|EEW78141.1| spermidine/putrescine transport system permease potB [Haemophilus influenzae NT127] Length = 286 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y ++ + L E +R + +Q+F+ + +P Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG++ ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241 >gi|170692339|ref|ZP_02883502.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gi|170142769|gb|EDT10934.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 274 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 17/202 (8%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 FT ++ +W IT+ V+ + + + + VG+W+ P S+ P+ + + P Sbjct: 65 FTTGEIYLHLW---ITLLETVLAFALGTALGLGVGLWLALSPLASALFDPYIKAANSMPR 121 Query: 431 NVFFPLVVSCVSYYHLN--PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 + P+ ++ L + L + ++F + + FNV G A Sbjct: 122 VILAPIF---GVWFGLGIWSKVALGVTLVF---FIVFFNVYQGVKEVSPVVLANARMLGA 175 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 G + RY+ LP + + T+ G A+ S+V E G+G I ++ Sbjct: 176 NGKQLLRYVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLG------SARGVGYLILQAEG 229 Query: 549 KGSFPEVVLGVLIMCCFVLALN 570 V G+L++ F L L+ Sbjct: 230 TFDINTVFAGILVLTAFALILD 251 >gi|167911037|ref|ZP_02498128.1| ABC transporter, permease protein [Burkholderia pseudomallei 112] Length = 239 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 67 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 118 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 119 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 178 >gi|167824274|ref|ZP_02455745.1| ABC transporter, permease protein [Burkholderia pseudomallei 9] Length = 273 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 101 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 152 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 153 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 212 >gi|116754017|ref|YP_843135.1| phosphate ABC transporter, inner membrane subunit PstC [Methanosaeta thermophila PT] gi|116665468|gb|ABK14495.1| phosphate ABC transporter membrane protein 1, PhoT family [Methanosaeta thermophila PT] Length = 301 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 30/193 (15%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCV-----------VCGVAIGIAWQSIGYIVNHFTYQDVL 377 E+ L + + ++ M+ IF + + V + +G W S G N F + ++ Sbjct: 17 ESLLLITAVASIAIMILIFAYLIRESLPAIFEVGVLNLVLGEKWHSSG---NIFGMRPLI 73 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIG--FRPHISSKIQPFAQLLAAFPANVF-F 434 T+ ++ + I + IP+ I++ P + ++P +LLA P+ V+ F Sbjct: 74 ------VNTLLVAILALAINMSVGIPLAIYLAELSGPRTRAVLKPAVELLAGVPSIVYGF 127 Query: 435 PLVVSCVSYYH-----LNPNLWLSLLMIFGTQWYILFNVIAGAS--AFPNDFKEVASSFH 487 ++ V Y L L+ ++ G + I + A PN+FKE + + Sbjct: 128 LGIIILVPYLGNTFDMLTGRSILAGAILLGVMFIPSITTICEDALRAVPNEFKEGSMALG 187 Query: 488 ITGWRWWRYIILP 500 T W+ RY++LP Sbjct: 188 ATRWQTIRYVVLP 200 >gi|284045270|ref|YP_003395610.1| binding-protein-dependent transporters inner membrane component [Conexibacter woesei DSM 14684] gi|283949491|gb|ADB52235.1| binding-protein-dependent transport systems inner membrane component [Conexibacter woesei DSM 14684] Length = 280 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 28/180 (15%) Query: 399 IIWIPVGIWIGFRPHI----SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I IPVG+ +G + + Q L P PL + LWL + Sbjct: 95 LIGIPVGLALGIAAGLFKLGEELVDATMQALRTVPFVSLIPLFI-----------LWLGI 143 Query: 455 -------LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 L+ FG + + N AG E A F + + R +++PG P + Sbjct: 144 GDTSKIALIAFGVTFPVYMNTYAGIRGVDAKLIEAAEVFGLNRRQLVRQVVVPGALPSIL 203 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G A G + A +VSE + + G+GA ++++ + V++G+L+ L Sbjct: 204 VGLRYALGLSVIALVVSETVNANN------GIGALVSDARQFLQTEVVLVGILVYSALGL 257 >gi|225568975|ref|ZP_03778000.1| hypothetical protein CLOHYLEM_05054 [Clostridium hylemonae DSM 15053] gi|225162474|gb|EEG75093.1| hypothetical protein CLOHYLEM_05054 [Clostridium hylemonae DSM 15053] Length = 280 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 27/47 (57%) Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 L +IP D+ E ++ +GWQ+ W + +P MP + M +S++ G Sbjct: 165 GLQSIPGDVMEAAQIDGATGWQRLWKVTIPMMMPSITICMFLSITNG 211 >gi|297201877|ref|ZP_06919274.1| glycine betaine ABC transporter integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197712750|gb|EDY56784.1| glycine betaine ABC transporter integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 645 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 23/159 (14%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 A SRR+ +L P+LD MQ +P +L V+ F P AA+ A Sbjct: 168 AGLSRRMDKILRPVLDTMQVMPAYAYLLPVVLVFGMGVP--------AAVLATVVYAAPP 219 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWF 205 M L +++ E S + Q+ +P + GL +MM++S Sbjct: 220 MARLTALGLQGADKEVLEAVESLGTTARQRLLTARIPLARKELLLGLNQTIMMALS---M 276 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 V+AS VI G+G + A+ D+ A L A Sbjct: 277 AVIAS--------VIGAAGLGDRVYQALASVDVGAALAA 307 >gi|126728823|ref|ZP_01744638.1| glycine betaine/proline ABC transporter, permease protein [Sagittula stellata E-37] gi|126710753|gb|EBA09804.1| glycine betaine/proline ABC transporter, permease protein [Sagittula stellata E-37] Length = 344 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 31/152 (20%), Positives = 75/152 (49%), Gaps = 22/152 (14%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 ++S RL +L P+LD++Q++P +L +++ ++ K+ G + + ++ N+ Sbjct: 176 SRSDRLQGILTPVLDMLQTLPPFVYL-IPLIFLFSVTEPKLYGIAVILYAIVPVVRLTNL 234 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFF 206 + D+ E + +F ++ QK + + +P ++P G+ +MMS++ Sbjct: 235 GIRLVNP------DVIEAADAFGMTKSQKLFGVQIPLALPNIMAGVNQTIMMSLA----- 283 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 M+V+ +++ PG+G + I+ +L Sbjct: 284 -----MVVIA-SMVSAPGLGILVLRGIRNLEL 309 >gi|56696030|ref|YP_166384.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56677767|gb|AAV94433.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 687 Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 15/140 (10%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 V+ PI D++Q+IP+ FL ++ F IG E +A AI + M L Sbjct: 529 VVRPICDMLQTIPLFVFLIPVLMVFQ-------IG-EFSAFLAICAYAIVPMIRYTRHGL 580 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + P ++ E + S + WQ + P++ P ++ + ++ + A M+V+ Sbjct: 581 VDTPDEMMEAAISSGATDWQILRDVRAPYAAPTILLGLNQTI------LYAFSMLVIA-A 633 Query: 219 VIPLPGIGSYIALAIKEQDL 238 +I G+G I LA+ + D+ Sbjct: 634 LIGTTGLGQSIYLALGQADV 653 >gi|330810520|ref|YP_004354982.1| glycine betaine ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378628|gb|AEA69978.1| putative Glycine betaine ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 282 Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 100 LVPILDIMQSIPILGFLTFTVVYF-MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L P+LD+MQ++P +L T+ F + + PG + +FAI + +T Y + Sbjct: 127 LRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS----TVVFAI--AAPIRLT---YLGI 177 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMSMSGGWFFVVASEMIV 214 ++P +L + ++F S Q + +P +MP G+ +M+S+S M+V Sbjct: 178 RDVPDELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLS----------MVV 227 Query: 215 VGDTVIPLPGIGSYIALAIKEQDL 238 + ++ G+G + A+ D+ Sbjct: 228 IA-ALVGADGLGKPVVNALNTADI 250 >gi|323972886|gb|EGB68084.1| inner membrane transport system [Escherichia coli TA007] Length = 302 Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust. Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 8/96 (8%) Query: 103 ILDIMQSIP---ILGFLTFTVVYFMNLYP--GK--VIGAELA-AIFAIFTSQVWNMTFSM 154 +L+++Q++P + G L + + +P GK + G + A+ A+ + + + Sbjct: 132 LLNVIQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGV 191 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 L IPRD+ E +R+ +SG ++F ++ +P ++P Sbjct: 192 VVGLNQIPRDVLESARAMGMSGARRFLHVQLPLALP 227 >gi|254188718|ref|ZP_04895229.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|157936397|gb|EDO92067.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] Length = 323 Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 151 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 202 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 203 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 262 >gi|124385635|ref|YP_001026342.1| permease [Burkholderia mallei NCTC 10229] gi|126450587|ref|YP_001080384.1| permease [Burkholderia mallei NCTC 10247] gi|254178339|ref|ZP_04884994.1| permease [Burkholderia mallei ATCC 10399] gi|254358544|ref|ZP_04974817.1| permease [Burkholderia mallei 2002721280] gi|124293655|gb|ABN02924.1| permease [Burkholderia mallei NCTC 10229] gi|126243457|gb|ABO06550.1| permease [Burkholderia mallei NCTC 10247] gi|148027671|gb|EDK85692.1| permease [Burkholderia mallei 2002721280] gi|160699378|gb|EDP89348.1| permease [Burkholderia mallei ATCC 10399] Length = 313 Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 95 RLGMVLVPILDIM-QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RLG L+ +L M +P + L +++F L G ++ F + + +W + S Sbjct: 141 RLGRDLLTMLTAMFNPLPSIALLPLALLWF-GLGTGSLL-------FVLVHAVLWPLALS 192 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + +P L V R++ L+G + + VP ++P ++ + ++ + W ++A+E++ Sbjct: 193 TFAGFQAVPATLRMVGRNYGLTGVRHVVAILVPAALPSILAGLKVAWAFAWRTLIAAELV 252 >gi|322371333|ref|ZP_08045885.1| sugar ABC transporter permease protein [Haladaptatus paucihalophilus DX253] gi|320549323|gb|EFW90985.1| sugar ABC transporter permease protein [Haladaptatus paucihalophilus DX253] Length = 292 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 17/109 (15%) Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS---MY 155 ++VP +IM + P++G LT +LY K AA+ I T +N+ F+ M Sbjct: 129 LIVPFFEIMSNPPVIGALT------GSLYNTK------AAL--ILTYTFFNLPFAVWIMK 174 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 +PR L+E ++ S W+ F+ + +P + PG+ +++ W Sbjct: 175 NYFDGVPRSLDEQAQVDGCSTWEGFFKVILPVAKPGIAATAILAFIFSW 223 >gi|294789947|ref|ZP_06755167.1| choline transporter [Simonsiella muelleri ATCC 29453] gi|294482113|gb|EFG29820.1| choline transporter [Simonsiella muelleri ATCC 29453] Length = 517 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 A+ +R ++ +I+Q+IP L L + + P +I L A+ IF Sbjct: 42 ARRQRAAEAVLQFTNILQTIPSLALLGLLIPFVGIGSPPVLIALTLYALLPIFQ------ 95 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + Y L I + +++ SF LS WQ + +P ++P ++ Sbjct: 96 --NTYLGLTQIDQSIQDAYTSFGLSRWQSLCRIELPMALPAMI 136 >gi|282861503|ref|ZP_06270567.1| binding-protein-dependent transport systems inner membrane component [Streptomyces sp. ACTE] gi|282563319|gb|EFB68857.1| binding-protein-dependent transport systems inner membrane component [Streptomyces sp. ACTE] Length = 301 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 IPR+++E + L+ + FW L +P + PGL S W V + +VGD Sbjct: 188 TIPREIDESGQVDGLTPFGTFWRLILPLAKPGLAVTAFYSFITAWGEVAYASAFMVGDEN 247 Query: 220 IPLPG 224 + L G Sbjct: 248 LTLAG 252 >gi|149915780|ref|ZP_01904305.1| probable sugar ABC transporter, permease protein [Roseobacter sp. AzwK-3b] gi|149810362|gb|EDM70207.1| probable sugar ABC transporter, permease protein [Roseobacter sp. AzwK-3b] Length = 315 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 111 PILGFLTFTVVYFMNLYPGK--VIGAELAAIFAIFTSQVWNMT-FSMY---QSLCNIPRD 164 P +G + + +F P +IG A +AI + W T F M L +IP Sbjct: 150 PQIGLFNYVIAFFTGADPASFSMIGDVHLAPWAIVIADTWMWTPFVMLICLAGLRSIPDS 209 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + E + R S W++FW + VP +P L+ Sbjct: 210 IYEAAECDRASKWRQFWTITVPMVLPFLM 238 >gi|118586955|ref|ZP_01544387.1| ABC-type aliphatic sulfonate transport system, permease component [Oenococcus oeni ATCC BAA-1163] gi|118432577|gb|EAV39311.1| ABC-type aliphatic sulfonate transport system, permease component [Oenococcus oeni ATCC BAA-1163] Length = 251 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 10/143 (6%) Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q+L P PL++ + + +S+ G + + N G ++ E+ Sbjct: 94 QMLRNIPHLALIPLIILVIGIGEPSKIFLVSV----GCMFPMYINTYHGVTSIDKGLVEM 149 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S+ ++ + + II PG P + G A G W IV+E + ++G+G Sbjct: 150 GRSYGLSNSQVFFKIIFPGALPTILMGVRYALGVMWTTLIVAETVA------TSSGIGYM 203 Query: 543 IAESTEKGSFPEVVLGVLIMCCF 565 E+ + V+L +LI F Sbjct: 204 ANEAEQFTDMSTVILCILIYALF 226 >gi|312139029|ref|YP_004006365.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311888368|emb|CBH47680.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 285 Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + V M Y + N+ R + E +R F L+GW+ +P ++PG++ + + +S Sbjct: 157 IAVATVAPMYAYTYLGVRNVDRKMVEAARGFGLTGWRLVAEAILPAALPGVLMGLRICLS 216 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK--EQDLLAILYAMLTMLGVIF 253 ++A+E + + GIG + LA + D + + + LG++F Sbjct: 217 LSITGLIAAEQVGTRE------GIGYLVTLAQEYNRTDYMVLCVVLYAALGLVF 264 >gi|293392031|ref|ZP_06636365.1| putrescine transport system permease protein PotH [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952565|gb|EFE02684.1| putrescine transport system permease protein PotH [Aggregatibacter actinomycetemcomitans D7S-1] Length = 286 Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust. Identities = 21/98 (21%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y S+ + L E ++ + +Q+F+ + +P Sbjct: 144 PIRILNTEVAVIIGLVYLLLPFMILPLYSSIEKLDGRLLEAAKDLGANAFQRFFRVILPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG+V ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIVAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241 >gi|329938447|ref|ZP_08287872.1| putative ABC transporter permease protein [Streptomyces griseoaurantiacus M045] gi|329302420|gb|EGG46311.1| putative ABC transporter permease protein [Streptomyces griseoaurantiacus M045] Length = 297 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 14/134 (10%) Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 V A L + R + VL P+L + Q++P + +V+F KV+ L A F + Sbjct: 115 LVCAVLITQFRTVERVLFPLLILTQTVPKVAMAPLLIVWFGIGISSKVLTVALIAFFPLL 174 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP----GLVWNMMMS 199 + + + Y+ + E+ RSF S Q +L +P ++P GL +++S Sbjct: 175 INAILGFRSAAYEQV--------EMLRSFGASRLQVMRHLQIPSALPHIFAGLEVAVILS 226 Query: 200 MSGGWF--FVVASE 211 ++G FV +SE Sbjct: 227 VTGAVVAEFVGSSE 240 >gi|295103441|emb|CBL00985.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Faecalibacterium prausnitzii SL3/3] Length = 256 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 5/109 (4%) Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P QL+ A P F L + V L+ + +S LM+ + + IAGA Sbjct: 92 LAPVMQLVKATPVASFIILALVWVRGSALS--VLISFLMVLPVLYGAVRTGIAGADV--- 146 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 E+A+ F + R R + LP + P + G A G W + + +EV Sbjct: 147 QLLEMAAVFRLPAGRRLRAVWLPAVLPAFRQGCSVALGICWKSGVAAEV 195 >gi|302537486|ref|ZP_07289828.1| nitrate ABC transporter, permease [Streptomyces sp. C] gi|302446381|gb|EFL18197.1| nitrate ABC transporter, permease [Streptomyces sp. C] Length = 322 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 10/178 (5%) Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 IA ++ +P+G+ IG+ +++ + P +L A P+ V + + + Sbjct: 141 IAVVVAVPLGLLIGWYRPVAAFLGPLLELFRNTAALALLPVFVLLLGIGETSK----VSI 196 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +++ W IL N I+ +A S ++ R ++ +ILP P TG I G Sbjct: 197 VVYACVWPILLNTISAVGNADPTLVRLARSMDLSTPRLFQKVILPASVPAVFTG-IRLAG 255 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 SI+ VA+ + GLG I S + P++ G++ + +A N+ L Sbjct: 256 A---VSILVLVAA--EMIGAKAGLGYLINASQFNFAIPQMYAGIVTISAIGVAFNQVL 308 >gi|229815114|ref|ZP_04445451.1| hypothetical protein COLINT_02156 [Collinsella intestinalis DSM 13280] gi|229809344|gb|EEP45109.1| hypothetical protein COLINT_02156 [Collinsella intestinalis DSM 13280] Length = 309 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 9/164 (5%) Query: 65 ASRTTLRMLSAMVISL---LFTFVYATLAAKSRRLGMVLVPILDIMQSIP--ILGFLTFT 119 A+ T L + A+VI + + T VY T A S R+ ++ P +D++ IP I GF Sbjct: 92 AAGTALVTVGALVIGVPLGVGTAVYLTEIA-SARVRALISPAVDLLAGIPSIIYGFFGMV 150 Query: 120 VV--YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 ++ + +L G GA L A F + V +T +L +IP + E S + + W Sbjct: 151 IIRPFVADLTGGLGFGA-LTAWFVLAIMIVPTITTLTIDALNSIPMGIREASFAMGATKW 209 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 Q + + +P + G+V +++ M +A M+V VIP Sbjct: 210 QTIYKVVLPAAKFGIVDAVVLGMGRAIGETMAVLMVVGNAPVIP 253 >gi|91780784|ref|YP_555991.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693444|gb|ABE36641.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 273 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 4/140 (2%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV IA+++ + +G+ IG+ + S ++P Q L P + PL + + P Sbjct: 78 RVFAGFGIATVLGVAIGMAIGWSRAVESLVEPTLQTLRPVPPVSWIPLAIIWFGIAN-KP 136 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + L+ G+ + +L + I G D + + R+I+ P P + Sbjct: 137 AI---FLVFMGSFFPVLLSTIHGVKTCDRDLLRAGAMTGGSPQMLLRHIVFPAALPSIFS 193 Query: 509 GAITACGGAWNASIVSEVAS 528 G A G AW ++ +E+ + Sbjct: 194 GLRIAIGSAWMLTVTAEMVA 213 >gi|255283392|ref|ZP_05347947.1| ABC transporter, permease protein [Bryantella formatexigens DSM 14469] gi|255266040|gb|EET59245.1| ABC transporter, permease protein [Bryantella formatexigens DSM 14469] Length = 266 Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust. Identities = 26/113 (23%), Positives = 57/113 (50%), Gaps = 10/113 (8%) Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIG-AELAAIFAIFTSQVWNMTFSMYQSLCN 160 P++ +++ I + +L F V++ +G ++ AI IF + + + S ++ N Sbjct: 101 PVIQLLRPIAPVAWLPFIVLW---------VGIGDVPAIAIIFIAGFFPVLLSTAAAVKN 151 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + R +V+ +FRLS + + P P + ++ M++ W F+V+ EM+ Sbjct: 152 VDRVYLKVAENFRLSQPETLLKIVFPAVFPQIASSLHMALGTCWIFLVSGEMV 204 >gi|145636051|ref|ZP_01791721.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae PittHH] gi|145270573|gb|EDK10506.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae PittHH] Length = 286 Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +++ E+A I + + M +Y ++ + L E +R + +Q+F+ + +P Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203 Query: 188 SMPGLVWNMMMSM--SGGWFFVV----ASEMIVVGDTV 219 +MPG++ ++ + + G F+V +++++VG+ + Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVI 241 >gi|78777545|ref|YP_393860.1| binding-protein dependent transport system inner membrane protein [Sulfurimonas denitrificans DSM 1251] gi|78498085|gb|ABB44625.1| Binding-protein-dependent transport systems inner membrane component [Sulfurimonas denitrificans DSM 1251] Length = 260 Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 19/200 (9%) Query: 67 RTTL-RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +TTL R ISLLF LA M+ PI+ I+ +P + ++ +++F Sbjct: 68 KTTLYRSSVGFGISLLFGTALGLLAGFFATASMMSRPIVTILVGMPPIAWIVLAMIWFG- 126 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +G E IF + + + Q + DL+E+++SF KF + Sbjct: 127 ------MGDE-TVIFTVIVASFPIIFVGALQGTRTLDGDLKEMAKSFNFPWHMKFLDVYF 179 Query: 186 P--FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 P FS W + M+ W V+ +E++ D GIG+ +A A + D L Sbjct: 180 PHIFSYVFPAWVSALGMA--WKIVIMAELLATSD------GIGASLATARSQLDTPTALA 231 Query: 244 AMLTMLGVIFLYDQLLFRPM 263 + M+G + + ++ P+ Sbjct: 232 IVSIMIGSLMFIEYIILEPI 251 Searching..................................................done Results from round 2 >gi|255764497|ref|YP_003065010.2| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] gi|254547848|gb|ACT57070.2| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] Length = 587 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 587/587 (100%), Positives = 587/587 (100%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS Sbjct: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV Sbjct: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF Sbjct: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA Sbjct: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY Sbjct: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA Sbjct: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP Sbjct: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK Sbjct: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG Sbjct: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL Sbjct: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 >gi|115352494|ref|YP_774333.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|172061350|ref|YP_001809002.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gi|115282482|gb|ABI87999.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|171993867|gb|ACB64786.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 585 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 313/574 (54%), Positives = 408/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W V I W+ + ++ T Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWSGFVLICTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RVVVLI IAS+IW+P+G+ IG RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 ADVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ + IG + D Sbjct: 3 VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ ++ + + G + P +L + P F Sbjct: 63 SNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ +F Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNF 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + +L M +LA ++FL+ PL + + Sbjct: 243 GAIGWVILTMTVVILAYDQFLFRPLIAWADK 273 >gi|171321263|ref|ZP_02910228.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] gi|171093457|gb|EDT38635.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] Length = 585 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 314/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W V I W+ + ++ T Sbjct: 318 LRLPLS-GTMRFTLPK------VEKKASRTVDIAWSGFVLIGTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 ADVGHVLVLGLITLLRVVVLITIASVIWVPIGVWVGLRPRLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 97/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ + IG + D Sbjct: 3 VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ ++ + + + G + P +L + P F Sbjct: 63 SNLPEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ +F Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNF 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + +L M +LA ++FL+ PL + + Sbjct: 243 GAIGWVILTMTVVILAYDQFLFRPLIAWADK 273 >gi|107025965|ref|YP_623476.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116692851|ref|YP_838384.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|170737883|ref|YP_001779143.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|105895339|gb|ABF78503.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116650851|gb|ABK11491.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|169820071|gb|ACA94653.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 584 Score = 574 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 304/574 (52%), Positives = 406/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G +T P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + S + Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ G ++ S +R S + DI W V + + +AW+ + ++ T Sbjct: 318 LRVPSVTG--------TRVREASARRSSRIGDIVWGAFVILLTVYVAWRVVSFVATGVTV 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 370 AEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+W Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 97/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 I F P + + + D F ++ G+ IG + D Sbjct: 3 ISFFDPNRTANASAWRVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ +I + + + G + P +L + P + Sbjct: 63 SNLPEYALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V ++ M +LA ++FL+ PL + + Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273 >gi|206560942|ref|YP_002231707.1| binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|198036984|emb|CAR52905.1| binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] Length = 585 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 312/574 (54%), Positives = 410/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPSGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W +V I W+ + ++ T Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTKIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 >gi|78067194|ref|YP_369963.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77967939|gb|ABB09319.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia sp. 383] Length = 585 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 311/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPG+G+Y+A AI +++L AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGVGAYLAQAISDKNLGAIGWVILTMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + Sbjct: 258 AYDQFLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P ++ S +DI W +V + W+ + ++ T Sbjct: 318 LRLPLS-GAMRFSLPR------VEKKASRTVDIAWAILVLIGTAYVVWRVVSFVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RV VLI IAS+IW+PVG+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVLVLGLITLLRVAVLIAIASVIWVPVGVWIGLRPRLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPAFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG+ + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGNTKIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ + IG + D Sbjct: 3 VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ ++ + + + G + P +L + P F Sbjct: 63 SNLPEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGVGAYLAQAISDKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + +L M +LA ++FL+ PL + + Sbjct: 243 GAIGWVILTMSVVILAYDQFLFRPLVAWADK 273 >gi|254247536|ref|ZP_04940857.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia PC184] gi|124872312|gb|EAY64028.1| Binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia PC184] Length = 585 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W +V I W+ + ++ T Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTVAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 584 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 10/273 (3%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQ 374 + F P + + + D F ++ + IG + Sbjct: 1 MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISL 60 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 D + T R++ ++ + + G + P +L + P F Sbjct: 61 DPSNLPEYALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFI 120 Query: 435 PLVVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 V+ L L + W + F+ P D EV+ FH+T Sbjct: 121 SFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTS 180 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W+ + + +P P + + + G W + SE + G+ + G+GAY+A++ Sbjct: 181 WQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK 240 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 +F + +L M +LA ++ L+ PL + + Sbjct: 241 NFGAIGWVILTMTVVILAYDQLLFRPLIAWADK 273 >gi|134296585|ref|YP_001120320.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] gi|134139742|gb|ABO55485.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] Length = 585 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIATLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W +V I W+ + ++ T Sbjct: 318 LRLPVS-GAMRFSLPK------VEKKASRTVDIAWAVLVVLATAYIVWRVVSFVATGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +VI LG IT+ RVVVLI IAS++W+P+G+ +G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVIVLGLITLLRVVVLISIASVVWVPIGVLVGLRPKLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 93/271 (34%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ + I + D Sbjct: 3 VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIATLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ ++ + + G + P +L + P F Sbjct: 63 SNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + +L M +LA ++ L+ PL + + Sbjct: 243 GAIGWVILTMTVVILAYDQLLFRPLIAWADK 273 >gi|167585833|ref|ZP_02378221.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 584 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 312/583 (53%), Positives = 414/583 (71%), Gaps = 7/583 (1%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 N + + R+ PN +D +AF L+I +I + + G ET P ++ I+LD +LP+Y Sbjct: 8 NRIANASAWRVLPNRWDFIAFPLIICVIAMAVVGFHETMAPITTLNTQKISLDPSNLPEY 67 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RTTLRML+AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ Sbjct: 68 ALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L+P +V+GAELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L Sbjct: 128 ALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLE 187 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + Sbjct: 188 VPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDKNLGAIGWV 247 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 +L M VI YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + Sbjct: 248 ILAMTVVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGW 307 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 F+ + +L + G +RF P ++ S+ DI W +V + W+ + Sbjct: 308 LFAKAARIPLRLPLS-GAVRFTLPR------VEKKASFAADIAWALLVLAGTAYVVWRVV 360 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ T +V +V LG IT+ RV+VLI IAS+IW+P+G+WIG RP ++ K+QP AQ Sbjct: 361 SFVAAGVTMAEVGHVFTLGLITLLRVIVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQF 420 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+ FP V ++++ LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A+ Sbjct: 421 LAAFPANLLFPAFVIVIAHFRLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT 480 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F I GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG+ + GLGAYIA Sbjct: 481 NFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGNTKIEAHGLGAYIA 540 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++T G FP+++LG+ +M FV NR LW PLY Y LRL Sbjct: 541 QTTAAGDFPKIILGITVMSLFVTLFNRLLWRPLYAYAESKLRL 583 >gi|172063625|ref|YP_001811276.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gi|171996142|gb|ACB67060.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 584 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 304/574 (52%), Positives = 403/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G +T P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQAQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR+GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRVGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + S + Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + G + S + S + DI W V + + + W+ +G++ T Sbjct: 318 LRAPSRNGAP--------SRAASARGSSRLGDIVWGTFVILITVYVGWRVVGFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 370 GDVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+W Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 99/271 (36%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------DV 376 IRF P + + + D F ++ G+ + T Q D Sbjct: 3 IRFFDPNRTANASAWRVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQAQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ ++ + + + G + + P +L + P + Sbjct: 63 SNLPEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRVGMVLIPILDILQSVPVLGYISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V ++ M +LA ++FL+ PL + + Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273 >gi|107023335|ref|YP_621662.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116690418|ref|YP_836041.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|170733738|ref|YP_001765685.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|105893524|gb|ABF76689.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116648507|gb|ABK09148.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|169816980|gb|ACA91563.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 585 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 313/574 (54%), Positives = 411/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++ AI + +LTM VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNFGAIGWVILTMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP+I W++KFR+E T SW+L L R+T + + + FF+ + Sbjct: 258 AYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P+ ++ S +DI W +V I W+ + ++ T Sbjct: 318 LRLPLS-GAMRFTLPK------VEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RVVVLI IAS+IW+P+G+W+G RP ++ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTAAGDFP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 584 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 10/273 (3%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQ 374 + F P + + + D F ++ + IG + Sbjct: 1 MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISL 60 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 D + T R++ ++ + + G + P +L + P F Sbjct: 61 DPSNLPEYALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFI 120 Query: 435 PLVVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 V+ L L + W + F+ P D EV+ FH+T Sbjct: 121 SFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTS 180 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W+ + + +P P + + + G W + SE + G+ + G+GAY+A++ Sbjct: 181 WQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK 240 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 +F + +L M +LA ++ L+ PL + + Sbjct: 241 NFGAIGWVILTMTVVILAYDQLLFRPLIAWADK 273 >gi|307728994|ref|YP_003906218.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] gi|307583529|gb|ADN56927.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] Length = 583 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 308/574 (53%), Positives = 406/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I II + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKNQTISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAITEKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + + F+ + Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ L RF P+ Q+ S + DI W +V + + ++ Y+ + Sbjct: 317 LRMP-ALQGPRFQIPQ-------IQKSSRVGDIVWGALVLIGTVYVVYRVFMYVRTGVSL 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVV+LI +AS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 DEVGHVFLLGLITLLRVVLLIALASLIWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W Sbjct: 429 FPVFVIAIVRFNLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAARNFHIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G +P Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVVAHGLGAYIAQSTAAGDYP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++++G+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582 >gi|254250281|ref|ZP_04943601.1| ABC-type anion transport system, duplicated permease component [Burkholderia cenocepacia PC184] gi|124876782|gb|EAY66772.1| ABC-type anion transport system, duplicated permease component [Burkholderia cenocepacia PC184] Length = 584 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 304/574 (52%), Positives = 405/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G +T P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + S + Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWMLSQAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ G + S +R S + DI W V + + +AW+ + ++ T Sbjct: 318 LRVPSLTG--------TRVHGASARRSSRIGDIVWGVFVILLTVYVAWRVVSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 370 AEVGHVLVLGLITLLRVLVLIAIASMIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+W Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTVAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 97/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 I F P + + + D F ++ G+ IG + D Sbjct: 3 ISFFDPNRTANASAWRVLPNRWDAIAFPLIIGILAMAIVGFHQTMAPIGVLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ +I + + + G + P +L + P + Sbjct: 63 SNLPEYALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V ++ M +LA ++FL+ PL + + Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273 >gi|323525236|ref|YP_004227389.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] gi|323382238|gb|ADX54329.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1001] Length = 583 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 310/574 (54%), Positives = 406/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I II + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAAAITEKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + + F+ + Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L L RF P+ Q+ S + DI W +V + + ++ Y+ + Sbjct: 317 FRLP-ALQGPRFPIPQM-------QKSSRVGDIVWGALVLLGTVYVVYRVFIYVRTGVSL 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVV+LI +AS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 DEVGHVFLLGLITLLRVVLLIALASVIWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W Sbjct: 429 FPVFVIVIVRFHLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G +P Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTRVAAHGLGAYIAQSTAAGDYP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++++G+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|238028311|ref|YP_002912542.1| hypothetical protein bglu_1g27720 [Burkholderia glumae BGR1] gi|237877505|gb|ACR29838.1| Hypothetical protein bglu_1g27720 [Burkholderia glumae BGR1] Length = 584 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 309/583 (53%), Positives = 406/583 (69%), Gaps = 7/583 (1%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 N + + R+ PN +D +AF L++ +I + G ET P + I+LD +LP+Y Sbjct: 8 NRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPEY 67 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RTTLRML+AM+ SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ Sbjct: 68 ALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L P +V GAELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L Sbjct: 128 ALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLE 187 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VPFSMPGLVWNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI EQ+L A+ + Sbjct: 188 VPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQNLHAVGWV 247 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 +LTM VI YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + Sbjct: 248 ILTMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGW 307 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 F+ ++ +L + RF P ++ S + DI W +V + W+ + Sbjct: 308 LFAKMARLPFRLP-SFDAARFALPR------VEKQASRVADIGWAILVLLGTAYVVWRVV 360 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ T +V +V LG T+ RVVVLI+IAS+IW+P+G+WIG RP ++ K QP AQ Sbjct: 361 AFVSTGVTLAEVGHVFLLGLATLLRVVVLIVIASVIWVPIGVWIGLRPALAEKAQPVAQF 420 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+ FP+ V ++ Y LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A+ Sbjct: 421 LAAFPANLLFPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT 480 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F I GW+WWR ILPGI PYY+TGAITA GGAWNASIVSE WG GLGAYIA Sbjct: 481 NFRIRGWQWWRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIA 540 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + T G +P++++G+ +M FV NR LW PLY Y LRL Sbjct: 541 QMTAAGDYPKIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRL 583 Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 94/266 (35%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P + + + D F ++ V A I + D + Sbjct: 7 PNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP----LV 437 T R++ +I + + + G + P +L + P + Sbjct: 67 YALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 ++ + L + W + F+ P D EV+ FH+T W+ + + Sbjct: 127 LALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P V + + G W + SE + G+ + G+GAY+A++ + + V Sbjct: 187 EVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQNLHAVGW 246 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 +L M +LA ++ L+ PL + + Sbjct: 247 VILTMTVVILAYDQLLFRPLVAWADK 272 >gi|295675893|ref|YP_003604417.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] gi|295435736|gb|ADG14906.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] Length = 583 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 308/574 (53%), Positives = 408/574 (71%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICLIAMASIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ ++PG+V+G Sbjct: 77 AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLAMFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + F+ + V Sbjct: 257 AYDQLLFRPLVAWADKFRMEFTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFARAAR-V 315 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + RFH P+ +++ S + DI W +V + + ++ Y+ T Sbjct: 316 RFQLPAFSAPRFHIPQ-------SEKNSKLGDIIWAAIVLLATVYVVYRVFLYVRTGVTL 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ +V LG +T+ RVVVLI IAS+IW+PVG+ IG RP ++ K+QP AQ LAAFPAN+ Sbjct: 369 DEIGHVFLLGLVTLLRVVVLIAIASVIWVPVGVLIGLRPALAEKVQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGAS++PND++E A +FHI GW+W Sbjct: 429 FPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGASSYPNDYREAAKNFHIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIV+E WG L GLGAYIA++T G +P Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTRLAAHGLGAYIAQTTAAGDYP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++++G+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEGKLRL 582 >gi|161524071|ref|YP_001579083.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189351168|ref|YP_001946796.1| sulfonate/nitrate/taurine transporter permease [Burkholderia multivorans ATCC 17616] gi|221199378|ref|ZP_03572422.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221205720|ref|ZP_03578735.1| ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221211591|ref|ZP_03584570.1| ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160341500|gb|ABX14586.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189335190|dbj|BAG44260.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221168952|gb|EEE01420.1| ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221174558|gb|EEE06990.1| ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221180663|gb|EEE13066.1| ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 584 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 309/574 (53%), Positives = 406/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQSQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+P +V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPSRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+GWQ+FW L VPFSMPGLV Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKLEVPFSMPGLV 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAEAIVERNLGAVGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + F+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKAARIP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L T + F ++ S + D+ W VV + W+ + ++ T Sbjct: 317 LRLSPTRAM-------RFTLPRVEKKASRVADVTWAVVVLLATAYVLWRVMSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVVVLI IAS++W+P+G+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 370 DEVGHVFVLGLITLLRVVVLIAIASVVWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 430 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA+ T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAQMTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583 Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 95/266 (35%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P + + + D F ++ + IG + + D + Sbjct: 7 PNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQSQKISLDPSNLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 T R++ ++ + + G + P +L + P + V+ Sbjct: 67 YALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFF 126 Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L L + W + F+ P D EV+ FH+TGW+ + + Sbjct: 127 LALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKL 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P V + + G W + SE + G+ + G+GAY+AE+ + + V Sbjct: 187 EVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAEAIVERNLGAVGW 246 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 +L M +LA ++ L+ PL + + Sbjct: 247 VILAMTVVILAYDQLLFRPLVAWADK 272 >gi|311279626|ref|YP_003941857.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] gi|308748821|gb|ADO48573.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] Length = 608 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 298/575 (51%), Positives = 402/575 (69%), Gaps = 8/575 (1%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R + PN +D++AF L+I +I +++ G +T +P + I+LD +LP+YA RTTLRM Sbjct: 41 RHLKPNRWDIVAFPLIICLIAMMVTGFNQTMMPIVSLKTQTISLDPANLPEYALRTTLRM 100 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L AM+ +LLFT VY TLAA+SRR +L+PILDI+QS+P+LG+++FTV +F+ L+PG+V+ Sbjct: 101 LVAMIAALLFTLVYGTLAARSRRAEKILIPILDILQSVPVLGYISFTVTFFIALFPGRVL 160 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G ELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPF+MPGL Sbjct: 161 GVELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLVEVSRGFHLTPWQRFWKLDVPFAMPGL 220 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFF+VASE I VG+ LPGIG+Y+A AI +++ AI + +L M VI Sbjct: 221 IWNMMMSMSGGWFFIVASEAITVGNNTFTLPGIGAYLAQAILSKNMHAIGWVLLAMTLVI 280 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 YDQLLFRP++ W++KFR+E T SWVL L R+T + SP Sbjct: 281 LAYDQLLFRPLVAWADKFRMENTRSGSAPTSWVLNLIRRTRLIH-------RLLSPFGFL 333 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + + R + S +R+S ++DI W +V +A+ +AW+ I Y+ + Sbjct: 334 LSGMARIPLHVPLPH-WGAASPRSARRLSRVVDILWGTLVILLALYVAWRVISYVSAGVS 392 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +V +V LG T+ RV VLI+I+S++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 393 LSEVGHVFLLGFATLLRVSVLILISSLVWVPLGVMIGMRPALAGKIQPIAQFLAAFPANL 452 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+ V + ++ LNPN+WLS L++ GTQWYILFNV+AG SA PND++E A++FHI GW+ Sbjct: 453 LFPIFVITIVHFQLNPNIWLSPLIVLGTQWYILFNVVAGTSAIPNDYREAAANFHIRGWQ 512 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR ++LPGIFPYY+TGAITA GGAWNASIV+E WG L G+GAYIA++T G F Sbjct: 513 WWREVMLPGIFPYYITGAITASGGAWNASIVAEFVQWGDTQLTAYGIGAYIAKTTAAGDF 572 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P+++LGV +M FV NR LW PLY Y R+ Sbjct: 573 PKIILGVAVMSLFVTLFNRLLWRPLYAYAESRFRI 607 >gi|83719463|ref|YP_441452.1| ABC transporter permease [Burkholderia thailandensis E264] gi|167580221|ref|ZP_02373095.1| ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167618330|ref|ZP_02386961.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257139872|ref|ZP_05588134.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83653288|gb|ABC37351.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 585 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 312/574 (54%), Positives = 405/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ Sbjct: 258 AYDQFLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ +L +RF P ++ S DI W V + +AW+ Y+ T Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTLYVAWRVFAYVKTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKAQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|167561998|ref|ZP_02354914.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147] Length = 584 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 312/583 (53%), Positives = 414/583 (71%), Gaps = 7/583 (1%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 N + + R+ PN +D +AF L+I +I + G ET P + I+LD +LP+Y Sbjct: 8 NRIANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEY 67 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RTTLRML+AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ Sbjct: 68 ALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L+P +V+GAELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L Sbjct: 128 ALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKLE 187 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +Q+L A+ + Sbjct: 188 VPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDQNLRAVGWV 247 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 +LTM VI YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + Sbjct: 248 ILTMTIVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGW 307 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 FF+ + ++ +L +RF P ++ S + DI W +V I + + Sbjct: 308 FFAKAARIPLRVP-SLDAVRFTMPR------VEKKASRVADIAWAILVIAGTIYVVSRVF 360 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 Y+ T +V +V LG IT+ RV++LI +AS++W+P+G+WIG RP I+ K+QP AQ Sbjct: 361 VYVKTGVTLAEVGHVFVLGLITLLRVMLLIALASLVWVPIGVWIGLRPAIAEKVQPIAQF 420 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+ FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A+ Sbjct: 421 LAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAAT 480 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F I GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG ++ GLGAYIA Sbjct: 481 NFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIQAHGLGAYIA 540 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++T G +P+++LG+ +M FV NR LW PLY Y LRL Sbjct: 541 QTTAAGDYPKIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 583 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 93/266 (34%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P + + + D F ++ V A I + D + Sbjct: 7 PNRIANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 T R++ ++ + + + G + P +L + P + V+ Sbjct: 67 YALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126 Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L L + W + F+ P D EV+ FH+T W+ + + Sbjct: 127 LALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKL 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P + + + G W + SE + G+ + G+GAY+A++ + V Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAISDQNLRAVGW 246 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 +L M +LA ++ L+ PL + + Sbjct: 247 VILTMTIVILAYDQLLFRPLVAWADK 272 >gi|91782448|ref|YP_557654.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91686402|gb|ABE29602.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia xenovorans LB400] Length = 583 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 307/574 (53%), Positives = 404/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICLIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLVFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTIVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + F+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L F Q+ Q+ S + DI W +V + + ++ Y+ + Sbjct: 317 LRLP--------AFQGPRFQIPQMQKSSRVGDIVWAALVLVTTVYVVYRVFMYVRTGVSL 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 DEVWHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W Sbjct: 429 FPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G +P Sbjct: 489 WRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDYP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++++G+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|167569249|ref|ZP_02362123.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 584 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 312/583 (53%), Positives = 414/583 (71%), Gaps = 7/583 (1%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 N + + R+ PN +D +AF L+I +I + G ET P + I+LD +LP+Y Sbjct: 8 NRIANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPEY 67 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RTTLRML+AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ Sbjct: 68 ALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L+P +V+GAELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L Sbjct: 128 ALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKLE 187 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +Q+L A+ + Sbjct: 188 VPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITDQNLRAVGWV 247 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 +LTM VI YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + Sbjct: 248 ILTMTIVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGW 307 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 FF+ + ++ +L +RF P ++ S + DI W +V I + + Sbjct: 308 FFAKAARIPLRVP-SLDAVRFTMPR------VEKKASRVADIAWAILVIAGTIYVVSRVF 360 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 Y+ T +V +V LG IT+ RV++LI +AS++W+P+G+WIG RP I+ K+QP AQ Sbjct: 361 VYVKTGVTLAEVGHVFVLGLITLLRVMLLIALASLVWVPIGVWIGLRPAIAEKVQPIAQF 420 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+ FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A+ Sbjct: 421 LAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAAT 480 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F I GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG ++ GLGAYIA Sbjct: 481 NFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIQAHGLGAYIA 540 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++T G +P+++LG+ +M FV NR LW PLY Y LRL Sbjct: 541 QTTAAGDYPKIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 583 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 93/266 (34%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P + + + D F ++ V A I + D + Sbjct: 7 PNRIANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLGTQKISLDPANLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 T R++ ++ + + + G + P +L + P + V+ Sbjct: 67 YALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126 Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L L + W + F+ P D EV+ FH+T W+ + + Sbjct: 127 LALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTVWQRFWKL 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P + + + G W + SE + G+ + G+GAY+A++ + V Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITDQNLRAVGW 246 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 +L M +LA ++ L+ PL + + Sbjct: 247 VILTMTIVILAYDQLLFRPLVAWADK 272 >gi|330817956|ref|YP_004361661.1| hypothetical protein bgla_1g30970 [Burkholderia gladioli BSR3] gi|327370349|gb|AEA61705.1| hypothetical protein bgla_1g30970 [Burkholderia gladioli BSR3] Length = 584 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 305/583 (52%), Positives = 402/583 (68%), Gaps = 7/583 (1%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 N + + R+ PN +D +AF L++ +I + G ET P + I+LD +LP+Y Sbjct: 8 NRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIGTLSTQKISLDPANLPEY 67 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RTTLRML+AMV SL+FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ Sbjct: 68 ALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFL 127 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L P +V GAELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L Sbjct: 128 ALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTTWQRFWKLE 187 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VPFSMPGLVWNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI ++++ AI + Sbjct: 188 VPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTIILPGIGAYLAQAISDKNIGAIGWV 247 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 +L M VI YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + Sbjct: 248 ILAMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIH-------Q 300 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 P + + R + F ++ S DI W +V + W+ + Sbjct: 301 LLVPAGWLLARAARLPFRLPSFDAARFALPRVEKQASRAADIGWAILVLIGTAYVVWRVV 360 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ T +V +V LG T+ RV+VLI IAS++W+P+G+WIG RP ++ K QP AQ Sbjct: 361 SFVATGVTLAEVGHVFLLGLATLLRVLVLIAIASLVWVPIGVWIGLRPALAEKAQPIAQF 420 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+ FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A+ Sbjct: 421 LAAFPANLLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT 480 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F I GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE+ WG ++ GLGAYI+ Sbjct: 481 NFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSELVQWGDTKIQAHGLGAYIS 540 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 E T G +P++++G+ +M FV NR LW PLY Y LRL Sbjct: 541 EMTAAGDYPKIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRL 583 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 94/266 (35%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P + + + D F ++ V A IG + D + Sbjct: 7 PNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIGTLSTQKISLDPANLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP----LV 437 T R++ ++ + + + G + P +L + P + Sbjct: 67 YALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 ++ + L + W + F+ P D EV+ FH+T W+ + + Sbjct: 127 LALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTTWQRFWKL 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P V + + G W + SE + G+ + G+GAY+A++ + + Sbjct: 187 EVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTIILPGIGAYLAQAISDKNIGAIGW 246 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 +L M +LA ++ L+ PL + + Sbjct: 247 VILAMTVVILAYDQLLFRPLVAWADK 272 >gi|167841086|ref|ZP_02467770.1| ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 585 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 311/574 (54%), Positives = 412/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQKISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+P +V+G Sbjct: 78 AAMVASLAFTLVYGTLAAKSRRAGIVLVPILDILQSVPVLGYISFTVTFFLALFPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIAEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G +RF P ++ S+ DI W +V + W+ +G++ T Sbjct: 318 LRLPLS-GAVRFTLPR------VEKKASFAADIVWAILVLAGTAYVVWRVVGFVSTGVTM 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVV+LI +AS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVVLLIALASVVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ Y LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARYRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE+ WG ++ GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSELVQWGDTRIQAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 >gi|254251726|ref|ZP_04945044.1| ABC-type anion transport system duplicated permease component [Burkholderia dolosa AUO158] gi|124894335|gb|EAY68215.1| ABC-type anion transport system duplicated permease component [Burkholderia dolosa AUO158] Length = 584 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 313/574 (54%), Positives = 409/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFIAFPLIICVIAMAVVGFHETMAPIGTLQAQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADRNLGAVGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G IRF P ++ S + D W VV + W+ ++ T Sbjct: 317 LRLPLS-GAIRFTLPR------VEKKASRVADATWAVVVLVATAYVVWRVFSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V LG IT+ RVVVLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 370 ADVGHVFVLGLITLLRVVVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ ++LN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 430 FPVFVIVIARFNLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 92/266 (34%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P + + + D F ++ V IG + D + Sbjct: 7 PNRTANASAWRVLPNRWDFIAFPLIICVIAMAVVGFHETMAPIGTLQAQKISLDPSNLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 T R++ ++ + + G + P +L + P + V+ Sbjct: 67 YALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126 Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L L + W + F+ P D EV+ FH+T W+ + + Sbjct: 127 LALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P + + + G W + SE + G+ + G+GAY+A++ + V Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADRNLGAVGW 246 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 +L M +LA ++ L+ PL + + Sbjct: 247 VILAMTVVILAYDQLLFRPLVAWADK 272 >gi|187923127|ref|YP_001894769.1| binding-protein-dependent transporters inner membrane component [Burkholderia phytofirmans PsJN] gi|187714321|gb|ACD15545.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 583 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 307/574 (53%), Positives = 405/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICVIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLVYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + + F+ + Sbjct: 257 AYDQFLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L F Q+ Q+ S + D+ W +V + + ++ + Y+ + Sbjct: 317 FRLP--------AFQGPRFQIPQMQKSSRVGDMVWAALVLLATVYVVYRVVIYVRTGVSL 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVVVLI IAS+IW+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 DEVWHVFVLGLITLLRVVVLIAIASVIWVPVGVLIGLRPALAEKIQPIAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W Sbjct: 429 FPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G +P Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDYP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++++G+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|148258661|ref|YP_001243246.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146410834|gb|ABQ39340.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 577 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 332/587 (56%), Positives = 422/587 (71%), Gaps = 11/587 (1%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 M L + + + PNI+D++A ++V+G + ++++G ++TT P +D P++LD + Sbjct: 1 MMLQDFRTAVLRETVRPNIWDVVALIIVVGAMVLIVYGGEQTTQPLSALDTAPVSLDPSN 60 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA RTTLRML A+ SL+FTFVYA LAAKSRR +VL+P+LDI+QS+PILGFLTFTV Sbjct: 61 LPLYALRTTLRMLLAITCSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV 120 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 V+FMNL+PGKV+GAELA +FAIFTSQ WNMTFSMYQS+ N+P+DLEE +RSF LSGWQ+F Sbjct: 121 VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF 180 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 W L VP++MPGL+WN MMSMSGGWFFVVASE I VG+T + LPGIGSY+ALAI+++DL A Sbjct: 181 WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA 240 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 I A+LTML VI YDQLLFRP++ W++KFR E+T P SW+L LFR+T LR Sbjct: 241 IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGDPPSSWMLDLFRRTRALR---- 296 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 LS L R +R ++P + S ++D W VV Sbjct: 297 -------KLSVPFAALNRAFSNLRLNWPTAWSGPVRRAPPSQLVDGLWLAVVVIGCAYAG 349 Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W++ Y+ DVL G IT+ RV VLI +AS+IW+PVG+WIG RP ++ +IQP Sbjct: 350 WKTYLYLSATLAPSDVLSATGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERIQP 409 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 AQ LAAFPAN+ FP+ V + Y LN N+WLS LMI GTQWYILFNVIAGASAFP D + Sbjct: 410 LAQFLAAFPANLAFPVFVVLIVRYGLNANVWLSPLMILGTQWYILFNVIAGASAFPTDLR 469 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 E A+S H+TGWRWW ++LPG+FPYY+TGAITA GG+WNA+IV+EVASWG HL +GLG Sbjct: 470 EAAASLHLTGWRWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLG 529 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 AYIA +TE+G FP VVLG+ +MC V NR LW PLY +G R LRL Sbjct: 530 AYIAAATERGDFPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRL 576 >gi|221209695|ref|ZP_03582676.1| ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221170383|gb|EEE02849.1| ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 596 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 306/574 (53%), Positives = 399/574 (69%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +ET P + I+LD +LP+YA RTTLRML Sbjct: 30 RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKISLDPSNLPEYALRTTLRML 89 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 90 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 149 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+GWQ+FW L VPFSMPGL+ Sbjct: 150 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 209 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI EQ+L A+ + ++ M VI Sbjct: 210 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 269 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E ++ SW+L L R+T + P + Sbjct: 270 AYDQLLFRPLVAWADKFRMENSSAGDAPQSWLLDLLRRTRAIH-------QLLVPAGWLL 322 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + R +R + + + S D W V + + +A + + Y+ T Sbjct: 323 SQAARVPLRLRA-LDAMRARETAQRSPSRFGDFVWAAAVIVLTVYVAARVVSYVSTGVTI 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 382 DDVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE +F I GW+W Sbjct: 442 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIAE T G FP Sbjct: 502 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 562 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 595 >gi|170691899|ref|ZP_02883063.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gi|170143183|gb|EDT11347.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 583 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 309/574 (53%), Positives = 405/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I II + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICIIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI ++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAIVVKNLHAIGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + F+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMETTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L L RF P+ Q+ S + DI W +V + + ++ Y+ + Sbjct: 317 FRLP-ALQAPRFPIPQ-------IQKSSRIGDIVWGALVLVATVYVVYRVFIYVRTGVSL 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 DEVGHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++LNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W Sbjct: 429 FPVFVIVIVRFNLNPDVWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G +P Sbjct: 489 WRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDYP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++++G+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|206563802|ref|YP_002234565.1| ABC transporter permease [Burkholderia cenocepacia J2315] gi|198039842|emb|CAR55817.1| ABC transporter, permease protein [Burkholderia cenocepacia J2315] Length = 584 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 300/574 (52%), Positives = 405/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAVAFPLIICVLAMAIVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAIADKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + S + Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ G ++ S++R S + DI W V + + + W+ + ++ T Sbjct: 318 LRVPSLAG--------TRVRGASSRRSSRIGDIVWGAFVIALTLYVVWRVVSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 370 GEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+W Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T G FP Sbjct: 490 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 97/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 IRF P + + + D F ++ V IG + D Sbjct: 3 IRFFDPNRTANASAWRVLPNRWDAVAFPLIICVLAMAIVGFHETMAPIGVLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ +I + + + G + P +L + P + Sbjct: 63 SNLPEYALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAIADKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V ++ M +LA ++FL+ PL + + Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273 >gi|296159051|ref|ZP_06841878.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295890612|gb|EFG70403.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 583 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 307/574 (53%), Positives = 405/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICLIAMAAIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLVFTLAYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L AI + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTIILPGIGAYLAQAISDKNLHAIGWVILAMTIVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + F+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVPLGWMFAKAARVP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L F Q+ Q+ S + DI W +V + + ++ + Y+ + Sbjct: 317 LRLP--------AFQGPRFQIPQMQKSSRVGDIAWAALVLVTTVYVVYRVVMYVRTGVSL 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RVVVLI +AS++W+PVG+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 DEVWHVFVLGLITLLRVVVLIALASVVWVPVGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A +FHI GW+W Sbjct: 429 FPVFVIAIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAKNFHIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIV+E WG + GLGAYIA+ST G +P Sbjct: 489 WRQAILPGIFPYYVTGAITASGGAWNASIVAEFVQWGDTKVAAHGLGAYIAQSTAAGDYP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++++G+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIIVGIAVMSLFVTLFNRLLWRPMYAYAEAKLRL 582 >gi|115358889|ref|YP_776027.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|115284177|gb|ABI89693.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] Length = 584 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 302/574 (52%), Positives = 403/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G +T P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQSQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR+GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMVASLVFTLVYGTLAAKSRRIGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + S + Sbjct: 258 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQTARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + G + S + S + DI W V + + +AW+ + ++ T Sbjct: 318 LRAPSLAGA--------RSRAASVRGSSRIGDIVWGTFVILITVYVAWRVVSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 370 DEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+W Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 99/271 (36%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------DV 376 IRF P + + + D F ++ G+ + T Q D Sbjct: 3 IRFFDPNRTANASAWRVLPNRWDAVAFPLIIGILAMAIVGFHQTLAPIATLQSQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ ++ + + + G I + P +L + P + Sbjct: 63 SNLPEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRIGMVLIPILDILQSVPVLGYISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTSWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V ++ M +LA ++FL+ PL + + Sbjct: 243 GAVGWVIVAMSVVILAYDQFLFRPLVAWADK 273 >gi|146337816|ref|YP_001202864.1| ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146190622|emb|CAL74624.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. ORS278] Length = 577 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 329/587 (56%), Positives = 428/587 (72%), Gaps = 11/587 (1%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 M L ++ + + PNI+D++A ++V+G + ++++G ++TT+P +D P++LD + Sbjct: 1 MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSN 60 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA RTTLRML A++ SL+FTFVYA LAAKSRR +VL+P+LDI+QS+PILGFLTFTV Sbjct: 61 LPLYALRTTLRMLLAIICSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV 120 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 V+FMNL+PGKV+GAELA +FAIFTSQ WNMTFSMYQS+ N+P+DLEE +RSF LSGWQ+F Sbjct: 121 VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF 180 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 W L VP++MPGL+WN MMSMSGGWFFVVASE I VG+T + LPGIGSY+ALAI+++DL A Sbjct: 181 WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA 240 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 I A+LTML VI YDQLLFRP++ W++KFR E+T P SW+L LFR+T LR Sbjct: 241 IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALR---- 296 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 LS + RT +R ++P+ + + S ++D W V Sbjct: 297 -------SLSIPFAAINRTFSNLRLNWPKAWSGPVRHAPPSQLVDGLWLAAVVVGCAYAG 349 Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W++ Y+ DV I G IT+ RV VLI +AS+IW+PVG+WIG RP ++ ++QP Sbjct: 350 WKTYLYLSTTLAPSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERMQP 409 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 AQ LAAFPAN+ FP+ V + Y LN ++WLS LMI GTQWYILFNVIAGASAFP+D + Sbjct: 410 LAQFLAAFPANLAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDLR 469 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 E A+S H+TGWRWW ++LPG+FPYY+TGAITA GG+WNA+IV+EVASWG HL +GLG Sbjct: 470 EAAASLHLTGWRWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLG 529 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 AYIA +TE+G FP VVLG+ +MC V NR LW PLY +G R LRL Sbjct: 530 AYIAAATERGDFPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRL 576 >gi|254254292|ref|ZP_04947609.1| ABC-type anion transport system duplicated permease component [Burkholderia dolosa AUO158] gi|124898937|gb|EAY70780.1| ABC-type anion transport system duplicated permease component [Burkholderia dolosa AUO158] Length = 584 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 311/574 (54%), Positives = 409/574 (71%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +T P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDAVAFPLIICMLAMAIVGFHQTMAPIGTLQAQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + +L M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRSITLPGIGAYLAQAIADRNLGAVGWVILAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSSGSAPESWLLDLVRRTRLIHQLLVPAGWFFAKAARIP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 +L + G IRF P ++ S + D W VV + W+ ++ T Sbjct: 317 LRLPLS-GAIRFTLPR------VEKKASRVADATWAVVVLVATAYVVWRVFSFVATGVTM 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V LG IT+ RVVVLI IAS+IW+P+G+WIG RP ++ K+QP AQ LAAFPAN+ Sbjct: 370 ADVGHVFVLGLITLLRVVVLIAIASVIWVPIGVWIGLRPALAEKMQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ ++LN ++WLS L++ GTQWYILFNVIAGA+++PND++E A++F I GW+W Sbjct: 430 FPVFVVVIARFNLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 490 WRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTRIEAHGLGAYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY + LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 583 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 92/266 (34%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P + + + D F ++ + IG + D + Sbjct: 7 PNRTAHASAWRVLPNRWDAVAFPLIICMLAMAIVGFHQTMAPIGTLQAQKISLDPSNLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 T R++ ++ + + G + P +L + P + V+ Sbjct: 67 YALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFF 126 Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L L + W + F+ P D EV+ FH+T W+ + + Sbjct: 127 LALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P + + + G W + SE + G+ + G+GAY+A++ + V Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNRSITLPGIGAYLAQAIADRNLGAVGW 246 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 +L M +LA ++ L+ PL + + Sbjct: 247 VILAMTVVILAYDQLLFRPLVAWADK 272 >gi|327396383|dbj|BAK13805.1| glycine betaine/L-proline transport system permease protein ProW [Pantoea ananatis AJ13355] Length = 578 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 299/575 (52%), Positives = 404/575 (70%), Gaps = 9/575 (1%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +RR+ PN++D +AF L+I +I ++ G +T +P D + I+LD +LP+YA RTTLR Sbjct: 11 NRRLLPNVWDAVAFPLIICLIAMVAVGFHQTLMPIDSLKTQAISLDPTNLPEYAMRTTLR 70 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML AM+ SL+F+ +Y TLAAKSRR VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V Sbjct: 71 MLVAMLASLVFSLIYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFIALFPGQV 130 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G ELAAIFA+FTSQ WNMTFS YQSL +P DL EVSR F L+GWQ+FW L PF++PG Sbjct: 131 LGVELAAIFALFTSQAWNMTFSFYQSLRTVPADLVEVSRGFHLTGWQRFWKLDAPFAVPG 190 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 LVWNMMMSMSGGWFF+VASE I VG+ LPG+G Y+A AI +D+ A+ + +LTM+ V Sbjct: 191 LVWNMMMSMSGGWFFIVASEAITVGNNTFTLPGVGGYLAQAILHKDIHAVGWVLLTMVIV 250 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I YDQLLFRP++ W++KFR+E T SWV L R+T + I ++ Sbjct: 251 ILAYDQLLFRPLVAWADKFRMENTRSGNAPTSWVRDLMRRTRLIHQI-FTPLRLLLSALA 309 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + T +RF + +R S + DI W V + + + ++ I Y+ Sbjct: 310 RISWRWPTAAPVRFE--------NNTRRASRLGDIVWGAFVILLTLYVVYRVITYVQIGV 361 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T +V +V LG IT+ RV VLI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN Sbjct: 362 TLDEVKHVFTLGLITLLRVTVLILISSLIWVPLGVMIGLRPALAGKIQPVAQFLAAFPAN 421 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP+ V + ++HLNP++WLS L++ GTQWYILFNV+AG +AFPND+KE A++FHI GW Sbjct: 422 LMFPVFVIMIVHFHLNPDIWLSPLIVLGTQWYILFNVVAGTTAFPNDYKEAAANFHIRGW 481 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +WWR ++LPGIFPYY+TGAITA GGAWNASIVSE WG+ + GLGAYIA++T G Sbjct: 482 QWWRQVMLPGIFPYYITGAITASGGAWNASIVSEFVQWGNTQVTAHGLGAYIAQTTAAGD 541 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 FP+++LG+ +M FV NR LW PLY+Y R Sbjct: 542 FPKIILGIAVMSLFVTLFNRLLWRPLYVYAESKFR 576 >gi|291616142|ref|YP_003518884.1| ProW [Pantoea ananatis LMG 20103] gi|291151172|gb|ADD75756.1| ProW [Pantoea ananatis LMG 20103] Length = 578 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 299/575 (52%), Positives = 404/575 (70%), Gaps = 9/575 (1%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +RR+ PN++D +AF L+I +I ++ G +T +P D + I+LD +LP+YA RTTLR Sbjct: 11 NRRLLPNVWDAVAFPLIICLIAMVAVGFHQTLMPIDSLKTQAISLDPTNLPEYAMRTTLR 70 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML AM+ SL+F+ +Y TLAAKSRR VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V Sbjct: 71 MLVAMLASLVFSLIYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFIALFPGQV 130 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G ELAAIFA+FTSQ WNMTFS YQSL +P DL EVSR F L+GWQ+FW L PF++PG Sbjct: 131 LGVELAAIFALFTSQAWNMTFSFYQSLRTVPADLVEVSRGFHLTGWQRFWKLDAPFAVPG 190 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 LVWNMMMSMSGGWFF+VASE I VG+ LPG+G Y+A AI +D+ A+ + +LTM+ V Sbjct: 191 LVWNMMMSMSGGWFFIVASEAITVGNNTFTLPGVGGYLAQAILHKDIHAVGWVLLTMVIV 250 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I YDQLLFRP++ W++KFR+E T SWV L R+T + I ++ Sbjct: 251 ILAYDQLLFRPLVAWADKFRMENTRSGNAPTSWVRDLMRRTRLIHQI-FTPLRLLLSALA 309 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + T +RF + +R S + DI W V + + + ++ I Y+ Sbjct: 310 RISWRWPTAAPVRFE--------NNTRRASRLGDIVWGAFVILLTLYVVYRVITYVQIGV 361 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T +V +V LG IT+ RV VLI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN Sbjct: 362 TLNEVKHVFTLGLITLLRVTVLILISSLIWVPLGVMIGLRPALAGKIQPVAQFLAAFPAN 421 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP+ V + ++HLNP++WLS L++ GTQWYILFNV+AG +AFPND+KE A++FHI GW Sbjct: 422 LMFPVFVIMIVHFHLNPDIWLSPLIVLGTQWYILFNVVAGTTAFPNDYKEAAANFHIRGW 481 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +WWR ++LPGIFPYY+TGAITA GGAWNASIVSE WG+ + GLGAYIA++T G Sbjct: 482 QWWRQVMLPGIFPYYITGAITASGGAWNASIVSEFVQWGNTQVTAHGLGAYIAQTTAAGD 541 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 FP+++LG+ +M FV NR LW PLY+Y R Sbjct: 542 FPKIILGIAVMSLFVTLFNRLLWRPLYVYAESKFR 576 >gi|78061821|ref|YP_371729.1| ABC anion transporter, fused inner membrane subunits [Burkholderia sp. 383] gi|77969706|gb|ABB11085.1| ABC anion transporter, fused inner membrane subunits [Burkholderia sp. 383] Length = 583 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 301/574 (52%), Positives = 402/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +T P ++ I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIGVLQTQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGWVIVAMSVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQ LFRP++ W++KFR+E T SW+L + R+T+ + + + S + Sbjct: 257 AYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARIP 316 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + G + S++ S + DI W V + + + W+ + ++ T Sbjct: 317 LRFPSMKG--------TRARGASSRSSSRIGDIVWGTFVILLTVYVVWRVVTFVATGVTM 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RV+VLI IAS+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 GEVGHVLVLGLITLLRVLVLIAIASVIWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+W Sbjct: 429 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G FP Sbjct: 489 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGAYIAQTTAAGDFP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIILGIAVMSLFVTLFNRVLWRPMYAYAESRLRL 582 Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 94/266 (35%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P + + + D F ++ + IG + D + Sbjct: 7 PNRTANASAWRVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIGVLQTQKISLDPSNLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 T R++ ++ + + + G + P +L + P + V+ Sbjct: 67 YALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFF 126 Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L L + W + F+ P D EV+ FH+T W+ + + Sbjct: 127 LALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKL 186 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P + + + G W + SE + G+ + G+GAY+A++ + V Sbjct: 187 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDKNLGAVGW 246 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 ++ M +LA ++FL+ PL + + Sbjct: 247 VIVAMSVVILAYDQFLFRPLVAWADK 272 >gi|186476907|ref|YP_001858377.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184193366|gb|ACC71331.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 584 Score = 564 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 309/586 (52%), Positives = 405/586 (69%), Gaps = 8/586 (1%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 F N + R+ PN +D +AF L+I +I + + G ET P + PI+LD +L Sbjct: 6 FTLNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPISTLQNAPISLDPANL 65 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P+YA RTTLRML+AMV SL+FT VY TLAAKSRR G VLVPILDI+QS+P+LG+++FTV Sbjct: 66 PEYALRTTLRMLAAMVASLVFTLVYGTLAAKSRRAGQVLVPILDILQSVPVLGYISFTVT 125 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F+ L+P +V+GAELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVS+ F L+ WQ+FW Sbjct: 126 FFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSKGFHLTSWQRFW 185 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+ I LPG+GSY+A AI E++L AI Sbjct: 186 KLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGMGSYLAQAIAEKNLHAI 245 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 + +LTM VI YDQ LFRP++ W++KFR+E T+ +SW+L L R+T + + Sbjct: 246 GWVILTMTVVILAYDQFLFRPLVAWTDKFRMENTSSGDAPESWLLDLIRRTRLIHRLLVP 305 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 F+ + + R +G +RF P + S DI W +V V + + Sbjct: 306 IGWMFAKAARVPIRWPR-VGPVRFAKP-------VEHKPSKTGDIVWSVIVMLVTAFVVY 357 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + + Y+ T +V +V LG +T+ RV +LI +AS++W+PVG+ IG RP ++ K+QP Sbjct: 358 RVVAYVRTGVTLDEVGHVFVLGLLTLLRVTLLIALASVVWLPVGVLIGLRPALAEKVQPL 417 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 AQ LAAFPAN+ FP V + + LNP++WLS L++ GTQWYILFNVIAGASA+PND+KE Sbjct: 418 AQFLAAFPANLLFPAFVLVIVRFDLNPDIWLSPLIVLGTQWYILFNVIAGASAYPNDYKE 477 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A +F I GW+WWR +LPG+FPYYVTGAITA GGAWNASIV+E WG + GLGA Sbjct: 478 AAKNFRIRGWQWWRQAMLPGVFPYYVTGAITASGGAWNASIVAEAVQWGDTKVAAHGLGA 537 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 YIA+ T G +P+++LG+ +M FV NR LW PLY Y LRL Sbjct: 538 YIAQYTAAGDYPKIILGIAVMSLFVSLFNRVLWRPLYAYAESRLRL 583 >gi|254181361|ref|ZP_04887958.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|184211899|gb|EDU08942.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 585 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 311/574 (54%), Positives = 407/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAVAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 Score = 106 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ V A I + D Sbjct: 3 LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435 + T R++ ++ A + G + P +L + P + Sbjct: 63 ANLPEYALRTTLRMLAAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122 Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 ++ + L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M +LA ++ L+ PL + + Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273 >gi|53718680|ref|YP_107666.1| putative ABC transporter membrane protein [Burkholderia pseudomallei K96243] gi|53725139|ref|YP_102518.1| ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67639868|ref|ZP_00438698.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|76811263|ref|YP_332667.1| ABC transporter permease [Burkholderia pseudomallei 1710b] gi|124384265|ref|YP_001028971.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126441907|ref|YP_001058148.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126449210|ref|YP_001081114.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126453617|ref|YP_001065383.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134281122|ref|ZP_01767831.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|166999929|ref|ZP_02265758.1| ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167718626|ref|ZP_02401862.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167737653|ref|ZP_02410427.1| ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167814788|ref|ZP_02446468.1| ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167823241|ref|ZP_02454712.1| ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167851450|ref|ZP_02476958.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167908611|ref|ZP_02495816.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|217420250|ref|ZP_03451756.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|226194385|ref|ZP_03789983.1| ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237811368|ref|YP_002895819.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242315247|ref|ZP_04814263.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254178013|ref|ZP_04884668.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254190761|ref|ZP_04897268.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254199428|ref|ZP_04905794.1| ABC transporter, permease protein [Burkholderia mallei FMH] gi|254205743|ref|ZP_04912095.1| ABC transporter, permease protein [Burkholderia mallei JHU] gi|254258247|ref|ZP_04949301.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254298312|ref|ZP_04965764.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|254357899|ref|ZP_04974172.1| ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|52209094|emb|CAH35035.1| putative ABC transport system, membrane protein [Burkholderia pseudomallei K96243] gi|52428562|gb|AAU49155.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76580716|gb|ABA50191.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|124292285|gb|ABN01554.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126221400|gb|ABN84906.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126227259|gb|ABN90799.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126242080|gb|ABO05173.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134247428|gb|EBA47513.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147749024|gb|EDK56098.1| ABC transporter, permease protein [Burkholderia mallei FMH] gi|147753186|gb|EDK60251.1| ABC transporter, permease protein [Burkholderia mallei JHU] gi|148027026|gb|EDK85047.1| ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|157808237|gb|EDO85407.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157938436|gb|EDO94106.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|160699052|gb|EDP89022.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|217397554|gb|EEC37570.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|225933470|gb|EEH29459.1| ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237506027|gb|ACQ98345.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|238520476|gb|EEP83936.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242138486|gb|EES24888.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|243064050|gb|EES46236.1| ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254216936|gb|EET06320.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 585 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 311/574 (54%), Positives = 407/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 Score = 106 bits (266), Expect = 8e-21, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ V A I + D Sbjct: 3 LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435 + T R++ ++ A + G + P +L + P + Sbjct: 63 ANLPEYALRTTLRMLAAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122 Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 ++ + L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M +LA ++ L+ PL + + Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273 >gi|167918066|ref|ZP_02505157.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 585 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 309/574 (53%), Positives = 405/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMAAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ + LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 Score = 106 bits (266), Expect = 9e-21, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ V A I + D Sbjct: 3 LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435 + T R++ + A + G + P +L + P + Sbjct: 63 ANLPEYALRTTLRMLAAMAAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122 Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 ++ + L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M +LA ++ L+ PL + + Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273 >gi|167900084|ref|ZP_02487485.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167916728|ref|ZP_02503819.1| ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|254196166|ref|ZP_04902590.1| ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|169652909|gb|EDS85602.1| ABC transporter, permease protein [Burkholderia pseudomallei S13] Length = 585 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 310/574 (54%), Positives = 406/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ + LN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFRLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 Score = 106 bits (266), Expect = 9e-21, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ V A I + D Sbjct: 3 LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435 + T R++ ++ A + G + P +L + P + Sbjct: 63 ANLPEYALRTTLRMLAAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122 Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 ++ + L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M +LA ++ L+ PL + + Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273 >gi|221195992|ref|ZP_03569039.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] gi|221202666|ref|ZP_03575685.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221176600|gb|EEE09028.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2] gi|221182546|gb|EEE14946.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD2M] Length = 583 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 307/574 (53%), Positives = 398/574 (69%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +ET P + I LD +LP+YA RTTLRML Sbjct: 17 RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKIALDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+GWQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 NMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI EQ+L A+ + ++ M VI Sbjct: 197 RNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ SW+L L R+T + P + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSAGDAPQSWLLDLLRRTRAIH-------QLLVPAGWLL 309 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + R +R F + + + S D W V + + +A + + Y+ T Sbjct: 310 SQAARVPLRVRA-FDAMRAREKAQRSPSRFGDFVWAAAVIVLTLYVASRVVSYVSTGVTI 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 ADVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE +F I GW+W Sbjct: 429 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIAE T G FP Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582 >gi|161520447|ref|YP_001583874.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189353362|ref|YP_001948989.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160344497|gb|ABX17582.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|189337384|dbj|BAG46453.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 583 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 307/574 (53%), Positives = 398/574 (69%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +ET P + I LD +LP+YA RTTLRML Sbjct: 17 RVVPNRWDAVAFPLIICVLAMAIVGFRETLAPIATLQTQKIALDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT VY TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+GWQ+FW L VPFSMPGL+ Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLNEVSRGFHLTGWQRFWKLEVPFSMPGLI 196 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI EQ+L A+ + ++ M VI Sbjct: 197 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIAEQNLGAVGWVIVAMTVVIL 256 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ SW+L L R+T + P + Sbjct: 257 AYDQLLFRPLVAWADKFRMENTSAGDAPQSWLLDLLRRTRAIH-------QLLVPAGWLL 309 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + R +R + + + S D W V + + +A + + Y+ T Sbjct: 310 SQAARVPLRVRA-LDVMRARDTAQRSPSRFGDFVWAAAVIVLTLYVASRVVSYVSTGVTI 368 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 369 ADVGHVVVLGLITLLRVIVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLL 428 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +HLN ++WLS L++ GTQWYILFNVIAGA+++PND+KE +F I GW+W Sbjct: 429 FPVFVIAIVRWHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYKEATKNFRIRGWQW 488 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIAE T G FP Sbjct: 489 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEAVQWGDTKVVAHGLGAYIAEMTAAGDFP 548 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 549 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 582 >gi|121599465|ref|YP_992337.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|121228275|gb|ABM50793.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] Length = 585 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 310/574 (54%), Positives = 406/574 (70%), Gaps = 7/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P ++ I+LD +L +YA RTTLRML Sbjct: 18 RVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDPANLLEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV +L FT VY TLAAKSRR GMVLVPILDI+QS+P+LG+++FTV +F+ L P +V+G Sbjct: 78 AAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L VPFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQRFWKLEVPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI E++L A+ + +L M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNLGAVGWVILAMTVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + + FF+ L+ Sbjct: 258 AYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLVRRTRLIHQLLVPAGWFFARLARIP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ +L +RF P ++ S DI W V + + W+ Y+ T Sbjct: 318 LRVP-SLDAVRFSMPR------VEKKASRAADIAWAIAVIVGTVYVVWRVFAYVSTGVTL 370 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V LG IT+ RV +LI IAS++W+P+G+WIG RP I+ K+QP AQ LAAFPAN+ Sbjct: 371 AEVGHVFVLGLITLLRVALLIAIASLVWVPIGVWIGLRPAIAEKVQPLAQFLAAFPANLL 430 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V ++ +HLN ++WLS L++ GTQWYILFNVIAGA+A+PND++E A++F I GW+W Sbjct: 431 FPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATAYPNDYREAATNFRIRGWQW 490 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T G +P Sbjct: 491 WRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKIEAHGLGAYIAQTTAAGDYP 550 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW PLY Y LRL Sbjct: 551 KIILGIAVMSLFVTLFNRLLWRPLYAYAEAKLRL 584 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 97/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ V A I + D Sbjct: 3 LGFFDPNRTANASAWRVLPNRWDFVAFPLIICVIAMAAIGFHETMAPIATLETQRISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP- 435 ++ T R++ ++ A + G + P +L + P + Sbjct: 63 ANLLEYALRTTLRMLAAMVAALAFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISF 122 Query: 436 ---LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 ++ + L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALIPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTAWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + + G W + SE + G+ + G+GAY+A++ + + Sbjct: 183 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAIVEKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V +L M +LA ++ L+ PL + + Sbjct: 243 GAVGWVILAMTVVILAYDQLLFRPLVAWADK 273 >gi|134293957|ref|YP_001117693.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] gi|134137114|gb|ABO58228.1| binding-protein-dependent transport systems inner membrane component [Burkholderia vietnamiensis G4] Length = 584 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 302/574 (52%), Positives = 404/574 (70%), Gaps = 8/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IGI+ + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDAVAFPLIIGILAMAIVGFHETMAPIATLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR GMVL+PILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 78 AAMVASLVFTLGYGTLAAKSRRAGMVLIPILDILQSVPVLGYISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDL EVSR F L+ WQ+FW L PFSMPGL+ Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQRFWKLEAPFSMPGLI 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L A+ + ++ M VI Sbjct: 198 WNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADKNLAAVGWVIVAMSVVIL 257 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T SW+L + R+T+ + + + S + Sbjct: 258 AYDQLLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIHQLLVPAGWLLSQAARVP 317 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + + S++R S + D+ W VV + + +AW+ +G++ T Sbjct: 318 LRAP--------SVTLARSRGKSSRRSSRVGDLVWAAVVIALTLYVAWRVVGFVATGVTL 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAAFPAN+ Sbjct: 370 AEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPKLAEKIQPLAQFLAAFPANLL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F I GW+W Sbjct: 430 FPVFVIVIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +LPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T G FP Sbjct: 490 WRQAMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFP 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++LG+ +M FV NR LW P+Y Y LRL Sbjct: 550 KIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 583 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 10/271 (3%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 IRF P + + + D F ++ G+ I + D Sbjct: 3 IRFFDPNRTANASAWRVLPNRWDAVAFPLIIGILAMAIVGFHETMAPIATLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ ++ + + + G + P +L + P + Sbjct: 63 SNLPEYALRTTLRMLAAMVASLVFTLGYGTLAAKSRRAGMVLIPILDILQSVPVLGYISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLSEVSRGFHLTPWQ 182 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + P P + + + G W + SE + G+ + G+GAY+A++ + Sbjct: 183 RFWKLEAPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNRTITLPGIGAYLAQAIADKNL 242 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V ++ M +LA ++ L+ PL + + Sbjct: 243 AAVGWVIVAMSVVILAYDQLLFRPLVAWADK 273 >gi|148252998|ref|YP_001237583.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146405171|gb|ABQ33677.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 585 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 327/587 (55%), Positives = 424/587 (72%), Gaps = 10/587 (1%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 M L ++ ++R PN++DL+A +LVIG + ++++G ++TT+P +D+ P++LD + Sbjct: 8 MRLQDLRLAVLTRAPRPNVWDLIALILVIGAMVLIVYGGKQTTLPLSALDVSPVSLDPAN 67 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA RTTLRML A+ S +FTF+YA +AAKSRR MVL+P+LDI+QS+PILGFLTFTV Sbjct: 68 LPFYALRTTLRMLLAIACSTVFTFIYAAVAAKSRRAEMVLIPLLDILQSVPILGFLTFTV 127 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 V+F+NL+PG+V+GAELA +FAIFTSQ WNMTFSMYQSL N+P+DL+E S+SF LSGWQ+F Sbjct: 128 VFFLNLFPGRVLGAELACVFAIFTSQAWNMTFSMYQSLRNVPKDLDEASKSFHLSGWQRF 187 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 W L VPF+MPGL+WN MMSMSGGWFFVVASE I VG+T + LPG+GSY+ALAI+++DL A Sbjct: 188 WRLDVPFAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGVGSYVALAIEKRDLAA 247 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 I YA+ TML VI +YDQLLFRP++ W++KFR E+T SW+L LFR+T LR + Sbjct: 248 IGYAIFTMLLVIIVYDQLLFRPIVAWADKFRFEQTASGDAPTSWMLDLFRRTRALRALTL 307 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 SN + R L S ++D WF ++ A Sbjct: 308 PFAALNRAFSNLSAEWPRALRP----------SSKPGAPPSRLIDALWFAIIGIATGYAA 357 Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 +++ Y+ + DV + G T+ RV+ LI +A++IW+P+G+WIG RP I+ ++QP Sbjct: 358 YKAYYYLSANLQLSDVYEAVLGGFATLLRVITLIALATLIWVPIGVWIGLRPRIAERVQP 417 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 AQ LAAFPAN+ FP+ V + +Y LN N+WLS LMI GTQWYILFNVIAGASAFP+D + Sbjct: 418 LAQFLAAFPANLAFPVFVLWIVHYGLNSNIWLSPLMILGTQWYILFNVIAGASAFPSDLR 477 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 E A+S H+TGWRWW +ILPGIFPYYVTGAITA GG+WNASIV+EVASWG HL TGLG Sbjct: 478 EAAASLHLTGWRWWIKVILPGIFPYYVTGAITASGGSWNASIVAEVASWGDTHLSATGLG 537 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 AYIA++TE G FP VVLG+ IMC V NR W PLY +G R LRL Sbjct: 538 AYIAKATEDGDFPRVVLGIAIMCIMVTLFNRLFWRPLYAFGERRLRL 584 >gi|315121797|ref|YP_004062286.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495199|gb|ADR51798.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 555 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 423/553 (76%), Positives = 485/553 (87%) Query: 34 ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93 +L +QETTVP DIVDIVPITLDV SLP+YASRTTLRML A+V+SLLFTF+YATLAAKS Sbjct: 1 MLFRSVQETTVPCDIVDIVPITLDVSSLPKYASRTTLRMLIAIVVSLLFTFIYATLAAKS 60 Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 RRLGMVL+PILDIMQSIPILGFLTFTV+YF++LYPG+VIGAE AAIFAIFTSQVWNMTFS Sbjct: 61 RRLGMVLIPILDIMQSIPILGFLTFTVIYFISLYPGRVIGAEFAAIFAIFTSQVWNMTFS 120 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 MYQSLCNIP+DLEEVSRSFRLSGWQKFW L VPFS+PGLVWNMM+SMSGGWFFVVA+EMI Sbjct: 121 MYQSLCNIPKDLEEVSRSFRLSGWQKFWNLDVPFSIPGLVWNMMISMSGGWFFVVAAEMI 180 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 VVGDTVI LPGIGSY+ALAIKE+ L+++LYAMLTM+GVI LYDQLLFRP+I WSNKFRLE Sbjct: 181 VVGDTVISLPGIGSYVALAIKERSLVSVLYAMLTMVGVILLYDQLLFRPIIAWSNKFRLE 240 Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333 RTT ++ +D WVL LFRKTNFLRF+G+SS+ PLS N KL R I+F+FP+N Sbjct: 241 RTTAVHSSDPWVLSLFRKTNFLRFLGHSSYKIILPLSCNFNKLYRLFNYIQFYFPDNLGL 300 Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 N+++SY+LDI WF V +A+GIAW+S YI+++ Y D+LYV WLGCITM RVV+L Sbjct: 301 FSCNKKISYILDIIWFLAVYSIAMGIAWKSFEYIIDNLGYYDILYVFWLGCITMLRVVIL 360 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 IIIA+IIW+P+G+WIG RPHI+SKIQPFAQ LAAFP+N+FFPLVVS + YY LNPN+WLS Sbjct: 361 IIIATIIWVPIGVWIGMRPHIASKIQPFAQFLAAFPSNIFFPLVVSIIFYYDLNPNIWLS 420 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 LMI GTQWYILFN+I+G SAFPNDFKEV SFH+TGW WRY+ILPGIFP+YVTGAITA Sbjct: 421 SLMILGTQWYILFNIISGTSAFPNDFKEVVQSFHVTGWYRWRYVILPGIFPFYVTGAITA 480 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 CGGAWNASIVSEVASWG+I+LR TGLGAYIAESTEKG+FPEV LG+L+MCCFVL LN FL Sbjct: 481 CGGAWNASIVSEVASWGNIYLRATGLGAYIAESTEKGNFPEVALGILVMCCFVLFLNIFL 540 Query: 574 WHPLYLYGTRCLR 586 W PLY Y R LR Sbjct: 541 WRPLYRYSARHLR 553 >gi|312115324|ref|YP_004012920.1| binding-protein-dependent transporters inner membrane component [Rhodomicrobium vannielii ATCC 17100] gi|311220453|gb|ADP71821.1| binding-protein-dependent transport systems inner membrane component [Rhodomicrobium vannielii ATCC 17100] Length = 583 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 305/574 (53%), Positives = 389/574 (67%), Gaps = 11/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 + +PN +D++ F+ + ++ + HG + P + P++LD +LPQYA TTLRM Sbjct: 21 QAWPNRYDVVVFLALGAVLVAMAHGAKTMQQPLTGLAANPVSLDPANLPQYALLTTLRMF 80 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A+ SLLFTF+ A LAAKSR+ V++P LDI+QS+P+LGFLTFTVV+F+NL+PG IG Sbjct: 81 AALGFSLLFTFIVAPLAAKSRKAERVIIPALDILQSVPVLGFLTFTVVFFLNLFPGSQIG 140 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIFAIFTSQ WNMTFS YQSL +PRDLEEV+ FRL+ WQ+FW L VPF+ PGLV Sbjct: 141 AELAAIFAIFTSQAWNMTFSFYQSLKTVPRDLEEVTEQFRLTPWQRFWKLEVPFATPGLV 200 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VGDT I LPGIGSYIALAI+++++ A+ +A+ M VI Sbjct: 201 WNMMMSMSGGWFFVVASEAISVGDTTITLPGIGSYIALAIEQKNIGAVAWAVGAMGVVIV 260 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 LYDQLLFRP++ WS+KFR+E P +SWVL L R+T ++ + V Sbjct: 261 LYDQLLFRPIVAWSDKFRVELVASQNPPESWVLNLLRRTRLIQAVNGLLGRIAGLFGGGV 320 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R R + LDI + V+ V + AW Y+ + Sbjct: 321 STLSRHAPEPRI-----------GKTAGRALDILFNIVLAAVVVWAAWSIYSYVRATLGW 369 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 DV+ + GCIT RV+VLI IAS+IW+PVG++IG RP ++ +IQP AQ LAAFPANV Sbjct: 370 SDVVQAVTDGCITFVRVMVLIAIASLIWVPVGVYIGLRPKLAERIQPLAQFLAAFPANVL 429 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP VV + + L+PN+WLS L+I GTQWYILFNVIAGAS FP D E + + + GW W Sbjct: 430 FPFVVMGIVAWKLDPNIWLSPLIILGTQWYILFNVIAGASVFPRDLGEASELYRLKGWLW 489 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ++LP I PYYVTGA+TA GG+WNASIV+E SWG + GLGAYIA++T G F Sbjct: 490 WRKVMLPSILPYYVTGALTASGGSWNASIVAEAVSWGDTKVEAQGLGAYIADATAAGDFH 549 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 VVLGV +M FV+ALNR LW LY Y R LR+ Sbjct: 550 RVVLGVGVMSVFVVALNRVLWRRLYAYADRRLRI 583 >gi|294637815|ref|ZP_06716088.1| ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] gi|291089055|gb|EFE21616.1| ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] Length = 578 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 291/570 (51%), Positives = 396/570 (69%), Gaps = 9/570 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++AF L+I +I ++ G +T P ++ I+L +LP+YA RTTLRML AM Sbjct: 16 PNRWDVVAFPLIISLIAMMAIGFHQTLQPLASLEKQSISLAPAALPEYALRTTLRMLVAM 75 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + SLLFT +Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G EL Sbjct: 76 LASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFVALFPGRVLGVEL 135 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNMTFS YQSL +P DL+EV+R +GWQ+FW L PF+MPGL+WNM Sbjct: 136 AAIFAIFTSQAWNMTFSFYQSLRTVPSDLDEVARGLHFTGWQRFWKLDAPFAMPGLIWNM 195 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFF+VASE I VG T LPGIG+Y+A AI ++DL AI + +LTM+ VI YD Sbjct: 196 MMSMSGGWFFIVASEAITVGHTHFVLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILAYD 255 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR+E T P SW+ L R+T+ F+PL + L Sbjct: 256 QLLFRPLVAWADKFRMETTRSATPPTSWLFNLLRRTHLFH-------RLFAPLGQLLGWL 308 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R L++ + R+ +D W + + + ++ + Y+ + + +V Sbjct: 309 ARLPLRCPRRR--PTLKVATPSRIGPTIDRLWGGAILLLTLYLSVRVGAYVQSGVSLHEV 366 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +V LG IT+ RV +LI+I+S+IW+P+G+ IG RP +++KIQP AQ LAAFPAN+ FP+ Sbjct: 367 GHVFLLGLITLLRVSLLILISSLIWVPLGVLIGLRPALAAKIQPLAQFLAAFPANLLFPV 426 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + ++ L+P++WLS L++ GTQWYILFNV+AG +FPND++E A++FHI GW+WWR Sbjct: 427 FVIVIVHFRLDPDIWLSPLIVLGTQWYILFNVVAGTMSFPNDYREAAANFHIHGWQWWRQ 486 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP +FPYYVTGAITA GGAWNASIV+E WG L GLGAYIAE+T G+FP ++ Sbjct: 487 IMLPAVFPYYVTGAITAAGGAWNASIVAEYVQWGDTRLIAHGLGAYIAENTASGNFPHII 546 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 LG+ +M FV NR LW PLY Y R Sbjct: 547 LGIAMMALFVTLFNRLLWRPLYAYAETRFR 576 >gi|241761115|ref|ZP_04759204.1| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374734|gb|EER64195.1| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 584 Score = 544 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 303/579 (52%), Positives = 398/579 (68%), Gaps = 11/579 (1%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P F I PNI+DL+AF L+ G I +++HG + + +++ PI+L + LP+YA R Sbjct: 15 PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+ Sbjct: 75 TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L PF Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++ AI A+L Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ +I LY+QLLFRP++ W+ KF++E++T +SWV + R T ++ Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSTSKEKVNSWVYDIIRHTRLIKR---------- 304 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 LS + + L +IRF EN + ++ S + D W V + W + Y+ Sbjct: 305 -LSTPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGFCVLSAILWGGWVTFDYL 363 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 ++QDV G +T+ RV VLI++AS++W+PVGIWIG RP ++ IQP AQ LAA Sbjct: 364 RQALSWQDVWISFSCGLMTLLRVAVLIMLASLLWVPVGIWIGLRPSLAQHIQPIAQFLAA 423 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPANV FP VV + NPN+WLS LMI GTQWYILFNVIAGA++FP D KE + + Sbjct: 424 FPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVYQ 483 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 I W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+ L GLGAYIA +T Sbjct: 484 IRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANAT 543 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 G VVLG+++M FV NR LW PLY + R +R Sbjct: 544 TAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582 >gi|283856284|ref|YP_162306.2| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis ZM4] gi|283775280|gb|AAV89195.2| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis ZM4] Length = 584 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 302/579 (52%), Positives = 397/579 (68%), Gaps = 11/579 (1%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P F I PNI+DL+AF L+ G I +++HG + + +++ PI+L + LP+YA R Sbjct: 15 PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+ Sbjct: 75 TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L PF Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++ AI A+L Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ +I LY+QLLFRP++ W+ KF++E++ +SWV + R T ++ Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSASKEKVNSWVYDIIRHTRLIKR---------- 304 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 LS + + L +IRF EN + ++ S + D W V + W + Y+ Sbjct: 305 -LSAPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGFCVLSAILWGGWVTFDYL 363 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 ++QDV G +T+ RV VLI++AS++W+PVGIWIG RP ++ IQP AQ LAA Sbjct: 364 RQALSWQDVWISFSCGLMTLLRVAVLILLASLLWVPVGIWIGLRPSLAQHIQPIAQFLAA 423 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPANV FP VV + NPN+WLS LMI GTQWYILFNVIAGA++FP D KE + + Sbjct: 424 FPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVYQ 483 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 I W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+ L GLGAYIA +T Sbjct: 484 IRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANAT 543 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 G VVLG+++M FV NR LW PLY + R +R Sbjct: 544 TAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582 >gi|288961668|ref|YP_003451978.1| binding-protein-dependent transport systems inner membrane component [Azospirillum sp. B510] gi|288913948|dbj|BAI75434.1| binding-protein-dependent transport systems inner membrane component [Azospirillum sp. B510] Length = 586 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 297/576 (51%), Positives = 402/576 (69%), Gaps = 2/576 (0%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 + PN +D++A LVIG++ +L G + +P ++ VPITLD LP+YA R+TLR Sbjct: 12 ATDATPNRWDVVALPLVIGLLALLAIGGHQMALPLGSIEEVPITLDPWMLPEYALRSTLR 71 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML+AM SLLFTF YATLAAKSRR GM+L+P+LD++QS+P+LG+++FTVV+F++L+PG V Sbjct: 72 MLAAMAASLLFTFTYATLAAKSRRAGMLLIPVLDVLQSVPVLGYISFTVVFFLSLFPGSV 131 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +GAE AAIFAIFTSQ WNM FS YQSL +PRDL+E + F SGWQ+FW L P++ PG Sbjct: 132 LGAECAAIFAIFTSQAWNMAFSFYQSLRTVPRDLDEAATGFGFSGWQRFWTLEAPYAAPG 191 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 LVWNMMMSMSGGWFFVVASE I VGD I LPGIGSY+A AI Q L A+ +A+L ML V Sbjct: 192 LVWNMMMSMSGGWFFVVASEAITVGDKTITLPGIGSYLAKAIDGQRLDAVGWAVLAMLLV 251 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I YDQLLFRP++ W++KFR+E T +SW+L LF++T F R I + L Sbjct: 252 ILAYDQLLFRPLVAWADKFRVELTGAQEVPESWLLTLFQRTRFFRAIFAPFDSLLGRLIW 311 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 +L + ++ + +D+ W+ ++ + W + +I + Sbjct: 312 L--RLPTGGLGRGAAGGLRSVGGLLDRVPARAVDMGWYLLLAVTGLWAGWSMVVFIASGV 369 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + DV V+ LG T+ RV+VLI +A+++W+P+G+ IG RP ++ K+QP AQ LAAFPAN Sbjct: 370 AWGDVGTVLLLGGATLLRVLVLIALATLVWVPLGVLIGLRPRLAEKVQPVAQFLAAFPAN 429 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + FP+ V + + LNP++WLS LMI GTQWYILFNV+AGA+AFP+D KE A++F I GW Sbjct: 430 LLFPVAVVVIVRFDLNPDIWLSPLMILGTQWYILFNVVAGATAFPSDLKEAAANFRIRGW 489 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +WWR ++LPG+FPYYVTGA+TA GG+WNASIV+E +WG L GLG+YIA++T G Sbjct: 490 QWWRDVMLPGVFPYYVTGAVTASGGSWNASIVAEAVNWGDTQLTAHGLGSYIAQATTAGD 549 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P +VLG+ +M FV+ NR LW PLY + R LRL Sbjct: 550 YPRIVLGIAVMSLFVILFNRLLWRPLYAFAERRLRL 585 >gi|260752921|ref|YP_003225814.1| binding-protein-dependent transporters inner membrane component [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552284|gb|ACV75230.1| binding-protein-dependent transport systems inner membrane component [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 584 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 303/579 (52%), Positives = 398/579 (68%), Gaps = 11/579 (1%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P F I PNI+DL+AF L+ G I +++HG + + +++ PI+L + LP+YA R Sbjct: 15 PAFSRVPILPNIYDLVAFTLLGGAIALVVHGTSDMSGSLALLEKQPISLGIGHLPEYALR 74 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM + ++ISL+FTFV AT AAK+RR G ++VP +DI+QS+P+LGFLTFTV +F+ L+ Sbjct: 75 TTLRMFAGILISLVFTFVVATFAAKNRRAGQIIVPAMDILQSVPVLGFLTFTVTFFLRLF 134 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ IGAE A+IFAIFTSQVWNM FS YQSL +IP DL+EV RSF+LS WQ+FW L PF Sbjct: 135 PGQEIGAECASIFAIFTSQVWNMAFSFYQSLTSIPTDLDEVCRSFKLSAWQRFWRLEAPF 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + PGL+WN MMSMSGGWFFVVASE I VG+T I LPGIGSY+ALAI E++ AI A+L Sbjct: 195 AAPGLIWNTMMSMSGGWFFVVASEAITVGNTDIRLPGIGSYLALAIDEKNFSAIAAAVLA 254 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M+ +I LY+QLLFRP++ W+ KF++E++T +SWV + R T ++ Sbjct: 255 MVVIILLYNQLLFRPILAWAEKFKVEQSTSKEKVNSWVYDIIRHTRLIKR---------- 304 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 LS + + L +IRF EN + ++ S + D W V + W + Y+ Sbjct: 305 -LSAPFLWIGQQLMMIRFSSAENQVNPANSDTHSKIGDYVWGLCVLSAILWGGWVTFDYL 363 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 ++QDV G +T+ RV VLI++AS++W+PVGIWIG RP ++ IQP AQ LAA Sbjct: 364 RQALSWQDVWISFSCGLMTLLRVAVLILLASLLWVPVGIWIGLRPSLAQHIQPIAQFLAA 423 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPANV FP VV + NPN+WLS LMI GTQWYILFNVIAGA++FP D KE + + Sbjct: 424 FPANVLFPFVVIAIVVTGANPNIWLSPLMILGTQWYILFNVIAGAASFPTDLKEAVAVYQ 483 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 I W WWR ++LPGIFPYY+TGA+TA GG+WNASIV+EVASWG+ L GLGAYIA +T Sbjct: 484 IRSWTWWRRVMLPGIFPYYITGALTATGGSWNASIVAEVASWGNTQLEAYGLGAYIANAT 543 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 G VVLG+++M FV NR LW PLY + R +R Sbjct: 544 TAGDVRRVVLGIVVMAFFVTFFNRILWRPLYAFAERRIR 582 >gi|269140443|ref|YP_003297144.1| binding-protein-dependent transport system inner membrane component [Edwardsiella tarda EIB202] gi|267986104|gb|ACY85933.1| binding-protein-dependent transport system inner membrane component [Edwardsiella tarda EIB202] gi|304560235|gb|ADM42899.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Edwardsiella tarda FL6-60] Length = 579 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 294/585 (50%), Positives = 399/585 (68%), Gaps = 12/585 (2%) Query: 5 NILPPFISRRIF--PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62 +I PP + PN +D++AF L+I +I ++ G + P ++ I+L +LP Sbjct: 2 DIRPPGSHGPLSLNPNRWDIVAFPLIISLIAMMAIGFHQALQPLASLEKQTISLAPSALP 61 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 YA RTTLRML AM+ SLLFT +Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTV + Sbjct: 62 DYALRTTLRMLVAMLASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTF 121 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F+ L+PG+V+G ELAAIFAIFTSQ WNMTFS YQSL +P DL+EV+R + WQ+FW Sbjct: 122 FIALFPGRVLGVELAAIFAIFTSQAWNMTFSFYQSLRTVPGDLDEVARGLHFTSWQRFWK 181 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 L VPF+MPGL+WNMMMSMSGGWFF+VASE I VG+T LPGIG+Y+A AI ++DL AI Sbjct: 182 LDVPFAMPGLIWNMMMSMSGGWFFIVASEAITVGNTHFTLPGIGAYLAEAILQRDLHAIG 241 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302 + +LTM+ VI +YDQLLFRP++ W++KFR+E T P SW+L L Sbjct: 242 WVLLTMVAVILIYDQLLFRPLVAWADKFRMENTRTANPPTSWLLNLL-------RRTRLF 294 Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ-RVSYMLDIFWFCVVCGVAIGIAW 361 +PL + + L R +R+ P + + R S LD+ W V + + + Sbjct: 295 HRLLAPLGHLLGWLARL--PLRWPGPARYRPAPTTPGRSSRYLDLLWGAAVLVLTLYLCT 352 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + + Y+ + + +V YV+ +G +T+ RV +LI+I+S+IW+P+G+ IG RP ++ KIQP Sbjct: 353 RVVLYVRSGVSLHEVGYVLLMGLVTLLRVSLLILISSLIWVPLGVLIGLRPALAGKIQPL 412 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 AQ LAAFPAN+ FP V + ++ LNP++WLS L++ GTQWYILFNV+AG FPND++E Sbjct: 413 AQFLAAFPANLLFPAFVIAIMHFQLNPDIWLSPLIVLGTQWYILFNVVAGTMNFPNDYRE 472 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 V ++ HI GW+WWR I+LP IFPYYVTGA+TA GGAWNASIV+E WG + GLGA Sbjct: 473 VTANLHIRGWQWWRQIMLPAIFPYYVTGAVTAAGGAWNASIVAEYVQWGDTRVAAHGLGA 532 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 YIAE+T G+FP+++LG+ IM FV NR LW PLY Y R Sbjct: 533 YIAENTASGNFPKIILGIAIMSLFVTLFNRLLWRPLYAYAESRFR 577 >gi|34499738|ref|NP_903953.1| nitrate ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34105589|gb|AAQ61943.1| probable ABC transporter nitrate permease [Chromobacterium violaceum ATCC 12472] Length = 564 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 309/573 (53%), Positives = 410/573 (71%), Gaps = 10/573 (1%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + PN +DL+AF L++G + + GI+ET P + PI+L+ +LP+YA RTTLRML+ Sbjct: 1 MIPNRWDLIAFPLILGFLLMATTGIRETWAPITALQTAPISLEPGNLPEYALRTTLRMLA 60 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 AM SL FT VY TLAAKSRR G++LVPILDI+QS+P+LG+++FTV +F+ L+PG+V+GA Sbjct: 61 AMAASLAFTLVYGTLAAKSRRAGLLLVPILDILQSVPVLGYISFTVTFFLALFPGRVLGA 120 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIFTSQ WNMTFS YQSL +PRDL+EVS + RL+ WQKFW L VP++MPG++W Sbjct: 121 EFAAIFAIFTSQAWNMTFSFYQSLRTVPRDLQEVSVNLRLTAWQKFWKLEVPYAMPGMIW 180 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSGGWFFVVASE I VGD + LPG+GSY+ALAI+ +DL A+ + +LTM VI + Sbjct: 181 NMMMSMSGGWFFVVASEAITVGDKTVMLPGVGSYLALAIQHKDLAAVGWVILTMSVVILI 240 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQ LFRP++ W++KFRLE T +SWVL L ++T F++ P +K Sbjct: 241 YDQFLFRPLVAWADKFRLEDTASQNAPESWVLNLIQRTRFIQ-------QLLKPFGKLLK 293 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 R I L ++ VS +D+ W+ +V +A+ A + + +I Sbjct: 294 TAARLRLNISL---PKGLHSEAHTPVSRGIDVLWWALVGLIAVAAASKLVHFIATEVGAW 350 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 +VL V LG +T+ RV +LI IAS+IW+P+G+ IG RP ++ K+QP AQ LAAFPAN+ F Sbjct: 351 EVLKVFGLGLVTLVRVSLLIAIASLIWVPLGVLIGLRPALAEKVQPLAQFLAAFPANLLF 410 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P+ V +++Y LNP++WLS L++ GTQWYILFNVIAGA+AFPNDFKE A++F I GW+WW Sbjct: 411 PVFVIVIAHYKLNPDIWLSPLIVLGTQWYILFNVIAGATAFPNDFKEAAANFRIRGWQWW 470 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 R ++LPGIFPYYVTGAITA GGAWNASIVSE SWG L GLGAYIA++T G +P+ Sbjct: 471 RKVMLPGIFPYYVTGAITASGGAWNASIVSEFVSWGDDKLAAHGLGAYIAQTTAAGDYPK 530 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++LG+ +M FV+ NR LW P+Y LRL Sbjct: 531 ILLGIAVMSLFVVLFNRLLWRPMYAIAENKLRL 563 >gi|188591808|ref|YP_001796407.1| putative Binding-protein-dependent transporter, inner membrane component [Cupriavidus taiwanensis] gi|170939203|emb|CAP64246.1| putative Binding-protein-dependent transporter, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 578 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 309/579 (53%), Positives = 407/579 (70%), Gaps = 11/579 (1%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P +RR+ PN +D +A L+IG++ + GI+ET P I+LD LP+YA RT Sbjct: 10 PGTARRLLPNRWDFIALPLIIGLLVVAASGIRETLAPLAGPSAEAISLDPAMLPEYALRT 69 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TLRML+A+ SLLFTF Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTVV+F+ L+P Sbjct: 70 TLRMLAALAASLLFTFTYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVVFFLALFP 129 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G+++GAELAAIFAIFTSQ WNMTFS YQSL +P DL EVS S RL+ WQKFW L VPF+ Sbjct: 130 GRMLGAELAAIFAIFTSQAWNMTFSFYQSLRTLPPDLIEVSNSMRLTPWQKFWKLEVPFA 189 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 MPGL+WNMMMSMSGGWFFVVASE I VGD I LPG+G+++A AI + ++ A+ + +L M Sbjct: 190 MPGLIWNMMMSMSGGWFFVVASEAITVGDKSITLPGVGAFLATAIADSNMAAVGWVILAM 249 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 + VI LYDQ LFRPM+ W+++FRLE T+ SWVL L +T+ ++ Sbjct: 250 IAVIVLYDQFLFRPMVAWADRFRLESTSAQTAPQSWVLNLVHRTHLIQ-----------S 298 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 L +L R L RF ++ ++D+ W +V +A + W+++ Y+ Sbjct: 299 LLRTFGRLLRKLARARFAVQLPAASGPQRAGLARVVDVVWSLLVAVLAGYLLWRTVSYVH 358 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 +V+ VI LG +T+ RV+VLI++ S+IW+PVG+ IG RP ++ KIQP AQ LAAF Sbjct: 359 TEAGLDEVVKVIGLGLLTLLRVLVLIVLTSLIWVPVGVMIGLRPRLAEKIQPLAQFLAAF 418 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PAN+ FP+ V + ++HLNP++WLS L++ G QWYILFNVIAGA+AFPNDF+E A++F I Sbjct: 419 PANLLFPVFVFGIVHFHLNPDIWLSPLIVLGVQWYILFNVIAGATAFPNDFREAATNFRI 478 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 GW+WWR I+LPGIFPYYVTGAITA GGAWNASIVSE SWG L GLGAYIA+ST Sbjct: 479 RGWQWWRQIMLPGIFPYYVTGAITASGGAWNASIVSEAVSWGSTSLSAHGLGAYIAQSTA 538 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G +P++VLG+ +M V+ NRFLW PLY LR+ Sbjct: 539 AGDYPKIVLGIAVMSIMVVCFNRFLWRPLYAIAESKLRM 577 >gi|158424701|ref|YP_001525993.1| putative ABC transporter nitrate permease [Azorhizobium caulinodans ORS 571] gi|158331590|dbj|BAF89075.1| putative ABC transporter nitrate permease [Azorhizobium caulinodans ORS 571] Length = 582 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 311/582 (53%), Positives = 408/582 (70%), Gaps = 11/582 (1%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 + RR F FDL AF+LV G+ + G Q+T +P ++ PI+L LP+YA Sbjct: 11 VTTTRDPRRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPISLSPWDLPEYA 70 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 RTTLRML+A+V SL+FTF+Y LAAKSRR MVL+P+LDI+QS+P+LGFL+FTV++FMN Sbjct: 71 LRTTLRMLAAIVASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGFLSFTVLFFMN 130 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L+PGKVIG E+AA+FAIFTSQ WNMTFS YQSL +PRDL EVSR FRL+GWQ+FW L V Sbjct: 131 LFPGKVIGVEMAAVFAIFTSQAWNMTFSFYQSLKTLPRDLVEVSRGFRLTGWQRFWRLEV 190 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 PFSMPGLVWN MMSMSGGWFFVVASE I VG+T I LPGIG+Y++ AI E++L A+ +++ Sbjct: 191 PFSMPGLVWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAERNLTAVAWSV 250 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 ML +I +YDQLLFRP++ W+++FR E++ G P SWVL + ++ + R Sbjct: 251 GAMLVIILIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLFRL-------- 302 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L + V L R L + P + S +D W +V +A+ W + Sbjct: 303 ---LLSPVGGLFRGLAALPLRLPVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVS 359 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 ++ +V +V WLG +T+ RV VLI +AS+IW+PVG+WIG RP +++ +QP AQ L Sbjct: 360 FVATEVGLAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGVWIGLRPKVANALQPVAQFL 419 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AAFPAN+ FP V + L+PN+WLS LM+ GTQWYILFNVIAGASAFPND KE ASS Sbjct: 420 AAFPANIVFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASS 479 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 FH+ G +WW +ILPG+FPYYVTGA+TA GG+WNASIV+EVASWG LR GLG+YIA+ Sbjct: 480 FHLRGAQWWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIAD 539 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +T +P + LG+ +M +V+A NR LW PL+ + + LRL Sbjct: 540 ATTAADYPRITLGIAVMSLYVIAFNRTLWRPLFDFAAKRLRL 581 >gi|238921314|ref|YP_002934829.1| nitrate/sulfonate/bicarbonate ABC transporter [Edwardsiella ictaluri 93-146] gi|238870883|gb|ACR70594.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Edwardsiella ictaluri 93-146] Length = 578 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 290/570 (50%), Positives = 391/570 (68%), Gaps = 9/570 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D++AF L+I +I ++ G + P + I+L +LP YA RTTLRML AM Sbjct: 16 PNRWDIVAFPLIISLIAMMAIGFHQALQPLASLGKQSISLAPDALPDYALRTTLRMLLAM 75 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + SLLFT +Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTV +F+ L+PG+V+G EL Sbjct: 76 LASLLFTLIYGTLAAKSRRAAKVLVPMLDILQSVPVLGYISFTVTFFIALFPGRVLGVEL 135 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNMTFS YQSL +P DL+EV+R +GWQ+FW L VPF+MPGL+WNM Sbjct: 136 AAIFAIFTSQAWNMTFSFYQSLRTVPGDLDEVARGLHFTGWQRFWKLDVPFAMPGLIWNM 195 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFF+VASE I VG+T LPGIG+Y+A AI ++DL AI + +LTM+ VI +YD Sbjct: 196 MMSMSGGWFFIVASEAITVGNTHFTLPGIGAYLAEAILQRDLHAIGWVLLTMVAVILIYD 255 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+++FR+E T P SW+L L F+PL + L Sbjct: 256 QLLFRPLVAWADRFRMENTRTANPPTSWLLNLL-------RRTRLFHRLFTPLGQLLGWL 308 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R +R+ + + R LD+ W + + + + + I Y+ + + +V Sbjct: 309 ARL--PLRWPGQPRYRPAPAPGRSQRYLDLLWSAAILLLTLYLCTRVILYVHSGVSLHEV 366 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 YV+ +G +T+ RV +LI+I+S+IW+P+G+ IG RP ++ KIQP AQ LAAFPAN+ FP Sbjct: 367 GYVLLMGLVTLLRVSLLILISSLIWVPLGVLIGLRPALAGKIQPLAQFLAAFPANLLFPA 426 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + ++ LNP++WLS L++ GTQWYILFNV+AG FPND++EV ++ HI GW+WWR Sbjct: 427 FVIAIMHFQLNPDIWLSPLIVLGTQWYILFNVVAGTMNFPNDYREVTANLHIRGWQWWRQ 486 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP IFPYYVTGA+TA GGAWNASIV+E WG + GLGAYIAE+T G+FP ++ Sbjct: 487 IMLPAIFPYYVTGAVTAAGGAWNASIVAEYVQWGDTRVVAHGLGAYIAENTASGNFPNII 546 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 LG+ IM FV NR LW PLY Y R Sbjct: 547 LGIAIMSLFVTLFNRLLWRPLYAYAESRFR 576 >gi|154245217|ref|YP_001416175.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154159302|gb|ABS66518.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 582 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 318/581 (54%), Positives = 411/581 (70%), Gaps = 7/581 (1%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 L R PN++D LAF L+ G + +++HG +ET P +D+ P++LD LP+YA Sbjct: 8 LEAGRRRTFAPNLWDALAFGLLFGGLILMVHGGKETLAPLAALDLAPVSLDPAMLPEYAL 67 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RTT+RML+A+V SL+FTF Y LAAKSRR MVLVP+LDI+QS+P+LGFL+FTVV FM+L Sbjct: 68 RTTMRMLAAIVASLVFTFAYGALAAKSRRAEMVLVPMLDILQSVPVLGFLSFTVVGFMSL 127 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 +PG+V+G ELAAIFAIFTSQ WNMTFS YQSL +PRDL+E +RSFRLSGWQ+FW L VP Sbjct: 128 FPGRVLGVELAAIFAIFTSQAWNMTFSFYQSLKTVPRDLDEATRSFRLSGWQRFWRLEVP 187 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 FSMPGLVWN MMSMSGGWFFVVASE I VGDT I LPG+GSY+ALAIKEQ+L A+ +A+L Sbjct: 188 FSMPGLVWNTMMSMSGGWFFVVASEAISVGDTTITLPGVGSYVALAIKEQNLAAVGWAVL 247 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 ML VI LYDQLLFRP++ W++KFR+E + SW+L R+T + + Sbjct: 248 AMLAVILLYDQLLFRPLVAWADKFRVETSASGAAPRSWLLSAARRTYLFQRV-------L 300 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 PL + + R ++ ++ + S + W +V VA + + + Sbjct: 301 QPLGAMLAAVPRQRLAFSAPVSQDTRRVVESAWASPWAEGIWLALVFAVAGYALYVIVAF 360 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + T +V V LG +TM RV+VLI +A++IW+P+G+WIG RP + ++QP AQ LA Sbjct: 361 VGTELTLPEVTQVFGLGVLTMIRVIVLIALATLIWVPIGVWIGLRPRWAQRVQPLAQFLA 420 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN+ FP V + L+P++WLS LM+ GTQWYILFNV+AGASAFPND KE AS+F Sbjct: 421 AFPANIIFPFAVVAIVRLGLDPDIWLSPLMVLGTQWYILFNVVAGASAFPNDLKEAASTF 480 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 I GW WWR ++LPGIFPYYVTGAITA GG+WNASIV+EVASWG LR G+GAYIA++ Sbjct: 481 RIRGWNWWRKVMLPGIFPYYVTGAITASGGSWNASIVAEVASWGDTTLRAHGVGAYIADA 540 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 T G +P +VLGV +M FV+ NR LW P++ + R LRL Sbjct: 541 TAAGDYPRIVLGVAVMSIFVIFFNRLLWRPMFTFAGRRLRL 581 >gi|197116829|ref|YP_002137256.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197086189|gb|ACH37460.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 578 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 283/574 (49%), Positives = 384/574 (66%), Gaps = 10/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R PN +DL AF++V+G++ + G +E +P + +P++LD +LP+YA RT LRM Sbjct: 14 RAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVNLPEYALRTVLRMA 73 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A+ SLLFTF Y TLAAKSRR +LVP+L+I+QS+PILGFL+ TV F+ ++PGK++G Sbjct: 74 AALAFSLLFTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTVTGFIAMFPGKLLG 133 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E AAIFAIFTSQ WNM FS YQSL IP DL E S F LS WQ+FW L PF+MP L+ Sbjct: 134 VECAAIFAIFTSQAWNMAFSFYQSLKTIPSDLSEASVLFGLSPWQRFWKLDAPFAMPPLI 193 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMS+SGGWFFVVASE I VG T + LPGIGSY+A AI + L AI +A+LTML VI Sbjct: 194 WNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSAIGWALLTMLLVIL 253 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 +YDQLLFRPM+ W++KF+ E T + SWVL LF++ LR G N + L++ + Sbjct: 254 VYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGRFLVNRWIRLTDLL 313 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + + + + +I W ++ G AW + ++ Sbjct: 314 PR----------RKQRASFRDATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGEVDG 363 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ V +LG +T+ RV VL+IIAS+IW+P+G++IG P ++++QP AQ LAAFPAN+F Sbjct: 364 AEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGLNPKWATRVQPLAQFLAAFPANLF 423 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+ V + +YHL+P +W + LMI GTQWYILFNVI GASA P D +E A +F ++GW+ Sbjct: 424 FPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSGWKL 483 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 W+ ++LPGIFP VTG +TA GG WNASIV+E+ +WG+ L TGLG+YIA TEKG +P Sbjct: 484 WKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKGDYP 543 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + LG+ +M +VL LNRF W L+ RL Sbjct: 544 RIALGIAVMSIYVLVLNRFFWERLFTVSQTRYRL 577 >gi|326314965|ref|YP_004232637.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371801|gb|ADX44070.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] Length = 578 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 265/569 (46%), Positives = 368/569 (64%), Gaps = 11/569 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D LV+ + +L +G + P ++ D++P++LD LP Y RTTLRM A+ Sbjct: 19 PNRWDWALLPLVLAGVVLLAYGAAQMARPFEMGDVIPLSLDPWQLPYYLLRTTLRMFIAL 78 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+F V+A LAAK R VLVP+LDI+QSIPILGFL+ TV F+ L+PG ++G E Sbjct: 79 GASLIFACVFAVLAAKYRLAERVLVPLLDILQSIPILGFLSITVTGFIALFPGSLLGVEC 138 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQSL +P +L+E +R F+LSGWQ+FW L +PF+MPGL+WNM Sbjct: 139 AAIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWRLELPFAMPGLLWNM 198 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPG+GSYIA+AI+ +DL AI +A+ ML I LYD Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIAMAIEARDLPAIGWAIACMLVAILLYD 258 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E + SW+L R+ + + ++L Sbjct: 259 QLLFRPLVAWADKFRFEEGSSDAAPRSWLLDWLRRARATQTVA----------GWCQRQL 308 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL + + ++ + + W V+ + + + ++ + +V Sbjct: 309 GRTLTLFKRSHDGTSIRARPPAPSARA-ERVWDAVLAAGVLFAIARLVQFVHTEVGWHEV 367 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++V LG T+ RV+VLI +A+++W+P+G+WIG P + ++Q AQ LAAFPAN+FFP+ Sbjct: 368 VHVFTLGGYTLVRVMVLIALAAVVWVPIGVWIGMNPRWAGRLQAVAQFLAAFPANLFFPV 427 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V V ++ LNP++WLS LMI GTQWYILFNVIAGAS+ PN+ + A + ++GW W+ Sbjct: 428 AVMLVVHWKLNPDVWLSPLMILGTQWYILFNVIAGASSIPNELRLAAQNLGLSGWLKWKR 487 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +LP +FP +VTGAITA GG+WNASIV+E +WG L+ GLG+YIA+ T G FP + Sbjct: 488 YLLPAVFPSFVTGAITASGGSWNASIVAEYVTWGDTTLQARGLGSYIAQMTATGDFPRIA 547 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 LG+ M FV+ LN FLW LY + Sbjct: 548 LGIGAMVVFVMGLNHFLWRRLYRLAEDRM 576 >gi|222081809|ref|YP_002541174.1| sugar ABC transporter [Agrobacterium radiobacter K84] gi|221726488|gb|ACM29577.1| sugar ABC transporter [Agrobacterium radiobacter K84] Length = 586 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 305/579 (52%), Positives = 397/579 (68%), Gaps = 11/579 (1%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 RI PN +DL+AF V + + +HG E P D + PI+LD LP+YA RTT Sbjct: 17 LARTRILPNGYDLVAFAFVAALAVLAVHGAAEMRAPLDGLANAPISLDPARLPEYALRTT 76 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LRM +A+ SL+FTFV+ATLAAKSRR M+++P LDI+QS+P+LGFLTFTV +FM ++PG Sbjct: 77 LRMFAAIGASLVFTFVFATLAAKSRRAEMIIIPALDILQSVPVLGFLTFTVTFFMGIFPG 136 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 +GAE A++FAIFTSQ WNM FS YQSL +PRDL+EVSR F LS WQ+FW L PFS Sbjct: 137 SQLGAECASVFAIFTSQAWNMAFSFYQSLRTVPRDLDEVSRGFGLSAWQRFWRLEAPFSA 196 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 PGL+WN MMSMSGGWFFVVASE I VG+T + LPG+GS++A+AI +QD A+ +A+L M Sbjct: 197 PGLIWNTMMSMSGGWFFVVASEAITVGNTTVQLPGLGSWLAVAIDKQDFAAVSWAVLAMG 256 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLR-FIGYSSWNFFSP 308 VI LYDQLLFRP++ W++KFR E+T G SWV L ++T L+ +G +W + S Sbjct: 257 VVIVLYDQLLFRPIVAWADKFRFEQTAGQEKPRSWVYSLIQRTRLLKCLMGPLAWAWGSL 316 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 + + + R V+R + N + MLD WF ++ G+ I W + ++ Sbjct: 317 MLVRLPAMPRKAPVVRHN----------NAVATRMLDYAWFVLIAGIGIWGIWTAFAFVS 366 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 T+ D G +T+ RV+VLI +AS+IW+P+G+WIG RP ++ ++QP AQ LAAF Sbjct: 367 QTLTWSDAWEAFSGGLVTLLRVLVLIAVASVIWVPIGVWIGLRPAVAERVQPVAQFLAAF 426 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PANV FP V + +PN+WLS LM+ GTQWYILFNVIAGASAFP D KE S + + Sbjct: 427 PANVLFPFAVIAIVATGASPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEACSVYQL 486 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 W WWR ILPGIFPYYVTGA+TA GG+WNASIV+EV SWGH L GLG+YIA++TE Sbjct: 487 RSWTWWRRAILPGIFPYYVTGALTASGGSWNASIVAEVVSWGHTKLEAFGLGSYIAKATE 546 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G + V+LG+ +M FV LNR LW PLY++ R LRL Sbjct: 547 AGDYQRVILGIAVMSLFVTLLNRTLWRPLYVFAERRLRL 585 >gi|300689778|ref|YP_003750773.1| binding-protein-dependent transporter [Ralstonia solanacearum PSI07] gi|299076838|emb|CBJ49450.1| Putative binding-protein-dependent transporter [Ralstonia solanacearum PSI07] Length = 586 Score = 534 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 271/571 (47%), Positives = 369/571 (64%), Gaps = 10/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLF+F +A +A+++R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL S ++ +A+ AW + ++ + + +V Sbjct: 316 ERTLAWGAERTRPKAHTNNSGSPRLPWAGRVADVIILLIALAAAWHILQFVRSEVGWSEV 375 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V+WLG +TM RV+VLI +A++IW+P+GI IG P+++ QP AQ LAAFPAN+ FPL Sbjct: 376 GRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 435 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + + A +F + GW W+ Sbjct: 436 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNFGLRGWLKWKR 495 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 496 FLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 555 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 556 LGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 586 >gi|120608820|ref|YP_968498.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] gi|120587284|gb|ABM30724.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] Length = 578 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 264/569 (46%), Positives = 366/569 (64%), Gaps = 11/569 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +D LV+ + +L +G + P ++ D++P++LD LP Y RTTLRM A+ Sbjct: 19 PNRWDWALLPLVLAGVVLLAYGAAQMARPFEMGDVIPLSLDPWQLPYYLLRTTLRMFIAL 78 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+F V+A LAAK R VLVP+LDI+QSIPILGFL+ TV F+ L+PG ++G E Sbjct: 79 GASLVFACVFAVLAAKYRLAERVLVPLLDILQSIPILGFLSITVTGFIALFPGSLLGVEC 138 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQSL +P +L+E +R F+LSGWQ+FW L +PF+MPGL+WNM Sbjct: 139 AAIFAIFTSQAWNMAFSLYQSLRTVPAELQEAARVFQLSGWQRFWRLELPFAMPGLLWNM 198 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPG+GSYIALAI+ +DL I +A+ ML I LYD Sbjct: 199 MMSMSGGWFFVVASEAISVSHQDIKLPGVGSYIALAIEARDLPTIGWAIACMLVAILLYD 258 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E + SW+L R+ + + ++L Sbjct: 259 QLLFRPLVAWADKFRFEEGSADAAPRSWLLDWLRRARATQTVA----------GWCQRQL 308 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL + R ++ + + W V+ + + + ++ + +V Sbjct: 309 GRTLTLFRRSHDGTSIRARPPAPSARA-ERVWDAVLAAGVLFAIARLVQFVHTEVGWHEV 367 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++V LG T+ RV+VLI +A+++W+P+G+WIG P + ++Q AQ LAAFPAN+FFP+ Sbjct: 368 VHVFTLGGYTLARVMVLIALAAVVWVPIGVWIGMNPRWAGRLQAVAQFLAAFPANLFFPV 427 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V ++ LNP++WLS LMI GTQWYILFNVIAGAS+ PN+ + A + ++GW W+ Sbjct: 428 AVMLAVHWKLNPDVWLSPLMILGTQWYILFNVIAGASSIPNELRLAAQNLGLSGWLQWKR 487 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +LP +FP +VTGAITA GG+WNASIV+E +WG L+ GLG+YIA+ T G FP + Sbjct: 488 YLLPAVFPSFVTGAITASGGSWNASIVAEYVTWGDTTLQARGLGSYIAQMTAAGDFPRIA 547 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 LG+ M FV+ LN F+W LY + Sbjct: 548 LGIGAMVVFVMGLNHFVWRRLYRLAEDRM 576 >gi|237801737|ref|ZP_04590198.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024596|gb|EGI04652.1| ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 584 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 289/569 (50%), Positives = 380/569 (66%), Gaps = 11/569 (1%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 D + VL+ + +LL+G + P D++ P++LD LP+YA RTTLRM A+ Sbjct: 26 WADGVCLVLLAVFVGLLLYGAGQMLQPIDVLTSSPVSLDPARLPEYAWRTTLRMFIALAA 85 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA Sbjct: 86 SLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMM Sbjct: 146 IFAIFTSQAWNIAFSFYQSLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 SMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L+AI +A+ M VI YDQL Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLMAIAWAVGAMALVILAYDQL 265 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 LFRP++ W++KFR E+T SW+ L R++ L + + Sbjct: 266 LFRPIVAWADKFRFEQTASSKRPRSWMYSLLRRSRLAPM-----------LGALLAAPWK 314 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L +I + N ++ VS ++D W +V + +I D+ Sbjct: 315 GLMLIDWRVLSNVWKVRPTPAVSRLIDYLWLGLVMAGCLAGGTYLFRFIEASLGLSDMAT 374 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 LG TM RV+VLIIIAS+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 375 AFGLGLATMLRVIVLIIIASLIWVPIGVWIGLRPVWAERLQPVAQFMAAFPANVLFPFAV 434 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + Sbjct: 435 IAIAGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALG 554 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++M FV+A NR LW PLY + R L L Sbjct: 555 IVVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|17548088|ref|NP_521490.1| transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17430395|emb|CAD16868.1| putative transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 586 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 269/571 (47%), Positives = 368/571 (64%), Gaps = 10/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLF+F +A +A+++R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSL----------LERTAALA 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL ++ ++ A+ W + ++ + + +V Sbjct: 316 ERTLAWGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVWHILQFVRSEVGWGEV 375 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V+WLG +TM RV+VLI +A++IW+P+GI IG P+++ QP AQ LAAFPAN+ FPL Sbjct: 376 GRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 435 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + + A +F + GW W+ Sbjct: 436 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNFGLRGWLKWKR 495 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 496 FLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 555 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 556 LGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 586 >gi|148258639|ref|YP_001243224.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146410812|gb|ABQ39318.1| Putative ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 585 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 289/578 (50%), Positives = 383/578 (66%), Gaps = 11/578 (1%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 R P+ DL A L++ I +++ G+ + P ++ P+ L + LP+YA + Sbjct: 17 SLAPRLAGPSWADLAAIALLLVIALLVIVGVGQMRQPLTALNAAPVDLQLLHLPEYALLS 76 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TLRM A+ SL+FT ATLAAKSR+ +++VP LDI+QS+P+LGFLTFTV++FMNL+P Sbjct: 77 TLRMFGALAASLIFTLTVATLAAKSRKAELIIVPALDILQSVPVLGFLTFTVMFFMNLFP 136 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G+ +G E AAIFAIFTSQ WNM FS YQSL +P+DL+EVSR F S W++F L +PF+ Sbjct: 137 GRQLGVECAAIFAIFTSQAWNMAFSFYQSLRTVPKDLDEVSRQFGFSSWRRFVRLELPFA 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 MPGLVWN MMSMSGGWFFVVASE I VG+T I LPGIGS++ALAI+ +D A+ +A+ M Sbjct: 197 MPGLVWNAMMSMSGGWFFVVASEAIAVGNTTIALPGIGSWLALAIERKDFGAVAWAVFAM 256 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 VI LYDQL+FRP++ W++KFR E+T SWV L R+T L Sbjct: 257 AVVIVLYDQLIFRPIVAWADKFRFEQTASRERPRSWVYDLARRTRLLP-----------S 305 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 + + R L + + P L N+ + + D W + V G + + +I Sbjct: 306 IIELLLVAGRALSALSWSAPPRRQTLHPNKHIIRVPDGLWIGFIAVVCFGASLWLLRFIS 365 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 T D++ ++ LG T+ RV VLI IASIIW+P+G+WIG RP S ++QP AQ LAAF Sbjct: 366 TSLTAADIISIVGLGFATLVRVAVLIAIASIIWVPIGVWIGLRPTWSERLQPVAQFLAAF 425 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PANV FP V + L+PN+WLS LMI GTQWYILFNVIAGASA PND +E A +F++ Sbjct: 426 PANVLFPFAVVIIIGLRLDPNIWLSPLMILGTQWYILFNVIAGASALPNDLREAARTFNM 485 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 G +WWR + LPGIFPY+VTGA+TA GG+WNASIV+E SWG L+ TGLG++IA++T Sbjct: 486 RGLQWWRQVALPGIFPYFVTGALTASGGSWNASIVAESVSWGDKRLQATGLGSFIADATA 545 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 G P V +G+++M FV+ LNR LW PLY Y R LR Sbjct: 546 AGDLPRVAVGIVVMSAFVVTLNRTLWRPLYRYAERRLR 583 >gi|285018221|ref|YP_003375932.1| ABC transporter permease [Xanthomonas albilineans GPE PC73] gi|283473439|emb|CBA15944.1| putative abc transporter transmembrane permease protein [Xanthomonas albilineans] Length = 584 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 292/572 (51%), Positives = 380/572 (66%), Gaps = 9/572 (1%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + PN+ DL F L++G+ +LLHG + P ++LD+ LP+Y RTTLRM + Sbjct: 20 VLPNLHDLTVFALLLGLGVLLLHGAADMRAPLPPPGTTSVSLDLWQLPEYGLRTTLRMFA 79 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 AM SLLFTFV ATLAAKSRR V+VP LDI+QS+P+LGFLTFTV +F+ L+PG+ IGA Sbjct: 80 AMAASLLFTFVVATLAAKSRRAERVIVPALDILQSVPVLGFLTFTVTFFLGLFPGRQIGA 139 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 ELA+IFAIFTSQ WNM FS YQSL N+PRDL+EV+R F +S WQ+FW L P++ P L+W Sbjct: 140 ELASIFAIFTSQAWNMAFSFYQSLRNVPRDLDEVARGFGMSAWQRFWRLEAPYATPSLIW 199 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSGGWFFVVASE I VGD + LPGIG+Y+ALAI +++ A+ +A+L M +I L Sbjct: 200 NMMMSMSGGWFFVVASEAITVGDHTLELPGIGAYLALAIGQRNFGAVAWAVLAMAVLIAL 259 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQLLFRP++ WS+KFR E T SW+ L R+T ++ + + + ++ Sbjct: 260 YDQLLFRPIVAWSDKFRAELTASQNKPQSWLYDLLRRTRLVKRLAAPLSWAWQR-TLLLR 318 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 R V S R + D FW + + AW + Y H + Sbjct: 319 WAPRRASV--------STAEASLGRGAVWGDRFWSVSLAAAGLTAAWFAFDYGRRHLSLH 370 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 D+ G T+ RVVVLI +AS++W+P+G+WIG RP ++ ++QP AQ LAAFPANV F Sbjct: 371 DLGDAFCGGLATLLRVVVLIALASLVWVPIGVWIGLRPKVAQRVQPLAQFLAAFPANVLF 430 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P V + NPN+WLS LMI GTQWYILFNVIAGASAFP D +E A+ + + W WW Sbjct: 431 PFAVLAIVATGANPNIWLSPLMILGTQWYILFNVIAGASAFPTDLREAATIYRLRSWTWW 490 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 R +ILPGIFPYYVTGA+TA GG+WNASIV+E+ASWG H++ GLG+YIA +T G Sbjct: 491 RRVILPGIFPYYVTGALTASGGSWNASIVAELASWGDRHVQAYGLGSYIARATAAGDGAR 550 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 V+LGV +M FV NR +W LY++ R LR Sbjct: 551 VLLGVAVMSLFVSIFNRAVWRRLYVFAERRLR 582 >gi|307130273|ref|YP_003882289.1| ABC transporter nitrate permease [Dickeya dadantii 3937] gi|306527802|gb|ADM97732.1| ABC transporter nitrate permease [Dickeya dadantii 3937] Length = 593 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 295/569 (51%), Positives = 388/569 (68%), Gaps = 11/569 (1%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 D+L F L+ + ++++G+++ ++P I+D P+ LD+ LP+YA RTTLRM A+ + Sbjct: 35 RADMLFFTLLALLAALVVYGMEQMSLPLSILDASPVRLDIALLPEYALRTTLRMFVALGV 94 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SLLFT V ATLAAKSR+ MV++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA Sbjct: 95 SLLFTLVIATLAAKSRKAEMVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 154 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFAIFTSQ WNM FS +QSL +P DL EVS+ F S W++F L +PF+ PGLVWNMMM Sbjct: 155 IFAIFTSQAWNMAFSFFQSLRTLPGDLSEVSQQFGFSPWRRFIRLELPFATPGLVWNMMM 214 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 SMSGGWFFVVASE I VG+T + LPGIGS++ALAI +++L AI +A++ M VI LYDQL Sbjct: 215 SMSGGWFFVVASEAITVGNTTVNLPGIGSWLALAIAQENLTAIAWAVVAMTVVIVLYDQL 274 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 LFRP++ W++KFR E+T SWV L R+T+ I +N + Sbjct: 275 LFRPVVAWADKFRFEQTASQKRPRSWVYDLIRRTHISTAI-----------ANVLGWPLH 323 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L +R+ +FL+ R S + D W +V + Q + YI DV+ Sbjct: 324 ALAALRWPRLPSFLRHTPGPRYSKVTDRLWLALVIIGVLAGVVQLVQYIGASLGMADVIA 383 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V +G T+ RVVVLI +AS+IW+P+G+WIG +P ++ ++QP AQ LAAFPANV FP V Sbjct: 384 VFSMGLATLARVVVLIALASVIWLPIGVWIGLQPSVAERLQPLAQFLAAFPANVLFPFAV 443 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ ++LNP++WLS LM+ GTQWYILFNVIAGA+A P D E A + I W+WWR + Sbjct: 444 ILIAGFNLNPDIWLSPLMVLGTQWYILFNVIAGAAALPTDLLEAARIYGIRRWQWWRQVA 503 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPGIFPYYVTGA+TA GG+WNASIVSE SWG HL TGLGAYIA +T FP V LG Sbjct: 504 LPGIFPYYVTGALTASGGSWNASIVSESISWGKQHLEATGLGAYIANATTAADFPRVALG 563 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + +M FV+A NR LW PLY + R LRL Sbjct: 564 IAVMSVFVIAFNRLLWRPLYQFAERRLRL 592 >gi|289166596|ref|YP_003456734.1| ABC transporter, permease protein [Legionella longbeachae NSW150] gi|288859769|emb|CBJ13750.1| putative ABC transporter, permease protein [Legionella longbeachae NSW150] Length = 579 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 272/584 (46%), Positives = 362/584 (61%), Gaps = 12/584 (2%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 Y P + R I N +DLL +L+ I+ L + P + + +PI+LD +L Sbjct: 5 RFYFANPDRVGRYI--NRWDLLLLILIFSILFFLGWAGSQMATPYQLGEQIPISLDPSNL 62 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P YA RT LRM A+ S++FTF AAK+RR +++P +DI+QSIP+L FL+ TV Sbjct: 63 PFYALRTVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIIIPAIDILQSIPVLSFLSITVT 122 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F++L+P ++G E A+IFAIF +QVWNMTF YQS+ +P DL+EV+ FRLS WQ+FW Sbjct: 123 GFIHLFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTLPHDLKEVASMFRLSAWQRFW 182 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 L VPFSM L+WNMM+SMS WFFVV SE I V I LPG+GSYIALAI+++DL A+ Sbjct: 183 KLEVPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIQQRDLHAV 242 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 YA+LTM+ VIFLYDQ+ FRP+I WS KF+ E + SW++ R + ++ Sbjct: 243 GYAILTMVIVIFLYDQIFFRPLIAWSEKFKAETSHDEAEYQSWLVDWMRGSRLMKQFAEI 302 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 F N E+ + + LD FW V AW Sbjct: 303 IGVFTDHFVN----------ARWMRLNESKAVKEIDLKKQRRLDRFWGAFVFLCVCSGAW 352 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + +I+ D+++V LG T RV+ LII++S+IWIPVG+WIG RP I+ KIQP Sbjct: 353 FLLRFILAELKISDIVHVFLLGAATGTRVICLIILSSLIWIPVGVWIGMRPRIAQKIQPV 412 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 Q +AAFPAN+F+PL V + +HLN +W++ LMI GTQWYILFNVIAGASA P + Sbjct: 413 IQFVAAFPANLFYPLFVIAIVKFHLNVEIWVTPLMILGTQWYILFNVIAGASAIPRELYL 472 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A +F + GW WW+ + +PGIFP+Y+TGAITA GGAWNASIV+E SWG+ LR TGLG Sbjct: 473 AADNFGLKGWLWWKRLAVPGIFPFYITGAITAAGGAWNASIVAEFVSWGNTTLRATGLGE 532 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 YI ST G FP++ LG +MC +VLA N +W PLY Sbjct: 533 YIQASTATGDFPKIALGTAMMCLYVLAFNHLIWRPLYRLAEERF 576 >gi|271499902|ref|YP_003332927.1| binding-protein-dependent transporter inner membrane component [Dickeya dadantii Ech586] gi|270343457|gb|ACZ76222.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech586] Length = 584 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 295/586 (50%), Positives = 395/586 (67%), Gaps = 12/586 (2%) Query: 3 LYNILPPFISRRIFPN-IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 + + +R P+ D+L F L+ ++ ++++G+++ ++P I+D P+ LD+ L Sbjct: 9 MTDNRALLTRQRATPSYRADILFFTLLALVVALVVYGMEQMSLPLSILDASPVRLDIALL 68 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P+YA RTTLRM A+ +SLLFT V ATLAAKSR+ MV++P LDI+QS+P+LGFLTFTV Sbjct: 69 PEYALRTTLRMFVALAVSLLFTLVIATLAAKSRKAEMVIIPALDILQSVPVLGFLTFTVT 128 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +FM L+PG+ +G E AAIFAIFTSQ WNM FS +QSL +P DL EVS+ F S W++F Sbjct: 129 FFMGLFPGRQMGVECAAIFAIFTSQAWNMAFSFFQSLRTLPGDLSEVSQQFGFSPWRRFI 188 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 L +PF++PGLVWNMMMSMSGGWFFVVASE I VG+T + LPGIGS++ALAI +++L AI Sbjct: 189 RLELPFAIPGLVWNMMMSMSGGWFFVVASEAITVGNTTVSLPGIGSWLALAIAQENLTAI 248 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 +A++ M VI LYDQLLFRP++ W++KFR E+T SWV L R+T+ I Sbjct: 249 AWAVVAMTVVIVLYDQLLFRPVVAWADKFRFEQTASQKRPRSWVYDLVRRTHISTAI--- 305 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 N + TL +R+ FL+ + R + + D W +V + Sbjct: 306 --------INVLSWPFYTLAALRWPSVPRFLRHTPSPRYNKITDRLWLALVIIGVLAGVV 357 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 Q + YI DV+ V +G T+ RVVVLI +AS+IW+P+G+WIG +P ++ ++QP Sbjct: 358 QLVQYIGASLGMADVIAVFGMGLATLARVVVLIALASVIWVPIGVWIGLQPSVAERLQPL 417 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 AQ LAAFPANV FP V ++ ++LNP++WLS LM+ GTQWYILFNVIAG +A P D E Sbjct: 418 AQFLAAFPANVLFPFAVILIAGFNLNPDIWLSPLMVLGTQWYILFNVIAGTAALPTDLLE 477 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A + I W+WWR + LPGIFPYYVTGA+TA GG+WNASIVSE SWG HL TGLGA Sbjct: 478 AARIYGIRRWQWWRQVALPGIFPYYVTGALTASGGSWNASIVSESISWGKQHLEATGLGA 537 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 YIA +T F +V LG+ +M FV+A NR LW PLY + R LRL Sbjct: 538 YIANATTAADFHQVALGIAVMSVFVIAFNRLLWRPLYQFAERRLRL 583 >gi|289625535|ref|ZP_06458489.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649788|ref|ZP_06481131.1| ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330870904|gb|EGH05613.1| ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 584 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 285/571 (49%), Positives = 378/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ L ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 C+ L +I + + V +LD W +V + + +I D+ Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVVRLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMGRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|299065148|emb|CBJ36312.1| Putative binding-protein-dependent transporter [Ralstonia solanacearum CMR15] Length = 585 Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats. Identities = 269/571 (47%), Positives = 369/571 (64%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVVQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLF+F +A +A+++R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 GASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSL----------LERTAALA 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL R+ + + ++ A+ W + ++ + + +V Sbjct: 316 ERTLAWGAERTRPKASGSNGFVRLPWAGRVA-DVIILLAALAAVWHILQFVRSEVGWGEV 374 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V+WLG +TM RV+VLI +A++IW+P+GI IG P+++ QP AQ LAAFPAN+ FPL Sbjct: 375 GRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 434 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS+ P + + A + + GW W+ Sbjct: 435 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRLAARNLGLRGWLKWKR 494 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 495 FLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 554 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 555 LGIGVMSLFVVGFNRLLWNRLYEVAQERTRL 585 >gi|71734937|ref|YP_277251.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555490|gb|AAZ34701.1| ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 584 Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats. Identities = 285/571 (49%), Positives = 380/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ L ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 C+ L +I + + V+ +LD W +V + + +I D+ Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + + LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTALGLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|289677501|ref|ZP_06498391.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae FF5] gi|330898685|gb|EGH30104.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 584 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 284/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + L+ I + ++G + P +++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLALLTLFIGLFIYGFGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 GASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ L ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGSV-----------LAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + L +I + ++ V+ +LD W +V + + +I D+ Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGVARVLDYVWLGLVMAACLAGSVYLFRFIEASLGASDM 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|330937353|gb|EGH41350.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 584 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 283/571 (49%), Positives = 378/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + ++ I + ++G+ + P +++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLAILTLFIGLFIYGLGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 GASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ L ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + L +I + ++ V+ +LD W +V + + +I D+ Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDM 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|302188283|ref|ZP_07264956.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae 642] Length = 584 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 282/571 (49%), Positives = 378/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + ++ I + ++G + P +++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLAILTLFIGLFIYGFGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 GASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ L ++ L++ + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPM-----------LASVLAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + L +I + ++ ++ +LD W +V + + +I D+ Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGIARVLDYVWLGLVMAACLAGSVYLFRFIEASLGTSDM 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|320321792|gb|EFW77890.1| ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331540|gb|EFW87480.1| ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 584 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 284/571 (49%), Positives = 379/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +P ++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPLAVPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ L ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 C+ L +I + + V+ +LD W +V + + +I D+ Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + + LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTALGLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|330976362|gb|EGH76419.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 584 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 283/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + ++ I + ++G+ + P +++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLAILTLFIGLFIYGLGQMMQPLTVLNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 GASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ L ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGSV-----------LAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + L +I + ++ V+ +LD W +V + + +I D+ Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDM 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMGLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|330952378|gb|EGH52638.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae Cit 7] Length = 584 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 282/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + ++ I + ++G+ + P +++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLAILTLFIGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ + ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGS-----------ILAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + L +I + ++ V +LD W +V + + +I D+ Sbjct: 313 WKCLMLIDWRVFSRLWKVKLTPGVVRVLDYAWLGLVMAACLAGSVYLFRFIEASLGVSDM 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI+IAS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|257485651|ref|ZP_05639692.1| ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 584 Score = 525 bits (1352), Expect = e-146, Method: Composition-based stats. Identities = 283/571 (49%), Positives = 380/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 Q+LFRP++ W++KFR E+T SW+ + ++ +G + Sbjct: 264 QVLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGS-----------ILAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 C+ L +I + + V+ +LD W +V + + +I D+ Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + + LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTALGLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRC 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|330961443|gb|EGH61703.1| ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 584 Score = 524 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 286/569 (50%), Positives = 380/569 (66%), Gaps = 11/569 (1%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 I D + V++ I +L +G+ + P ++D P+TLD LP+YA RTTLRM A+ Sbjct: 26 IADGICVVILAVFIALLWYGVGQMLQPLAVLDSSPVTLDPARLPEYALRTTLRMFIALAA 85 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SL+FTF+ ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA Sbjct: 86 SLIFTFIVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMM Sbjct: 146 IFAIFTSQAWNIAFSFYQSLRTVPNDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 SMSGGWFFVVA E I VGDT + LPGIGS++ALA+++++L AI +A+ M VI YDQL Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAVEQKNLPAIGWAVGAMALVILAYDQL 265 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 LFRP++ W++KFR E+T SWV + ++ +G + Sbjct: 266 LFRPVVAWADKFRFEQTASSKRPRSWVYSVLGRSRLAPLLGALLA-----------APWK 314 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L +I + F ++ RV+ ++D W +V + + +I D++ Sbjct: 315 GLMLIDWRVVSRFWKVKPTPRVARLIDYLWLGMVMAACLTASLYLFRFIEASLGLSDMIT 374 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 LG TM RV+VLI++AS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 375 AFGLGLATMLRVIVLIMVASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAV 434 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + Sbjct: 435 IAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIASATQAGDFPRVTLG 554 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + +M FV+A NR LW PLY + R L L Sbjct: 555 IAVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|213968477|ref|ZP_03396620.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301384946|ref|ZP_07233364.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302062022|ref|ZP_07253563.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302134333|ref|ZP_07260323.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926765|gb|EEB60317.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 584 Score = 524 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 283/569 (49%), Positives = 373/569 (65%), Gaps = 11/569 (1%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 D L L+ + ++L G + P +++ P++LD LP+YA RTTLRM A+ Sbjct: 26 WADGLCLALLALFVALVLFGASQMLQPIEVLTSSPMSLDPARLPEYALRTTLRMFIALAA 85 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA Sbjct: 86 SLIFTFVVATLAAKSRKAEHVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMM Sbjct: 146 IFAIFTSQAWNLAFSFYQSLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 SMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQ Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQF 265 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 LFRP++ W++KFR E+T SW+ L ++ LS + + Sbjct: 266 LFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWK 314 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L +I ++ V ++D W +V + + +I D++ Sbjct: 315 GLMLINGRGVSRLWKVKPTPGVVRVIDYLWLALVMAGCLTASVYLFRFIEASLGLSDMVG 374 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 LG TM RV+VLI IAS+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 375 AFGLGLATMLRVIVLIAIASVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAV 434 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + Sbjct: 435 IAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALG 554 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++M FV+A NR LW PLY + R L L Sbjct: 555 IVVMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|330970284|gb|EGH70350.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 584 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 280/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + ++ I + ++G+ + P +++ P++LD LP+YA RTT+RM A+ Sbjct: 24 PYWADGICLAILTLFIGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTMRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ + ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGSV-----------LAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + L +I ++ V+ +LD W +V + + +I D+ Sbjct: 313 WKCLMLIDGRVISRLWKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDM 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI++AS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMVRVIVLIVVASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|66048315|ref|YP_238156.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|63259022|gb|AAY40118.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas syringae pv. syringae B728a] Length = 584 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 279/571 (48%), Positives = 376/571 (65%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + ++ I + ++G+ + P +++ P++LD LP+YA RTT+RM A+ Sbjct: 24 PYWADGICLAILTLFIGLFIYGLGQMMQPLAVLNSSPMSLDPARLPEYALRTTMRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLIFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVSRQFGLSAVLRFTRLELPFAIPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++AL I++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALTIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ + ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGSV-----------LAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + L +I ++ V+ +LD W +V + + +I D+ Sbjct: 313 WKCLMLIDGRVISRLWKVKLTPGVARVLDYAWLGLVMAACLAGSVYLFRFIEASLGASDM 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI++AS+IW+PVGIWIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMVRVIVLIVVASLIWVPVGIWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATMFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYY+TGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYITGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSVFVIAFNRLLWRPLYGFAERRLSL 583 >gi|331011939|gb|EGH91995.1| ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 584 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 282/571 (49%), Positives = 379/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PYWADGICLVVIAVFIALVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 Q+LFRP++ W++KFR E+T SW+ + ++ +G + Sbjct: 264 QVLFRPIVAWADKFRFEQTASSKRPRSWMYSVLGRSRVAPMLGS-----------ILAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 C+ L +I + + V+ +LD W +V + + +I D+ Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVARLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + + LG TM RV+VLI+IAS+IW+PVG+WIG RP + ++QP AQ +AAFPANV FP Sbjct: 373 VTALGLGLATMVRVIVLIVIASLIWVPVGVWIGLRPVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRC 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+ PYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVVPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|28872656|ref|NP_795275.1| ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855912|gb|AAO58970.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 584 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 283/569 (49%), Positives = 373/569 (65%), Gaps = 11/569 (1%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 D L L+ + ++L G + P +++ P++LD LP+YA RTTLRM A+ Sbjct: 26 WADGLCLALLALFVALVLFGAGQMLQPIEVLTSSPMSLDPARLPEYALRTTLRMFIALAA 85 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AA Sbjct: 86 SLIFTFVVATLAAKSRKAEHVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAA 145 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFAIFTSQ WN+ FS YQSL +P DL EVSR F LS +F L +PF++PGLVWNMMM Sbjct: 146 IFAIFTSQAWNLAFSFYQSLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMM 205 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 SMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YDQ Sbjct: 206 SMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQF 265 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 LFRP++ W++KFR E+T SW+ L ++ LS + + Sbjct: 266 LFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWK 314 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L +I ++ V ++D W +V + + +I D++ Sbjct: 315 GLMLINGRGVSRLWKVKPTPGVVRVIDYLWLALVMAGCLTASVYLFRFIEASLGLSDMVG 374 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 LG TM RV+VLI IAS+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V Sbjct: 375 AFGLGLATMLRVIVLIAIASVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAV 434 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + Sbjct: 435 IAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVA 494 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG Sbjct: 495 LPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALG 554 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++M FV+A NR LW PLY + R L L Sbjct: 555 IVVMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|330986971|gb|EGH85074.1| ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 584 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 284/571 (49%), Positives = 377/571 (66%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P D + V++ I ++L+G+ + P ++ P++LD LP+YA RTTLRM A+ Sbjct: 24 PFWADGICLVVIAVFITLVLYGVGQMMQPLAALNSSPMSLDPARLPEYALRTTLRMFIAL 83 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+FTFV ATLAAKSR+ V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E Sbjct: 84 AASLVFTFVVATLAAKSRKAEQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQMGVEC 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WN+ FS YQSL +P DL EV+R F LS +F L +PF++PGLVWNM Sbjct: 144 AAIFAIFTSQAWNLAFSFYQSLRTVPSDLNEVTRQFGLSPLLRFTRLELPFAVPGLVWNM 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVA E I VGDT + LPGIGS++ALAI++++L AI +A+ M VI YD Sbjct: 204 MMSMSGGWFFVVACEAISVGDTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYD 263 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W++KFR E+T SW+ L ++ +G + Sbjct: 264 QLLFRPIVAWADKFRFEQTASSKRPRSWMYSLLGRSRVAPMLGS-----------ILAAP 312 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 C+ L +I + + V +LD W +V + + +I D+ Sbjct: 313 CKCLMLIDWRVVSRLWNVKLTPGVVRLLDYLWLALVMAACLTGSVYLFRFIETSLGMSDL 372 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + LG TM RV+VLI+IAS+IW+PVG+WIG R + ++QP AQ +AAFPANV FP Sbjct: 373 VTAFGLGLATMVRVIVLIVIASLIWVPVGVWIGLRLVWAERLQPIAQFMAAFPANVLFPF 432 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + HLNP++WLS LM+ GTQWYILFNVIAGASA P D +E A+ F++ GW+WWR Sbjct: 433 AVIAIVGLHLNPDIWLSPLMVLGTQWYILFNVIAGASALPTDLREAATIFNMRGWQWWRR 492 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LPG+FPYYVTGA+TA GG+WNASIV+E SWG HL GLG+YIA +T+ G FP V Sbjct: 493 VALPGVFPYYVTGALTASGGSWNASIVAEAVSWGDQHLEAAGLGSYIANATQAGDFPRVA 552 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+A NR LW PLY + R L L Sbjct: 553 LGIVVMSIFVIAFNRLLWRPLYGFAERRLSL 583 >gi|217976878|ref|YP_002361025.1| binding-protein-dependent transport systems inner membrane component [Methylocella silvestris BL2] gi|217502254|gb|ACK49663.1| binding-protein-dependent transport systems inner membrane component [Methylocella silvestris BL2] Length = 578 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 290/577 (50%), Positives = 393/577 (68%), Gaps = 10/577 (1%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 + R+ PN +DLL L+ + H T+P + +LD LP YA RTTL Sbjct: 11 LGRKALPNQYDLLGLGLIFSAFIAIAHFSHGLTLPIAAPNSTVTSLDYAGLPYYAMRTTL 70 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM +AM SLLFTF YATLAAKSRR +VL+P+LDI+QS+PILGFL+FTV +F+ L+PG Sbjct: 71 RMFAAMAASLLFTFTYATLAAKSRRAELVLIPLLDILQSVPILGFLSFTVTFFLGLFPGS 130 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIFAIFTSQ WNM FS YQSL ++PRDL EV+ F+LSGWQ+FW L PF+MP Sbjct: 131 ILGVECAAIFAIFTSQAWNMAFSFYQSLRSVPRDLVEVASGFQLSGWQRFWQLEAPFAMP 190 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 GL+WNMMMSMSGGWFFVVASE I VGDT I LPG+GSY+ALAI+++ + A+ A++TM Sbjct: 191 GLIWNMMMSMSGGWFFVVASEAISVGDTTIKLPGVGSYLALAIEQKRIDAVFAAVVTMAI 250 Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310 VI YDQLLFRP++ + ++FR+E + G + S+V LF +T++LR + + F + Sbjct: 251 VILAYDQLLFRPLVAFGSRFRVELSAGQSQSRSFVRDLFLRTHWLRALTRPPSDLFQSFA 310 Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 +L R+ + + + +S ++DI WF + + W+ + Y+ Sbjct: 311 LWRLELRRS----------HKFKPAPDPALSRLVDILWFVAIAAMIAWSGWRIVDYVSTE 360 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 T+ D+ + T+ RVVVL+ +A+I+W+PVG+WIG RP ++ KIQP AQ LAAFPA Sbjct: 361 LTFADLGQAVEYTLFTLIRVVVLLALATIVWVPVGVWIGLRPALADKIQPLAQFLAAFPA 420 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 NV FP+ V + + LNP++WLS L++FGTQWYILFNVIAGA+AFPND KE + F I G Sbjct: 421 NVIFPIAVVLILRFSLNPDIWLSPLIVFGTQWYILFNVIAGAAAFPNDLKEAVAGFRIHG 480 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 WW+ +++P IFP+YVTGA+TA GG+WNA+IV+E WG + G+GAYIAE+TEKG Sbjct: 481 LDWWKSVMIPAIFPFYVTGALTASGGSWNAAIVAEYVRWGDTVVAAHGIGAYIAEATEKG 540 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P++VLGV +M V+ NR W PL+ R LRL Sbjct: 541 DYPKIVLGVAVMAAVVILFNRLFWRPLFGLAERRLRL 577 >gi|254497295|ref|ZP_05110103.1| ABC transporter, permease protein [Legionella drancourtii LLAP12] gi|254353523|gb|EET12250.1| ABC transporter, permease protein [Legionella drancourtii LLAP12] Length = 580 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 273/584 (46%), Positives = 371/584 (63%), Gaps = 12/584 (2%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 Y P + R F N +DLL +L+ ++ L + P + D +PI+L +L Sbjct: 6 RFYFANPDRVGR--FINRWDLLLLILIFAVLFFLGWAGSQMATPYQLGDQIPISLVPENL 63 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P YA RT LR+ A+ S+LFTF LAAK+RR V++P +DI+QSIP+L FL+ TV Sbjct: 64 PFYALRTVLRLFIALFFSILFTFAVGLLAAKNRRAEQVIIPAIDILQSIPVLSFLSITVT 123 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F++L+P ++G E A+IFAIF +QVWNMTF YQSL IP DL+EV+ FRLS WQ+FW Sbjct: 124 GFIHLFPHSLLGPECASIFAIFCAQVWNMTFGFYQSLKTIPHDLQEVAAMFRLSAWQRFW 183 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 L VPFSM GL+WNMM+SMS WFFVV SE I V I LPGIGSYIALAI+++DL A+ Sbjct: 184 KLEVPFSMSGLLWNMMISMSASWFFVVLSEAISVAHQNIRLPGIGSYIALAIQQRDLHAV 243 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 YA+LTM+ VIFLYDQ+LFRP+I WS KF+ E + SW++ R + ++ Sbjct: 244 GYAILTMVIVIFLYDQILFRPLIAWSEKFKFEPSPDESEYQSWLVDWIRCSRLMKR---- 299 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 F+ + + R P+ ++ ++ +D FW +V + W Sbjct: 300 ----FTEIIDIFTNSFVNARWFRIGEPKAIKEIDFKRQ--KRIDRFWSTMVLFCVLSGGW 353 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + +I+ D+L+V LG T RV+ LI+++S+IWIPVG+WIG RP I+ +IQP Sbjct: 354 FLLRFILAELKVSDILHVFLLGAATGTRVIALIVLSSLIWIPVGVWIGLRPRIAQRIQPV 413 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 Q +AAFPAN+F+PL V + ++LN +W++ LMI GTQWYILFNVIAGAS P + Sbjct: 414 IQFVAAFPANLFYPLFVIAIVEFNLNVEIWVTPLMILGTQWYILFNVIAGASTIPRELYL 473 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A +F + GW WW+ ++LPGIFP+Y+TGAITA GGAWNASIV+E SWG++ L+ TGLGA Sbjct: 474 AADNFGLKGWLWWKRLVLPGIFPFYITGAITAAGGAWNASIVAEWVSWGNVTLKATGLGA 533 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 YI ST G FP++ LG +MC +VL N +W PLY Sbjct: 534 YIQASTTIGDFPQIALGTAMMCLYVLTFNHLIWRPLYRLAEERF 577 >gi|330878195|gb|EGH12344.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 584 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 280/551 (50%), Positives = 368/551 (66%), Gaps = 11/551 (1%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G + P D+++ P++LD LP+YA RTTLRM A+ SL+FTF ATLAAKSR+ Sbjct: 44 FGAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFAVATLAAKSRKA 103 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQ Sbjct: 104 EQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQ 163 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 SL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E I VG Sbjct: 164 SLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVG 223 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 DT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR E+T Sbjct: 224 DTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFRFEQTA 283 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336 SW+ L ++ LS + + L +I ++ Sbjct: 284 SSKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKP 332 Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396 V ++D W +V + + +I + D++ LG TM RV+VLI+I Sbjct: 333 TPGVVRVMDYLWLALVMAGCLTASVYLFRFIEASLGFSDMVSAFGLGLATMLRVIVLIVI 392 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 AS+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V + HLNP++WLS LM Sbjct: 393 ASLIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLM 452 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG Sbjct: 453 VLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGG 512 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576 +WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG+++M FV+A NR LW P Sbjct: 513 SWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRP 572 Query: 577 LYLYGTRCLRL 587 LY + R L L Sbjct: 573 LYGFAERRLSL 583 >gi|222106535|ref|YP_002547326.1| ABC-type anion transport system, duplicated permease component [Agrobacterium vitis S4] gi|221737714|gb|ACM38610.1| ABC-type anion transport system, duplicated permease component [Agrobacterium vitis S4] Length = 556 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 319/566 (56%), Positives = 413/566 (72%), Gaps = 11/566 (1%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 ++A +L+IG+I + +G + TT+P +D P++LD +LP YA RT LRML+A+V SL+ Sbjct: 1 MMALLLIIGVIVLFAYGERVTTIPLSALDAAPLSLDPTNLPIYALRTILRMLAAIVFSLI 60 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 FT +YA++AAKSRR MV++P+LDI+QS+PILGFLTFTV +F+NL+PG+VIGAELAA+FA Sbjct: 61 FTLIYASVAAKSRRAEMVMIPVLDILQSVPILGFLTFTVTFFLNLFPGRVIGAELAAVFA 120 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IFTSQ WNMTFS+YQS+ + P+DLEE +RSF+LSGWQ+FW L VPF+MPGLVWN MMSMS Sbjct: 121 IFTSQAWNMTFSLYQSMRSQPKDLEEATRSFQLSGWQRFWRLDVPFAMPGLVWNTMMSMS 180 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GGWFFVVASE I VG+T + LPGIGSY+ALAIK+QD+LA+ YA++ ML VI LYDQL+FR Sbjct: 181 GGWFFVVASEAITVGNTTVTLPGIGSYVALAIKQQDILAVFYAVIAMLAVILLYDQLMFR 240 Query: 262 PMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLG 321 P++ W++KFR E T SW+L L RK R L + + R L Sbjct: 241 PLVAWADKFRFETTASGVAPSSWMLDLLRKARVTRL-----------LLAPLNWVARQLW 289 Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381 +R + ++ S ++D W ++ A A+ S Y+ + ++ VI Sbjct: 290 TLRLPKLRSTGSKTASPANSRVIDWIWIAIIACAAAWAAYISFDYLRASIGWSEIPTVIL 349 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 G IT+ RV+VL+ IA+++W+PVG+WIG RP +S K+QP AQ LAAFPAN+ FP+ V + Sbjct: 350 YGSITLLRVIVLMAIATVVWVPVGVWIGLRPKLSEKVQPLAQFLAAFPANIAFPVFVVVI 409 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 ++ LN ++WLS LMI GTQWYILFNVIAGASAFP+D KE A SFHITGWRWW +ILPG Sbjct: 410 VHFGLNADIWLSPLMILGTQWYILFNVIAGASAFPSDLKEAARSFHITGWRWWFKVILPG 469 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 IFPYY+TGAITA GG+WNASIV+EVASWG L T GLG+YIA +T G FP VVLG+++ Sbjct: 470 IFPYYITGAITASGGSWNASIVAEVASWGDTQLTTPGLGSYIANATTAGDFPRVVLGIIV 529 Query: 562 MCCFVLALNRFLWHPLYLYGTRCLRL 587 MC FV NR +W PLY YG LRL Sbjct: 530 MCTFVTLFNRLVWRPLYAYGESRLRL 555 >gi|330810315|ref|YP_004354777.1| ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378423|gb|AEA69773.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 546 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 289/557 (51%), Positives = 377/557 (67%), Gaps = 12/557 (2%) Query: 31 IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90 + + HG+ + P ++D P++LD+ LP+Y RTTLRM A+ S +F+ V ATLA Sbjct: 1 MAAFVFHGLDQMNQPLGVLDSSPLSLDLVHLPEYTLRTTLRMFIALFASFVFSLVVATLA 60 Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 AKSR+ +V++P LDI+QS+P+LGFLTFTVV+FM L+PGK G E AAIFAIFTSQVWNM Sbjct: 61 AKSRKAAIVILPALDILQSVPVLGFLTFTVVFFMGLFPGKETGVECAAIFAIFTSQVWNM 120 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 TFS YQSL +P DL EVSR F S WQ+F L +PF+ PGLVWNMMMSMSGGWFFVVAS Sbjct: 121 TFSFYQSLRTVPNDLYEVSRQFAFSPWQRFIRLELPFATPGLVWNMMMSMSGGWFFVVAS 180 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 E I VGDT + LPGIGS++ALAI++Q++ AI +A+L M+ VI YD L FRP++ W++KF Sbjct: 181 EAITVGDTTVSLPGIGSWLALAIEQQNIAAIAWAVLAMVAVIIAYDLLFFRPIVAWADKF 240 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 R E+T S V L R T + + + + + L ++KL R Sbjct: 241 RFEQTASQKRPRSRVYDLLRSTRLVPLVLLALGSIKASL--FLEKLPRL----------P 288 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 ++ ++ RVS D W +V I Q +I + ++DV LG IT+ RV Sbjct: 289 SIRFKTSARVSRTADRVWLALVAAACIAGILQLSRFIGSTLGWEDVASTFGLGLITLVRV 348 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VLI++AS++W+P+G+WIG P + ++QP AQLLAAFPANV FP V + LNP++ Sbjct: 349 SVLIVLASVVWVPIGVWIGLNPRWAERLQPIAQLLAAFPANVLFPFAVIAIVALKLNPDV 408 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 WLS LMI GTQWYILFNVIAGASA P D +E A SFHI GW+WWR + LPG+FPYYVTGA Sbjct: 409 WLSPLMILGTQWYILFNVIAGASALPTDLREAARSFHIHGWQWWRQVALPGVFPYYVTGA 468 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 +TA GG+WNASIV+E SWG HL +GLG++IA++T G V LGV++M FV+ N Sbjct: 469 LTAAGGSWNASIVAEAVSWGDHHLYASGLGSFIAQATTAGDLQRVALGVVVMSIFVVGFN 528 Query: 571 RFLWHPLYLYGTRCLRL 587 R LW PLY + R LR+ Sbjct: 529 RLLWRPLYGFAERRLRI 545 >gi|331017764|gb|EGH97820.1| ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 584 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 280/551 (50%), Positives = 365/551 (66%), Gaps = 11/551 (1%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G + P D+++ P++LD LP+YA RTTLRM A+ SL+FTFV ATL AKSR+ Sbjct: 44 FGAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFVVATLGAKSRKA 103 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS YQ Sbjct: 104 EQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFYQ 163 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 SL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E I VG Sbjct: 164 SLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVG 223 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 DT + LPGIGS++ALAI++++L AI +A+ M VI YDQ LFRP++ W++KFR E+T Sbjct: 224 DTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQFLFRPIVAWADKFRFEQTA 283 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336 SW+ L + LS + + L +I ++ Sbjct: 284 SSKRPRSWMYSLLGGSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKP 332 Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396 V ++D W +V + + +I + D++ LG TM RV+VLI I Sbjct: 333 TPGVVRVIDYLWLALVMAGCLTASVYLFHFIEASLGFSDMVGAFGLGLATMLRVIVLIAI 392 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 AS+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V + HLNPN+WLS LM Sbjct: 393 ASVIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPNIWLSPLM 452 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG Sbjct: 453 VLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGG 512 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576 +WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG+++M FV+A NR LW P Sbjct: 513 SWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRP 572 Query: 577 LYLYGTRCLRL 587 LY + R L L Sbjct: 573 LYGFAERRLSL 583 >gi|330964413|gb|EGH64673.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 584 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 279/551 (50%), Positives = 368/551 (66%), Gaps = 11/551 (1%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G + P D+++ P++LD LP+YA RTTLRM A+ SL+FTF ATLAAKSR+ Sbjct: 44 FGAGQMLQPIDVLNSSPMSLDPARLPEYALRTTLRMFIALAASLIFTFAVATLAAKSRKA 103 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 V++P LDI+QS+P+LGFLTFTV +FM L+PG+ +G E AAIFAIFTSQ WN+ FS +Q Sbjct: 104 EQVIIPALDILQSVPVLGFLTFTVTFFMGLFPGRQLGVECAAIFAIFTSQAWNLAFSFFQ 163 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 SL +P DL EVSR F LS +F L +PF++PGLVWNMMMSMSGGWFFVVA E I VG Sbjct: 164 SLRTVPSDLSEVSRQFGLSPVLRFTRLELPFAIPGLVWNMMMSMSGGWFFVVACEAISVG 223 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 DT + LPGIGS++ALAI++++L AI +A+ M VI YDQLLFRP++ W++KFR E+T Sbjct: 224 DTTVNLPGIGSWLALAIEQKNLAAIAWAVGAMALVILAYDQLLFRPIVAWADKFRFEQTA 283 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336 SW+ L ++ LS + + L +I ++ Sbjct: 284 SSKRPRSWMYSLLGRSRVAPM-----------LSALLAAPWKGLMLINGRGVSRLWKVKP 332 Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396 V ++D W +V + + +I + D++ LG TM RV+VLI+I Sbjct: 333 TPGVVRVMDYLWLALVMAGCLTASVYLFRFIEASLGFSDMVGAFGLGLATMLRVIVLIVI 392 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 AS+IW+P+G+WIG RP + ++QP AQ +AAFPANV FP V + HLNP++WLS LM Sbjct: 393 ASLIWVPIGVWIGLRPVWAERLQPIAQFMAAFPANVLFPFAVIAIVGLHLNPDIWLSPLM 452 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + GTQWYILFNVIAGASA P D +E AS F++ GW+WWR + LPG+FPYYVTGA+TA GG Sbjct: 453 VLGTQWYILFNVIAGASALPTDLREAASMFNMRGWQWWRRVALPGVFPYYVTGALTASGG 512 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576 +WNASIV+E SWG HL+ GLG+YIA +T+ G FP V LG+++M FV+A NR LW P Sbjct: 513 SWNASIVAEAVSWGDQHLQAAGLGSYIANATQAGDFPRVALGIVVMSIFVIAFNRLLWRP 572 Query: 577 LYLYGTRCLRL 587 LY + R L L Sbjct: 573 LYGFAERRLSL 583 >gi|241664824|ref|YP_002983184.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] gi|240866851|gb|ACS64512.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] Length = 594 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 269/572 (47%), Positives = 366/572 (63%), Gaps = 12/572 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 34 PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 94 GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A+L ML I LYD Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS-PLSNNVKK 315 QLLFRP+I W+++FR + + SW+L L R++ +++ + + LS ++ Sbjct: 274 QLLFRPLIAWADRFRFDTMSSEREPQSWLLDLLRRSEWVKALLERTAALAEHTLSWGAER 333 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 T P V+ A+ + ++ + + + Sbjct: 334 TRPTAAGSNGFLPRFPWSH-----------RVADVVIILAALMAVAHVLQFVRSEVGWAE 382 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V +V WLG +TM RV++LI +A+++W+P+GI IG P+++ QP AQ LAAFPAN+ FP Sbjct: 383 VGHVFWLGFLTMLRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFP 442 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L V ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K A +F + GW W+ Sbjct: 443 LAVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLWK 502 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 503 RFLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRI 562 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 563 ALGIAVMSLFVVGFNRLLWNRLYDIAQERTRL 594 >gi|52840376|ref|YP_094175.1| ABC transporter, permease protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627487|gb|AAU26228.1| ABC transporter, permease protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 579 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 273/584 (46%), Positives = 370/584 (63%), Gaps = 12/584 (2%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 Y P SR F N +DLL +L ++ L + P + D +PI+L+ +L Sbjct: 5 RFYFANPDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNL 62 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P YA RT LRM A++ S+LFTF+ LAAK+RR +++P +DI+QSIP+L FL+ TV Sbjct: 63 PFYALRTVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVT 122 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F++L+P ++G E A+IFAIF++QVWNMTF YQSL +P DL EVS FRLS WQ+FW Sbjct: 123 GFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFW 182 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + VPFSM GL+WNMM+SMS WFFVV SE I V I LPG+GSYIALAI ++DL A+ Sbjct: 183 KVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAV 242 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 YA+LTM+ VIFLYDQ+LFRP+I WS KF++E++ SW++ L R + ++ + Sbjct: 243 GYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEW 302 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 F + N E + + LD W +V I W Sbjct: 303 LAVFTNSFVN----------ARWLRIGEVKAVKEIDFKRQKRLDRLWTALVLIAVITGGW 352 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + +I+ D+ +V LG T RV++LI+++S++WIPVG+WIG RP ++ KIQP Sbjct: 353 FLLKFILAELKVSDIFHVFLLGAATGSRVIILILLSSMLWIPVGVWIGLRPRLAQKIQPI 412 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 Q +AAFPAN+F+PL V + ++L+ +W++ LMI GTQWYILFNVIAGAS+ P D Sbjct: 413 IQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYL 472 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A +F + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E SWG+I L+ TGLG Sbjct: 473 AADNFGLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGE 532 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 YI ST G FP++ LG +MC +VLA N +W PLY Sbjct: 533 YIQASTTAGDFPQIALGTAMMCVYVLAFNHLIWRPLYRLAEERF 576 >gi|148553197|ref|YP_001260779.1| binding-protein-dependent transport systems inner membrane component [Sphingomonas wittichii RW1] gi|148498387|gb|ABQ66641.1| binding-protein-dependent transport systems inner membrane component [Sphingomonas wittichii RW1] Length = 582 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 287/575 (49%), Positives = 372/575 (64%), Gaps = 12/575 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN D++A +L+ G+ +++ G + P + P+TLD +LP YA RTTLRM Sbjct: 19 RVTAPNRADIIAVLLLAGLSILVIRGAEGMAEPLARLRNAPVTLDPWNLPGYALRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +A+ SL FT TLAA+SRR ++VP LDI+QS+PILGFLTFTV +FM L+PG+ + Sbjct: 79 FAALFASLAFTLAIGTLAARSRRAEQIIVPALDILQSVPILGFLTFTVTFFMGLFPGRQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G ELA+IFAIFTSQ WNM FS YQSL ++P DLEEVSR F LS ++F L +PF+ P L Sbjct: 139 GVELASIFAIFTSQAWNMAFSFYQSLRSVPSDLEEVSRGFGLSPLRRFLRLELPFATPAL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 VWN MMSMSGGWFFVVASE I VG+T + LPGIGS++ALAI D + +A+ M VI Sbjct: 199 VWNAMMSMSGGWFFVVASEAITVGNTSVTLPGIGSWLALAIDRSDFTGVAWAVGAMAVVI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQL+FRP++ W+++FR E+ SW LFR+T L + L Sbjct: 259 LLYDQLVFRPVVAWADRFRFEQVASTERPRSWAYELFRRTRLLPLLLMPLAGLGRALL-- 316 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 L +R P + R + D W + + AW IGY+ Sbjct: 317 ------MLDPVRAPRPAGR----AEARRGVIGDRVWTAAIAIAVLFAAWTIIGYVGRTLD 366 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + V L C+TM RV+ LI +AS+IW+PVG+WIG RP + ++QP AQ LAAFPANV Sbjct: 367 WAEAAAVFGLACLTMLRVLALIAVASLIWVPVGVWIGLRPQWAERLQPVAQFLAAFPANV 426 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V + + L+P++WLS LM+ GTQWYILFNVIAGASA P D +E A F + GW+ Sbjct: 427 LFPFAVIAIVRWKLDPDIWLSPLMVMGTQWYILFNVIAGASAIPTDLREAAGMFGVRGWQ 486 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR + LPGIFPYYVTGA+TA GG+WNASIV+E SWG HL +GLGA+IA++T G + Sbjct: 487 WWRQVALPGIFPYYVTGALTASGGSWNASIVAEAVSWGDDHLHASGLGAFIADATAIGDY 546 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P V LG+ +M FV+A NR LW PLY + R LRL Sbjct: 547 PRVALGIAMMSLFVIAFNRLLWRPLYSFAERRLRL 581 Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 93/268 (34%), Gaps = 6/268 (2%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--AWQSIGYIVNHFTYQDVLYV 379 L++ + R + + + V G + + + N D + Sbjct: 8 ARGLRPFSRMLRVTAPNRADIIAVLLLAGLSILVIRGAEGMAEPLARLRNAPVTLDPWNL 67 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF----P 435 T R+ + + + +G I P +L + P F Sbjct: 68 PGYALRTTLRMFAALFASLAFTLAIGTLAARSRRAEQIIVPALDILQSVPILGFLTFTVT 127 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 + L L + W + F+ + P+D +EV+ F ++ R + Sbjct: 128 FFMGLFPGRQLGVELASIFAIFTSQAWNMAFSFYQSLRSVPSDLEEVSRGFGLSPLRRFL 187 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + LP P V A+ + G W + SE + G+ + G+G+++A + ++ F V Sbjct: 188 RLELPFATPALVWNAMMSMSGGWFFVVASEAITVGNTSVTLPGIGSWLALAIDRSDFTGV 247 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTR 583 V M +L ++ ++ P+ + R Sbjct: 248 AWAVGAMAVVILLYDQLVFRPVVAWADR 275 >gi|54293082|ref|YP_125497.1| hypothetical protein lpl0120 [Legionella pneumophila str. Lens] gi|54296116|ref|YP_122485.1| hypothetical protein lpp0135 [Legionella pneumophila str. Paris] gi|296105630|ref|YP_003617330.1| ABC transporter, permease protein [Legionella pneumophila 2300/99 Alcoy] gi|53749901|emb|CAH11283.1| hypothetical protein lpp0135 [Legionella pneumophila str. Paris] gi|53752914|emb|CAH14350.1| hypothetical protein lpl0120 [Legionella pneumophila str. Lens] gi|295647531|gb|ADG23378.1| ABC transporter, permease protein [Legionella pneumophila 2300/99 Alcoy] gi|307608865|emb|CBW98263.1| hypothetical protein LPW_01211 [Legionella pneumophila 130b] Length = 579 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 273/584 (46%), Positives = 370/584 (63%), Gaps = 12/584 (2%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 Y P SR F N +DLL +L ++ L + P + D +PI+L+ +L Sbjct: 5 RFYFANPDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNL 62 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P YA RT LRM A++ S+LFTF+ LAAK+RR +++P +DI+QSIP+L FL+ TV Sbjct: 63 PFYALRTVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVT 122 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F++L+P ++G E A+IFAIF++QVWNMTF YQSL +P DL EVS FRLS WQ+FW Sbjct: 123 GFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMFRLSAWQRFW 182 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + VPFSM GL+WNMM+SMS WFFVV SE I V I LPG+GSYIALAI ++DL A+ Sbjct: 183 KVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAV 242 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 YA+LTM+ VIFLYDQ+LFRP+I WS KF++E++ SW++ L R + ++ + Sbjct: 243 GYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEW 302 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 F + N E + + LD W +V I W Sbjct: 303 LAVFTNSFVN----------ARWLRIGEVKAVKEIDFKRQKRLDRLWTALVLIAVITGGW 352 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + +I+ D+ +V LG T RV++LI+++S++WIPVG+WIG RP ++ KIQP Sbjct: 353 FLLKFILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPI 412 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 Q +AAFPAN+F+PL V + ++L+ +W++ LMI GTQWYILFNVIAGAS+ P D Sbjct: 413 IQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYL 472 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A +F + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E SWG+I L+ TGLG Sbjct: 473 AADNFGLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGE 532 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 YI ST G FP++ LG +MC +VLA N +W PLY Sbjct: 533 YIQASTTAGDFPQIALGTAMMCVYVLAFNHLIWRPLYRLAEERF 576 >gi|148358279|ref|YP_001249486.1| ABC transporter permease [Legionella pneumophila str. Corby] gi|148280052|gb|ABQ54140.1| ABC transporter, permease protein [Legionella pneumophila str. Corby] Length = 579 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 272/584 (46%), Positives = 369/584 (63%), Gaps = 12/584 (2%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 Y P SR F N +DLL +L ++ L + P + D +PI+L+ +L Sbjct: 5 RFYFANPDKFSR--FINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNL 62 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P YA RT LRM A++ S+LFTF+ LAAK+RR +++P +DI+QSIP+L FL+ TV Sbjct: 63 PFYALRTVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVT 122 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F++L+P ++G E A+IFAIF++QVWNMTF YQSL +P DL EVS RLS WQ+FW Sbjct: 123 GFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMLRLSAWQRFW 182 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + VPFSM GL+WNMM+SMS WFFVV SE I V I LPG+GSYIALAI ++DL A+ Sbjct: 183 KVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHAV 242 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 YA+LTM+ VIFLYDQ+LFRP+I WS KF++E++ SW++ L R + ++ + Sbjct: 243 GYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEW 302 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 F + N E + + LD W +V I W Sbjct: 303 LAVFTNSFVN----------ARWLRIGEVKAVKEIDFKRQKRLDRLWTALVLIAVITGGW 352 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + +I+ D+ +V LG T RV++LI+++S++WIPVG+WIG RP ++ KIQP Sbjct: 353 FLLKFILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPI 412 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 Q +AAFPAN+F+PL V + ++L+ +W++ LMI GTQWYILFNVIAGAS+ P D Sbjct: 413 IQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYL 472 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 A +F + GW WW+ + LPGIFP+Y+TGAITA GGAWNASIV+E SWG+I L+ TGLG Sbjct: 473 AADNFGLKGWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGE 532 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 YI ST G FP++ LG +MC +VLA N +W PLY Sbjct: 533 YIQASTTAGDFPQIALGTAMMCVYVLAFNHLIWRPLYRLAEERF 576 >gi|73542714|ref|YP_297234.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gi|72120127|gb|AAZ62390.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 584 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 266/571 (46%), Positives = 366/571 (64%), Gaps = 12/571 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FD +++ II ++ Q+ VP + + + LD+ LP Y RT++RML+A+ Sbjct: 26 PNRFDFALLPIILAIIVMVAFAAQQMNVPFVPGEPMTVHLDIAYLPYYLMRTSIRMLAAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL+F+ +A LA+K+R VLVP LDI+QSIP+LGFL+ TV F+ L+PG +IG E Sbjct: 86 AASLVFSLAFAALASKNRTAEKVLVPALDILQSIPVLGFLSITVTGFIALFPGNLIGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DL E + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYIALAI++Q+L AI +A+L ML I +YD Sbjct: 206 MMSMSGGWFFVVASEAISVSGQDIRLPGIGSYIALAIQQQNLAAIGWAILAMLVGILVYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ W+++FR E + +SW+L L R++ ++R + + + Sbjct: 266 QLLFRPLVAWADRFRFETLSQDNEPESWLLDLLRRSEWVRALLARTAALAERTLAWGAR- 324 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + + R + V+ VA+ + + ++ + + +V Sbjct: 325 -----------RQAPATAEPDPRRVQWRERAGNAVILLVALAALSRVMYFVHSEVGWLEV 373 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +V+WLG +TM RV+VLI +A++IW+P+GI IG P ++ QP AQ LAAFPAN+ FPL Sbjct: 374 GHVLWLGTLTMVRVIVLIALAAVIWVPIGIRIGLNPSVARIAQPVAQFLAAFPANLMFPL 433 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV + + LNP +WLS L+IFGTQWYILFNV+AGAS P + K A +F + GW W+ Sbjct: 434 VVMLIVRFGLNPEIWLSPLLIFGTQWYILFNVVAGASGIPTELKLAARNFGLRGWLLWKR 493 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIV+E +WG L TGLG+YIAE+T +G FP + Sbjct: 494 FLIPAVFPSLLTGLVTAAGGSWNASIVAEYVTWGDRTLVATGLGSYIAETTARGDFPRIA 553 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 554 LGIGVMALFVVGFNRLLWNRLYQLAQERTRL 584 >gi|309780369|ref|ZP_07675120.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308921072|gb|EFP66718.1| ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 594 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 268/571 (46%), Positives = 364/571 (63%), Gaps = 10/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 34 PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 94 GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPIDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A+L ML I LYD Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 274 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 323 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL ++ A+ + ++ + + +V Sbjct: 324 ERTLSWGAERTRPTAAGGNGFLPRFPWSHRVADVIIILAALVAVAHVLQFVRSEVGWAEV 383 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +V WLG +TM RV++LI +A+++W+P+GI IG P+++ QP AQ LAAFPAN+ FPL Sbjct: 384 GHVFWLGFLTMVRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 443 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K A +F + GW W+ Sbjct: 444 AVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLWKR 503 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 504 FLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 563 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+++M FV+ NR LW+ LY RL Sbjct: 564 LGIVVMSLFVVGFNRLLWNRLYDIAQERTRL 594 >gi|187930633|ref|YP_001901120.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gi|187727523|gb|ACD28688.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] Length = 594 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 268/571 (46%), Positives = 363/571 (63%), Gaps = 10/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + ++LDV LP Y RT++RML A+ Sbjct: 34 PNRFDLALLPIILAAIVLVAYAAKQMNVPYTPGEHLDVSLDVIELPYYLLRTSIRMLLAL 93 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 94 GASLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 153 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 154 AAIFAIFTSQAWNMAFSLYQSFRTIPIDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 213 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A+L ML I LYD Sbjct: 214 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLPAIGWAILAMLIGIILYD 273 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 274 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 323 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL ++ A+ + ++ + + +V Sbjct: 324 ERTLSWGAERTRPTAAGGNGFLPRFPWSHRVADVIIILAALVAVAHVLQFVRSEVGWAEV 383 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +V WLG +TM RV++LI +A+++W+P+GI IG P+++ QP AQ LAAFPAN+ FPL Sbjct: 384 GHVFWLGFLTMVRVILLIALAALVWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 443 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V ++ + LNP +WLS LMIFGTQWYILFNVIAGASA P + K A +F + GW W+ Sbjct: 444 AVMLIARFALNPEIWLSPLMIFGTQWYILFNVIAGASAIPTELKLAARNFGLRGWLLWKR 503 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 504 FLIPAVFPNLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIA 563 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 564 LGIAVMSLFVVGFNRLLWNRLYDIAQERTRL 594 >gi|30248980|ref|NP_841050.1| putative nitrate transport system permease protein [Nitrosomonas europaea ATCC 19718] gi|30138597|emb|CAD84888.1| putative nitrate transport system permease protein [Nitrosomonas europaea ATCC 19718] Length = 580 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 287/580 (49%), Positives = 380/580 (65%), Gaps = 7/580 (1%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 +S R +DL+A +LV+G++ L ++ P I+L+ LP+Y R Sbjct: 7 SARLSHRFSAIFWDLVAVLLVLGMVVFLAQTSRDLMQPLAGPGETVISLEPSGLPEYVLR 66 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T+LRML+AMV+SL+FTF YAT AAKSRR G VL+P+LDI+QS+PILGF++ TVV+FM+ Sbjct: 67 TSLRMLAAMVLSLIFTFTYATWAAKSRRAGQVLIPLLDILQSVPILGFISVTVVFFMSFA 126 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+++GAEL AIFAIFTSQ WNM FS YQSL +P +L E SRSFRLS W +FW L VPF Sbjct: 127 PGRMLGAELVAIFAIFTSQAWNMAFSFYQSLRTVPTELVEASRSFRLSPWMRFWKLEVPF 186 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +MP LVWNMMMSMS GWFFVVASE I VG+TV+ LPGIGSYIALAI ++DL A+ A+ Sbjct: 187 AMPALVWNMMMSMSAGWFFVVASEAISVGNTVVTLPGIGSYIALAIDQRDLGAVGRAIAV 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ML VI +YDQLLFRP++ W ++FR E+ P SWVL R++ ++ Sbjct: 247 MLIVILIYDQLLFRPLVAWVDRFRFEQEADRNPPRSWVLMALRRSRWVAM-------AVV 299 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 PL + R + V LD W+ + + W+ ++ Sbjct: 300 PLVRMWRWTYRAGNDGASRELARTARNTMGSGVISWLDWLWYGAIAVICAVSMWKITVFV 359 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + T +V ++LGC+TM RV VLI +AS+IW+PVG+WIG P + IQP Q +AA Sbjct: 360 LQGVTPDEVGTTVFLGCVTMVRVFVLIAVASVIWVPVGVWIGLHPAAARIIQPVTQFMAA 419 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FPL VS + L+P++WLS LMI GTQWYILFNVIAGAS P + +++ + Sbjct: 420 FPANLLFPLAVSGIVVLRLDPDIWLSPLMILGTQWYILFNVIAGASTIPGELRDIGINLG 479 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + GW WWR I LP +FP+Y+TGA+TA GG+WNASIV+E+A+WG L+ GLGAYIAE+T Sbjct: 480 VRGWLWWRRIALPAVFPFYMTGAVTASGGSWNASIVAELANWGDTTLKANGLGAYIAEAT 539 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G F +VLG+ +M FV+ +NR W PLY+ R RL Sbjct: 540 AAGDFHRIVLGIAVMSAFVVLINRLFWRPLYILAERKFRL 579 >gi|270158574|ref|ZP_06187231.1| ABC transporter permease domain protein [Legionella longbeachae D-4968] gi|269990599|gb|EEZ96853.1| ABC transporter permease domain protein [Legionella longbeachae D-4968] Length = 537 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 261/544 (47%), Positives = 345/544 (63%), Gaps = 10/544 (1%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + +PI+LD +LP YA RT LRM A+ S++FTF AAK+RR +++ Sbjct: 1 MATPYQLGEQIPISLDPSNLPFYALRTVLRMFIALFFSIIFTFTVGLWAAKNRRAEQIII 60 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P +DI+QSIP+L FL+ TV F++L+P ++G E A+IFAIF +QVWNMTF YQS+ + Sbjct: 61 PAIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFCAQVWNMTFGFYQSIKTL 120 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P DL+EV+ FRLS WQ+FW L VPFSM L+WNMM+SMS WFFVV SE I V I Sbjct: 121 PHDLKEVASMFRLSAWQRFWKLEVPFSMSSLLWNMMVSMSASWFFVVLSEAISVAHQNIR 180 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281 LPG+GSYIALAI+++DL A+ YA+LTM+ VIFLYDQ+ FRP+I WS KF+ E + Sbjct: 181 LPGVGSYIALAIQQRDLHAVGYAILTMVIVIFLYDQIFFRPLIAWSEKFKAETSHDEAEY 240 Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341 SW++ R + ++ F N E+ + + Sbjct: 241 QSWLVDWMRGSRLMKQFAEIIGVFTDHFVN----------ARWMRLNESKAVKEIDLKKQ 290 Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401 LD FW V AW + +I+ D+++V LG T RV+ LII++S+IW Sbjct: 291 RRLDRFWGAFVFLCVCSGAWFLLRFILAELKISDIVHVFLLGAATGTRVICLIILSSLIW 350 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 IPVG+WIG RP I+ KIQP Q +AAFPAN+F+PL V + +HLN +W++ LMI GTQ Sbjct: 351 IPVGVWIGMRPRIAQKIQPVIQFVAAFPANLFYPLFVIAIVKFHLNVEIWVTPLMILGTQ 410 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 WYILFNVIAGASA P + A +F + GW WW+ + +PGIFP+Y+TGAITA GGAWNAS Sbjct: 411 WYILFNVIAGASAIPRELYLAADNFGLKGWLWWKRLAVPGIFPFYITGAITAAGGAWNAS 470 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 IV+E SWG+ LR TGLG YI ST G FP++ LG +MC +VLA N +W PLY Sbjct: 471 IVAEFVSWGNTTLRATGLGEYIQASTATGDFPKIALGTAMMCLYVLAFNHLIWRPLYRLA 530 Query: 582 TRCL 585 Sbjct: 531 EERF 534 >gi|78221745|ref|YP_383492.1| binding-protein dependent transport system inner membrane protein [Geobacter metallireducens GS-15] gi|78193000|gb|ABB30767.1| Binding-protein-dependent transport systems inner membrane component [Geobacter metallireducens GS-15] Length = 579 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 284/579 (49%), Positives = 377/579 (65%), Gaps = 11/579 (1%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRT 68 F + PN +DL AF LV+GII +L G +E +P VP ++ D LP YA RT Sbjct: 10 FRGKLTTPNAWDLAAFFLVMGIIALLAWGSREMALPYVPGKTVPSLSPDPWHLPYYALRT 69 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 +RM +A+ +SL FT YATLAAKSRRLG +LVP LDI+QS+PILGFL+ TV F++L+P Sbjct: 70 VIRMGAALGLSLAFTLTYATLAAKSRRLGPILVPALDILQSVPILGFLSVTVTGFISLFP 129 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G ++G E A+IFAIFTSQ WNM FS YQS+ +P+DL E + F LS W++FW + PF Sbjct: 130 GSLLGVEAASIFAIFTSQAWNMAFSFYQSMKTVPKDLGEAATIFGLSPWKRFWRVEAPFG 189 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P L+WN+MMS+SGGWFFVVASE I VG T + LPGIGSY+ALAI QDL AI +A+ TM Sbjct: 190 VPPLIWNIMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYMALAIHRQDLGAIGWALATM 249 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 VIFLYDQL FRP++ W+ KFR+E T P +SW+L +F +T + + + Sbjct: 250 ALVIFLYDQLFFRPLVAWAEKFRVELTESGAPPESWLLTIFTRTRLMGRLLRLIGALPAR 309 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 L+ + R R+ V +D W + A+ W+ ++ Sbjct: 310 LAERFPRRRRLPRRSRYPIRPE---------VQRTIDRAWNAIFALAALYGLWKLATFV- 359 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + ++VL V LG T+ RV VL+ +AS++WIPVG+ IG P ++++QP AQ LAAF Sbjct: 360 SVIPLREVLSVFGLGLATLARVTVLLALASLLWIPVGVRIGLNPRWATRVQPVAQFLAAF 419 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PAN+FFP+VV + + LNP +W + LMI GTQWYILFNVIAGASA PND +E A++ + Sbjct: 420 PANLFFPVVVVLIVRFRLNPEIWTAPLMILGTQWYILFNVIAGASAIPNDLREAATNLGL 479 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +GW WR ++LPGIFP VTG +TA GG WNASIV+E+ SWG L TGLG+ IA TE Sbjct: 480 SGWELWRRLLLPGIFPSLVTGLVTASGGTWNASIVAEMVSWGPTTLTATGLGSAIARWTE 539 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +G +P +VLG+ +M FV+ LNR W LYL RL Sbjct: 540 QGDYPHIVLGIAVMSIFVVCLNRLFWRRLYLLAQTRYRL 578 >gi|15837013|ref|NP_297701.1| ABC transporter nitrate permease [Xylella fastidiosa 9a5c] gi|9105249|gb|AAF83221.1|AE003892_6 ABC transporter nitrate permease [Xylella fastidiosa 9a5c] Length = 584 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 292/576 (50%), Positives = 384/576 (66%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN++DL+A L++ + LLHG + P + + ++LD LP+Y RTTLRM Sbjct: 19 RAQLPNVYDLVALALILLLGIALLHGAEGARAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +AM SLLFTFV ATLAAKS+R ++VP LD++QS+P+LGFLTFTV +F+ L+PG + Sbjct: 79 FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 GAE A++FA+FTSQ WNM FS YQSL +PRDL+EVSR F S W +FW L VPF+MPGL Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI Q A+ +A+ M +I Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMAFLI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQLLFRP++VW++KFR+E T G SWV L +T L+ L Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLKR-----------LVAP 307 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQR-VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + +L + + ++R+ + + R S D W V+ VA + + Sbjct: 308 LTRLWQRVLLLRWTKRNRVTVVPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 +D+ + T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP Q LAAFPAN Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 V FP V + NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A + + W Sbjct: 428 VLFPFAVVAIVTTGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+ GLG+YIA +TE G Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P V+LGV++M FV NR LW L+++ R LRL Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583 >gi|300702458|ref|YP_003744058.1| binding-protein-dependent transporter [Ralstonia solanacearum CFBP2957] gi|299070119|emb|CBJ41408.1| Putative binding-protein-dependent transporter [Ralstonia solanacearum CFBP2957] Length = 586 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 270/571 (47%), Positives = 365/571 (63%), Gaps = 10/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + + LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEALDVRLDVVQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 AGSLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL S ++ A+ W + ++ + + +V Sbjct: 316 ERTLAWGAERTRPKASGSNSFLPRFPWSGRVADVIIMLAALAALWHILQFVRSEVGWAEV 375 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V+WLG +TM RV++LI +A++IW+P+GI IG P+++ QP AQ LAAFPAN+ FPL Sbjct: 376 GRVVWLGVLTMTRVLLLIALAAVIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 435 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS P + + A +F + GW W+ Sbjct: 436 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASGIPMELRLAARNFGLRGWLMWKR 495 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 496 FLIPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTSKGDFPRIA 555 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LYL RL Sbjct: 556 LGIAVMSLFVVGFNRLLWNRLYLLAQERTRL 586 >gi|317407655|gb|EFV87594.1| ABC transport system permease [Achromobacter xylosoxidans C54] Length = 577 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 255/569 (44%), Positives = 363/569 (63%), Gaps = 11/569 (1%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 N +D LV+G++ + +G + + P + + +PI+LD LP Y RT LRM +A+ Sbjct: 20 NRWDWALLPLVLGVLAAMAYGASQMSRPFAVGEELPISLDPIYLPYYLLRTILRMFTALA 79 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 SLLF+FV+A +AAK R ++P+LDI+QS+PILGF + F+ L+PG ++G E A Sbjct: 80 FSLLFSFVFAAIAAKFRTAEKAMIPMLDILQSVPILGFQAIAIAPFIALFPGNLLGVECA 139 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS+YQS+ +P +L E +R FRLSGWQ+FW L +P++ PGL+WNMM Sbjct: 140 AIFAIFTSQAWNMAFSLYQSMRTVPAELNEAARVFRLSGWQRFWRLELPYATPGLLWNMM 199 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MSMSGGWFF+VA+E I V I LPGIGSYIA+AI ++ AI +A+ M+ I LYDQ Sbjct: 200 MSMSGGWFFLVAAEAISVAGQDIKLPGIGSYIAVAIDAENGRAIAWAIGAMMAGILLYDQ 259 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L FRP++ W++KFR E + SW+L R++ +++ + W ++ Sbjct: 260 LFFRPLLAWADKFRFEESQADVAQQSWLLDWTRRSRWMQALSNMFW----------ARMR 309 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 R LG + ++ + W ++ A+ ++ + ++ + +VL Sbjct: 310 RALGWFSVPYDGTSIRARAKAPDPRW-TRIWDSLLAAAALLATYKLVVFVHQEVGWGEVL 368 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 +V+ LG IT+ RV+VLI +AS+IW+P+ +WIG RP S ++Q AQ LAAFP N+ FP V Sbjct: 369 HVVGLGGITLARVMVLIGLASLIWVPIAVWIGLRPRYSQRVQAVAQFLAAFPVNLLFPAV 428 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + LNPN+WLS L+IFGTQWYILFNV+AGAS PN+ + A + + GW WR + Sbjct: 429 VFVMVAFKLNPNIWLSPLIIFGTQWYILFNVVAGASTIPNELRLAAGNLGLKGWLLWRRV 488 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 LP +FP ++TGAITA GG+WNASIV+E SWG+ L GLG+YI + TE+G F + L Sbjct: 489 YLPAVFPSFITGAITASGGSWNASIVAEYVSWGNTSLVADGLGSYIKQMTEQGDFHRIAL 548 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 G+ +M FV+ LNRF W LYL R Sbjct: 549 GIGVMSIFVMLLNRFFWRKLYLLAEDRGR 577 >gi|83749465|ref|ZP_00946456.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|207722076|ref|YP_002252514.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|207744869|ref|YP_002261261.1| transmembrane protein [Ralstonia solanacearum IPO1609] gi|83723862|gb|EAP71049.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|206587250|emb|CAQ17834.1| transmembrane protein [Ralstonia solanacearum MolK2] gi|206596279|emb|CAQ63206.1| transmembrane protein [Ralstonia solanacearum IPO1609] Length = 586 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 271/571 (47%), Positives = 365/571 (63%), Gaps = 10/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FDL +++ I ++ + ++ VP + + + LDV LP Y RT++RML A+ Sbjct: 26 PNRFDLALLPIILAAIVLVAYAARQMNVPYIPGEALDVRLDVVQLPYYLLRTSIRMLLAL 85 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SL F+F +A +A+K+R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 86 AGSLAFSFAFAAIASKNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGNLVGVEC 145 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DLEE + FRLS WQ+FW L VPF+MPGL+WNM Sbjct: 146 AAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNM 205 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYI+LAI++Q+L AI +A++ ML I LYD Sbjct: 206 MMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISLAIQQQNLHAIGWAIVAMLIGILLYD 265 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP+I W+++FR + + SW+L L R++ +++ + L Sbjct: 266 QLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKAL----------LERTAALA 315 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL S V+ A+ W + ++ + + +V Sbjct: 316 ERTLAWGAERTRPKASNSNSFLPRFPWSGRVADVVIMLAALAALWHILQFVRSEVGWAEV 375 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V+WLG +TM RV++LI +A++IW+P+GI IG P+++ QP AQ LAAFPAN+ FPL Sbjct: 376 GRVVWLGVLTMTRVLLLIALAAVIWVPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPL 435 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV ++ + LNP +WLS LMIFGTQWYILFNVIAGAS P + + A +F + GW W+ Sbjct: 436 VVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASGIPMELRLAARNFGLRGWLMWKR 495 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIVSE SWG L TGLG+YIAE T KG FP + Sbjct: 496 FLIPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTSKGDFPRIA 555 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LYL RL Sbjct: 556 LGIAVMSLFVVGFNRLLWNRLYLLAQERTRL 586 >gi|29655059|ref|NP_820751.1| ABC transporter permease protein [Coxiella burnetii RSA 493] gi|161829804|ref|YP_001597596.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|29542328|gb|AAO91265.1| ABC transporter permease protein [Coxiella burnetii RSA 493] gi|161761671|gb|ABX77313.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] Length = 581 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 276/572 (48%), Positives = 372/572 (65%), Gaps = 10/572 (1%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM A Sbjct: 19 IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 M SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 79 MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MMSMSG W F+ ASE I V + I LPGIGSY ALAI+ + +AI+Y ++TM VI LY Sbjct: 199 TMMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALY 258 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 DQLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ + + N Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSLAGNAIVNWRLF 318 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R + + N + +L I W ++ + +I+ + + Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWNVLLILGVAAALFLLSKFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI++E SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LNR +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580 >gi|153206202|ref|ZP_01945465.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212217904|ref|YP_002304691.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] gi|120577332|gb|EAX33956.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012166|gb|ACJ19546.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] Length = 581 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 276/572 (48%), Positives = 371/572 (64%), Gaps = 10/572 (1%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM A Sbjct: 19 IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 M SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 79 MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MMSMSG W F+ ASE I V + I LPGIGSY ALAI+ + +AI+Y ++TM VI LY Sbjct: 199 TMMSMSGSWIFLTASESISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALY 258 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 DQLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ + N Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSLAGNATVNWRLF 318 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R + + N + +L I W ++ + +I+ + + Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWKVLLILGVAAALFLLSKFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI++E SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LNR +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580 >gi|165919264|ref|ZP_02219350.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|165917058|gb|EDR35662.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] Length = 581 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 276/572 (48%), Positives = 371/572 (64%), Gaps = 10/572 (1%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM A Sbjct: 19 IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 M SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 79 MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MMSMSG W F+ ASE I V + I LPGIGSY ALAI+ + +AI+Y ++TM VI LY Sbjct: 199 TMMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALY 258 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 DQLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ + N Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSLAGNATVNWRLF 318 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R + + N + +L I W ++ + +I+ + + Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWKVLLILGVAAALFLLSKFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI++E SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LNR +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580 >gi|187926710|ref|YP_001893055.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gi|241665042|ref|YP_002983401.1| binding-protein-dependent transporters inner membrane component [Ralstonia pickettii 12D] gi|187728464|gb|ACD29628.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gi|240867069|gb|ACS64729.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] Length = 577 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 292/571 (51%), Positives = 383/571 (67%), Gaps = 12/571 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P DLLA +LV+G++ +L G ++ P I+L +LP Y RT RM +A+ Sbjct: 18 PRWRDLLAMLLVLGMVLLLGSGARQMVGPLVAASQPEISLSPLALPAYVLRTVTRMFAAL 77 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +SLLFTF YATLAAKSRR MVL+P+LD++QS+PILG+L+FTVV+FM L+PG V+GAEL Sbjct: 78 ALSLLFTFTYATLAAKSRRAEMVLIPLLDVLQSVPILGYLSFTVVFFMALFPGNVLGAEL 137 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AA+FAIFTSQ WNM FS YQ+L IP DL+E SR FR S WQ+FW L VPF+MPGLVWNM Sbjct: 138 AAVFAIFTSQAWNMAFSFYQALRTIPADLDEASRGFRASSWQRFWRLEVPFAMPGLVWNM 197 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VGD + LPG+G+Y+A AI ++DL A+ +A+L M I LYD Sbjct: 198 MMSMSGGWFFVVASEAISVGDVRVALPGVGAYVARAIAQRDLGAVGWAILAMAVAIVLYD 257 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRPM+ W++KFR E+T P SW+L LF ++ +++ +P+ + + Sbjct: 258 QLLFRPMVAWADKFRFEQTASQMPPRSWLLDLFHRSAWVQ-------RMMAPVGIALHQA 310 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R +R+ P + +R + D W + A + DV Sbjct: 311 AR--AQLRWPLPAMRWKGAMPRR---LGDALWLGLCAAGAAYAMLALYRLAGRTLAWTDV 365 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V G T+ RV+VLI +ASI+W+PVG+ +G P ++++QP AQ LAAFPAN+ FP+ Sbjct: 366 ATVARSGAFTLLRVMVLIALASIVWVPVGVAVGLSPRWTARVQPLAQFLAAFPANLLFPV 425 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV + +H + ++WLSLLMI GTQWYILFNVIAGA+AFP+D +E A+SF I WWR Sbjct: 426 VVFLIVRFHGSVDVWLSLLMILGTQWYILFNVIAGAAAFPSDLRETATSFRIRAPNWWRK 485 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LPGI PYYVTG ITA GGAWNASIV+E SWG +HL+ GLGAY+A+ T G +P + Sbjct: 486 VMLPGILPYYVTGVITASGGAWNASIVAEAVSWGAVHLQAQGLGAYVAQQTAAGDYPRIA 545 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ M V+A NR LW PLY Y R +RL Sbjct: 546 LGIAAMSLMVIATNRLLWRPLYAYAERRMRL 576 >gi|167561672|ref|ZP_02354588.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147] Length = 577 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 284/583 (48%), Positives = 374/583 (64%), Gaps = 12/583 (2%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 ++L R D +A +LV+ +I +L G ++ +P D+ I+L +LP Y Sbjct: 6 DLLAGGRWRPRTLGWRDAIAVLLVLALIVLLGSGARQMALPLDVARPEAISLSPLALPGY 65 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RT LRML+A+ S FTF YATLAA+SR VL+P+LD++QS+PILG+L+FTVV+F+ Sbjct: 66 ALRTVLRMLAALGASFAFTFAYATLAARSRAAEAVLIPLLDVLQSVPILGYLSFTVVFFL 125 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 ++ P GAELAAIFAIFTSQ WNM FS YQSLC +PRDL+E SRS R +GWQ+FW L Sbjct: 126 SITPSSTFGAELAAIFAIFTSQAWNMAFSFYQSLCTVPRDLDEASRSLRQTGWQRFWRLE 185 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VPF+MPGL WN MMSMSGGWFFVVASE I VGD I LPG+G+Y+A AI E+DL A+ YA Sbjct: 186 VPFAMPGLAWNAMMSMSGGWFFVVASEAISVGDLHIALPGVGAYVARAIAERDLAAVGYA 245 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + M I LYDQLLFRPM+ W++KFR ++T SW+L L + + + +G Sbjct: 246 IAAMTIAIVLYDQLLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRVG----- 300 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +PL + + R + P + L I WF + + Sbjct: 301 --TPLGAMLHRAARARLSLGARLPAHERSLSR-----RFGRIVWFSLCAAGIVYAGIGLF 353 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + T+ DV+ V G +T+ RV+VLI +AS +W+P+G+ IG RP ++ +QP AQ Sbjct: 354 RFAAPVLTWADVVDVARNGALTLARVLVLIGVASAVWVPIGVLIGLRPRATAFVQPIAQF 413 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+ FP V ++++ L P +WLS LMI GTQWYILFNVIAGA+ FP+D KE A+ Sbjct: 414 LAAFPANLLFPPAVFAIAHFELTPAIWLSPLMILGTQWYILFNVIAGATVFPDDLKEAAA 473 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S + WW ++LPGI PYYVTGAITA GGAWNASIVSE+ WGH L +GLGAY+A Sbjct: 474 SLRVRTPTWWTKVVLPGILPYYVTGAITASGGAWNASIVSELVGWGHTTLDASGLGAYVA 533 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 T G +P + LGV M V+A+NR +W PLY + R RL Sbjct: 534 RMTAAGDYPRIALGVAAMSLLVIAMNRLMWRPLYAFAERRSRL 576 >gi|212211812|ref|YP_002302748.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] gi|212010222|gb|ACJ17603.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] Length = 581 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 274/572 (47%), Positives = 372/572 (65%), Gaps = 10/572 (1%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM A Sbjct: 19 IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 M SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 79 MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPPDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MMSMSG W F+ ASE I + + I LPGIGSY ALAI+ + +AI+Y ++ M VI LY Sbjct: 199 TMMSMSGSWIFLTASEAISIANHNIMLPGIGSYTALAIEHANKMAIIYVIVMMFIVIALY 258 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 DQLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ + + + N Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSSAGNAIVNWRLF 318 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R + + N + +L I W ++ + +I+ + + Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWNVLLILGVAAALFLLSKFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI++E SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIIAEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LNR +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNRTMWRPLYRLAEERFRV 580 >gi|114326819|ref|YP_743976.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114314993|gb|ABI61053.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 574 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 309/582 (53%), Positives = 406/582 (69%), Gaps = 12/582 (2%) Query: 4 YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63 + P SRR PN+FDL++ +V + ++H + T VP D ++LD +LP Sbjct: 3 ETVFPALASRRRLPNLFDLVSIAVVFAALVAVVHVTRGTLVPLDDRYAHAVSLDPWNLPA 62 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 YA RTTLRML A+ +L FTF YAT AAKSRR M+L+P+LDI+QS+PILGFLTFTVV+F Sbjct: 63 YAFRTTLRMLLALAAALFFTFTYATWAAKSRRAAMLLIPMLDILQSVPILGFLTFTVVFF 122 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 MNL+PG+V+GAELA+IFAIFTSQ WNM FS YQSL +P DL E +R+FRLS WQ+FW L Sbjct: 123 MNLFPGQVLGAELASIFAIFTSQAWNMAFSFYQSLTTLPGDLVEATRAFRLSPWQRFWKL 182 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 VPF+MPGLVWN MMSMSGGWFFVVASE + VGD LPGIGSY+ALA+++QD+ AI Y Sbjct: 183 EVPFAMPGLVWNAMMSMSGGWFFVVASEAVSVGDNTWMLPGIGSYVALALRQQDMAAIGY 242 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 A+L M VI LYDQLLFRP++ WS KFR E T G + W+L L R+T +LR Sbjct: 243 AILAMAVVILLYDQLLFRPLVAWSEKFRFETTQGSTSEEPWLLRLLRRTAWLRAGSELLA 302 Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363 + F+ +N I F P + ++ + S ++D+ W +V + + AW Sbjct: 303 SGFNAFTNL---------RIGFRLPR---LIRASNQPSRIVDMLWGLIVFAMLVWCAWHI 350 Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 ++ DVL + +GCITM RV+VL+I+A++IW+P+G+ IG RPH++ +QP Q Sbjct: 351 YAFLSGRIAPSDVLQAVLMGCITMLRVIVLMIVATLIWVPIGVAIGLRPHVARFVQPLVQ 410 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 LAAFPAN+FFPL V ++ + LNP++WL+ LMI G QWYI+FNVIAGA+AFP D +E A Sbjct: 411 FLAAFPANLFFPLFVLVIARFSLNPDIWLTPLMILGAQWYIMFNVIAGAAAFPGDMQEAA 470 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 FHI G+ WWR +ILPGIFPYY+TGAITA GGAWNA+IVSEV +WG L+ GLG +I Sbjct: 471 RGFHIRGFLWWRRVILPGIFPYYITGAITASGGAWNAAIVSEVVTWGPNTLQAHGLGRFI 530 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 A+++ G++P +LGV +M FV+ NR LW PL+ + TR L Sbjct: 531 ADASADGNWPRTILGVAVMSAFVVGFNRALWKPLFNFATRRL 572 >gi|114332379|ref|YP_748601.1| binding-protein-dependent transport systems inner membrane component [Nitrosomonas eutropha C91] gi|114309393|gb|ABI60636.1| binding-protein-dependent transport systems inner membrane component [Nitrosomonas eutropha C91] Length = 579 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 286/577 (49%), Positives = 385/577 (66%), Gaps = 10/577 (1%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 SRR +D +A +LV+G++ L ++ P I+LD +LP+YA RT+LR Sbjct: 11 SRRFSALFWDGVAALLVLGLVVFLAQASRDFMQPLVESGHDVISLDPSALPEYALRTSLR 70 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML AMV+SL+FTF YAT AAKS R +L+P+LDI+QS+P+LGF++ TVV+F++ PGK+ Sbjct: 71 MLLAMVLSLIFTFTYATWAAKSWRAEQILIPLLDILQSVPVLGFISITVVFFLSFAPGKM 130 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +GAELA++FAIFTSQ WNM FS YQSL +PR+L+EVSRSFRLS W +FW L VPF+MP Sbjct: 131 LGAELASVFAIFTSQAWNMAFSFYQSLHTVPRELDEVSRSFRLSPWMRFWKLEVPFAMPA 190 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 L+WNMMMSMSG WFFVVASE I VGDT++ LPGIGSYIALAI ++DL AI +A+ ML V Sbjct: 191 LIWNMMMSMSGSWFFVVASEAISVGDTIVTLPGIGSYIALAIDQRDLGAIGWAIAVMLIV 250 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGI-YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310 I +YDQLLFRP++ W+++FR E+ TG P SWVL + ++ ++ F + Sbjct: 251 ILIYDQLLFRPLVAWADRFRFEQETGGMPPPHSWVLTVLHRSQWITFTTALFARIWRWTY 310 Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 ++ R + F + + +D W+ + V I+W+ +I+ Sbjct: 311 RKSQQPARK---------KAFTWKGTGTNLKPWVDWLWYGTITVVCAIISWKITFFILQE 361 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 +V ++LG ITM RV VLI +AS+IW+PVG+W+G RP + QP AQ +AAFPA Sbjct: 362 VALAEVGTAMFLGFITMVRVFVLIAVASVIWVPVGVWLGLRPGAARIAQPIAQFMAAFPA 421 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FP V + L+P++WLS LMI GTQWYILFNVIAGAS P + +++++ + G Sbjct: 422 NLLFPPAVYGIVVLQLDPDIWLSPLMILGTQWYILFNVIAGASTIPGELHDISANLGVRG 481 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W WWR I LP +FP+YVTGAITA GG+WNASIV+E+ SWG L+ GLGAYI E+T G Sbjct: 482 WLWWRRIALPAVFPFYVTGAITASGGSWNASIVAEIVSWGSTTLQAHGLGAYITEATVAG 541 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 F V LG+ +M FV+ +NR W PLY R RL Sbjct: 542 DFHRVALGIAVMSAFVVVINRLFWRPLYALAERKFRL 578 >gi|328543644|ref|YP_004303753.1| nitrate transporter permease [polymorphum gilvum SL003B-26A1] gi|326413389|gb|ADZ70452.1| Putative nitrate transport system permease protein [Polymorphum gilvum SL003B-26A1] Length = 577 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 293/582 (50%), Positives = 383/582 (65%), Gaps = 11/582 (1%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 R +++DL+A +LV+G + L + P D I LD +LP YA Sbjct: 6 RQTSLAHGRRSTSLWDLIAILLVLGALVFLAEASRGLMQPLPAADENVIVLDPAALPGYA 65 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + TTLRML+AMV+SL+FTF YAT AAKS R VL+P+LDI+QS+PILGF++ TVV+F++ Sbjct: 66 AHTTLRMLAAMVLSLVFTFTYATWAAKSHRAERVLIPLLDILQSVPILGFISVTVVFFLS 125 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L PG ++GAELAA+FAIFTSQ WNM FS YQSL +P +L E +RSFRLS W +FW L V Sbjct: 126 LAPGMMLGAELAAVFAIFTSQAWNMAFSFYQSLRTVPAELAEAARSFRLSPWMRFWRLEV 185 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 PF+MP LVWNMMMSMSGGWFFVVA+E I VG T + LPGIGSYIALAI E+DL AI +A+ Sbjct: 186 PFAMPALVWNMMMSMSGGWFFVVAAEAISVGGTTVTLPGIGSYIALAIAERDLGAIGWAI 245 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 TML VI +YDQLLFRP++ W+++FR E+ TG+ P SWVL R++ + Sbjct: 246 GTMLLVILIYDQLLFRPLVAWADRFRFEQETGVAPPRSWVLMTLRRSRLV---------- 295 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 + + ++ R R + LD V VA+ ++ Sbjct: 296 -ARATASLGAAWRWSYRALPKPGAGSASAAHPGRGARWLDRLLLGSVAVVALLGVVKAAQ 354 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 ++ DV + LG TM RV VLI IASIIW+PVG+WIG RP + QP AQ + Sbjct: 355 FLTAGVGLADVATAVLLGFATMIRVFVLIAIASIIWVPVGVWIGLRPGAARIAQPVAQFM 414 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AAFPAN+ FPL VS + + L+P++WLS LMI GTQWYILFNV+AGAS P++ +++ +S Sbjct: 415 AAFPANLLFPLAVSVIVGFRLDPDIWLSPLMILGTQWYILFNVVAGASTIPSELRDIGAS 474 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + GW WW+ I LP +FP+YVTGAITA GG+WNASIV+EVASWG L+ GLGA+IA+ Sbjct: 475 LRVRGWLWWQRIALPAVFPFYVTGAITASGGSWNASIVAEVASWGQDRLQAHGLGAFIAD 534 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +TE G F +VLG+ +M FV+ +NR W PLY + R RL Sbjct: 535 ATEAGDFHRIVLGIAVMSAFVVVINRIFWRPLYAFAERKYRL 576 >gi|154705925|ref|YP_001423658.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] gi|154355211|gb|ABS76673.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] Length = 581 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 276/572 (48%), Positives = 371/572 (64%), Gaps = 10/572 (1%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 PN +D++A + V+ +I +L +G DI + + I+LD LP YA RT LRM A Sbjct: 19 IPNYWDVIAAIFVLAVIVLLGYGANAMVGRFDIGEPISISLDPRVLPYYALRTILRMGIA 78 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 M SLLFTFV+ T AAKSR+ V++P +DI+QS+P+LGFLT TV+ F+ L+ G ++G E Sbjct: 79 MFFSLLFTFVFGTWAAKSRQAERVIIPAIDILQSVPVLGFLTITVMAFIALFHGSMLGPE 138 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 AAIFAIFT+QVWNMT S YQSL +P DL E + F+LS WQ+FW + VPF+MPGL+WN Sbjct: 139 SAAIFAIFTAQVWNMTLSFYQSLRTVPLDLSEAASVFQLSAWQRFWRVEVPFAMPGLLWN 198 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MMSMSG W F+ ASE I V + I LPGIGSY ALAI+ + +AI+Y ++TM VI LY Sbjct: 199 TMMSMSGSWIFLTASEAISVANHNIMLPGIGSYTALAIEHANKMAIIYVIVTMFIVIALY 258 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 DQLLFRP++ W+ KF E + G A SWVL LF++T FLRFIG+ + + N Sbjct: 259 DQLLFRPLVAWAEKFEAEVSVGGTEAQSWVLNLFQRTRFLRFIGHYFSLAGNAIVNWRLF 318 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R + + N + +L I W ++ + +I+ + + Sbjct: 319 QHRRPRKL----------IEPNYQFRRLLTIAWNVLLILGVAAALFLLSKFILAEVRWNE 368 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL+V +LG +T RV +LII++S+IW+P+G+W+G RP+ S +QP AQ AAFPAN+ FP Sbjct: 369 VLHVFYLGLVTGLRVTILIIVSSLIWVPIGVWVGLRPNASRIVQPIAQFFAAFPANLLFP 428 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + Y LN N+W S LMI G QWYILFNV+AG A P + + ++ GW WW+ Sbjct: 429 LVVMVIIRYGLNVNVWTSPLMILGAQWYILFNVVAGTMAVPKNLHHAVETLNVKGWLWWK 488 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ILPGIFPYY+TGAITA GGAWN SI+SE SWG+ HL TGLGAYIA +++G FP + Sbjct: 489 RFILPGIFPYYITGAITAAGGAWNISIISEAVSWGNTHLHATGLGAYIAAVSQQGDFPRL 548 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV++M +V+ LN +W PLY R+ Sbjct: 549 ALGVMVMSLYVVILNCTMWRPLYRLAEERFRV 580 >gi|161522946|ref|YP_001585875.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] gi|160346499|gb|ABX19583.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] Length = 600 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 265/571 (46%), Positives = 362/571 (63%), Gaps = 12/571 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P DL A ++V+G + + ++ P + I+L +LP Y RT RM +A+ Sbjct: 41 PGWRDLAAMLIVVGFLLLAGISARQMAGPLAVAHPPAISLSPAALPGYTLRTVARMFAAL 100 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + S++FTFVYAT AA+SRR VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GAE Sbjct: 101 LASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGAEC 160 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNMTFS YQ+L +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN Sbjct: 161 AAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVPFAMPGLVWNA 220 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VG+ + LPG+G+Y+A AI +DL A+ +A++ M I LYD Sbjct: 221 MMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVLYD 280 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ WS +FR + SW+L LF ++ ++ + + Sbjct: 281 QLLFRPLVAWSERFRYGDAAPTVASRSWMLDLFHRSRWMGRASGPVRALLRRAARARPRG 340 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + R P D+ WF + A++ T+ D+ Sbjct: 341 FMSAWRDRIVLPPR------------TGDVLWFALCGAGCAYAAYELFRLGRATLTWTDL 388 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V G +T RV VL+ +AS+IW+P+GI IG RP ++++IQP Q LAAFP N+ FP+ Sbjct: 389 RVVASEGGLTFVRVTVLVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPTNLLFPV 448 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + L P++WL LMI G QWY+LFNVIAGASAFP D +E A+ F + WWR+ Sbjct: 449 AVFAIVRLRLEPDIWLCPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPATWWRH 508 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LPG+ PY+VTGAI A GGAWNASIV+E SWG L GLGAYIA T+ G +P + Sbjct: 509 VMLPGVLPYFVTGAIAASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIA 568 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV +M V+A NR +W P+Y + R RL Sbjct: 569 LGVAVMSLLVIATNRLVWRPMYAFAERRTRL 599 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 91/263 (34%), Gaps = 4/263 (1%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 L + + ++ ML + F ++ G++ + + Sbjct: 31 LRGGRWTLPVPGWRDLAAMLIVVGFLLLAGISARQMAGPLAVAHPPAISLSPAALPGYTL 90 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 T+ R+ ++ + + + P +L + P + V Sbjct: 91 RTVARMFAALLASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSL 150 Query: 445 H----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L + W + F+ P D E + SF ++ W+ + + +P Sbjct: 151 FPGRILGAECAAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVP 210 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P V A+ + G W + SE + G++H+ G+GAY+A++ V ++ Sbjct: 211 FAMPGLVWNAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIV 270 Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583 M ++ ++ L+ PL + R Sbjct: 271 AMSVAIVLYDQLLFRPLVAWSER 293 >gi|167835552|ref|ZP_02462435.1| ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 578 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 282/570 (49%), Positives = 373/570 (65%), Gaps = 11/570 (1%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I +L G+++ ++P DI I+L +LP Y RT LRML+A+ Sbjct: 19 GWRDAVALLLVLALIVLLGSGVRQMSLPLDIARPEAISLSPLALPGYVLRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S+ FTF YA LAAKSR VL+P+LD++QS+PILG+L+FTVV+F+++ PG +GAELA Sbjct: 79 ASIAFTFAYAPLAAKSRTAETVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGTTLGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MSMSGGWFFVVASE I VG I LPG+G+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 MSMSGGWFFVVASEAISVGGLHIALPGVGAYVARAIAERDLAAVGWAIAAMTIAITLYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G +PL + + Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRVG-------APLGATLHRAA 311 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 R R L + I W + +A+ + ++ DV+ Sbjct: 312 RA----RLSLGALRLSTRERALSRRIARIVWLSLCAALAVYAGVALLRIAAPALSWFDVV 367 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+PVG+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 368 DVARNGALTLARVLVLIGVATVVWVPVGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 427 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGA+AFP+D KE A+S + WWR + Sbjct: 428 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGATAFPDDLKEAAASLRVRTPTWWREV 487 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH + GLGAYIA +T G +P + L Sbjct: 488 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTIDAAGLGAYIARTTAAGDYPRIAL 547 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 548 GVAAMSLLVIAMNRLIWRPLYAFAERRSRL 577 >gi|28199540|ref|NP_779854.1| ABC transporter nitrate permease [Xylella fastidiosa Temecula1] gi|182682275|ref|YP_001830435.1| binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa M23] gi|28057655|gb|AAO29503.1| ABC transporter nitrate permease [Xylella fastidiosa Temecula1] gi|182632385|gb|ACB93161.1| binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa M23] gi|307578552|gb|ADN62521.1| ABC transporter nitrate permease [Xylella fastidiosa subsp. fastidiosa GB514] Length = 584 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 293/576 (50%), Positives = 385/576 (66%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN++DL+A L++ + LLHG + + P + + ++LD LP+Y RTTLRM Sbjct: 19 RAQLPNVYDLVALALILLLGIALLHGAEGASAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +AM SLLFTFV ATLAAKS+R ++VP LD++QS+P+LGFLTFTV +F+ L+PG + Sbjct: 79 FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 GAE A++FA+FTSQ WNM FS YQSL +PRDL+EVSR F S W +FW L VPF+MPGL Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI Q A+ +A+ M +I Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMALLI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQLLFRP++VW++KFR+E T G SWV L +T L+ L Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLKR-----------LVAP 307 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQR-VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + +L + + ++R+ L + R S D W V+ VA + + Sbjct: 308 LTRLWQRVLILRWTKRNRVTVLPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 +D+ + T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP Q LAAFPAN Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 V FP V + NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A + + W Sbjct: 428 VLFPFAVVAIVSTDANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+ GLG+YIA +TE G Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P V+LGV++M FV NR LW L+++ R LRL Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583 >gi|113869274|ref|YP_727763.1| ABC transporter permease [Ralstonia eutropha H16] gi|113528050|emb|CAJ94395.1| ABC-type transporter, duplicated permease domains: TauT family [Ralstonia eutropha H16] Length = 583 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 276/582 (47%), Positives = 366/582 (62%), Gaps = 14/582 (2%) Query: 8 PPFISR--RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 P F S+ R PN FDL +++ +I ++ Q+ P + + LDV LP Y Sbjct: 14 PGFDSQLLRAPPNRFDLALLPIILAVIVMIAFTAQQMNAPFQPDQQLAVHLDVAYLPYYL 73 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 RT++RML+A+ SLLF+ +A LA+KSR VLVP LDI+QSIP+LGFL+ TV F+ Sbjct: 74 MRTSIRMLAALAASLLFSLAFAALASKSRTAEKVLVPALDILQSIPVLGFLSITVTGFIA 133 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L+PG + G E AAIFAIFTSQ WNM FS+YQS IP DL E + FRLS WQ+FW L V Sbjct: 134 LFPGNIAGVECAAIFAIFTSQAWNMAFSLYQSFRTIPGDLMEAAAMFRLSPWQRFWRLEV 193 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 PF+MPGL+WNMMMSMSGGWFFVVASE I V I LPGIGSYIALAI++QDL AI +A+ Sbjct: 194 PFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQDLAAIGWAI 253 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 L ML I LYDQLLFRP++ W+++FR E SW+L L R++ ++ + Sbjct: 254 LAMLAGILLYDQLLFRPLVAWADRFRFETQAQDKLPQSWLLDLLRRSAWVGAV------- 306 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L+ RTL N R + V+ VA+ + Sbjct: 307 ---LAQTAALAGRTLAWGARRGQAPAQP--DNPRRALWFGRVRDAVIVLVALAALLRVGY 361 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 ++ + + +V +V+WLG ITM RVVVLI +A+++W+P+GI IG P ++ QP AQ L Sbjct: 362 FVHSEVGWAEVGHVLWLGTITMVRVVVLIALAALVWVPIGIRIGLSPELARIAQPIAQFL 421 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AAFPAN+ FPL V + + LNP +WLS L+IFGTQWYILFNV+AGAS P + K + Sbjct: 422 AAFPANLMFPLAVMLIVRFGLNPEIWLSPLLIFGTQWYILFNVVAGASGIPTELKLATRN 481 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 F + GW W+ ++P +FP +TG +TA GG+WNASIVSE +WG + TGLG+YIAE Sbjct: 482 FGLRGWLLWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTIVATGLGSYIAE 541 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +T +G FP + LG+++M FV+ NR LW+ LY RL Sbjct: 542 TTARGDFPRIALGIVVMALFVVGFNRLLWNRLYQLAQERTRL 583 >gi|71899312|ref|ZP_00681473.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Ann-1] gi|71730938|gb|EAO33008.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Ann-1] Length = 584 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 293/576 (50%), Positives = 385/576 (66%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN++DL+A L++ + LLHG + + P + + ++LD LP+Y RTTLRM Sbjct: 19 RAQLPNVYDLVALALILLLGIALLHGAEGASAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +AM SLLFTFV ATLAAKS+R ++VP LD++QS+P+LGFLTFTV +F+ L+PG + Sbjct: 79 FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 GAE A++FA+FTSQ WNM FS YQSL +PRDL+EVSR F S W +FW L VPF+MPGL Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI Q A+ +A+ M +I Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIAHQQFGAVAWAVAAMALLI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQLLFRP++VW++KFR+E T G SWV L +T L+ L Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQLPRSWVYDLICRTRLLKR-----------LVAP 307 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQR-VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + +L + + ++R+ L + R S D W V+ VA + + Sbjct: 308 LTRLWQRVLILRWTKRNRVTVLPVSPRAGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 +D+ + T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP Q LAAFPAN Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 V FP V + NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A + + W Sbjct: 428 VLFPFAVVAIVSTGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+ GLG+YIA +TE G Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P V+LGV++M FV NR LW L+++ R LRL Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583 >gi|237810965|ref|YP_002895416.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|237503515|gb|ACQ95833.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] Length = 621 Score = 500 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 280/570 (49%), Positives = 371/570 (65%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 63 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 122 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 123 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 182 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 183 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 242 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 243 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 302 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G +PL + + Sbjct: 303 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLG-------APLGAALHRAA 355 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 R + P R + + W + A+ + ++ D+ Sbjct: 356 RARASLGVRLPTR-----GRARAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 410 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 411 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 470 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 471 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 530 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 531 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 590 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 591 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 620 Score = 93.8 bits (232), Expect = 7e-17, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 56 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 115 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 116 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 175 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 176 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 235 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 236 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 295 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 296 AIALYDQLLFRPMVAWAHK 314 >gi|152980896|ref|YP_001353349.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] gi|151280973|gb|ABR89383.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] Length = 577 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 263/572 (45%), Positives = 366/572 (63%), Gaps = 11/572 (1%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 I PN +D LV+ ++ + G + T P + ++ PI+LD +LP Y RT LRM Sbjct: 17 ISPNRWDWALLPLVLAVLVAVGFGAMQMTRPFVVGEVTPISLDPANLPYYLLRTILRMFI 76 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+ +LLF+FV+A +AAK R V++P LDI+QS+PILGF + F+ +PG ++G Sbjct: 77 ALGCALLFSFVFAAIAAKYRAAEKVMIPTLDILQSVPILGFQAIAIAPFIAFFPGSLLGV 136 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIF+SQ WNM FS+YQS+ +P +L E +R FRLSGWQ+FW L +P++MPGL+W Sbjct: 137 ECAAIFAIFSSQAWNMAFSLYQSIRTVPSELNEAARVFRLSGWQRFWRLELPYAMPGLLW 196 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSGGWFF+VA+E I V + I LPGIG+YIA+AI+ +DL AIL+A+ ML I L Sbjct: 197 NMMMSMSGGWFFLVAAEAISVANQDIKLPGIGAYIAVAIEAKDLHAILWAIGAMLAGIVL 256 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQL FRP++ W++KFR E + G SW+L R++ ++R W Sbjct: 257 YDQLFFRPLLAWADKFRFEESQGETEQRSWLLNWGRRSRWMRAGTDRMW----------A 306 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 L TLG + + S + + M W V+ A ++ ++ + + Sbjct: 307 MLRSTLGWFSVSYDGTAPR-ASARVIHPMWMRVWNVVLLLAAGLAVYRLGIFVHSEVGWA 365 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 +V +V+WLG IT+ RV++LI +AS++W+P+ +WIG RP S ++Q AQ LAAFP N+ F Sbjct: 366 EVGHVLWLGVITLTRVLLLIALASLVWVPIAVWIGLRPKYSQRVQGLAQFLAAFPVNLMF 425 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PLVV + LNPN+WLS LM+FGTQWYILFNV+AGAS PN+ + + + + GW W Sbjct: 426 PLVVYLLLTMQLNPNIWLSPLMVFGTQWYILFNVVAGASTIPNELRLASDNLGLKGWLKW 485 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 + + LP +FP YVTGAITA GG+WNASIV+E +WG L GLG+YI + T+ G F Sbjct: 486 KRVYLPAVFPSYVTGAITASGGSWNASIVAEYVTWGKTTLIADGLGSYIKQMTDAGDFHR 545 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 + LG+ +MC FV+ LNRF W LYL R Sbjct: 546 IALGIGVMCIFVMLLNRFFWRKLYLLAEDRSR 577 >gi|71274644|ref|ZP_00650932.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Dixon] gi|71899643|ref|ZP_00681797.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Ann-1] gi|170730910|ref|YP_001776343.1| putative nitrate transport system permease [Xylella fastidiosa M12] gi|71164376|gb|EAO14090.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Dixon] gi|71730595|gb|EAO32672.1| Binding-protein-dependent transport systems inner membrane component [Xylella fastidiosa Ann-1] gi|167965703|gb|ACA12713.1| putative nitrate transport system permease protein [Xylella fastidiosa M12] Length = 584 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 294/576 (51%), Positives = 384/576 (66%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R PN +DL+A L++ + LLHG + P + + ++LD LP+Y RTTLRM Sbjct: 19 RAQLPNAYDLVALALILLLGIALLHGAEGARAPLSALPVEAVSLDPTHLPEYGLRTTLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 +AM SLLFTFV ATLAAKS+R ++VP LD++QS+P+LGFLTFTV +F+ L+PG + Sbjct: 79 FAAMTASLLFTFVVATLAAKSQRAERLIVPALDVLQSVPVLGFLTFTVTFFLGLFPGSQL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 GAE A++FA+FTSQ WNM FS YQSL +PRDL+EVSR F S W +FW L VPF+MPGL Sbjct: 139 GAECASVFALFTSQAWNMAFSFYQSLRTVPRDLQEVSRGFGFSAWLRFWRLEVPFAMPGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WNMMMSMSGGWFFVVASE I VGDT + LPGIGSY+ALAI Q A+ +A+ M +I Sbjct: 199 IWNMMMSMSGGWFFVVASEAITVGDTTVTLPGIGSYLALAIANQQFGAVAWAVAAMALLI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 LYDQLLFRP++VW++KFR+E T G SWV L +T L+ L Sbjct: 259 LLYDQLLFRPIVVWADKFRVELTAGRQIPRSWVYDLICRTRLLKR-----------LVAP 307 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRV-SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + +L + + ++R+ L + RV S D W V+ VA + + Sbjct: 308 LTRLWQRVLILRWTKRNRVTVLPVSPRVGSVRGDRLWRVVLFAVAAACIYFVFNSLWQTL 367 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 +D+ + T+ RVVVLI +AS+IW+P+G+WIG RP ++ ++QP Q LAAFPAN Sbjct: 368 DVEDLTAALGGALATLLRVVVLIALASLIWVPIGVWIGLRPVLAQRVQPLVQFLAAFPAN 427 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 V FP V + NPN+WLS LM+ GTQWYILFNVIAGASAFP D KE A + + W Sbjct: 428 VLFPFAVVAIVSAGANPNIWLSPLMVLGTQWYILFNVIAGASAFPTDLKEAAQVYRLRSW 487 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LPGIFPYY+TGA+TA GG+WNASIV+E+ SWGH HL+ GLG+YIA +TE G Sbjct: 488 TWWRRVMLPGIFPYYLTGALTASGGSWNASIVAELVSWGHQHLQAYGLGSYIASATEAGD 547 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P V+LGV++M FV NR LW L+++ R LRL Sbjct: 548 YPRVLLGVVVMSLFVTVFNRTLWRRLFVFAERRLRL 583 >gi|226939379|ref|YP_002794452.1| ABC transporter nitrate permease [Laribacter hongkongensis HLHK9] gi|226714305|gb|ACO73443.1| probable ABC transporter nitrate permease [Laribacter hongkongensis HLHK9] Length = 576 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 287/573 (50%), Positives = 388/573 (67%), Gaps = 11/573 (1%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 P +D LAF L+ G++ + HG++E P I+ P++LD +LP YA TTLRML+ Sbjct: 14 FRPTPWDGLAFALIFGLLLLFGHGVREAWQPLAILQAEPVSLDPANLPAYALYTTLRMLA 73 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+ +S LFT YATLAA+S R G +++P LDI+QSIP+LG+L+FTV +F+ L+PG+++GA Sbjct: 74 ALAVSFLFTLGYATLAARSARAGKLMIPALDILQSIPVLGYLSFTVTFFLALFPGRMMGA 133 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIFTSQ WNM FS+YQSL +PRDL EV+ S RL+ WQ+FW L +P++MPGLVW Sbjct: 134 ECAAIFAIFTSQAWNMAFSLYQSLTTLPRDLVEVAASLRLTAWQRFWKLDLPYAMPGLVW 193 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSG WFFVVASE +VVG + LPGIGSY+A+AI +DL A+ + +LTML VI L Sbjct: 194 NMMMSMSGSWFFVVASEALVVGQQQVMLPGIGSYLAVAIDVRDLGAVGWVVLTMLVVIIL 253 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQ+LFRP++ WS KF L+ T G+ + SW+L L + ++ + L Sbjct: 254 YDQVLFRPLVAWSEKFNLQVTAGVAGSGSWLLTLGERARLIQTL----------LVRPAG 303 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 +L + + P Q + D W + +A+ W Y+ + Sbjct: 304 RLLSHVAQLPLG-PRLRWQAEAPASTPGWPDRLWLAGLTALALWALWSVWHYLAQAVDFH 362 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 DVL V LG +T+ RV VLI++AS++W+PVG+WIG RP ++ ++Q AQ LAAFPAN+ F Sbjct: 363 DVLAVFGLGALTLLRVAVLIVLASLVWVPVGVWIGLRPQLAGRVQAMAQFLAAFPANLLF 422 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P V + ++ L+PN+WLS L+IFGTQWYILFNV+AGA AFP +++EVAS+ I G WW Sbjct: 423 PACVVLIIHFRLDPNVWLSPLLIFGTQWYILFNVVAGAQAFPAEYREVASNLQIRGGLWW 482 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 R ++LPGIFPY++TGA+TA GGAWNASIV E SWG+ L GLG+YIAE T G P+ Sbjct: 483 RKVMLPGIFPYFLTGALTASGGAWNASIVGEYVSWGNDVLVAKGLGSYIAEHTASGQHPQ 542 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 V+LG+L+M +V+ NR LW PL R L L Sbjct: 543 VLLGILVMAVYVVLFNRLLWRPLQELAERRLSL 575 >gi|170742462|ref|YP_001771117.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168196736|gb|ACA18683.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 602 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 292/583 (50%), Positives = 388/583 (66%), Gaps = 4/583 (0%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 + + PN +D+ AF++VIG + LHG+ E P +D P+ LD LP YA RT Sbjct: 19 GRVGAMLIPNGYDVAAFLVVIGGLIATLHGVHEMRAPLAALDGEPVRLDPWLLPDYALRT 78 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 TLR+ +AM SL+FT + A LAAKSR+ +V+VP LDI+QS+P+LGFL+FTV +F+ L+P Sbjct: 79 TLRLFAAMAASLVFTVLVAPLAAKSRKAELVIVPALDILQSVPVLGFLSFTVAFFLGLFP 138 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G+ +GAE AAIFA+FT+Q WNM FS YQSL N+PRDL EV+R FRLS WQ+F L PF+ Sbjct: 139 GRQLGAECAAIFAVFTAQAWNMAFSFYQSLRNLPRDLTEVTRHFRLSPWQRFVRLEAPFA 198 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGLVWN MMSMSG WFF+VASE I VGDT I LPGIG+++ALAI +DL AI +A+ + Sbjct: 199 VPGLVWNAMMSMSGSWFFIVASEAISVGDTRITLPGIGAWLALAIDRKDLAAIAWAVAAI 258 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 VI LYDQL+FRP++ W++KFR E+T S+V L R+T LR I + Sbjct: 259 AAVILLYDQLVFRPIVAWADKFRFEQTAAQARPRSFVYDLLRRTRALRGIAALVGAAAAL 318 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLC----SNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 L + ++ L+L + ++ + D W V +A W + Sbjct: 319 LGSVIRAAAPFRRASSLLPATRKLRLAKPLLAKPLLATLADRAWLVAVVALAASALWIAA 378 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ D++ + LG +T+ RVVVLI +AS+IW+P+G+WIG RP ++ QP AQ Sbjct: 379 DFVRATLGLGDLVEAVALGALTLLRVVVLIAVASVIWVPIGVWIGLRPAVAEATQPLAQF 438 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 LAAFPAN+ FP V + +PN+WLS LM+ GTQ YILFNV+AGASAFP D +E A+ Sbjct: 439 LAAFPANILFPFAVVAIVATGADPNIWLSPLMVLGTQCYILFNVVAGASAFPTDLREAAT 498 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + + W+WWR ILPGIFPYYVTGA+TA GG+WNASIV+EVASWG L+ GLGAYIA Sbjct: 499 LYRMRSWQWWRDAILPGIFPYYVTGALTASGGSWNASIVAEVASWGDTKLKAAGLGAYIA 558 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++T+ G +P VVLGV +M FV+ NR +W PLY YG R RL Sbjct: 559 QATDAGDYPRVVLGVAVMSLFVVVFNRLVWRPLYAYGERRFRL 601 >gi|83721275|ref|YP_441179.1| ABC transporter permease [Burkholderia thailandensis E264] gi|167618011|ref|ZP_02386642.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257140157|ref|ZP_05588419.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83655100|gb|ABC39163.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 577 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 282/570 (49%), Positives = 367/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I +L G ++ +P I+L +LP Y RT LRML+A+ Sbjct: 19 GWRDAVALLLVLALIVVLGSGARQMALPLGAARPEAISLSPLALPGYTLRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YA+LAAKSR VL+P+LD++QS+PILG+L+FTVV+F+++ PG GAELA Sbjct: 79 ASFVFTFAYASLAAKSRAAEAVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGSTFGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MSMSGGWFFVVASE I VGD I LPG+G+Y+A AI E++L AI +A+ M I LYDQ Sbjct: 199 MSMSGGWFFVVASEAISVGDLRIALPGVGAYVARAIAERNLAAIGFAIAAMTIAIVLYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G +PL + + Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRVG-------APLGAMLHRAA 311 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 R + L + WF + A+ + ++ DV Sbjct: 312 RARLSLGVRLSARERSLSR-----RAGRVVWFSLCAAGALYAGAALLRIAAPALSWSDVA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI IA+ +W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGIATAVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR I Sbjct: 427 VFAIVRFRLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREI 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WG L +GLGAY+A +T G +P + L Sbjct: 487 VLPGILPYYVTGAITASGGAWNASIVSELVGWGPTTLDASGLGAYVARTTAAGDYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVAAMSLLVIAMNRLMWRPLYAFAERRSRL 576 >gi|167579935|ref|ZP_02372809.1| ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 577 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 282/570 (49%), Positives = 368/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I +L G ++ +P I+L +LP Y RT LRML+A+ Sbjct: 19 GWRDAVALLLVLALIVVLGSGARQMALPLGAARPEAISLSPLALPGYTLRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YA+LAAKSR VL+P+LD++QS+PILG+L+FTVV+F+++ PG GAELA Sbjct: 79 ASFVFTFAYASLAAKSRAAEAVLIPLLDVLQSVPILGYLSFTVVFFLSIAPGSTFGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MSMSGGWFFVVASE I VGD I LPG+G+Y+A AI E++L AI +A+ M I LYDQ Sbjct: 199 MSMSGGWFFVVASEAISVGDLRIALPGVGAYVARAIAERNLAAIGFAIAAMTIAIVLYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G +PL + + Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRVG-------APLGAMLHRAA 311 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 R + + + WF + A+ + ++ DV Sbjct: 312 RARLSLGVRLSARERSMSR-----RAGRVVWFSLCAAGALYAGAALLRIAAPALSWSDVA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI IA+ +W+PVG+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGIATAVWVPVGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR I Sbjct: 427 VFAIVRFGLAPAIWLSALMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREI 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WG L +GLGAY+A +T G +P + L Sbjct: 487 VLPGILPYYVTGAITASGGAWNASIVSELVGWGPTTLDASGLGAYVARTTAAGDYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVAAMSLLVIAMNRLMWRPLYAFAERRSRL 576 >gi|194290861|ref|YP_002006768.1| binding-protein-dependent transporter inner membrane component [Cupriavidus taiwanensis LMG 19424] gi|193224696|emb|CAQ70707.1| putative Binding-protein-dependent transporter, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 584 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 271/582 (46%), Positives = 365/582 (62%), Gaps = 13/582 (2%) Query: 8 PPFISR--RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 P F S+ R PN FDL +++ +I ++ Q+ VP + + LDV LP Y Sbjct: 14 PGFDSQLLRAPPNRFDLALLPIILAVIVMIAFAAQQMNVPFRPDQPLAVHLDVAYLPYYL 73 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 RT++RML+A+ SLLF+ +A LA+KSR VLVP LDI+QSIP+LGFL+ TV F+ Sbjct: 74 MRTSVRMLAALAASLLFSLAFAALASKSRSAEKVLVPALDILQSIPVLGFLSITVTGFIA 133 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L+PG + G E AAIFAIFTSQ WNM FS+YQS IP DL E + FRLS WQ+FW L V Sbjct: 134 LFPGNLAGVECAAIFAIFTSQAWNMAFSLYQSFRTIPGDLLEAAAMFRLSPWQRFWRLEV 193 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P++MPGL+WNMMMSMSGGWFFVVASE I V I LPGIGSYIALAI++QDL AI +A+ Sbjct: 194 PYAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQDLAAIGWAI 253 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 + ML I LYDQLLFRP++ W+++FR E SW+L L R++ + Sbjct: 254 VAMLAGILLYDQLLFRPLVAWADRFRFETLAQDKLPQSWLLDLLRRS-----------AW 302 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L L + R + L + VA+ + Sbjct: 303 AGALLAQAAALGSRTLAWGARGRAPAPARPIDPRRARWLGRARDTAIVLVALAALLRVGY 362 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 ++ + + +V++V+WLG +TM RV+VLI +A+++W+P+GI IG P ++ QP AQ L Sbjct: 363 FVHSEVGWSEVVHVLWLGTLTMVRVIVLIALAALVWVPIGIRIGLNPDLARIAQPVAQFL 422 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 AAFPAN+ FPL V ++ + LNP +WLS L+IFGTQWYILFNVIAGAS P + + A + Sbjct: 423 AAFPANLMFPLAVMLIARFGLNPEIWLSPLLIFGTQWYILFNVIAGASGIPTELRLAARN 482 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 F + GW W+ ++P +FP +TG +TA GG+WNASIVSE +WG + TGLG+YIAE Sbjct: 483 FGLRGWLLWKRFLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTIVATGLGSYIAE 542 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +T +G FP + LG+++M FV+ NR LW+ LY RL Sbjct: 543 TTARGDFPRIALGIVVMALFVVGFNRLLWNRLYQLAQERTRL 584 >gi|83310424|ref|YP_420688.1| ABC-type anion transport system [Magnetospirillum magneticum AMB-1] gi|82945265|dbj|BAE50129.1| ABC-type anion transport system [Magnetospirillum magneticum AMB-1] Length = 579 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 274/577 (47%), Positives = 375/577 (64%), Gaps = 8/577 (1%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 ++ + PN +DL ++ ++ +L +G + T P D+ + + ++LD LP Y R+ L Sbjct: 10 VAPELKPNFWDLAIIPIIFALLALLAYGGAQMTTPYDVGEKLALSLDPAGLPYYLLRSAL 69 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM +A++ SL+FT +YA+LAAK L VL+PILDI+QSIPILGFL+ TV F+ L+PG Sbjct: 70 RMAAALLASLIFTLIYASLAAKVPALEKVLIPILDILQSIPILGFLSITVTGFIALFPGN 129 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIFAIFTSQ WNMTFS+Y SL +P DL E S F LS WQ+FW L +P++MP Sbjct: 130 LLGVECAAIFAIFTSQAWNMTFSLYSSLKTVPNDLIEASEMFHLSPWQRFWRLELPWAMP 189 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 GLVWNMMMS+SGGWFFVVASE I V I LPG+GSYIALAI E++L AI +AML +L Sbjct: 190 GLVWNMMMSVSGGWFFVVASEAISVSGQSIALPGVGSYIALAIAEENLAAIGWAMLAVLA 249 Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310 I +YDQL+FRP++ W++KF+++ G +SW+L L ++ R++ + + Sbjct: 250 GIMIYDQLMFRPLVAWADKFKVDSAPGEQQPESWLLTLMQRGRLFRYLARLPSAAWDRFT 309 Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 +++ R + H P + L S + W ++ A+G + +I Sbjct: 310 FLLRQ--REETTLFHHAPIRMVTLPS------WAERVWDGLLILAALGALVEVGLFIHGA 361 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 +V V+ G T RVVVLI +AS+IW+PVG+WIG RP ++ +Q AQ LAAFPA Sbjct: 362 IGLWEVWQVLLYGLTTALRVVVLISLASLIWVPVGVWIGQRPLVAQNVQWVAQFLAAFPA 421 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FP+ V + ++ N ++W S LMI GTQWYILFNVIAGASA P D K+ A + ++G Sbjct: 422 NLMFPVAVVLIVHFDANVDVWTSPLMILGTQWYILFNVIAGASAIPQDMKDAAGNLGLSG 481 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W W+ ILP IFP YVTGA+TA GG+WNASIVSE+ SWG L GLG+YIA +T G Sbjct: 482 WLRWKKFILPAIFPSYVTGAVTASGGSWNASIVSELVSWGDTKLEAVGLGSYIARATADG 541 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP + LG+ +MC FV+ NRFLW LY+ LRL Sbjct: 542 DFPRIALGIAVMCLFVMGFNRFLWRRLYMLAADRLRL 578 >gi|254187628|ref|ZP_04894140.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|157935308|gb|EDO90978.1| ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] Length = 621 Score = 497 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 63 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 122 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 123 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 182 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 183 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 242 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 243 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 302 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 303 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 362 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 363 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 410 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 411 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 470 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 471 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 530 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 531 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 590 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 591 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 620 Score = 94.2 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 56 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 115 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 116 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 175 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 176 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 235 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 236 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 295 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 296 AIALYDQLLFRPMVAWAHK 314 >gi|94312116|ref|YP_585326.1| binding-protein-dependent transport systems inner membrane component [Cupriavidus metallidurans CH34] gi|93355968|gb|ABF10057.1| ABC-type transporter, permease component [Cupriavidus metallidurans CH34] Length = 581 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 266/571 (46%), Positives = 366/571 (64%), Gaps = 11/571 (1%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN FD +++ +I I+ ++ VP D + + LDV SLP Y RT++RML+A+ Sbjct: 22 PNRFDFALLPIILAVIVIVAFAAKQMVVPYQPGDALSVQLDVASLPYYLMRTSIRMLAAL 81 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 SLLF+F +A +A+++R V+VP LDI+QSIP+LGFL+ TV F+ L+PG ++G E Sbjct: 82 AASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVEC 141 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNM FS+YQS IP DL E + FRLS WQ+FW L VP++MPGL+WNM Sbjct: 142 AAIFAIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPYAMPGLLWNM 201 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I V I LPGIGSYIALAI++Q+L AI +A++ ML I +YD Sbjct: 202 MMSMSGGWFFVVASEAISVSGHDIRLPGIGSYIALAIQQQNLPAIGWAIVAMLVGILIYD 261 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 Q LFRP++ W+++FR E SW+L L R++ ++ + L Sbjct: 262 QFLFRPLVAWADRFRFETLAQDTMPQSWLLDLLRRSAWVHAL----------LKWTASLG 311 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 RTL + + R S L+ V+ +A+ ++ + ++ + + + Sbjct: 312 GRTLAWS-ARHRNMVVLPAAPARWSPWLERLRDTVIIVIALAALYRVVHFVHSEVGWGEA 370 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +V+WLG +TM RV+VLI +A++IW+P+GI IG P ++ QP AQ +AAFPAN+ FPL Sbjct: 371 AHVLWLGVLTMTRVIVLIALAALIWVPIGIRIGLNPSVARIAQPIAQFMAAFPANLMFPL 430 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + + LNP +WLS LMIFGTQWYILFNV+AGAS P + + A +F + GW WR Sbjct: 431 AVMAIVRFGLNPEIWLSPLMIFGTQWYILFNVVAGASGIPTELRLAARNFGLKGWLMWRR 490 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++P +FP +TG +TA GG+WNASIVSE +WG L TGLG+YIAE T +G FP + Sbjct: 491 FLIPAVFPSLLTGLVTAAGGSWNASIVSEYVTWGDRTLVATGLGSYIAEMTARGDFPRIA 550 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LG+ +M FV+ NR LW+ LY RL Sbjct: 551 LGIGVMALFVVGFNRLLWNRLYDLAQLRTRL 581 >gi|160872910|ref|ZP_02063042.1| ABC transporter, permease protein [Rickettsiella grylli] gi|159121709|gb|EDP47047.1| ABC transporter, permease protein [Rickettsiella grylli] Length = 577 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 260/585 (44%), Positives = 373/585 (63%), Gaps = 12/585 (2%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62 +YN S +I PN +D +A ++V+G++ + ++ T P + +TLD LP Sbjct: 4 IYNRFSFRSSFKILPNAWDFVALIMVLGMLAAFVWAGKQITSPYHVGQPFALTLDPLQLP 63 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 +YA T LR+ +AM SLLFTF TLAAK++R +++P +DI+QS+P++G L+ T+V Sbjct: 64 KYALFTVLRLFTAMAFSLLFTFTVGTLAAKNKRAARIIIPCIDILQSVPVIGLLSITIVG 123 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F+ L+ G +G E AAIFA+FT+QVWN+T S YQSL ++P +L+E + F LS WQ+FW Sbjct: 124 FITLFQGSRLGPEAAAIFAVFTAQVWNITLSFYQSLRSVPTELKEAADIFHLSSWQRFWR 183 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 L VPFSMPGL+WN+MMSMS W F++ASE I V + I LPGIGSY+ LAI + ++ Sbjct: 184 LDVPFSMPGLLWNIMMSMSASWIFLIASESISVNNQTIILPGIGSYLGLAINRASISGVI 243 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302 Y +LTM VI LYDQLLFRP++ WS KF E+ + Y + SW+ L ++T L+++G Sbjct: 244 YTILTMFVVILLYDQLLFRPLLNWSKKFTFEQVSQEYVSRSWLTSLLQQTYILKYLGRFF 303 Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362 + N F + +D W+ + W Sbjct: 304 GKLGDTIVNI------------SFFKTKKEVSAKKSGSNKFIDFIWYSMTFVFVSLSLWL 351 Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I+ + + ++++V +LGCIT R++ +I+IASIIWIP+G++IG I+ IQP A Sbjct: 352 LLQFILKNLSLHELIHVFFLGCITALRIISIILIASIIWIPIGVFIGLNRRIAEWIQPIA 411 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q AAFPANV FP+VV + YHLN +W + L++ GTQWYILFNVIAG +A P D KEV Sbjct: 412 QFFAAFPANVLFPIVVILILKYHLNFEIWSTPLLLLGTQWYILFNVIAGTAALPEDLKEV 471 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 +S+F + GW+WWR +ILPGIFP+++TG ITA GG WN +I++E+ +WG I L +TGLGAY Sbjct: 472 SSNFGVKGWQWWRRLILPGIFPHWITGTITAIGGGWNLTILTEIINWGSITLVSTGLGAY 531 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 IA+S + G FP + LG+ +M FVL +N +W PLY RL Sbjct: 532 IAKSADAGDFPRIALGMAMMSLFVLVMNHLVWRPLYNLSQSRYRL 576 >gi|254196922|ref|ZP_04903346.1| ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|169653665|gb|EDS86358.1| ABC transporter, permease protein [Burkholderia pseudomallei S13] Length = 621 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 63 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 122 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 123 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 182 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 183 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 242 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 243 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 302 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 303 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 362 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 363 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 410 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 411 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 470 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 471 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 530 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 531 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 590 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 591 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 620 Score = 94.2 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 56 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 115 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 116 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 175 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 176 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 235 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 236 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 295 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 296 AIALYDQLLFRPMVAWAHK 314 >gi|182678590|ref|YP_001832736.1| binding-protein-dependent transport systems inner membrane component [Beijerinckia indica subsp. indica ATCC 9039] gi|182634473|gb|ACB95247.1| binding-protein-dependent transport systems inner membrane component [Beijerinckia indica subsp. indica ATCC 9039] Length = 578 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 288/587 (49%), Positives = 391/587 (66%), Gaps = 10/587 (1%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 M + F+ R+ PN +D AF+L++ + +G T+P + I+LD + Sbjct: 1 MLARFVSLAFLDRKSLPNPYDFAAFILLLAAFVAVAYGSSGLTLPLSAPEATHISLDYGA 60 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 LP YA RTTLRM +A+ SL+FTF YATLAAKS+R +VL+P+LDI+QS+PILGFL+FTV Sbjct: 61 LPYYALRTTLRMFAAIAASLVFTFTYATLAAKSQRAALVLIPLLDILQSVPILGFLSFTV 120 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +F++L+PG +G E AA+FAIFTSQ WNM FS YQSL ++PRDL EV+ F LS WQKF Sbjct: 121 TFFLHLFPGSTLGVECAAVFAIFTSQAWNMAFSFYQSLRSLPRDLVEVANGFHLSPWQKF 180 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 W L P++MP L+WN MMSMSGGWFFVVASE I VGDT + LPGIGSY+A AI+ + + A Sbjct: 181 WQLETPYAMPALIWNTMMSMSGGWFFVVASEAISVGDTTVKLPGIGSYLAQAIEMRRIDA 240 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 ++ A+ M VI LYDQLLFRP++V++ KFR+E + SWV LF +T +LR + Sbjct: 241 VIAAVAAMAIVILLYDQLLFRPLVVFAGKFRVELSASQTKESSWVADLFNRTRWLRALMS 300 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 S ++ +L + S +LD+ W ++ +++ Sbjct: 301 MPVQTLSSIALWRLELP----------FWRAQAIDKQAHSSRVLDLLWITLIAFLSLWAL 350 Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 I ++ T+ D+ + L TM RVV+L+ +A+++W+P+G++IG RP ++ KIQP Sbjct: 351 RFVIVFVGQTLTFADIQESLILTFFTMLRVVLLMALATLVWVPIGVFIGLRPALAEKIQP 410 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 AQ LAAFPANV FP+VV + + LNP++WLS L+IFGTQWYILFNVIAG AFPND K Sbjct: 411 LAQFLAAFPANVVFPIVVVVIVRFGLNPDIWLSFLIIFGTQWYILFNVIAGTMAFPNDLK 470 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 E ASSF I GW WW +ILPGIFP+YVTGA+TA GG+WNA+IV+E WG + + G+G Sbjct: 471 EAASSFGIKGWNWWTSVILPGIFPFYVTGALTASGGSWNAAIVAESVKWGDVSIEAHGIG 530 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 AYIA++T KG +P +VLGV +M V+ NR +W PL+ R LRL Sbjct: 531 AYIADATAKGDYPRIVLGVTVMSIVVILFNRLVWRPLFGLAERRLRL 577 >gi|23013971|ref|ZP_00053815.1| COG4986: ABC-type anion transport system, duplicated permease component [Magnetospirillum magnetotacticum MS-1] Length = 582 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 272/577 (47%), Positives = 371/577 (64%), Gaps = 8/577 (1%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 ++ + PN +DL ++ ++ +L +G + T P D+ + + ++LD LP Y R+ L Sbjct: 13 VAPELKPNFWDLAIIPMIFALLALLAYGGAQMTTPYDVGEKLALSLDPAGLPYYLLRSAL 72 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 RM +A++ SL FT VYATLAAK L VL+P+LDI+QSIPILGFL+ TV F+ L+PG Sbjct: 73 RMAAALLASLAFTLVYATLAAKVPALEKVLIPVLDILQSIPILGFLSITVTGFIALFPGN 132 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 ++G E AAIFAIFTSQ WNMTFS+Y SL DL E S F LS WQ+FW L +P++MP Sbjct: 133 LLGVECAAIFAIFTSQAWNMTFSLYSSLKTERYDLIEASEMFHLSPWQRFWRLELPWAMP 192 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 GLVWNMMMS+SGGWFFVVASE I V I LPG+GSYIALAI E++L AI +A+L +L Sbjct: 193 GLVWNMMMSVSGGWFFVVASEAISVSGQSIALPGVGSYIALAIAEENLAAIGWAVLAVLA 252 Query: 251 VIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLS 310 I +YDQL+FRP++ W++KF+++ G +SW+L L ++ R + + + Sbjct: 253 GIMIYDQLMFRPLVAWADKFKVDSLPGEQQPESWLLTLMQRGRMFRTLARLPSAMWDRFT 312 Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 +++ R + P + + L ++ W ++ A+G + +I Sbjct: 313 FLLRRKDR--AQLFHQAPIHMVTLP------RWVERTWDGLLICGAVGALVEVALFIHGS 364 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 +V V+ G T FRVVVLI +AS+IW+PVG+WIG RP ++ +Q AQ LAAFPA Sbjct: 365 IGLWEVGQVLLYGFATAFRVVVLISLASLIWVPVGVWIGQRPLVAQNVQWVAQFLAAFPA 424 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FP+ V + + N ++W S LMI GTQWYILFNVIAGASA P D K+ A + ++G Sbjct: 425 NLMFPVAVVLIVRFDANVDVWTSPLMILGTQWYILFNVIAGASAIPQDMKDAAGNLGLSG 484 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W W+ ILP IFP YVTGA+TA GG+WNASIVSE+ SWG L GLG+YIA +T G Sbjct: 485 WLRWKKFILPAIFPSYVTGAVTASGGSWNASIVSELVSWGDTKLEAVGLGSYIARATADG 544 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 FP + LG+ +MC FV+ NRFLW LY+ LRL Sbjct: 545 DFPRIALGIAVMCLFVMGFNRFLWRRLYMLAADRLRL 581 >gi|298506983|gb|ADI85706.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 578 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 281/574 (48%), Positives = 373/574 (64%), Gaps = 13/574 (2%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLS 74 PN++D+ AF+LV+G++ +L G +E IVP ++LD LP YA RT +RM + Sbjct: 15 LPNLWDVAAFLLVLGVVALLAWGSREMAATFVPGKIVPSLSLDPRHLPYYALRTVIRMGA 74 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+ +SL FT Y TLAAKSRRL +LVP LDI+QS+PILGFL+ TV F+ L+PG ++G Sbjct: 75 ALCLSLAFTLTYGTLAAKSRRLSPILVPTLDILQSVPILGFLSVTVTGFIALFPGSLMGV 134 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A+IFAIFTSQ WNM FS YQSL IPRDL E + F LSGWQ+FW + PF++P LVW Sbjct: 135 EAASIFAIFTSQAWNMAFSFYQSLKTIPRDLGEAATLFGLSGWQRFWRVEAPFAVPPLVW 194 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 N+MMS+SGGWFFVVASE I VG T + LPGIGSY+ALAI QD+ AI +A+ TML VI L Sbjct: 195 NIMMSVSGGWFFVVASEAITVGKTAVTLPGIGSYVALAIHRQDMGAIAWALATMLAVILL 254 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL-RFIGYSSWNFFSPLSNNV 313 YDQL FRP++ W+ KFR+E + +SW L LF +T FL R + + Sbjct: 255 YDQLFFRPLVAWAEKFRVELSQARIAPESWCLTLFARTRFLARALSLAGALPELLTERLP 314 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ G R + + ++D W A+ W+ ++ + + Sbjct: 315 RRRRPRTGEHRHR----------GRPAARIMDRIWNAAFAVAALWALWKLARFV-SVIPF 363 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++L V LG TM RV VL+I+AS+ W+P+G+ IG P ++++QP AQ LAAFPAN+ Sbjct: 364 GEILSVFGLGLATMARVAVLLIMASLFWVPIGVTIGLNPRWTTRVQPVAQFLAAFPANLL 423 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V + + LNP +W + LMI GTQWYILFNVIAGASA PND +E A++ ++GW Sbjct: 424 FPAAVVLIVRFRLNPEIWTAPLMILGTQWYILFNVIAGASAIPNDLREAAANLGLSGWEL 483 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR ++LPGIFP +TG +TA GG WNASIV+EV SWG L TGLG+ IA TE+G +P Sbjct: 484 WRRLLLPGIFPSLITGLVTASGGTWNASIVAEVVSWGPTTLTATGLGSAIARWTEQGDYP 543 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +VLG+ +M +V+ LNRF W LYL RL Sbjct: 544 HIVLGIAVMSMYVVCLNRFFWRRLYLLAQTRYRL 577 >gi|189348224|ref|YP_001941420.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] gi|189338362|dbj|BAG47430.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 577 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 265/571 (46%), Positives = 362/571 (63%), Gaps = 12/571 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P DL A ++V+G + + ++ P + I+L +LP Y RT RM +A+ Sbjct: 18 PGWRDLAAMLIVVGFLLLAGISARQMAGPLAVAHPPAISLSPAALPGYTLRTVARMFAAL 77 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + S++FTFVYAT AA+SRR VL+P+LD++QS+PILG+L+FTV++F++L+PG+++GAE Sbjct: 78 LASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSLFPGRILGAEC 137 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNMTFS YQ+L +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN Sbjct: 138 AAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVPFAMPGLVWNA 197 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VG+ + LPG+G+Y+A AI +DL A+ +A++ M I LYD Sbjct: 198 MMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVLYD 257 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ WS +FR + SW+L LF ++ ++ + + Sbjct: 258 QLLFRPLVAWSERFRYGDAAPTVASRSWMLDLFHRSRWMGRASGPVRALLRRAARARPRG 317 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + R P D+ WF + A++ T+ D+ Sbjct: 318 FMSAWRDRIVLPPR------------TGDVLWFALCGAGCAYAAYELFRLGRATLTWTDL 365 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V G +T RV VL+ +AS+IW+P+GI IG RP ++++IQP Q LAAFP N+ FP+ Sbjct: 366 RVVASEGGLTFVRVTVLVTLASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPTNLLFPV 425 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + L P++WL LMI G QWY+LFNVIAGASAFP D +E A+ F + WWR+ Sbjct: 426 AVFAIVRLRLEPDIWLCPLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPATWWRH 485 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LPG+ PY+VTGAI A GGAWNASIV+E SWG L GLGAYIA T+ G +P + Sbjct: 486 VMLPGVLPYFVTGAIAASGGAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIA 545 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV +M V+A NR +W P+Y + R RL Sbjct: 546 LGVAVMSLLVIATNRLVWRPMYAFAERRTRL 576 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 91/263 (34%), Gaps = 4/263 (1%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 L + + ++ ML + F ++ G++ + + Sbjct: 8 LRGGRWTLPVPGWRDLAAMLIVVGFLLLAGISARQMAGPLAVAHPPAISLSPAALPGYTL 67 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 T+ R+ ++ + + + P +L + P + V Sbjct: 68 RTVARMFAALLASIVFTFVYATAAARSRRAERVLIPLLDVLQSVPILGYLSFTVLFFLSL 127 Query: 445 H----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L + W + F+ P D E + SF ++ W+ + + +P Sbjct: 128 FPGRILGAECAAIFAIFTSQAWNMTFSFYQALRTVPPDLDEASRSFRLSAWQRFWRLDVP 187 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P V A+ + G W + SE + G++H+ G+GAY+A++ V ++ Sbjct: 188 FAMPGLVWNAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIV 247 Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583 M ++ ++ L+ PL + R Sbjct: 248 AMSVAIVLYDQLLFRPLVAWSER 270 >gi|134094843|ref|YP_001099918.1| putative transmembrane ABC transporter protein [Herminiimonas arsenicoxydans] gi|133738746|emb|CAL61793.1| putative ABC-type transport system, permease component [Herminiimonas arsenicoxydans] Length = 577 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 259/570 (45%), Positives = 362/570 (63%), Gaps = 11/570 (1%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 I PN +D LV+ ++ + G + + P + + PI+LD LP Y RT LRM Sbjct: 17 ISPNRWDWALLPLVLIVLLAVAFGAAQMSRPFMVGEATPISLDPAYLPYYLLRTILRMFM 76 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+ SLLF+FV+A +AAK R +++P+LDI+QS+PILGF + F+ +PG ++G Sbjct: 77 ALGFSLLFSFVFAAIAAKYRAAEKIMIPMLDILQSVPILGFQAIAIAPFIAFFPGNLLGV 136 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E AAIFAIFTSQ WNM FS+YQS+ +P +L E +R FRLSGWQ+FW + +P++MPGL+W Sbjct: 137 ECAAIFAIFTSQAWNMAFSLYQSIRTVPSELNEAARVFRLSGWQRFWRMELPYAMPGLLW 196 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 NMMMSMSGGWFF+VA+E I V I LPGIG+YIA+AI+ +DL AIL+A+ ML I L Sbjct: 197 NMMMSMSGGWFFLVAAEAISVAGQDIKLPGIGAYIAVAIEARDLHAILWAIGAMLAGIVL 256 Query: 255 YDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVK 314 YDQL FRP++ W++KFR E + G SW+L R++ ++R W+ Sbjct: 257 YDQLFFRPLLAWADKFRFEESQGDTAQRSWLLDWGRRSRWMRAFSARVWSL--------- 307 Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 L RTLG Q S + + W +V ++ ++ +I + Sbjct: 308 -LRRTLGWFSLRHDGTSPQ-TSARTIHPWWPRIWDGLVLFASLLAVFRLALFIHSDIGLT 365 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L+V+ LG IT+ RV++LI +AS+IW+P+ +WIG RP S +Q AQ LAAFP N+ F Sbjct: 366 EILHVVKLGFITLLRVLLLIGLASLIWVPIAVWIGLRPKYSQCVQGAAQFLAAFPVNLMF 425 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PLVV + LNP++WLS LM+FGTQWYILFNV+AGA+ PN+ + + + + GW W Sbjct: 426 PLVVYLLVSMQLNPDIWLSPLMVFGTQWYILFNVVAGAATIPNELRLASDNLGLKGWLKW 485 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 + + LP +FP Y+TGAITA GG+WNASIV+E +WG L GLG+YI + T+ G F Sbjct: 486 KRVYLPAVFPSYITGAITASGGSWNASIVAEYVTWGKTTLIADGLGSYIKQMTDIGDFHR 545 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584 + LG+ +MC FV+ LNRF W LYL Sbjct: 546 IGLGIGVMCIFVMLLNRFFWRKLYLLAEDR 575 >gi|326387996|ref|ZP_08209600.1| binding-protein-dependent transport systems inner membrane component [Novosphingobium nitrogenifigens DSM 19370] gi|326207497|gb|EGD58310.1| binding-protein-dependent transport systems inner membrane component [Novosphingobium nitrogenifigens DSM 19370] Length = 581 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 287/575 (49%), Positives = 363/575 (63%), Gaps = 13/575 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R P+ D +AFV++ G+ I + T P + + P+TLD LP YA RT LRM Sbjct: 19 RLTRPSREDAIAFVILGGLAAIFFRTAEATVAPLSTLQLEPLTLDPSYLPYYALRTVLRM 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ S +FT V ATLAA+SR LG ++VP LDI+QS+PILGFLTFTV +FM L+PG V+ Sbjct: 79 FVALFASTVFTLVVATLAARSRHLGQLIVPALDILQSVPILGFLTFTVTFFMGLFPGSVL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAI TSQ WNM FS YQSL IP DLEE + +RLS ++F L +PF+ P L Sbjct: 139 GVECASIFAILTSQAWNMAFSFYQSLRAIPSDLEEATVIYRLSPIRRFLKLDLPFATPAL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 VWN MMSMSGGWFFVVASE I VG T + LPGIGS++ALAI +D LA+ A+ M VI Sbjct: 199 VWNAMMSMSGGWFFVVASEAITVGKTTVTLPGIGSWLALAIGRRDFLAVGEAVAAMALVI 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 YDQL FRP++ W+++FR E T SWV L R+T L + L Sbjct: 259 VAYDQLFFRPIVAWADRFRFEMTASAERPRSWVFDLLRRTRLLPVVLAPLGAIGRLLLAF 318 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 ++ R + R +L+ W +V A YI+ Sbjct: 319 EPRVGRR-------------KAIGPARSYPLLEKVWQALVIVAATAALVLLSRYIMRSLM 365 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + DVL + L +TM RV+VLI +AS++W+PVG+WIG RP + ++QP AQ LAAFPANV Sbjct: 366 WGDVLTAVLLAGLTMIRVMVLIALASLVWVPVGVWIGLRPVWAERLQPLAQFLAAFPANV 425 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V + + L P++WLS LMI GTQWYILFNVIAGASA P D +E A F + GW+ Sbjct: 426 LFPFAVMAIVRFDLAPDVWLSPLMILGTQWYILFNVIAGASAIPTDLREAAWMFRVRGWQ 485 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WWR + LPGIFPYYVTGA+TA GG+WNASIV+E WG+ HL GLG++IAE+T G + Sbjct: 486 WWRQVALPGIFPYYVTGALTASGGSWNASIVAEAVDWGNRHLVARGLGSFIAEATTAGDY 545 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P V LG+ +M FVL NR LW PLY Y R LRL Sbjct: 546 PRVALGIGVMSLFVLGFNRLLWRPLYAYADRRLRL 580 >gi|291456097|ref|ZP_06595487.1| ABC transporter, permease protein, NitT/TauT family [Bifidobacterium breve DSM 20213] gi|291382506|gb|EFE90024.1| ABC transporter, permease protein, NitT/TauT family [Bifidobacterium breve DSM 20213] Length = 596 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 246/574 (42%), Positives = 350/574 (60%), Gaps = 11/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 RI + + + + G+I +L I E P+ + ++ ++ LP YA R+ RM Sbjct: 33 RIAADALVIAGILALFGLIAWILPAIGEPIGPKGVPS--SVSTNLADLPYYALRSVFRMF 90 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTFVY T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 91 VALFFSLVFTFVYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + PR+L+E +RS RL+ WQ+FW L VP +M L+ Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPRELDEAARSLRLTRWQRFWTLDVPNAMIPLL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++TM+ V+ Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAEENLAAICWAIVTMVAVVL 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + F P+ Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSAVLTIIRQSHIDEMLD----RLFQPVGELF 326 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG +P + + S +LD+ + VV + + + I + Sbjct: 327 DTLTRPLGRTGGRWP-----VETKSTRSRVLDVLFMVVVVTASAFGVIELMLVIHRDAGF 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ + + LG +T RV +L I+ S+IW+PVG IG P +S +QP Q+LA+FP+N Sbjct: 382 DELGHALALGMLTFLRVALLTIVCSVIWVPVGALIGMNPRVSRFMQPIVQVLASFPSNFT 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V +N N LLM GTQWYILFNVIAGAS P+D +E+A SF + W+ Sbjct: 442 FPFVTLWFVACSVNINWGSILLMALGTQWYILFNVIAGASQIPDDLREMAHSFQLGRWQR 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G Sbjct: 502 WRELILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGQHTLTASGLGAYIAEATENGDTV 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++GV +M FV+A+NR W+PL R L Sbjct: 562 RTIIGVAVMSVFVVAVNRLFWNPLQRLAERRFAL 595 >gi|254181699|ref|ZP_04888296.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|184212237|gb|EDU09280.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 577 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 275/570 (48%), Positives = 365/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D ++ +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAISALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E S S R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASCSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 91.5 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAISALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASCSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|172065456|ref|YP_001816168.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gi|171997698|gb|ACB68615.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 577 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 270/571 (47%), Positives = 373/571 (65%), Gaps = 12/571 (2%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P DL+A ++V+G + + + P + I+L +LP Y RT RM +A+ Sbjct: 18 PGWRDLVATLIVVGFLLLAGIWAHQMAGPLTVAHPPAISLSPAALPGYTLRTVARMFAAL 77 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + S+ FTFV+AT AA+SRR +L+P+LD +QS+PILG+L+FTV+ F++L+PG+++GAE Sbjct: 78 LASIAFTFVFATAAARSRRAERMLIPLLDALQSVPILGYLSFTVLVFLSLFPGRILGAEC 137 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFAIFTSQ WNMTFS YQ+L +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN Sbjct: 138 AAIFAIFTSQAWNMTFSFYQALRTVPLDLDETSRSFRLSAWQRFWRLDVPFAMPGLVWNA 197 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VG+ + LPG+G+Y+A AI +DL A+ +A++ M+ I LYD Sbjct: 198 MMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMIVAIVLYD 257 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ WS +FR + SW+L LF+++ ++ P+ + + Sbjct: 258 QLLFRPLVSWSERFRYGDAAPAIASRSWMLDLFQRSRWV-------ARASGPVRALLHRA 310 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R +R P ++ + D+ WF + A++ T+ D+ Sbjct: 311 AR--ARLRGFTPAWRGRIALPRHTG---DVLWFAMCGAGCAYAAYELFRLGRTTLTWTDL 365 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V G +T RV VL+++AS++W+P+GI IG RP ++++IQP Q LAAFPAN+ FP+ Sbjct: 366 RVVAAAGALTFARVTVLVMLASVLWVPIGISIGLRPDVAARIQPVTQFLAAFPANLLFPV 425 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + L P++WL LLMI G QWY+LFNVIAGASAFP D +E A+ F + WWR Sbjct: 426 AVFAIVRLRLAPDIWLCLLMILGAQWYVLFNVIAGASAFPADLREAAACFRVRPVTWWRR 485 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LPG+ PY+VTGAITA GGAWNASIV+E SWG+ L GLGAYIA T+ G +P + Sbjct: 486 VMLPGVLPYFVTGAITASGGAWNASIVAEAVSWGNTRLNAGGLGAYIARMTDAGDYPRIA 545 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV +M FV+A NRF+W PLY + R RL Sbjct: 546 LGVAVMSLFVIATNRFVWRPLYAFAERRTRL 576 Score = 99.2 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 85/263 (32%), Gaps = 4/263 (1%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 L + + L + F ++ G+ + + Sbjct: 8 LRGGRWTLPAPGWRDLVATLIVVGFLLLAGIWAHQMAGPLTVAHPPAISLSPAALPGYTL 67 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 T+ R+ ++ + + P L + P + V Sbjct: 68 RTVARMFAALLASIAFTFVFATAAARSRRAERMLIPLLDALQSVPILGYLSFTVLVFLSL 127 Query: 445 H----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L + W + F+ P D E + SF ++ W+ + + +P Sbjct: 128 FPGRILGAECAAIFAIFTSQAWNMTFSFYQALRTVPLDLDETSRSFRLSAWQRFWRLDVP 187 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P V A+ + G W + SE + G++H+ G+GAY+A++ V ++ Sbjct: 188 FAMPGLVWNAMMSMSGGWFFVVASEAIAVGNLHVDLPGVGAYVAQAIANRDLAAVGWAIV 247 Query: 561 IMCCFVLALNRFLWHPLYLYGTR 583 M ++ ++ L+ PL + R Sbjct: 248 AMIVAIVLYDQLLFRPLVSWSER 270 >gi|300309875|ref|YP_003773967.1| anion ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072660|gb|ADJ62059.1| ABC-type anion transport system, duplicated permease component protein [Herbaspirillum seropedicae SmR1] Length = 581 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 234/570 (41%), Positives = 339/570 (59%), Gaps = 8/570 (1%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D L ++ G++ LH + V D D + + +P YA RT LRM A Sbjct: 19 GWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAFA 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 SL F LAAKSRR +++P LDI+QS+P+LGFL+ TV FM L+PG ++G E A Sbjct: 79 FSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVECA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFT QVWNM F Y S+ IP D++E + ++RL+ WQ+F + +P S L+WN M Sbjct: 139 AIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNSM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MS GGWFFV SE I V + + LPG+GSY+A AI + D A L+A++ ML +I + DQ Sbjct: 199 MSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L++RP++ W++KF++E T P SWV L R + ++ W PL + + + Sbjct: 259 LVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCW---QPLGDWLAR-- 313 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 ++ + +L ++ A+ +I + ++ Sbjct: 314 ---HRPGTSAAPTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMSWSLFG 370 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 +++WLG +TM RV+ + +IA++IW PVG+WIG +PHI+ QP AQ+ A+FP N+ FPLV Sbjct: 371 HIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLV 430 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V +++ N LL+ GTQWYILFNVIAGA A PND KE A + ++ W W+ + Sbjct: 431 VGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTL 490 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILP IFP++VTGA TA GGAWNASIV+E+ASWG + L+ GLGAYI+ T+ G P ++ Sbjct: 491 ILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIA 550 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + +M FV+ +N+F+W LY + R RL Sbjct: 551 SIGVMSMFVVLMNKFVWRRLYAFAERRFRL 580 >gi|53718355|ref|YP_107341.1| putative transmembrane transporter [Burkholderia pseudomallei K96243] gi|167814398|ref|ZP_02446078.1| putative transmembrane transporter [Burkholderia pseudomallei 91] gi|52208769|emb|CAH34706.1| putative transmembrane transporter [Burkholderia pseudomallei K96243] Length = 577 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 91.9 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|126440929|ref|YP_001057811.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126220422|gb|ABN83928.1| ABC transporter, permease protein [Burkholderia pseudomallei 668] Length = 577 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 278/570 (48%), Positives = 367/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +PRDL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPIAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 93.1 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPRDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|167822873|ref|ZP_02454344.1| putative transmembrane transporter [Burkholderia pseudomallei 9] Length = 577 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 92.7 bits (229), Expect = 2e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|217420095|ref|ZP_03451601.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217397399|gb|EEC37415.1| ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 577 Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 365/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLAPCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 92.7 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|134279659|ref|ZP_01766371.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167901440|ref|ZP_02488645.1| putative transmembrane transporter [Burkholderia pseudomallei NCTC 13177] gi|134248859|gb|EBA48941.1| ABC transporter, permease protein [Burkholderia pseudomallei 305] Length = 577 Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 276/570 (48%), Positives = 365/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTRDARGLGAYVARATAAGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|167892962|ref|ZP_02480364.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894] Length = 577 Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 365/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLAPCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 92.7 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|226196748|ref|ZP_03792328.1| ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|225931279|gb|EEH27286.1| ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] Length = 577 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 276/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVI+GASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVISGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 92.7 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|126452920|ref|YP_001065052.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242317395|ref|ZP_04816411.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|126226562|gb|ABN90102.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242140634|gb|EES27036.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b] Length = 577 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLVPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 92.7 bits (229), Expect = 2e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|76811160|ref|YP_332348.1| putative transmembrane transporter [Burkholderia pseudomallei 1710b] gi|76580613|gb|ABA50088.1| putative transmembrane transporter [Burkholderia pseudomallei 1710b] Length = 576 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 18 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 77 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 78 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 137 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 138 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 197 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 198 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 257 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 258 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 317 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 318 VRLSTRGRAW------------AVRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 365 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 366 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 425 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 426 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 485 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 486 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 545 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 546 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 575 Score = 92.7 bits (229), Expect = 2e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 11 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 70 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 71 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 130 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 131 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 190 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 191 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 250 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 251 AIALYDQLLFRPMVAWAHK 269 >gi|171914592|ref|ZP_02930062.1| NitT/TauT family ABC transporter, permease protein [Verrucomicrobium spinosum DSM 4136] Length = 582 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 235/570 (41%), Positives = 338/570 (59%), Gaps = 6/570 (1%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 DL+ + ++G++ +LH + V D P+ V ++P YA RT LRM A Sbjct: 18 GWVDLVVMLALLGLLWSVLHFGRGMWVHFDEAKAPPLDTSVWNIPYYAGRTLLRMWMAFA 77 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 SL+FTFV AAK+R V++P LD++QS+P+LGFL+ TV FM L+PG + G E A Sbjct: 78 CSLVFTFVVGYAAAKNRVARAVILPALDVLQSVPVLGFLSATVTGFMALFPGSLFGVECA 137 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 IFAIFT QVWNMTF Y SL IP D+EE + ++ L+ WQ+F + +P SM L++N M Sbjct: 138 CIFAIFTGQVWNMTFGFYNSLVTIPADMEEAASTYGLNRWQRFTTVQLPASMHSLIFNSM 197 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MS GGWFFV SE I V + I LPG+GSY+A A++ D A L+A+ ML +I DQ Sbjct: 198 MSFGGGWFFVAQSEAISVMNKNIKLPGLGSYMASAVETGDNRAALWAVAAMLLIILASDQ 257 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L++RP++ W++K+R+E T P SW+ L R+ + + PL + ++ L Sbjct: 258 LVWRPLLAWADKYRMELTESGSPPRSWLYDLLRRAYVFEWFNHR----LEPLCDWIRHLT 313 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + P++ + + S L + + V ++ + +H + + Sbjct: 314 FRLTTVEPSRPQSRVPMGSLVVRGLGLVVLAW--VGSKCATGLVAAVVNVRDHVSPAQMG 371 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 + G T+ RV+V+ +A++IW+PVG+WIG RP ++ QP AQ+ A+FP N+ FP V Sbjct: 372 NIAMAGLFTLLRVLVMTTLATLIWVPVGVWIGLRPGVARFAQPLAQMAASFPVNMTFPFV 431 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V +H+ LM GTQWYILFNV+AGA A PND KE A ++ + GW WR + Sbjct: 432 VGFYVAWHIPMGWGSIFLMAMGTQWYILFNVVAGAMAIPNDLKEAARTYGLRGWNLWRTL 491 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILP IFPY+VTGA TA GGAWNASIV+E+A+WG L+ GLGA +AE+T +G P ++ Sbjct: 492 ILPAIFPYWVTGACTAAGGAWNASIVAELATWGPTQLKANGLGATLAEATHQGDKPVIIC 551 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + +M FV+ +NR LW LY R RL Sbjct: 552 SIAMMSLFVVLMNRVLWRRLYRLAERRFRL 581 >gi|296115222|ref|ZP_06833863.1| binding-protein-dependent transport systems inner membrane component [Gluconacetobacter hansenii ATCC 23769] gi|295978323|gb|EFG85060.1| binding-protein-dependent transport systems inner membrane component [Gluconacetobacter hansenii ATCC 23769] Length = 573 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 286/577 (49%), Positives = 377/577 (65%), Gaps = 13/577 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P R+ PN+FDL+ V+++G L + VP I LD LP YA RT Sbjct: 7 PTHGLRVRPNLFDLVGLVILMGFAVALATVGRHMLVPLSPATAQAIHLDPSWLPGYALRT 66 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 T RM +A++ S++FTF YA AAKSRR G +LVP+LDI+QS+PILGFLTFTVV+F+ L+P Sbjct: 67 TFRMFAALLASVVFTFTYAVWAAKSRRAGQILVPVLDILQSVPILGFLTFTVVFFLGLFP 126 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G+++GAELAAIF IFTSQ WNM FSMYQSL +P DLEE +R F L+ WQ+FW L VPF+ Sbjct: 127 GRMMGAELAAIFTIFTSQAWNMAFSMYQSLRTVPADLEEAARCFGLTAWQRFWRLEVPFA 186 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P LVWN M+SMSGGWF VV SE I VG+T I LPGIGSY+ AI +DLLAILYA++TM Sbjct: 187 IPSLVWNAMISMSGGWFMVVYSETITVGNTDIALPGIGSYVGTAIAHRDLLAILYAIVTM 246 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 L VI YDQLLFRP++ WS +F +E T G D WVL L R+T+ LR + + Sbjct: 247 LAVILAYDQLLFRPLVAWSARFSIEDTQGEAAPDPWVLALLRRTSLLRRASDALGRALTF 306 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 + + + MLDI W+ + G + + + + Y Sbjct: 307 IGW-------------LRIGRAPSDVTPSHMSGRMLDIAWWACLGGCTLVLGGKVLTYAA 353 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 HFT V V+ LG +T+ RV+V +++AS+IW+PVGIW+G + + Q AQ +AAF Sbjct: 354 GHFTASQVFQVMGLGGLTLLRVLVTLLVASLIWVPVGIWLGLDARRARRAQFVAQFMAAF 413 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PAN+FFPL V + +HLN N+WL+ LM+ GTQWYILFN++AGAS++P D E A +F + Sbjct: 414 PANLFFPLFVLFIVRFHLNSNIWLTPLMLLGTQWYILFNIVAGASSYPTDLLEAARNFQV 473 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 G WW ++LPGI P+++TGAITA GGAWNA+I +E+ASWG LR GLGAYIA++T Sbjct: 474 RGTLWWMRVMLPGIVPFFITGAITASGGAWNAAIATEMASWGSTTLRAQGLGAYIAQATI 533 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 G+ V LG+++M FVL NR +W PL Y R Sbjct: 534 DGATDRVGLGMVVMSLFVLLFNRAVWRPLANYAARHF 570 >gi|254260499|ref|ZP_04951553.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254219188|gb|EET08572.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 577 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 277/570 (48%), Positives = 366/570 (64%), Gaps = 12/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + + + W + A+ + ++ D+ Sbjct: 319 VRLSTRGRAW------------AVRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLA 366 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 V G +T+ RV+VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL Sbjct: 367 DVARNGALTLARVLVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLA 426 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L P +WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR + Sbjct: 427 VFAIVRFGLAPAIWLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREV 486 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPGI PYYVTGAITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + L Sbjct: 487 MLPGILPYYVTGAITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIAL 546 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 GV M V+A+NR +W PLY + R RL Sbjct: 547 GVATMSLLVIAMNRLIWRPLYAFAERRSRL 576 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|121535326|ref|ZP_01667139.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] gi|121306112|gb|EAX47041.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] Length = 580 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 234/570 (41%), Positives = 338/570 (59%), Gaps = 4/570 (0%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 + D+L V ++ +L+ +P + + I+ D LP YA R+ LRM A Sbjct: 14 GLIDILVIAFVFALLFSVLYLGAGMVIPFSPENQIEISTDPADLPYYAGRSLLRMFIAYG 73 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 SLLFTF+Y ++AAKSR VLVP+LDI+QS+P+LGFL+ T+ F+ L+P ++G ELA Sbjct: 74 ASLLFTFIYGSIAAKSRTAEKVLVPLLDILQSVPVLGFLSVTITMFIGLFPNSLLGVELA 133 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +IFAIFT Q WNMTFS Y SL +P+DL+E + RL+ WQ+F L VPF+M LVWN M Sbjct: 134 SIFAIFTGQCWNMTFSFYHSLTTLPQDLKEAAAVLRLNWWQRFIKLEVPFAMISLVWNSM 193 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MS G WFF+ ASE I V + I LPG+GS++A A+++ ++ A+ YA+LTM+ +I L DQ Sbjct: 194 MSFGGAWFFLAASEAITVLNQDIRLPGVGSFMAAAVEKGNMSAVGYAILTMIIMIMLVDQ 253 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L +RP++VWS KF++ERT I + S V + ++ F+ + + FF P++ + Sbjct: 254 LFWRPIVVWSQKFKMERTEAIEVSTSLVYDILKRAVFVAW---AQKYFFGPITQLIDSAF 310 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 + L ++ + +Q I ++ + ++ Sbjct: 311 NRCARVSGKVAAQIEHLTPLSYLTVAMKWALLLATIYYVGQQTYQGI-LLIASMGFDKLV 369 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 +I LG T+ RV +I + +PVG+WIG P +S QP Q+ A+FPAN+ +P V Sbjct: 370 KIITLGFYTLGRVTAASLIGVLWTVPVGVWIGTNPRLSKFFQPIVQVTASFPANMIYPFV 429 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V Y +N L LLM+ GTQWYILFNVIAGA A P D KE ++ F ++GW+ WR + Sbjct: 430 VVLYLNYGINFELGSILLMMLGTQWYILFNVIAGAMAIPTDLKEASTVFKLSGWQKWRKL 489 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILP IFP+ +TG ITA GGAWNASIVSE+ +W L TGLG +I + TE G + ++ Sbjct: 490 ILPAIFPHLITGCITASGGAWNASIVSELVTWKDQQLNATGLGNFIGQVTEAGDWSGILG 549 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G+++MC FV+ +NR W LY L Sbjct: 550 GIIVMCAFVIIINRLFWRRLYHLAETKYHL 579 >gi|296137104|ref|YP_003644346.1| binding-protein-dependent transport systems inner membrane component [Thiomonas intermedia K12] gi|294341397|emb|CAZ89814.1| putative ABC-type transport system, permease component [Thiomonas sp. 3As] gi|295797226|gb|ADG32016.1| binding-protein-dependent transport systems inner membrane component [Thiomonas intermedia K12] Length = 570 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 254/572 (44%), Positives = 361/572 (63%), Gaps = 14/572 (2%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 PN DL+A LVIG++ I+ H ++ VP + + V ++L LP+YA T LRML+A Sbjct: 12 LPNRRDLIALPLVIGMLLIIGHASRQMAVPFHLGETVALSLKPADLPEYALYTVLRMLAA 71 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 + S +FT +YA +AA +R ++VP+LD++QS+PILG+L+ TV F+ L+PG ++G + Sbjct: 72 LAASTVFTLIYAWIAANNRYAEKIMVPLLDVLQSVPILGYLSITVTGFIALFPGSMLGLQ 131 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 A IFA+FTSQ WNMTFS+YQSL +PRDL E + +RL+ WQ+FW L +P++ PGL+WN Sbjct: 132 FAVIFAVFTSQAWNMTFSLYQSLKTVPRDLTEAATLYRLNAWQRFWKLELPYAAPGLLWN 191 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MMSMSGGWFFVVA+E + V + +PGIGSYIA AI ++L AI +A+L M VI Y Sbjct: 192 AMMSMSGGWFFVVAAEALTVAGQQVSVPGIGSYIAAAIAAKNLGAIGWAILAMALVILSY 251 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 D LLFRP++ W++KFRL+ T + S VL R+T + + + + Sbjct: 252 DFLLFRPIVAWADKFRLDNTVSVDAPRSVVLDFLRRTRLTQRLARLPAVLWEMSVRLL-- 309 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 P L + S D + + +G+ + F + Sbjct: 310 ------------PAVPLHKSPQRAPSVWGDRVFVVSMVLFTLGLIVALFLVLPRDFGWLQ 357 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V +V+ LG T +V VL+ I+++IW+PVGIW+G RP ++ QP AQ LAAFPAN+ FP Sbjct: 358 VGHVMLLGAFTALKVFVLVAISALIWVPVGIWVGLRPRWAAVAQPVAQFLAAFPANLLFP 417 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 LVV + ++HLN N++ + LMI G+QWY+LF+VI ASA P+D +E + + GW WR Sbjct: 418 LVVVAIVHWHLNVNVFTAPLMILGSQWYVLFSVIGAASALPSDLREAGRNLGLRGWLLWR 477 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + LP +FP +VTGA+TA GGAWNASIV+EV SWG L TGLGAYI E+T++G +V Sbjct: 478 KLYLPAVFPGFVTGALTASGGAWNASIVAEVVSWGSHTLVATGLGAYITEATQQGQTLKV 537 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGV +M +V+A+NR +WH LY +RL Sbjct: 538 GLGVGVMALYVIAINRLVWHRLYKIAATRVRL 569 >gi|326403633|ref|YP_004283715.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325050495|dbj|BAJ80833.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 577 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 279/577 (48%), Positives = 375/577 (64%), Gaps = 10/577 (1%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P + R PN +D+ A LV ++ + H Q T P + I L+ LP YA R Sbjct: 7 PALVHGRRLPNTWDVAAMALVFALLIGVAHVAQGTMAPLARMKSGHIHLNPAWLPGYALR 66 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM +A+++SL FTF ATLAAKSRR ++++PILDI+QSIPILGF++FTV++F++L+ Sbjct: 67 TTLRMFAALLVSLGFTFTVATLAAKSRRAAIIIIPILDILQSIPILGFISFTVLFFLHLF 126 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ +GAELA +F IFTSQ WNM FS YQSL P DL E RSF L+ WQ+FW L VPF Sbjct: 127 PGQELGAELAVVFVIFTSQAWNMAFSFYQSLTTEPADLVEACRSFGLTPWQRFWRLDVPF 186 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++PGLVWN M+SMSGGWFFVVASE I VG T LPGIGSY+A+A++ +D AI+YA+L Sbjct: 187 AVPGLVWNTMLSMSGGWFFVVASEAITVGHTTFTLPGIGSYVAVALQHRDFAAIVYALLA 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ML VI LYDQLLFRP++ WS KFR E + WVL + ++ + Sbjct: 247 MLVVILLYDQLLFRPLVAWSGKFRFETVPSAGETEPWVL----------RLLRRTFLLRA 296 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + + + F ++ + D ++ VV A A Q + + Sbjct: 297 AGDWLSDQFAHVVRLRLGRADRKFGSAGLDRATGRIGDAAFYAVVIIAAGAAAAQVVEFC 356 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + D+ + L T+ RV+ ++I+ +IW+PVG+W+GFRP + +QP AQ LAA Sbjct: 357 ARTMYWSDLAQCVVLAFYTLARVIAALVISCVIWVPVGVWVGFRPWATRLVQPAAQFLAA 416 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FP+VV+ + ++ L PN+WL+ LMI GTQWY+LFNV+AGA+A P D KE AS+F Sbjct: 417 FPANLVFPVVVAGIVHFRLTPNIWLTPLMILGTQWYVLFNVVAGAAALPGDLKEAASNFR 476 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 ++G WWR +I+PGI PY+VTGA+TA G AWNASIV+EVASWGH L GLGAYIA++T Sbjct: 477 LSGLLWWRRLIIPGILPYFVTGALTATGAAWNASIVAEVASWGHTTLVARGLGAYIAQAT 536 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584 G+ +VLGV +M FVL NR +W PLY Y +R Sbjct: 537 MAGNTSRIVLGVAVMAAFVLGFNRLVWRPLYAYASRR 573 >gi|86605760|ref|YP_474523.1| taurine ABC transporter permease protein [Synechococcus sp. JA-3-3Ab] gi|86554302|gb|ABC99260.1| NitT/TauT family ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 575 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 248/581 (42%), Positives = 347/581 (59%), Gaps = 12/581 (2%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYAS 66 P + RR+ D + + ++ ++ T +VP I LD +LP YA+ Sbjct: 6 SPEVLRRLPAGAADGAIILGTLVLLGLVAQVGAGTFERFQPPAVVPHIDLDPRNLPYYAA 65 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 R+TLRM A+ S LFT +Y +AAKSR +L+P+LDI+QS+P+LGFL+ TV F+ L Sbjct: 66 RSTLRMFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDILQSVPVLGFLSITVTGFIAL 125 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 +PG ++G E A+IFAIFTSQVWNMTFS YQSL +P++L E +RLSGWQ+F L VP Sbjct: 126 FPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAVTLYRLSGWQRFVQLEVP 185 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +M GL+WN MMS GGWFFV ASE I V + LPG+GSY+ A++ +DL + +A+L Sbjct: 186 AAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALL 245 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 TM VI L DQL +RP++ WS+KFRLE++ G +SW+ L R IG N+ Sbjct: 246 TMAVVILLVDQLFWRPLVAWSDKFRLEQSAGAAAPESWLYDLLTTARIPRLIG----NWL 301 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +P +L L +R+ P N + +R +L + + G+ I I + + Sbjct: 302 APSRELADRLLSHLTRLRWGDPPN---PEAERRRERLLTQLSWAAIAGIGIWIVY----F 354 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + + +VL LG +T+ RV VL++ A++IW P+G+ IGF P ++ +QP Q LA Sbjct: 355 VTTTVGFGEVLLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNPGLAKLLQPVVQFLA 414 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN FP ++ LLM G QWYILFN IAGA + P D +E+A Sbjct: 415 AFPANFLFPFATLFFIRTQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDV 474 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + GW+ W+ +I+PGIF +VTG ITA GGAWNASIVSE+ +WG L+ TGLG YIAE+ Sbjct: 475 GLRGWQRWQKLIIPGIFSAWVTGGITASGGAWNASIVSEIVAWGSTTLKATGLGTYIAEA 534 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 T G +P + LG+ +M FV+ +NR W LY L Sbjct: 535 TAVGDWPRITLGIGMMSLFVVGINRLFWRRLYQLAEEKYHL 575 >gi|148260439|ref|YP_001234566.1| binding-protein-dependent transport systems inner membrane component [Acidiphilium cryptum JF-5] gi|146402120|gb|ABQ30647.1| binding-protein-dependent transport systems inner membrane component [Acidiphilium cryptum JF-5] Length = 577 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 279/577 (48%), Positives = 375/577 (64%), Gaps = 10/577 (1%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P + R PN +D+ A LV ++ + H Q T P + I L+ LP YA R Sbjct: 7 PALVHGRRLPNTWDVAAMALVFALLIGVAHVAQGTMAPLARMKSGHIHLNPAWLPGYALR 66 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TTLRM +A+++SL FTF ATLAAKSRR ++++PILDI+QSIPILGF++FTV++F++L+ Sbjct: 67 TTLRMFAALLVSLGFTFTVATLAAKSRRAAIIIIPILDILQSIPILGFISFTVLFFLHLF 126 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 PG+ +GAELA +F IFTSQ WNM FS YQSL P DL E RSF L+ WQ+FW L VPF Sbjct: 127 PGQELGAELAVVFVIFTSQAWNMAFSFYQSLTTEPADLVEACRSFGLTPWQRFWRLDVPF 186 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++PGLVWN M+SMSGGWFFVVASE I VG T LPGIGSY+A+A++ +D AI+YA+L Sbjct: 187 AVPGLVWNTMLSMSGGWFFVVASEAITVGHTTFTLPGIGSYVAVALQHRDFAAIVYALLA 246 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ML VI LYDQLLFRP++ WS KFR E + WVL + ++ + Sbjct: 247 MLVVILLYDQLLFRPLVAWSGKFRFETVPSAGETEPWVL----------RLLRRTFLLRA 296 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + + + F ++ + D ++ VV A A Q + + Sbjct: 297 AGDWLSDQFAHVVRLRLGRADRKFGSAGLDRATGRIGDAAFYAVVIIAAGAAAAQVVEFC 356 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + D+ + L T+ RV+ ++I+ +IW+PVG+W+GFRP + +QP AQ LAA Sbjct: 357 ARTMYWSDLAQCVVLAFYTLARVIAALVISCVIWVPVGVWVGFRPWATRLVQPAAQFLAA 416 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FP+VV+ + ++ L PN+WL+ LMI GTQWY+LFNV+AGA+A P D KE AS+F Sbjct: 417 FPANLVFPVVVAGIVHFRLAPNIWLTPLMILGTQWYVLFNVVAGAAALPGDLKEAASNFR 476 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 ++G WWR +I+PGI PY+VTGA+TA G AWNASIV+EVASWGH L GLGAYIA++T Sbjct: 477 LSGLLWWRRLIIPGILPYFVTGALTATGAAWNASIVAEVASWGHTTLVARGLGAYIAQAT 536 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584 G+ +VLGV +M FVL NR +W PLY Y +R Sbjct: 537 MAGNTSRIVLGVAVMAAFVLGFNRLVWRPLYAYASRR 573 >gi|311063794|ref|YP_003970519.1| ABC transporter permease [Bifidobacterium bifidum PRL2010] gi|310866113|gb|ADP35482.1| Permease protein of ABC transporter system [Bifidobacterium bifidum PRL2010] Length = 593 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 239/575 (41%), Positives = 350/575 (60%), Gaps = 13/575 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RRI ++ + + G++ LL I E P + ++ D+H LP YA R+ RM Sbjct: 31 RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPST--VSDDLHLLPYYALRSVFRM 88 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ +SL+F+F+Y AA+ RRL MVL+P+LDI+QS+PILGFL+ TV +M L+PG ++ Sbjct: 89 FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM L Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN MMS+ GGWFF+ ASEMI V + LPG+GS++A+A + + L +L+A++TM+ V+ Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 L D LL++P+ W+ KFR+ + + S VL + R++ + P++N Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSVLRRSGISDALALVG----RPIANL 324 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + L R LG +P + LDI + ++ + W + +I + Sbjct: 325 MFWLTRPLGRTGARWPAAGTR-------RRTLDIAFMALMAVACLAGLWMLVRFISDGEG 377 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + +V + + LG IT RV +L ++ SIIW+P+G+ IG P IS +QP Q+LA+FP+N Sbjct: 378 FAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFVQPLVQVLASFPSNF 437 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V +H++ + LLM GTQWYILFNVIAGASA P+D +E +FH+ + Sbjct: 438 TFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLDTRQ 497 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 W +ILP +F + TG ITA GGAWNASIVSE+ ++GH L GLG YIA +T G Sbjct: 498 RWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAVGDT 557 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + ++GV +M FV+ +NR W PL Y R + Sbjct: 558 GKTIIGVAVMSVFVVGVNRLFWRPLQTYAERRFSV 592 >gi|39998041|ref|NP_953992.1| ABC transporter permease [Geobacter sulfurreducens PCA] gi|39984986|gb|AAR36342.1| ABC transporter, permease protein [Geobacter sulfurreducens PCA] Length = 538 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 267/538 (49%), Positives = 351/538 (65%), Gaps = 12/538 (2%) Query: 51 IVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110 + ++LD LP YA RT +RM +A+ +SL FT Y TLAAKSRRL +LVP LDI+QS+ Sbjct: 11 VPSLSLDPRHLPYYALRTVIRMGAALCLSLAFTLTYGTLAAKSRRLSPILVPTLDILQSV 70 Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170 PILGFL+ TV F+ L+PG ++G E A+IFAIFTSQ WNM FS YQSL IPRDL E + Sbjct: 71 PILGFLSVTVTGFIALFPGSLMGVEAASIFAIFTSQAWNMAFSFYQSLKTIPRDLGEAAT 130 Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230 F LSGWQ+FW + PF++P LVWN+MMS+SGGWFFVVASE I VG T + LPGIGSY+A Sbjct: 131 LFGLSGWQRFWRVEAPFAVPPLVWNIMMSVSGGWFFVVASEAITVGKTAVTLPGIGSYVA 190 Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFR 290 LAI QD+ AI +A+ TML VI LYDQL FRP++ W+ KFR+E + +SW L LF Sbjct: 191 LAIHRQDMGAIAWALATMLAVILLYDQLFFRPLVAWAEKFRVELSQARIAPESWCLTLFA 250 Query: 291 KTNFL-RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349 +T FL R + + ++ G R + + ++D W Sbjct: 251 RTRFLARALSLAGALPELLTERLPRRRRPRTGEHRHR----------GRPAARIMDRIWN 300 Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 A+ W+ ++ + + ++L V LG TM RV VL+I+AS+ W+P+G+ IG Sbjct: 301 AAFAVAALWALWKLARFV-SVIPFGEILSVFGLGLATMARVAVLLIMASLFWVPIGVTIG 359 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 P ++++QP AQ LAAFPAN+ FP V + + LNP +W + LMI GTQWYILFNVI Sbjct: 360 LNPRWTTRVQPVAQFLAAFPANLLFPAAVVLIVRFRLNPEIWTAPLMILGTQWYILFNVI 419 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AGASA PND +E A++ ++GW WR ++LPGIFP +TG +TA GG WNASIV+EV SW Sbjct: 420 AGASAIPNDLREAAANLGLSGWELWRRLLLPGIFPSLITGLVTASGGTWNASIVAEVVSW 479 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G L TGLG+ IA TE+G +P +VLG+ +M +V+ LNRF W LYL RL Sbjct: 480 GPTTLTATGLGSAIARWTEQGDYPHIVLGIAVMSMYVVCLNRFFWRRLYLLAQTRYRL 537 >gi|310286892|ref|YP_003938150.1| nitrate/sulfonate/taurine transport system, permease protein [Bifidobacterium bifidum S17] gi|309250828|gb|ADO52576.1| nitrate/sulfonate/taurine transport system, permease protein [Bifidobacterium bifidum S17] Length = 593 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 238/575 (41%), Positives = 350/575 (60%), Gaps = 13/575 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RRI ++ + + G++ LL I E P + ++ D+H LP YA R+ RM Sbjct: 31 RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPST--VSDDLHLLPYYALRSVFRM 88 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ +SL+F+F+Y AA+ RRL MVL+P+LDI+QS+PILGFL+ TV +M L+PG ++ Sbjct: 89 FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM L Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN MMS+ GGWFF+ ASEMI V + LPG+GS++A+A + + L +L+A++TM+ V+ Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 L D LL++P+ W+ KFR+ + + S VL + R++ + P+++ Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSVLRRSGISDALALVG----RPIADL 324 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + L R LG +P + LDI + ++ + W + +I + Sbjct: 325 MFWLTRPLGRTGARWPAAGTR-------RRTLDIAFMALMAVACLAGLWMLVRFISDGEG 377 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + +V + + LG IT RV +L ++ SIIW+P+G+ IG P IS +QP Q+LA+FP+N Sbjct: 378 FAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFVQPLVQVLASFPSNF 437 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V +H++ + LLM GTQWYILFNVIAGASA P+D +E +FH+ + Sbjct: 438 TFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLDTRQ 497 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 W +ILP +F + TG ITA GGAWNASIVSE+ ++GH L GLG YIA +T G Sbjct: 498 RWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAVGDT 557 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + ++GV +M FV+ +NR W PL Y R + Sbjct: 558 GKTIIGVAVMSVFVVGVNRLFWRPLQAYAERRFSV 592 >gi|224282450|ref|ZP_03645772.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium bifidum NCIMB 41171] Length = 593 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 238/575 (41%), Positives = 349/575 (60%), Gaps = 13/575 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RRI ++ + + G++ LL I E P + ++ D+H LP YA R+ RM Sbjct: 31 RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPST--VSDDLHLLPYYALRSVFRM 88 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ +SL+F+F+Y AA+ RRL MVL+P+LDI+QS+PILGFL+ TV +M L+PG ++ Sbjct: 89 FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 148 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM L Sbjct: 149 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 208 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN MMS+ GGWFF+ ASEMI V + LPG+GS++A+A + + L +L+A++TM+ V+ Sbjct: 209 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 268 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 L D LL++P+ W+ KFR+ + + S VL + R++ + P+++ Sbjct: 269 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSILRRSGISDALALVG----RPIADL 324 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + L R LG +P + LDI + ++ + W + +I + Sbjct: 325 MFWLTRPLGRTGARWPAAGTR-------RRTLDIAFMALMAVACLAGLWMLVRFISDGEG 377 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + +V + + LG IT RV +L ++ SIIW+P+G+ IG P IS QP Q+LA+FP+N Sbjct: 378 FAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFAQPLVQVLASFPSNF 437 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V +H++ + LLM GTQWYILFNVIAGASA P+D +E +FH+ + Sbjct: 438 TFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLDTRQ 497 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 W +ILP +F + TG ITA GGAWNASIVSE+ ++GH L GLG YIA +T G Sbjct: 498 RWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAVGDT 557 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + ++GV +M FV+ +NR W PL Y R + Sbjct: 558 GKTIIGVAVMSVFVVGVNRLFWRPLQAYAERRFSV 592 >gi|330994257|ref|ZP_08318185.1| Glycine betaine/L-proline transport system permease protein proW [Gluconacetobacter sp. SXCC-1] gi|329758724|gb|EGG75240.1| Glycine betaine/L-proline transport system permease protein proW [Gluconacetobacter sp. SXCC-1] Length = 572 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 281/572 (49%), Positives = 379/572 (66%), Gaps = 13/572 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN+ DLL + ++ ++ + VP + I L LP YA RTTLRM Sbjct: 11 RVRPNLADLLGLLAIMAGAAVIATAGRHMLVPIPASETGTIHLSPAWLPAYAVRTTLRMF 70 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A+ SL+FTF YA AAKSRR VL+P+LDI+QS+PILGFLTFTVV+F+ L+PG+++G Sbjct: 71 AALAASLVFTFTYAVWAAKSRRAAQVLIPLLDILQSVPILGFLTFTVVFFLGLFPGRMMG 130 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AELAAIF IFTSQ WNM F+MYQ+L +P DLEE +R F L+ WQ+FW L VPF++P LV Sbjct: 131 AELAAIFTIFTSQAWNMAFAMYQALRTVPPDLEEAARCFGLTPWQRFWRLEVPFAIPSLV 190 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN M+SMSGGWF VV SE I VG T I LPGIGSY+ +AI+++++ AI YA++ ML VI Sbjct: 191 WNTMISMSGGWFMVVYSETITVGSTDIALPGIGSYVGVAIEQRNIGAIFYAIIAMLAVIT 250 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 +YDQLLFRP++ WS +F + + D WVL L R+T+ LR + + + + Sbjct: 251 IYDQLLFRPLVAWSARFSTDDGATMAAPDPWVLTLLRRTHLLRQFCLRLGDTMTRIG-WL 309 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 R +R P S ++D W + A+ I W++ Y +H++ Sbjct: 310 AIGPRPSQPVRAIIP------------SRLMDGAWGMALAVCALTIGWKTWTYGSSHYSV 357 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 VL+V+ LG IT+ RV+ +I+AS++W+P+GIW+G P + Q AQ +AAFPAN+F Sbjct: 358 AQVLHVVMLGGITLLRVMGTVIVASLVWVPLGIWLGLSPRRARHAQMAAQFMAAFPANLF 417 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FPL+V + ++HLN N+WL+ LM+ GTQWYILFN++AGAS++P D E A +FH+ GW W Sbjct: 418 FPLMVIGIVHWHLNSNIWLTPLMLLGTQWYILFNIVAGASSYPGDLLEAARNFHVRGWLW 477 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR I+LPGI PY++TGA+TA GGAWNA+I +EVASWG L GLGAYIA +T G+ Sbjct: 478 WRRIMLPGIMPYFITGALTASGGAWNAAIATEVASWGDTTLSAQGLGAYIAHATVAGATD 537 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 V LG+ IM FVL LNR LW PL Y R Sbjct: 538 RVGLGMAIMAGFVLLLNRVLWRPLANYAARHY 569 >gi|255019932|ref|ZP_05292006.1| binding-protein-dependent transport systems inner membrane component [Acidithiobacillus caldus ATCC 51756] gi|254970591|gb|EET28079.1| binding-protein-dependent transport systems inner membrane component [Acidithiobacillus caldus ATCC 51756] Length = 572 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 252/570 (44%), Positives = 364/570 (63%), Gaps = 14/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 N D++ L++ +L H ++ +VP + + +PI+ +L A TTLRML+A+ Sbjct: 16 NRQDIVFLPLLVLGFFVLAHATRQMSVPFTLGEALPISTRPSALVDDALYTTLRMLAAVA 75 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 SL+FT Y LAAK+R G +L+P+LDI+QS+PILG+L+ TV F+ L+PG +IG +LA Sbjct: 76 ASLIFTIFYGLLAAKNRYAGKILIPLLDILQSVPILGYLSITVTGFIALFPGSLIGVQLA 135 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +FA+FTSQVWNMTF+ YQ+L +P+DL+E +R +RL+ WQ+F+ L +PF++P L+WN M Sbjct: 136 VVFAVFTSQVWNMTFAFYQALITLPKDLDEAARLYRLNAWQRFFRLELPFAVPPLLWNTM 195 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MSMSGGWFFVVA+E I V + +PGIGSYIA+AI +++L A+ +A+L ML VI LYD Sbjct: 196 MSMSGGWFFVVAAEAITVAGHEVMVPGIGSYIAMAIAQKNLAAVFWAILAMLLVIGLYDF 255 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRP++ W++KF+LE + SWVL R++ + + + + Sbjct: 256 LLFRPVVAWADKFKLETGADLQRPRSWVLDFLRRSRLAQAVAMVPAELWEFSLRIL---- 311 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 P ++ D+ + +V GV + WQ + F ++ Sbjct: 312 ----------PPGRPHWVGEEKRRPWADVLFLLLVGGVLVYGFWQLYATLARSFDLTTLV 361 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 +V++LG +T RV+VL+ ++ +IW+PVGI +G RP +S +IQ Q LAAFPAN+ FP+V Sbjct: 362 HVLFLGLVTGLRVMVLVALSLLIWVPVGILVGLRPGLSGRIQAAIQFLAAFPANLLFPMV 421 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + ++HLN N+W+S LMI G+QWY+LFNVI A+A P D KE A + + GW W+ + Sbjct: 422 VLAILHWHLNVNIWVSPLMILGSQWYVLFNVIGAAAALPADLKEAARNLGLRGWLLWKRL 481 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPG FP VTG ITA GGAWNASIV+EV SWG+ L TGLGAYI +T G+ V L Sbjct: 482 LLPGTFPGTVTGGITASGGAWNASIVAEVVSWGNHTLVATGLGAYITLATAAGNLNAVAL 541 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G+ +M +V+ +NR W LY R LRL Sbjct: 542 GIGVMSFYVVVVNRLFWRRLYDLAARRLRL 571 >gi|283782843|ref|YP_003373597.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] gi|298253320|ref|ZP_06977112.1| ABC-type anion transporter, duplicated permease component [Gardnerella vaginalis 5-1] gi|283442170|gb|ADB14636.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] gi|297532715|gb|EFH71601.1| ABC-type anion transporter, duplicated permease component [Gardnerella vaginalis 5-1] Length = 582 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 230/576 (39%), Positives = 339/576 (58%), Gaps = 13/576 (2%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 + R + +I + + V G+ L+ I + P I ++ D+ +LP Y R+ R Sbjct: 19 NTRFWSDIIVCVGIIAVFGVTAFLIQRINQPIGPSGIPSK--VSTDLINLPYYTLRSVFR 76 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML A+V SL+FT VY +LAA+SRRLG VL+P+LDI+QS+PILGFL+ TV ++ ++PG + Sbjct: 77 MLIALVASLIFTIVYGSLAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSM 136 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G E A+IFAIFTSQ WNMTFS ++SL + P++L+E RS +L+ WQ+FW L +P +M Sbjct: 137 LGVEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIP 196 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 L+WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E L I +A+++M+ V Sbjct: 197 LLWNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIV 256 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 + D L++P+ W+ +FR+ ++ S +L L R ++ I F P+ Sbjct: 257 VLALDFFLWKPLTAWAERFRITQSASDNERHSAILTLIRHSHADEVIS----KLFLPIRE 312 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 ++K+ R G +P Q + D + ++ + A + ++ Sbjct: 313 WLEKVTRPFGRTGSKWPHKAAQ-------HKLGDWVFNVIMLIIVAAGAAHMLYFVYTTA 365 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + + LG IT RV LI+I+S+IW+PVG+ IG P IS +QP Q+LA+FPAN Sbjct: 366 GLHEFITAGMLGGITFMRVAALILISSLIWVPVGVVIGMNPKISRIMQPIVQILASFPAN 425 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 FP ++ +H++ +LM GTQWYILFNVIAGASA P+D +E+ SF + Sbjct: 426 FIFPFAMAWFMSWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMTRSFRLDRT 485 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 W+ +ILP IF + TG ITA GGAWNASIVSE+ +G H+ T GLGAYI +T G Sbjct: 486 LRWKTLILPSIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMETQGLGAYITNATTLGD 545 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++GV +M V+ NR W P+ + L Sbjct: 546 SARTLVGVTVMSLIVVLSNRLFWSPMQRISEKRYVL 581 >gi|308235357|ref|ZP_07666094.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC 14018] gi|311115105|ref|YP_003986326.1| ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019] gi|310946599|gb|ADP39303.1| ABC superfamily ATP binding cassette transporter, membrane protein [Gardnerella vaginalis ATCC 14019] Length = 582 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 232/576 (40%), Positives = 348/576 (60%), Gaps = 13/576 (2%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 + R + +I + + + G+ LL I + P+ I ++ D+ +LP Y R+ R Sbjct: 19 NTRFWSDIIVCVGIIALFGVSAFLLQRINQPIGPKGIPS--AVSTDLINLPYYTLRSVFR 76 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M+ A++ SL+FT +Y +LAA+SRRLG VL+P+LDI+QS+PILGFL+ TV ++ ++PG + Sbjct: 77 MMLALIASLIFTIIYGSLAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSM 136 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G E A+IFAIFTSQ WNMTFS ++SL + P++L+E RS +L+ WQ+FW L +P +M Sbjct: 137 MGVEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIP 196 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 L+WN MMS+ GGWFF+ ASEMI V + LPG+GS++A + E L I +A+L+M+ V Sbjct: 197 LLWNCMMSVGGGWFFLTASEMISVNNHTYALPGVGSFVAQSAAENKLGNIWWAILSMIVV 256 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 + D L++P+ W+ +FR+ ++ S VL L R ++ I FSP+ Sbjct: 257 VLAIDFFLWKPLTAWAERFRITQSASDEERKSAVLTLIRHSHADEVIS----KLFSPIRE 312 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 ++ + R G +P Q + D+ + V+ + +G+A Q + ++ Sbjct: 313 WLEIITRPFGRTGSQWPRKASQ-------RKLGDLVFNIVMAVLILGLAAQMLYFVATRT 365 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 Q+ LG +T RV VLI ++S+IW+PVG++IG P IS +QP Q+LA+FPAN Sbjct: 366 GLQEFATAGALGALTFARVAVLIFVSSLIWVPVGVYIGMNPKISRIMQPVVQILASFPAN 425 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 FP + +H++ +LM GTQWYILFNVIAGASA P+D +E+A SF + Sbjct: 426 FVFPFAMMWFMAWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMARSFRLNRM 485 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 W+ ++LP IF + TG ITA GGAWNASIVSE+ +G H+ T GLGAYI +T G Sbjct: 486 LKWKTLVLPAIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMATQGLGAYITNATTVGD 545 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + ++GV +M V+ NR W PL Y + L Sbjct: 546 SVKTLVGVTVMSLIVVLSNRLFWTPLQRYSAKRFVL 581 >gi|297242881|ref|ZP_06926819.1| ABC-type anion transporter, duplicated permease component [Gardnerella vaginalis AMD] gi|296889092|gb|EFH27826.1| ABC-type anion transporter, duplicated permease component [Gardnerella vaginalis AMD] Length = 582 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 230/576 (39%), Positives = 340/576 (59%), Gaps = 13/576 (2%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 + R + +I + + V G+ L+ I + P I ++ D+ +LP Y R+ R Sbjct: 19 NTRFWSDIIVCVGIIAVFGVTAFLIQRINQPIGPSGIPSK--VSTDLINLPYYTLRSVFR 76 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ML A+V SL+FT VY ++AA+SRRLG VL+P+LDI+QS+PILGFL+ TV ++ ++PG + Sbjct: 77 MLIALVASLIFTIVYGSIAARSRRLGKVLIPLLDILQSVPILGFLSATVTIWLVIFPGSM 136 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G E A+IFAIFTSQ WNMTFS ++SL + P++L+E RS +L+ WQ+FW L +P +M Sbjct: 137 LGVEAASIFAIFTSQAWNMTFSFHRSLLSEPKELDEAVRSLQLTHWQRFWVLDMPNAMIP 196 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 L+WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E L I +A+++M+ V Sbjct: 197 LLWNCMMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAENKLGLIWWAIVSMVIV 256 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 + D L++P+ W+ +FR+ ++ S +L L R ++ I F P+ Sbjct: 257 VLALDFFLWKPLTAWAERFRITQSASDNERHSAILTLIRHSHADEVIS----KLFLPIRE 312 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 ++K+ R G +P Q + D + ++ + A + ++ Sbjct: 313 WLEKVTRPFGRTGSKWPHKAAQ-------HKLGDWVFNVIMLIIVAAGAAHMLYFVYTTA 365 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + + LG IT RV VLI+I+S+IW+PVG+ IG P IS +QP Q+LA+FPAN Sbjct: 366 GLHEFITAGMLGGITFIRVAVLILISSLIWVPVGVVIGMNPKISRIMQPIVQILASFPAN 425 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 FP ++ +H++ +LM GTQWYILFNVIAGASA P+D +E+ SF + Sbjct: 426 FIFPFAMAWFMAWHIDLGWGSIILMALGTQWYILFNVIAGASAIPDDLREMTRSFRLDRT 485 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 W+ +ILP IF + TG ITA GGAWNASIVSE+ +G H+ T GLGAYI +T G Sbjct: 486 LRWKTLILPSIFGSWCTGGITAAGGAWNASIVSEIVEYGKNHMETQGLGAYITNATTLGD 545 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++GV +M V+ NR W P+ + L Sbjct: 546 SARTLVGVTVMSLIVVLSNRLFWSPMQRISEKRYVL 581 >gi|213691332|ref|YP_002321918.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522793|gb|ACJ51540.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 594 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 238/574 (41%), Positives = 344/574 (59%), Gaps = 11/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ ++ + + G+I +L I E P+ + ++ ++ LP YA R+ RML Sbjct: 31 RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQ--VSTNLADLPYYALRSVFRML 88 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTF+Y T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 89 VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 148 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + P +L+E +RS +L+ WQ+FW L VP +M L+ Sbjct: 149 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 208 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++TM+ V+ Sbjct: 209 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 268 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + F P+ + Sbjct: 269 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVA----WLFRPVGDLF 324 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG + + S LD+ + +V Q + I + Sbjct: 325 DTLTRPLGRTGGRWAADV-----KSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGF 379 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ LG +T RV +L ++ S IW+P+G IG P +S +QP Q+LA+FP+N Sbjct: 380 GELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 439 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ N LLM GTQWYILFNVIAGAS P+D +E+ SF + W+ Sbjct: 440 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 499 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G+ Sbjct: 500 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 559 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++GV +M FV+A+NR W+PL R L Sbjct: 560 RTIIGVTVMSVFVVAVNRLFWNPLQRMAERRFAL 593 >gi|317482033|ref|ZP_07941058.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] gi|291517374|emb|CBK70990.1| ABC-type anion transport system, duplicated permease component [Bifidobacterium longum subsp. longum F8] gi|316916600|gb|EFV37997.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] Length = 596 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 237/574 (41%), Positives = 343/574 (59%), Gaps = 11/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ ++ + + G+I +L I E P+ + ++ ++ LP YA R+ RM Sbjct: 33 RLASDVLVAAGILALFGLIAWILPAIGEPIGPKGVPSQ--VSTNLADLPYYALRSVFRMF 90 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTF+Y T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 91 VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + P +L+E +RS +L+ WQ+FW L VP +M L+ Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++TM+ V+ Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + F P+ + Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVA----WLFRPVDDLF 326 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG + + S LD+ + +V Q + I + Sbjct: 327 DTLTRPLGRTGGRWAADV-----KSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGF 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ LG +T RV +L + S+IW+P+G IG P +S +QP Q+LA+FP+N Sbjct: 382 GELGQAFVLGMVTFLRVALLTLACSVIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ N LLM GTQWYILFNVIAGAS P+D +E+ SF + W+ Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G+ Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++GV +M FV+A+NR W+PL R L Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAERRFAL 595 >gi|320457401|dbj|BAJ68022.1| ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 596 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 238/574 (41%), Positives = 344/574 (59%), Gaps = 11/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ ++ + + G+I +L I E P+ + ++ ++ LP YA R+ RML Sbjct: 33 RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQ--VSTNLADLPYYALRSVFRML 90 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTF+Y T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 91 VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + P +L+E +RS +L+ WQ+FW L VP +M L+ Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++TM+ V+ Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVTMVLVVL 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + F P+ + Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVA----WLFRPVGDLF 326 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG + + S LD+ + +V Q + I + Sbjct: 327 DTLTRPLGRTGGRWAADV-----KSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGF 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ LG +T RV +L ++ S IW+P+G IG P +S +QP Q+LA+FP+N Sbjct: 382 GELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ N LLM GTQWYILFNVIAGAS P+D +E+ SF + W+ Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G+ Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++GV +M FV+A+NR W+PL R L Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAERRFAL 595 >gi|313139598|ref|ZP_07801791.1| NitT/TauT family ABC transporter [Bifidobacterium bifidum NCIMB 41171] gi|313132108|gb|EFR49725.1| NitT/TauT family ABC transporter [Bifidobacterium bifidum NCIMB 41171] Length = 570 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 238/575 (41%), Positives = 349/575 (60%), Gaps = 13/575 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RRI ++ + + G++ LL I E P + ++ D+H LP YA R+ RM Sbjct: 8 RRIAADVVVAAGVLALFGVVAWLLPQINEPIGPSGVPST--VSDDLHLLPYYALRSVFRM 65 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A+ +SL+F+F+Y AA+ RRL MVL+P+LDI+QS+PILGFL+ TV +M L+PG ++ Sbjct: 66 FIALFLSLVFSFIYGLAAARCRRLRMVLIPLLDILQSVPILGFLSATVTIWMVLFPGSIL 125 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E A+IFAIFTSQ WNMTFS Y SL + P++L+E +RS +L+ WQ+FW L VP SM L Sbjct: 126 GVEAASIFAIFTSQAWNMTFSFYHSLLSEPQELDEAARSMQLTRWQRFWKLDVPNSMIPL 185 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN MMS+ GGWFF+ ASEMI V + LPG+GS++A+A + + L +L+A++TM+ V+ Sbjct: 186 LWNCMMSVGGGWFFLTASEMISVNNRTYALPGLGSFVAVASEHEQLGKVLWAIVTMVIVV 245 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 L D LL++P+ W+ KFR+ + + S VL + R++ + P+++ Sbjct: 246 LLIDVLLWKPLTAWAEKFRITQNESVQAKTSLVLSILRRSGISDALALVG----RPIADL 301 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + L R LG +P + LDI + ++ + W + +I + Sbjct: 302 MFWLTRPLGRTGARWPAAGTR-------RRTLDIAFMALMAVACLAGLWMLVRFISDGEG 354 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + +V + + LG IT RV +L ++ SIIW+P+G+ IG P IS QP Q+LA+FP+N Sbjct: 355 FAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRISRFAQPLVQVLASFPSNF 414 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V +H++ + LLM GTQWYILFNVIAGASA P+D +E +FH+ + Sbjct: 415 TFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAIPDDLREATRAFHLDTRQ 474 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 W +ILP +F + TG ITA GGAWNASIVSE+ ++GH L GLG YIA +T G Sbjct: 475 RWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLTANGLGTYIANATAVGDT 534 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + ++GV +M FV+ +NR W PL Y R + Sbjct: 535 GKTIIGVAVMSVFVVGVNRLFWRPLQAYAERRFSV 569 >gi|162147550|ref|YP_001602011.1| glycine betaine transport system permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545655|ref|YP_002277884.1| binding-protein-dependent transport systems inner membrane component [Gluconacetobacter diazotrophicus PAl 5] gi|161786127|emb|CAP55709.1| putative glycine betaine transport system permease protein [Gluconacetobacter diazotrophicus PAl 5] gi|209533332|gb|ACI53269.1| binding-protein-dependent transport systems inner membrane component [Gluconacetobacter diazotrophicus PAl 5] Length = 575 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 286/581 (49%), Positives = 380/581 (65%), Gaps = 12/581 (2%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 LP SR PN+FDL A + ++G+ +L + P + I LD LP YA Sbjct: 6 LPAPSSRPARPNVFDLAALLCIMGLAVVLGTAGRHMLAPISAPNAATIHLDPAWLPGYAV 65 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RTTLRM +A+ SL FTF YA AAKS R G+VLVP+LD++QS+PILGFLTFTVV+FM L Sbjct: 66 RTTLRMFAALGASLFFTFTYAVWAAKSPRAGLVLVPVLDVLQSVPILGFLTFTVVFFMGL 125 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 +PG+++GAELAAIF IFTSQ WNM FSMYQSL +P DL+EV+R F L+GWQKFW L VP Sbjct: 126 FPGRILGAELAAIFTIFTSQAWNMAFSMYQSLRAVPPDLDEVARCFGLTGWQKFWRLEVP 185 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 F++PGLVWN M+SMSGGWF VV SE I VG+T + LPGIGSY+ AI ++DL A+LYA++ Sbjct: 186 FAVPGLVWNAMISMSGGWFMVVYSETITVGNTNVLLPGIGSYVGTAIAQRDLWAVLYAIV 245 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 M+ VI YDQL+FRP++ WS +F G +D W+L L R+T LR I + + Sbjct: 246 AMMVVILAYDQLVFRPLVAWSGRFAATGIEGASASDPWLLVLLRRTALLRRITDAIGDGL 305 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 + + L + R L + + D+ W + ++ G AWQ Y Sbjct: 306 TAIGG--------LKLGRRPSDARRTPLVPD----RIRDVVWAVGLAMLSGGAAWQVWLY 353 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + + L+V+ LG +T+ RVV ++++AS+IW+P G+W+G P + + Q AQ +A Sbjct: 354 ARATISMAEFLHVVSLGGLTLARVVAMVLLASLIWVPAGVWLGLDPVRARRAQFIAQFMA 413 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFPAN+FFP+ V + ++HL+ ++WL+ LMI GTQWYILFNV+AGA+++P D EVA S Sbjct: 414 AFPANLFFPIFVLFIVHFHLSSDIWLTPLMILGTQWYILFNVVAGAASYPADLLEVARSL 473 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + G WW +ILPGI P+Y+TGAITA GGAWNA+I +EVASWG HL GLGAYIA + Sbjct: 474 QVGGRLWWLRVILPGIVPFYITGAITASGGAWNAAIAAEVASWGDDHLSAHGLGAYIAHA 533 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 T G V LG+ +M FVL NR +W PL Y R L Sbjct: 534 TVAGDTAHVGLGMTVMAAFVLLFNRAVWRPLAEYARRHFTL 574 >gi|296453563|ref|YP_003660706.1| binding-protein-dependent transporter inner membrane component [Bifidobacterium longum subsp. longum JDM301] gi|296182994|gb|ADG99875.1| binding-protein-dependent transport systems inner membrane component [Bifidobacterium longum subsp. longum JDM301] Length = 596 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 235/574 (40%), Positives = 341/574 (59%), Gaps = 11/574 (1%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ ++ + + G+I +L I E P+ + ++ ++ LP YA R+ RM Sbjct: 33 RLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQ--VSTNLADLPYYALRSVFRMF 90 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ SL+FTF+Y T AA+ RRL VL+P+LDI+QS+PILGFL+ T+ +M L+PG ++G Sbjct: 91 VALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLG 150 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+IFAIFTSQ WNM FS +SL + P +L+E +RS +L+ WQ+FW L VP +M L+ Sbjct: 151 VEAASIFAIFTSQAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLL 210 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN MMS+ GGWFF+ ASEMI V + LPGIGS++A A E++L AI +A++ M+ V+ Sbjct: 211 WNCMMSVGGGWFFLTASEMISVNNRTYALPGIGSFVAQAAAEENLAAICWAIVMMVLVVL 270 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L D LL++P+ W+ KFR+ ++ S VL + R+++ + F P+ + Sbjct: 271 LIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVA----WLFRPVGDLF 326 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R LG + + S LD + +V Q + I + Sbjct: 327 DTLTRPLGRTGGRWAADV-----KSARSRALDAVFTVLVLAACAFGLVQLMLVIHRDAGF 381 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ LG +T RV +L ++ S+IW+P+G IG P +S +QP Q+LA+FP+N Sbjct: 382 GELGQAFVLGMVTFLRVALLTLVCSVIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFT 441 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP V ++ N LLM GTQWYILFNVIAGAS P+D +E+ SF + W+ Sbjct: 442 FPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQR 501 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 WR +ILP +F +VTG ITA GGAWNASIVSE+ S+G L +GLGAYIAE+TE G+ Sbjct: 502 WRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTV 561 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++GV +M FV+A+NR W+PL L Sbjct: 562 RTIIGVTVMSVFVVAVNRLFWNPLQRMAEHRFAL 595 >gi|86607766|ref|YP_476528.1| taurine ABC transporter permease protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556308|gb|ABD01265.1| NitT/TauT family ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 575 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 246/576 (42%), Positives = 346/576 (60%), Gaps = 12/576 (2%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLR 71 RR+ D + + ++ ++ +VP I LD +LP YA+R+TLR Sbjct: 11 RRLPAGAADGAIILGTLVLLALVAQVGVGAFERFQPPAVVPRIDLDPRNLPYYAARSTLR 70 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M A+ S LFT +Y +AAKSR +L+P+LD++QS+P+LGFL+ TV F+ L+PG + Sbjct: 71 MFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDVLQSVPVLGFLSITVTGFIALFPGSL 130 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G E A+IFAIFTSQVWNMTFS YQSL +P++L E + +RLSGWQ+F L VP +M G Sbjct: 131 LGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAATLYRLSGWQRFTQLEVPAAMVG 190 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 L+WN MMS GGWFFV ASE I V + LPG+GSY+ A++ +DL + +A+LTM GV Sbjct: 191 LIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKLGWALLTMAGV 250 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I L DQL +RP++ WS+KFRLE+++G +SW+ L R IG ++ SPL+ Sbjct: 251 ILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLLTTARIPRLIG----SWLSPLAE 306 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 V +L L + P L + +R +L + G+ I I + ++ Sbjct: 307 LVDRLLSYLTRPHWVDP---LSPEAERRRERLLTQLSRAAIGGIGIWIVY----FVATTV 359 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + +V+ LG +T+ RV VL++ A++IW P+G+ IGF P ++ +QP Q LAAFPAN Sbjct: 360 GFGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNPKLAKLLQPVVQFLAAFPAN 419 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 FP ++ LLM G QWYILFN IAGA + P D +E+A + GW Sbjct: 420 FLFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGW 479 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + WR +I+PGIF +VTG +TA GGAWNASIVSE+ +WG L TGLG YIAE+T G Sbjct: 480 QRWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAWGSTTLTATGLGTYIAEATAVGD 539 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +P + LG+ +M FV+ +NR W LY L Sbjct: 540 WPRITLGIGMMSLFVVGINRLFWRRLYQLAEEKYHL 575 >gi|302527762|ref|ZP_07280104.1| binding-protein-dependent transport system inner membrane component [Streptomyces sp. AA4] gi|302436657|gb|EFL08473.1| binding-protein-dependent transport system inner membrane component [Streptomyces sp. AA4] Length = 577 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 237/576 (41%), Positives = 334/576 (57%), Gaps = 13/576 (2%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 RR ++ L + +I L HG P ++ D LP YA R+ LR Sbjct: 14 PRRTIADVAVFLGAAAALWLIVRLAHGAATAWTPATAPST--VSTDPAELPYYAGRSLLR 71 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M A+V+S+ FTF YAT AA+ RR +L+P LDI+QS+P+LGFL+ T+ F+ L+PG Sbjct: 72 MFVALVLSVGFTFCYATAAARLRRTEKILLPALDILQSVPVLGFLSVTITGFIALFPGSQ 131 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G E A+IFAIFTSQ WNMTF+ + SL + PRDL+E SR RLS WQ+FW + VP M Sbjct: 132 LGLECASIFAIFTSQAWNMTFAFHHSLVSQPRDLDEASRLLRLSRWQRFWRVDVPSGMIP 191 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 LVWN MMS GGWFF+ ASE + V + LPGIG+Y+A A +E DL +L A+ M+ + Sbjct: 192 LVWNGMMSFGGGWFFLTASEALSVNNQKFALPGIGAYVATASEEGDLGKVLLAVGVMVVL 251 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 + + L +RP+ WS +FR+E + S VL L R++ +G PL Sbjct: 252 VVGVNVLFWRPLTAWSERFRIENSEAAEAPRSLVLDLLRRSRIPTLLGRVLGKLVFPLDR 311 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + +RF DI + VV G+ + + + +I Sbjct: 312 ALAVFGLAEYPLRFSPARR-----------RAADIVFSVVVFGLILYGTVRMVLFIGETT 360 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 Y ++ +V+ LG IT RVV L+++ +++W+PVG+WIG P +S QP Q+LA+FPAN Sbjct: 361 GYGEIGHVLLLGLITFARVVALVVVGTLVWVPVGVWIGMNPRVSRLAQPVVQVLASFPAN 420 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 FPL+ + + ++ + LLM G QWYILFNVIAGASA P+D +E +++ + Sbjct: 421 FLFPLITAVLLATGISLDWGGILLMSLGAQWYILFNVIAGASAIPHDLREASANLRLPRA 480 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 WWR ++LP +FP YVTG ITA GGAWNASIV+E+ S+ + L TGLGAYIA++T G Sbjct: 481 LWWRRLVLPAVFPSYVTGGITAAGGAWNASIVAEIVSYHGVTLTATGLGAYIADATSTGD 540 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++LGV +M +V+ LNR W LY R L Sbjct: 541 SGRILLGVAVMSLYVVGLNRLFWRRLYRLAERRFSL 576 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 14/266 (5%) Query: 4 YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63 Y + RR +F ++ F L++ ++ I ETT +I ++ + L Sbjct: 321 YPLRFSPARRRAADIVFSVVVFGLILYGTVRMVLFIGETTGYGEIGHVLLLGLI------ 374 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 T R+++ +V+ L + R+ + P++ ++ S P Sbjct: 375 ----TFARVVALVVVGTLVWVPVGVWIGMNPRVSRLAQPVVQVLASFPANFLFPLITAVL 430 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + G I + W + F++ IP DL E S + RL + L Sbjct: 431 LATGISLDWGG----ILLMSLGAQWYILFNVIAGASAIPHDLREASANLRLPRALWWRRL 486 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P P V + + G W + +E++ + G+G+YIA A D IL Sbjct: 487 VLPAVFPSYVTGGITAAGGAWNASIVAEIVSYHGVTLTATGLGAYIADATSTGDSGRILL 546 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNK 269 + M + ++L +R + + + Sbjct: 547 GVAVMSLYVVGLNRLFWRRLYRLAER 572 >gi|317016935|gb|ADU86008.1| putative binding-protein-dependent transport systems inner membrane component [Dactylosporangium aurantiacum subsp. hamdenensis] Length = 584 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 219/582 (37%), Positives = 323/582 (55%), Gaps = 15/582 (2%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 LP ++ + + A +++ ++ + G + P+ I + LP YA Sbjct: 17 RLPWLRTQFGWVDWVVAAAVLVLFYLVFRIAEGTTVSFTPQHPA----IDTNPARLPYYA 72 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 R+ LRM A+ +S +FTF YA AA+SRRL +L+P LDI+QS+P+L FLT + + Sbjct: 73 GRSLLRMFVALGVSTVFTFGYAYAAARSRRLEKILIPALDILQSVPVLAFLTVAIGALLA 132 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L+P IG ELA+IFAIFTSQ WNMTFS Y SL +PRDL+E+SRS RL+ W +FW + V Sbjct: 133 LFPHSFIGLELASIFAIFTSQAWNMTFSFYHSLITLPRDLDELSRSLRLTRWMRFWKIEV 192 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P GL+WN MMS GGWFF+VASE + V + LPG+G+Y AI + +L + A+ Sbjct: 193 PNGAIGLIWNGMMSFGGGWFFLVASEAVTVANAQYTLPGVGAYAGAAIAQGNLGHVFLAI 252 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 M ++ + +RPM W+ KF+ E++ S VL R++++ + + + Sbjct: 253 AAMAVMVIGVNFFFWRPMTAWAEKFKQEQSEATEVQRSVVLDFLRRSHWPQALAPAR--- 309 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 L+ + R G P + + + D+ + + + + Sbjct: 310 -RKLAGWSARAGRVFGTDDRPLPVSHARRLA-------GDVVFAAATIALIGWGLYSLLR 361 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y+ V + LG +T RV+VL+++ +++W+P+G+ IG P ++ QP Q+L Sbjct: 362 YLHGTAGLGVVAEPLLLGLLTPGRVIVLVVLTTLVWVPIGVRIGSSPRLARIAQPIVQIL 421 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 A+FPAN FPL L+ ++ LLM G QWYILFN IAGA A P D +E + Sbjct: 422 ASFPANFLFPLATWLFVRTGLSIDIGGILLMGLGAQWYILFNTIAGAMAIPTDLREAMDN 481 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + GWR WR +I+P IFPYYVTG ITA GGAWNASIV+EV + L GLGAYIA+ Sbjct: 482 LGVHGWRRWRRLIIPAIFPYYVTGGITASGGAWNASIVAEVVGFAGTTLTAHGLGAYIAD 541 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ST G++P ++ G+ +M +V+ LNR W LY L Sbjct: 542 STATGNYPHLIAGIAVMSLYVVGLNRLFWRRLYRLAEARYSL 583 >gi|167626908|ref|YP_001677408.1| anion ABC transporter permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596909|gb|ABZ86907.1| ABC-type anion transport system, duplicated permease component [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 601 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 236/562 (41%), Positives = 323/562 (57%), Gaps = 12/562 (2%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + T + ++LD+ LP Y + T +RM + ISLL TF + LAAKS+R Sbjct: 40 LGGSIDYTSQSSVQQYSEVSLDLWLLPYYTAETVMRMFIGLGISLLITFTFGALAAKSKR 99 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P +DI+QSIPILGF TV F+ L+P + GA+ A IF I T+Q WNM S Y Sbjct: 100 AESIIIPAVDILQSIPILGFFAITVTGFLVLFPSSLWGAQSAVIFGIITAQAWNMILSFY 159 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQ+FW + VPFSMPGLVWN MMSMS WF +VASE I+V Sbjct: 160 QSLKTVPKELVEAADMYQLSAWQRFWKVEVPFSMPGLVWNTMMSMSACWFMIVASETIIV 219 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A QD A+ A++ ML I LYDQLLFRP++VWS KF Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQDFRAVGAAIMMMLVTIILYDQLLFRPLVVWSEKF 279 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 L + SW L + +K+ + + S L N + + ++ P + Sbjct: 280 VLGENQSEVYSKSWFLKILQKSAITKLFSSIFGSISSALVNI--RFFKKNLNKVYNQPRH 337 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 Q + +L + ++ A+Q++ + + V G +T FRV Sbjct: 338 RKQEKQETLLQKILWTVFTLMIVVGLFYFAYQAVYGGNSDIGLSETFKVFGYGLLTGFRV 397 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VVLI I SIIW+P+G+W+G RP I+ K+QP+AQ+ AAFP NV + + + V LN N+ Sbjct: 398 VVLIFITSIIWVPIGVWVGMRPRIAQKVQPYAQMAAAFPVNVLYGIFGTLVITLGLNFNI 457 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P++ K A + + G+ WR + P + PYYVTGA Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPDELKLAAKNMQLKGFMKWRKYLFPAVMPYYVTGA 517 Query: 511 ITACGGAWNASIVSEVASWG---HIHLRTTGLGAYIAESTEKG--SFPEVVLGVLIMCCF 565 ITA GGAWNASIV E +WG ++ +GLG YI T V+LGV++MC Sbjct: 518 ITAAGGAWNASIVCEYINWGTGDQSIIQASGLGDYITYYTNLQGDHTANVLLGVIVMCVL 577 Query: 566 VLALNRFLWHPLYLYGTRCLRL 587 V+A N+ W LY Y + Sbjct: 578 VVASNKLFWRRLYNYAENRFSM 599 >gi|254375266|ref|ZP_04990746.1| ABC-type anion transport system [Francisella novicida GA99-3548] gi|151572984|gb|EDN38638.1| ABC-type anion transport system [Francisella novicida GA99-3548] Length = 599 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 230/599 (38%), Positives = 340/599 (56%), Gaps = 16/599 (2%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD------IVDIVPITL 56 + + +S ++ +D+LA +++ I+++ + + D ++ I+L Sbjct: 1 MKRLYSTNMSAKVSRTKWDILALSIILLILSVFVWSTSDLGGSIDYKSQASVLKYSDISL 60 Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+LGF Sbjct: 61 SLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVLGFF 120 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++LS Sbjct: 121 AITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSA 180 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPGIGSYIAL 231 WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V I LPGIGS+I Sbjct: 181 WQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSFIDA 240 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + +K Sbjct: 241 ANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQK 300 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ S + N K + ++ + +L + Sbjct: 301 AYVVKIFTTFLAKCSSKIVNI--KFFKKNLDKAYNQKVHKKADKHESVTKRILWNVIIIL 358 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + +Q++ ++ V G T RV VLI+I S+IW+P+GIWIG R Sbjct: 359 MILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILITSLIWVPIGIWIGLR 418 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM GTQWYILFNVIAG Sbjct: 419 PKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAG 478 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 ASA P + K A + + G + ++P + PYYVTGAITA GG+WNASI+SE +WG Sbjct: 479 ASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGK 538 Query: 532 IH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++ +G+G YI + T V+LGV++MC V+A N+ W LY Y + Sbjct: 539 DSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAENRFSM 597 >gi|134302641|ref|YP_001122610.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134050418|gb|ABO47489.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 599 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + ++ I+L + LP Y + TT+RM +VISLL TF++ T AAK++R Sbjct: 40 LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 99 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P++DI+QSIP+LGF TV F+ ++P + GA+ A IF I T+Q WNM S Y Sbjct: 100 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 159 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V Sbjct: 160 QSLKTVPKELREAADMYQLSSWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 219 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A Q+ A+ A++TML I LYDQLLFRP++ WS KF Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 279 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 + + SW L + +K ++ + + N K + ++ + Sbjct: 280 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 337 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +L ++ + +Q++ ++ V G T RV Sbjct: 338 RKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 397 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+ Sbjct: 398 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 457 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGA Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 517 Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567 ITA GG+WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+ Sbjct: 518 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 577 Query: 568 ALNRFLWHPLYLYGTRCLRL 587 A N+ W LY Y + Sbjct: 578 ASNKLFWRRLYNYAENRFSM 597 >gi|254372120|ref|ZP_04987613.1| hypothetical protein FTCG_01262 [Francisella tularensis subsp. novicida GA99-3549] gi|151569851|gb|EDN35505.1| hypothetical protein FTCG_01262 [Francisella novicida GA99-3549] Length = 599 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 229/599 (38%), Positives = 340/599 (56%), Gaps = 16/599 (2%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD------IVDIVPITL 56 + + +S ++ +D+LA +++ I+++ + + D ++ I+L Sbjct: 1 MKRLYSTNMSAKVSRTKWDILALSIILLILSVFVWSTSDLGGSIDYKSQASVLKYSDISL 60 Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+LGF Sbjct: 61 SLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVLGFF 120 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++LS Sbjct: 121 AITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSA 180 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPGIGSYIAL 231 WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V I LPGIGS+I Sbjct: 181 WQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSFIDA 240 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + +K Sbjct: 241 ANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQK 300 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + + N K + ++ + +L + Sbjct: 301 AYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVHKKADKHESVTKRILWNVIIIL 358 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + +Q++ ++ V G T RV VLI+I S+IW+P+GIWIG R Sbjct: 359 MILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILITSLIWVPIGIWIGLR 418 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM GTQWYILFNVIAG Sbjct: 419 PKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAG 478 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 ASA P + K A + + G + ++P + PYYVTGAITA GG+WNASI+SE +WG Sbjct: 479 ASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGK 538 Query: 532 IH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++ +G+G YI + T V+LGV++MC V+A N+ W LY Y + Sbjct: 539 DSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAENRFSM 597 >gi|56707421|ref|YP_169317.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669892|ref|YP_666449.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|224456498|ref|ZP_03664971.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370883|ref|ZP_04986888.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254874257|ref|ZP_05246967.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|56603913|emb|CAG44898.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320225|emb|CAL08281.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151569126|gb|EDN34780.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254840256|gb|EET18692.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|282158563|gb|ADA77954.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis NE061598] Length = 599 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + ++ I+L + LP Y + TT+RM +VISLL TF++ T AAK++R Sbjct: 40 LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 99 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P++DI+QSIP+LGF TV F+ ++P + GA+ A IF I T+Q WNM S Y Sbjct: 100 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 159 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V Sbjct: 160 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 219 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A Q+ A+ A++TML I LYDQLLFRP++ WS KF Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 279 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 + + SW L + +K ++ + + N K + ++ + Sbjct: 280 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 337 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +L ++ + +Q++ ++ V G T RV Sbjct: 338 RKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 397 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+ Sbjct: 398 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 457 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGA Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 517 Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567 ITA GG+WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+ Sbjct: 518 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 577 Query: 568 ALNRFLWHPLYLYGTRCLRL 587 A N+ W LY Y + Sbjct: 578 ASNKLFWRRLYNYAENRFSM 597 >gi|255524913|ref|ZP_05391861.1| binding-protein-dependent transport systems inner membrane component [Clostridium carboxidivorans P7] gi|255511391|gb|EET87683.1| binding-protein-dependent transport systems inner membrane component [Clostridium carboxidivorans P7] Length = 574 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 206/572 (36%), Positives = 330/572 (57%), Gaps = 14/572 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 + D++ F++++ I+ + + + V + ++ D+ +LP Y ++ RM +A + Sbjct: 13 GVLDIIIFLVIVSILYLAIAPGIKGNV---NTSGIQVSTDIRNLPIYVLKSVGRMTAAYI 69 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +SL+FT +Y +AA + + V++PILDI+QSIP+L FL V+ + L+P IG EL+ Sbjct: 70 LSLIFTLIYGYIAAHNEKAEKVMMPILDILQSIPVLSFLPAVVLGLIALFPSHNIGLELS 129 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +I IFT Q WNMTFS Y S+ +P+DLEE S F L+ WQKF L VPF++ GLVWN M Sbjct: 130 SIILIFTGQAWNMTFSFYHSIKILPKDLEEASGVFGLNKWQKFKRLEVPFAVIGLVWNSM 189 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MS SGGWFF++A EM + L GIGS++ A + D A+ + ++ VI L DQ Sbjct: 190 MSWSGGWFFLMACEMFTLKGKDFRLEGIGSFLQTAASQGDKKALACGIAALIFVIVLLDQ 249 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L+++P+ VW++KF++E T S+VL L R++ + F+ + P++ N+ Sbjct: 250 LVWKPVTVWADKFKMELTESGEAPHSFVLTLLRRSVIVDFL---VKKIYEPIAENL---- 302 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC--VVCGVAIGIAWQSIGYIVNHFTYQD 375 + RF + + + + W ++ GV + + + ++ + + Sbjct: 303 -NEAIDRFVVKLASKEKTKEKGIGIGFIVRWIVRILIYGVLLYSGFNAFKLLMQ-LSKNE 360 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ + RV +IA I +PVG+ IG +++ +QP Q++A+ PA FP Sbjct: 361 WGRILPSVGYSFLRVAAAQVIALIWTVPVGVAIGMNKKVANVLQPIIQVVASIPATALFP 420 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 +++ N+ +LM+ GTQWYILFNVIAGA A P D K A +F I GW+ W+ Sbjct: 421 VILIYFMNKLGGLNIASVILMLMGTQWYILFNVIAGAMAIPEDLKAAAKTFGINGWKRWK 480 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 +ILP IFPY +TG +TA GG WNASIVSE ++G + T GLGA I+E+TEKG++P + Sbjct: 481 VLILPSIFPYLLTGMVTATGGCWNASIVSEYVNFGGRTVSTVGLGALISEATEKGNYPLL 540 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++ +IMC V+ +N+ LW LY+ ++ Sbjct: 541 LIATIIMCVVVVGVNKTLWKRLYVLSEEKFKI 572 >gi|299135927|ref|ZP_07029111.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] gi|298602051|gb|EFI58205.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] Length = 590 Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 232/568 (40%), Positives = 340/568 (59%), Gaps = 14/568 (2%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVIS 79 D+ + + ++ + E+ V D++P I+LD +LP YA+R+TLRM A+ S Sbjct: 35 DIAVGLGTLVLLYVAARVGAESLVKFSPPDVIPTISLDPRNLPNYAARSTLRMFIALGFS 94 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 LFTFVY AA+SRR VL+P+LDI+QS+P+LGFL+ TV F+ ++ G ++G E A+I Sbjct: 95 TLFTFVYGYAAARSRRAEKVLIPLLDILQSVPVLGFLSVTVTLFIAMFRGSLLGLEAASI 154 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 FAIFT Q WNM FS YQSL +P +++E+ + LS W++F L +P S+ GLVWN MMS Sbjct: 155 FAIFTGQAWNMAFSFYQSLRTVPAEMDEMVTLYGLSKWERFTRLELPSSVIGLVWNGMMS 214 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GGWFF+ ASE I V + LPG+GSY+A AI +DL A+ +A++TM+ ++ L DQ Sbjct: 215 FGGGWFFLAASESISVLNRQYTLPGLGSYVASAIAARDLHAVAWAVVTMIILVLLIDQFF 274 Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319 ++P++ +++++LE + G WV+ L+R + L L R Sbjct: 275 WKPLVTIADRYKLELSAGEE-RRFWVVDLWRAASLPALFECILGPSLIRLDRLFSNLTRV 333 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 P S D + VV +A+G+ ++ +I++ +V + Sbjct: 334 KPHPGHTSP------------SKTADRVFNVVVSLLALGMIVAAVRFILSSVGMAEVGHA 381 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 LG T RV+ L++++++IW P+G+ IGF P ++ QP Q+ A+FPAN FP Sbjct: 382 ALLGLATGARVLALLVLSTLIWTPIGVAIGFNPRLARLSQPLVQICASFPANFLFPFATL 441 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 ++ N LLM G QWY+LFNVI GA + PND +E+A+S + G+R W+++I Sbjct: 442 IFIRLGIHLNWGSMLLMALGAQWYLLFNVIGGAQSVPNDLREMATSIGLRGFRKWKFLIG 501 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P IF +VTGAITA GGAWNASIV+E+ SWGH LR GLGAYIA++T G +P +VLGV Sbjct: 502 PSIFGSWVTGAITASGGAWNASIVAEIVSWGHTTLRAAGLGAYIADATSVGDWPRIVLGV 561 Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+ LNR LW PLY +L Sbjct: 562 SLMSVFVVTLNRILWKPLYRLAQTRFQL 589 >gi|89255582|ref|YP_512943.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314089|ref|YP_762812.1| ABC transporter ATP-binding protein [Francisella tularensis subsp. holarctica OSU18] gi|169656490|ref|YP_001427591.2| ABC transporter membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254366983|ref|ZP_04983019.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|254368580|ref|ZP_04984596.1| hypothetical protein FTAG_01566 [Francisella tularensis subsp. holarctica FSC022] gi|290954416|ref|ZP_06559037.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|295312158|ref|ZP_06802964.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|89143413|emb|CAJ78586.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115128988|gb|ABI82175.1| ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134252809|gb|EBA51903.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|157121483|gb|EDO65674.1| hypothetical protein FTAG_01566 [Francisella tularensis subsp. holarctica FSC022] gi|164551558|gb|ABU60635.2| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 599 Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 231/599 (38%), Positives = 341/599 (56%), Gaps = 16/599 (2%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRD------IVDIVPITL 56 + + +S ++ +D+LA +++ I++I + I + D ++ I+L Sbjct: 1 MKRLYSTNMSAKVSRTKWDILALSIILLILSIFVWSISDLGGSIDYKSQASVLKYSDISL 60 Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + LP Y + TT+RM +VISLL TF++ T AAK++R +++P++DI+QSIP+LGF Sbjct: 61 SLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKRAESIIIPLVDILQSIPVLGFF 120 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 TV F+ ++P + GA+ A IF I T+Q WNM S YQSL +P++L E + ++LS Sbjct: 121 AITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSA 180 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPGIGSYIAL 231 WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V I LPGIGS+I Sbjct: 181 WQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLPGIGSFIDA 240 Query: 232 AIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 A Q+ A+ A++TML I LYDQLLFRP++ WS KF + + SW L + +K Sbjct: 241 ANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQK 300 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + + N K + ++ + +L + Sbjct: 301 AYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVHRKADKHESVTKRILWNVIIIL 358 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + +Q++ ++ V G T RV VLI+I S+IW+P+GIWIG R Sbjct: 359 MILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRVAVLILITSLIWVPIGIWIGLR 418 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P I+ K+QP+AQ+ AAFP NV + + + V ++LN N+W LLM GTQWYILFNVIAG Sbjct: 419 PKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAG 478 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 ASA P + K A + + G + ++P + PYYVTGAITA GG+WNASI+SE +WG Sbjct: 479 ASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGK 538 Query: 532 IH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++ +G+G YI + T V+LGV++MC V+A N+ W LY Y + Sbjct: 539 DSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAENRFSM 597 >gi|208779974|ref|ZP_03247317.1| ABC transporter, membrane protein [Francisella novicida FTG] gi|208743978|gb|EDZ90279.1| ABC transporter, membrane protein [Francisella novicida FTG] Length = 591 Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 323/560 (57%), Gaps = 10/560 (1%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + ++ I+L++ LP Y + TT+RM +VISLL TF++ T AAK++R Sbjct: 32 LGGSIDYKSQASVLKYSDISLNLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 91 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P++DI+QSIP+LGF TV F+ ++P + GA+ A IF I T+Q WNM S Y Sbjct: 92 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 151 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V Sbjct: 152 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 211 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A Q+ A+ A++TML I LYDQLLFRP++ WS KF Sbjct: 212 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 271 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 + + SW L + +K ++ + + N K + ++ + Sbjct: 272 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 329 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +L ++ + +Q++ ++ V G T RV Sbjct: 330 KKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 389 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+ Sbjct: 390 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 449 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGA Sbjct: 450 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 509 Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567 ITA GG+WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+ Sbjct: 510 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 569 Query: 568 ALNRFLWHPLYLYGTRCLRL 587 A N+ W LY Y + Sbjct: 570 ASNKLFWRRLYNYAENRFSM 589 >gi|118496755|ref|YP_897805.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. novicida U112] gi|118422661|gb|ABK89051.1| ABC-type anion transport system, duplicated permease component [Francisella novicida U112] Length = 599 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + ++ I+L + LP Y + TT+RM +VISLL TF++ T AAK++R Sbjct: 40 LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 99 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P++DI+QSIP+LGF TV F+ ++P + GA+ A IF I T+Q WNM S Y Sbjct: 100 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 159 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V Sbjct: 160 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 219 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A Q+ A+ A++TML I LYDQLLFRP++ WS KF Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 279 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 + + SW L + +K ++ + + N K + ++ + Sbjct: 280 VIGDNPSETYSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 337 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +L ++ + +Q++ ++ V G T RV Sbjct: 338 KKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 397 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+ Sbjct: 398 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 457 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGA Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 517 Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567 ITA GG+WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+ Sbjct: 518 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 577 Query: 568 ALNRFLWHPLYLYGTRCLRL 587 A N+ W LY Y + Sbjct: 578 ASNKLFWRRLYNYAENRFSM 597 >gi|187932197|ref|YP_001892182.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. mediasiatica FSC147] gi|187713106|gb|ACD31403.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. mediasiatica FSC147] Length = 599 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 321/560 (57%), Gaps = 10/560 (1%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + ++ I+L + LP Y + TT+RM +VISLL TF++ T AAK++R Sbjct: 40 LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 99 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P++DI+QSIP+LGF TV F+ ++P + GA+ A IF I T+Q WNM S Y Sbjct: 100 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 159 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V Sbjct: 160 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 219 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A Q+ A+ A++TML I LYDQLLFRP++ WS KF Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 279 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 + + SW L + +K ++ + + N K + ++ + Sbjct: 280 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 337 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +L ++ + +Q + ++ V G T RV Sbjct: 338 RKADKHESVTKRILWNVIIILMILALLYFVYQIVYAKDKDIGIEETFKVFVYGLFTGVRV 397 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+ Sbjct: 398 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 457 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGA Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 517 Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567 ITA GG+WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+ Sbjct: 518 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 577 Query: 568 ALNRFLWHPLYLYGTRCLRL 587 A N+ W LY Y + Sbjct: 578 ASNKLFWRRLYNYAENRFSM 597 >gi|241667484|ref|ZP_04755062.1| ABC-type anion transport system, duplicated permease component [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876031|ref|ZP_05248741.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842052|gb|EET20466.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 601 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 235/562 (41%), Positives = 324/562 (57%), Gaps = 12/562 (2%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + T + ++L++ LP Y + T +RM + ISLL TF++ LAAKS+R Sbjct: 40 LGGSIDYTNQASVQQYSEVSLNLWLLPYYTAETVMRMFIGLGISLLITFIFGALAAKSKR 99 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P +DI+QSIPILGF TV F+ L+P + GA+ A IF I T+Q WNM S Y Sbjct: 100 AESIIIPAVDILQSIPILGFFAITVTGFLVLFPSSLWGAQSAVIFGIITAQAWNMILSFY 159 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQ+FW + VPFSMPGLVWN MMSMS WF +VASE I+V Sbjct: 160 QSLKTVPKELVEAADMYQLSAWQRFWKVEVPFSMPGLVWNTMMSMSACWFMIVASETIIV 219 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A QD A+ A++ ML I LYDQLLFRP++VWS KF Sbjct: 220 NFSASQSIPINLPGIGSFIDAANNAQDFRAVGAAIMMMLVTIILYDQLLFRPLVVWSEKF 279 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 L + SW L + +K+ + + S L N + + ++ P + Sbjct: 280 VLGENQSEVYSKSWFLKILQKSAITKLFSSIFGSISSALVNI--RFFKKNLNKVYNQPRH 337 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 Q + +L + ++ A+Q++ + + V G +T FRV Sbjct: 338 RKQEKQETLLQKILWTVFTLMIVVGLFYFAYQAVYGGNSDIGLSETFKVFGYGLLTGFRV 397 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VVLI I SIIW+P+G+W+G RP I+ K+QP+AQ+ AAFP NV + + + V LN N+ Sbjct: 398 VVLIFITSIIWVPIGVWVGMRPRIAQKVQPYAQMAAAFPVNVLYGIFGTLVITLGLNFNI 457 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P++ K A + + G+ WR + P + PYYVTGA Sbjct: 458 WCILLMALGTQWYILFNVIAGASAIPDELKLAAKNMQLKGFMKWRKYLFPAVMPYYVTGA 517 Query: 511 ITACGGAWNASIVSEVASWG---HIHLRTTGLGAYIAESTEKG--SFPEVVLGVLIMCCF 565 ITA GGAWNASIV E +WG ++ +GLG YI T V+LGV++MC Sbjct: 518 ITAAGGAWNASIVCEYINWGTGDQSIIQASGLGDYITYYTNLQGDHTANVLLGVIVMCVL 577 Query: 566 VLALNRFLWHPLYLYGTRCLRL 587 V+A N+ W LY Y + Sbjct: 578 VVASNKLFWRRLYNYAENRFSM 599 >gi|328675308|gb|AEB27983.1| ABC-type anion transport system, duplicated permease component [Francisella cf. novicida 3523] Length = 591 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 225/562 (40%), Positives = 325/562 (57%), Gaps = 14/562 (2%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + ++ I+L + LP Y + TT+RM + ISLL TF++ T AAK++R Sbjct: 32 LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLFISLLITFIFGTWAAKNKR 91 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P++DI+QSIP+LGF TV F+ ++P + GA+ A IF I T+Q WNM S Y Sbjct: 92 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 151 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V Sbjct: 152 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 211 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A Q+ A+ A++TML I LYDQLLFRP++ WS KF Sbjct: 212 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIVLYDQLLFRPLVAWSEKF 271 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 + + SW L + +K ++ F++ SNN+ + + + + Sbjct: 272 VIGDNPSETYSKSWFLTILQKAYVVKIFT----RFWTKCSNNIVNINFFKKNLDKAYNQK 327 Query: 331 FLQLCSNQ--RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 + + +L ++ + +Q++ ++ V G T Sbjct: 328 VHKKAEKHESTIKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGV 387 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV LI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN Sbjct: 388 RVAALILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNF 447 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++W LLM GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVT Sbjct: 448 DIWCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVT 507 Query: 509 GAITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCF 565 GAITA GG+WNASI+SE +WG ++ +G+G YI + T V+LGV++MC Sbjct: 508 GAITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCIL 567 Query: 566 VLALNRFLWHPLYLYGTRCLRL 587 V+A NR W LY Y + Sbjct: 568 VVASNRLFWRRLYNYAENRFSM 589 >gi|167010348|ref|ZP_02275279.1| ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica FSC200] Length = 591 Score = 452 bits (1162), Expect = e-124, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + ++ I+L + LP Y + TT+RM +VISLL TF++ T AAK++R Sbjct: 32 LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 91 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P++DI+QSIP+LGF TV F+ ++P + GA+ A IF I T+Q WNM S Y Sbjct: 92 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 151 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V Sbjct: 152 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 211 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A Q+ A+ A++TML I LYDQLLFRP++ WS KF Sbjct: 212 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 271 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 + + SW L + +K ++ + + N K + ++ + Sbjct: 272 VIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 329 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +L ++ + +Q++ ++ V G T RV Sbjct: 330 RKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 389 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+ Sbjct: 390 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 449 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGA Sbjct: 450 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 509 Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567 ITA GG+WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+ Sbjct: 510 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 569 Query: 568 ALNRFLWHPLYLYGTRCLRL 587 A N+ W LY Y + Sbjct: 570 ASNKLFWRRLYNYAENRFSM 589 >gi|194324063|ref|ZP_03057838.1| ABC transporter, membrane protein [Francisella tularensis subsp. novicida FTE] gi|194321960|gb|EDX19443.1| ABC transporter, membrane protein [Francisella tularensis subsp. novicida FTE] Length = 591 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 322/560 (57%), Gaps = 10/560 (1%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L G + ++ I+L + LP Y + TT+RM +VISLL TF++ T AAK++R Sbjct: 32 LGGSIDYKSQASVLKYSDISLSLWLLPYYTAETTIRMFIGLVISLLITFIFGTWAAKNKR 91 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +++P++DI+QSIP+LGF TV F+ ++P + GA+ A IF I T+Q WNM S Y Sbjct: 92 AESIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSLWGAQAAVIFGIITAQAWNMILSFY 151 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 QSL +P++L E + ++LS WQKFW L VPF+MPGLVWN MMSMSG WF +VASE I+V Sbjct: 152 QSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPGLVWNTMMSMSGSWFMIVASETIMV 211 Query: 216 G-----DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I LPGIGS+I A Q+ A+ A++TML I LYDQLLFRP++ WS KF Sbjct: 212 NFSASQSIPINLPGIGSFIDAANNAQNFTAVGAAIVTMLVTIILYDQLLFRPLVSWSEKF 271 Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 + + SW L + +K ++ + + N K + ++ + Sbjct: 272 VIGDNPSETYSKSWFLTILQKAYVVKIFTTFLAKCSNKIVNI--KFFKKNLDKAYNQKVH 329 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +L ++ + +Q++ ++ V G T RV Sbjct: 330 KKADKHESVTKRILWNVIIILMILALLYFVYQTVYAKDKDIGIEETFKVFVYGLFTGVRV 389 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 VLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ AAFP NV + + + V ++LN N+ Sbjct: 390 AVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGVFGTLVVMFNLNFNI 449 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 W LLM GTQWYILFNVIAGASA P + K A + + G + ++P + PYYVTGA Sbjct: 450 WCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKFLVPAVMPYYVTGA 509 Query: 511 ITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAESTEK--GSFPEVVLGVLIMCCFVL 567 ITA GG+WNASI+SE +WG ++ +G+G YI + T V+LGV++MC V+ Sbjct: 510 ITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSNVLLGVIVMCILVV 569 Query: 568 ALNRFLWHPLYLYGTRCLRL 587 A N+ W LY Y + Sbjct: 570 ASNKLFWRRLYNYAENRFSM 589 >gi|118496766|ref|YP_897816.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. novicida U112] gi|194324074|ref|ZP_03057849.1| ABC transporter, permease protein [Francisella tularensis subsp. novicida FTE] gi|118422672|gb|ABK89062.1| ABC-type anion transport system, duplicated permease component [Francisella novicida U112] gi|194321971|gb|EDX19454.1| ABC transporter, permease protein [Francisella tularensis subsp. novicida FTE] Length = 574 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 200/579 (34%), Positives = 314/579 (54%), Gaps = 13/579 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 +R PN D++ L++ + + + + D + I+LD LP Y R Sbjct: 6 TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+ Sbjct: 66 TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+ Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPY 185 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+PGL+WN+M+S S WF + ASE I + LPGIGSYIALA+ + ++ AILYA++ Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNITAILYALVA 245 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ++ I L+DQLLFRP++ WS KF+ E W+ ++K+ F+ I Sbjct: 246 IIINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVF 305 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 L N L + I P +++ + W+ V+ + + Sbjct: 306 WLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF- 356 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ AA Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P +FFP+V + + N+W L++ GT WY+LFNVIAG S P + E+ SFH Sbjct: 414 IPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFH 473 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ +T Sbjct: 474 LKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E L V+ +C V F+W PLY + Sbjct: 534 ANNQLHEAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572 >gi|296141005|ref|YP_003648248.1| binding-protein-dependent transporters inner membrane component [Tsukamurella paurometabola DSM 20162] gi|296029139|gb|ADG79909.1| binding-protein-dependent transport systems inner membrane component [Tsukamurella paurometabola DSM 20162] Length = 588 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 233/581 (40%), Positives = 324/581 (55%), Gaps = 15/581 (2%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTT 69 RR + D+L +I +++ Q P D+ + D +LP YA+R+ Sbjct: 19 SGRRGAGIVADVLVVAGAAAMIWLVIRVGQGMDTPIDLQHADARVDTDPANLPYYAARSL 78 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LRM A+ S++FTF YATLAA+SRR VL+P+LD++QS+PILGFL+ TV F+ L+PG Sbjct: 79 LRMFLALGASIVFTFAYATLAARSRRARAVLMPLLDVLQSVPILGFLSITVTLFIALFPG 138 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 +G ELAAIFAIFTSQ WNMTF+ YQSL + PRDL E + LS WQ+FW L VP M Sbjct: 139 STLGLELAAIFAIFTSQAWNMTFAFYQSLISQPRDLGEAAEDIGLSRWQRFWRLDVPSGM 198 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 LVWN MMS GGWFF+ ASE + V LPGIG+Y+A A + DL + +A+ TM+ Sbjct: 199 IPLVWNAMMSFGGGWFFLTASEAVSVAGNEYALPGIGAYVASASADGDLGLVGWAIGTMI 258 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 VI + L + P+ W+ +FRLE + S VL + R+++ G + Sbjct: 259 VVIIGVNFLFWSPLTAWAERFRLEDSATGREPKSVVLTVLRRSHAGEAFGRLMSPIVALT 318 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 R+ D+ + VV V W++ I++ Sbjct: 319 DRFFGVFGRSAPSHDVTPARR-----------RAGDLAFGIVVVAVVGYGLWRAAETILS 367 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 +V +V LG TM RV ++++ A+++W+P+G+ IG P +S +QP Q+ A+FP Sbjct: 368 TSGIAEVGHVFLLGLATMGRVALVMLFATVVWVPIGVIIGLNPKLSRALQPVIQVFASFP 427 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 AN FPL+ + + ++ +L +LM GTQWYILFNVIA ASA P D E A + Sbjct: 428 ANFLFPLITAVLIAGNIPLDLGGVVLMALGTQWYILFNVIAAASAIPGDLLEAADDMSLP 487 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 W WRY++LPG+F YVTG ITA GGAWNASIV+EV S+ GLG YIA++T Sbjct: 488 RWMRWRYVLLPGVFAGYVTGGITAAGGAWNASIVAEVVSYDGQTYHAFGLGDYIADATAA 547 Query: 550 ---GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++LG+ +MC FV+ N LW LY R L Sbjct: 548 TGPAHTSNLLLGISVMCLFVVGTNALLWRRLYRVAERRYSL 588 >gi|254375277|ref|ZP_04990757.1| hypothetical protein FTDG_01471 [Francisella novicida GA99-3548] gi|151572995|gb|EDN38649.1| hypothetical protein FTDG_01471 [Francisella novicida GA99-3548] Length = 574 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 200/573 (34%), Positives = 311/573 (54%), Gaps = 13/573 (2%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRML 73 PN D++ L++ + + + + D + I+LD LP Y RTT+R++ Sbjct: 12 FLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDHSHLPYYMLRTTMRLI 71 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P ++G Sbjct: 72 IGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHSIMG 131 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+SMPGL+ Sbjct: 132 LEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPYSMPGLL 191 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WN+M+S S WF + ASE I + LPGIGSYIALA+ + +++AI YA+ ++ I Sbjct: 192 WNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNIIAIFYALAAIIINIV 251 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 L+DQLLFRP++ WS KF+ E + W+ ++K+ + I L N Sbjct: 252 LFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIVFWLINGA 311 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L + I P +++ I W+ V+ I + F Sbjct: 312 SFLNKK---INLKSPIRDIKILKKLSC-----IAWYIVIISTCIWAGNALWHF----FPD 359 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ AA P +F Sbjct: 360 GDKSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIF 419 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 FP+V + + N+W L++ GT WY+LFNVIAG S+ P + E+ SFH+ GW+W Sbjct: 420 FPIVAVLILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKSFHLKGWKW 479 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 W +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ +T Sbjct: 480 WFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLH 539 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E L V+ +C V F+W PLY + Sbjct: 540 EAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572 >gi|303232762|ref|ZP_07319447.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] gi|302481248|gb|EFL44323.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] Length = 582 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 220/577 (38%), Positives = 337/577 (58%), Gaps = 13/577 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 + R++ +I + + G+ LL + P+ I ++ D+ +LP Y R+ Sbjct: 16 ARTATRVWSDIVVCVGIFALFGLTAFLLQCTTQPIGPQGIPST--VSTDIVNLPYYTLRS 73 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 RM A++ SL+FT +Y +LAA S LG +L+P+LDI+QS+PILGFL+ TV ++ L+P Sbjct: 74 VFRMFVALIASLVFTILYGSLAAHSSTLGKILIPLLDILQSVPILGFLSATVSIWLVLFP 133 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 ++G E A++FAIFTSQ WNMTFS Y SL + P++LEE +RS RL+ WQ+FW L +P + Sbjct: 134 ESMLGVEAASMFAIFTSQAWNMTFSFYHSLQSEPKELEEAARSLRLTHWQRFWVLSMPNA 193 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 L+WN MMS+ GGWFF+ ASEMI V + LPGIGS++A + EQ L I +A+L M Sbjct: 194 TIALLWNCMMSVGGGWFFLTASEMISVNNNTYALPGIGSFVAQSAAEQKLDNIWWAILAM 253 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 + V+ D L+++P + W+ KFR+ ++ + S +L L R ++ + +P Sbjct: 254 VIVVIAIDFLVWKPFLAWAEKFRITQSASVDERHSAILTLIRHSHADEVLRA----LMAP 309 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 L + +L R G+ L ++D+ C + A + + Sbjct: 310 LRAWLDRLTRIFGITGASSKPAAAHL-------RVIDMIIIAAACVLIGVFAVNLLYVVA 362 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + Y LG +T RV +L++++S+IW+P+G+ IG P IS QP Q+ A+F Sbjct: 363 TSVGLFEFAYAGMLGALTFVRVALLVVVSSLIWVPIGVCIGMNPKISRIAQPIVQICASF 422 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PAN FP ++ +H++ ++ +LM GTQWYILFNVIAGASA P+D +++A+SF + Sbjct: 423 PANFIFPFAMTWFMAWHIDLSIGSIILMALGTQWYILFNVIAGASAIPDDLRQMATSFQL 482 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 W+ +ILP IF + TGA+TA GGAWNASIV+E+ +G H+ T GLGAYI +T Sbjct: 483 PLIMRWKTLILPAIFGAWCTGALTAAGGAWNASIVAEIVEFGAFHMETQGLGAYITAATT 542 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 G + ++GV +M V+ NR +W PL + Sbjct: 543 VGDGAKTLVGVTVMSLIVVVSNRLIWTPLQRLAEKRY 579 >gi|258542332|ref|YP_003187765.1| anion transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256633410|dbj|BAH99385.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256636469|dbj|BAI02438.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256639522|dbj|BAI05484.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642578|dbj|BAI08533.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645633|dbj|BAI11581.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648686|dbj|BAI14627.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651739|dbj|BAI17673.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654730|dbj|BAI20657.1| anion transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 582 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 257/549 (46%), Positives = 353/549 (64%), Gaps = 12/549 (2%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 ++ P +PI LD+ LP YA RTT+RM +A+ SL+FTFVYATLAAKSRR G Sbjct: 45 VRHMLGPLVAPASMPIHLDMWHLPGYALRTTIRMFAALACSLVFTFVYATLAAKSRRAGQ 104 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +LVP+LD++QS+PILGFL+FT+ +F+ L+PG+++GAE AAIF IFTSQ WNM MYQ L Sbjct: 105 ILVPLLDVLQSVPILGFLSFTITFFLGLFPGRILGAECAAIFTIFTSQAWNMALGMYQGL 164 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 ++P +LEE +R F L+ WQKFW L VP ++P LVWN MMSM+GGWF VV SE I VG T Sbjct: 165 RSVPPELEETARCFGLTSWQKFWRLEVPCTIPSLVWNAMMSMAGGWFMVVYSESITVGST 224 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278 I LPGIGSY+ +AI +Q++ A+ A++ M+ VI +YDQ+LFRP+ W+ +FRLE Sbjct: 225 DITLPGIGSYVGMAIDQQNIGAVAAAIVAMMVVILVYDQVLFRPLAAWATRFRLESVNAT 284 Query: 279 YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ 338 + W N + + R + + + +++ +++ Sbjct: 285 QVVEPWF-----------LRLVRRTRLLRMCGNALLSVGRRISYLPLGSRPDTMRVDADE 333 Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398 D W+ + V +G +WQ Y H+T + YV LG IT+ RVV ++++AS Sbjct: 334 STGGP-DWLWWGFLLLVCLGASWQVWDYAHTHYTLGQIAYVFGLGGITLVRVVSMLVLAS 392 Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +IW+PVGIW G P + + Q AQ AAFPAN+FFP+ V + ++ L P++WL+ LMI Sbjct: 393 LIWVPVGIWCGLDPTRARRAQILAQYGAAFPANLFFPVFVVVIVHFRLTPDIWLTPLMIL 452 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 G QWYILFNVIAGAS+FP++ EV + + GW WWR IILPGI PYY+ G + A GGAW Sbjct: 453 GAQWYILFNVIAGASSFPSNLLEVGRNLEVRGWFWWRRIILPGIAPYYLVGVMAAAGGAW 512 Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 NA+I SEVA WG L GLGAY+A+ST+ G+ V LG ++MC FV+ N +W PL Sbjct: 513 NAAIASEVAQWGETTLTAHGLGAYVAQSTQLGNISNVGLGTVVMCVFVMFTNALVWRPLS 572 Query: 579 LYGTRCLRL 587 + R L+L Sbjct: 573 DFVARRLKL 581 >gi|320450800|ref|YP_004202896.1| ABC transporter permease [Thermus scotoductus SA-01] gi|320150969|gb|ADW22347.1| ABC transporter, permease protein [Thermus scotoductus SA-01] Length = 553 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 250/570 (43%), Positives = 344/570 (60%), Gaps = 27/570 (4%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN +DLLA + + ++ L +E P PI+LD LP+YA RT RM A+ Sbjct: 10 PNRYDLLAGAVALALLGGFLLASREALGPY---TPTPISLDPRHLPEYALRTAFRMGVAL 66 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 ++S LFT VYA LAAK+R L L+ +LDI+QS+PILGFL +V L+PGK +G EL Sbjct: 67 LLSTLFTLVYAPLAAKTR-LEPFLIAVLDILQSVPILGFLAASVAALSGLFPGKALGFEL 125 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFA+FTSQ WNM FS YQSL +PR+LEE +R +RL+ Q+F L +P+++PGLVWN Sbjct: 126 AAIFAVFTSQAWNMAFSFYQSLKTLPRELEEAARLYRLTPPQRFLRLELPYALPGLVWNA 185 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VG T + LPG+GSY+A A+ + ++ A+ YA+L ML I LYD Sbjct: 186 MMSMSGGWFFVVASEAISVGKTEVDLPGVGSYLARALAQGNMEALAYALLAMLLTILLYD 245 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ WS +F+ E G A SWVL L R++ R +G Sbjct: 246 QLLFRPLVAWSERFKYEERPGEATARSWVLDLLRRSRATRRLGEWLAEAL---------- 295 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 +RFH P + L + + + ++ ++ + Sbjct: 296 --LERALRFHPPR-----------ALGLPPWLGPALLTALGLLGLEAAARLLLPLGPGEW 342 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L I LG T RV+ ++++A+ +W+PVG+ +G RP ++ ++Q Q LAAFPAN+ +P Sbjct: 343 LRAIALGFFTFLRVMGILLLATAVWVPVGVLLGLRPRVAVRVQALLQFLAAFPANLLYPF 402 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + Y L+ ++ + LM GTQWYILFNV AGA+A P D E A ++ ++G R WR Sbjct: 403 AAYLLLRYRLSMEVFSAFLMALGTQWYILFNVTAGATALPADLLEAARAYRLSGARLWRR 462 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LPG+FPY VTG +TA GG WNASIV+EV WG L TGLGAYI +TE G ++ Sbjct: 463 LLLPGVFPYLVTGLVTASGGTWNASIVAEVVQWGPHRLEATGLGAYITRATEAGDERRLL 522 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 LG+ +M V+ LNR LW LY + R Sbjct: 523 LGIAMMSLMVVTLNRLLWRRLYQWAEERFR 552 >gi|208779963|ref|ZP_03247306.1| ABC transporter, permease protein [Francisella novicida FTG] gi|208743967|gb|EDZ90268.1| ABC transporter, permease protein [Francisella novicida FTG] Length = 574 Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 200/579 (34%), Positives = 313/579 (54%), Gaps = 13/579 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 +R PN D++ L++ + + + + D + I+LD LP Y R Sbjct: 6 TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+ Sbjct: 66 TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+ Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPTELTEAATAFKLNAWQRFWRIELPY 185 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+PGL+WN+M+S S WF + ASE I + LPGIGSYIALA+ + ++ AILYA+ Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNITAILYALAA 245 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ++ I L+DQLLFRP++ WS KF+ E W+ ++K+ F+ I Sbjct: 246 IIINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVF 305 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 L N L + I P +++ + W+ V+ + + Sbjct: 306 WLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF- 356 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ AA Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P +FFP+V + + N+W L++ GT WY+LFNVIAG S P + E+ SFH Sbjct: 414 IPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFH 473 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ +T Sbjct: 474 LKGWKWWLKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E L V+ +C V F+W PLY + Sbjct: 534 ANNQLHEAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572 >gi|89072382|ref|ZP_01158961.1| hypothetical protein SKA34_06400 [Photobacterium sp. SKA34] gi|89051914|gb|EAR57366.1| hypothetical protein SKA34_06400 [Photobacterium sp. SKA34] Length = 574 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 192/570 (33%), Positives = 315/570 (55%), Gaps = 16/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 N D++ F + I I + +G + D + + LP RTT+R++ M Sbjct: 20 NSKDIITFTIFIIAITLYKYGWHDMHHSLDQFQP-EVHGALSQLPYDMLRTTMRLVIGMF 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +F AAK++ L +++P ++IM+S+P+LGF+TF+ + F+NL+P V+G E A Sbjct: 79 FSFIFAITAGVAAAKNKHLERIILPFINIMESVPLLGFITFSTIIFINLFPNSVMGLEAA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +IF +FT Q WNM +YQ+L +P++L+E ++ F LS WQKFW + P+++PGL+WN M Sbjct: 139 SIFGVFTGQAWNMALVVYQTLRIVPQELQEAAQLFNLSPWQKFWRVEFPYTIPGLIWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +S S WF +VA+E+I + +PL G+G++I +A+ D+ I++A+L ++ I ++DQ Sbjct: 199 VSQSAAWFAIVAAEIIPLSGKDMPLHGVGTFIQIALNNADVKMIIWAVLAIIINIMVFDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L FRP++ WS KF+ E SW + T L+ I N N ++ Sbjct: 259 LFFRPLVRWSEKFKYESVKTHKHNTSWFYNVLSDTLLLKRIIRPIKNTAEVFVNGGRRYL 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 N + + + I W+ +V +++ Y+ + ++L Sbjct: 319 -----------SNRKRYALPKTLRLFSVISWYAIVLYFCTTWSYELWHYVPKN----EIL 363 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ L T RV+ ++++ +I +P G+WIG P + QP Q+ +A P N+FFPLV Sbjct: 364 SMVPLMAKTTLRVLAAMLLSLVIGVPAGVWIGLSPRATRIAQPIIQIGSALPPNIFFPLV 423 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + + NLW L++ GT WY+LFNVIAG + P + E+A F +TG WW Sbjct: 424 TIALMATSTSLNLWTIPLIMMGTTWYVLFNVIAGVTTLPQEMIELAKLFKLTGRTWWLRF 483 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LP IFPY +TG I+A GGAWN++I +E+ WG + T+GLG YI+++T + P+ L Sbjct: 484 MLPAIFPYILTGVISAAGGAWNSAICAELLQWGVSTVHTSGLGFYISKATIDNALPQAAL 543 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G + M V F+W+PLY R ++ Sbjct: 544 GCVAMSVLVGLCIVFIWNPLYKLTERKYKI 573 >gi|241667474|ref|ZP_04755052.1| ABC-type anion transport system, duplicated permease component [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876021|ref|ZP_05248731.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842042|gb|EET20456.1| ABC anion transporter [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 574 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 201/579 (34%), Positives = 313/579 (54%), Gaps = 13/579 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 +R PN D++ L++ + + + + D + I+LD LP Y R Sbjct: 6 TITKKRFLPNKADVIIVALILVVSALAYYAWNDMHQSFIDASSVSAISLDPSHLPYYMLR 65 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R++ M+ S F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+ Sbjct: 66 TTMRLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLF 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E AAIF IFTSQ WNM +YQ++ +P +L E + +F+L+ WQ+FW + +P+ Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+PGL+WN+M+S S WF + ASE I + LPGIGSYIALA+ + ++ AILYA++ Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNITAILYALVA 245 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ++ I L+DQLLFRP++ WS KF+ E W+ ++K+ F+ I Sbjct: 246 IIINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVF 305 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 L N L + I P +++ I W+ V+ + + Sbjct: 306 WLINGASFLNKK---INLKSPIRDIKILKKLSC-----IAWYIVIISACVWAGNALWHF- 356 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ AA Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P +FFP+V + + N+W L++ GT WY+LFNVIAG S+ P + E+ SFH Sbjct: 414 IPQPIFFPIVAVLILGGGGSLNVWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKSFH 473 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ +T Sbjct: 474 LKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E L V+ +C V F+W PLY + Sbjct: 534 GNNQLHEAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572 >gi|167626895|ref|YP_001677395.1| anion ABC transporter permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596896|gb|ABZ86894.1| ABC-type anion transport system, duplicated permease component [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 574 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 200/579 (34%), Positives = 312/579 (53%), Gaps = 13/579 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 +R PN D++ L++ + + + + D + I+LD LP Y R Sbjct: 6 TITKKRFLPNKADVIIVALILVVSALAYYAWNDMHQSFIDASSVSAISLDPSHLPYYMLR 65 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R++ M+ S F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+ Sbjct: 66 TTMRLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLF 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E AAIF IFTSQ WNM +YQ++ +P +L E + +F+L+ WQ+FW + +P+ Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+PGL+WN+M+S S WF + ASE I + LPGIGSYIALA+ + ++ AILYA++ Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNITAILYALVA 245 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ++ I L+DQLLFRP++ WS KF+ E W+ ++K+ + I Sbjct: 246 IIINIALFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQLVNTIKPIFSTIVF 305 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 L N L + I P +++ I W+ V+ + + Sbjct: 306 WLINGASFLNKK---INLKSPIRDIKILKKLSC-----IAWYIVIISACVWAGNALWHF- 356 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ AA Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P +FFP+V + + N+W L++ GT WY+LFNVIAG S+ P + E+ SFH Sbjct: 414 IPQPIFFPIVAVLILGGGGSLNVWCIPLIMTGTSWYVLFNVIAGVSSLPTEIIEMTKSFH 473 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + GW+WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ +T Sbjct: 474 LKGWKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E L V+ +C V F+W PLY + Sbjct: 534 GNNQLHEAALAVVALCSLVALCVIFIWKPLYKLAETKYK 572 >gi|148240768|ref|YP_001226155.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synechococcus sp. WH 7803] gi|147849307|emb|CAK24858.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synechococcus sp. WH 7803] Length = 586 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 224/572 (39%), Positives = 335/572 (58%), Gaps = 14/572 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRMLSA 75 I DL VL + ++ + + V + + I L+ LP YA+R++LRM Sbjct: 27 PILDLALLVLGLALVAGIASLSSQMAVSFHPEASTLSGIDLNPIHLPAYAARSSLRMFIG 86 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 + ISL V TLAA++ V++P++DI+QS+P+LGFL TV +F+NL+ G ++G E Sbjct: 87 LGISLGICLVVGTLAARNAIAERVILPLVDILQSVPVLGFLAITVAFFINLFRGSLLGLE 146 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 A+IFAI T Q+WN+ FS YQSL +P DL E + +R SGWQ+F L +P LVWN Sbjct: 147 AASIFAIVTGQLWNLIFSYYQSLRTVPSDLSEAATLYRFSGWQRFTQLDLPAGSINLVWN 206 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 MMS +GGWFF SE I V + LPG+GSY+A AI Q L IL+A++TM+ V+ + Sbjct: 207 GMMSFAGGWFFATQSEAISVNNADYTLPGLGSYVAAAIAAQRLDCILWALITMVLVVVIS 266 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKK 315 DQL +RP++ WS +FRL+ PA SW L L ++ LR++ + PL+ +++ Sbjct: 267 DQLFWRPLVAWSERFRLDSGAAGEPARSWFLDLLNRSGGLRWLKAAGAITLQPLTRTLRR 326 Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 L + + SN R S + + ++ +A + I++ + Sbjct: 327 LTQA------------PEQPSNTRESGAVPAWLDPLLLLLAGAAVVWGLDVILHEVGPAE 374 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 L V+ G +T+ RV+ ++ ++S++++P+ + IG RP +S+ +QP +LA+ PAN+ FP Sbjct: 375 TLEVLGFGLLTLGRVLAVVALSSLVFLPLAVMIGLRPRLSTLLQPLILMLASIPANLLFP 434 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 + L + +LM G+QWY+LFN AGASA PND +E+ F + G + W Sbjct: 435 FFTLLFLFSGLPMWIGSVILMALGSQWYVLFNTTAGASAIPNDLREMEQVFGLRGKQRWS 494 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 +LP +F +VTGAITA G AWNASIV+EV +WG L+TTGLGAYIAE+T G P + Sbjct: 495 RYLLPAVFSSWVTGAITASGAAWNASIVAEVVTWGSTTLQTTGLGAYIAEATRSGDGPRI 554 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +LG+++M FV+ NR LW PLY R L Sbjct: 555 LLGLMVMSLFVVGFNRLLWRPLYRIAERRFAL 586 >gi|260892984|ref|YP_003239081.1| binding-protein-dependent transport systems inner membrane component [Ammonifex degensii KC4] gi|260865125|gb|ACX52231.1| binding-protein-dependent transport systems inner membrane component [Ammonifex degensii KC4] Length = 572 Score = 438 bits (1128), Expect = e-120, Method: Composition-based stats. Identities = 220/576 (38%), Positives = 341/576 (59%), Gaps = 13/576 (2%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 ++RR + D+ + V+ ++ L+H P + I L+ LP Y R+ Sbjct: 7 LVARRF--SFIDVAVILTVLALLYTLIHLGAGMAEPLRMGAK--IDLNPIHLPYYVGRSL 62 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 LRM A++ SL+F VY AA S R +L+P LDI+QS+P+LGFL+ T+ + L+P Sbjct: 63 LRMFIALIASLIFAIVYGYWAAYSLRAEKILIPFLDILQSVPVLGFLSATITGLVALFPN 122 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 ++GAELA+IFA+FT+Q WN+T+ YQSL IPR+L + + FRL+ W + W L +PFS Sbjct: 123 SMLGAELASIFAVFTAQAWNITYGFYQSLRTIPRELRDAAAIFRLNWWHRLWQLELPFSA 182 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 LV+N MMS +G WFF+ ASE I V + I LPG+GSY+A AI +D+ A++ +++TM Sbjct: 183 IPLVYNAMMSFAGSWFFLSASEAITVLNRQIYLPGLGSYLATAIMHKDMKALILSIITMA 242 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 I L DQL +RP+ +WS +F+LE+T + W+L + ++++ +R G Sbjct: 243 VTIVLVDQLFWRPVAIWSQRFKLEQTKEQMESH-WLLKMLQRSSLVRAFGSRVLEPMQ-- 299 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 ++ + G + E+ L +R+ ++L +F ++ G ++ + ++ Sbjct: 300 ----RRFIISGGRLVAGTAESSLGAGI-KRIVHLLGVFLLLLLIGYTAYYGYRGV-LLIA 353 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + +L + LG + RVV + + ++I +P+G+++G+ + + QPF +A+FP Sbjct: 354 QLGLEGILDLFRLGFYSFLRVVAAVALGTLIMLPLGVYLGWNAERARRWQPFITFVASFP 413 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 AN+ FP H++ LM+ GTQWYILFNVIAG S+ PND KE A+ + Sbjct: 414 ANMLFPFFTILFLRLHISQEWGAIPLMMLGTQWYILFNVIAGVSSLPNDLKEAAAVLGVK 473 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 GW+ WRY ILPGIFP+ VTG ITA GGAWNA+IV+EV SWG L+ TGLGAYI +TE Sbjct: 474 GWKRWRYFILPGIFPFLVTGGITAAGGAWNATIVAEVVSWGDHTLQATGLGAYITNATEA 533 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 G++P ++ G++ M +V+A+NR W LY Sbjct: 534 GNWPAIMGGIITMSLYVVAINRLFWRRLYHLAEVKY 569 >gi|22299940|ref|NP_683187.1| ABC transporter permease protein [Thermosynechococcus elongatus BP-1] gi|22296125|dbj|BAC09949.1| ABC transporter permease protein [Thermosynechococcus elongatus BP-1] Length = 574 Score = 438 bits (1127), Expect = e-120, Method: Composition-based stats. Identities = 203/567 (35%), Positives = 316/567 (55%), Gaps = 13/567 (2%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D L + +I +I +++ + T D + I L LP Y ++T LRML A +ISL Sbjct: 20 DGLMILALIALIFWIVNTAAQFTGRYDP--TITIELSPAVLPSYTAQTLLRMLIAYMISL 77 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +F+ +Y+ +A +R +L+P+LDI+QSIP+L FL V+ + L+PG +G ELAAI Sbjct: 78 VFSILYSYIAYYNRTAEKILLPLLDILQSIPVLSFLPGVVLALIALFPGSRMGVELAAII 137 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 I+T WNMTFS YQSL ++P++L EV++ +RL WQ+ W L +P GL+WN +MS+ Sbjct: 138 LIYTGMAWNMTFSFYQSLISVPQELREVAKIYRLGWWQRVWTLDLPAGAIGLIWNSVMSV 197 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +GGWFF++A E +G+ LPG+GSY+A A EQD A++Y + ++GVI D L++ Sbjct: 198 AGGWFFLMAIESFTIGEKTFTLPGLGSYLATAANEQDYAALIYGLAVLIGVIITIDILVW 257 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP+I W KF++E S++L R++ LR F+P+ + + R Sbjct: 258 RPLIAWGEKFKMEMVEAENVPKSFLLDFLRRSPTLRAFH---QQIFAPVWERLDEQLRPK 314 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 + P N + ++ V +G + + ++Q + Sbjct: 315 HPRQSLAPRNGQGHWRITPI--------ILLISAVVVGWGAIAFVQQMFKVSWQQWQQIT 366 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +T RV+ ++++ + +PVG+ IG P + +QP Q+ A+ PA FP+++ Sbjct: 367 LGAVLTTLRVMTALLLSLLWTVPVGVAIGRNPRAAQVLQPIVQIAASVPATALFPVLLLA 426 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 ++ + LM+ GT WYILFNVIAGA A P + E A + + W+ WR +ILP Sbjct: 427 LANVGGGLEIGSVALMMLGTMWYILFNVIAGAQAIPTELFEAAVVYQLPWWQRWRTLILP 486 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 GIFPY +TG ITA GGAWNASIVSE + + +T GLGA I+E++ +G FP ++ Sbjct: 487 GIFPYLMTGIITAVGGAWNASIVSEYVEFQNQTEQTLGLGALISEASVRGDFPLLMAATA 546 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M V+ NR +W PLY +L Sbjct: 547 VMSLLVVLTNRLVWRPLYRLAETKYQL 573 >gi|90577269|ref|ZP_01233080.1| hypothetical protein VAS14_09499 [Vibrio angustum S14] gi|90440355|gb|EAS65535.1| hypothetical protein VAS14_09499 [Vibrio angustum S14] Length = 574 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 193/570 (33%), Positives = 315/570 (55%), Gaps = 16/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 N D++ F + I I + HG + D + + LP RTT+R++ M Sbjct: 20 NSKDIITFTIFIIAITLYKHGWHDMHHSLDQFQP-EVKGSLSQLPYDMLRTTMRLVIGMF 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +F AAK++ L +++P ++IM+S+P+LGF+TF+ + F+NL+P V+G E A Sbjct: 79 FSFIFAITAGVAAAKNKHLERIILPFINIMESVPLLGFITFSTIIFINLFPNSVMGLEAA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIF +FT Q WNM +YQ+L +P++++E ++ F LS WQKFW + P+++PGL+WN M Sbjct: 139 AIFGVFTGQAWNMALVVYQTLRIVPKEIQEAAQLFNLSPWQKFWRVEFPYTIPGLIWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +S S WF +VA+E+I + +PL G+G++I +A+ D+ I++A+L ++ I ++DQ Sbjct: 199 VSQSAAWFAIVAAEIIPLSGKDMPLHGVGTFIQIALNNADVKMIIWAVLAIIINIMVFDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L FRP++ WS KF+ E SW + T L+ I N N ++ Sbjct: 259 LFFRPLVRWSEKFKYESVKTHKHNTSWFYNVLSDTLLLKRIIRPIKNTAEIFVNGGRRYL 318 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 + + I W+ +V +++ Y+ + ++L Sbjct: 319 -----------PARSSYALPKTLKLFSVISWYAIVLYFCTTWSYELWHYVPKN----EIL 363 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ L T RV+ ++++ +I +PVG+WIG P + QP Q+ +A P N+FFPLV Sbjct: 364 SMVPLMAKTTLRVLAAMLLSLVIGVPVGVWIGLSPKATRIAQPIIQIGSALPPNIFFPLV 423 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + + + NLW L++ GT WY+LFNVIAG + P + E+A F +TG WW Sbjct: 424 TIALMATNTSLNLWTIPLIMMGTTWYVLFNVIAGVTTLPQEMIELAKLFKLTGRTWWLRF 483 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LP IFPY +TG I+A GGAWN++I +E+ WG + T+GLG YI+++T + P+ L Sbjct: 484 MLPAIFPYILTGVISAAGGAWNSAICAELLQWGVSTVHTSGLGFYISKATIDNALPQAAL 543 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G + M V F+W+PLY R ++ Sbjct: 544 GCVAMSVLVGLCIVFIWNPLYKLTERKYKI 573 >gi|225872174|ref|YP_002753629.1| inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake transporter (NitT) family, permease protein [Acidobacterium capsulatum ATCC 51196] gi|225793760|gb|ACO33850.1| inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake transporter (NitT) family, permease protein [Acidobacterium capsulatum ATCC 51196] Length = 587 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 220/579 (37%), Positives = 320/579 (55%), Gaps = 7/579 (1%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 + R +P I DL ++ + ++L + V V I LP YA + Sbjct: 14 AQVMERTWPFILDLGVAGSLLALFYVVLWVARSWL--HSAVPEVTIYRSPSHLPMYALES 71 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 T+R+ A ++SL+F VY +AA +R L +++ LDI+QSIP+L FL ++ M+L+P Sbjct: 72 TVRIFVAYILSLIFAIVYGYIAAYNRWLEALMIATLDILQSIPVLSFLPGVMLAMMSLFP 131 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 + IG EL AI IFT +VWNM FS Y SL +IP++L E R S WQ+ L +PFS Sbjct: 132 NRQIGIELGAILLIFTGEVWNMAFSFYSSLKSIPKELMEACTINRFSRWQRLIQLELPFS 191 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 GL+WN M+S++ GWFF++ EM VG LPG+GSY+ A D++AI++ +LTM Sbjct: 192 AIGLIWNSMVSVASGWFFLMVCEMFPVGSRNFRLPGLGSYLQTAASNGDVVAIIWGLLTM 251 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 + +I L DQLL+RP+I WS+KF+ E S +L+L R +N L+++ +P Sbjct: 252 MLIIVLTDQLLWRPIIAWSDKFKFENVESAERITSPILHLIRNSNMLQYVSR---RAVTP 308 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 +S G R P S++ L + IG ++ Sbjct: 309 ISEAFYTRVARGGPTRRRLPAADETRRSSR--GRTLTYALIVTAAVLGIGTLAFHAMVLL 366 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + L ++ +T RV ++IAS+ IPVG+ IGF P +++ QP AQ+ A+F Sbjct: 367 REASTHEFLVLLGAAGMTFLRVNASLLIASLWTIPVGVAIGFHPRLANIAQPIAQIAASF 426 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PA FPL+V + + + LM+ GTQWYILFNVIAGA A P+D +EVA F Sbjct: 427 PATALFPLIVIGLMRLGMGLGIGSIALMLLGTQWYILFNVIAGAMAIPSDLREVAGLFRF 486 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + W +ILPGIFPY VTG ITA GGAWNASIV+E ++T GLGA I+ +++ Sbjct: 487 GNLQRWTTLILPGIFPYLVTGLITASGGAWNASIVAEYFKIQGKTMQTIGLGAQISAASD 546 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G FP ++L +IM V+ +NR +W LY G RL Sbjct: 547 HGDFPRLLLATIIMALMVVTINRLVWRRLYHLGETRFRL 585 >gi|320107387|ref|YP_004182977.1| binding-protein-dependent transport systems inner membrane component [Terriglobus saanensis SP1PR4] gi|319925908|gb|ADV82983.1| binding-protein-dependent transport systems inner membrane component [Terriglobus saanensis SP1PR4] Length = 589 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 209/575 (36%), Positives = 317/575 (55%), Gaps = 11/575 (1%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RR +P + DLL + + ++ V I+L +LP+YA + +RM Sbjct: 24 RRTWPVMLDLLVAAIGLACFYGVVRIATMWMAHAQP--DVIISLAPSALPRYAFFSMVRM 81 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A +SL F Y +AA SRRL +++ LDI+QSIP+L FL ++ + L+P + I Sbjct: 82 ALAYFLSLAFAIGYGYVAAYSRRLEALMIAGLDILQSIPVLSFLPGVMLAMVALFPSRQI 141 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G EL AI IFT Q WN+ FS Y SL +IP++L+E + + S WQ+ W L +P++ GL Sbjct: 142 GVELGAIILIFTGQAWNIAFSFYASLKSIPKELDEAATLYGFSRWQRLWQLELPYAAIGL 201 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN M+S++GGWFF++A EM V+G LPG+GSY+ A + A+L+ + TM+G++ Sbjct: 202 IWNSMVSVAGGWFFLMACEMFVLGPRDFRLPGLGSYLQTAASRGNFPAMLWGIATMIGIV 261 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 L DQL++RP+I WS++F+ E+ S +L+ + + R + S PL+ Sbjct: 262 VLTDQLVWRPLIAWSDRFKFEQVESKSHVRSPLLHALQHSTAFRSV---SKKIIRPLNE- 317 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 K+ R R E S +L F + A +I ++ Sbjct: 318 --KIYRHFAATRTTHIEY--DAVKRGAPSRVLRAIVFIALLCGVGYSAVHAID-LLRSVE 372 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Q L ++ T RV + +++AS+ IPVG+ IGF P ++ QP AQ+ A+ PA Sbjct: 373 LQQFLTILRGAAATFLRVNIALVLASLWTIPVGVAIGFNPRLARIAQPVAQIAASVPATA 432 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+++ + + L LLM+ GTQWYILFNVIAGA A P D EVA+ F + + Sbjct: 433 LFPILLLALVRFRGGMGLAAILLMLLGTQWYILFNVIAGAMAIPTDLLEVATLFRFSRIQ 492 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 W+ +ILPGIFPY +TG +TA GGAWNASIV+E L+T GLG I+ +T+ G F Sbjct: 493 KWKTVILPGIFPYLITGLLTASGGAWNASIVAEYFRLHDQTLKTFGLGEQISSATDSGQF 552 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++L ++M V+ +NR +W PL+ +L Sbjct: 553 QLLLLATIVMALMVVTMNRLVWRPLFRLSETKYKL 587 >gi|254372131|ref|ZP_04987624.1| hypothetical protein FTCG_01273 [Francisella tularensis subsp. novicida GA99-3549] gi|151569862|gb|EDN35516.1| hypothetical protein FTCG_01273 [Francisella novicida GA99-3549] Length = 574 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 198/579 (34%), Positives = 311/579 (53%), Gaps = 13/579 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 +R PN D++ L++ + + + + D + I+LD LP Y R Sbjct: 6 TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R++ M+ S F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+ Sbjct: 66 TTMRLIIGMIFSFAFALIAGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFLFLF 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E AAIF IFTSQ WNM +YQ++ +P +L E + +F+L+ WQ+FW + +P+ Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNMALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+PGL+WN+M+S S WF + ASE I + LPGIGSYIALA+ + +++AI YA++ Sbjct: 186 SIPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNIIAIFYALVA 245 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ++ I L+DQLLFRP++ WS KF+ E W+ ++K+ F+ I Sbjct: 246 IIVNIVLFDQLLFRPLVKWSEKFKYESINNKTTDSPWLYRSYKKSQFVNAIKPIFSTIVF 305 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 L N L + I P +++ + W+ V+ + + Sbjct: 306 WLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF- 356 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ AA Sbjct: 357 ---FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAA 413 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P +FFP+V + + N+W L++ GT WY+LFNVIAG S P + E+ SFH Sbjct: 414 IPQPIFFPIVAILILAGDGSLNIWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFH 473 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + GW+WW +P +FPY V G I+A GAWN++I +E+ WG ++ G+GA ++ +T Sbjct: 474 LKGWKWWFKFAIPAVFPYIVCGIISAASGAWNSAIAAELVIWGSNTIKVDGIGALVSTTT 533 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E L V+ +C V F+W PLY + Sbjct: 534 ANNQLHEAALAVVALCSLVAVCVIFIWKPLYKLAETKYK 572 >gi|320450206|ref|YP_004202302.1| ABC transporter permease [Thermus scotoductus SA-01] gi|320150375|gb|ADW21753.1| ABC transporter, permease protein [Thermus scotoductus SA-01] Length = 557 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 261/571 (45%), Positives = 353/571 (61%), Gaps = 25/571 (4%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 PN DLLA VL +G++ + L +E P PI+LD LP+Y RT RM A Sbjct: 10 PNRHDLLALVLTLGLLALFLEASREAAGPFHP---NPISLDPLKLPEYTLRTAFRMGVAF 66 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 ++S LFT VYA LAAK+R L L+ +LDI+QS+PILGFL T F L+PG+ +G EL Sbjct: 67 LLSTLFTLVYAPLAAKTR-LEPFLISLLDILQSVPILGFLAATAGAFAALFPGRALGYEL 125 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 AAIFA+FTSQ WN+ FS YQSL +PR+L+E + FRLS WQ+F+ L +PF++PGLVWN Sbjct: 126 AAIFAVFTSQAWNIAFSFYQSLKTLPRELDEAATLFRLSPWQRFFRLELPFALPGLVWNA 185 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFFVVASE I VG T + LPGIGSY+A AI + + A+L A L+ML I YD Sbjct: 186 MMSMSGGWFFVVASEAIAVGKTQVELPGIGSYLATAIAQGNGRAVLLAALSMLVAILAYD 245 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 QLLFRP++ WS +F+ E G+ PA SWVL L R+T+ LR I ++ FS + +L Sbjct: 246 QLLFRPLVAWSQRFKYEERPGLEPARSWVLDLLRRTHTLRGIAEAT---FSWALEALFQL 302 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R R P+ L I W + + +V Sbjct: 303 ERRRPPRRLILPQWVPVLPLLLLGGIGAFILW-----------------RQLQPLGWLEV 345 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V LG T RV+ ++++A+ IW+PVGI +G RP ++ +++ QLLAAFP N+ +PL Sbjct: 346 ARVFLLGFFTFLRVMGVLLLATAIWVPVGILLGLRPRVAQRVEALLQLLAAFPVNLLYPL 405 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + +HL+ ++ + LM GTQWYILFN +AG+ A P D KE A SF + G WR Sbjct: 406 LALFLLRHHLSLEVFSAFLMALGTQWYILFNAVAGSMALPEDLKEAARSFGLKGLTLWRR 465 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEV 555 ++LPG FP+ +TG ITA GG WNA+IV+EV WG + L+ TGLG+YIA T E+G P + Sbjct: 466 LLLPGTFPHILTGLITASGGTWNAAIVAEVVQWGSLTLQATGLGSYIARWTLEEGQGPHL 525 Query: 556 VLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 +LG+ +M +V+ +NRF+W LY R Sbjct: 526 LLGIAVMSLYVVVINRFVWRRLYRLAEERFR 556 >gi|134302716|ref|YP_001122684.1| ABC transporter permease family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134050493|gb|ABO47564.1| ABC transporter permease family protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 574 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 193/580 (33%), Positives = 311/580 (53%), Gaps = 15/580 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 +R PN D++ L++ + + + + D + I+LD LP Y R Sbjct: 6 TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+ Sbjct: 66 TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+ Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAML 246 S+PGL+WN+M+S S WF + ASE I + LPGIGSYIAL + + +++AI YA++ Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALV 245 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 ++ I L+DQLLFRP++ WS KF+ E + W+ ++K+ + I Sbjct: 246 AIIINIVLFDQLLFRPLVKWSEKFKYESINNKTIDNPWLYRSYKKSQLVNAIKPIFSTIV 305 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 L N L + I P +++ + W+ V+ + + Sbjct: 306 FWLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF 357 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ A Sbjct: 358 ----FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGA 413 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 A P +FFP+V + + N+W L++ GT Y+LFNVI+G S P + E+ SF Sbjct: 414 AIPQPIFFPIVAVLILAGDGSLNVWCIPLIMTGTSCYVLFNVISGFSNLPTEIIEMTKSF 473 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 H+ G +WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ + Sbjct: 474 HLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS-T 532 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 T + L V+ +C V F+W PLY + Sbjct: 533 TANNQLHDAALAVVALCSLVALCIIFIWKPLYKLAETKYK 572 >gi|186685736|ref|YP_001868932.1| binding-protein-dependent transporters inner membrane component [Nostoc punctiforme PCC 73102] gi|186468188|gb|ACC83989.1| binding-protein-dependent transport systems inner membrane component [Nostoc punctiforme PCC 73102] Length = 579 Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 202/567 (35%), Positives = 322/567 (56%), Gaps = 10/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D L ++++ I ++ + T + + I+ ++++LP Y ++T +RM A SL Sbjct: 21 DGLLILVILSFIVAIIRTASKFTGTFEP--ELTISTNINALPGYTAQTLIRMGLAYFFSL 78 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FT +YA A +SR +L+P+LDI+QSIP+L FL V+ ++L+PG+ IG ELAAI Sbjct: 79 IFTLLYAYTAYRSRIAERILIPMLDILQSIPVLSFLPGVVLALISLFPGQRIGVELAAIL 138 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IFT WNMTFS YQSL +IP++L E SR +RL+ WQ+FW L +P + GLVWN +MS+ Sbjct: 139 LIFTGMTWNMTFSFYQSLQSIPQELLETSRVYRLNPWQRFWTLELPSGVIGLVWNSVMSV 198 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +GGWFF++A E +G+ LPG+GS++ A + D AI + ++ ++ +I D ++ Sbjct: 199 AGGWFFLIAIESFTLGNQDFRLPGLGSFLGTAANKGDFKAIFWGLVLLIAIIVATDFFVW 258 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP+I W+ +F+LE SW+L FR++ LR I S F PL + Sbjct: 259 RPLIAWAERFKLEMIETENAPQSWILDTFRRSPTLRAI---SDRVFQPLQTVLDDSL--- 312 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 + F + N + L+ + + + W+++ ++ + D VI Sbjct: 313 -IRSFPVRSVPINAKGNLNLPSFLNWIFVSGFSLIVLWGTWEAV-LLLRTLGWDDWQQVI 370 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +T RV++ +I++ + +PVG+ IG ++ +QP Q+ A+ PA FP+++ Sbjct: 371 KGAMLTALRVIIALILSLLWTVPVGVAIGRNRRLAQVLQPLVQIAASVPATALFPVLLLG 430 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 ++ + LM+ GT WYILFNVIAGA + P+D E AS + ++ + WR +ILP Sbjct: 431 LTRIAGGLQIGAIALMMLGTMWYILFNVIAGAQSIPSDLIEAASVYKLSRLQRWRTLILP 490 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 IFPY +TG I+A GGAWNASIVSE ++ + T+GLGA I+ +T G+F ++ Sbjct: 491 AIFPYLITGIISAVGGAWNASIVSEYVTFQGRVISTSGLGATISYATATGNFSLLLASTA 550 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 IM V+ N +W PLY +L Sbjct: 551 IMSLLVVLTNHLVWRPLYNLAQEKYQL 577 >gi|329113495|ref|ZP_08242276.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] gi|326697320|gb|EGE48980.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] Length = 582 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 263/549 (47%), Positives = 360/549 (65%), Gaps = 12/549 (2%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 ++ P +PI LD+ LP YA RTT+RM +A+ SL+FTFVYATLAAKSRR G Sbjct: 45 VRHMLGPLVAPASMPIHLDMWHLPGYALRTTIRMFAALACSLVFTFVYATLAAKSRRAGQ 104 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L+P+LD++QS+PILGFL+FT+ +F+ L+PG+++GAE AAIF IFTSQ WNM MYQ L Sbjct: 105 ILIPLLDVLQSVPILGFLSFTITFFLGLFPGRILGAECAAIFTIFTSQAWNMALGMYQGL 164 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 ++P +LEE +R F L+ WQKFW L VP ++P LVWN MMSM+GGWF VV SE I VG T Sbjct: 165 RSVPPELEETARCFGLTSWQKFWRLEVPCTIPSLVWNAMMSMAGGWFMVVYSESITVGST 224 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGI 278 + LPGIGSY+ +AI +Q++ A+ A++ M+ VI +YDQ+LFRP+ W+ +FRLE Sbjct: 225 DVTLPGIGSYVGMAIDQQNIGAVAAAIVAMMVVILVYDQVLFRPLAAWATRFRLESVNTA 284 Query: 279 YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQ 338 + W L L R+T LR G N + + R + + + + ++ Sbjct: 285 QVVEPWFLRLVRRTRLLRMGG-----------NALLSVGRRISYLPLGARPDTVHATADD 333 Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398 S D W+ + V + +WQ Y H+T+ + YV LG IT+ RVV ++++AS Sbjct: 334 N-SDGADWLWWGFLLIVCLAASWQVWAYAHTHYTFGQIAYVFGLGGITLLRVVSMLVLAS 392 Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +IW+PVGIW G P + + Q AQ AAFPAN+FFP+ V + ++HL P++WL+ LMI Sbjct: 393 LIWVPVGIWCGLDPMRARRAQILAQYGAAFPANLFFPVFVVVIVHFHLTPDIWLTPLMIL 452 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 G QWYILFNVIAGAS+FP++ EV + + GW WWR IILPGI PYY+ G + A GGAW Sbjct: 453 GAQWYILFNVIAGASSFPSNLLEVGRNLEVRGWFWWRRIILPGIAPYYLVGVMAAAGGAW 512 Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 NA+I SEVA WG L GLGAY+A+ST+ G+ V LG ++MC FV+ N +W PL Sbjct: 513 NAAIASEVAQWGETTLTAHGLGAYVAQSTQLGNISNVGLGTVVMCIFVMFTNALVWRPLS 572 Query: 579 LYGTRCLRL 587 + R L+L Sbjct: 573 DFVARRLKL 581 >gi|320160169|ref|YP_004173393.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319994022|dbj|BAJ62793.1| putative ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 574 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 205/569 (36%), Positives = 316/569 (55%), Gaps = 12/569 (2%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 F + +++ G+ +L GI+ V I+L LP YA R+ RM +A ++ Sbjct: 17 RFGVADVLVLFGLAALLYAGIRLALNAPPAVREPVISLQPQVLPWYALRSVSRMFAAYLL 76 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 S+ FT +Y +AA +RR VL+P+LD++QS+PIL FL ++ + P + AEL++ Sbjct: 77 SMAFTLIYGRVAAYNRRAEQVLIPLLDVLQSVPILSFLPVVLLGLRAILPEG-LAAELSS 135 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 + IFTSQVWN+TF+ YQSL IP++L E S FRL+ W +F L +PF+ LVWN MM Sbjct: 136 VVLIFTSQVWNLTFAWYQSLRTIPKELREASAIFRLNTWFQFKTLELPFAAIALVWNSMM 195 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 S +GGWFF++A+E+ VG+ LPG+G+Y+ A + ++ AI + +L ++ I + DQL Sbjct: 196 SWAGGWFFLMAAEIFTVGEQDYRLPGLGAYLHEAANQGNIPAIFWGVLALILTIIILDQL 255 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 ++RP++ W+ +F+LE P SW L + + ++ F+P++ + Sbjct: 256 VWRPLMAWTERFKLEMVENDNPPTSWFYNLIGHSRIIHWLN---QRIFTPINEAIDARMA 312 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 P ++ R +I V GV + Q++ + + + Sbjct: 313 RWLNPPLLRP-------AHSRKIPWGEIVLGLVCIGVVLYWGAQALRLLF-NLSLSSWSA 364 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + T RV++ ++IA IPVG+ IG P ++S QP Q++A+ PA FP+ V Sbjct: 365 IALGIGATFLRVLISLLIALAWTIPVGVAIGTNPRLASLFQPLVQVVASVPATAIFPIFV 424 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + NL LLM+ GTQWY+LFNVIAGASA P D + A H++ W+ WR +I Sbjct: 425 LLLIQLPGGINLSAILLMLMGTQWYLLFNVIAGASAIPQDLRYTARLIHLSKWQQWRTLI 484 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP +FPY VTG ITA GGAWNASIVSE ++G + T G+GA I +ST +G + ++ Sbjct: 485 LPALFPYLVTGMITASGGAWNASIVSEYVTFGGKIVNTVGIGALITQSTAQGDYSLLLAS 544 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L M V+ +NR W +YL R+ Sbjct: 545 TLAMVVTVVLINRLFWRRMYLLAEERYRM 573 >gi|148658669|ref|YP_001278874.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] gi|148570779|gb|ABQ92924.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] Length = 581 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 207/562 (36%), Positives = 308/562 (54%), Gaps = 13/562 (2%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++V+ I+ +L GI V I+L + +LP YA + RM +A +SL FT + Sbjct: 32 IIVLIIVGLLALGIWLAEAAPAEVRGPEISLSITALPFYAFHSVGRMAAAYALSLGFTLI 91 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 Y +AA + R VL+P+LD++QS+PIL FL ++ F + P I ELA+I IFTS Sbjct: 92 YGYVAAYNPRAERVLMPLLDVLQSVPILSFLPVVLLSFTAILPEG-IAVELASIVLIFTS 150 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 QVWNMTF+ YQSL +PR+L E S FR + W++ L +PF L+WN MMS +GGWF Sbjct: 151 QVWNMTFAWYQSLTTVPRELREASSIFRFTRWRRLTTLELPFGALALIWNSMMSWAGGWF 210 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 F++A+E+ +G LPG+G+Y+ A ++L AI Y + T++ VI L DQL++RP++V Sbjct: 211 FLMAAEIFTLGARDFRLPGLGAYLQTAANAENLPAIGYGIATLIVVIVLLDQLIWRPLLV 270 Query: 266 WSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRF 325 W+++F+LE P SW L + IG L +L Sbjct: 271 WADRFKLEMVESDNPPQSWFYDLLQHATLKDVIGGVVAPVGRTLDALFDRLL-------- 322 Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385 + S S + F + G A G ++ + + L + Sbjct: 323 ----PLPRATSGDTNSGFRIGWLFLALIGAAAVAGTLLGGRMLIQVSPEQWLGIGIGLGA 378 Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T RVV + IA I +P+G++IG +P ++ +QP Q++A+ PA FP++V + Sbjct: 379 TFLRVVAALAIALIWTVPLGVYIGMQPRAAAVLQPIIQIVASVPATALFPVLVLALLSIP 438 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N+ LLM+ GTQWY+LFNVIAGASA P D + ++GW+ WR +ILP +FPY Sbjct: 439 GGLNIAAVLLMLLGTQWYVLFNVIAGASAIPQDLRYTTDLLQLSGWQRWRTLILPALFPY 498 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG ITA GGAWNASIV+E +G ++TG+GA I +T G +P ++ L M Sbjct: 499 LITGMITASGGAWNASIVAEFVVFGGQTYQSTGVGAQITSATADGDYPRLLAATLAMVIT 558 Query: 566 VLALNRFLWHPLYLYGTRCLRL 587 V+A+NR +W LY R+ Sbjct: 559 VVAINRLVWRRLYRLAETVYRM 580 >gi|299136998|ref|ZP_07030181.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] gi|298601513|gb|EFI57668.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] Length = 590 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 209/575 (36%), Positives = 322/575 (56%), Gaps = 10/575 (1%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 +R +P + DL + + ++ + + I+L +LP YA + +R+ Sbjct: 24 KRTWPVVMDLCVAGIGLACFYGVVRIAHYWFGHAEP--EIVISLSPRALPLYAFYSIVRI 81 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A ++SLLF Y +AA SRRL ++V LDI QSIP+L FL ++ + L+P + I Sbjct: 82 GLAYILSLLFAVGYGYVAAYSRRLEPLMVAGLDICQSIPVLSFLPGVMLAMVALFPTRQI 141 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G E+ AI IFT +VWNM FS Y S+ +IPR+L E + +R S WQ+ W L +P+ GL Sbjct: 142 GVEMGAILLIFTGEVWNMAFSFYSSIKSIPRELSEAATIYRFSRWQRLWQLELPYGAIGL 201 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 VWN M+S++GGWFF++A EM V+G LPG+GSY+ A E D AI+ + M+G+I Sbjct: 202 VWNSMVSVAGGWFFLMACEMFVLGTRDFRLPGLGSYLQTAASENDTRAIVMGLAVMIGII 261 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 DQL++RP IVWS+KF+ E+ G S +L+L + LR + + P+S N Sbjct: 262 VAIDQLIWRPAIVWSDKFKFEQVEGGAHVRSPLLHLLTHSGALRTLRRHT---LDPVSEN 318 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + R + + ++ S ++ I +A +++ ++ Sbjct: 319 IYCSLAQRRERRLSLADG----VTEKKGSAWFRWVAVLLLLVAVIYLASEAL-ILLRQVR 373 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 ++ V+ T RV + ++IA+ IPVG+ IGF P ++ QP AQ+ A+ PA Sbjct: 374 APQLVAVLHGAAATFLRVNIALVIAAAWTIPVGVAIGFNPKLARLAQPLAQIAASVPATA 433 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+++ + + LLM+ GTQWYILFNVIAGA A P+D +EVA FH + + Sbjct: 434 LFPVILLALIRVGGGMGIASILLMLIGTQWYILFNVIAGAMAIPSDLREVAQLFHFSTLQ 493 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 WR +ILPGIFP+ +TG +TA GGAWNASI++E + ++T GLGA I+ +T+ G F Sbjct: 494 RWRTVILPGIFPFLITGMVTASGGAWNASIIAEYFHLNNQTMQTVGLGAQISSATDHGEF 553 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++L ++M V+ +NR +W PLY +L Sbjct: 554 HLLLLSTIVMALMVVTINRLVWRPLYRLSETRYKL 588 >gi|163849245|ref|YP_001637289.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aurantiacus J-10-fl] gi|222527230|ref|YP_002571701.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus sp. Y-400-fl] gi|163670534|gb|ABY36900.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aurantiacus J-10-fl] gi|222451109|gb|ACM55375.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus sp. Y-400-fl] Length = 570 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 199/546 (36%), Positives = 300/546 (54%), Gaps = 15/546 (2%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 + + + I+L + +LP YA + RM A ++S +FT VY +AA + R +L+ Sbjct: 39 ASSAPETIRGPEISLSLTALPFYALYSVGRMAMAYMLSFIFTLVYGYIAAYNPRAERILI 98 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+LD++QS+PIL FL ++ + P + EL A+ IFTSQVWNMTF+ YQSL I Sbjct: 99 PLLDVLQSVPILSFLPVVLLGLSAILP-QAFAVELTAVVLIFTSQVWNMTFAWYQSLTTI 157 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P++L E S FR S WQ+F L PF P LVWN MMS +GGWFF++A+E+ +G+ Sbjct: 158 PKELREASSIFRFSWWQRFITLEFPFGAPTLVWNSMMSWAGGWFFLMAAEIFTLGERDFR 217 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPA 281 LPG+G+++ A DL AI + + ++ VI + DQL++RP++VWS +FRLE + Sbjct: 218 LPGLGAFLQTAADTGDLGAIGWGLFSLAVVIVVLDQLVWRPLLVWSRRFRLEFVEREEDS 277 Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341 SW L++++ + +IG ++ L LG P + + +R Sbjct: 278 TSWFYDLWQRSMLVAWIG-----------RRLRWLNDLLGRWLGQHPADDVPTGERRRSL 326 Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401 + +V G + + + ++ T RV V + IA + Sbjct: 327 FGWIALAVIIVLT---GWGLLNGSRFLFSVSLTQWGEILLGVAATFGRVSVAMCIALLWT 383 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+G+ IG R I++ +QP Q+LA+ PA FP++V + + NL LM+ GTQ Sbjct: 384 VPLGVLIGTRQKIAAVLQPVVQILASIPATALFPVLVLALLEFPGGLNLAAIALMMLGTQ 443 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 WYILFNVIAG +A P D + + + GWR WR +ILPG+FPY +TG ITA GGAWNAS Sbjct: 444 WYILFNVIAGVNAIPQDLRFTSDLLQLHGWRRWRTLILPGLFPYLITGLITASGGAWNAS 503 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 IV+E + +T G+G+ IA +T+ G F ++ L M V+ +NR +W LY Sbjct: 504 IVAEYVVFNQQTYQTIGIGSTIAAATDAGDFAKLFAATLTMIITVVTINRLVWRRLYRLA 563 Query: 582 TRCLRL 587 RL Sbjct: 564 EDRYRL 569 >gi|254368619|ref|ZP_04984635.1| hypothetical protein FTAG_01610 [Francisella tularensis subsp. holarctica FSC022] gi|157121522|gb|EDO65713.1| hypothetical protein FTAG_01610 [Francisella tularensis subsp. holarctica FSC022] Length = 574 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 192/580 (33%), Positives = 309/580 (53%), Gaps = 15/580 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 +R PN D++ L++ + + + + D + I+LD LP Y R Sbjct: 6 TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+ Sbjct: 66 TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+ Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAML 246 S+PGL+WN+M+S S WF + ASE I + LP IGSYIAL + + +++AI YA++ Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPDIGSYIALGLTDSNIIAIFFYALV 245 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 ++ I L+DQLLFRP++ WS KF+ E + W+ ++K + I Sbjct: 246 AIIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKFQLVNAIKPIFSTIV 305 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 L N L + I P +++ + W+ V+ + + Sbjct: 306 FWLINGASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF 357 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 F D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ A Sbjct: 358 ----FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGA 413 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 A P +FF +V + + N+W L++ GT WY+LFNVI+G S P + E+ SF Sbjct: 414 AIPQPIFFSIVAVLILAGDGSLNVWCIPLIMTGTSWYVLFNVISGFSNLPTEIIEMTKSF 473 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 H+ G +WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ + Sbjct: 474 HLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVS-T 532 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 T + L V+ +C V F+W PLY + Sbjct: 533 TANNQLHDAALAVVALCSLVALCIIFIWKPLYKLAETKYK 572 >gi|322434965|ref|YP_004217177.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX9] gi|321162692|gb|ADW68397.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX9] Length = 590 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 198/575 (34%), Positives = 320/575 (55%), Gaps = 7/575 (1%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 RR +P + DL V+ + + ++ + P + ++L +LP YA + +R+ Sbjct: 21 RRSWPFVMDLAVAVIGLAVFYCIVLIAKFWAGP--PNTQMVVSLSPRALPAYAFYSVVRI 78 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 A ++SL F Y AA + R+ ++ +LDI+QSIP+L FL ++ + L+P + + Sbjct: 79 GLAYLLSLAFAIAYGYTAAYNTRIEPFMIAVLDILQSIPVLSFLPGVMLAMVGLFPTRHL 138 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 G EL AI IFT VWNM FS Y SL +IPR+L E +R +R S +Q+ L +P++ GL Sbjct: 139 GVELGAIVLIFTGAVWNMAFSFYSSLKSIPRELIEATRVYRYSPFQRLVQLELPYAAIGL 198 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +WN +MS++G WFF++A EM LPG+GSY+ A + + AI + + TM+ +I Sbjct: 199 LWNSIMSVAGAWFFLMACEMFHFRSQDFRLPGLGSYLQTAADQGNGHAIAWGLFTMVAII 258 Query: 253 FLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 DQLL+RP+I WS+KF+ E+ S +L L ++N L + + + Sbjct: 259 VATDQLLWRPLIAWSDKFKFEQVESSKRVASPILALLTQSNALTALKEHTTEPLTEYVYT 318 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + R + +++ + + + + +L + V + +A Q++ +++ Sbjct: 319 -RYAERRIAILKR---QEGRPPAAPSKSANLLAYALIAIAAVVVLYLARQTL-ILISPLQ 373 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 L ++ T RV + + +A+ IPVG+ IGF P ++ QP AQ+ A+ PA Sbjct: 374 RSQYLELLKGAAATFGRVNLSLALAAAWTIPVGVAIGFHPRLARIAQPLAQIAASVPATA 433 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP+++ + + LM+ GTQWYILFNVIAGA A P D KEVA+ FH + + Sbjct: 434 LFPVILLALVRIGGGLGIGSIALMLLGTQWYILFNVIAGALAIPTDLKEVATLFHFSTLQ 493 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 W+ +ILPGIFP+ +TG +TA GGAWNASI++E + L+T GLGA I+ +TE+G F Sbjct: 494 RWKTVILPGIFPFLITGMVTASGGAWNASIIAEYFRLNNQTLQTVGLGAMISNATEQGQF 553 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P ++LG +++ V+ NR +W PL+ RL Sbjct: 554 PILLLGTVMISLMVVTTNRLVWRPLFRLAETRYRL 588 >gi|328676212|gb|AEB27082.1| ABC transporter, permease protein [Francisella cf. novicida Fx1] Length = 524 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 215/524 (41%), Positives = 305/524 (58%), Gaps = 10/524 (1%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 M +VISLL TF++ T AAK++R +++P++DI+QSIP+LGF TV F+ ++P + Sbjct: 1 MFIGLVISLLITFIFGTWAAKNKRAENIIIPLVDILQSIPVLGFFAITVTGFLVIFPTSL 60 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 GA+ A IF I T+Q WNM S YQSL +P++L E + ++LS WQKFW L VPF+MPG Sbjct: 61 WGAQAAVIFGIITAQAWNMILSFYQSLKTVPKELREAADMYQLSAWQKFWKLEVPFAMPG 120 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVG-----DTVIPLPGIGSYIALAIKEQDLLAILYAML 246 LVWN MMSMSG WF +VASE I+V I L GIGS+I A Q+ A+ A++ Sbjct: 121 LVWNTMMSMSGSWFMIVASETIMVNFSASQSIPINLSGIGSFIDAANNAQNFTAVGAAIV 180 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 TML I LYDQLLFRP++ WS KF + + SW L + +K ++ Sbjct: 181 TMLVTIILYDQLLFRPLVSWSEKFVIGDNPSETHSKSWFLTILQKAYVVKIFTTFLAKCS 240 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 + + N K + ++ + +L ++ + +Q++ Sbjct: 241 NKIVNI--KFFKKNLDKAYNQKVHRKADKYESVTKRILWNVIIILMILALLYFVYQTVYA 298 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 ++ V G T RVVVLI+I S+IW+P+GIWIG RP I+ K+QP+AQ+ A Sbjct: 299 KDKDIGIEETFKVFVYGLFTGVRVVVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAA 358 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 AFP NV + + + V ++LN N+W LLM GTQWYILFNVIAGASA P + K A + Sbjct: 359 AFPVNVLYGVFGTLVVMFNLNFNIWCILLMALGTQWYILFNVIAGASAIPEELKLAAENM 418 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH-LRTTGLGAYIAE 545 + G + ++P + PYYVTGAITA GG+WNASI+SE +WG ++ +G+G YI + Sbjct: 419 QLKGIIKLKKFLVPAVMPYYVTGAITAAGGSWNASIISEYINWGKDSVIQASGIGDYITK 478 Query: 546 STEK--GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 T V+LGV++MC V+A N+ W LY Y + Sbjct: 479 YTNMPGDHTSNVLLGVIVMCILVVASNKLFWRRLYNYAENRFSM 522 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 7/208 (3%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 Y T +R++ ++I+ L ++ + P + + P+ F Sbjct: 314 YGLFTGVRVVVLILITSLIWVPIGIWIGLRPKIAQKVQPYAQMAAAFPVNVLYGV----F 369 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 L + + I + W + F++ IP +L+ + + +L G K Sbjct: 370 GTLVVMFNLNFNIWCILLMALGTQWYILFNVIAGASAIPEELKLAAENMQLKGIIKLKKF 429 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG-DTVIPLPGIGSYIALAIKE--QDLLA 240 VP MP V + + G W + SE I G D+VI GIG YI Sbjct: 430 LVPAVMPYYVTGAITAAGGSWNASIISEYINWGKDSVIQASGIGDYITKYTNMPGDHTSN 489 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 +L ++ M ++ ++L +R + ++ Sbjct: 490 VLLGVIVMCILVVASNKLFWRRLYNYAE 517 >gi|156740188|ref|YP_001430317.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] gi|156231516|gb|ABU56299.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] Length = 574 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 206/570 (36%), Positives = 318/570 (55%), Gaps = 13/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 F + V+++ I+ +L GI V I+L + +LP YA + RM +A V Sbjct: 17 PRFTVADGVILLIIVGLLALGIWAAESAPAEVRGPEISLSISALPFYALHSVGRMAAAYV 76 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +SL+FT +Y +AA + R VL+P+LD++QS+PIL FL ++ + P I ELA Sbjct: 77 LSLVFTLIYGYVAAYNPRAERVLMPLLDVLQSVPILSFLPIVLLSLTAILPEG-IAVELA 135 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +I IFTSQVWNMTF+ YQSL +PR+L E S FR + W++ L +PF L+WN M Sbjct: 136 SIVLIFTSQVWNMTFAWYQSLTTVPRELREASAIFRFTRWRRLTVLELPFGALALIWNSM 195 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 MS +GGWFF++A+E+ +G LPG+G+Y+ A E++L AI Y + T++ VI L DQ Sbjct: 196 MSWAGGWFFLMAAEIFTLGARDFRLPGLGAYLQTAANEENLTAIGYGIATLVVVIVLLDQ 255 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L++RP++VW+++F+LE P SW L ++ + + +P+ L Sbjct: 256 LVWRPLLVWADRFKLEMVESDNPPQSWFYDLVQRAALNNAVAGA----VAPIGRVFDALM 311 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 L + L +N+R S +F +V +A + G ++ + + Sbjct: 312 DRLLPLP-----RSLNAETNRRFSVGWLVFAAIIVAALAGVLFG---GRLLLQVSLDQWI 363 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 + T RVV + IA + P+G++IG +P ++ +QP Q++A+ PA FP++ Sbjct: 364 DIGIGIGATFLRVVAALTIALLWTAPLGVYIGTQPRAAAVLQPIVQIVASIPATALFPVL 423 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + N+ LLM+ GTQWY+LFNVIAGA+A P D + ++GW+ WR + Sbjct: 424 VLALLAVPGGLNVAAVLLMLLGTQWYLLFNVIAGAAAIPQDLRYTTDLLQLSGWQRWRTL 483 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILP +FPY +TG ITA GGAWNASIV+E +G ++ G+GA I +T G +P ++ Sbjct: 484 ILPALFPYLITGMITASGGAWNASIVAEYVVFGGQAYQSIGVGAQITSATADGDYPRLLA 543 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L M V+A+NR +W LY R+ Sbjct: 544 ATLAMVVTVVAINRLVWRRLYRLAENVYRM 573 Score = 107 bits (267), Expect = 7e-21, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 97/266 (36%), Gaps = 3/266 (1%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 V+ + + + + I A + + + + Sbjct: 2 TAPTRRVFTPSPPDRPRFTVADGVILLIIVGLLALGIWAAESAPAEVRGPEISLSISALP 61 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS- 439 + ++ R+ +++ + + G + P + P +L + P F P+V+ Sbjct: 62 FYALHSVGRMAAAYVLSLVFTLIYGYVAAYNPRAERVLMPLLDVLQSVPILSFLPIVLLS 121 Query: 440 --CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + + L +L+ W + F + P + +E ++ F T WR + Sbjct: 122 LTAILPEGIAVELASIVLIFTSQVWNMTFAWYQSLTTVPRELREASAIFRFTRWRRLTVL 181 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 LP + ++ + G W + +E+ + G R GLGAY+ + + + + Sbjct: 182 ELPFGALALIWNSMMSWAGGWFFLMAAEIFTLGARDFRLPGLGAYLQTAANEENLTAIGY 241 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 G+ + ++ L++ +W PL ++ R Sbjct: 242 GIATLVVVIVLLDQLVWRPLLVWADR 267 >gi|298250430|ref|ZP_06974234.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] gi|297548434|gb|EFH82301.1| binding-protein-dependent transport systems inner membrane component [Ktedonobacter racemifer DSM 44963] Length = 607 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 221/567 (38%), Positives = 319/567 (56%), Gaps = 6/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D+L +V+G+I +L+ P V I+L + LP YA + LRM+ A ++SL Sbjct: 46 DVLIVCVVLGLIALLVVAASRWVAPLTP--KVSISLAPNMLPAYAGYSMLRMMLAYILSL 103 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FT Y AA R G+V+VP+LDI+QSIP+L FL V+ + +P IG ELA++ Sbjct: 104 IFTLAYGHFAATRPRAGLVMVPLLDILQSIPVLSFLPAVVLALVAAFPHSNIGLELASVL 163 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IFT Q WNMTFS Y S +P+DL+E S L WQ+F L VP SM GL+WN MMS Sbjct: 164 LIFTGQAWNMTFSFYHSARTLPKDLQEFSAIANLRPWQRFLKLEVPSSMIGLIWNSMMSW 223 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +GGWFF++ASE V+GD LPG+GSY+ A D +A+ + T++ +I L + + Sbjct: 224 AGGWFFLMASEQFVLGDHSFQLPGLGSYLQAAANAGDTVALFLGLGTLIVLIILINFFFW 283 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP++ W++KF+LE + P S VL L R + + F PL + + L L Sbjct: 284 RPLVAWADKFKLELGSEADPPTSPVLSLLRHSAL---VAGIQARIFRPLGDLLAGLLNRL 340 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 + E L +L++FW + GV W + ++ H ++ + Sbjct: 341 QPLPSVQQERMLTRKKGLDAGRLLNVFWLLCLLGVVGWGLWNMV-VLLAHISFAGWGRLF 399 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 T R + ++I +P+G+ IG P S ++QP Q++A+ PA FFP+++ Sbjct: 400 IAAGATWLRTLAALLIGVAWTLPLGVAIGLSPRWSKRLQPVVQVVASIPATAFFPILLPL 459 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + +L +LM+ GTQWY+LFNVIAGA A PND KE A+++ +TGWR WR +ILP Sbjct: 460 LVSLPGGLSLAAIVLMLLGTQWYVLFNVIAGAMAIPNDLKEAATTYQVTGWRRWRVLILP 519 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 GIFPY VTG +TA GGAWNASIVSE + ++T GLGA IA + +F ++ L Sbjct: 520 GIFPYLVTGLLTASGGAWNASIVSEYVQFNAHTVQTVGLGAEIAAAATANNFALLLAATL 579 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 +M FV+ +NR LW LY R L Sbjct: 580 LMAAFVVVINRLLWKRLYALAERRYTL 606 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 104/264 (39%), Gaps = 8/264 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL----YVIWLG 383 P + R +D+ CVV G+ + + ++ + + Sbjct: 29 PTTRREEEEAPRRLGGVDVLIVCVVLGLIALLVVAASRWVAPLTPKVSISLAPNMLPAYA 88 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS- 442 +M R+++ I++ I + G + RP + P +L + P F P VV + Sbjct: 89 GYSMLRMMLAYILSLIFTLAYGHFAATRPRAGLVMVPLLDILQSIPVLSFLPAVVLALVA 148 Query: 443 ---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + ++ L LL+ G W + F+ A P D +E ++ ++ W+ + + + Sbjct: 149 AFPHSNIGLELASVLLIFTGQAWNMTFSFYHSARTLPKDLQEFSAIANLRPWQRFLKLEV 208 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P + ++ + G W + SE G + GLG+Y+ + G + LG+ Sbjct: 209 PSSMIGLIWNSMMSWAGGWFFLMASEQFVLGDHSFQLPGLGSYLQAAANAGDTVALFLGL 268 Query: 560 LIMCCFVLALNRFLWHPLYLYGTR 583 + ++ +N F W PL + + Sbjct: 269 GTLIVLIILINFFFWRPLVAWADK 292 >gi|206891166|ref|YP_002247994.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743104|gb|ACI22161.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 570 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 210/568 (36%), Positives = 334/568 (58%), Gaps = 15/568 (2%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 D+ F +V+GI++ +++ E P + V I L+ ++PQYA ++ R+ A ++S Sbjct: 17 IDIAVFFIVLGILSFIIYIASEWGTPYE--RTVEINLNPSNIPQYAIQSLARIFFAYILS 74 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L F+ Y A++S+ +++P+LDI+QSIP+L FL V+ + L+PGK IG ELA I Sbjct: 75 LTFSIWYGYTASRSKIHEKIMIPLLDILQSIPVLSFLPGVVLAMIALFPGKRIGLELACI 134 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 IFT QVWNMTFS Y S+ IP+++ EV + F+ + + KF L +PFS GL+WN MMS Sbjct: 135 LLIFTGQVWNMTFSFYHSISTIPKEMREVVKVFKFNKFSKFLRLDLPFSAIGLIWNSMMS 194 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 ++GGWFF++A EM ++ D LPGIGSYI A E ++ ++Y + TM+ +I + D + Sbjct: 195 VAGGWFFLMACEMFILEDKDFRLPGIGSYIQTAANEGNIEYVIYGLGTMILLIIILDLFI 254 Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319 +RP+IVWS KFR+E +S+VL LF + F++ + N + + + Sbjct: 255 WRPLIVWSQKFRIETIPPEEERESFVLNLFSGSIFIKKVVDLLNNTINKVEKLSYRKFSL 314 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 G + R+S ++ I ++ V I ++ G +V++ ++ D++ + Sbjct: 315 SGNPVVN------------RLSKIMGIISLIIILLVIIWAILKAAG-LVSNISFNDIITI 361 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 I ++ RV V ++IA + +PVG++IG P + +Q Q+ A+ PA FP+++ Sbjct: 362 IKAAFYSLLRVFVALLIALVWTLPVGVYIGLNPRAAKILQSIVQIAASVPATAVFPVILL 421 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + ++ LM+ GTQWY+LFN+IAGASA P D E++ ++ + G R W+ +IL Sbjct: 422 FLIKLGGGLDIGAIFLMLLGTQWYLLFNIIAGASAIPKDLIEISRAYGVKGIRKWKTLIL 481 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 PGIFPY VTG ITA GGAWNA+IVSE S+G + T GLGA I++S+ G+F ++L Sbjct: 482 PGIFPYLVTGLITASGGAWNATIVSEYVSFGGEIMHTAGLGALISQSSASGNFGLLLLST 541 Query: 560 LIMCCFVLALNRFLWHPLYLYGTRCLRL 587 M V+ +NR LW L++ L Sbjct: 542 CFMSLTVVGINRLLWKRLFILAKTKYVL 569 >gi|218885906|ref|YP_002435227.1| binding-protein-dependent transporters inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756860|gb|ACL07759.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 576 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 205/585 (35%), Positives = 312/585 (53%), Gaps = 13/585 (2%) Query: 4 YNILPPFISRRIFPNIF-DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62 + +R+ P + D+ + V G++ + GI R I+L LP Sbjct: 3 QQRIFASATRQEEPTRWLDVFGLLFVAGVLGL---GIWFALAHRHAAAGPDISLAPGMLP 59 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 +YA+ + RM A ++S+LF+ Y TLAA+SRR G VL+ +LDI+QS+PIL FL ++ Sbjct: 60 RYAAYSVGRMFMAYLLSMLFSLGYGTLAARSRRAGPVLLAVLDILQSVPILSFLPVVLLS 119 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + P + + E A++ IFTSQ WN+TF+ YQ+ +P DL E +R+ WQ+F Sbjct: 120 LSAVLP-QAVAVEAASVVLIFTSQAWNITFAWYQAQTTLPGDLREAVSGYRMGAWQRFRT 178 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 L +PF+ L+WN +MS +GGWFF++A+EM VG LPG+GSY+ A +D AIL Sbjct: 179 LDLPFAGVSLLWNSIMSWAGGWFFLMAAEMFTVGSRDFRLPGLGSYLQEAAAREDTPAIL 238 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSS 302 + TM+ VI DQL++RP++ W +F+L +SW L L R + + Sbjct: 239 MGLGTMMVVIVTLDQLVWRPLLAWGERFKLTMVAEDEQPESWFLDLLRAARRMAPVRALL 298 Query: 303 WNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ 362 +P + + + FP + + + + +F + VA G+ W+ Sbjct: 299 ERVLAPAAEGMD------AWLIRRFPPSGESMDVVRHDPWAGRLFGVLLFGCVAFGL-WK 351 Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 G ++ + ++ T RV+ + +A +PVG+ IG ++ +QP Sbjct: 352 GSGLLLQ-VAPESWRDIVIGIAATFLRVMAAMAVALAWTLPVGVLIGTNARLARVLQPVV 410 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q+ A+ PA FP+ + + N LLM+ GTQWY+LFN+IAGAS+ P D K+ Sbjct: 411 QIAASIPATALFPVFLMVLVDVTHGLNAAAVLLMLLGTQWYLLFNIIAGASSIPRDLKDT 470 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A+ ++ + WR +ILP +FPY VTGAITA GGAWNASIVSE S+G L TG+GA Sbjct: 471 AALIGLSRAQRWRTLILPALFPYIVTGAITASGGAWNASIVSEYVSFGGRTLSATGIGAI 530 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 IA +T +G FP + G L M V+ NR +W LY R+ Sbjct: 531 IARATAEGDFPLLFAGTLSMIVTVVGFNRLVWRRLYRLAEERFRM 575 >gi|307152632|ref|YP_003888016.1| binding-protein-dependent transporter inner membrane component [Cyanothece sp. PCC 7822] gi|306982860|gb|ADN14741.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7822] Length = 578 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 199/534 (37%), Positives = 296/534 (55%), Gaps = 8/534 (1%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I ++ LP Y ++T LRM A +SL FT VYA A +S +L+P+LDI+QSIP+L Sbjct: 52 INTNLSELPSYTAQTLLRMTVAYFLSLGFTLVYAYTAYRSAVAAQILLPLLDILQSIPVL 111 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 FL V+ + L+PG+ IG E+AA+ IFT WNMTFS YQSL NIP++L E +R +R Sbjct: 112 SFLPGVVLALIGLFPGQRIGIEIAAVILIFTGMTWNMTFSFYQSLSNIPKELLEAARIYR 171 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ WQ+FW L +P GLVWN +MS++GGWFF++A E +G LPG+GS++A A Sbjct: 172 LNFWQRFWTLELPIGAIGLVWNSVMSVAGGWFFLIAIESFTLGKRSFRLPGLGSFLAKAA 231 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 E + AI + ++ ++GVI L D L++RP+I W +F+ E T S VL R++ Sbjct: 232 DEGNYRAIFWGLMVLIGVIVLLDFLVWRPLIAWVERFKFEMVTSENAPQSEVLDFLRRSP 291 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 LR S P NV R L F + + + Sbjct: 292 TLRAF---SQQILQPFWQNVD---RGLNQTLTRFSRRSFS-GKTSSLGRWFNGLFVSGFA 344 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 + I W+++ ++ D ++ + RV+ +I++ + +PVG+ IG P Sbjct: 345 FIVIWGTWEAV-LLLRTLDLSDWRQLMIGAIESALRVMTALILSLLWTVPVGVAIGRNPK 403 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 ++ +QP Q++A+ PA FP+++ ++ + LM+ GT WYILFNVIAGA Sbjct: 404 LAQILQPIVQIVASVPATALFPVLLLFLARLGGGLQIGSVALMMLGTMWYILFNVIAGAQ 463 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 + P++ E A + ++ W+ +ILPGIFPY +TG ITA GGAWNASIVSE + Sbjct: 464 SIPSELFEAAKIYKLSLIERWQTVILPGIFPYLITGIITAVGGAWNASIVSEYVHFQGHT 523 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 L TTGLG I+ +T G+FP ++ +M V+ NR +W LY +L Sbjct: 524 LTTTGLGETISVATASGNFPLLLAATGVMSLLVVLTNRLVWRRLYQLAQEKYQL 577 >gi|206900627|ref|YP_002250486.1| ABC transporter permease protein [Dictyoglomus thermophilum H-6-12] gi|206739730|gb|ACI18788.1| ABC transporter permease protein [Dictyoglomus thermophilum H-6-12] Length = 570 Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats. Identities = 199/567 (35%), Positives = 318/567 (56%), Gaps = 10/567 (1%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 F L ++++ I +I+ T+ +++ + L LP Y+ + LRM+ A I Sbjct: 13 RFSLGDIIILLFIGSIIYAISSLNTIYSKPTEVISLDLSPQKLPLYSLFSLLRMILAYFI 72 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SL+FT VYA AA + L +L+P+LDI+QSIP+L FL + ++++PG +G E+ + Sbjct: 73 SLIFTIVYAYTAAYKKSLEKILIPLLDILQSIPVLSFLPPVFMAVISMFPGSKLGLEITS 132 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 I IFT QVWNM FS YQSL +IPRDL+E ++ F+L+ WQ+FWYL +P+S GL+WN MM Sbjct: 133 IILIFTGQVWNMVFSFYQSLISIPRDLKEAAQLFKLNPWQRFWYLELPYSAIGLIWNSMM 192 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 S +GGWFF++A EM + + LPG+GSY++ A + DLL I Y + ++ VI L DQL Sbjct: 193 SWAGGWFFLMACEMFTLTNQNFVLPGLGSYLSFAALKGDLLKIFYGLFALITVIILLDQL 252 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 ++RP++ WS KF++E +S VL +R++ + PL ++ L Sbjct: 253 VWRPLLSWSQKFKVEYVQAEEYYESKVLLWYRRSRIFDLL---YKKIILPLRERLEILFI 309 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + + Q ++S +L++ + + + + ++ + Sbjct: 310 SYY------DKKEKQEIKTSKISKLLNLI-VSTILIFLVLRGFIGLLKLIINLPLNMWKD 362 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +I+ +T+ RV ++IA +P+G+ IG P +S IQP Q++A+ PA FP++V Sbjct: 363 IIYSAFLTLLRVTTAVLIALSWTLPLGVRIGMNPKLSKVIQPIVQIVASVPATAIFPVIV 422 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N+ +LM+ GTQWY+LFN+IAG + PND EV+ ++ W+ +I Sbjct: 423 MYLINLPGGLNIASIVLMLLGTQWYLLFNIIAGGMSIPNDLIEVSELLKLSKIDKWKILI 482 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P I P+ VTG ITA GGA+NASIVSE + + + GLGA I E++ KG+ + Sbjct: 483 IPSILPFLVTGGITAMGGAFNASIVSEYIEFHNQIYKIKGLGALITEASSKGNNSLLAAS 542 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585 L+M V+ +NR W L+ L Sbjct: 543 TLVMALIVVTINRLFWKRLFKKSEELL 569 >gi|220909907|ref|YP_002485218.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7425] gi|219866518|gb|ACL46857.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7425] Length = 578 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 200/567 (35%), Positives = 322/567 (56%), Gaps = 10/567 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D L + ++ ++ +++ + T + + I L SLP Y +RT LRML A ++SL Sbjct: 21 DGLIVLSIVALVFAIINTAAKFTGNYNP--NLNIDLSPASLPSYTARTLLRMLVAYLLSL 78 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 F+ YA LA ++ +L+P+LDI+QSIP+L FL V+ + L+PG+ IG ELA+I Sbjct: 79 GFSLGYAYLAFYNKVAERILLPLLDILQSIPVLSFLPGVVLALIALFPGQQIGVELASII 138 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IFT WNMTFS YQSL +P++L EV++ +RLS WQ FW + +P + GL+WN +MS+ Sbjct: 139 LIFTGMAWNMTFSFYQSLTGVPKELREVAQIYRLSWWQNFWTVDLPAGVIGLIWNSVMSV 198 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +GGWFF++A E +G+ L G+GSY+ A + A+ Y ++ ++GVI L D L++ Sbjct: 199 AGGWFFLIAIESFTLGNRSFKLAGLGSYLGTAANAANYAALTYGLIVLIGVIILIDLLIW 258 Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP+I W KF+ + S+VL R++ LR + N F+PL + + T Sbjct: 259 RPLIAWGEKFKFQLVEAENVPQSFVLDFLRRSPTLRALHL---NLFTPLQETIDRQFATT 315 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 + S+ + + ++ + + +W+++ ++ ++ D V+ Sbjct: 316 PASTLPIS----RAKSSPKFNQWVNRLLLGGFAFIVLWGSWEAL-LLLRVLSWADWQTVM 370 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +T RV+V + ++ + +PVG+ IG P +S +QP Q+ A+ PA FP+++ Sbjct: 371 LGAILTTIRVLVALALSLLWTVPVGVAIGRSPRLSQLVQPIVQIAASVPATALFPVLLLA 430 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 ++ + LLM+ GT WYILFNVIAGA A P + E A+ + ++ + WR +ILP Sbjct: 431 LANVGGGLQIGSVLLMMLGTMWYILFNVIAGAQAIPTELLEAATVYQLSWSQRWRTVILP 490 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 GIFPY +TG ITA GGAWNASIVSE + + T GLG+ I++++ G+FP ++ + Sbjct: 491 GIFPYLITGIITAVGGAWNASIVSEYVEFRNQTETTLGLGSIISKASAAGNFPLLLASTV 550 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCLRL 587 M V+ NR +W LY +L Sbjct: 551 TMSLLVVLTNRLVWRRLYRLAQNKYQL 577 >gi|223937549|ref|ZP_03629452.1| binding-protein-dependent transport systems inner membrane component [bacterium Ellin514] gi|223893712|gb|EEF60170.1| binding-protein-dependent transport systems inner membrane component [bacterium Ellin514] Length = 572 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 198/570 (34%), Positives = 311/570 (54%), Gaps = 14/570 (2%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 + DL V ++ +I + +E + + + I LD+ LP Y + R + A V Sbjct: 15 SWVDLAVLVGLVAVIYGITAVAREWSG--QLQPVAEIHLDLRYLPLYTLFSLTRGVIAYV 72 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 IS FT Y +AA+ + V++P+LDI+QSIP+LGFL V+ ++L+P + +G E+A Sbjct: 73 ISFFFTMTYGYVAARVKGSERVMLPMLDILQSIPVLGFLPGFVLGLIHLFPHRNLGLEIA 132 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 ++ IFT QVWNMTFS Y SL ++P +L V+R +L+ WQ+F L + ++ GLVWN M Sbjct: 133 SVLMIFTGQVWNMTFSFYYSLKSVPEELNAVARLSKLTWWQRFLRLDLSYAASGLVWNSM 192 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SM+GGWFF+ SE V+G LPG+GSY++LAI++ ++ A + ++ M +I DQ Sbjct: 193 LSMAGGWFFLTVSEAFVLGSHDFRLPGLGSYMSLAIEQGNVTAQVMGVVAMGSMIVFLDQ 252 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 L++RP++ WS KF E + +SW+ R++ + P ++ KL Sbjct: 253 LVWRPVVAWSQKFSDEDASTRGGTESWLWDRVRRSRL-----------WGPFVRSLSKLL 301 Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 + + + +L F+ AI + + + D Sbjct: 302 PRANKMLSAGLPQPQSRSQKRVFAQILKWFFVIAALSGAIFAGIKYFQLLH-SLSKADWK 360 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ +T RV+ + +AS+ IPVG+ IG P S +QP Q++A+FPA + FP+V Sbjct: 361 SILLSTAMTFGRVIAAVALASLWTIPVGVMIGRNPRWSRAMQPIIQMVASFPAPMLFPIV 420 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V+ V + L++ GTQWY+LFNVI+G+SA P + EV+ ++ WR + Sbjct: 421 VALVLSLGGGLGIGSVFLLLLGTQWYVLFNVISGSSAIPRELWEVSRLKRLSLSARWRKL 480 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILPGIFP +TG ITA GGAWNASIV+E + L T GLGA I+++T++G F + Sbjct: 481 ILPGIFPSLLTGWITAMGGAWNASIVAEYMKYKGQTLSTIGLGALISQATDEGRFALLGA 540 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 V +M V+ +NR +W PL L Sbjct: 541 AVGVMSFTVVLVNRLVWRPLTHQAQTRYSL 570 >gi|238027857|ref|YP_002912088.1| ABC transporter permease [Burkholderia glumae BGR1] gi|237877051|gb|ACR29384.1| ABC transporter, permease protein [Burkholderia glumae BGR1] Length = 573 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 192/580 (33%), Positives = 304/580 (52%), Gaps = 17/580 (2%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 F RR D++ V + + P + + L +L Y+ RTT Sbjct: 6 FPKRREVSLGSDVIVLVCAVLFAWFFATTWIDMHRPAS--ENPAVALAPANLLYYSMRTT 63 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 +R L MV S LF+ V+ LAA+ + V++P ++ M+S+P++GF+TFT +F+ LYP Sbjct: 64 MRFLIGMVWSTLFSLVFGVLAARYAPMRRVILPFVNFMESVPLVGFMTFTTGFFLGLYPH 123 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 +G E AIFA+FT Q WNM ++YQ++ +P++L EV+ SFR + WQ+FW L P+S+ Sbjct: 124 NTMGMEALAIFAVFTGQAWNMMLTVYQTMRVVPKELREVADSFRYNAWQRFWRLEWPYSV 183 Query: 190 PGLVWNMMMSMSGGWFFVVASEMI-VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 PG +WN + S + WF +VASE I + LPG+GSY+++A+ A++YA++ + Sbjct: 184 PGFLWNAINSQAAAWFALVASEAIPAANGDTVLLPGVGSYVSMALDSASYRAVVYALIAL 243 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIY--PADSWVLYLFRKTNFLRFIGYSSWNFF 306 + I + DQ +FRP++ ++ +F+ + + SW + R G Sbjct: 244 VLNIVVIDQFIFRPLVRYTIRFKSDDSAAKRDMQYRSWFYDCLASSRIARSAGELLAQL- 302 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 + + L R +R L R +++ W+ + +Q Y Sbjct: 303 --ANAWIFGLPRVWYALRIDCLTRLL-----ARANWLWSTIWYFALTVGCAYGGYQLWQY 355 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + QD+ + W T RV + ++++ ++++P+G+W+ P + QP AQ+LA Sbjct: 356 VPK----QDLAIMPWWMLETAARVTLAMLLSCLLFVPLGVWMACHPRRLTWCQPVAQVLA 411 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 A P N+++PL+ V H + W +++ GTQWY LFN IAG A P EV+ F Sbjct: 412 AIPPNIYYPLIALFVITAHRSLGWWTIPMIMVGTQWYYLFNAIAGTLAIPTQITEVSQIF 471 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 H+ G WWR +LP IFPY VTG I+A GGAWNA+I +E+ WG T+GLGA+I+ + Sbjct: 472 HLKGAMWWRKYMLPAIFPYIVTGTISAAGGAWNAAIAAEIVQWGSHTASTSGLGAFISTT 531 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 T G LG MC V F+W PLY + R R Sbjct: 532 TANGDHAAAALGCTAMCSMVALCIMFVWQPLYRFAERKFR 571 >gi|219847812|ref|YP_002462245.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aggregans DSM 9485] gi|219542071|gb|ACL23809.1| binding-protein-dependent transport systems inner membrane component [Chloroflexus aggregans DSM 9485] Length = 583 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 202/542 (37%), Positives = 288/542 (53%), Gaps = 15/542 (2%) Query: 47 DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 V I L + +LP YA R+ RM A +S LFT +Y +AA + R VL+P+LD+ Sbjct: 55 ATVQGPAIDLSLSALPFYALRSVGRMALAYALSFLFTMIYGYIAAYNARAERVLIPLLDV 114 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 +QS+PIL FL ++ + P + + EL A+ IFTSQVWNMTF+ YQSL IPR+L Sbjct: 115 LQSVPILSFLPVVLLSLSTVLP-EALAVELTAVVLIFTSQVWNMTFAWYQSLTTIPRELR 173 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 E S FR S WQ+F L PF LVWN MMS +GGWFF++A+E+ +G+ LPG+G Sbjct: 174 EASSIFRFSRWQRFTTLEFPFGALALVWNSMMSWAGGWFFLMAAEIFTLGERDFRLPGLG 233 Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT-GIYPADSWV 285 +++ A DL AI + +LT++ VI + DQ ++RP++ W+ +FRLE A SW Sbjct: 234 AFLQTAANAGDLTAIGWGILTLVAVIVILDQFVWRPLLAWAGQFRLEMIERDDEEAQSWF 293 Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345 L R++ +IG + + + + + Sbjct: 294 YDLIRQSVVAGWIGGLMGAIDRMIMRRLSRGPAPDPYL-------------SGSTRRSWW 340 Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405 + VV V +G ++ + TM RV + IA + +PVG Sbjct: 341 GWVLVVVSVVLVGWGGWVGSGLLLSVPLVQWGAIALSVGATMARVATAMTIALLWTVPVG 400 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 ++IG RP ++ +QP Q+ A+ PA FP++V NL LLM+ GTQWYIL Sbjct: 401 VFIGTRPRAAAILQPIVQIAASVPATALFPVLVLAFLALPGGLNLAAVLLMMLGTQWYIL 460 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 FNVIAGA+A P D + + + GW+ WR +ILPG+FPY VTG ITA GGAWNASIV+E Sbjct: 461 FNVIAGAAAIPQDLRFTSELLQLRGWQRWRTLILPGLFPYLVTGLITASGGAWNASIVAE 520 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + +T G+GA IA +T G F + L M V+ +NR +W LY Sbjct: 521 YVVFNQQTYQTIGIGAQIAVATADGDFAGLFAATLAMIVAVVTINRLVWRRLYRLAETKY 580 Query: 586 RL 587 R+ Sbjct: 581 RM 582 >gi|217967159|ref|YP_002352665.1| binding-protein-dependent transport systems inner membrane component [Dictyoglomus turgidum DSM 6724] gi|217336258|gb|ACK42051.1| binding-protein-dependent transport systems inner membrane component [Dictyoglomus turgidum DSM 6724] Length = 570 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 197/567 (34%), Positives = 305/567 (53%), Gaps = 10/567 (1%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 F ++++ I +I+ T+ +I+ + L LP Y+ + LRM+ A I Sbjct: 13 RFSFGDIIILLFIGSIIYAISSLNTIYSKPTEIISLDLSPQKLPLYSLFSLLRMIFAYFI 72 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SL+FT VYA AA + L +L+P+LDI+QSIP+L FL + + ++PG +G E+ + Sbjct: 73 SLVFTIVYAYTAAYKKSLEKILIPLLDILQSIPVLSFLPPVFMAVIAMFPGSKLGLEITS 132 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 I IFT QVWNM FS YQSL +IP+DL E + +L+ WQ+FWYL +P++ GL+WN MM Sbjct: 133 IILIFTGQVWNMVFSFYQSLISIPKDLREAASLLKLNPWQRFWYLELPYAAIGLIWNSMM 192 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 S +GGWFF++A EM + + LPG+GSY++ A + DLL I Y + ++ VI L DQL Sbjct: 193 SWAGGWFFLMACEMFTLTNQNFVLPGLGSYLSFAALKGDLLKIFYGLFALITVIVLLDQL 252 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 ++RP++ WS KF++E S VL +R++ F+ PL ++ Sbjct: 253 VWRPLLAWSQKFKVEYVQAEGYYSSRVLLWYRRSRIFDFL---YKKVIFPLREKLENFFV 309 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 R + L I ++ + + + ++ Sbjct: 310 LYYNKRGTQEGKASIVSK-------LFITLISLITIALVLRGFIGLLRLIITLPLPMWKN 362 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +I+ +T+ RV ++IA +P+G+ IG P +S IQP Q++A+ PA FP++V Sbjct: 363 IIYSALLTLLRVTTAVLIALSWTLPLGVRIGMNPKLSRLIQPVVQIVASVPATAIFPVIV 422 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N+ +LM+ GTQWY+LFN IAG + PND E+++ ++ WR +I Sbjct: 423 MYLINLPGGLNIASIILMLLGTQWYLLFNTIAGGMSIPNDLIEISALLKLSKIDRWRILI 482 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP I P+ VTG ITA GGA+NASIVSE + + + GLGA I E++ KG + Sbjct: 483 LPSILPFVVTGGITAMGGAFNASIVSEYIEFQNQIYKIKGLGALITEASSKGDNALLAAS 542 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585 L+M V+ +NR W L+ L Sbjct: 543 TLVMAIMVVTINRLFWKRLFKKSEELL 569 >gi|295696444|ref|YP_003589682.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] gi|295412046|gb|ADG06538.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] Length = 569 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 231/569 (40%), Positives = 337/569 (59%), Gaps = 15/569 (2%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 D V+G++ ++ + P + ++LD +LP YA R+ +RM A+ Sbjct: 14 WVDAALLAGVLGLLYGIVQVGKGMVEPYAP-QSMTVSLDPSALPYYAGRSLMRMFVALGA 72 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 S++FT +YA LA++SR +L+P+LDI+QS+P+LGFL+ TVV FM L+PG ++G ELA+ Sbjct: 73 SVVFTVLYARLASRSRLGERILIPLLDILQSVPVLGFLSVTVVGFMALFPGSLLGPELAS 132 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFAIFT QVWNMTF YQS+ +P++L E SR + L G ++F+ L + + LVWN MM Sbjct: 133 IFAIFTGQVWNMTFGFYQSITGVPKELREASRLYGLGGVRRFFVLDLAYGAVPLVWNSMM 192 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 S GGWFF+ SE I V I LPGIGSY+A A+ D+ A+LYAM+TM+ VI + DQL Sbjct: 193 SFGGGWFFLAVSESITVMHRDIRLPGIGSYMAAAMDAGDVRALLYAMVTMVIVIIVVDQL 252 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 +RP++ W+ +F++E+T G SW+L L R+++ + FF P Sbjct: 253 FWRPLVAWAQRFKVEQTAGPDLPTSWMLTLLRRSHIAEWARRV---FFEP---------- 299 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + P ++ ++ + V VA+ + G ++ ++++ + Sbjct: 300 AWLWMIAGRPPRAPRMRMPSVAKKVVSAVIWAAVFVVAVYWIIRG-GLMLRELGWRELFF 358 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + G +T+ RV +++ ++ IPVG+WIG P S QP + A+FPAN+FFPL+ Sbjct: 359 PVLYGVLTLLRVAAAVLLGALWTIPVGVWIGTHPKWSRVAQPVVLVAASFPANMFFPLIT 418 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + H++ LM+ GTQWYILFNVIAGASA P D +E + + GWR WR +I Sbjct: 419 AAFLSLHVSLEWGSVALMMLGTQWYILFNVIAGASAIPGDLREASDLMRLGGWRRWRLLI 478 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP IFP VTG +TA GGAWNASIV+EV SW L TGLGAYI +T G +P +V G Sbjct: 479 LPVIFPSLVTGLVTAAGGAWNASIVAEVVSWKGTQLAATGLGAYITRATTNGDWPAIVWG 538 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +++M FV+A+NR LW LY RL Sbjct: 539 IVVMAAFVVAVNRLLWRRLYRLAENRYRL 567 >gi|86160237|ref|YP_467022.1| ABC transporter inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85776748|gb|ABC83585.1| ABC transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 579 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 208/579 (35%), Positives = 307/579 (53%), Gaps = 15/579 (2%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 F+ R D+ + G + L+ E T V I L + +LP Y + Sbjct: 14 AFLDRSRRIGWTDVALAAGLGGAVYGLVRLAGEWTG--APRPAVEIDLSLGALPGYTLLS 71 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R L+A V+SLLFT Y AA+ R VLVP LDI+QSIP+LGF+ V+ + +P Sbjct: 72 LSRGLAAYVLSLLFTLAYGYWAARDRIAERVLVPALDILQSIPVLGFMPGLVLGLVAAFP 131 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G +G ELAA+ IFT Q WNMTFS Y SL +IPRDL EV+ R WQ+F ++ +PF Sbjct: 132 GSNVGLELAAVVMIFTGQAWNMTFSFYHSLKSIPRDLTEVATLSRFHWWQRFRWVELPFG 191 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 GLVWN MMSM+GGWFF++ SE V+GD LPG+GSY+++A+ D A+ A++ M Sbjct: 192 AIGLVWNGMMSMAGGWFFLMISESFVLGDKDFRLPGLGSYMSVAVAHGDGGAMFAAVVAM 251 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 +I DQLL+RP++VW+ KFR+E + +SW L R++ L + Sbjct: 252 ASMIVAVDQLLWRPVVVWAQKFRVEESGQTEAMESWFLDFLRRSRLLPW----------- 300 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 S +++ RT+ + +R V +G + + +++ Sbjct: 301 ASGLLRRAVRTVSSTPRPP--PRSAPRAGRRSLAGAVSLALFVALLALLGWSAVGLVHLL 358 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + +T+ RV++ + ++ +P G+ IG P +S +QP Q++A+F Sbjct: 359 RRVPFGAWAGIGAAATLTLGRVLLATALGTLWTVPAGLAIGLSPRLSRILQPVVQVVASF 418 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PA + FP VV+ ++ + LLM+ GTQWYILFNVIAGA+A P D +E A + + Sbjct: 419 PAPMLFPAVVAVLAAAGVGLGWGSILLMLLGTQWYILFNVIAGATAIPADLREAARVYRV 478 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + +R + LP +FPY VTG +TA GGAWNASIVSE S+ L T GLGA I+ + Sbjct: 479 GTLQRFRDLYLPAVFPYLVTGWVTAAGGAWNASIVSEYMSFRGRVLATDGLGARISHAAA 538 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G + + +M V NR +W L+ L Sbjct: 539 SGDLAVLAAAITVMAALVAIFNRLVWRRLHGVAEERFSL 577 >gi|209522523|ref|ZP_03271110.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209497040|gb|EDZ97308.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 402 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 205/409 (50%), Positives = 280/409 (68%), Gaps = 8/409 (1%) Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +FW L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L Sbjct: 1 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNL 60 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298 AI + +L M VI YDQLLFRP++ W++KFR+E T+ +SW+L L R+T + + Sbjct: 61 HAIGWVILAMTVVILAYDQLLFRPLVAWADKFRMETTSSGNAPESWLLDLIRRTRLIHRL 120 Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358 + + V+ RFH P+ +++ S + DI W +V + Sbjct: 121 LVPLGWMLARAAR-VRFQLPAFSAPRFHIPQ-------SEKSSKLGDIIWAAIVLLATVY 172 Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 + ++ Y+ + ++ +V LG IT+ RVV+LI IAS+IW+P+G+ IG RP ++ K+ Sbjct: 173 VVYRVFLYVRTGVSMDEIGHVFVLGLITLLRVVLLIAIASVIWVPIGVLIGLRPALAEKV 232 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 QP AQ LAAFPAN+ FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGAS++PND Sbjct: 233 QPLAQFLAAFPANLLFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGASSYPND 292 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 ++E A++FHI GW+WWR ++LPGIFPYYVTGAITA GGAWNASIVSE WG + G Sbjct: 293 YREAATNFHIRGWQWWRQVMLPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHG 352 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGAYIA++T G FP++++G+ +M FV NR LW P+Y Y LRL Sbjct: 353 LGAYIAQTTAAGDFPKIIVGIAVMSLFVTLFNRLLWRPMYAYAEGKLRL 401 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 4/201 (1%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LR++ + I+ + L L + P+ + + P V+ + + Sbjct: 200 TLLRVVLLIAIASVIWVPIGVLIGLRPALAEKVQPLAQFLAAFPANLLFPVFVIVIVRFH 259 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + ++ I W + F++ + P D E + +F + GWQ + + +P Sbjct: 260 ----LNPDIWLSPLIVLGTQWYILFNVIAGASSYPNDYREAATNFHIRGWQWWRQVMLPG 315 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 P V + + G W + SE + GDT + G+G+YIA D I+ + Sbjct: 316 IFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHGLGAYIAQTTAAGDFPKIIVGIAV 375 Query: 248 MLGVIFLYDQLLFRPMIVWSN 268 M + L+++LL+RPM ++ Sbjct: 376 MSLFVTLFNRLLWRPMYAYAE 396 >gi|209521906|ref|ZP_03270577.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gi|209497664|gb|EDZ97848.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 402 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 203/409 (49%), Positives = 278/409 (67%), Gaps = 8/409 (1%) Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +FW L VPFSMPGL+WNMMMSMSGGWFFVVASE I VG+ I LPGIG+Y+A AI +++L Sbjct: 1 RFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNNTITLPGIGAYLAQAISDKNL 60 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298 A+ + +LTM VI YDQ LFRP++ W++KFR+E T+ SW+L + R+T + Sbjct: 61 HAVGWVILTMTVVILAYDQFLFRPLVAWADKFRMETTSSGNAPQSWLLDMMRRTRLIH-- 118 Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358 +P + R I F + +++ + + DI W +V + + Sbjct: 119 -----ELLTPAGVMLATAARIPLRIPFANGRRAGR-ARSEKSTRVGDIVWGILVFMLTVY 172 Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 + ++ + Y+ T +V +V LG IT+ RVV+LI I+S+IW+P+G+ IG RP ++ K+ Sbjct: 173 VIYRVVSYVRTGVTLDEVGHVFVLGLITLLRVVLLIAISSVIWVPIGVLIGLRPALAEKV 232 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 QP AQ LAAFPAN+ FP+ V + +HLNP++WLS L++ GTQWYILFNVIAGA+A+PND Sbjct: 233 QPLAQFLAAFPANLLFPVFVIVIVRFHLNPDIWLSPLIVLGTQWYILFNVIAGATAYPND 292 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 ++EVA++F I GW+WWR ++LPG+FPYYVTGAITA GGAWNASIVSE WG + G Sbjct: 293 YREVATNFRIRGWQWWRQVMLPGVFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHG 352 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 LGA+IAE+T G FP+++LGV +M FV NR LW PLY + LRL Sbjct: 353 LGAFIAETTAAGDFPKIILGVAVMSLFVTLFNRTLWRPLYAFAEARLRL 401 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 4/201 (1%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LR++ + IS + L L + P+ + + P V+ + + Sbjct: 200 TLLRVVLLIAISSVIWVPIGVLIGLRPALAEKVQPLAQFLAAFPANLLFPVFVIVIVRFH 259 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + ++ I W + F++ P D EV+ +FR+ GWQ + + +P Sbjct: 260 ----LNPDIWLSPLIVLGTQWYILFNVIAGATAYPNDYREVATNFRIRGWQWWRQVMLPG 315 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 P V + + G W + SE + GDT + G+G++IA D I+ + Sbjct: 316 VFPYYVTGAITASGGAWNASIVSEFVQWGDTKVAAHGLGAFIAETTAAGDFPKIILGVAV 375 Query: 248 MLGVIFLYDQLLFRPMIVWSN 268 M + L+++ L+RP+ ++ Sbjct: 376 MSLFVTLFNRTLWRPLYAFAE 396 >gi|325525200|gb|EGD03069.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 421 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 197/432 (45%), Positives = 263/432 (60%), Gaps = 12/432 (2%) Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 Q+L +P DL+E SRSFRLS WQ+FW L VPF+MPGLVWN MMSMSGGWFFVVASE I V Sbjct: 1 QALRTVPLDLDEASRSFRLSAWQRFWRLDVPFAMPGLVWNAMMSMSGGWFFVVASEAIAV 60 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275 G+ + LPG+G+Y+A AI +DL A+ +A++ M I LYDQLLF P++ WS +FR Sbjct: 61 GNLHVDLPGVGAYVAQAIANRDLAAVGWAIVAMSVAIVLYDQLLFGPLVAWSERFRYGDA 120 Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335 + SW+L LF ++ ++ + + + R P Sbjct: 121 APTVASRSWMLDLFHRSRWMGRASGPVRALLRRAARARLRGFMSAWRDRIVLPPRT---- 176 Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395 D+ WF + A++ T+ D+ V G +T RV VL+ Sbjct: 177 --------GDVLWFALCGAGCAYAAYELFRLGRATLTWTDLRVVASEGGLTFVRVTVLVT 228 Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +AS+IW+P+GI IG RP ++++IQP Q LAAFPAN+ FP+ V + L P++WL L Sbjct: 229 LASMIWVPIGIAIGLRPGVAARIQPVTQFLAAFPANLLFPVAVFAIVRLRLEPDIWLCPL 288 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 MI G QWY+LFNVIAGASAFP D +E A+ F + WWR+++LPG+ PY+VTGAITA G Sbjct: 289 MILGAQWYVLFNVIAGASAFPADLREAAACFRVRPATWWRHVMLPGVLPYFVTGAITASG 348 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 GAWNASIV+E SWG L GLGAYIA T+ G +P + LGV +M V+A NR +W Sbjct: 349 GAWNASIVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIALGVAVMSLLVIATNRLVWR 408 Query: 576 PLYLYGTRCLRL 587 P+Y + R RL Sbjct: 409 PMYAFAERRTRL 420 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 88/242 (36%), Gaps = 7/242 (2%) Query: 31 IINILLHGIQETTVPRDIVDIVPITLDVHSL---PQYASRTTLRMLSAMVISLLFTFVYA 87 ++ L G ++ + TL L T +R+ + ++ + Sbjct: 179 VLWFALCGAGCAYAAYELFRLGRATLTWTDLRVVASEGGLTFVRVTVLVTLASMIWVPIG 238 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 + + P+ + + P V + L + ++ + Sbjct: 239 IAIGLRPGVAARIQPVTQFLAAFPANLLFPVAVFAIVRL----RLEPDIWLCPLMILGAQ 294 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ P DL E + FR+ + ++ +P +P V + + G W Sbjct: 295 WYVLFNVIAGASAFPADLREAAACFRVRPATWWRHVMLPGVLPYFVTGAITASGGAWNAS 354 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + +E + G T + G+G+YIA D I + M ++ ++L++RPM ++ Sbjct: 355 IVAEAVSWGSTRLDAGGLGAYIARMTDAGDYPRIALGVAVMSLLVIATNRLVWRPMYAFA 414 Query: 268 NK 269 + Sbjct: 415 ER 416 >gi|227518311|ref|ZP_03948360.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227074232|gb|EEI12195.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] Length = 590 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 175/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 69 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + V + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 361 LTIVGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIVFVWQPLYRAAKQKF 588 >gi|281492278|ref|YP_003354258.1| ABC transporter permease [Lactococcus lactis subsp. lactis KF147] gi|161702115|gb|ABX75585.1| ABC transporter, permease protein [Lactococcus lactis subsp. lactis KF147] Length = 599 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 191/576 (33%), Positives = 310/576 (53%), Gaps = 19/576 (3%) Query: 15 IFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 I I L AF+L++ I I + D V + L + +L ++ RT RM+ Sbjct: 36 ILIGIICLFAFILIVTQITINQPLSSLPSQSSVDDVKKMHDFLSIGNLAYFSMRTMFRMI 95 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 M+ S+LF+ + LA K + +++P+++ ++S+P+LGF+TFT + + LYP V+G Sbjct: 96 VGMMWSILFSVICGVLAIKFKTARRIILPMVNFLESVPLLGFMTFTTAFLLGLYPNNVMG 155 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AE AIFA+FT Q WN+ S+YQ + +P+DL+EV+ FR S W+KFW L +S+PGL+ Sbjct: 156 AEALAIFAVFTGQAWNIMLSLYQIMEVVPKDLKEVTSQFRYSAWEKFWRLEFVYSIPGLL 215 Query: 194 WNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 WN+++S S WF +VASE + V + LPGIGSYI +A+ D A +A++ ++ Sbjct: 216 WNLVISQSAAWFAIVASEQVTVAIPKSETLILPGIGSYIQVALDRADFKACGFAVIALII 275 Query: 251 VIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 + + + L+F+P++ + +R + TT P S V L + +NF + + Sbjct: 276 NVVILNFLVFQPLVKATYYYRYDEGTTQGNPPKSIVYNLVKASNFGKILMKWIQKIKDF- 334 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + KL R ++R + +L +V + I W+ ++ + A + ++ Sbjct: 335 --WIFKLPRVWYILRINLIFKYLG-----KVKKYISIIWYILLGYAVVISAIKLYRFL-- 385 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 ++D + L +T RVV+ ++IA+ I+ P+G+W+ S IQP Q++ + P Sbjct: 386 --PHEDFSIIPHLMLLTTLRVVLAMLIAAAIFTPLGVWVASNKRRLSFIQPIGQVVGSIP 443 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 +NV+ P +V +S + W+ L++ G QWY FNVIAG A P+D KEV F ++ Sbjct: 444 SNVYTPFIVIFISLGYKQLEWWILPLIMVGCQWYYFFNVIAGYLAIPDDIKEVTKIFPLS 503 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 ++WW ++P +FPY +T I A G AWNA I +E WG + TGLG YI + Sbjct: 504 KFKWWTRYLIPSMFPYLITAIINAAGAAWNADIAAESLQWGKETINVTGLGQYI--AVND 561 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 G + LG L MC V F+W PLY Y Sbjct: 562 GIKDKSALGTLAMCAVVGLCIIFVWQPLYKYAREKF 597 >gi|312952925|ref|ZP_07771782.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310629121|gb|EFQ12404.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|315153623|gb|EFT97639.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] Length = 590 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 69 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRTAKQKF 588 >gi|315151513|gb|EFT95529.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] Length = 590 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 175/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 69 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + V + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 361 LTIVGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588 >gi|255973271|ref|ZP_05423857.1| ABC transporter permease [Enterococcus faecalis T1] gi|255964289|gb|EET96765.1| ABC transporter permease [Enterococcus faecalis T1] Length = 585 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 64 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYREAKQKF 583 >gi|256762067|ref|ZP_05502647.1| ABC transporter permease [Enterococcus faecalis T3] gi|256683318|gb|EEU23013.1| ABC transporter permease [Enterococcus faecalis T3] Length = 585 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 64 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583 >gi|257085682|ref|ZP_05580043.1| ABC transporter permease component [Enterococcus faecalis Fly1] gi|256993712|gb|EEU81014.1| ABC transporter permease component [Enterococcus faecalis Fly1] Length = 585 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 175/534 (32%), Positives = 285/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 64 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + L W+ Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFLKTLWYVS 355 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583 >gi|227552838|ref|ZP_03982887.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229546263|ref|ZP_04434988.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229550452|ref|ZP_04439177.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|256852709|ref|ZP_05558079.1| ABC transporter [Enterococcus faecalis T8] gi|293382614|ref|ZP_06628545.1| ABC transporter, permease protein [Enterococcus faecalis R712] gi|293387504|ref|ZP_06632054.1| ABC transporter, permease protein [Enterococcus faecalis S613] gi|307269364|ref|ZP_07550711.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307272307|ref|ZP_07553565.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307275184|ref|ZP_07556332.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307281685|ref|ZP_07561904.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307290727|ref|ZP_07570629.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312899285|ref|ZP_07758621.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312908093|ref|ZP_07767073.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312979014|ref|ZP_07790734.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|227178016|gb|EEI58988.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229304432|gb|EEN70428.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308624|gb|EEN74611.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|256711168|gb|EEU26206.1| ABC transporter [Enterococcus faecalis T8] gi|291080014|gb|EFE17378.1| ABC transporter, permease protein [Enterococcus faecalis R712] gi|291083088|gb|EFE20051.1| ABC transporter, permease protein [Enterococcus faecalis S613] gi|306498227|gb|EFM67742.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306503916|gb|EFM73135.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306508126|gb|EFM77248.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306511002|gb|EFM80014.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|306514301|gb|EFM82869.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625904|gb|EFQ09187.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|311288193|gb|EFQ66749.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311293570|gb|EFQ72126.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315026922|gb|EFT38854.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315033145|gb|EFT45077.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315034115|gb|EFT46047.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315146470|gb|EFT90486.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315156438|gb|EFU00455.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315160071|gb|EFU04088.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315160897|gb|EFU04914.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315169124|gb|EFU13141.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315171730|gb|EFU15747.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315174572|gb|EFU18589.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|315575453|gb|EFU87644.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581015|gb|EFU93206.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] gi|327534689|gb|AEA93523.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] gi|329577146|gb|EGG58617.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 590 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 69 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588 >gi|307288219|ref|ZP_07568219.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306500817|gb|EFM70136.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|315165381|gb|EFU09398.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] Length = 590 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 283/534 (52%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 69 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F + K+ ++F + ++ + W+ Sbjct: 309 ATLTKYFSKAFVKFSHFWIYGLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588 >gi|312904784|ref|ZP_07763929.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|310631875|gb|EFQ15158.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|315576827|gb|EFU89018.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] Length = 590 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 175/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 69 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI S G + LG L MC V F+W PLY + Sbjct: 537 KSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588 >gi|29375633|ref|NP_814787.1| ABC transporter, permease protein [Enterococcus faecalis V583] gi|255976265|ref|ZP_05426851.1| ABC transporter permease [Enterococcus faecalis T2] gi|256958551|ref|ZP_05562722.1| ABC transporter permease component [Enterococcus faecalis DS5] gi|256962353|ref|ZP_05566524.1| ABC transporter permease component [Enterococcus faecalis Merz96] gi|256965545|ref|ZP_05569716.1| ABC transporter permease component [Enterococcus faecalis HIP11704] gi|257078141|ref|ZP_05572502.1| ABC transporter permease component [Enterococcus faecalis JH1] gi|257086411|ref|ZP_05580772.1| ABC transporter permease component [Enterococcus faecalis D6] gi|257415672|ref|ZP_05592666.1| ABC transporter permease component [Enterococcus faecalis AR01/DG] gi|257418889|ref|ZP_05595883.1| ABC transporter permease [Enterococcus faecalis T11] gi|257423026|ref|ZP_05600016.1| ABC transporter [Enterococcus faecalis X98] gi|294780797|ref|ZP_06746153.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300859648|ref|ZP_07105736.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|29343094|gb|AAO80857.1| ABC transporter, permease protein [Enterococcus faecalis V583] gi|255969137|gb|EET99759.1| ABC transporter permease [Enterococcus faecalis T2] gi|256949047|gb|EEU65679.1| ABC transporter permease component [Enterococcus faecalis DS5] gi|256952849|gb|EEU69481.1| ABC transporter permease component [Enterococcus faecalis Merz96] gi|256956041|gb|EEU72673.1| ABC transporter permease component [Enterococcus faecalis HIP11704] gi|256986171|gb|EEU73473.1| ABC transporter permease component [Enterococcus faecalis JH1] gi|256994441|gb|EEU81743.1| ABC transporter permease component [Enterococcus faecalis D6] gi|257157500|gb|EEU87460.1| ABC transporter permease component [Enterococcus faecalis ARO1/DG] gi|257160717|gb|EEU90677.1| ABC transporter permease [Enterococcus faecalis T11] gi|257164850|gb|EEU94810.1| ABC transporter [Enterococcus faecalis X98] gi|294452117|gb|EFG20563.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300850466|gb|EFK78215.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|323480296|gb|ADX79735.1| ABC-type anion transport system [Enterococcus faecalis 62] Length = 585 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 64 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583 >gi|315030083|gb|EFT42015.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] Length = 590 Score = 378 bits (972), Expect = e-102, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 69 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKFALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588 >gi|257089467|ref|ZP_05583828.1| ABC transporter permease [Enterococcus faecalis CH188] gi|256998279|gb|EEU84799.1| ABC transporter permease [Enterococcus faecalis CH188] Length = 585 Score = 378 bits (972), Expect = e-102, Method: Composition-based stats. Identities = 175/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 64 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI S G + LG L MC V F+W PLY + Sbjct: 532 KSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583 >gi|315145489|gb|EFT89505.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] Length = 590 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 69 LSPSNLFYFSIRTMFRMIVEMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 128 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 129 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 189 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 248 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 249 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 308 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 309 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 360 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 361 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 416 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 417 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 476 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 477 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 536 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 537 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 588 >gi|257082979|ref|ZP_05577340.1| ABC transporter permease component [Enterococcus faecalis E1Sol] gi|256991009|gb|EEU78311.1| ABC transporter permease component [Enterococcus faecalis E1Sol] Length = 585 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 284/534 (53%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 64 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G QWY FNVIAG Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAG 471 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGT 531 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI + G + LG L MC V F+W PLY + Sbjct: 532 KSIDVTGLGQYI--AANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583 >gi|83589273|ref|YP_429282.1| binding-protein dependent transport system inner membrane protein [Moorella thermoacetica ATCC 39073] gi|83572187|gb|ABC18739.1| Binding-protein-dependent transport systems inner membrane component [Moorella thermoacetica ATCC 39073] Length = 573 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 179/570 (31%), Positives = 297/570 (52%), Gaps = 7/570 (1%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +L +++ ++ + + + + + LP YA R+ LRML A ++SL Sbjct: 6 NLALTMIMAALLISFAYFAYQGHRVLTLAGGTEVVTSISVLPYYAFRSFLRMLGAYLLSL 65 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +FT Y A R L+PILDI+QS+PILGF V +F++L+ G+++G ELA+IF Sbjct: 66 IFTLTYGYKAGTDTRAERWLIPILDILQSVPILGFFPAAVYFFVSLFQGRLLGVELASIF 125 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IFTSQ WNMTF Y+SL IPRDL E + ++R++GW++F L +P +P LV+N +MS Sbjct: 126 LIFTSQAWNMTFGFYESLTTIPRDLLEATVAYRVTGWRRFRTLYLPAGIPKLVYNSIMSW 185 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 +GGW+F++A+E+I +G LPG+GSY+ + +L + +LT++ +I + + ++ Sbjct: 186 AGGWYFLIAAEIIAIGPVEYSLPGLGSYLIRTTERGELGLTMVGLLTLVALITMMNIFIW 245 Query: 261 RPMIVWSNKFRLERTTGI--YPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 RP+ W+ F+ E +G L+ + R I + L V L Sbjct: 246 RPLSTWAENFKYEFGSGGSNRLPSGLGYRLWWQAPGFREIRIGVIKGGAFLGRAVGNLGA 305 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L PE + + C L + ++ A+ ++G + V Sbjct: 306 RLA----PGPEKWQRWCRYLARVERLVAWGLALLLVYALVRGLLALGTLFLEPWQPQVFS 361 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + + FR++ +++ +PV IWIG + + P ++LA+ PA FP++V Sbjct: 362 IPAALLFSFFRLMAAYLLSLAWTLPVAIWIGHNERVYEFLTPVFEILASVPATALFPIIV 421 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + NL LL++ G QWY+LFN+IAG + P D KE A++F + GW + R ++ Sbjct: 422 FVLIGLTGGMNLAAILLVLTGMQWYLLFNLIAGVKSIPGDLKEAAAAFGLRGWGYLRRVV 481 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST-EKGSFPEVVL 557 LP + P +TG+ITA GG WNA IV+E + G+G+ + +T GSF + Sbjct: 482 LPAMVPSLITGSITAWGGGWNALIVAEYVVYAGHTYTAFGIGSLLDMATYGSGSFQVIWS 541 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++ M ++ +NRF W LY R ++ Sbjct: 542 SLIAMMVTIVLMNRFFWRRLYEMAARRFKI 571 >gi|256618637|ref|ZP_05475483.1| ABC transporter permease component [Enterococcus faecalis ATCC 4200] gi|256598164|gb|EEU17340.1| ABC transporter permease component [Enterococcus faecalis ATCC 4200] Length = 585 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 174/534 (32%), Positives = 283/534 (52%), Gaps = 18/534 (3%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L ++ RT RM+ M S LF+FV+ LA K + V++P+++ ++S+P+LGF Sbjct: 64 LSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPLLGF 123 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT + + L+PG V+GAE AIFAIFT Q WN+ ++YQ + IP DL V+ F+ + Sbjct: 124 LTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQFKYN 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 W+KFW L +S+PGL+WN+++S + WF +VASE V +T + LPGIGSYI +A Sbjct: 184 AWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYIQVA 243 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER-TTGIYPADSWVLYLFRK 291 + D + L+A+ +L + + + L+F+P++ + F+ E P S + +L +K Sbjct: 244 LNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHLLKK 303 Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 ++ + F ++ K+ ++F + ++ + W+ Sbjct: 304 ATLTKYFSKAFVKFSHFWIYDLPKV--------WYFFKLDYLYRLLAKLRHFFKTLWYVS 355 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + + + ++ +QD + L T RV + +++A II+ P+ IW+ Sbjct: 356 LTIIGVYCSIKLYHFL----PHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVAND 411 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 S +QP Q+L + P+NV+ P +V +S W+ L++ G Q Y FNVIAG Sbjct: 412 NRRLSIVQPIGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQGYFFFNVIAG 471 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A P+D ++V F ++ W+WW ++P I PY +T I A G AWNA I +E WG Sbjct: 472 YLAIPDDIRDVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGK 531 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGLG YI S G + LG L MC V F+W PLY + Sbjct: 532 KSIDVTGLGQYI--SANDGVKDKSALGTLAMCFVVGLCIAFVWQPLYRAAKQKF 583 >gi|28378703|ref|NP_785595.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|28271540|emb|CAD64445.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum WCFS1] Length = 580 Score = 363 bits (933), Expect = 4e-98, Method: Composition-based stats. Identities = 176/576 (30%), Positives = 300/576 (52%), Gaps = 26/576 (4%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIV--------PITLDVHSLPQYASRTTLRML 73 ++ L IGI+ ++ I + +P + L + L A RTT R+ Sbjct: 17 MMWLGLSIGILLMIGWCIAKMNLPLSRLPTQGYLDTTGGKDYLTMSHLVAAALRTTTRLF 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 M S+LF+ ++ LAA+ R V++PI+++++S+P+LGFLTFT +FM L+P V+G Sbjct: 77 IGMGYSILFSLIFGILAARYRSARYVILPIVNLLESVPLLGFLTFTTAWFMGLFPNNVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E AIF +FT+Q WN+ ++YQSL P DL V++ F + WQ+FW L ++ P ++ Sbjct: 137 VEAVAIFGVFTAQAWNIMLALYQSLRVTPEDLMTVAKQFGCNSWQRFWRLEFLYATPSIL 196 Query: 194 WNMMMSMSGGWFFVVASE---MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 WN+++S S WF +VA E ++V + + LPGIGSYI +A+ + A++ A++ ++ Sbjct: 197 WNIVISQSAAWFALVACEQATIVVPKNETLVLPGIGSYIQIALDTANFGAVINAVIALVI 256 Query: 251 VIFLYDQLLFRPMIVWSNKFRL-ERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 + L + +F+P+I + ++ T P S V L + + Sbjct: 257 CVLLVNVFIFQPLIKGTAHYKYGTSTDSQLPQQSQVYDLMVMAKVPLLVKRLHRHIRYWW 316 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 K + LG R R+ ++W V ++ ++ Sbjct: 317 LYGAPKQWQKLGFSRII------------RILKKYTVYWRIAWWLVIAVGLYRLGVLLIK 364 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + + ++ + +T RV++ ++++++I+IP+ +W+ IQP Q+L + P Sbjct: 365 YLDWINLSVLFKWTFLTTSRVLIAVLLSALIFIPLAVWVASNARRLKLIQPVGQVLGSIP 424 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 A+++ P+V ++ + W+ L++ GTQWY FN+IAG A P+D K+V + FH++ Sbjct: 425 ADIYIPIVALMITLTGTTQHWWVIPLIMTGTQWYFFFNIIAGYLAIPSDIKDVVNIFHLS 484 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 GWRWW + ++P +FP ++T I A G AWNA I +E+ SWG TGLGAYIA+ Sbjct: 485 GWRWWTHFLIPSLFPSFITAIINAAGAAWNADIAAELISWGTHQYAVTGLGAYIAQ--NI 542 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + P GVLI+C V +W PLY + R Sbjct: 543 NNKPAEATGVLIICVIVGLCVVLIWQPLYRFAERRF 578 >gi|312797025|ref|YP_004029947.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454] gi|312168800|emb|CBW75803.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 407 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 187/380 (49%), Positives = 258/380 (67%), Gaps = 8/380 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+IG+I + G ++T P + I+LD LP+YA RTTLRML Sbjct: 23 RLLPNRWDFVAFPLIIGLIAMAAIGFEQTMAPISTLKTQAISLDPIYLPEYALRTTLRML 82 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AM+ + +FT Y TLAAKSRR VLVP+LDI+QS+P+LG+++FTV +F+ L+P +V G Sbjct: 83 AAMLAAFVFTLAYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVAFFIALFPTRVAG 142 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AE AAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+GWQ+FW L VPFSMPGL+ Sbjct: 143 AECAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKLEVPFSMPGLI 202 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 WNMMMSMSGGWFFVVASE I VG+ I LPG+G+Y+A AI E++L AI + +LTM VI Sbjct: 203 WNMMMSMSGGWFFVVASEAITVGNHTITLPGVGAYLAQAITERNLPAIGWVILTMTLVIL 262 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 YDQLLFRP++ W++KFR+E T SW+L L R+T + + + F+ ++ Sbjct: 263 AYDQLLFRPLVAWADKFRMENTASASAPQSWLLDLVRRTRLIHQLLVPAGWLFARMAR-- 320 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L + P + +++ S + D+ W +V + + W+ IGY+ T+ Sbjct: 321 ------LPLRWRKLPLVGPAVGPHRKPSRLGDLAWGGLVLAGTVYLLWRVIGYVSTGVTW 374 Query: 374 QDVLYVIWLGCITMFRVVVL 393 +V +V+ +GCIT+ RV+VL Sbjct: 375 DEVWHVLAMGCITLARVLVL 394 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 98/266 (36%), Gaps = 10/266 (3%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDVLYVIW 381 P+ + + + D F ++ G+ A I + D +Y+ Sbjct: 13 PKRDAAASAWRLLPNRWDFVAFPLIIGLIAMAAIGFEQTMAPISTLKTQAISLDPIYLPE 72 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF----PLV 437 T R++ ++ A + + G + P +L + P + Sbjct: 73 YALRTTLRMLAAMLAAFVFTLAYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVAFF 132 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 ++ + W + F+ P D EV+ FH+TGW+ + + Sbjct: 133 IALFPTRVAGAECAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTGWQRFWKL 192 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P + + + G W + SE + G+ + G+GAY+A++ + + P + Sbjct: 193 EVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNHTITLPGVGAYLAQAITERNLPAIGW 252 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTR 583 +L M +LA ++ L+ PL + + Sbjct: 253 VILTMTLVILAYDQLLFRPLVAWADK 278 >gi|328676224|gb|AEB27094.1| ABC transporter, permease protein [Francisella cf. novicida Fx1] Length = 445 Score = 356 bits (915), Expect = 4e-96, Method: Composition-based stats. Identities = 162/455 (35%), Positives = 247/455 (54%), Gaps = 12/455 (2%) Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 +G E AAIF IFTSQ WNM +YQ++ +P +L E + +F+L+ WQ+FW + +P+S+PG Sbjct: 1 MGLEAAAIFGIFTSQAWNMALILYQTIRIVPTELTEAATAFKLNAWQRFWKIELPYSVPG 60 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 L+WN+M+S S WF + ASE I + LPGIGSYIALA+ + +++AI YA+ ++ Sbjct: 61 LLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALALTDSNIIAIFYALAAIIIN 120 Query: 252 IFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSN 311 I L+DQLLFRP++ WS KF+ E + W+ ++K+ + I L N Sbjct: 121 IVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIVFWLIN 180 Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 L + I P +++ + W+ V+ + + F Sbjct: 181 GASFLNKK---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF----F 228 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 D+ Y+I L T RV + ++I+ I P+GIWIG + IQP Q+ AA P Sbjct: 229 PDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQP 288 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 +FFP+V + + N+W L++ GT WY+LFNVIAG S P + E+ SFH+ GW Sbjct: 289 IFFPIVAVLILAGDGSLNVWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFHLKGW 348 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +WW +P +FPY V G I+A GGAWN++I +E+ WG ++ G+GA ++ +T Sbjct: 349 KWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQ 408 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 E L V+ +C V F+W PLY + Sbjct: 409 LHEAALAVIALCSLVALCVIFIWKPLYKLAETKYK 443 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 4/212 (1%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D+ L TT+R+ AM+IS+ S + + PI+ I +IP F Sbjct: 232 DMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIFF 291 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 V + + I I T W + F++ N+P ++ E+++SF L G Sbjct: 292 PIVAVLILAGDGS----LNVWCIPLIMTGTSWYVLFNVIAGFSNLPTEIIEMTKSFHLKG 347 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W+ ++ +P P +V ++ + G W +A+E+++ G I + GIG+ ++ Sbjct: 348 WKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANN 407 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 L A++ + ++ L +++P+ + Sbjct: 408 QLHEAALAVIALCSLVALCVIFIWKPLYKLAE 439 >gi|157827293|ref|YP_001496357.1| ABC-type anion transport system permease component [Rickettsia bellii OSU 85-389] gi|157802597|gb|ABV79320.1| ABC-type anion transport system permease component [Rickettsia bellii OSU 85-389] Length = 422 Score = 342 bits (878), Expect = 1e-91, Method: Composition-based stats. Identities = 199/443 (44%), Positives = 273/443 (61%), Gaps = 24/443 (5%) Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + N+ FS YQSL IP DL E S F+LS +KF L +PF+ GL+WN MMSMSGGWFF Sbjct: 1 MPNIAFSFYQSLKTIPNDLVEASNIFKLSPLKKFLKLELPFATQGLIWNSMMSMSGGWFF 60 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 +VASE +V+G I +PGIGSYIA AI E+D+++I+Y+++TM VI LYDQ++FRP+IVW Sbjct: 61 LVASETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYDQIIFRPLIVW 120 Query: 267 SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFH 326 ++KFR E S V+ LF+KTNF+ ++ + L L +I Sbjct: 121 ADKFRYENIVKACAPKSMVVDLFKKTNFITIY----------IAKIISNLLSKLYIIFIK 170 Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT 386 N ++ I W+ + +AI A + ++ + + L VI LG T Sbjct: 171 PIPNL-----------LIAIIWYGCLACLAIYAANKCYDFVKTTISLSEFLLVIKLGFFT 219 Query: 387 MFRVVVLIIIASIIWIPVG--IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 + RV+ ++I+A IIW WI + K+ P Q+ +AFPAN FP VV +S+Y Sbjct: 220 LLRVITMVILALIIWGAYRCIYWI-KNSSYTEKMMPVIQIASAFPANFLFPFVVIFISHY 278 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +LNPN+ LS LMI GTQWYILFNVIAG SAFP D KE A+ F + GW WW+ IILPGIFP Sbjct: 279 NLNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNIILPGIFP 338 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + VTG ITA GGAWNASIV+E+ SWG++ + TGLG YI + + V +GV++M Sbjct: 339 HIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSLVAIGVVVMSL 398 Query: 565 FVLALNRFLWHPLYLYGTRCLRL 587 +V+ ++R +W PLY +L Sbjct: 399 YVIVISRLVWRPLYNLSVSKSKL 421 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 90/199 (45%), Gaps = 5/199 (2%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLA-AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T LR+++ ++++L+ Y + K+ ++P++ I + P F V++ Sbjct: 217 FFTLLRVITMVILALIIWGAYRCIYWIKNSSYTEKMMPVIQIASAFPANFLFPFVVIFIS 276 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + +A F + W + F++ P DL+E + FR+ GW + + Sbjct: 277 HYN----LNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNII 332 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P P +V ++ + G W + +E++ G+ I G+G YI A D + Sbjct: 333 LPGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSLVAIG 392 Query: 245 MLTMLGVIFLYDQLLFRPM 263 ++ M + + +L++RP+ Sbjct: 393 VVVMSLYVIVISRLVWRPL 411 >gi|124516267|gb|EAY57775.1| putative binding-protein-dependent transport systems inner membrane component [Leptospirillum rubarum] Length = 577 Score = 333 bits (854), Expect = 5e-89, Method: Composition-based stats. Identities = 158/535 (29%), Positives = 279/535 (52%), Gaps = 3/535 (0%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D+ SLP +R+ LR+ +A ISL+F +VY L A +R +L+P+LDI+QSIP+LG Sbjct: 42 GTDLASLPGDLARSVLRLFAAYFISLVFAYVYGLLTALTRWGEKILLPLLDILQSIPVLG 101 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 F + ++L+ + G ELA++ I TS WNM F++++S+ P + +E+ + Sbjct: 102 FFPAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTAPVEYKELLDGMQA 161 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 GW + Y VP ++P +V+N ++S + GW+F++A EMI +G L G+GS++ ++ Sbjct: 162 PGWLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYRLRGLGSFLVVSTS 221 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP-ADSWVLYLFRKTN 293 +L L ++ ++ + L D LFRP++VWS +F ++++ + S +++ Sbjct: 222 SGKILDALAGIVLLVVTVVLMDFFLFRPVVVWSQRFSIDQSASLAGETRSVFREWLMESD 281 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 L + + + L R P+ + + VS +L + ++ Sbjct: 282 VLALPRRLLSSSLTAGRAGLYALLRRFPKTFPAGPDGHGRGIF-RWVSPVLGMASLFLLS 340 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 + + + + + + +M R++ +++ +PV ++ P Sbjct: 341 ILGYSGVESMKRALASGVPWDGLSELPLDMVYSMLRLLAGYLLSLCWTVPVAWYVFVHPR 400 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + + P AQ++A+ PA FP ++ V + NL LL++ G QWY+LFN++AGA Sbjct: 401 LMRTVMPVAQVMASVPATALFPFIIVLVVRTTHSMNLASILLLLSGMQWYLLFNLLAGAG 460 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 FPN+ +E A + + G + R I LP +FP VTG+ITA GG WNA IVSE + + Sbjct: 461 TFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGGGWNALIVSEYVVYDQKN 520 Query: 534 LRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G+GA++ + T G+ +V+ +L++ V+ LNRF W PLY T L Sbjct: 521 YSVRGIGAFLDKVTYGSGNEILIVVSLLMLTVVVVTLNRFFWTPLYERVTSRYGL 575 >gi|206603108|gb|EDZ39588.1| Putative transmembrane transporter [Leptospirillum sp. Group II '5-way CG'] Length = 577 Score = 331 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 159/535 (29%), Positives = 278/535 (51%), Gaps = 3/535 (0%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D+ SLP +R+ LR+ +A +SL+F +VY L A +R +L+P+LDI+QSIP+LG Sbjct: 42 GTDLASLPGDLARSVLRLFAAYFLSLVFAYVYGLLTALTRWGEKILLPLLDILQSIPVLG 101 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 F + ++L+ + G ELA++ I TS WNM F++++S+ P + +E+ + Sbjct: 102 FFPAVIFLLIHLFRNPLEGVELASVILIATSMAWNMAFAVFESIRTAPVEYKELLDGMQA 161 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 GW + Y VP ++P +V+N ++S + GW+F++A EMI +G L G+GS++ ++ Sbjct: 162 PGWLRLVYFLVPVTIPKMVYNSILSWAQGWYFLIACEMISMGSVHYQLRGLGSFLVVSTS 221 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP-ADSWVLYLFRKTN 293 +L L ++ ++ + L D LFRP++VWS +F ++++ S ++N Sbjct: 222 SGKILDALAGIVLLVVTVVLMDFFLFRPIVVWSQRFSIDQSASPAGETRSIFREWLMESN 281 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 L + ++ R L + P+ + + VS +L + ++ Sbjct: 282 ALALSRRVLSSLLEAAMASLYAFLRRLPIAFPPGPDGNGR-GVFRWVSPVLGVSSLFLLG 340 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +A + + + + + +M R++ ++ +PV ++ P Sbjct: 341 ILAYSGVESMKRALASGVPWDGLSELPLDMVYSMLRLLAGYFLSLCWTVPVAWYVFVHPR 400 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + + P AQ++A+ PA FP ++ V + NL LL++ G QWY+LFN++AGA Sbjct: 401 LMRTVMPVAQVMASVPATALFPFIIVLVVRTTHSMNLASILLLLSGMQWYLLFNLLAGAG 460 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 FPN+ +E A + + G + R I LP +FP VTG+ITA GG WNA IVSE + + Sbjct: 461 TFPNELREAALTMGVRGRLFLRKIFLPFLFPSIVTGSITAFGGGWNALIVSEYVVYDQKN 520 Query: 534 LRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G+GA++ T G+ +V+ +L++ V+ LNRF W PLY T L Sbjct: 521 YSVRGIGAFLDRVTYGSGNEILIVVSLLMLTVVVVTLNRFFWTPLYERVTTRYGL 575 >gi|91205578|ref|YP_537933.1| ABC-type anion transport system permease component [Rickettsia bellii RML369-C] gi|91069122|gb|ABE04844.1| ABC-type anion transport system permease component [Rickettsia bellii RML369-C] Length = 389 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 174/391 (44%), Positives = 246/391 (62%), Gaps = 3/391 (0%) Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 MMSMSGGWFF+VASE +V+G I +PGIGSYIA AI E+D+++I+Y+++TM VI LYD Sbjct: 1 MMSMSGGWFFLVASETVVIGGNTISVPGIGSYIAKAIYEKDIISIIYSVITMFIVIILYD 60 Query: 257 QLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKL 316 Q++FRP+IVW++KFR E S V+ LF+KTNF+ + N Sbjct: 61 QIIFRPLIVWADKFRYENIVKACAPKSMVVDLFKKTNFITIYIAKIISIIFIPCNFF--- 117 Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 + I + + + ++ I W+ + +AI A + ++ + + Sbjct: 118 INNITKIISNLLSKLYIIFIKPIPNLLIAIIWYGCLACLAIYAANKCYDFVKTTISLSEF 177 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L VI LG T+ RV+ ++I+A IIW+P+G++IG + K+ P Q+ +AFPAN FP Sbjct: 178 LLVIKLGFFTLLRVITMVILALIIWVPIGVFIGLNSSYTEKMMPVIQIASAFPANFLFPF 237 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV +S+Y+LNPN+ LS LMI GTQWYILFNVIAG SAFP D KE A+ F + GW WW+ Sbjct: 238 VVIFISHYNLNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKN 297 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 IILPGIFP+ VTG ITA GGAWNASIV+E+ SWG++ + TGLG YI + + V Sbjct: 298 IILPGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSRVA 357 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +GV++M +V+ ++R +W PLY +L Sbjct: 358 IGVVVMSLYVIVISRLVWRPLYNLSVSKSKL 388 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 87/198 (43%), Gaps = 4/198 (2%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 T LR+++ ++++L+ + ++P++ I + P F V++ + Sbjct: 185 FFTLLRVITMVILALIIWVPIGVFIGLNSSYTEKMMPVIQIASAFPANFLFPFVVIFISH 244 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + +A F + W + F++ P DL+E + FR+ GW + + + Sbjct: 245 YN----LNPNIALSFLMILGTQWYILFNVIAGTSAFPADLKESANIFRVKGWLWWKNIIL 300 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P P +V ++ + G W + +E++ G+ I G+G YI A D + + Sbjct: 301 PGIFPHIVTGVITAYGGAWNASIVAEIVSWGNVRISATGLGLYITNAANASDYSRVAIGV 360 Query: 246 LTMLGVIFLYDQLLFRPM 263 + M + + +L++RP+ Sbjct: 361 VVMSLYVIVISRLVWRPL 378 >gi|170290357|ref|YP_001737173.1| binding-protein-dependent transport systems inner membrane component [Candidatus Korarchaeum cryptofilum OPF8] gi|170174437|gb|ACB07490.1| binding-protein-dependent transport systems inner membrane component [Candidatus Korarchaeum cryptofilum OPF8] Length = 541 Score = 314 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 170/538 (31%), Positives = 282/538 (52%), Gaps = 23/538 (4%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L LP YA + LRM+ A + SL+F+ LAAK+ + +++P+LD++QS+PIL F Sbjct: 13 LSYFLLPVYALLSLLRMIIAYLFSLIFSLSIGILAAKNEKAEHIIIPLLDVLQSVPILSF 72 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L +++F+NL+ G IGAE+++IF IFTSQVWNMTF +Y+++ IPRDLEE+ R +R+ Sbjct: 73 LPIAIIFFINLF-GPYIGAEISSIFLIFTSQVWNMTFGVYEAVKLIPRDLEEMVRVYRIG 131 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P +M L++N MS GGWFF+ ASE+I +G+ IPLPGIGS +AL++ E Sbjct: 132 KFLYLRKILLPATMTKLIYNSAMSWGGGWFFLYASEIISLGNAQIPLPGIGSLLALSLAE 191 Query: 236 QDL---LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292 +AIL ++TM V F Y ++RP++ WS F+ E + G + Sbjct: 192 SPPRIDIAILSVLITMFLVSFTY-LFIWRPLMEWSENFKYEYSAGEIKRKRVF-----EI 245 Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 +R + +FF L ++ R F E + + + Sbjct: 246 PRVRIPPFLYRSFFRSLRYILRLPIRNYVAGFVSFVERRAGIIKKGT-----FLLLILFI 300 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 A+ IA + + + ++ ++ RV+ +++I+ IPV + +G Sbjct: 301 AYSAMKIAPHITLEMPSSEYMGEPDLILIASLNSIRRVLTVLLISLSWTIPVSLLVGRGR 360 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVV--SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 H + ++ A+FP V +P +V + + +L +FG Q+Y+LFN +A Sbjct: 361 HWDEFML-LFEIAASFPIPVLWPFLVKYIVLPLGDEGFEIAAIMLALFGAQFYVLFNSLA 419 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G + +D +E+ F I G + R +++PG+FP VTG ITA GGAWN+ IV+E G Sbjct: 420 GVKSISSDLEEMRKVFLIRGSLYLRKLVIPGMFPSIVTGLITAWGGAWNSLIVAEYIKVG 479 Query: 531 HIHLRT----TGLGAYIA-ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + + GLG ++ + ++G V+ ++ V+ +NR W LY Y + Sbjct: 480 NEVFPSKRAQYGLGTLLSIAAWDRGDISSVIFITAVLTLIVITVNRAFWRFLYDYSAK 537 Score = 99.6 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 11/251 (4%) Query: 31 IINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 ++ IL + I +P + + + + + R+L+ ++ISL +T + Sbjct: 294 LLLILFIAYSAMKIAPHITLEMPSSEYMGEPDLILIASLNSIRRVLTVLLISLSWTIPVS 353 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L + R ++ + +I S PI F V Y + P G E+AAI Sbjct: 354 LLVGRGRHWDEFML-LFEIAASFPIPVLWPFLVKYIV--LPLGDEGFEIAAIMLALFGAQ 410 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + F+ + +I DLEE+ + F + G L +P P +V ++ + G W + Sbjct: 411 FYVLFNSLAGVKSISSDLEEMRKVFLIRGSLYLRKLVIPGMFPSIVTGLITAWGGAWNSL 470 Query: 208 VASEMIVVGDTVI----PLPGIGSYIALA-IKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 + +E I VG+ V G+G+ +++A D+ ++++ + ++ ++ +R Sbjct: 471 IVAEYIKVGNEVFPSKRAQYGLGTLLSIAAWDRGDISSVIFITAVLTLIVITVNRAFWRF 530 Query: 263 MIVWSNKFRLE 273 + +S KFR+E Sbjct: 531 LYDYSAKFRVE 541 >gi|170703959|ref|ZP_02894622.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] gi|170131130|gb|EDS99794.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] Length = 334 Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 166/340 (48%), Positives = 224/340 (65%), Gaps = 7/340 (2%) Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M VI YDQ LFRP+I W++KFR+E T SW+L L R+T + + + FF+ Sbjct: 1 MTVVILAYDQFLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFA 60 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + +L + G +RF P+ ++ S +DI W V I W+ + ++ Sbjct: 61 KAARIPLRLPLS-GTMRFTLPK------VEKKASRTVDIAWSGFVLIGTAYIVWRVVSFV 113 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 T DV +V+ LG IT+ RVVVLI IAS+IW+P+G+ IG RP ++ K+QP AQ LAA Sbjct: 114 ATGVTMADVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAA 173 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FP+ V ++ +HLNP++WLS L++ GTQWYILFNVIAGA+++PND++E A++F Sbjct: 174 FPANLLFPVFVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFR 233 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 I GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLGAYIA++T Sbjct: 234 IRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTT 293 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G FP+++LG+ +M FV NR LW PLY + LRL Sbjct: 294 AAGDFPKIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRL 333 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 4/212 (1%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 DV + T LR++ + I+ + L RL L P+ + + P Sbjct: 121 DVGHVLVLGLITLLRVVVLITIASVIWVPIGVLIGLRPRLAEKLQPLAQFLAAFPANLLF 180 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 F+ + + ++ I W + F++ + P D E + +FR+ G Sbjct: 181 PV----FVIVIARFHLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAATNFRIRG 236 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 WQ + +P P V + + G W + SE + G T I G+G+YIA Sbjct: 237 WQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGTTKIEAHGLGAYIAQTTAAG 296 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 D I+ + M + L+++LL+RP+ ++ Sbjct: 297 DFPKIILGIAVMSLFVTLFNRLLWRPLYAFAE 328 >gi|170703452|ref|ZP_02894222.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] gi|170131637|gb|EDT00195.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] Length = 333 Score = 312 bits (800), Expect = 9e-83, Method: Composition-based stats. Identities = 157/340 (46%), Positives = 214/340 (62%), Gaps = 8/340 (2%) Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 M VI YDQ LFRP++ W++KFR+E T SW+L + R+T+ + Sbjct: 1 MSVVILAYDQFLFRPLVAWADKFRMENTASGDAPQSWLLDMMRRTHLIH-------QLLV 53 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 P + + R + S + S + DI W V V + +AW+ + ++ Sbjct: 54 PAGWLLSQAARIPLRAPSRNDARA-RAASVRGSSRIGDIAWGTFVILVTVYVAWRVVSFV 112 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 T +V +V+ LG IT+ RV+VLI IAS++W+P+G+ IG RP ++ KIQP AQ LAA Sbjct: 113 ATGVTTGEVGHVLVLGLITLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAA 172 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 FPAN+ FP+ V + ++HLN ++WLS L++ GTQWYILFNVIAGA ++PND+KE +F Sbjct: 173 FPANLLFPVFVIAIVHFHLNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFR 232 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 I GW+WWR ILPGIFPYYVTGAITA GGAWNASIVSE WG + GLG+YIA++T Sbjct: 233 IRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTT 292 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G FP+++LG+ +M FV NR LW P+Y Y LRL Sbjct: 293 AAGDFPKIILGIAVMSLFVTLFNRLLWRPMYAYAESRLRL 332 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 4/201 (1%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LR+L + I+ + L L + P+ + + P V+ ++ + Sbjct: 131 TLLRVLVLIAIASVVWVPLGVLIGLRPALAEKIQPLAQFLAAFPANLLFPVFVIAIVHFH 190 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + A++ I W + F++ + P D +E +++FR+ GWQ + +P Sbjct: 191 ----LNADIWLSPLIVLGTQWYILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPG 246 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 P V + + G W + SE + GDT + G+GSYIA D I+ + Sbjct: 247 IFPYYVTGAITASGGAWNASIVSEFVQWGDTKVVAHGLGSYIAQTTAAGDFPKIILGIAV 306 Query: 248 MLGVIFLYDQLLFRPMIVWSN 268 M + L+++LL+RPM ++ Sbjct: 307 MSLFVTLFNRLLWRPMYAYAE 327 >gi|251772337|gb|EES52905.1| probable binding-protein-dependent transport systems inner membrane component [Leptospirillum ferrodiazotrophum] Length = 571 Score = 311 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 169/574 (29%), Positives = 282/574 (49%), Gaps = 15/574 (2%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R ++ L +++ + +L + VP + D+ LP + +R+ Sbjct: 7 RRLSFLWPTLLGLVIFSGVVLLFSRSAPSGVPVIPRE------DLRDLPGDILHSLVRLF 60 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A ++SL F + Y AA +R +L+P+LDI+QSIP+LGF V+ + L+P +G Sbjct: 61 LAYLLSLSFAYAYGLAAALTRLGPRLLIPVLDILQSIPVLGFFPAVVLVMVPLFPTTHMG 120 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A+I I TS WNM F++Y+S+ P +L ++ R R W VP ++P +V Sbjct: 121 VEAASIVLIATSMAWNMAFAVYESVRTAPPELTDLFRGIRAPAWLWALRFLVPVTLPKVV 180 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 +N ++S + GW+F++A EMI +G LPG+GS++ + ++ L + ++ + Sbjct: 181 YNSVLSWTAGWYFLIACEMIALGPVHYELPGLGSFLVGSTEKGHFGEALLGIGALVVTVM 240 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPA-DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 + D L+FRP + WS+ FRL P S V L +++L S + + Sbjct: 241 ILDLLVFRPFLAWSHNFRLGEVESHTPRISSPVYDLLAGSSWLGQFRSSVSDMAAGFFRR 300 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + ++ R R L L L V G Q I Sbjct: 301 ISRVPRRRQTFRDSSALRLLGLLLLGFFGGYLFTESLYAGVRVVTGWINQGI-------P 353 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 ++ + + + R+VV +++ + +PV W+ P +S + P A+++A+ PA Sbjct: 354 WRSLAELPADLLYSSLRLVVAYLLSLLWTLPVAYWVFRTPRLSRIVFPLAEIMASVPATA 413 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 FP V+ V + + NL LL++ G QWY+LFN+++G FP + +EV+ +F I Sbjct: 414 LFPFVIVLVVTHLHSMNLASILLLMSGMQWYLLFNLLSGVGTFPAELREVSLTFGIRQGL 473 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + R + LP + P VTG+ITA GG WNA IVSE + GLGA++ +T +G+ Sbjct: 474 FIRKVFLPFLLPSLVTGSITAFGGGWNALIVSEYVVYAKKDYGVDGLGAFLDRATYQGAH 533 Query: 553 P-EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 P +V +L+M V+A NRF W PLY T+ Sbjct: 534 PVLIVAALLVMTAAVVAANRFFWIPLYERVTQRY 567 >gi|308180844|ref|YP_003924972.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046335|gb|ADN98878.1| nitrate ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 454 Score = 303 bits (776), Expect = 6e-80, Method: Composition-based stats. Identities = 142/466 (30%), Positives = 241/466 (51%), Gaps = 18/466 (3%) Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 M L+P V+G E AIF +FT+Q WN+ ++YQSL P DL V++ F + WQ+FW L Sbjct: 1 MGLFPNNVLGVEAVAIFGVFTAQAWNIMLALYQSLRVTPEDLMTVAKQFGCNSWQRFWRL 60 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASE---MIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 ++ P ++WN+++S S WF +VA E ++V + + LPGIGSYI +A+ + A Sbjct: 61 EFLYATPSILWNIVISQSAAWFALVACEQATIVVPKNETLVLPGIGSYIQIALDTANFGA 120 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL-ERTTGIYPADSWVLYLFRKTNFLRFIG 299 ++ A++ ++ + L + +F+P+I + ++ T P S V L + Sbjct: 121 VINAVIALVICVLLVNVFIFQPLIKGTAHYKYGTSTDSQLPQQSQVYDLMVMAKVPLLVK 180 Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 + K + LG R R+ ++W V Sbjct: 181 RLHRHIRYWWLYGAPKQWQKLGFSRII------------RILKKYTVYWRIAWWLVIAVG 228 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ ++ + + ++ + +T RV++ ++++++I+IP+ +W+ IQ Sbjct: 229 LYRLGVLLIKYLDWINLSVLFKWTFLTTSRVLIAVLLSALIFIPLAVWVASNARRLKLIQ 288 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L + PA+++ P+V ++ + W+ L++ GTQWY FN+IAG A P+D Sbjct: 289 PVGQVLGSIPADIYIPIVALMITLTGTTQHWWVIPLIMTGTQWYFFFNIIAGYLAIPSDI 348 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 K+V + FH++GWRWW + ++P +FP ++T I A G AWNA I +E+ SWG TGL Sbjct: 349 KDVVNIFHLSGWRWWTHFLIPSLFPSFITAIINAAGAAWNADIAAELISWGTHQYAVTGL 408 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 GAYIA+ + P GVLI+C V +W PLY + R Sbjct: 409 GAYIAQ--NINNKPAEATGVLIICVIVGLCVVLIWQPLYRFAERRF 452 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 6/214 (2%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 +++ L ++ TT R+L A+++S L A A + R ++ P+ ++ SIP + Sbjct: 243 INLSVLFKWTFLTTSRVLIAVLLSALIFIPLAVWVASNARRLKLIQPVGQVLGSIPADIY 302 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + + + I I T W F++ IP D+++V F LS Sbjct: 303 IPIVALMITLTGTTQ----HWWVIPLIMTGTQWYFFFNIIAGYLAIPSDIKDVVNIFHLS 358 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 GW+ + + +P P + ++ + W +A+E+I G + G+G+YIA I Sbjct: 359 GWRWWTHFLIPSLFPSFITAIINAAGAAWNADIAAELISWGTHQYAVTGLGAYIAQNINN 418 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 + A +L + ++ L L+++P+ ++ + Sbjct: 419 K--PAEATGVLIICVIVGLCVVLIWQPLYRFAER 450 >gi|206895688|ref|YP_002246654.1| ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] gi|206738305|gb|ACI17383.1| ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] Length = 499 Score = 287 bits (736), Expect = 3e-75, Method: Composition-based stats. Identities = 153/530 (28%), Positives = 263/530 (49%), Gaps = 36/530 (6%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L A +T R+ A +SL F Y A+ R +++ ILDI+QS+PILGF Sbjct: 2 QLISAALWSTYRIFVAYFLSLAFGIFYGVSASSGPRREKIMIAILDILQSVPILGFFPVA 61 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + +F+ ++ G+ IG ELAAIF IFTSQ WN+ F +Y+++ +PR+L EV ++F S Sbjct: 62 IAFFVAVFRGQRIGLELAAIFLIFTSQAWNIAFGVYETVKTLPRELVEVGKAFNFSKTFT 121 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P +P +V+N +SM+ GW+F++ASE+I +G + LPG+GS + + + ++L Sbjct: 122 IQRIYLPAMVPTIVFNSGVSMANGWYFLMASEIITLGSQEVKLPGLGSSMMNYLAQGNIL 181 Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER--TTGIYPADSWVLYLFRKTNFLRF 297 ++ + T++ + L L+FRP++ WS F+ T +P + VL+ F K + Sbjct: 182 GVVMCIGTIVLINALLQVLIFRPLVKWSELFQYNAVGTAPEWPTVADVLFDFGKALKVDT 241 Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + + +++S + ++ + + Sbjct: 242 VLVKLVSL------------------------------GTKKLSAVAKYVFYVIGAALVG 271 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G+ + + + + +T RVV ++IA ++ +P I + Sbjct: 272 GLGYLIFWLFSPPYPSNILSQIPAALTVTTMRVVAAVVIAVLLALPFVIRSVKNVAAAQN 331 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I A +L + PA VF+P +V+ ++ P LL++ G+ WY LFN+ GA P Sbjct: 332 IYSLASILGSIPAVVFYPPIVALGGRAYMEP--LSILLLLTGSFWYALFNMSKGAMLLPG 389 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 E+A F+I GW +++ I++P I P +TGA+TA GGAWNASIV+E +G Sbjct: 390 VLTEMAQVFNIKGWLYYKNILIPAILPPLITGALTAWGGAWNASIVAEHVQFGDKVYSIP 449 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G+GA + +ST ++L VL M ++ +N W P Y + Sbjct: 450 GIGALLVQSTA--DTKALLLIVLSMTALIVLVNMLFWRPWYSKAAEKYNI 497 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 17/238 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++G + L+ + P +I+ +P L V TT+R+++A+VI++L Sbjct: 267 AALVGGLGYLIFWLFSPPYPSNILSQIPAALTV---------TTMRVVAAVVIAVLLALP 317 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 + + K+ + + I+ SIP + F V G E +I + T Sbjct: 318 FVIRSVKNVAAAQNIYSLASILGSIPAVVFYPPIVAL------GGRAYMEPLSILLLLTG 371 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 W F+M + +P L E+++ F + GW + + +P +P L+ + + G W Sbjct: 372 SFWYALFNMSKGAMLLPGVLTEMAQVFNIKGWLYYKNILIPAILPPLITGALTAWGGAWN 431 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 + +E + GD V +PGIG+ + + D A+L +L+M +I L + L +RP Sbjct: 432 ASIVAEHVQFGDKVYSIPGIGALLVQSTA--DTKALLLIVLSMTALIVLVNMLFWRPW 487 >gi|284173141|ref|ZP_06387110.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus solfataricus 98/2] gi|261600964|gb|ACX90567.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus solfataricus 98/2] Length = 536 Score = 286 bits (732), Expect = 7e-75, Method: Composition-based stats. Identities = 117/533 (21%), Positives = 225/533 (42%), Gaps = 28/533 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + +S++ + +A K++ + + +L++ +S+P++ F +++F+ Sbjct: 11 SLASLGRVFLTIGLSIITGWFLGYIAIKNKAFENIYISVLEVFESVPVISFFPVVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G +G ELA F +FT+ VWN+ +YQ+ +P DL EVS ++RL K L Sbjct: 71 YR-IGGYLGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+S P + N++ S + +F++ SE+ +G + + GIG+ IA Q+ L Sbjct: 130 IPYSWPRIAANLIPSFADAFFYITVSEVFSIGSSSYHVFGIGTIIAAFTASQEYNLALEG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + +I ++ LL R T Y D+ + R +R+ S N Sbjct: 190 LGVLAILITIFTYLLRR---------FANYTVSKYGLDTEIKVAKRGRMRIRYTTRMS-N 239 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P K + R E L L I + G+ + A+ +I Sbjct: 240 TIAPFVKLSKYVTRIGSRTTISEEETRRNLPW-----RYLGIGISVFLLGLLVYGAFSTI 294 Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + + V++ I RV+ + I++ + I +G +I + + P Sbjct: 295 SSVPKSVLLYLISNTPNVLFNLLIDYVRVLFIAIVSLVFSIFLGYFIATHERVEGMLIPI 354 Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q A+FPA +FPL++ + ++ LL T +Y+ ++ G Sbjct: 355 IQAYASFPAPAYFPLLLMATISFIHSVFGSWTNEFYVILLGFISTFYYVFYSYWLGIKNM 414 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHI 532 PN + E+ +++ + W+ RY+I+P FPY + G + AW + E G+ Sbjct: 415 PNQYWEIMKNYNFSFWQKLRYVIVPSTFPYIIAGLSSTINSAWGGLAIGEYWTNIVNGYT 474 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + G+ IA +T G+ P LI V+ + F + Sbjct: 475 LQVSHGIMKNIAVATANGNVPLAAWDSLIFGIVVIIYSIFFTRKMMDLAREKY 527 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 3/204 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 +++ ++ ++ RV + I ++ I +G + ++ + P FF Sbjct: 3 EIVIILLASLASLGRVFLTIGLSIITGWFLGYIAIKNKAFENIYISVLEVFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ Y +L L + L+ W I + P+D EV+ ++ + Sbjct: 63 PVVLIFFVYRIGGYLGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +P +P I + A+ VSEV S G G+G IA T Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAFFYITVSEVFSIGSSSYHVFGIGTIIAAFTASQE 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575 + + G+ ++ + L Sbjct: 183 YNLALEGLGVLAILITIFTYLLRR 206 >gi|325967864|ref|YP_004244056.1| binding-protein-dependent transporters inner membrane component [Vulcanisaeta moutnovskia 768-28] gi|323707067|gb|ADY00554.1| binding-protein-dependent transport systems inner membrane component [Vulcanisaeta moutnovskia 768-28] Length = 557 Score = 284 bits (727), Expect = 3e-74, Method: Composition-based stats. Identities = 116/539 (21%), Positives = 232/539 (43%), Gaps = 20/539 (3%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T R+ +++S++ + + AAK+ + + I ++++P++ F +++F+ Sbjct: 17 TLATFGRVALTIILSIVLGWFFGYAAAKNGLFERIFLSITQTLEAVPVITFFPIVLIFFV 76 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ Y+++ P+ LE+ + L W KF YL Sbjct: 77 KS-IGGYIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMLNLGFWGKFRYLY 135 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +MP + N+++S + F++V SE++ +G T + GIG+ IA + A Sbjct: 136 IPVTMPRVAGNVLVSFADALFYIVVSEVVTLGTTQYSVFGIGALIASWTSRSEWTAAFTG 195 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD-------SWVLYL-FRKTNFLR 296 + ++ ++ + RP + W+ K+ + + S V L R +LR Sbjct: 196 LGVLVVMVTSVLFGILRPFVDWAVKYSYDPFMEVTRTRVRRPIVTSRVRSLAARNMRYLR 255 Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356 + R + R P + ++R + + + + + Sbjct: 256 RVVAVEDAIMPIFVKASSYAVRHRLLSR---PRPRNIITESERYIGIGIVIFVIGLITYS 312 Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 I +W++ + + Y+ L ++ + FRV+++ + A + IPV + + S Sbjct: 313 IYESWKTTWVPIINNLYEYGLLYLYYLGLDWFRVILVTVAAILTAIPVNYLMVTHRRVES 372 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYY-------HLNPNLWLSLLMIFGTQWYILFNVI 469 + P + LA+ P + + PL+ Y H++ + + ++ T WY+++N+ Sbjct: 373 ILLPVLEDLASIPVSAYLPLIAIPFITYLAVSLGSHISLEILVFVVAYLSTAWYVIYNMY 432 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G P +VA + ++ W+ R + +PG P +TG + G W V+E Sbjct: 433 VGMKTIPRSLWDVAENLRLSTWQKLRRLAIPGAMPATITGLASTAGSTWGGLEVAEYIQG 492 Query: 530 -GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G A + T G+ + LI+ V+ L+ FLW L+ RL Sbjct: 493 LNGQVYMVHGYTALMDYYTAIGNIVGLEAMSLILGINVVLLSVFLWRKLFRLARERYRL 551 Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 5/209 (2%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM---NL 126 R++ V ++L L RR+ +L+P+L+ + SIP+ +L + F+ + Sbjct: 344 FRVILVTVAAILTAIPVNYLMVTHRRVESILLPVLEDLASIPVSAYLPLIAIPFITYLAV 403 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 G I E+ + S W + ++MY + IPR L +V+ + RLS WQK L +P Sbjct: 404 SLGSHISLEILVFVVAYLSTAWYVIYNMYVGMKTIPRSLWDVAENLRLSTWQKLRRLAIP 463 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI-VVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MP + + + W + +E I + V + G + + +++ + Sbjct: 464 GAMPATITGLASTAGSTWGGLEVAEYIQGLNGQVYMVHGYTALMDYYTAIGNIVGLEAMS 523 Query: 246 LTMLGVIFLYDQLLFRPMIVWS-NKFRLE 273 L + + L L+R + + ++RLE Sbjct: 524 LILGINVVLLSVFLWRKLFRLARERYRLE 552 Score = 93.1 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 75/212 (35%), Gaps = 3/212 (1%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + VL T RV + II++ ++ G Q L A P Sbjct: 7 WSIVLVAFLATLATFGRVALTIILSIVLGWFFGYAAAKNGLFERIFLSITQTLEAVPVIT 66 Query: 433 FFPLVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 FFP+V+ ++ L + L+ W I P ++ A ++ Sbjct: 67 FFPIVLIFFVKSIGGYIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMLNLG 126 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 W +RY+ +P P + + A +VSEV + G G+GA IA T + Sbjct: 127 FWGKFRYLYIPVTMPRVAGNVLVSFADALFYIVVSEVVTLGTTQYSVFGIGALIASWTSR 186 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 + G+ ++ V ++ + P + Sbjct: 187 SEWTAAFTGLGVLVVMVTSVLFGILRPFVDWA 218 >gi|332797789|ref|YP_004459289.1| ABC-type anion transport system, duplicated permease component [Acidianus hospitalis W1] gi|332695524|gb|AEE94991.1| ABC-type anion transport system, duplicated permease component [Acidianus hospitalis W1] Length = 544 Score = 282 bits (723), Expect = 9e-74, Method: Composition-based stats. Identities = 117/544 (21%), Positives = 226/544 (41%), Gaps = 24/544 (4%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 D+ T R+ + +++ ++ ++ KS+ + + + +I +S+P++ F Sbjct: 2 FDIWLAIYDTLLTLGRVFIDIAFAIVTGWLLGYISLKSKTFENIYISLSEIFESVPVISF 61 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 +++F+ G +G ELA +F +FT+ VWN+ +YQ+ +P ++EEV R++R Sbjct: 62 FPVVLIFFVFSIGGS-LGIELAVLFLVFTAVVWNIWMGIYQAFKTVPSEMEEVIRNYRFG 120 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 K L +PFS+P + N++ S + F++ SE+ +G +PGIG+ IA E Sbjct: 121 FVGKMLRLYIPFSIPRIAANLIPSFADALFYITVSEVFSIGTKCYEVPGIGTLIAQYTAE 180 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNF 294 D +YA++ +LG+ LL R +S K+ L+ L F++ F Sbjct: 181 GDYTDAIYALI-VLGIFTTTITLLLREFAEYSVKKYGLDTEAS--------LKSFKRGRF 231 Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 N + K L + R + + + +++ + ++ Sbjct: 232 RIRYSARLSNSKGVFAKLGKYLTKPPYFTRQNRLMDEEEEAKKRKIPINMISAGIGILLL 291 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM----FRVVVLIIIASIIWIPVGIWIGF 410 + I S+ V T+ ++ + I + RV V+ +++ I + VG +I Sbjct: 292 IIILYGAYSVIISVKPSTWSYLISTLPQDLIDLGADYLRVAVISLMSFIFAVFVGYYIAR 351 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYI 464 + I P Q +AFPA +FPL+ + ++ LL T +Y+ Sbjct: 352 HTNADRAIVPIIQTFSAFPAPAYFPLLYGFTYTYVSSIFGPFTNEFYVLLLGFISTFYYV 411 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 ++ G P+++ E+ + + W R IILP FPY + G + AW + Sbjct: 412 FYSFWIGVKNLPSEYWELMDNLKLGFWTKMRKIILPATFPYIIAGMSSTINSAWGGLAIG 471 Query: 525 EV---ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 E TGL +A + +G+ V LI V+ + + Sbjct: 472 EYWPDIYQSQTLEVRTGLMKALAVADNQGNLALVGWLSLIFAIIVVIYSVLFTRKMMDLA 531 Query: 582 TRCL 585 + Sbjct: 532 RKKY 535 >gi|315427282|dbj|BAJ48894.1| sulfonate/nitrate/taurine ABC transporter permease [Candidatus Caldiarchaeum subterraneum] Length = 517 Score = 282 bits (722), Expect = 1e-73, Method: Composition-based stats. Identities = 150/522 (28%), Positives = 251/522 (48%), Gaps = 24/522 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + LRM +A+++S+LF+ V T A ++ V VP+LDI+QSIPILGF + F Sbjct: 17 SFLRMAAALIVSVLFSIVVGTAAGVNKSFEKVAVPVLDILQSIPILGFFPVAIQVFYAAS 76 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P V GAELAAIF IFTSQVWN+TF++Y+S I +L +V+ S R+S +++F ++ +P Sbjct: 77 P--VFGAELAAIFLIFTSQVWNITFAVYESTRFIQPELLDVANSMRMSAFERFRHIYLPA 134 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P +V N S + G FF+V +E++ GD + L G+G+ ++ DLL I+ +L Sbjct: 135 CLPRIVRNFQPSWANGMFFIVGAEILAFGDVELKLFGVGTLVSEFAVAGDLLGIITVLLV 194 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 ++ + + L+F P+ + T G P L R+ F++ + + Sbjct: 195 LVAATIMVNFLVFIPLG------TMFETAGPPPPG-----LLRRFAFIKKLAKPFQTTLA 243 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + + R++ + V ++ + + +AI + G + Sbjct: 244 TPVISFFEYQRSVSGLVNRVS------VLGSLVRNLIFLILIGFLATLAITRGNEFFGSL 297 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V ++ + RV+ + + IP + I RP +S+ + Q++A+ Sbjct: 298 YQTLGRVGVDNLLSSAVFSFVRVMGAVGFSVAWSIPAAVAIARRPQLSTAVTTVFQVVAS 357 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P + +PL P L ++++ TQWY+ F V+AG P EVA Sbjct: 358 IPVTIVYPLF---AETLKDQPELRAFVMILAATQWYVFFQVLAGLKNIPRSELEVADMLQ 414 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT--TGLGAYIAE 545 + W R + LP P +TG ITA GGAWN +V+E G + T GLG +++ Sbjct: 415 LKTWTRIRMVYLPRALPALITGCITAAGGAWNGLVVAERLVLGDLVAETDLPGLGKLLSQ 474 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 T G V +++M V+ +NRF W LY L++ Sbjct: 475 LTYAGDLLGSVSVLIVMSSIVVLMNRFFWKKLYDLVASKLKI 516 Score = 98.1 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 11/243 (4%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L F+++IG + L I + + V +L A + +R++ A+ S+ + Sbjct: 273 LIFLILIGFLATLA--ITRGNEFFGSLYQTLGRVGVDNLLSSAVFSFVRVMGAVGFSVAW 330 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + A A+ +L + + ++ SIP+ + EL A I Sbjct: 331 SIPAAVAIARRPQLSTAVTTVFQVVASIPVTIVYPLFAETLKDQ-------PELRAFVMI 383 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + W + F + L NIPR EV+ +L W + + +P ++P L+ + + G Sbjct: 384 LAATQWYVFFQVLAGLKNIPRSELEVADMLQLKTWTRIRMVYLPRALPALITGCITAAGG 443 Query: 203 GWFFVVASEMIVVGD--TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 W +V +E +V+GD LPG+G ++ DLL + ++ M ++ L ++ + Sbjct: 444 AWNGLVVAERLVLGDLVAETDLPGLGKLLSQLTYAGDLLGSVSVLIVMSSIVVLMNRFFW 503 Query: 261 RPM 263 + + Sbjct: 504 KKL 506 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 78/196 (39%), Gaps = 2/196 (1%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +I++ + I VG G P +L + P FFP+ + Sbjct: 15 LVSFLRMAAALIVSVLFSIVVGTAAGVNKSFEKVAVPVLDILQSIPILGFFPVAIQVFYA 74 Query: 444 YH--LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 L L+ W I F V + +VA+S ++ + +R+I LP Sbjct: 75 ASPVFGAELAAIFLIFTSQVWNITFAVYESTRFIQPELLDVANSMRMSAFERFRHIYLPA 134 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P V + + +E+ ++G + L+ G+G ++E G ++ +L+ Sbjct: 135 CLPRIVRNFQPSWANGMFFIVGAEILAFGDVELKLFGVGTLVSEFAVAGDLLGIITVLLV 194 Query: 562 MCCFVLALNRFLWHPL 577 + + +N ++ PL Sbjct: 195 LVAATIMVNFLVFIPL 210 >gi|307596035|ref|YP_003902352.1| binding-protein-dependent transport systems inner membrane component [Vulcanisaeta distributa DSM 14429] gi|307551236|gb|ADN51301.1| binding-protein-dependent transport systems inner membrane component [Vulcanisaeta distributa DSM 14429] Length = 554 Score = 279 bits (715), Expect = 7e-73, Method: Composition-based stats. Identities = 117/539 (21%), Positives = 226/539 (41%), Gaps = 20/539 (3%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T R+ +V+ ++ + AAKS V + I ++++P++ F +V+F+ Sbjct: 14 TLATFGRVTLTIVLGIVLGWFLGYAAAKSGLFERVFLSITQTLEAVPVITFFPIVLVFFV 73 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ Y+++ P+ LE+ + F LS W +F YL Sbjct: 74 KS-IGGYIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMFNLSFWGRFRYLY 132 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +MP + N+++S + F++V SE+I +G T + GIG+ IA + + + Sbjct: 133 IPVTMPRVAGNVLVSFADALFYIVVSEVITLGTTQYSVFGIGALIASWTSKGEWVPAFVG 192 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD-------SWVLYL-FRKTNFLR 296 + ++ ++ + RP + W+ K+ + + S V L R ++R Sbjct: 193 LGILVVMVTAVLFGVLRPFVNWAVKYSYDPFMEVTRTRIRRPIITSRVRSLAARNMRYIR 252 Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356 + R ++R P + ++ + ++ Sbjct: 253 RVVAVEDAIMPIFIRASSYAVRHRLLVR---PRPRNIITRTEKYIGIGVATAIIILLAYL 309 Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 I +WQ + + Y L ++ + R+ ++ + I IP+ + + + Sbjct: 310 IYSSWQVTWVPIINNLYDHGLLYLYYLGLDWLRIALVTAASIITAIPINYLMVTHRRVEA 369 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYY-------HLNPNLWLSLLMIFGTQWYILFNVI 469 + P + LA+ P + + PL+ + Y H++ L + L+ T WY+++N+ Sbjct: 370 ILLPILEDLASIPVSAYLPLIAIPFTTYVATTLGLHVSLELLVFLVAYLSTAWYVIYNMY 429 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G P +VA + + W+ R + +PG P +TG + G W V+E Sbjct: 430 VGMKTIPRSLWDVAENLRLGTWQKLRRLAIPGAMPATITGLASTIGSTWGGLEVAEYIQG 489 Query: 530 -GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G A + T G+ + LI+ V+ L+ FLW L+ RL Sbjct: 490 LNGQVYMVHGYTALMDYYTAVGNVVGLEAMSLILAINVILLSVFLWRRLFKLARERYRL 548 Score = 99.2 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 5/208 (2%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLY 127 R+ S++ L RR+ +L+PIL+ + SIP+ +L + F + Sbjct: 342 RIALVTAASIITAIPINYLMVTHRRVEAILLPILEDLASIPVSAYLPLIAIPFTTYVATT 401 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G + EL + S W + ++MY + IPR L +V+ + RL WQK L +P Sbjct: 402 LGLHVSLELLVFLVAYLSTAWYVIYNMYVGMKTIPRSLWDVAENLRLGTWQKLRRLAIPG 461 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMI-VVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +MP + + ++ W + +E I + V + G + + +++ + L Sbjct: 462 AMPATITGLASTIGSTWGGLEVAEYIQGLNGQVYMVHGYTALMDYYTAVGNVVGLEAMSL 521 Query: 247 TMLGVIFLYDQLLFRPMIVWS-NKFRLE 273 + + L L+R + + ++RLE Sbjct: 522 ILAINVILLSVFLWRRLFKLARERYRLE 549 Score = 93.1 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 3/212 (1%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + L T RV + I++ ++ +G Q L A P Sbjct: 4 WSIALIAFLATLATFGRVTLTIVLGIVLGWFLGYAAAKSGLFERVFLSITQTLEAVPVIT 63 Query: 433 FFPLVVSCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 FFP+V+ ++ L + L+ W I P ++ A F+++ Sbjct: 64 FFPIVLVFFVKSIGGYIGTELAVDFLVFTAVVWNIWVGEYEAIKTAPQSLEDAAEMFNLS 123 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 W +RY+ +P P + + A +VSEV + G G+GA IA T K Sbjct: 124 FWGRFRYLYIPVTMPRVAGNVLVSFADALFYIVVSEVITLGTTQYSVFGIGALIASWTSK 183 Query: 550 GSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 G + +G+ I+ V A+ + P + Sbjct: 184 GEWVPAFVGLGILVVMVTAVLFGVLRPFVNWA 215 >gi|229583288|ref|YP_002841687.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus Y.N.15.51] gi|228014004|gb|ACP49765.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus Y.N.15.51] Length = 535 Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats. Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + +S++ + +A KS+ + + +++I +S+P++ F +++F+ Sbjct: 11 SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ +YQ+ +P DL EVS ++RL K L Sbjct: 71 YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+S P + N++ S + F++ SE+ +G + + GIG+ I Q+ L Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + I ++ LL R T Y D+ + R +R+ S N Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P K + R E L L I ++ G+ + A+ +I Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294 Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + V++ I RV+ + I++ + I +G +I R + + P Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354 Query: 422 AQLLAAFPANVFFPLVVSC------VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q A+FPA +FPL+ + + ++ LL T +Y+ ++ G Sbjct: 355 IQTYASFPAPAYFPLLFTATISFIHTVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNV 414 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533 PN + E+ +++ + W RY+I+P FPY ++G + AW + E S + Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + G+ IA +T G+ P LI V+ + F + Sbjct: 475 QVSHGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L + ++ RV + I ++ I +G + ++ + P FF Sbjct: 3 EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ Y ++ L + L+ W I + P+D EV+ ++ + Sbjct: 63 PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +P +P I + A VSEV S G G+G I E T Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575 + + G+ I+ ++ L Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206 >gi|323473746|gb|ADX84352.1| ABC-type anion transport system, duplicated permease component [Sulfolobus islandicus REY15A] Length = 535 Score = 278 bits (712), Expect = 2e-72, Method: Composition-based stats. Identities = 118/532 (22%), Positives = 222/532 (41%), Gaps = 27/532 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + +S++ + +A KS+ + + +++I +S+P++ F +++F+ Sbjct: 11 SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ +YQ+ +P DL EVS ++RL K L Sbjct: 71 YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+S P + N++ S + F++ SE+ +G + + GIG+ I Q+ L Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + I ++ LL R T Y D+ + R +R+ S N Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P K + R E L L I ++ G+ + A+ +I Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294 Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + V++ I RV+ + I++ + I +G +I R + + P Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354 Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q A+FPA +FPL+ + ++ LL T +Y+ ++ G Sbjct: 355 IQTYASFPAPAYFPLLFIATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNM 414 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533 PN + E+ +++ + W RY+I+P FPY ++G + AW + E S + Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + G+ I+ +T G+ P LI V+ + F + Sbjct: 475 QVSHGIMKSISVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L + ++ RV + I ++ I +G + ++ + P FF Sbjct: 3 EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ Y ++ L + L+ W I + P+D EV+ ++ + Sbjct: 63 PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +P +P I + A VSEV S G G+G I E T Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575 + + G+ I+ ++ L Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206 >gi|15899210|ref|NP_343815.1| ABC transporter, putative [Sulfolobus solfataricus P2] gi|227826664|ref|YP_002828443.1| binding-protein-dependent transporters inner membrane component [Sulfolobus islandicus M.14.25] gi|238618750|ref|YP_002913575.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.16.4] gi|13815769|gb|AAK42605.1| ABC transporter, putative [Sulfolobus solfataricus P2] gi|227458459|gb|ACP37145.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.14.25] gi|238379819|gb|ACR40907.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.16.4] gi|323476396|gb|ADX81634.1| ABC-type anion transport system, duplicated permease [Sulfolobus islandicus HVE10/4] Length = 535 Score = 278 bits (711), Expect = 2e-72, Method: Composition-based stats. Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + +S++ + +A KS+ + + +++I +S+P++ F +++F+ Sbjct: 11 SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ +YQ+ +P DL EVS ++RL K L Sbjct: 71 YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+S P + N++ S + F++ SE+ +G + + GIG+ I Q+ L Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + I ++ LL R T Y D+ + R +R+ S N Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P K + R E L L I ++ G+ + A+ +I Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294 Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + V++ I RV+ + I++ + I +G +I R + + P Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354 Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q A+FPA +FPL+ + + ++ LL T +Y+ ++ G Sbjct: 355 IQTYASFPAPAYFPLLFTATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNM 414 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533 PN + E+ +++ + W RY+I+P FPY ++G + AW + E S + Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + G+ IA +T G+ P LI V+ + F + Sbjct: 475 QVSHGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L + ++ RV + I ++ I +G + ++ + P FF Sbjct: 3 EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ Y ++ L + L+ W I + P+D EV+ ++ + Sbjct: 63 PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +P +P I + A VSEV S G G+G I E T Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575 + + G+ I+ ++ L Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206 >gi|229578075|ref|YP_002836473.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus Y.G.57.14] gi|228008789|gb|ACP44551.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus Y.G.57.14] Length = 535 Score = 278 bits (711), Expect = 2e-72, Method: Composition-based stats. Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + +S++ + +A KS+ + + +++I +S+P++ F +++F+ Sbjct: 11 SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ +YQ+ +P DL EVS ++RL K L Sbjct: 71 YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+S P + N++ S + F++ SE+ +G + + GIG+ I Q+ L Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + I ++ LL R T Y D+ + R +R+ S N Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P K + R E L L I ++ G+ + A+ +I Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294 Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + V++ I RV+ + I++ + I +G +I R + + P Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354 Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q A+FPA +FPL+ + + ++ LL T +Y+ ++ G Sbjct: 355 IQTYASFPAPAYFPLLFTATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNM 414 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533 PN + E+ +++ + W RY+I+P FPY ++G + AW + E S + Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + G+ IA +T G+ P LI V+ + F + Sbjct: 475 QVSHGIMKSIAVATANGNVPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L + ++ RV + I ++ I +G + ++ + P FF Sbjct: 3 EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ Y ++ L + L+ W I + P+D EV+ ++ + Sbjct: 63 PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +P +P I + A VSEV S G G+G I E T Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575 + + G+ I+ ++ L Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206 >gi|229583828|ref|YP_002842329.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.16.27] gi|228018877|gb|ACP54284.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus M.16.27] Length = 535 Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats. Identities = 117/529 (22%), Positives = 219/529 (41%), Gaps = 21/529 (3%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + +S++ + +A KS+ + + +++I +S+P++ F +++F+ Sbjct: 11 SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ +YQ+ +P DL EVS ++RL K L Sbjct: 71 YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+S P + N++ S + F++ SE+ +G + + GIG+ I Q+ L Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + I ++ LL R T Y D+ + R +R+ S N Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P K + R R E + R + + S+ Sbjct: 240 TIAPFVKLSKYVTRIGS--RSASSEEETRRNLPWRYLGIGISVLLLGLLVYGALSTISSV 297 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 V + V++ I RV+ + I++ + I +G +I R + + P Q Sbjct: 298 PKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPAIQT 357 Query: 425 LAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 A+FPA +FPL+ + + ++ LL T +Y+ ++ G PN Sbjct: 358 YASFPAPAYFPLLFTATISFIHSVFGSWTDEFYVILLGFISTFYYVFYSYWLGIKNMPNQ 417 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIHLRT 536 + E+ +++ + W RY+I+P FPY ++G + AW + E S + + Sbjct: 418 YWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTLQVS 477 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 G+ IA +T G+ P LI V+ + F + Sbjct: 478 HGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L + ++ RV + I ++ I +G + ++ + P FF Sbjct: 3 EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ Y ++ L + L+ W I + P+D EV+ ++ + Sbjct: 63 PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +P +P I + A VSEV S G G+G I E T Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575 + + G+ I+ ++ L Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206 >gi|167909682|ref|ZP_02496773.1| putative transmembrane transporter [Burkholderia pseudomallei 112] Length = 310 Score = 277 bits (708), Expect = 5e-72, Method: Composition-based stats. Identities = 153/292 (52%), Positives = 202/292 (69%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 LLFRPM+ W++KFR ++T SW+L L + + + +G Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRA 310 Score = 96.1 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|227829305|ref|YP_002831084.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus L.S.2.15] gi|227455752|gb|ACP34439.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus L.S.2.15] Length = 535 Score = 276 bits (707), Expect = 5e-72, Method: Composition-based stats. Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + +S++ + +A KS+ + + +++I +S+P++ F +++F+ Sbjct: 11 SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ +YQ+ +P DL EVS ++RL K L Sbjct: 71 YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+S P + N++ S + F++ SE+ +G + + GIG+ I Q+ L Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + I ++ LL R T Y D+ + R +R+ S N Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P K + R E L L I ++ G+ + A+ +I Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294 Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + V++ I RV+ + I++ + I +G +I R + + P Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354 Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q A+FPA +FPL+ + + ++ LL T +Y+ ++ G Sbjct: 355 IQTYASFPAPAYFPLLFAATISFIHSVFGSWIDEFYVILLGFISTFYYVFYSYWLGIKNM 414 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533 PN + E+ +++ + W RY+I+P FPY ++G + AW + E S + Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + G+ IA +T G+ P LI V+ + F + Sbjct: 475 QVSHGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526 Score = 86.9 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L + ++ RV + I ++ I +G + ++ + P FF Sbjct: 3 EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ Y ++ L + L+ W I + P+D EV+ ++ + Sbjct: 63 PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +P +P I + A VSEV S G G+G I E T Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575 + + G+ I+ ++ L Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206 >gi|167844450|ref|ZP_02469958.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] Length = 321 Score = 276 bits (706), Expect = 8e-72, Method: Composition-based stats. Identities = 155/303 (51%), Positives = 205/303 (67%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLC 317 LLFRPM+ W++KFR ++T SW+L L + + + +G + L Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLGAALHRAARARASLG 318 Query: 318 RTL 320 L Sbjct: 319 VRL 321 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|27877096|dbj|BAC55866.1| hypothetical protein [Acidianus brierleyi] Length = 537 Score = 276 bits (705), Expect = 9e-72, Method: Composition-based stats. Identities = 110/540 (20%), Positives = 213/540 (39%), Gaps = 23/540 (4%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 D+ T R+ + S++ ++ +A K+R + + I ++++S+P++ F Sbjct: 2 FDLGLAILATLATLARVFITIGASIVTGWLLGYIAIKNRIFENIYISISEVLESVPVITF 61 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 +++F+ G +G ELA +F +FT+ VWN+ +YQ+ +P +L EVS +++L Sbjct: 62 FPVVLIFFV-FEIGGSLGVELAVLFLVFTAVVWNIWMGIYQAFKTVPENLLEVSENYKLG 120 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 K L +PFS+P + N++ S + F++ SE+ VG + GIG+ I+ Sbjct: 121 FLDKMIKLYIPFSIPRIAANLIPSFADALFYISVSEVFSVGVHTYQVFGIGTLISEYTAM 180 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNF 294 + LY +L +L + L R +S ++ L+ R+ F Sbjct: 181 GEYTNALY-LLLVLAIFTTSITFLLREFAAFSVQRYGLDTEVKENN--------MRRGRF 231 Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 + P + K + R + F F + Sbjct: 232 RVGYSARLSSAKGPFTKLAKYVTRPRPIDIDEEESKKKMPWGK---IGAGIGFLFLFLLA 288 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 + I +++ ++ + V + + RV ++ +I+ +I I G ++ Sbjct: 289 YSAFIVVKNVSASTWYYLFSTVPDDLIQIGMDYIRVAIIALISFVIAIFSGYFLAKDHKA 348 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNV 468 P Q +AAFPA +FPL+ ++ L T +YI ++ Sbjct: 349 ERIAIPIIQSIAAFPAPAYFPLLFGATYPYLSKILGGYTDEFYVLFLGFISTFYYIFYSY 408 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV-- 526 G P+++ EV + ++ W+ R +++P FPY + G + AW + E Sbjct: 409 WLGVKNMPSEYWEVMDNLNMGFWQRLRKVVIPSAFPYIIAGLSSTVNSAWGGLAIGEYWP 468 Query: 527 -ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + TGL +A + G V LI V+ + F L + Sbjct: 469 QIYNNYNLEVRTGLMKELALADANGQLALVGWLSLIFAVIVVMYSIFFTRKLLDLARKKY 528 >gi|330834718|ref|YP_004409446.1| binding-protein-dependent transport systems inner membrane component [Metallosphaera cuprina Ar-4] gi|329566857|gb|AEB94962.1| binding-protein-dependent transport systems inner membrane component [Metallosphaera cuprina Ar-4] Length = 536 Score = 276 bits (705), Expect = 1e-71, Method: Composition-based stats. Identities = 123/529 (23%), Positives = 220/529 (41%), Gaps = 25/529 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ +++S++ + A A K+R + V + ++++S+P++ F +++F Sbjct: 13 TISRVFLTLILSIVTGWFLAYFAIKNRIFEDIFVSVSEVLESVPVISFFPVVLIFFATDI 72 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G IG ELA IF +FT+ VWN+ +YQ+ P +L EV+ + RL K L +PF Sbjct: 73 GGS-IGIELAVIFLVFTAVVWNIWMGIYQAFKTAPENLREVAENLRLGFLGKLSKLYIPF 131 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+P + N++ S + F++ SE+ VG+T + GIGS IA LYA L Sbjct: 132 SVPRIAANLIPSFADAMFYITVSEVFSVGNTNYAVFGIGSLIANLTANAKYTEALYA-LA 190 Query: 248 MLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 +LGV R ++ ++ L+ R+ F N Sbjct: 191 VLGVFVALITFALREFSSFAVQRYGLDTEVSN--------MSVRRGRFRIRYSAKISNAV 242 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-QRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 +P++ K + R+ V + + SN +V L +F I +S Sbjct: 243 APVTKLAKYVIRSKPVSLDEEEDEKRRSWSNVGKVIAALFLFGISYSIFTVIETIPKSTW 302 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + T D ++L RV ++ I + +I I +G W+ I P Q Sbjct: 303 VSLVSSTPFD----LYLIVTDYARVALISITSLVIAIFLGYWLSLHHRIDRVAIPVIQTF 358 Query: 426 AAFPANVFFPLV------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 AAFPA +FPLV + ++ LL T +Y+ ++ G P+++ Sbjct: 359 AAFPAPAYFPLVYGATYTMLYKILGPFTNEFYVLLLGFISTFYYVFYSYWMGIKNMPSEY 418 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHIHLRT 536 EV ++ +++ W+ + ++ P FPY +TG + AW + E G Sbjct: 419 WEVMNNLNLSFWQKLKKVVFPSSFPYVITGLTSTVNSAWGGLAIGEYWPDIYDGRTLQVH 478 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 GL +A + +G+ + ++ V+ + L Sbjct: 479 EGLMKELALADSQGNLALIGWLSILFAIVVVIYSILFTRKLLDLSREKY 527 Score = 90.8 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 4/215 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ +T+ RV + +I++ + + + +++L + P FFP Sbjct: 3 LILAFLAVIVTISRVFLTLILSIVTGWFLAYFAIKNRIFEDIFVSVSEVLESVPVISFFP 62 Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 +V+ + + L + L+ W I + P + +EVA + + Sbjct: 63 VVLIFFATDIGGSIGIELAVIFLVFTAVVWNIWMGIYQAFKTAPENLREVAENLRLGFLG 122 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + +P P I + A VSEV S G+ + G+G+ IA T + Sbjct: 123 KLSKLYIPFSVPRIAANLIPSFADAMFYITVSEVFSVGNTNYAVFGIGSLIANLTANAKY 182 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 E + + ++ FV + F + + L Sbjct: 183 TEALYALAVLGVFVALIT-FALREFSSFAVQRYGL 216 Score = 84.6 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 103/258 (39%), Gaps = 9/258 (3%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 RR + N+ ++A + + GI + I+ + + D++ + +R L Sbjct: 267 KRRSWSNVGKVIAALFLFGISYSIFTVIETIPKSTWVSLVSSTPFDLYLIVTDYARVALI 326 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT--VVYFMNLYPG 129 ++++VI+ + R+ V +P++ + P + Y M Sbjct: 327 SITSLVIA----IFLGYWLSLHHRIDRVAIPVIQTFAAFPAPAYFPLVYGATYTMLYKIL 382 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E + F S + + +S + + N+P + EV + LS WQK + P S Sbjct: 383 GPFTNEFYVLLLGFISTFYYVFYSYWMGIKNMPSEYWEVMNNLNLSFWQKLKKVVFPSSF 442 Query: 190 PGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 P ++ + +++ W + E I G T+ G+ +ALA + +L I + + Sbjct: 443 PYVITGLTSTVNSAWGGLAIGEYWPDIYDGRTLQVHEGLMKELALADSQGNLALIGWLSI 502 Query: 247 TMLGVIFLYDQLLFRPMI 264 V+ +Y L R ++ Sbjct: 503 LFAIVVVIYSILFTRKLL 520 >gi|284996663|ref|YP_003418430.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus L.D.8.5] gi|284444558|gb|ADB86060.1| binding-protein-dependent transport systems inner membrane component [Sulfolobus islandicus L.D.8.5] Length = 535 Score = 276 bits (705), Expect = 1e-71, Method: Composition-based stats. Identities = 119/532 (22%), Positives = 223/532 (41%), Gaps = 27/532 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + +S++ + +A KS+ + + +++I +S+P++ F +++F+ Sbjct: 11 SLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFFPVVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G IG ELA F +FT+ VWN+ +YQ+ +P DL EVS ++RL K L Sbjct: 71 YR-IGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFLGKMAKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+S P + N++ S + F++ SE+ +G + + GIG+ I Q+ L Sbjct: 130 IPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQEYTLALDG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + I ++ LL R T Y D+ + R +R+ S N Sbjct: 190 LGILAIPIIIFTYLLRR---------FANYTVSKYGLDTEIKVTKRGRMRIRYATRMS-N 239 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 +P K + R E L L I ++ G+ + A+ +I Sbjct: 240 TIAPFVKLSKYVTRIGSRSASSEEETRRNLPW-----RYLGIGISVLLLGLLVYGAFSTI 294 Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + V++ I RV+ + I++ + I +G +I R + + P Sbjct: 295 SSVPKSVWLYLISTTPNVLFNLLIDYIRVLFIAIVSLVFSIFLGYFIATRERVEKVLIPA 354 Query: 422 AQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q A+FPA +FPL+ + + ++ LL T +Y+ ++ G Sbjct: 355 IQTYASFPAPAYFPLLFTATISFIHSVFGSWIEEFYVILLGFISTFYYVFYSYWLGIKNM 414 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV--ASWGHIH 533 PN + E+ +++ + W RY+I+P FPY ++G + AW + E S + Sbjct: 415 PNQYWEIMKNYNFSFWHKLRYVIIPSTFPYIISGLSSTINSAWGGLAIGEYWEISNSYTL 474 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + G+ IA +T G+ P LI V+ + F + Sbjct: 475 QVSHGIMKSIAVATANGNIPLAAWDSLIFGIVVMIYSIFFTRKMMDLAREKY 526 Score = 87.3 bits (215), Expect = 7e-15, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 3/204 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L + ++ RV + I ++ I +G + ++ + P FF Sbjct: 3 EILLIFLASLASLGRVFLTIGLSIITGWFLGYIAIKSKAFENIYISVVEIFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ Y ++ L + L+ W I + P+D EV+ ++ + Sbjct: 63 PVVLIFFVYRIGGYIGIELAVDFLVFTAVVWNIWIGIYQAFKTVPSDLLEVSENYRLGFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +P +P I + A VSEV S G G+G I E T Sbjct: 123 GKMAKLYIPYSWPRIAANLIPSFADAIFYITVSEVFSIGSSSYHVFGIGTLIGEFTASQE 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWH 575 + + G+ I+ ++ L Sbjct: 183 YTLALDGLGILAIPIIIFTYLLRR 206 >gi|167917694|ref|ZP_02504785.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 317 Score = 276 bits (705), Expect = 1e-71, Method: Composition-based stats. Identities = 153/286 (53%), Positives = 202/286 (70%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 LLFRPM+ W++KFR ++T SW+L L + + + +G Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQRLGAPLG 304 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|167718237|ref|ZP_02401473.1| putative transmembrane transporter [Burkholderia pseudomallei DM98] Length = 298 Score = 274 bits (702), Expect = 3e-71, Method: Composition-based stats. Identities = 152/280 (54%), Positives = 200/280 (71%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297 LLFRPM+ W++KFR ++T SW+L L + + + Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHRASLPQR 298 Score = 96.1 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVTFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|146304142|ref|YP_001191458.1| binding-protein-dependent transport systems inner membrane component [Metallosphaera sedula DSM 5348] gi|145702392|gb|ABP95534.1| binding-protein-dependent transport systems inner membrane component [Metallosphaera sedula DSM 5348] Length = 538 Score = 274 bits (701), Expect = 3e-71, Method: Composition-based stats. Identities = 116/528 (21%), Positives = 228/528 (43%), Gaps = 22/528 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ +++S++ ++ LA K+R V + + ++++S+P++ F +++F++ Sbjct: 14 TVGRVFITIILSIVTGWLLGYLALKNRAFENVYISLSEVLESVPVISFFPVVLIFFVSD- 72 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +G +LA IF +FT+ VWN+ +YQ+ +P +L EV+ + RL K L +PF Sbjct: 73 IGGFLGTQLAVIFLVFTAVVWNIWMGIYQAFKTVPENLNEVAENLRLGFLGKMSKLYIPF 132 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+P + N++ S + F++ SE+ VG++ + GIGS I+ LYA L Sbjct: 133 SIPRIAANLIPSFADAMFYITVSEVFSVGNSNYAVFGIGSLISRLTTLGLYNQALYA-LG 191 Query: 248 MLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 +L V+ ++ R +S ++ L+ + R+ F N Sbjct: 192 ILAVVVVFITFGLREFASFSVQRYGLDTESSNKA--------LRRGRFRIRYSAKVSNAI 243 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +P+S + + R+ + E ++ ++ ++ F + ++ +S+ Sbjct: 244 APVSKLARYVTRS-KTVPVDVDEEEEKVRQWGKIG-IVIAALFLLGISYSVFTVIRSVSP 301 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 F Y + L I RV V+ +++ +I I VG W+ + P Q +A Sbjct: 302 QTWSFLISSTPYDLVLIGIDYMRVGVISVVSLLIAIFVGYWLSVHERTERVVIPMIQTVA 361 Query: 427 AFPANVFFPLV------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 +FPA +FPL+ + ++ LL T +Y+ ++ G P ++ Sbjct: 362 SFPAPAYFPLLYGATYPILRPVLGGFTSEFYVLLLGFISTFYYVFYSYWMGIKNMPKEYW 421 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHIHLRTT 537 EV + ++T W+ R +++P PY V G + AW + E G Sbjct: 422 EVMDNLNLTFWQRLRRVVIPSAMPYIVAGLTSTVNSAWGGLAIGEYWPDIYDGRTLEVHQ 481 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 GL +A + +G V ++ V+ + F L + Sbjct: 482 GLMRELALADSQGKLALVGWLSILFAIVVVIYSLFFTRKLMDLARQKY 529 Score = 85.4 bits (210), Expect = 3e-14, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 75/197 (38%), Gaps = 3/197 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 L + +T+ RV + II++ + +G + +++L + P FFP Sbjct: 4 PLLALLAVGVTVGRVFITIILSIVTGWLLGYLALKNRAFENVYISLSEVLESVPVISFFP 63 Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 +V+ L L + L+ W I + P + EVA + + Sbjct: 64 VVLIFFVSDIGGFLGTQLAVIFLVFTAVVWNIWMGIYQAFKTVPENLNEVAENLRLGFLG 123 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + +P P I + A VSEV S G+ + G+G+ I+ T G + Sbjct: 124 KMSKLYIPFSIPRIAANLIPSFADAMFYITVSEVFSVGNSNYAVFGIGSLISRLTTLGLY 183 Query: 553 PEVVLGVLIMCCFVLAL 569 + + + I+ V+ + Sbjct: 184 NQALYALGILAVVVVFI 200 >gi|159041469|ref|YP_001540721.1| binding-protein-dependent transport systems inner membrane component [Caldivirga maquilingensis IC-167] gi|157920304|gb|ABW01731.1| binding-protein-dependent transport systems inner membrane component [Caldivirga maquilingensis IC-167] Length = 553 Score = 273 bits (699), Expect = 5e-71, Method: Composition-based stats. Identities = 107/538 (19%), Positives = 226/538 (42%), Gaps = 19/538 (3%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T R+ ++ S++ + AAK+ + V + + ++++P++ F +V+F+ Sbjct: 14 TLATFTRVAVTILASIVTGWFLGYAAAKNGLVERVFLSVTQTLEAVPVITFFPIVLVFFI 73 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + G +G ELA F +FT+ VWN+ Y+S+ + + LE+V+ ++LS KF L Sbjct: 74 SSIRG-YLGVELAVDFLVFTAVVWNIWVGEYESIKTVSQSLEDVANMYKLSFIAKFSKLY 132 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + N+++S + G F++ SE+I +G + GIGS I + + A Sbjct: 133 IPVTIPRVAGNVLVSFADGLFYITVSEVIALGTKSYHVFGIGSLIFSWVNVGMWFNAIIA 192 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG-------IYPADSWVLYLFRKTNFLRF 297 ++ ++ ++ + + RP + W+ K+ + L R +LR Sbjct: 193 LIVLVIMVTIVVFGVLRPFVNWAVKYSYDPYAEVMRTGVRRQTPSRIRASLARNVRYLRR 252 Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 I + +R P L + + ++ Sbjct: 253 ITAAERALIPAFVRATSYAVYHRLTVR---PRPINVLTRFDKYVAAGIGSLLLALIAYSV 309 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 +W + + Y + ++ + R++++ + A +I IP+ + RP + + Sbjct: 310 YSSWSTTWLPIMINIYDNWEVYLYYLGLDWLRILLVTVSAILIAIPINYLMVTRPKLEAV 369 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYY-------HLNPNLWLSLLMIFGTQWYILFNVIA 470 + P + LA+ P + + PLV Y ++ + + ++ T WY+++N+ Sbjct: 370 LLPILEDLASIPVSAYLPLVAIPFVTYLAIRLGLRISLEILVFIVAFLSTAWYVIYNMYV 429 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW- 529 G P +VA++ +++ W + +PG P +TG + G W ++E Sbjct: 430 GMKTIPRSLWDVANNLNLSSWYKLTKLAIPGAMPATITGLASTVGSTWGGLEIAEYFQGI 489 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G A + T G+ + LI+ V+ L+ FLW L+ + R+ Sbjct: 490 NGKVYMVHGYTALMDYYTATGNLIGLEAMSLILAINVILLSVFLWRSLFTMARQRYRM 547 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 5/252 (1%) Query: 31 IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90 ++ ++ + + + + ++ I + Y LR+L V ++L L Sbjct: 301 LLALIAYSVYSSWSTTWLPIMINIYDNWEVYLYYLGLDWLRILLVTVSAILIAIPINYLM 360 Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYPGKVIGAELAAIFAIFTSQV 147 +L VL+PIL+ + SIP+ +L + F + + G I E+ F S Sbjct: 361 VTRPKLEAVLLPILEDLASIPVSAYLPLVAIPFVTYLAIRLGLRISLEILVFIVAFLSTA 420 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + ++MY + IPR L +V+ + LS W K L +P +MP + + ++ W + Sbjct: 421 WYVIYNMYVGMKTIPRSLWDVANNLNLSSWYKLTKLAIPGAMPATITGLASTVGSTWGGL 480 Query: 208 VASEMI-VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 +E + V + G + + +L+ + L + + L L+R + Sbjct: 481 EIAEYFQGINGKVYMVHGYTALMDYYTATGNLIGLEAMSLILAINVILLSVFLWRSLFTM 540 Query: 267 S-NKFRLERTTG 277 + ++R+E Sbjct: 541 ARQRYRMEGAIS 552 Score = 80.0 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 3/213 (1%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T V+ + T RV V I+ + + +G + Q L A P Sbjct: 3 TLSIVITSLLATLATFTRVAVTILASIVTGWFLGYAAAKNGLVERVFLSVTQTLEAVPVI 62 Query: 432 VFFPLVVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 FFP+V+ +L L + L+ W I ++VA+ + + Sbjct: 63 TFFPIVLVFFISSIRGYLGVELAVDFLVFTAVVWNIWVGEYESIKTVSQSLEDVANMYKL 122 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + + + +P P + + VSEV + G G+G+ I Sbjct: 123 SFIAKFSKLYIPVTIPRVAGNVLVSFADGLFYITVSEVIALGTKSYHVFGIGSLIFSWVN 182 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 G + ++ ++++ V + + P + Sbjct: 183 VGMWFNAIIALIVLVIMVTIVVFGVLRPFVNWA 215 >gi|297567837|ref|YP_003686808.1| hypothetical protein Mesil_3497 [Meiothermus silvanus DSM 9946] gi|296852286|gb|ADH65300.1| hypothetical protein Mesil_3497 [Meiothermus silvanus DSM 9946] Length = 671 Score = 271 bits (694), Expect = 2e-70, Method: Composition-based stats. Identities = 146/333 (43%), Positives = 204/333 (61%), Gaps = 3/333 (0%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-VPITLDVHSLPQYAS 66 P + R + +DL+ V+ ++ + +Q T P + ++LD LP Y Sbjct: 8 PEALRPRAPFSRWDLVVIPGVLVLLALFTLALQGATEPFGPTSPNLTVSLDPAHLPYYGL 67 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT LRML+A+++SL+FTFVYAT+AAK R VL+PILD +QS+PILGFLT T F+ L Sbjct: 68 RTLLRMLAALLLSLVFTFVYATVAAKVPRTERVLIPILDFLQSLPILGFLTATTSIFLGL 127 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + G + G E A+IFAIFTSQVWNMTFS Y SL +P++L+E + RLS WQ+FW L VP Sbjct: 128 FRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPKELQEAAAMLRLSPWQRFWKLEVP 187 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMI--VVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 F++P LVWN MMS+SGGWFFVVASE I V D LPG+GSYIALAI++ + A+LYA Sbjct: 188 FALPHLVWNAMMSVSGGWFFVVASEAINVVGRDQTQYLPGVGSYIALAIQQANTHAMLYA 247 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 +T+ ++ LYDQL FRP++ W+ KF+ E++ A SWVL L ++ + I Sbjct: 248 GVTLFLLVLLYDQLFFRPIVAWAEKFKFEQSESSDTAQSWVLTLLKRARLSQRIARLPQP 307 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN 337 + L + R + + ++ Sbjct: 308 LWEWLWLKSARRNRPGEALEPPPQQRGRARLAD 340 Score = 226 bits (577), Expect = 7e-57, Method: Composition-based stats. Identities = 106/217 (48%), Positives = 141/217 (64%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 ++ +V V+ G T RV +++ +++W+PVG++IG RP ++ QP AQ AAFPA Sbjct: 454 VSWPEVPEVLKYGLFTALRVSFFVLLVTLVWLPVGVYIGLRPRLTQWAQPLAQFGAAFPA 513 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FPL V ++++ LNP +W+S LM+ G QWYILFNVIAG A PND KE A + + G Sbjct: 514 NLLFPLFVVTIAHFRLNPEIWVSPLMVLGGQWYILFNVIAGTVAIPNDLKEAARMYRLRG 573 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W WR ++LP IFP +VTG ITA GG+WNASIV+EV WG+ L TGLGAYIA + Sbjct: 574 WGLWRRLLLPAIFPAFVTGGITATGGSWNASIVAEVVRWGNTTLVATGLGAYIARWSTGE 633 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P V LG+L+M VLA NR +W LY RL Sbjct: 634 FNPHVGLGMLVMGLLVLAYNRLIWRRLYQLAEERYRL 670 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 5/213 (2%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 +Y T LR+ +++ L RL P+ + P Sbjct: 463 LKYGLFTALRVSFFVLLVTLVWLPVGVYIGLRPRLTQWAQPLAQFGAAFPANLLFPL--- 519 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F+ + E+ + W + F++ IP DL+E +R +RL GW + Sbjct: 520 -FVVTIAHFRLNPEIWVSPLMVLGGQWYILFNVIAGTVAIPNDLKEAARMYRLRGWGLWR 578 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 L +P P V + + G W + +E++ G+T + G+G+YIA + + Sbjct: 579 RLLLPAIFPAFVTGGITATGGSWNASIVAEVVRWGNTTLVATGLGAYIARWSTGEFNPHV 638 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWS-NKFRLE 273 ML M ++ Y++L++R + + ++RL+ Sbjct: 639 GLGMLVMGLLVLAYNRLIWRRLYQLAEERYRLD 671 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 93/272 (34%), Gaps = 11/272 (4%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVL 377 +R FP + L + +V +A Q + D Sbjct: 1 MRRVFPSPEALRPRAPFSRWDLVVIPGVLVLLALFTLALQGATEPFGPTSPNLTVSLDPA 60 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF--- 434 ++ + G T+ R++ ++++ + P + P L + P F Sbjct: 61 HLPYYGLRTLLRMLAALLLSLVFTFVYATVAAKVPRTERVLIPILDFLQSLPILGFLTAT 120 Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 + + + W + F+ A P + +E A+ ++ W+ Sbjct: 121 TSIFLGLFRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPKELQEAAAMLRLSPWQR 180 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS--WGHIHLRTTGLGAYIAESTEKGS 551 + + +P P+ V A+ + G W + SE + G+G+YIA + ++ + Sbjct: 181 FWKLEVPFALPHLVWNAMMSVSGGWFFVVASEAINVVGRDQTQYLPGVGSYIALAIQQAN 240 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++ + + VL ++ + P+ + + Sbjct: 241 THAMLYAGVTLFLLVLLYDQLFFRPIVAWAEK 272 >gi|167737269|ref|ZP_02410043.1| ABC transporter, permease protein [Burkholderia pseudomallei 14] Length = 292 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 152/274 (55%), Positives = 198/274 (72%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 D +A +LV+ +I + G+++ +P D+ I+L +LP YA RT LRML+A+ Sbjct: 19 GWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVLRMLAALG 78 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 S +FTF YATLAAKSR VL+P+LD++QS+PILG+L+FTV +F+++ PG +GAELA Sbjct: 79 ASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGTALGAELA 138 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AIFAIFTSQ WNM FS YQSL +P DL+E SRS R +GWQ+FW L VPF+MPGLVWN M Sbjct: 139 AIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMPGLVWNAM 198 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +SMSGGWFFVVASE I VG I LPGIG+Y+A AI E+DL A+ +A+ M I LYDQ Sbjct: 199 LSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTIAIALYDQ 258 Query: 258 LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 LLFRPM+ W++KFR ++T SW+L L + Sbjct: 259 LLFRPMVAWAHKFRCDQTVSGPAPRSWLLDLLHR 292 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 4/259 (1%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L+ + L + ++ G + + L + T+ Sbjct: 12 RRHLRTLGWRDAIAALLVLALIMLFGSGVRQMALPLDVARPEAISLSPLALPGYALRTVL 71 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY----Y 444 R++ + + + + + P +L + P + V+ Sbjct: 72 RMLAALGASFVFTFAYATLAAKSRAAQAVLIPLLDVLQSVPILGYLSFTVAFFLSIAPGT 131 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L L + W + F+ P+D E + S TGW+ + + +P P Sbjct: 132 ALGAELAAIFAIFTSQAWNMAFSFYQSLRTVPHDLDEASRSLRHTGWQRFWRLEVPFAMP 191 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V A+ + G W + SE S G + + G+GAY+A + + V + M Sbjct: 192 GLVWNAMLSMSGGWFFVVASEAISVGGLRIALPGIGAYVARAIAERDLAAVGWAIAAMTI 251 Query: 565 FVLALNRFLWHPLYLYGTR 583 + ++ L+ P+ + + Sbjct: 252 AIALYDQLLFRPMVAWAHK 270 >gi|167010888|ref|ZP_02275819.1| ABC transporter permease protein [Francisella tularensis subsp. holarctica FSC200] gi|254366877|ref|ZP_04982915.1| ABC transporter, permease protein [Francisella tularensis subsp. holarctica 257] gi|134252705|gb|EBA51799.1| ABC transporter, permease protein [Francisella tularensis subsp. holarctica 257] Length = 396 Score = 266 bits (680), Expect = 8e-69, Method: Composition-based stats. Identities = 117/371 (31%), Positives = 197/371 (53%), Gaps = 14/371 (3%) Query: 22 LLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 ++ L++ + + + + D + I+LD LP Y RTT+R++ M+ SL Sbjct: 1 MIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTMRLIIGMIFSL 60 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+P ++G E AAIF Sbjct: 61 IFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHSIMGLEAAAIF 120 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IFTSQ WN+ +YQ++ +P +L E +F+L+ WQ+FW + +P+S+PGL+WN+M+S Sbjct: 121 GIFTSQAWNIALILYQTIRIVPAELTEAVTAFKLNAWQRFWKIELPYSVPGLLWNIMVSQ 180 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAMLTMLGVIFLYDQLL 259 S WF + ASE I + LPGIGSYIAL + + +++AI YA++ ++ I L+DQLL Sbjct: 181 SAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALVAIIINIVLFDQLL 240 Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319 FRP++ WS KF+ E + W+ ++K+ + I L N L + Sbjct: 241 FRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIVFWLINGASFLNKK 300 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 I P +++ + W+ V+ + + F D+ Y+ Sbjct: 301 ---INLKSPTRDIKILKKLSCT-----AWYIVIISACVWAGNALWHF----FPDGDMSYL 348 Query: 380 IWLGCITMFRV 390 I L T+ + Sbjct: 349 IPLMIETIRHM 359 Score = 103 bits (258), Expect = 7e-20, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 83/250 (33%), Gaps = 10/250 (4%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-----QDVLYVIWLGCITMFRVVVLIIIAS 398 + I ++ AW + + D ++ + T R+++ +I + Sbjct: 1 MIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTMRLIIGMIFSL 60 Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSL 454 I + VG H + P L + P F + + + Sbjct: 61 IFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHSIMGLEAAAIF 120 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + W I + P + E ++F + W+ + I LP P + + + Sbjct: 121 GIFTSQAWNIALILYQTIRIVPAELTEAVTAFKLNAWQRFWKIELPYSVPGLLWNIMVSQ 180 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVLALNRFL 573 AW A SE + G+G+YIA + + ++ + ++ ++ L Sbjct: 181 SAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALVAIIINIVLFDQLL 240 Query: 574 WHPLYLYGTR 583 + PL + + Sbjct: 241 FRPLVKWSEK 250 >gi|16082188|ref|NP_394633.1| hypothetical protein Ta1177 [Thermoplasma acidophilum DSM 1728] gi|10640488|emb|CAC12302.1| hypothetical membrane protein [Thermoplasma acidophilum] Length = 541 Score = 265 bits (678), Expect = 1e-68, Method: Composition-based stats. Identities = 112/534 (20%), Positives = 226/534 (42%), Gaps = 25/534 (4%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T R+L ++IS++ + A A K + + + I+++ +S+P++ F ++ F+ Sbjct: 11 ALATAGRVLGLILISIVTGWFLAYAAIKGKIFENIYISIIEVFESVPVISFFPIVLIIFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G +G E+AA F +FT+ VWN+ YQ+ +PR++ EV+ ++++S K + Sbjct: 71 TRIGGP-LGVEMAADFLVFTAVVWNIWMGEYQAFKTVPREMLEVAENYQMSFLTKMRRIF 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +PFS P + N+ S+S G+F++ SE+ VG GIG+ + ++ + ++Y Sbjct: 130 IPFSYPRIAANLFPSVSDGFFYITVSEVFSVGIHTYQTFGIGT-VLDSLAASGQIRLIYV 188 Query: 245 MLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 L +L + + + R ++ +K+ ++ I L + + T L + + Sbjct: 189 ALGILAAVIIVIIIGLREFSRYAVSKYTVDTDAPIIRRGR--LNVKQTTRLLSVVARN-- 244 Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363 PLS E + +++S + + ++ G+ + A Sbjct: 245 ----PLSRLAGYYRSRTLSRPPEVFEKHEK--RKEKISRYISVAIGVIILGLILYSAVTL 298 Query: 364 IGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 I + + + ++ RV V++ I+ +I I +G ++ P Sbjct: 299 IVSVPHSEWGRLFNLTPKIMLYLLYDYLRVGVILAISFVISIFLGYYLAMHSRAEGIGVP 358 Query: 421 FAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 Q L+A+P ++FP + + + +++ L T +YI ++ G A Sbjct: 359 IIQTLSAYPPPIYFPFIFAASFAFIHGVFGPFTDEVYVLSLGFVSTFYYIFYSFWMGVKA 418 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGH 531 P ++ EV + ++ + R IILPG FPY ++G + AW ++ E GH Sbjct: 419 LPAEYFEVMKNLNMGYFSRMRSIILPGTFPYLISGISSTINSAWGGLMIGEYWPDIVSGH 478 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 GL +I T G+ G I V + + + Sbjct: 479 SLEVHFGLMKFIDVETNAGNIALAGWGSFIFGIVVAVYSILFTRRMMDLARKRY 532 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 97/256 (37%), Gaps = 10/256 (3%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 + V+++G+I + + + + L + Y LR+ + IS Sbjct: 279 ISVAIGVIILGLILYSAVTLIVSVPHSEWGRL--FNLTPKIML-YLLYDYLRVGVILAIS 335 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 + + A R + VPI+ + + P + F + V G + Sbjct: 336 FVISIFLGYYLAMHSRAEGIGVPIIQTLSAYPPPIYFPFIFAA-SFAFIHGVFGPFTDEV 394 Query: 140 FAI---FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + + F S + + +S + + +P + EV ++ + + + + +P + P L+ + Sbjct: 395 YVLSLGFVSTFYYIFYSFWMGVKALPAEYFEVMKNLNMGYFSRMRSIILPGTFPYLISGI 454 Query: 197 MMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 +++ W ++ E IV G ++ G+ +I + ++ + V+ Sbjct: 455 SSTINSAWGGLMIGEYWPDIVSGHSLEVHFGLMKFIDVETNAGNIALAGWGSFIFGIVVA 514 Query: 254 LYDQLLFRPMIVWSNK 269 +Y L R M+ + K Sbjct: 515 VYSILFTRRMMDLARK 530 Score = 79.6 bits (195), Expect = 2e-12, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 3/188 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++L + T RV+ LI+I+ + + + ++ + P FF Sbjct: 3 EILLITLAALATAGRVLGLILISIVTGWFLAYAAIKGKIFENIYISIIEVFESVPVISFF 62 Query: 435 PLVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V+ L + L+ W I P + EVA ++ ++ Sbjct: 63 PIVLIIFVTRIGGPLGVEMAADFLVFTAVVWNIWMGEYQAFKTVPREMLEVAENYQMSFL 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 R I +P +P + + VSEV S G +T G+G + G Sbjct: 123 TKMRRIFIPFSYPRIAANLFPSVSDGFFYITVSEVFSVGIHTYQTFGIGTVLDSLAASGQ 182 Query: 552 FPEVVLGV 559 + + + Sbjct: 183 IRLIYVAL 190 >gi|15920813|ref|NP_376482.1| hypothetical protein ST0594 [Sulfolobus tokodaii str. 7] gi|15621597|dbj|BAB65591.1| 544aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 544 Score = 263 bits (672), Expect = 6e-68, Method: Composition-based stats. Identities = 106/531 (19%), Positives = 212/531 (39%), Gaps = 21/531 (3%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + T R+ ++ S+ + A + K++ + V ++++ +S+P+ F +++F+ Sbjct: 16 SLVTIGRVWVTILFSIFSGWFLAYASIKNKIFENIYVSLIEVFESVPVFSFFPIVLIFFI 75 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G +G E A +F +FT+ WN+ YQ+ +P DL EVS ++RL W L Sbjct: 76 YDIGGS-LGVEFAVLFLVFTAVTWNIWMGEYQAFKTVPEDLLEVSENYRLKFWGTMTKLY 134 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +PFS+P + N++ S + F++ SE+ VG + GIG+ IA + E + LY Sbjct: 135 IPFSIPRIAANLIPSFADALFYITVSEVFAVGTHTYQVFGIGTVIANLVSEGEYTDALYG 194 Query: 245 MLTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 + +L + + LL R +S ++ L+ I ++ T + + Y + Sbjct: 195 I-AVLAIFTIAITLLLREFSKYSVERYGLDTEISIRKRGR--IHFGYSTRLVSALSYPAK 251 Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363 + + +L + + S +L F I + + Sbjct: 252 --LAKVFPTPIRLRSNIKEEDEEKEHKYFWKISGIVAGVLLLAFILYGAISTIISVPLST 309 Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 GY+++ + + RV ++ +++ + I VG ++ + P Q Sbjct: 310 WGYLISTLPSDLISILF-----DYIRVGIIALLSFVFAIFVGYYLTTHEKTEKIVIPIIQ 364 Query: 424 LLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 +A PA ++PL + + ++ L T +Y+ ++ G P Sbjct: 365 AYSAIPAPAYYPLFLLVTLPFIHSIFGPFTNEFYVLFLGFISTFYYVFYSFWIGVKNLPQ 424 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHIHL 534 + E+ ++ W+ RY+I+PG FPY + G + AW + E + Sbjct: 425 QYWEIMKNYDFKFWQKLRYVIIPGTFPYIIAGLSSTINSAWGGLAIGEYWPDIIQNYNLE 484 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 TG+ I +T +G+ LI V + L + Sbjct: 485 VHTGMMKLIDVATNEGNIVLASWVSLIFGIIVAVYSILFTRKLMDLARKKY 535 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 4/215 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ I +T+ RV V I+ + + + ++ + P FFP Sbjct: 9 LITFILASLVTIGRVWVTILFSIFSGWFLAYASIKNKIFENIYVSLIEVFESVPVFSFFP 68 Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 +V+ Y L + L+ W I P D EV+ ++ + W Sbjct: 69 IVLIFFIYDIGGSLGVEFAVLFLVFTAVTWNIWMGEYQAFKTVPEDLLEVSENYRLKFWG 128 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + +P P I + A VSEV + G + G+G IA +G + Sbjct: 129 TMTKLYIPFSIPRIAANLIPSFADALFYITVSEVFAVGTHTYQVFGIGTVIANLVSEGEY 188 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 + + G+ ++ F +A+ L Y L Sbjct: 189 TDALYGIAVLAIFTIAIT-LLLREFSKYSVERYGL 222 >gi|302348739|ref|YP_003816377.1| ABC transporter, putative [Acidilobus saccharovorans 345-15] gi|302329151|gb|ADL19346.1| ABC transporter, putative [Acidilobus saccharovorans 345-15] Length = 542 Score = 262 bits (671), Expect = 1e-67, Method: Composition-based stats. Identities = 124/533 (23%), Positives = 231/533 (43%), Gaps = 27/533 (5%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 TT R+ + +S++ ++ LA KSR V V + ++++S+P++ F +++F++ Sbjct: 15 LATTGRVFLTIGLSIVTGWLLGYLAIKSRAFESVYVGLSEVLESVPVISFFPVVLIFFVD 74 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G IG ELA F +FT+ VWN+ +YQ+ +P + EV+ + R K L + Sbjct: 75 R-IGGYIGVELAVDFLVFTAVVWNIWMGIYQAFKTLPLPMLEVAENLRYGFIAKMRRLYI 133 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 PFSMP + N++ S + +F++ SE+ +G T + GIGS IA + E L + Y++ Sbjct: 134 PFSMPRIAANLIPSFADAYFYITVSEVFSIGATSYHVFGIGSLIAKFMNEGMLNYVYYSL 193 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 L + +I L R W+ + P + R + RF Y++ Sbjct: 194 LGLAMLIAGVIFAL-RNFANWAVA---KYGLDTPPRSAHPGVRTRWRSLSRF--YAAARP 247 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 ++ + R + + R + S +++ + L I ++ + G A ++ Sbjct: 248 LRVITTVTSRPVRAVPLRRVERIQ-----LSERQLDWALRIVGAVLLLLIIYGAAKAALS 302 Query: 366 YIVNHFTYQDVLYVIWLGCITM----FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 V T+ +L W + + RV V+ +I+ I + VG ++ F + P Sbjct: 303 --VKPSTWNYLLSNTWPIIVGLAYDYARVAVITLISFAIAVFVGYYLAFHRRAEAVFIPL 360 Query: 422 AQLLAAFPANVFFPL------VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q L+A PA +FPL + ++ L++ L T +YI + G A Sbjct: 361 IQSLSALPAPAYFPLLFLATSAILYRAFGGFTNELYVLFLGFVSTFYYIFYAYWMGIKAV 420 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHI 532 P++ E+ + ++ ++ R I++PG PY VTG + AW ++ E Sbjct: 421 PHEVVELMDNLNMGFFKRLRKILIPGTLPYIVTGLTSTIDSAWGGLMIGEYWPDIIGDKT 480 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + G+ + +T +G+ LI V+A L R Sbjct: 481 LEVSHGILKILDVATNEGNIALAAYASLIFGIVVVAFALLFTRHLLEISRRKY 533 Score = 95.4 bits (236), Expect = 3e-17, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 99/255 (38%), Gaps = 5/255 (1%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 D ++ ++ ++++G + + + + + + R+ +IS Sbjct: 277 LDWALRIVGAVLLLLIIYGAAKAALSVKPSTWNYLLSNTWPIIVGLAYDYARVAVITLIS 336 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA--ELA 137 A RR V +P++ + ++P + + + G EL Sbjct: 337 FAIAVFVGYYLAFHRRAEAVFIPLIQSLSALPAPAYFPLLFLATSAILYRAFGGFTNELY 396 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +F F S + + ++ + + +P ++ E+ + + +++ + +P ++P +V + Sbjct: 397 VLFLGFVSTFYYIFYAYWMGIKAVPHEVVELMDNLNMGFFKRLRKILIPGTLPYIVTGLT 456 Query: 198 MSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 ++ W ++ E I+ T+ GI + +A E ++ YA L V+ Sbjct: 457 STIDSAWGGLMIGEYWPDIIGDKTLEVSHGILKILDVATNEGNIALAAYASLIFGIVVVA 516 Query: 255 YDQLLFRPMIVWSNK 269 + L R ++ S + Sbjct: 517 FALLFTRHLLEISRR 531 Score = 71.9 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 70/204 (34%), Gaps = 8/204 (3%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + T RV + I ++ + +G S +++L + P FFP+V+ Sbjct: 10 IALAILATTGRVFLTIGLSIVTGWLLGYLAIKSRAFESVYVGLSEVLESVPVISFFPVVL 69 Query: 439 SCVS---YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 ++ L + L+ W I + P EVA + R Sbjct: 70 IFFVDRIGGYIGVELAVDFLVFTAVVWNIWMGIYQAFKTLPLPMLEVAENLRYGFIAKMR 129 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG----- 550 + +P P I + A+ VSEV S G G+G+ IA+ +G Sbjct: 130 RLYIPFSMPRIAANLIPSFADAYFYITVSEVFSIGATSYHVFGIGSLIAKFMNEGMLNYV 189 Query: 551 SFPEVVLGVLIMCCFVLALNRFLW 574 + + L +LI N W Sbjct: 190 YYSLLGLAMLIAGVIFALRNFANW 213 >gi|224456411|ref|ZP_03664884.1| ABC transporter permease family protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 330 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 112/314 (35%), Positives = 182/314 (57%), Gaps = 2/314 (0%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 +R PN D++ L++ + + + + D + I+LD LP Y R Sbjct: 6 TITKKRFLPNKADVIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLR 65 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT+R++ M+ SL+F + AK++ V +PI++ ++S P+LGFLTFT +F+ L+ Sbjct: 66 TTMRLIIGMIFSLIFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLF 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P ++G E AAIF IFTSQ WN+ +YQ++ +P +L E + +F+L+ WQ+FW + +P+ Sbjct: 126 PHSIMGLEAAAIFGIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPY 185 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI-LYAML 246 S+PGL+WN+M+S S WF + ASE I + LPGIGSYIAL + + +++AI YA++ Sbjct: 186 SVPGLLWNIMVSQSAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALV 245 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 ++ I L+DQLLFRP++ WS KF+ E + W+ ++K+ + I Sbjct: 246 AIIINIVLFDQLLFRPLVKWSEKFKYESINNKTTDNPWLYRSYKKSQLVNAIKPIFSTIV 305 Query: 307 SPLSNNVKKLCRTL 320 L N L + L Sbjct: 306 FWLINGASFLNKKL 319 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 10/250 (4%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTY-----QDVLYVIWLGCITMFRVVVLIIIAS 398 + I ++ AW + + D ++ + T R+++ +I + Sbjct: 19 VIIVALILIVSTLAYYAWSDMHQAFIDASSVSAISLDPSHLPYYMLRTTMRLIIGMIFSL 78 Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSL 454 I + VG H + P L + P F + + + Sbjct: 79 IFALIVGYACAKNKHFARVCLPIINFLESAPLLGFLTFTTAFFIFLFPHSIMGLEAAAIF 138 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + W I + P + E A++F + W+ + I LP P + + + Sbjct: 139 GIFTSQAWNIALILYQTIRIVPAELTEAATAFKLNAWQRFWKIELPYSVPGLLWNIMVSQ 198 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL-GVLIMCCFVLALNRFL 573 AW A SE + G+G+YIA + + ++ + ++ ++ L Sbjct: 199 SAAWFAITASEAIPTITGDVSLPGIGSYIALGLTDSNIIAIFFYALVAIIINIVLFDQLL 258 Query: 574 WHPLYLYGTR 583 + PL + + Sbjct: 259 FRPLVKWSEK 268 >gi|148658632|ref|YP_001278837.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] gi|148570742|gb|ABQ92887.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus sp. RS-1] Length = 670 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 152/365 (41%), Positives = 215/365 (58%), Gaps = 12/365 (3%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-VPITLDVHSLPQYASR 67 + R +DL+ LVI I +L Q + P D + ++L+ +LP Y R Sbjct: 9 GVLRPRFKLTPWDLVVVPLVIVAILLLTVAFQGASQPFDETTPDLTVSLNPANLPYYGLR 68 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T RM A+++SLLFTF ATLAAKSRR +V++P LD +QS+PILGFLT T F+ ++ Sbjct: 69 TVFRMFLAVLLSLLFTFTVATLAAKSRRAEIVIIPALDFLQSLPILGFLTVTTAIFLGMF 128 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G ++G E A+IFAIFTSQVWNM FS Y SL PR+L+E + RLS W+KFW L VPF Sbjct: 129 RGSLLGLEAASIFAIFTSQVWNMAFSFYHSLITTPRELQEAAAVLRLSPWKKFWKLEVPF 188 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 +MPGL+WN MMS+SGGWFFVVASE+I V D LPG+GSY+ LAI++ D+ A++YA Sbjct: 189 AMPGLIWNTMMSVSGGWFFVVASEVISVVGRDNDQYLPGVGSYVGLAIEQADVAAMVYAG 248 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 LT+L +I +YDQL+FRP++ WS KF+ E++ A SW+L L +++ +G Sbjct: 249 LTLLIIILIYDQLIFRPIVAWSEKFKFEQSEAQEVAQSWMLRLLQRSGIASSLGALGAAI 308 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 + + + H S + + +D W+ +V A+ W Sbjct: 309 RQSI---------PVRLTGDHPGPRVEPQPSLRPIDRAIDRIWYALVIAAALWAVWFLAT 359 Query: 366 YIVNH 370 Y+ Sbjct: 360 YMFGP 364 Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats. Identities = 111/217 (51%), Positives = 141/217 (64%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 ++ +VL +WLG +T RVV+ I I++++W P+G+WIG RP ++ +QP AQ AAFPA Sbjct: 453 VSWSEVLECLWLGLLTTMRVVIWIGISTLVWTPIGVWIGLRPRVAQFVQPLAQFAAAFPA 512 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FP+ V ++ Y L NL+ + LMI G QWYILFNVIAG + PND KE A + G Sbjct: 513 NLLFPIAVVLIATYALPQNLFQAPLMILGAQWYILFNVIAGTISIPNDLKEAARVLGLRG 572 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W WWR +I+P IFP +VTG ITA GG+WNASIVSEV SWG L TGLGAYIA + Sbjct: 573 WAWWRKLIIPAIFPAFVTGGITASGGSWNASIVSEVVSWGATTLTLTGLGAYIAYWSTGE 632 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P V LG+L+M VL NR W LY RL Sbjct: 633 FNPHVGLGMLVMGLLVLGFNRLFWRRLYALAETRFRL 669 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 5/209 (2%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 TT+R++ + IS L R+ + P+ + P VV Sbjct: 466 LLTTMRVVIWIGISTLVWTPIGVWIGLRPRVAQFVQPLAQFAAAFPANLLFPIAVV---- 521 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L + L + W + F++ +IP DL+E +R L GW + L + Sbjct: 522 LIATYALPQNLFQAPLMILGAQWYILFNVIAGTISIPNDLKEAARVLGLRGWAWWRKLII 581 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P P V + + G W + SE++ G T + L G+G+YIA + + M Sbjct: 582 PAIFPAFVTGGITASGGSWNASIVSEVVSWGATTLTLTGLGAYIAYWSTGEFNPHVGLGM 641 Query: 246 LTMLGVIFLYDQLLFRPMIVWSN-KFRLE 273 L M ++ +++L +R + + +FRL+ Sbjct: 642 LVMGLLVLGFNRLFWRRLYALAETRFRLD 670 Score = 85.7 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 98/272 (36%), Gaps = 11/272 (4%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVL 377 +R FP+ + + + L + +V + + +A+Q + T + Sbjct: 1 MRVTFPDAGVLRPRFKLTPWDLVVVPLVIVAILLLTVAFQGASQPFDETTPDLTVSLNPA 60 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF--- 434 + + G T+FR+ + ++++ + V I P L + P F Sbjct: 61 NLPYYGLRTVFRMFLAVLLSLLFTFTVATLAAKSRRAEIVIIPALDFLQSLPILGFLTVT 120 Query: 435 -PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 + + L + W + F+ P + +E A+ ++ W+ Sbjct: 121 TAIFLGMFRGSLLGLEAASIFAIFTSQVWNMAFSFYHSLITTPRELQEAAAVLRLSPWKK 180 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS--WGHIHLRTTGLGAYIAESTEKGS 551 + + +P P + + + G W + SEV S G+G+Y+ + E+ Sbjct: 181 FWKLEVPFAMPGLIWNTMMSVSGGWFFVVASEVISVVGRDNDQYLPGVGSYVGLAIEQAD 240 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 +V L + +L ++ ++ P+ + + Sbjct: 241 VAAMVYAGLTLLIIILIYDQLIFRPIVAWSEK 272 >gi|156740134|ref|YP_001430263.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] gi|156231462|gb|ABU56245.1| binding-protein-dependent transport systems inner membrane component [Roseiflexus castenholzii DSM 13941] Length = 671 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 153/366 (41%), Positives = 216/366 (59%), Gaps = 13/366 (3%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI--VPITLDVHSLPQYAS 66 + R+ ++D++ L+I II +L Q + P D+ + ++LD +LP Y Sbjct: 9 GVLRPRLKLTLWDVVVIPLIIVIILLLTIAFQGASQPFDVAATPDLTVSLDPINLPYYGL 68 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT RM A+++SLLFTF ATLAAKSRR V++P LD +QS+PILGFLT T F+ + Sbjct: 69 RTVFRMFLAVLLSLLFTFTVATLAAKSRRAETVIIPALDFLQSLPILGFLTVTTAIFIGM 128 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + G ++G E A+IFAIFTSQVWNM FS Y SL PR+L E + RLS W+KFW L VP Sbjct: 129 FRGSLLGLEAASIFAIFTSQVWNMAFSFYHSLITTPRELREAAAVLRLSPWKKFWNLDVP 188 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIALAIKEQDLLAILYA 244 F+MPGL+WN MMS+SGGWFFVVASE+I V D LPGIGSYIALAI++ D+ A++YA Sbjct: 189 FAMPGLIWNTMMSVSGGWFFVVASEVISVVGRDNDQYLPGIGSYIALAIEQADIGAMVYA 248 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 LT+L +I +YDQ++FRP++ WS KF+ E++ A SW+L L +++ F + Sbjct: 249 GLTLLIIILIYDQVIFRPIVAWSEKFKFEQSEAQEVAQSWMLRLLQRSGFAGSLSAIGAA 308 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 + +R + + +D W+ +V V + W Sbjct: 309 IRRSVPTI---------PVREVPGSPVEVQPDPRPIDRAIDRVWYAIVIAVTLWAVWVLA 359 Query: 365 GYIVNH 370 Y+ Sbjct: 360 TYMFGS 365 Score = 220 bits (561), Expect = 5e-55, Method: Composition-based stats. Identities = 111/217 (51%), Positives = 140/217 (64%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + +VL +WLG +T RVV+ I I++++W P+G+WIG RP ++ QP AQ AAFPA Sbjct: 454 VAWSEVLECLWLGLLTTVRVVIWIGISTLVWTPIGVWIGLRPRVAQFAQPLAQFAAAFPA 513 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 N+ FP+ V ++ Y L NL+ + LMI G QWYILFNVIAG + PND KE A + G Sbjct: 514 NLLFPVAVVLIATYALPQNLFQAPLMILGAQWYILFNVIAGTVSIPNDLKEAAQVLGLRG 573 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W WWR +I+P IFP +VTG ITA GG+WNASIVSEV SWG L +GLGAYIA + Sbjct: 574 WAWWRKLIIPAIFPAFVTGGITASGGSWNASIVSEVVSWGATTLTLSGLGAYIAYWSTGE 633 Query: 551 SFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 P V LG+L+M VLA NR W LY RL Sbjct: 634 FNPHVGLGMLVMGSLVLAFNRLFWRWLYALAETRFRL 670 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 5/209 (2%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 TT+R++ + IS L R+ P+ + P VV Sbjct: 467 LLTTVRVVIWIGISTLVWTPIGVWIGLRPRVAQFAQPLAQFAAAFPANLLFPVAVV---- 522 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 L + L + W + F++ +IP DL+E ++ L GW + L + Sbjct: 523 LIATYALPQNLFQAPLMILGAQWYILFNVIAGTVSIPNDLKEAAQVLGLRGWAWWRKLII 582 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P P V + + G W + SE++ G T + L G+G+YIA + + M Sbjct: 583 PAIFPAFVTGGITASGGSWNASIVSEVVSWGATTLTLSGLGAYIAYWSTGEFNPHVGLGM 642 Query: 246 LTMLGVIFLYDQLLFRPMIVWSN-KFRLE 273 L M ++ +++L +R + + +FRL+ Sbjct: 643 LVMGSLVLAFNRLFWRWLYALAETRFRLD 671 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 81/215 (37%), Gaps = 6/215 (2%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 D + + + G T+FR+ + ++++ + V + I P L + P F Sbjct: 59 DPINLPYYGLRTVFRMFLAVLLSLLFTFTVATLAAKSRRAETVIIPALDFLQSLPILGFL 118 Query: 435 ----PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + + L + W + F+ P + +E A+ ++ Sbjct: 119 TVTTAIFIGMFRGSLLGLEAASIFAIFTSQVWNMAFSFYHSLITTPRELREAAAVLRLSP 178 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS--WGHIHLRTTGLGAYIAESTE 548 W+ + + +P P + + + G W + SEV S G+G+YIA + E Sbjct: 179 WKKFWNLDVPFAMPGLIWNTMMSVSGGWFFVVASEVISVVGRDNDQYLPGIGSYIALAIE 238 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + +V L + +L ++ ++ P+ + + Sbjct: 239 QADIGAMVYAGLTLLIIILIYDQVIFRPIVAWSEK 273 >gi|48478103|ref|YP_023809.1| sugar ABC transporter 1, permease protein [Picrophilus torridus DSM 9790] gi|48430751|gb|AAT43616.1| sugar ABC transporter 1, permease protein [Picrophilus torridus DSM 9790] Length = 537 Score = 256 bits (653), Expect = 1e-65, Method: Composition-based stats. Identities = 111/533 (20%), Positives = 215/533 (40%), Gaps = 27/533 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 TT+R+L ++S++ + A A KS+ + + ++++ +S+P++ F +V F+ Sbjct: 11 TGATTIRVLGLTLLSIVTGWFLAYGAIKSKYFENIYISVIEVFESVPVISFFPIVLVIFI 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G +G ELAA F +FT+ VWN+ + YQ+ +PR++EEV + L + K L Sbjct: 71 TRIGGP-LGVELAADFLVFTAVVWNIWMAEYQAFKTVPREMEEVVDNIDLGFFGKLSKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +PFS+P + N+ S+S G+F++ SE+I VG GIG+ + L + Sbjct: 130 IPFSIPRIAANLFPSVSDGFFYITVSEVIEVGTHTYQTFGIGTLLTDFSNNIFLTE--MS 187 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 +L M + LL ++ L+ + R+ + Sbjct: 188 LLGMSFFVIATIALLREYTKRAVARYTLDTDAP----------IIRRGRLNTRQTSRIAS 237 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 S N +L E F +L ++ + I + + + + I Sbjct: 238 VISK--NPFSRLSSYYRYQNLDIEEKFEKLEKKKKYYRYVYIAIGLFILILLLYGSASLI 295 Query: 365 GYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + + + +I RV +++I+ I I +G ++ S P Sbjct: 296 ISVKADQWFYLFSKTPEIIIYLAYDYARVATILLISLAIAIFLGYYLAVNKRAESVGIPI 355 Query: 422 AQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q L+A+PA ++FP V + ++ + T +Y+ ++ G A Sbjct: 356 IQTLSAYPAPIYFPFVFIFTLPFISKFFGPYTDEFYVLAIGFISTFYYVFYSFWMGVKAL 415 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHI 532 P+++ E+ + ++ ++ RYII+P FPY ++G + AW ++ E Sbjct: 416 PSEYWELMKNMNMGYFKKMRYIIIPAAFPYLISGISSTINSAWGGLMIGEYWPNIYGDKS 475 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 TGL I +T G+ I V+ + + + Sbjct: 476 LYVHTGLMKLIDVATANGNIELAAWASFIFSIVVVIYSILFTRKMMDLARKKY 528 Score = 93.5 bits (231), Expect = 1e-16, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 88/212 (41%), Gaps = 7/212 (3%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 Y + R+ + ++ISL A ++R V +PI+ + + P + F V F Sbjct: 316 YLAYDYARVATILLISLAIAIFLGYYLAVNKRAESVGIPIIQTLSAYPAPIYFPF-VFIF 374 Query: 124 MNLYPGKVIGAELAAIFAI---FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + K G + + F S + + +S + + +P + E+ ++ + ++K Sbjct: 375 TLPFISKFFGPYTDEFYVLAIGFISTFYYVFYSFWMGVKALPSEYWELMKNMNMGYFKKM 434 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQD 237 Y+ +P + P L+ + +++ W ++ E I ++ G+ I +A + Sbjct: 435 RYIIIPAAFPYLISGISSTINSAWGGLMIGEYWPNIYGDKSLYVHTGLMKLIDVATANGN 494 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 + +A V+ +Y L R M+ + K Sbjct: 495 IELAAWASFIFSIVVVIYSILFTRKMMDLARK 526 Score = 75.0 bits (183), Expect = 4e-11, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 5/200 (2%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L + T RV+ L +++ + + + + ++ + P FFP+ Sbjct: 5 LLIFLATGATTIRVLGLTLLSIVTGWFLAYGAIKSKYFENIYISVIEVFESVPVISFFPI 64 Query: 437 VVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 V+ L L L+ W I P + +EV + + + Sbjct: 65 VLVIFITRIGGPLGVELAADFLVFTAVVWNIWMAEYQAFKTVPREMEEVVDNIDLGFFGK 124 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + +P P + + VSEV G +T G+G + + + Sbjct: 125 LSKLYIPFSIPRIAANLFPSVSDGFFYITVSEVIEVGTHTYQTFGIGTLLTDFSNNIFLT 184 Query: 554 EVVLGVLIMCCFVLALNRFL 573 E+ +L M FV+A L Sbjct: 185 EM--SLLGMSFFVIATIALL 202 >gi|257075954|ref|ZP_05570315.1| sugar ABC transporter 1, permease protein [Ferroplasma acidarmanus fer1] Length = 540 Score = 256 bits (653), Expect = 1e-65, Method: Composition-based stats. Identities = 109/537 (20%), Positives = 222/537 (41%), Gaps = 34/537 (6%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 T R++ +++S+L + A + KS+ + + ++++ +SIP++ F +V F+ Sbjct: 12 LATAGRVIGLILLSILTGWFLAYASIKSKFFENIYIILIEVFESIPVITFFPVVLVIFIT 71 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G +G ELAA F +FT+ VWN+ YQ+ +PR++ EV + R + + YL + Sbjct: 72 HV-GGTLGVELAADFLVFTAVVWNIWMGEYQAFKTVPREMVEVVENSRFGLFSRLRYLYI 130 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 PFS+P + N+ S+S G+F++ SE+ VG GIGS + + L I A+ Sbjct: 131 PFSVPRITANLFPSVSNGFFYITVSEVFEVGVHTYQTFGIGSVLDTFVAGAQLFNIEMAL 190 Query: 246 LTMLGVIFLYDQLLFRPMIVWS-NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 L +LG++ + ++ R ++ ++ L+ + L + Sbjct: 191 L-ILGIVIVAIVIVLREFSKYAVGRYTLDTDAPVMKRGRLNL-------------RETAR 236 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 F+ LS N L R ++ + Q + + + + + + + Sbjct: 237 VFAALSKNP--LTRLARYYKYREGDKHEQTYEKKEKKQKRYKYIYASIGIIILIALLYGV 294 Query: 365 GYIVNHFTYQDV-------LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 ++ + +++ RV +++++ +I I +G ++ Sbjct: 295 VSLIISVKPSEWSILFNKTPFLLTGLGFDYVRVGSILLVSMVIAIFLGYYLAVNKRAEKY 354 Query: 418 IQPFAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 P Q L+A+PA ++FP + + L++ L T +Y+ ++ G Sbjct: 355 WIPIIQSLSAYPAPIYFPFLFILTEPFMLSLFGGFTNELYVLSLGFVSTFYYVFYSFWMG 414 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---AS 528 A P+++ E+ + + ++ R +I+P FPY ++G + AW ++ E Sbjct: 415 VKAMPSEYWEITKNLKLGYFKKMRKVIIPSTFPYLISGISSTINSAWGGLMIGEYWPNIY 474 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 H TGL I +T G G LI V + + + Sbjct: 475 GTHSLSVHTGLMKTIDIATANGDLTLAAWGSLIFGIIVAIYSVLFTRKMMDLAQKKY 531 Score = 71.9 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 3/191 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ +I T RV+ LI+++ + + + ++ + P FFP Sbjct: 4 IILIILAVLATAGRVIGLILLSILTGWFLAYASIKSKFFENIYIILIEVFESIPVITFFP 63 Query: 436 LVVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 +V+ L L L+ W I P + EV + + Sbjct: 64 VVLVIFITHVGGTLGVELAADFLVFTAVVWNIWMGEYQAFKTVPREMVEVVENSRFGLFS 123 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 RY+ +P P + + VSEV G +T G+G+ + Sbjct: 124 RLRYLYIPFSVPRITANLFPSVSNGFFYITVSEVFEVGVHTYQTFGIGSVLDTFVAGAQL 183 Query: 553 PEVVLGVLIMC 563 + + +LI+ Sbjct: 184 FNIEMALLILG 194 >gi|13541218|ref|NP_110906.1| ABC-type nitrate transport permease [Thermoplasma volcanium GSS1] gi|14324606|dbj|BAB59533.1| ABC transport system ATP-binding protein PA [Thermoplasma volcanium GSS1] Length = 541 Score = 255 bits (651), Expect = 2e-65, Method: Composition-based stats. Identities = 110/534 (20%), Positives = 219/534 (41%), Gaps = 25/534 (4%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T R+L ++IS++ + A LA K + + + ++++ +S+P++ F ++ F+ Sbjct: 11 TLATAGRVLGLILISIVTGWFLAYLAIKGKFFENIYIALIEVFESVPVISFFPIVLIIFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G +G ELAA F +FT+ VWN+ YQ+ +P+++ EV+ ++R+S + + Sbjct: 71 TRIGGP-LGVELAADFLVFTAVVWNIWMGEYQAFKTVPKEMIEVADNYRMSFLSRMARIY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +PFS P + N+ S+S G+F++ SE+ VG GIGS + + A Sbjct: 130 IPFSYPRIAANLFPSVSDGFFYITVSEVFTVGIHTYATFGIGSVLDSLAPTGKTNYVYLA 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVW-SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 +L + VI +L R + +K+ ++ I L + + T L I + Sbjct: 190 LLVLAVVIGAIIYIL-REFSRYVVSKYTIDTDAPIIRRGR--LSVKQTTRILSVIATN-- 244 Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363 PLS E +++ + ++ + + A+ Sbjct: 245 ----PLSRLAGYYRSRYPGQNSEVFEK--DEYPQRKIGSYVMSGIGIIILILLVYSAYSV 298 Query: 364 IGYIVNHFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 I ++ V ++ RV +++++ II I +G + P Sbjct: 299 ISATPTALWHKLVSITPRIVVYLLYDYGRVATILVVSFIISIFLGYSLAIHTRAEGIGVP 358 Query: 421 FAQLLAAFPANVFFPLVVSCV------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 Q+L+A+P ++FP V + + ++ L T +Y+ ++ G A Sbjct: 359 LLQVLSAYPPPIYFPFVFAASYTWIHNLMGPVTNEFFVIGLGFISTFYYMFYSFWMGVKA 418 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGH 531 P+++ EV + ++ ++ R IILPG FPY ++G + AW ++ E Sbjct: 419 LPSEYFEVMKNLNLGFFKKMRMIILPGTFPYLISGISSTINSAWGGLMIGEYWPDIVGDK 478 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 G+ +I TE G+ I V+ + + + Sbjct: 479 TLQIHYGIMKFIDIQTEAGNIAYAGWASFIFGIVVVIYSILFTRRMMDLARKRY 532 Score = 91.9 bits (227), Expect = 3e-16, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 7/212 (3%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 Y R+ + +V+S + + A R + VP+L ++ + P + F Sbjct: 320 YLLYDYGRVATILVVSFIISIFLGYSLAIHTRAEGIGVPLLQVLSAYPPPIYFPFVFAA- 378 Query: 124 MNLYPGKVIGAELAAIFAI---FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + ++G F I F S + M +S + + +P + EV ++ L ++K Sbjct: 379 SYTWIHNLMGPVTNEFFVIGLGFISTFYYMFYSFWMGVKALPSEYFEVMKNLNLGFFKKM 438 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM---IVVGDTVIPLPGIGSYIALAIKEQD 237 + +P + P L+ + +++ W ++ E IV T+ GI +I + + + Sbjct: 439 RMIILPGTFPYLISGISSTINSAWGGLMIGEYWPDIVGDKTLQIHYGIMKFIDIQTEAGN 498 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 + +A V+ +Y L R M+ + K Sbjct: 499 IAYAGWASFIFGIVVVIYSILFTRRMMDLARK 530 Score = 83.4 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 71/201 (35%), Gaps = 3/201 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 VL +I T RV+ LI+I+ + + + ++ + P FFP Sbjct: 4 VLLIILATLATAGRVLGLILISIVTGWFLAYLAIKGKFFENIYIALIEVFESVPVISFFP 63 Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 +V+ L L L+ W I P + EVA ++ ++ Sbjct: 64 IVLIIFVTRIGGPLGVELAADFLVFTAVVWNIWMGEYQAFKTVPKEMIEVADNYRMSFLS 123 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 I +P +P + + VSEV + G T G+G+ + G Sbjct: 124 RMARIYIPFSYPRIAANLFPSVSDGFFYITVSEVFTVGIHTYATFGIGSVLDSLAPTGKT 183 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 V L +L++ + A+ L Sbjct: 184 NYVYLALLVLAVVIGAIIYIL 204 >gi|70606098|ref|YP_254968.1| ABC transporter [Sulfolobus acidocaldarius DSM 639] gi|68566746|gb|AAY79675.1| ABC transporter [Sulfolobus acidocaldarius DSM 639] Length = 543 Score = 254 bits (649), Expect = 4e-65, Method: Composition-based stats. Identities = 119/536 (22%), Positives = 221/536 (41%), Gaps = 27/536 (5%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T R+ + +S++ + LA KS + + V +++I +S+P+ FL +++F+ Sbjct: 11 TLFTLGRVWITIALSIITGWFLGYLAIKSHVVENIYVSLIEIFESVPVFSFLPIVLIFFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G +G +LA +F +FT+ VWN+ +YQ+ IP+D+ EVS ++R S KF L Sbjct: 71 FTIGGN-LGIQLAVLFLVFTAVVWNIWMGIYQAYKTIPQDMLEVSENYRFSLMDKFSKLY 129 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P+SMP + N+ S F++ SE+ +G++ + GIGS I + L Sbjct: 130 IPYSMPRIASNLFPSFVNALFYITVSEVFSIGNSQYQVFGIGSLINYFVNNGLYNDALIG 189 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 ++ ++ + ++ L+ R + E + D+ + RK L S + Sbjct: 190 IVILIIWVIIF-TLVLRELA--------EYIISRFGLDTEIKV--RKRGRLSIRYSSRIS 238 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 + K R + R + + + + I + SI Sbjct: 239 SGLSTIVKLGKAFTIPVARRSVRQVRVEEEKERSRAANLWKYVGISISVLILSFILYGSI 298 Query: 365 GYIVN------HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 I++ + + + + + RV V+ +I+ +I I +G +I I I Sbjct: 299 SVIISVPLATWSYLVSNTPFALLSIAVDYIRVAVVTLISLLITIFLGYFIVVHKRIERVI 358 Query: 419 QPFAQLLAAFPANVFFPLVVSCVS------YYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 P Q++AA PA V+FP + + + ++ LL T +Y F+ G Sbjct: 359 LPLIQIVAAIPAPVYFPFLYAFSISFISHLFGAFTNEFYVLLLGFLSTFYYSFFSYYIGV 418 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASW 529 ++ P F E+ ++ ++ W+ R IILP PY +TG + W ++E + Sbjct: 419 TSMPVQFWEIMKNYELSFWQKLRQIILPSTMPYLITGITSTVNSTWGGLAIAEYWPNITQ 478 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 H TGL I T +G LI V+ + L + Sbjct: 479 DHNLYVRTGLMKDIVLFTNQGEIALASWFSLIFAIVVVVYSILFTRKLMDLARKKY 534 Score = 77.3 bits (189), Expect = 7e-12, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 3/180 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 +L + T+ RV + I ++ I +G + + ++ + P F P Sbjct: 4 ILETVIATLFTLGRVWITIALSIITGWFLGYLAIKSHVVENIYVSLIEIFESVPVFSFLP 63 Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 +V+ + +L L + L+ W I + P D EV+ ++ + Sbjct: 64 IVLIFFVFTIGGNLGIQLAVLFLVFTAVVWNIWMGIYQAYKTIPQDMLEVSENYRFSLMD 123 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + + +P P + + A VSEV S G+ + G+G+ I G + Sbjct: 124 KFSKLYIPYSMPRIASNLFPSFVNALFYITVSEVFSIGNSQYQVFGIGSLINYFVNNGLY 183 >gi|327311383|ref|YP_004338280.1| binding-protein-dependent transport systems inner membrane component [Thermoproteus uzoniensis 768-20] gi|326947862|gb|AEA12968.1| binding-protein-dependent transport systems inner membrane component [Thermoproteus uzoniensis 768-20] Length = 543 Score = 254 bits (648), Expect = 4e-65, Method: Composition-based stats. Identities = 116/533 (21%), Positives = 219/533 (41%), Gaps = 27/533 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L+ + S++ ++ +A KS+ V ++ + +S+P+ V+ F Sbjct: 14 STARVLALIGASIVTGWLLGYIAIKSKVFENVYTSLIGVFESVPVFS-FFPVVLVFFVSG 72 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G +GAELAA F +FT+ VWN+ +YQ+ +PR++ EV+ + RL + +L +P+ Sbjct: 73 IGGYLGAELAADFLVFTAVVWNIWIGIYQAFKTVPREMVEVAENVRLGFLSRMRHLYIPY 132 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA--- 244 SMP + N+M S S G+F++ SE+ VG + + GIGS IA E + + Sbjct: 133 SMPRIAANLMPSFSDGFFYITVSEVFSVGSSQYSVFGIGSVIAELTAEGNWGNPAFVHRY 192 Query: 245 --MLTMLGVIFLYDQLLFRPMIVW-SNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 L ML + FR + + + K+ ++ + + R ++ Sbjct: 193 LFALGMLALAVGSVIYGFRELANYVAGKYAIDSSMPVR----------RIRLIPPWLARG 242 Query: 302 SWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW 361 + ++ + R + E + + + + VV AI + Sbjct: 243 VGGPLARIARITAAVQRRATREPVWYEEEKGHEHLFKVIGAAVGLAMLGVVIYGAISVIT 302 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + + ++ + RV + +++ + + +G ++ + + P Sbjct: 303 STPASLWRGL-LDQTGQILLALALDYGRVFAITLLSMALAVTLGYYLATHHEVERVVVPA 361 Query: 422 AQLLAAFPANVFFPLV------VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 Q+ AA+PA V+FPL+ V + L+ LL T +Y+ ++ G A Sbjct: 362 IQVFAAYPAPVYFPLIFAATYPVIYGVLGYYGNELYAILLGFISTFYYVFYSFWMGLKAM 421 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV---ASWGHI 532 P++ E+ + +++ W R I+LP PY V G + AW + E GH Sbjct: 422 PHEIWELMDNLNLSYWGRLRLILLPAAMPYLVAGISSTIDSAWGGLAIGEYWPGIYDGHD 481 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 GL I ST +G+ LI V+ F L + Sbjct: 482 LAVGNGLMKLIVISTAEGNIALAAWASLIFGVVVVLFAIFFTRRLMDLAQKKY 534 Score = 65.7 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 3/179 (1%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L + ++ RV+ LI + + +G + + + P FFP+ Sbjct: 5 LEIALATAVSTARVLALIGASIVTGWLLGYIAIKSKVFENVYTSLIGVFESVPVFSFFPV 64 Query: 437 VVSCV---SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 V+ +L L L+ W I + P + EVA + + Sbjct: 65 VLVFFVSGIGGYLGAELAADFLVFTAVVWNIWIGIYQAFKTVPREMVEVAENVRLGFLSR 124 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R++ +P P + + + VSEV S G G+G+ IAE T +G++ Sbjct: 125 MRHLYIPYSMPRIAANLMPSFSDGFFYITVSEVFSVGSSQYSVFGIGSVIAELTAEGNW 183 >gi|119718931|ref|YP_919426.1| binding-protein-dependent transport systems inner membrane component [Thermofilum pendens Hrk 5] gi|119524051|gb|ABL77423.1| binding-protein-dependent transport systems inner membrane component [Thermofilum pendens Hrk 5] Length = 497 Score = 249 bits (637), Expect = 7e-64, Method: Composition-based stats. Identities = 127/520 (24%), Positives = 250/520 (48%), Gaps = 36/520 (6%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L S + RM A ++SLL V +L A+++ + +++P+LDI+QSIPILGF Sbjct: 3 ALLIAVSASLARMAEAYIVSLLIALVLGSLMARNKVVESIMLPVLDILQSIPILGFFPAA 62 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F+ P + +G E AA+F I TS VWNM F +Y S+ ++ + +++R + L + Sbjct: 63 LAMFIANLP-RALGVEAAAVFLIVTSLVWNMIFGVYASIKSLEPSVFDMARVYSLGAVSR 121 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F+Y+ VP S L+ N ++S +GGWFF+ A+E+I +G+ L GIG++I + D Sbjct: 122 FFYIYVPASRAALLANSLISWAGGWFFLTAAEVITLGEEEYKLTGIGAFIMESYNRGDYA 181 Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299 + + + I LL+ P + + Sbjct: 182 SFYIGVAALFATIMATYVLLWNPAVK---------------------------SVRDLPL 214 Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 S F+ S V ++ LG E + + + ++ + + VA+ Sbjct: 215 PSVSAFYEKFSEVVSRVWSGLG-------EALVWVEARVKLPGFVPRVVGATLLVVALFY 267 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 + +++ + +++ RV ++++ + ++ + + + I Sbjct: 268 LGSGVAGLLSLDVVGVAKSFLHELPLSLARVSIVLVFSLVLSLLIAYLTYSFRRAAMLIG 327 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA-GASAFPND 478 +LLA+ PA +++PL+ + P + L +++ G+ WY+ FN++ G + + Sbjct: 328 ASGELLASVPAIIWWPLLGYVALTFSWGPLVVLFTVLLQGSLWYLYFNILVFGLGSIRKE 387 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 +E+A+ + + GW ++R I P +FP +TGA+++ GGAWNA+I +E + G + G Sbjct: 388 HEELAAVYGVKGWHFFRSIFFPSVFPSLLTGALSSWGGAWNATIAAEYVTLGQRTIDLGG 447 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 +GA + T +G + L L + ++A+++ +W L+ Sbjct: 448 VGALLNRYTVEGEAGKTALAALFLSLVIVAVDKAVWARLF 487 Score = 99.6 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 86/204 (42%), Gaps = 3/204 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 +L ++ ++ R+ I++ +I + +G + + S + P +L + P FFP Sbjct: 1 MLALLIAVSASLARMAEAYIVSLLIALVLGSLMARNKVVESIMLPVLDILQSIPILGFFP 60 Query: 436 LVVSCVSYY---HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 ++ L L++ W ++F V A + ++A + + Sbjct: 61 AALAMFIANLPRALGVEAAAVFLIVTSLVWNMIFGVYASIKSLEPSVFDMARVYSLGAVS 120 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + YI +P + ++ + G W +EV + G + TG+GA+I ES +G + Sbjct: 121 RFFYIYVPASRAALLANSLISWAGGWFFLTAAEVITLGEEEYKLTGIGAFIMESYNRGDY 180 Query: 553 PEVVLGVLIMCCFVLALNRFLWHP 576 +GV + ++A LW+P Sbjct: 181 ASFYIGVAALFATIMATYVLLWNP 204 Score = 77.3 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 10/226 (4%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY----ATLAAKSRRLGMVLVPILDIMQS 109 ++LDV + + L+ + I L+F+ V A L RR M++ +++ S Sbjct: 276 LSLDVVGVAKSFLHELPLSLARVSIVLVFSLVLSLLIAYLTYSFRRAAMLIGASGELLAS 335 Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ-SLCNIPRDLEEV 168 +P + + + G + + +W + F++ L +I ++ EE+ Sbjct: 336 VPAIIWWPL----LGYVALTFSWGPLVVLFTVLLQGSLWYLYFNILVFGLGSIRKEHEEL 391 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 + + + GW F + P P L+ + S G W +A+E + +G I L G+G+ Sbjct: 392 AAVYGVKGWHFFRSIFFPSVFPSLLTGALSSWGGAWNATIAAEYVTLGQRTIDLGGVGAL 451 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-RPMIVWSNKFRLE 273 + E + A L + VI D+ ++ R S KF E Sbjct: 452 LNRYTVEGEAGKTALAALFLSLVIVAVDKAVWARLFSRLSGKFAGE 497 >gi|291295407|ref|YP_003506805.1| binding-protein-dependent transport systems inner membrane component [Meiothermus ruber DSM 1279] gi|290470366|gb|ADD27785.1| binding-protein-dependent transport systems inner membrane component [Meiothermus ruber DSM 1279] Length = 671 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 153/350 (43%), Positives = 211/350 (60%), Gaps = 12/350 (3%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-VPITLDVHSLPQYAS 66 P + R + +DL+ V+ ++ +L ++ T P + ++L+ LP Y Sbjct: 8 PEVLRPRAPFSRWDLVVIPGVLVLLLLLTLALRGATAPYGPNTPDLTVSLNPAHLPYYGL 67 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 RT LRML+A+++SL FT VYAT+AAK R VL+P+LD +QS+PILGFLT T F+ L Sbjct: 68 RTLLRMLAALLLSLAFTLVYATIAAKVPRTERVLIPLLDFLQSLPILGFLTATTAIFLGL 127 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + G + G E A+IFAIFTSQVWNMTFS Y SL +PR+L+E + RLS WQ+FW L VP Sbjct: 128 FRGNLFGLEAASIFAIFTSQVWNMTFSFYASLRTVPRELQEAAAMLRLSPWQRFWKLEVP 187 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVV--GDTVIPLPGIGSYIALAIKEQDLLAILYA 244 F +P LVWN MMS+SGGWFFVVASE+I V D LPG+G+YIALAI++ D A+L+A Sbjct: 188 FGLPNLVWNAMMSVSGGWFFVVASEVISVVGRDQDQYLPGVGAYIALAIQQADAQAMLWA 247 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 LT+ ++ LYDQLLFRP++ W+ KF+ E++ A SWVL L ++ F + I Sbjct: 248 GLTLFLLVLLYDQLLFRPVVAWAEKFKFEQSESSDTAQSWVLTLLQRARFSQRIARLPQP 307 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 + L L R H P L+ R+ L F ++ Sbjct: 308 LWEWLW---------LKSARGHRPGVALEPPPKPRLRSHLADLGFNLLIA 348 Score = 225 bits (575), Expect = 1e-56, Method: Composition-based stats. Identities = 110/238 (46%), Positives = 148/238 (62%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 V + A Q+ + +VL V LG T RV +++ ++IW+P+G+++G Sbjct: 433 GVWAPANLAAACQAPLAPAGKVAWPEVLEVFKLGFFTALRVTFFVLLVTLIWLPIGVYVG 492 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 RP ++ +QP AQ AAFPAN+ FPL V ++++ LNP +W+S LM+ G QWYILFN I Sbjct: 493 LRPRLTQWVQPLAQFGAAFPANLLFPLFVVAIAHFRLNPEIWVSPLMVLGGQWYILFNAI 552 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 AG++A PND KE A + + GW WR +ILP IFP +VTG ITA GG+WNASIV+EV W Sbjct: 553 AGSAAIPNDLKEAARLYGLRGWNRWRRLILPAIFPAFVTGGITATGGSWNASIVAEVVQW 612 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 G L TGLGAYIA + P V LG+L+M +VLA NR +W LY RL Sbjct: 613 GDTTLVATGLGAYIARWSTGEFNPHVGLGMLVMGLWVLAYNRLIWQRLYQLAEERYRL 670 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 5/209 (2%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 T LR+ +++ L RL + P+ + P F+ Sbjct: 467 FFTALRVTFFVLLVTLIWLPIGVYVGLRPRLTQWVQPLAQFGAAFPANLLFPL----FVV 522 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + E+ + W + F+ IP DL+E +R + L GW ++ L + Sbjct: 523 AIAHFRLNPEIWVSPLMVLGGQWYILFNAIAGSAAIPNDLKEAARLYGLRGWNRWRRLIL 582 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P P V + + G W + +E++ GDT + G+G+YIA + + M Sbjct: 583 PAIFPAFVTGGITATGGSWNASIVAEVVQWGDTTLVATGLGAYIARWSTGEFNPHVGLGM 642 Query: 246 LTMLGVIFLYDQLLFRPMIVWS-NKFRLE 273 L M + Y++L+++ + + ++RL+ Sbjct: 643 LVMGLWVLAYNRLIWQRLYQLAEERYRLD 671 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 6/178 (3%) Query: 412 PHISSKIQPFAQLLAAFPANVFF----PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 P + P L + P F + + + W + F+ Sbjct: 95 PRTERVLIPLLDFLQSLPILGFLTATTAIFLGLFRGNLFGLEAASIFAIFTSQVWNMTFS 154 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 A P + +E A+ ++ W+ + + +P P V A+ + G W + SEV Sbjct: 155 FYASLRTVPRELQEAAAMLRLSPWQRFWKLEVPFGLPNLVWNAMMSVSGGWFFVVASEVI 214 Query: 528 S--WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 S G+GAYIA + ++ ++ L + VL ++ L+ P+ + + Sbjct: 215 SVVGRDQDQYLPGVGAYIALAIQQADAQAMLWAGLTLFLLVLLYDQLLFRPVVAWAEK 272 >gi|255513790|gb|EET90055.1| binding-protein-dependent transport systems inner membrane component [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 528 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 125/533 (23%), Positives = 224/533 (42%), Gaps = 21/533 (3%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL S + LRM +A+ IS++ + AA+SR V++PILDI Q++PIL F F Sbjct: 9 SLIIDTSASWLRMFAALFISVIVSIFVGIWAARSRGAERVIIPILDIFQTLPILAFFPFV 68 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + + PG +IG A IF I TS VWN+TF +Y+S+ +P++ EV+ +R+ + Sbjct: 69 IFVVVATLPG-MIGINAAVIFLIVTSMVWNITFGVYESIKAMPKEFLEVASLYRMGLLDR 127 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP-GIGSYIALAIKEQDL 238 + +P +MP +V ++S S G F++V SE+ G+ + GIG I + Sbjct: 128 LRRIFIPATMPRVVEQSVLSWSIGLFYLVTSEIFSTGNANYAVKYGIGVAITKFALSGNT 187 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI 298 A A+ + + L F P+ +++ + + + I Sbjct: 188 EAYALALAVFIAFVIATRFLFFMPLERRYSRYMKSAS-------------KQGGAIAKMI 234 Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358 ++ F+ + + + F +A+ Sbjct: 235 TFAKRRIFTAQRRPGTGAPKPEKPRMQKSAAVRPVDKVPKEERLGRNYRAFYYAVALAVL 294 Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 A S Y+ + ++ RV + I I +P+ ++ F + Sbjct: 295 AAVLSYLYLYYPQLLGYEALALMSLVVSFTRVWGVFAIILAIALPLCAYLVFISKHQNTY 354 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 Q++A+ PA + P++V + Y L+ L ++ WY++F++IA Sbjct: 355 LLVFQVVASIPATILLPVLVVALEGYPLHSELVAIVVYFLSGIWYVIFSIIASTRTLSPS 414 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS------WGHI 532 EV F I G +R I L + P +TGA+T WNASIV+E + I Sbjct: 415 VLEVKKLFGIKGTTAFRKIYLMAMLPGVITGAVTGIAAEWNASIVAEYFTSTAIGNGAVI 474 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 TG+G + S G+ +++ +L + ++ +N+F+W Y + Sbjct: 475 TAVHTGIGRLLDVSLGTGNLTLMLIALLNLTVMIILINKFVWKRFYKKIEKVY 527 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 8/214 (3%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ +I + R+ + I+ I+ I VGIW I P + P FFP Sbjct: 7 LVSLIIDTSASWLRMFAALFISVIVSIFVGIWAARSRGAERVIIPILDIFQTLPILAFFP 66 Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ V + N + L++ W I F V A P +F EVAS + + Sbjct: 67 FVIFVVVATLPGMIGINAAVIFLIVTSMVWNITFGVYESIKAMPKEFLEVASLYRMGLLD 126 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH-IHLRTTGLGAYIAESTEKGS 551 R I +P P V ++ + + SE+ S G+ + G+G I + G+ Sbjct: 127 RLRRIFIPATMPRVVEQSVLSWSIGLFYLVTSEIFSTGNANYAVKYGIGVAITKFALSGN 186 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 L + + FV+A + PL R Sbjct: 187 TEAYALALAVFIAFVIATRFLFFMPL----ERRY 216 >gi|312797024|ref|YP_004029946.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454] gi|312168799|emb|CBW75802.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 212 Score = 229 bits (583), Expect = 2e-57, Method: Composition-based stats. Identities = 117/195 (60%), Positives = 148/195 (75%) Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 I IAS++W+P+G+ IG RP ++ K+QP AQ LAAFPAN+ FP+ V + + LNP++WL Sbjct: 17 AIAIASVVWVPLGVLIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIVRFGLNPDIWL 76 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 S L++ GTQWYILFNVIAGASA+PNDFKE A++F I GW+WWR ++LPGIFPYYVTGAIT Sbjct: 77 SPLIVLGTQWYILFNVIAGASAYPNDFKEAATNFRIRGWQWWRQVMLPGIFPYYVTGAIT 136 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A GGAWNASIVSE WG H+ GLGAYIA+ T G +P+++LG+ +M FV NR Sbjct: 137 ASGGAWNASIVSEAVQWGDTHVVAHGLGAYIAQMTTNGDYPKIILGIAMMSLFVTLFNRL 196 Query: 573 LWHPLYLYGTRCLRL 587 LW P+Y Y LRL Sbjct: 197 LWRPMYAYAENKLRL 211 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 4/194 (2%) Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A+ I+ + L L L P+ + + P V+ + + Sbjct: 17 AIAIASVVWVPLGVLIGLRPALAEKLQPLAQFLAAFPANLLFPVFVIVIVRFG----LNP 72 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 ++ I W + F++ P D +E + +FR+ GWQ + + +P P V Sbjct: 73 DIWLSPLIVLGTQWYILFNVIAGASAYPNDFKEAATNFRIRGWQWWRQVMLPGIFPYYVT 132 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + + G W + SE + GDT + G+G+YIA D I+ + M + L Sbjct: 133 GAITASGGAWNASIVSEAVQWGDTHVVAHGLGAYIAQMTTNGDYPKIILGIAMMSLFVTL 192 Query: 255 YDQLLFRPMIVWSN 268 +++LL+RPM ++ Sbjct: 193 FNRLLWRPMYAYAE 206 >gi|167718236|ref|ZP_02401472.1| putative transmembrane transporter [Burkholderia pseudomallei DM98] Length = 277 Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats. Identities = 123/257 (47%), Positives = 161/257 (62%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 L + + W + A+ + ++ D+ V G +T+ RV Sbjct: 20 RLSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARV 79 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 +VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P + Sbjct: 80 LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAI 139 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGA Sbjct: 140 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 199 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+N Sbjct: 200 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMN 259 Query: 571 RFLWHPLYLYGTRCLRL 587 R +W PLY + R RL Sbjct: 260 RLIWRPLYAFAERRSRL 276 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 7/245 (2%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTF 84 + + + L ++ L L A + T R+L + ++ + Sbjct: 32 IARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWV 91 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 L R ++ P+ + + P V + + + + Sbjct: 92 PAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LAPAIWLSPLMIL 147 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 W + F++ P DL+E + S R+ + + +P +P V + + G W Sbjct: 148 GTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAW 207 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ Sbjct: 208 NASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLY 267 Query: 265 VWSNK 269 ++ + Sbjct: 268 AFAER 272 >gi|167909681|ref|ZP_02496772.1| putative transmembrane transporter [Burkholderia pseudomallei 112] Length = 266 Score = 224 bits (570), Expect = 4e-56, Method: Composition-based stats. Identities = 123/257 (47%), Positives = 161/257 (62%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 L + + W + A+ + ++ D+ V G +T+ RV Sbjct: 9 RLSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARV 68 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 +VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P + Sbjct: 69 LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAI 128 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGA Sbjct: 129 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 188 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+N Sbjct: 189 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMN 248 Query: 571 RFLWHPLYLYGTRCLRL 587 R +W PLY + R RL Sbjct: 249 RLIWRPLYAFAERRSRL 265 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 7/245 (2%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTF 84 + + + L ++ L L A + T R+L + ++ + Sbjct: 21 IARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWV 80 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 L R ++ P+ + + P V + + + + Sbjct: 81 PAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LAPAIWLSPLMIL 136 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 W + F++ P DL+E + S R+ + + +P +P V + + G W Sbjct: 137 GTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAW 196 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ Sbjct: 197 NASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLY 256 Query: 265 VWSNK 269 ++ + Sbjct: 257 AFAER 261 >gi|167917693|ref|ZP_02504784.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 257 Score = 223 bits (569), Expect = 7e-56, Method: Composition-based stats. Identities = 122/256 (47%), Positives = 160/256 (62%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 + + + W A+ + ++ D+ V G +T+ RV+ Sbjct: 1 MSTRGRAWAGRIARVAWLAPCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVL 60 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +W Sbjct: 61 VLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIW 120 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 LS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAI Sbjct: 121 LSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAI 180 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 TA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+NR Sbjct: 181 TASGGAWNASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNR 240 Query: 572 FLWHPLYLYGTRCLRL 587 +W PLY + R RL Sbjct: 241 LIWRPLYAFAERRSRL 256 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 90/245 (36%), Gaps = 7/245 (2%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTF 84 + + + ++ L L A + T R+L + ++ + Sbjct: 12 IARVAWLAPCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWV 71 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 L R ++ P+ + + P V + + + + Sbjct: 72 PAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LVPAIWLSPLMIL 127 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 W + F++ P DL+E + S R+ + + +P +P V + + G W Sbjct: 128 GTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAW 187 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ Sbjct: 188 NASIVSELVVWGHTTLDARGLGAYVARATASGSYPRIALGVATMSLLVIAMNRLIWRPLY 247 Query: 265 VWSNK 269 ++ + Sbjct: 248 AFAER 252 >gi|167737268|ref|ZP_02410042.1| putative transmembrane transporter [Burkholderia pseudomallei 14] Length = 261 Score = 223 bits (568), Expect = 8e-56, Method: Composition-based stats. Identities = 123/257 (47%), Positives = 161/257 (62%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 L + + W + A+ + ++ D+ V G +T+ RV Sbjct: 4 RLSTRGRAWAGRIARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARV 63 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 +VLI +A+++W+P G+ IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P + Sbjct: 64 LVLIGVATVVWVPAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLAPAI 123 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 WLS LMI GTQWYILFNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGA Sbjct: 124 WLSPLMILGTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGA 183 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ITA GGAWNASIVSE+ WGH L GLGAY+A +T GS+P + LGV M V+A+N Sbjct: 184 ITASGGAWNASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMN 243 Query: 571 RFLWHPLYLYGTRCLRL 587 R +W PLY + R RL Sbjct: 244 RLIWRPLYAFAERRSRL 260 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 7/245 (2%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTF 84 + + + L ++ L L A + T R+L + ++ + Sbjct: 16 IARVAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWV 75 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 L R ++ P+ + + P V + + + + Sbjct: 76 PAGVLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LAPAIWLSPLMIL 131 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 W + F++ P DL+E + S R+ + + +P +P V + + G W Sbjct: 132 GTQWYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAW 191 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ Sbjct: 192 NASIVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLY 251 Query: 265 VWSNK 269 ++ + Sbjct: 252 AFAER 256 >gi|167844449|ref|ZP_02469957.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] Length = 243 Score = 219 bits (559), Expect = 9e-55, Method: Composition-based stats. Identities = 122/242 (50%), Positives = 159/242 (65%) Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVG 405 + W + A+ + ++ D+ V G +T+ RV+VLI +A+++W+P G Sbjct: 1 VAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAG 60 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 + IG RP ++ +QP AQ LAAFPAN+ FPL V + + L P +WLS LMI GTQWYIL Sbjct: 61 VLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFGLVPAIWLSPLMILGTQWYIL 120 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 FNVIAGASAFP+D KE A+S + WWR ++LPGI PYYVTGAITA GGAWNASIVSE Sbjct: 121 FNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNASIVSE 180 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + WGH L GLGAY+A +T GS+P + LGV M V+A+NR +W PLY + R Sbjct: 181 LVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFAERRS 240 Query: 586 RL 587 RL Sbjct: 241 RL 242 Score = 116 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 7/242 (2%) Query: 31 IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA---SRTTLRMLSAMVISLLFTFVYA 87 + + L ++ L L A + T R+L + ++ + Sbjct: 1 VAWLALCSAAAVYAGIALLRTTAPALSWSDLADVARNGALTLARVLVLIGVATVVWVPAG 60 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L R ++ P+ + + P V + + + + Sbjct: 61 VLIGLRPRATALVQPVAQFLAAFPANLLFPLAVFAIVRFG----LVPAIWLSPLMILGTQ 116 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + F++ P DL+E + S R+ + + +P +P V + + G W Sbjct: 117 WYILFNVIAGASAFPDDLKEAAASLRVRTPTWWREVMLPGILPYYVTGAITASGGAWNAS 176 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + SE++V G T + G+G+Y+A A I + TM ++ ++L++RP+ ++ Sbjct: 177 IVSELVVWGHTTLDARGLGAYVARATAAGSYPRIALGVATMSLLVIAMNRLIWRPLYAFA 236 Query: 268 NK 269 + Sbjct: 237 ER 238 >gi|18312383|ref|NP_559050.1| sulfonate transport permease protein, putative [Pyrobaculum aerophilum str. IM2] gi|18159835|gb|AAL63232.1| sulfonate transport permease protein, putative [Pyrobaculum aerophilum str. IM2] Length = 453 Score = 219 bits (558), Expect = 1e-54, Method: Composition-based stats. Identities = 133/519 (25%), Positives = 228/519 (43%), Gaps = 73/519 (14%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T RM A++I++ + A KSRR+ ++P+LD++QS+PILGF + F+ Sbjct: 6 LLATFGRMAIALLITIAVAYAVAYAMHKSRRVESFVLPVLDVLQSVPILGFFPIALYVFI 65 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L+P V+GAELAAIF IFTS WN+ FS+YQS +P + +++R + L+ + ++ Sbjct: 66 YLFP--VVGAELAAIFLIFTSMAWNIIFSVYQSFKTMPSEYVDMARIY-LNERLELAHVY 122 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++ G+ +N+ +S + +FF+ ASE+I +G T I L GIGS + A D Sbjct: 123 IPAALRGIYYNIPVSWANAFFFITASEVITLG-TEIRLFGIGSLVVEAFNAGDYATAYIG 181 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + L L+R + P +S L + +L++ G+ Sbjct: 182 IAAGALANSLLYLTLWRKLTR----------EVPQPPNSLAESL---SAWLKY-GWYVVV 227 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 + L FL+ + + + V ++ ++ Sbjct: 228 ALTALFITAVGYYVAKAPPSLPQLGEFLRGAAESAEALPPSLLRVVAVLAISGAAGLAAL 287 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 +V ++ I +G L Sbjct: 288 YSVVKKPGWE-----------------------------TAILLGTS------------L 306 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L++ PA +PL+ + V L LL++ G Y + N IA P D A Sbjct: 307 LSSIPAVFLYPLLGAVV-----KGELLAILLLMPGALIYSVLNTIAAWRDVPQDL---AR 358 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 ++ I G ++ +I++P PY +TG +T GGAWNA+IV+E + GLG Y+A Sbjct: 359 AYQIGGAAYFLHILVPASLPYLITGMLTTWGGAWNAAIVAEPLA------SVHGLGRYMA 412 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++ + G P ++ V+ M V+A+N+F+W LY + Sbjct: 413 DAADAGDMPRLLASVITMTALVVAVNKFVWKRLYEEAAK 451 Score = 93.1 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 100/247 (40%), Gaps = 18/247 (7%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84 V+ + + I G P + + + + LR+++ + IS Sbjct: 225 VVVALTALFITAVGYYVAKAPPSLPQLGEFLRGAAESAEALPPSLLRVVAVLAISGAAGL 284 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 K ++ ++ SIP + G V+ EL AI + Sbjct: 285 AALYSVVKKPGWETAILLGTSLLSSIPAVFLYPLL---------GAVVKGELLAILLLMP 335 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + + ++P+DL +R++++ G F ++ VP S+P L+ M+ + G W Sbjct: 336 GALIYSVLNTIAAWRDVPQDL---ARAYQIGGAAYFLHILVPASLPYLITGMLTTWGGAW 392 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 + +E + + G+G Y+A A D+ +L +++TM ++ ++ +++ + Sbjct: 393 NAAIVAEPLA------SVHGLGRYMADAADAGDMPRLLASVITMTALVVAVNKFVWKRLY 446 Query: 265 VWSNKFR 271 + K+R Sbjct: 447 EEAAKWR 453 >gi|218884510|ref|YP_002428892.1| binding-protein-dependent transport systems inner membrane component [Desulfurococcus kamchatkensis 1221n] gi|218766126|gb|ACL11525.1| binding-protein-dependent transport systems inner membrane component [Desulfurococcus kamchatkensis 1221n] Length = 497 Score = 214 bits (546), Expect = 3e-53, Method: Composition-based stats. Identities = 130/527 (24%), Positives = 233/527 (44%), Gaps = 37/527 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + RM +A ++SLL A++R + VL+PILD++QSIPILGF Sbjct: 4 ELVVATLLSLYRMFAAYLLSLLIALFTGIAMARNRVVEAVLLPILDVLQSIPILGFFPVV 63 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F+ G +G EL+AI I TS VWNM F +Y S+ ++ + ++ +R+ K Sbjct: 64 LSAFVYGL-GPGLGGELSAIVLISTSLVWNMIFGVYASIKSLDPSFDLMASVYRIPLPLK 122 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + VP S L+ N ++S + GWFF+ ++E+I +G + L G+GS+I A D Sbjct: 123 LALVYVPASRTSLLSNSLISWASGWFFLTSAEVISMGTQTLKLVGLGSFIFDASNRGDAQ 182 Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIG 299 A M + VI +L+ P +V + T + + L R T Sbjct: 183 AFAAGMGVLFTVILATYIILWNPAVV-----KYTGLTILPGVMAVFNALERLTRLF---- 233 Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 ++R L L S+ + + + G + G+ Sbjct: 234 ---------------WRLVVKAILRAWLYSRRLVLPSSTALVLVALLGPQIRPTGFSTGL 278 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 + S+ +N F ++ + + + +++ + +A R + Sbjct: 279 LYGSLVKYLNMFLTNVWPTLLRVYVVLLVSLLISLPLA--------YLSHRRRAVGLAAC 330 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV-IAGASAFPND 478 +LL++ PA +++PL++ H P + + + G WY+ FNV I G D Sbjct: 331 TAGELLSSIPAMIWWPLLLPVA---HAAPWFVMFFVYLQGALWYVYFNVMIFGLQYVKRD 387 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 E+ + I G+ +++ + +P + P +TG ++A GGAWNASI +E ++G + G Sbjct: 388 IIELTDVYKIRGFLYFKSVFIPAMLPSILTGLLSASGGAWNASIAAEYIAFGDFEVDIGG 447 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 +G+ I + +G V+ L M ++ LN+ +W L+ Sbjct: 448 VGSLIDKLAAQGDSLGVLFVALYMSLVIVLLNKLIWGRLFARLGARF 494 Score = 93.5 bits (231), Expect = 1e-16, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 88/204 (43%), Gaps = 3/204 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V ++ ++++R+ +++ +I + GI + + + + P +L + P FFP Sbjct: 2 VPELVVATLLSLYRMFAAYLLSLLIALFTGIAMARNRVVEAVLLPILDVLQSIPILGFFP 61 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGT---QWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 +V+S Y ++ + W ++F V A + F +AS + I Sbjct: 62 VVLSAFVYGLGPGLGGELSAIVLISTSLVWNMIFGVYASIKSLDPSFDLMASVYRIPLPL 121 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + +P ++ ++ + W +EV S G L+ GLG++I +++ +G Sbjct: 122 KLALVYVPASRTSLLSNSLISWASGWFFLTSAEVISMGTQTLKLVGLGSFIFDASNRGDA 181 Query: 553 PEVVLGVLIMCCFVLALNRFLWHP 576 G+ ++ +LA LW+P Sbjct: 182 QAFAAGMGVLFTVILATYIILWNP 205 >gi|171184672|ref|YP_001793591.1| binding-protein-dependent transport systems inner membrane component [Thermoproteus neutrophilus V24Sta] gi|170933884|gb|ACB39145.1| binding-protein-dependent transport systems inner membrane component [Thermoproteus neutrophilus V24Sta] Length = 458 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 126/516 (24%), Positives = 221/516 (42%), Gaps = 75/516 (14%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T RM A+V ++ + A +SRR+ V++P+LD+MQS+P+LGF + F+ Sbjct: 15 TFGRMALALVFTVAVAYALAYAMWRSRRVEAVMLPVLDVMQSVPVLGFFPIALYIFVYFV 74 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P IGAELAA F IFTS WNM F +YQ+ +PR+L ++SR + L+ + ++ +P Sbjct: 75 PW--IGAELAAQFLIFTSMAWNMIFGIYQAFKTLPRELLDMSRVY-LNERLELAHVFLPA 131 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++ + +N +S + +FF+ ASE+I +G T + L GIGS++ A + D A + Sbjct: 132 ALRSVYYNAAVSWANAFFFITASEVITLG-TEVKLFGIGSFVVDAFERGDTTAAYVGIAV 190 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 + LL+R ++ + S + + F +I + S F+ Sbjct: 191 GVAGNVALYFLLWRRLMR-----------DVPQPPSALAEI-----FTPWIKHGSHAVFA 234 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + + L+ + S G++ + ++ + Sbjct: 235 SAALLLAAALYYAMRSPPPPATGLLEGFAQSLASVAPTSARVLAALGISAAVGIAAVALV 294 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V P + I L++ Sbjct: 295 VRK-----------------------------------------PEAETPILLALSALSS 313 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 PA +PL+ S L++ G+ Y N +A P DF + + Sbjct: 314 VPAVFLYPLIGSVA-----RGEALAVALLLPGSIVYTALNAVAAWRDVPRDFVKA---YG 365 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + G ++ +++LP PY VTG +TA GGAWNA+IV+E + GLGAY+ ++ Sbjct: 366 VRGAVYYVHVLLPAALPYLVTGLLTAWGGAWNATIVAEPLA------DVAGLGAYMTQAA 419 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + G+ P + V +M V+ +N+ +W LY ++ Sbjct: 420 QAGNTPALAASVAVMSAVVIVVNKLVWRRLYNLASQ 455 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 87/203 (42%), Gaps = 18/203 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T+ R+L+A+ IS L + ++ L + S+P + Sbjct: 272 TSARVLAALGISAAVGIAAVALVVRKPEAETPILLALSALSSVPAVFLYPLI-------- 323 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V E A+ + + + + ++PRD +++ + G + ++ +P Sbjct: 324 -GSVARGEALAVALLLPGSIVYTALNAVAAWRDVPRDFV---KAYGVRGAVYYVHVLLPA 379 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P LV ++ + G W + +E + + G+G+Y+ A + + A+ ++ Sbjct: 380 ALPYLVTGLLTAWGGAWNATIVAEPLA------DVAGLGAYMTQAAQAGNTPALAASVAV 433 Query: 248 MLGVIFLYDQLLFRPMIVWSNKF 270 M V+ + ++L++R + ++++ Sbjct: 434 MSAVVIVVNKLVWRRLYNLASQW 456 >gi|119872760|ref|YP_930767.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum islandicum DSM 4184] gi|119674168|gb|ABL88424.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum islandicum DSM 4184] Length = 459 Score = 211 bits (538), Expect = 3e-52, Method: Composition-based stats. Identities = 131/519 (25%), Positives = 234/519 (45%), Gaps = 73/519 (14%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T RM A++ ++ + A KSRR+ VL+P+LD++QS+PILGF + F+ Sbjct: 11 LLATFGRMALALLSTVAIAYALAYAMYKSRRVEAVLLPLLDVLQSVPILGFFPIALYVFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + P IGAELAA F IFTS WN+ F +YQS +PR+L E+S+ + L+ ++ Sbjct: 71 FIMP--QIGAELAAQFLIFTSMAWNIIFGIYQSFKTLPRELIEMSQVY-LTERLALAHVF 127 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++ + +N +S S +FF+ ASE+I +G T + L GIGS++ A ++ D A Sbjct: 128 LPVALRSVYYNAAVSWSNAFFFITASEVITLG-TEVKLFGIGSFVVDAFEKGDTTAAYVG 186 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + L+R +I + + ++++ Y + Sbjct: 187 IAIGTAGNIALYLFLWRRLIR-------------EMPQPPYVLSKILSVWMKYGIYVIFT 233 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 LS ++ + W+ + Sbjct: 234 ATMLLSAVS---------------------------------IYYILRNFTPASQQWELL 260 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 Y+VN + +T+ + L+ +A ++ P + + + + Sbjct: 261 SYLVNSLIDVLPTLARVVMTLTISALAGLLSVALVV---------KNPQLETTVFIALSI 311 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L++ PA +PL+ S V L+ L++ G+ Y + N +A P D A Sbjct: 312 LSSIPAVFLYPLIGSVVRGEALS-----VALLLPGSIVYTVLNAVAAWRDVPKDL---AR 363 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 ++ I G ++ +I++P PY +TG +TA GGAWNA+IV+E + GLGAY+A Sbjct: 364 AYGIGGAVYFIHILIPATLPYLITGLLTAWGGAWNATIVAESLA------NVNGLGAYMA 417 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + + G+ P +++ V++M V+ +N+ +W LY + Sbjct: 418 QVAQLGNIPALIISVIVMSGVVITVNKLVWKRLYNLVAQ 456 >gi|88062879|gb|ABD39044.1| binding protein dependent transporter [Mesorhizobium loti] Length = 194 Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats. Identities = 124/173 (71%), Positives = 154/173 (89%) Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 R +V++P+LDI+QS+PILGFLTFTVV+FMNL+PG+V+GAELA++FAIFTSQ WNMTFS+ Sbjct: 16 RAELVMIPLLDILQSVPILGFLTFTVVFFMNLFPGQVLGAELASVFAIFTSQAWNMTFSL 75 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 YQS+ N+P+DLEE ++SF LSGWQ+FW L VPF+MPGL+WN MMSMSGGWFFVVASE I Sbjct: 76 YQSIRNVPKDLEEATQSFHLSGWQRFWRLDVPFAMPGLIWNAMMSMSGGWFFVVASEAIT 135 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 VG+T + LPGIGSY+A+AI++QDL AILYAML ML VI YDQLLFRP++ W+ Sbjct: 136 VGNTTVTLPGIGSYVAMAIQQQDLPAILYAMLAMLLVIIAYDQLLFRPIVAWA 188 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 4/175 (2%) Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNV 468 + P +L + P F V L L + W + F++ Sbjct: 16 RAELVMIPLLDILQSVPILGFLTFTVVFFMNLFPGQVLGAELASVFAIFTSQAWNMTFSL 75 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 P D +E SFH++GW+ + + +P P + A+ + G W + SE + Sbjct: 76 YQSIRNVPKDLEEATQSFHLSGWQRFWRLDVPFAMPGLIWNAMMSMSGGWFFVVASEAIT 135 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G+ + G+G+Y+A + ++ P ++ +L M ++A ++ L+ P+ + Sbjct: 136 VGNTTVTLPGIGSYVAMAIQQQDLPAILYAMLAMLLVIIAYDQLLFRPIVAWAAE 190 >gi|320101553|ref|YP_004177145.1| binding-protein-dependent transport systems inner membrane component [Desulfurococcus mucosus DSM 2162] gi|319753905|gb|ADV65663.1| binding-protein-dependent transport systems inner membrane component [Desulfurococcus mucosus DSM 2162] Length = 497 Score = 205 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 118/517 (22%), Positives = 223/517 (43%), Gaps = 44/517 (8%) Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 RM++A +S L A+ R + VL+P+LDI+QSIP+LGF + L P Sbjct: 16 GRMIAAYTVSTLLAISIGVAMARRRLVEEVLLPLLDILQSIPVLGFFPVVFTLLLML-PA 74 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 + + E AA+F + T +WNM F +Y ++ ++ D+ ++ + L + + Y+ VP + Sbjct: 75 RQVALEAAAVFLLTTGLLWNMIFGVYSAVKSLDPDILLMADVYGLKAFSRLAYIYVPSAR 134 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 L N ++S +GGWFF+ + E+I G L G+GS I E D A+L + Sbjct: 135 AALAANSIISWAGGWFFLTSVEVIASGPQEYRLLGLGSLIMYLYNEGDTWGFYTAILLLF 194 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 +I L+F P + T R + +S F + Sbjct: 195 LMIVSSYLLVFNPAV--------------------------NTVTRRLMLPASGIIFPYI 228 Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + L + + + + + + ++ Sbjct: 229 ARLASATWGLLLSLGMRLEARRVATRRWMHRGPAAAGVAVALPTVLLLSHGSLANPLFIS 288 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 F + I++ RV + +++ + + + I ++L + P Sbjct: 289 SF--------LSNFLISLARVSAITLLSLVASVALAYL-ALTRQWGVGIAFIGEVLGSIP 339 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIF--GTQWYILFNVI-AGASAFPNDFKEVASSF 486 A +++PL+ +P WL L++F G+ WY FN++ G + E+A + Sbjct: 340 AIIWWPLLSPLA-----SPLPWLVSLVVFLQGSFWYEFFNIMLFGVPEVREELMELARVY 394 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + G+ ++RYI+LP + P +GA++A GGAWN++IV+E S G + + G+G+ +A Sbjct: 395 GVKGFNYFRYILLPSLLPSIASGALSAWGGAWNSTIVAEYFSSGILTVDLGGVGSTLARY 454 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G+ L +L+ ++ L++ LW ++ + Sbjct: 455 VYSGNLEAASLTILLWAVMIVVLDKILWSRIFKLVEK 491 Score = 84.2 bits (207), Expect = 6e-14, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 87/216 (40%), Gaps = 3/216 (1%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 D+ ++ ++ R++ +++++ I +G+ + R + + P +L + P FF Sbjct: 3 DIALLLLASLASLGRMIAAYTVSTLLAISIGVAMARRRLVEEVLLPLLDILQSIPVLGFF 62 Query: 435 PLV---VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+V + + + L+ G W ++F V + + D +A + + + Sbjct: 63 PVVFTLLLMLPARQVALEAAAVFLLTTGLLWNMIFGVYSAVKSLDPDILLMADVYGLKAF 122 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 YI +P +I + G W EV + G R GLG+ I +G Sbjct: 123 SRLAYIYVPSARAALAANSIISWAGGWFFLTSVEVIASGPQEYRLLGLGSLIMYLYNEGD 182 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +L++ +++ +++P TR L L Sbjct: 183 TWGFYTAILLLFLMIVSSYLLVFNPAVNTVTRRLML 218 >gi|145590546|ref|YP_001152548.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum arsenaticum DSM 13514] gi|145282314|gb|ABP49896.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum arsenaticum DSM 13514] Length = 468 Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats. Identities = 128/519 (24%), Positives = 224/519 (43%), Gaps = 73/519 (14%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T RM A+++++ + +SRR+ ++P+LD++QS+PILGF + +F+ Sbjct: 21 LLATFGRMAVALLLTVAVAYAIGYAMFRSRRVETFMLPLLDVLQSVPILGFFPLALYFFI 80 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 L P GAELAAIF IFTS WN+ FS+YQS +PR+L ++SR + L+ ++ Sbjct: 81 ALLPAA--GAELAAIFLIFTSMAWNIIFSVYQSFKTLPRELLDMSRVY-LNERLALAHVF 137 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++ G+ +N+ +S + +FF+ ASE+I +G T I L GIGS + E D+ + L Sbjct: 138 IPAALRGVYYNIPISWANAFFFITASEVITLG-TEIKLFGIGSLVVKWFDEGDVSSALVG 196 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + + + L+R ++ +L++ GY Sbjct: 197 IAVGIAANVVLYLTLWRRLM-------------SQVPQPPDKLAEAAGPWLKYGGYFLAA 243 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 F LG + + + + + R+ + +A +I Sbjct: 244 F----------AIILLGFVLYTALGSTNAVLAISRLPGSFVEALAAAPFTLVRVLATLAI 293 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 +V T V+ L + +G+ + Sbjct: 294 SALVALLTLHAVVRAPRLEA----------------GVLLGVLL---------------- 321 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 +++ PA +PL+ + V L+ L++ G Y + N +A P D + Sbjct: 322 ISSVPAVFLYPLLGALVRGEALSVT-----LLLPGAVVYTVLNAVAAWRDVPQDLVKA-- 374 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + I G + +++P PY +TG +TA GGAWNASIV+E + GLG Sbjct: 375 -YQIRGRLYLTQVLIPASMPYLITGLLTAWGGAWNASIVAEPLA------NVHGLGGLTT 427 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++ ++G +V V M V+A+NR +W LY + Sbjct: 428 QAADRGDISLLVATVATMTLIVVAVNRVVWRRLYEEAAK 466 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 4/205 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V+ + T R+ V +++ + +G + + + + P +L + P FFP Sbjct: 14 VILSLLALLATFGRMAVALLLTVAVAYAIGYAMFRSRRVETFMLPLLDVLQSVPILGFFP 73 Query: 436 LVVSCVSYY--HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 L + L L+ W I+F+V P + +++ + + Sbjct: 74 LALYFFIALLPAAGAELAAIFLIFTSMAWNIIFSVYQSFKTLPRELLDMSRVY-LNERLA 132 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 ++ +P + A+ SEV + G ++ G+G+ + + ++G Sbjct: 133 LAHVFIPAALRGVYYNIPISWANAFFFITASEVITLG-TEIKLFGIGSLVVKWFDEGDVS 191 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLY 578 ++G+ + + L LW L Sbjct: 192 SALVGIAVGIAANVVLYLTLWRRLM 216 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 101/246 (41%), Gaps = 21/246 (8%) Query: 29 IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR---TTLRMLSAMVISLLFTFV 85 + I+L G T ++ I+ S + + T +R+L+ + IS L + Sbjct: 241 LAAFAIILLGFVLYTALGSTNAVLAISRLPGSFVEALAAAPFTLVRVLATLAISALVALL 300 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 ++ RL ++ + ++ S+P + G ++ E ++ + Sbjct: 301 TLHAVVRAPRLEAGVLLGVLLISSVPAVFLYPLL---------GALVRGEALSVTLLLPG 351 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 V + + ++P+DL +++++ G + +P SMP L+ ++ + G W Sbjct: 352 AVVYTVLNAVAAWRDVPQDLV---KAYQIRGRLYLTQVLIPASMPYLITGLLTAWGGAWN 408 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 + +E + + G+G A D+ ++ + TM ++ +++++R + Sbjct: 409 ASIVAEPLA------NVHGLGGLTTQAADRGDISLLVATVATMTLIVVAVNRVVWRRLYE 462 Query: 266 WSNKFR 271 + K+R Sbjct: 463 EAAKWR 468 >gi|126459292|ref|YP_001055570.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum calidifontis JCM 11548] gi|126249013|gb|ABO08104.1| binding-protein-dependent transport systems inner membrane component [Pyrobaculum calidifontis JCM 11548] Length = 453 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 125/506 (24%), Positives = 216/506 (42%), Gaps = 78/506 (15%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T RM +V+S+ + AKSRR VL+P LD+MQS+PILGF + F+ Sbjct: 11 LLATYARMALGLVVSIAVAYALGYAMAKSRRAEAVLLPFLDVMQSVPILGFFPVALFVFV 70 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + +P IGAELAA+F IFTS WN+ F +YQ+L +PR+ E++R + L+ + ++ Sbjct: 71 SFFP--RIGAELAAVFLIFTSMAWNIIFGVYQALKTLPREYLEMARLY-LNERLEIAHVV 127 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +PF++ L +N +S + +FF+ ASE+I +G T I L GIGS + A ++ DL Sbjct: 128 IPFTLRSLYYNAAISWANAFFFITASEVITLG-TEIHLFGIGSLVVKAFEDGDLATAYVG 186 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 + L L++R ++ T + W Sbjct: 187 IAVALLGNVALYALVWRRVL---------------------------TRLPQLPFVDLWR 219 Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 + V I + + A S Sbjct: 220 VWMKYGAYV----------------------------VYAAILLLAYLFAEYVATAPLSA 251 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G L + L + + +I+I++ + + + +P + P + Sbjct: 252 GGFAAAVAESTYLSLFSLARV-----LAVILISAAVGLATTALVVEKPSREVAVFPAVAV 306 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L++ P +PL+ + + + + +L++ Y + N +A P D A Sbjct: 307 LSSIPPVFLYPLLAAFI-----KGEILVLVLLLPAAALYTVINTLAAWRDVPRDL---AK 358 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 ++ I+GW + +I++P PY TG +T GGAWN +V+E + +GLG+Y+A Sbjct: 359 AYQISGWLYLWHILIPAALPYIATGLLTTWGGAWNGLVVAEPFA------DVSGLGSYMA 412 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 + +G + V +M V+A N Sbjct: 413 HAAGRGDVNALFASVAVMTAIVVATN 438 Score = 87.3 bits (215), Expect = 7e-15, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 95/238 (39%), Gaps = 19/238 (7%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 ++ +V I +L + E V + V + + R+L+ ++I Sbjct: 220 VWMKYGAYVVYAAILLLAYLFAEY-VATAPLSAGGFAAAVAESTYLSLFSLARVLAVILI 278 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 S L + + + P + ++ SIP + + I E+ Sbjct: 279 SAAVGLATTALVVEKPSREVAVFPAVAVLSSIPPVFLYPLLAAF---------IKGEILV 329 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 + + + + + ++PRDL ++++++SGW W++ +P ++P + ++ Sbjct: 330 LVLLLPAAALYTVINTLAAWRDVPRDL---AKAYQISGWLYLWHILIPAALPYIATGLLT 386 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + G W +V +E + G+GSY+A A D+ A+ ++ M ++ + Sbjct: 387 TWGGAWNGLVVAEPFA------DVSGLGSYMAHAAGRGDVNALFASVAVMTAIVVATN 438 Score = 83.4 bits (205), Expect = 1e-13, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 76/199 (38%), Gaps = 4/199 (2%) Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 T R+ + ++++ + +G + + + PF ++ + P FFP+ + Sbjct: 8 FLALLATYARMALGLVVSIAVAYALGYAMAKSRRAEAVLLPFLDVMQSVPILGFFPVALF 67 Query: 440 CVSYY--HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + + L L+ W I+F V P ++ E+A + + ++ Sbjct: 68 VFVSFFPRIGAELAAVFLIFTSMAWNIIFGVYQALKTLPREYLEMARLY-LNERLEIAHV 126 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ++P A + A+ SEV + G + G+G+ + ++ E G + Sbjct: 127 VIPFTLRSLYYNAAISWANAFFFITASEVITLG-TEIHLFGIGSLVVKAFEDGDLATAYV 185 Query: 558 GVLIMCCFVLALNRFLWHP 576 G+ + +AL +W Sbjct: 186 GIAVALLGNVALYALVWRR 204 >gi|58040918|ref|YP_192882.1| transport protein [Gluconobacter oxydans 621H] gi|58003332|gb|AAW62226.1| Transport protein [Gluconobacter oxydans 621H] Length = 547 Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats. Identities = 118/566 (20%), Positives = 230/566 (40%), Gaps = 42/566 (7%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + ++ L + +V + + P L A T L ++ +++I + Sbjct: 23 IELSILFCATAFALLVLPRASVAPVLSAMPPAA--PLPLWDMAGLTVLHVILSLLIVVAA 80 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + + + A + R L+P L + +++P LG + F L + Sbjct: 81 SLLLSGAACQWPRFRAFLIPALSVARAVPGLGLIGILAALF---------PPTLTIMLVA 131 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 +S +W + ++ + +P L+EV+ R++GWQ+FW L +P ++P + M +M Sbjct: 132 ASSMIWRIVTAVLDAEDTLPPALDEVATGLRMTGWQRFWRLQMPVAVPLTTFRAMQTMPA 191 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 W ++++E +++ + G G+ A+ + L I+ +L +I + DQ L RP Sbjct: 192 FWVRLLSAEGLMMLMSHQATGGCGAAALQAMLDHHPLRIVEVSGIILLLILVIDQALMRP 251 Query: 263 MIVWSNKFRLERT-TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLG 321 M+ W+ ++R E SW+L ++R+T + ++ + + N LG Sbjct: 252 MVGWAQRYRPEGPFEERARPQSWLLTIWRRTKLMLWLSGGVSDALVWIGNW------RLG 305 Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381 R PE R L VV + A G + V + Sbjct: 306 RPRSILPERH-------RTVRELPEALLPVVSLFLLVYAVYHAGLL------GQVPADLA 352 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 +T+ V +++ ++W+P+G+ I + A A FP V+ Sbjct: 353 ESVLTLSHVCGTLLLCVLVWVPLGLVISEHGSSLRNVCRM-----AVMACGLFPAVLLYP 407 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 L + + LL G W + V+ A A P+ ++VA+ + G WR ++LP Sbjct: 408 LCRELGLDSPVILL-FLGAHWLVGIVVLDAAKAIPSGLRQVAAGLRLRGVLLWRRLLLPA 466 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 I P G +TA WNA +V+E +GLGA + G+ +L +++ Sbjct: 467 IAPELCGGLLTAVVPVWNAVMVAEAFVPSD-----SGLGAALLSEALSGAVAAQILALML 521 Query: 562 MCCFVLALNRFLWHPLYLYGTRCLRL 587 + + L+R + PL + + + Sbjct: 522 LTLLSMLLDRLVLQPLAVNAAQKYTI 547 Score = 63.4 bits (153), Expect = 1e-07, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 5/249 (2%) Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394 QR+S + FC + + S+ +++ L + + +T+ V++ + Sbjct: 15 RWRQRMSGIELSILFCATAFALLVLPRASVAPVLSAMPPAAPLPLWDMAGLTVLHVILSL 74 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I + + P + + P + A P ++ + P L + L Sbjct: 75 LIVVAASLLLSGAACQWPRFRAFLIPALSVARAVPGLGLIGILAALF-----PPTLTIML 129 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + W I+ V+ P EVA+ +TGW+ + + +P P A+ Sbjct: 130 VAASSMIWRIVTAVLDAEDTLPPALDEVATGLRMTGWQRFWRLQMPVAVPLTTFRAMQTM 189 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW 574 W + +E H T G GA ++ +V I+ +L +++ L Sbjct: 190 PAFWVRLLSAEGLMMLMSHQATGGCGAAALQAMLDHHPLRIVEVSGIILLLILVIDQALM 249 Query: 575 HPLYLYGTR 583 P+ + R Sbjct: 250 RPMVGWAQR 258 >gi|325519249|gb|EGC98700.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 187 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 105/170 (61%), Positives = 133/170 (78%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + + G ET P + I+LD +LP+YA RTTLRML Sbjct: 18 RVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDPSNLPEYALRTTLRML 77 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+PG+V+G Sbjct: 78 AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPGRVLG 137 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 AELAAIFAIFTSQ WNMTFS YQSL +PRDL+EVSR F L+ WQ+FW L Sbjct: 138 AELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQRFWKL 187 Score = 56.9 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 10/185 (5%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW------QSIGYIVNHFTYQDV 376 + F P + + + D F ++ + IG + D Sbjct: 3 VGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGTLQTQKISLDP 62 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + T R++ ++ + + G + P +L + P F Sbjct: 63 SNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISF 122 Query: 437 VVSCVSYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ L L + W + F+ P D EV+ FH+T W+ Sbjct: 123 TVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSWQ 182 Query: 493 WWRYI 497 + + Sbjct: 183 RFWKL 187 >gi|224456410|ref|ZP_03664883.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. tularensis MA00-2987] Length = 245 Score = 190 bits (484), Expect = 4e-46, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 4/240 (1%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 W+ V+ + + F D+ Y+I L T RV + ++I+ I P+GI Sbjct: 8 AWYIVIISACVWAGNALWHF----FPDGDMSYLIPLMIETTVRVTIAMMISVAICTPLGI 63 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 WIG + IQP Q+ AA P +FFP+V + + N+W L++ GT +Y+LF Sbjct: 64 WIGMSSKRTKAIQPIIQIGAAIPQPIFFPIVAVLILAGDGSLNVWCIPLIMTGTSYYVLF 123 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 NVI+G S P + E+ SFH+ G +WW +P +FPY V G I+A GGAWN++I +E+ Sbjct: 124 NVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAEL 183 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 WG ++ G+GA ++ +T + L V+ +C V F+W PLY + Sbjct: 184 VIWGSNTIKVDGIGALVSTTTANNQLHDAALAVVALCSLVALCIIFIWKPLYKLAETKYK 243 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 4/212 (1%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D+ L TT+R+ AM+IS+ S + + PI+ I +IP F Sbjct: 32 DMSYLIPLMIETTVRVTIAMMISVAICTPLGIWIGMSSKRTKAIQPIIQIGAAIPQPIFF 91 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 V + + I I T + + F++ N+P ++ E+++SF L G Sbjct: 92 PIVAVLILAGDGS----LNVWCIPLIMTGTSYYVLFNVISGFSNLPTEIIEMTKSFHLKG 147 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + ++ +P P +V ++ + G W +A+E+++ G I + GIG+ ++ Sbjct: 148 LKWWFKFAIPAVFPYIVCGIISAAGGAWNSAIAAELVIWGSNTIKVDGIGALVSTTTANN 207 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSN 268 L A++ + ++ L +++P+ + Sbjct: 208 QLHDAALAVVALCSLVALCIIFIWKPLYKLAE 239 >gi|227328482|ref|ZP_03832506.1| putative sulfate ester transporter, permease component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 568 Score = 190 bits (483), Expect = 6e-46, Method: Composition-based stats. Identities = 93/552 (16%), Positives = 180/552 (32%), Gaps = 77/552 (13%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 LA + + I + DIV + L + L + R+ S ++ +L Sbjct: 72 LALLALWYISTHYGWMPAQILPAPDIVAKTAVELWHNDLLPQLFISLQRLASGLLAGVLA 131 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + L SRR +L P + + IP LG++ +V F K+ I Sbjct: 132 GTLLGALMGTSRRAEHLLHPTVYALAQIPTLGWIPLFMVLFGIDDGLKLA--------VI 183 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + MT + N P L+EV+R+ RL Q+ L +P ++P + + +++S Sbjct: 184 IKAVIIPMTLHTQTGVRNAPHALQEVARTLRLPWHQRLIKLTLPAALPTWLTGLRLALSQ 243 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259 W ++ E++ GIG + + L + + + + L Sbjct: 244 AWVSLIVVELLASSQ------GIGYLLVWGRQLFQLDIVFVCIAIIGLAGLTMEWAINQL 297 Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319 R ++ W + PLS R Sbjct: 298 ERRLVFWPH--------------------------------------PPLSRLTAAPSRR 319 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 L + F L +++ W + W + V + + + Sbjct: 320 LSALVLPFLLLLLWQQASRFG-------WIDPLLLPPPADVWHMLLQGVRDGSLTEAMQ- 371 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 ++ R + + + G+ +G + P L + PL+ + Sbjct: 372 -----ASLTRALAGAACGIVAGLVCGVLLGLNATSDALFTPTVATLRQIALFAWLPLLTA 426 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 V N + + + +L G +EVA + R +IL Sbjct: 427 WVG----NDETGKITFVALASFFPMLVASHRGIRQRSQALQEVAQVLQLRLSTRLRVLIL 482 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 PG P TG + AW +I +E TG+G+ + + + P ++ G+ Sbjct: 483 PGAAPAIFTGLRLSLIYAWLGTIGAEYFMSSG-----TGIGSLMINAQQLLDMPVIISGM 537 Query: 560 LIMCCFVLALNR 571 L++ L+R Sbjct: 538 LLIGLTGAVLDR 549 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 89/228 (39%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P D+ ++ + SL + + R L+ ++ V L + + Sbjct: 347 LPPPADVWHMLLQGVRDGSLTEAMQASLTRALAGAACGIVAGLVCGVLLGLNATSDALFT 406 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + ++ I + +L + N GK+ LA+ F M + ++ + Sbjct: 407 PTVATLRQIALFAWLPLLTAWVGNDETGKITFVALASFF--------PMLVASHRGIRQR 458 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L+EV++ +L + L +P + P + + +S+ W + +E + T Sbjct: 459 SQALQEVAQVLQLRLSTRLRVLILPGAAPAIFTGLRLSLIYAWLGTIGAEYFMSSGT--- 515 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266 GIGS + A + D+ I+ ML + + D++ L + M W Sbjct: 516 --GIGSLMINAQQLLDMPVIISGMLLIGLTGAVLDRVGLGLEQRMTRW 561 Score = 96.9 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 83/263 (31%), Gaps = 16/263 (6%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L + ++ P + V ++ + ++ W + Sbjct: 39 SILLKKTAIVWPAPPIARVYSLVVSIVVPLIVPLALLALWYISTHYGWMPAQILPAPDIV 98 Query: 374 QDVLYVIW------LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +W I++ R+ ++ + +G +G + P LA Sbjct: 99 AKTAVELWHNDLLPQLFISLQRLASGLLAGVLAGTLLGALMGTSRRAEHLLHPTVYALAQ 158 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P + PL + + ++I + + G P+ +EVA + Sbjct: 159 IPTLGWIPLFMVLFGI----DDGLKLAVIIKAVIIPMTLHTQTGVRNAPHALQEVARTLR 214 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + + + LP P ++TG A AW + IV E+ + + G+G + Sbjct: 215 LPWHQRLIKLTLPAALPTWLTGLRLALSQAWVSLIVVELLA------SSQGIGYLLVWGR 268 Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570 + V + + I+ L + Sbjct: 269 QLFQLDIVFVCIAIIGLAGLTME 291 >gi|227115048|ref|ZP_03828704.1| putative sulfate ester transporter, permease component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 569 Score = 189 bits (481), Expect = 1e-45, Method: Composition-based stats. Identities = 90/549 (16%), Positives = 180/549 (32%), Gaps = 71/549 (12%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 LA + + I + D+V + L + L + R+ S ++ +L Sbjct: 73 LALLALWYISTHYGWMPAQILPAPDVVANTAVELWHNDLLPQLFISLQRLASGLLAGVLA 132 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + L SRR +L P + + IP LG++ +V F K+ I Sbjct: 133 GTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFMVLFGIDDGLKLA--------VI 184 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +T + N+P L+EV+R+ RL Q+ L +P ++P + + +++S Sbjct: 185 IKAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLIKLTLPAALPTWLTGLRLALSQ 244 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 W ++ E++ GIG + + L + + + Sbjct: 245 AWVSLIVVELLASSQ------GIGYLLVWGRQLFQLDIVFVCIAVIGLAGLAM------- 291 Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGV 322 W+ R + PLS R L Sbjct: 292 --EWA--------------------------INRLERRLVFWPHPPLSRLTTAPSRRLSA 323 Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 + F L +++ W + W + + + + + Sbjct: 324 LVLPFLLLLLWQQASRFG-------WIDPLLLPPPADVWHMLLQGIRDGSLTEAMQ---- 372 Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 ++ R + + I + G+ +G + P L + PL+ + V Sbjct: 373 --ASLTRALAGAVCGIIAGLVCGVLLGLNATSDALFTPTVATLRQIALFAWLPLLTAWVG 430 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 N + + + + +L G +EVA + W R +ILPG Sbjct: 431 ----NDEVGKITFVALASFFPMLVASHRGIRQRSQALQEVAQVLQLRLWTRLRVLILPGA 486 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P G + AW +I +E TG+G+ + + + P ++ G+L++ Sbjct: 487 APAIFAGLRLSLIYAWLGTIGAEYFMSSG-----TGIGSLMINAQQLLDMPLIISGMLLI 541 Query: 563 CCFVLALNR 571 L+R Sbjct: 542 GLTGAVLDR 550 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 91/228 (39%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P D+ ++ + SL + + R L+ V ++ V L + + Sbjct: 348 LPPPADVWHMLLQGIRDGSLTEAMQASLTRALAGAVCGIIAGLVCGVLLGLNATSDALFT 407 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + ++ I + +L + N GK+ LA+ F M + ++ + Sbjct: 408 PTVATLRQIALFAWLPLLTAWVGNDEVGKITFVALASFF--------PMLVASHRGIRQR 459 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L+EV++ +L W + L +P + P + + +S+ W + +E + T Sbjct: 460 SQALQEVAQVLQLRLWTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT--- 516 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266 GIGS + A + D+ I+ ML + + D++ L + M W Sbjct: 517 --GIGSLMINAQQLLDMPLIISGMLLIGLTGAVLDRVGLGLEQRMTRW 562 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 87/255 (34%), Gaps = 28/255 (10%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL---------------- 377 + ++ + +V + + +A ++ YI H+ + Sbjct: 48 VWPALPIARAYSLVMPILVVPLIVPLALLALWYISTHYGWMPAQILPAPDVVANTAVELW 107 Query: 378 --YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ I++ R+ ++ + +G +G + P LA P + P Sbjct: 108 HNDLLPQLFISLQRLASGLLAGVLAGTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIP 167 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L + + ++I + + G P+ +EVA + + + Sbjct: 168 LFMVLFGI----DDGLKLAVIIKAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLI 223 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + LP P ++TG A AW + IV E+ + + G+G + + V Sbjct: 224 KLTLPAALPTWLTGLRLALSQAWVSLIVVELLA------SSQGIGYLLVWGRQLFQLDIV 277 Query: 556 VLGVLIMCCFVLALN 570 + + ++ LA+ Sbjct: 278 FVCIAVIGLAGLAME 292 >gi|325527631|gb|EGD04934.1| ABC anion transporter, fused inner membrane subunits [Burkholderia sp. TJI49] Length = 186 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 103/170 (60%), Positives = 132/170 (77%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I ++ + + G +T P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIATLQTQKISLDPSNLPEYALRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL FT +Y TLAAKSRR GMVL+PILDI+QS+P+LGF++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 AELAAIFAIFTSQ WNMTFS YQSL +P DL EVSR F L+GWQ+FW L Sbjct: 137 AELAAIFAIFTSQAWNMTFSFYQSLRTVPSDLNEVSRGFHLTGWQRFWKL 186 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 54/180 (30%), Gaps = 10/180 (5%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ------DVLYVIW 381 P + + + D F ++ + + T Q D + Sbjct: 7 PNRTANASAWRVLPNRWDAVAFPLIICLLAMAIVGFHQTMAPIATLQTQKISLDPSNLPE 66 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 T R++ ++ + + G + P +L + P F V+ Sbjct: 67 YALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFF 126 Query: 442 SYYH----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 L L + W + F+ P+D EV+ FH+TGW+ + + Sbjct: 127 LALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPSDLNEVSRGFHLTGWQRFWKL 186 >gi|116334712|ref|YP_796239.1| ABC-type anion transport system, duplicated permease component [Lactobacillus brevis ATCC 367] gi|116100059|gb|ABJ65208.1| ABC-type anion transport system, duplicated permease component [Lactobacillus brevis ATCC 367] Length = 282 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 136/251 (54%), Gaps = 4/251 (1%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L + A RT R+ M+ SL F+ V+ +AA+ + ++P++++++S+P+ GF Sbjct: 23 FTFAQLVEAALRTMTRLFIGMLWSLAFSLVFGVMAARYKTARYFILPLVNLLESVPLRGF 82 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 LTFT +FM +P V+G E AIF +FT+Q WN+ +YQSL P++L V+ F + Sbjct: 83 LTFTTAWFMGWFPNNVLGVEAVAIFGVFTAQAWNIMLVLYQSLRVTPKELLTVADPFGCN 142 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG---DTVIPLPGIGSYIALA 232 WQ+FW L +++PG++WNM++S S WF +VA E V + LPGIGSYI +A Sbjct: 143 SWQRFWRLEFIYAVPGILWNMVISQSAAWFALVACEQATVAFPRTETLILPGIGSYIQIA 202 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRL-ERTTGIYPADSWVLYLFRK 291 + A+ A+ +L + + LF+P+I + ++ T P S V L Sbjct: 203 LDRSKFGAVAAALGALLVCVLFTNVCLFQPLIKGTVHYKYSTGTDNQLPPQSRVYDLVSH 262 Query: 292 TNFLRFIGYSS 302 +++ Sbjct: 263 AKLPKWLHQWG 273 Score = 77.7 bits (190), Expect = 6e-12, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 77/218 (35%), Gaps = 7/218 (3%) Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 ++ Y ++ TM R+ + ++ + + G+ I P LL Sbjct: 16 VLGSKNYFTFAQLVEAALRTMTRLFIGMLWSLAFSLVFGVMAARYKTARYFILPLVNLLE 75 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ----WYILFNVIAGASAFPNDFKEV 482 + P F + + N L + + IFG W I+ + P + V Sbjct: 76 SVPLRGFLTFTTAWFMGWFPNNVLGVEAVAIFGVFTAQAWNIMLVLYQSLRVTPKELLTV 135 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG---HIHLRTTGL 539 A F W+ + + P + + + AW A + E A+ L G+ Sbjct: 136 ADPFGCNSWQRFWRLEFIYAVPGILWNMVISQSAAWFALVACEQATVAFPRTETLILPGI 195 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 G+YI + ++ F V + + VL N L+ PL Sbjct: 196 GSYIQIALDRSKFGAVAAALGALLVCVLFTNVCLFQPL 233 >gi|261821115|ref|YP_003259221.1| binding-protein-dependent transporters inner membrane component [Pectobacterium wasabiae WPP163] gi|261605128|gb|ACX87614.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium wasabiae WPP163] Length = 533 Score = 175 bits (445), Expect = 2e-41, Method: Composition-based stats. Identities = 85/532 (15%), Positives = 173/532 (32%), Gaps = 71/532 (13%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 + IV I L + L + R+ S ++ LL + L SRR + Sbjct: 54 AQILPAPHIVANTAIELWHNDLLPQLFISLQRLASGLLAGLLAGTLLGALMGASRRAEHL 113 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 L P + ++ IP LG++ +V F + + I + + +T + Sbjct: 114 LHPTVYMLAQIPTLGWIPLFMVLFGID--------DALKLAVIIKAVIIPVTLHTQTGVR 165 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 N+P L+EV+R+ RL Q+ L +P + P + + +S+S W ++ E++ Sbjct: 166 NVPPALQEVARTLRLPWHQRLIKLTLPAAFPTWLTGLRLSLSQAWVSLIVVELLASSQ-- 223 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279 GIG + + L + + + + ++ Sbjct: 224 ----GIGYLLVWGRQLFQLDIVFVCITIIGLAGLTMEWVI-------------------- 259 Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 + + PL R L + F +N+ Sbjct: 260 ---------------NQLENRLVFWPHPPLGRLTTAPSRRLSALILPFLLLLFWQQTNR- 303 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 W + W + +++ + + + ++ R + + + Sbjct: 304 ------FSWIDPLLFPPPADVWHMLLQGIHNDSLTEAMQ------ASLTRTLAGALCGIV 351 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + GI +G + P L + PL+ + V N + Sbjct: 352 AGLVCGILLGLNATSDALFTPTISTLRQIALFAWLPLLTAWVG----NDETGKITFVALA 407 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + +L G +EVA + R +ILPG P G + AW Sbjct: 408 SFFPMLVASHRGIRQRSQALQEVAQVLQLRLSTRLRVLILPGAAPAIFAGLRLSLIYAWL 467 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +I +E TG+G+ + + + P ++ G+L++ L+R Sbjct: 468 GTIGAEYFMSSG-----TGIGSLMINAQQLLDMPLIISGMLLIGLTGAVLDR 514 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 91/229 (39%), Gaps = 14/229 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P D+ ++ + SL + + R L+ + ++ V L + + P Sbjct: 313 PPPADVWHMLLQGIHNDSLTEAMQASLTRTLAGALCGIVAGLVCGILLGLNATSDALFTP 372 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 + ++ I + +L + N GK+ LA+ F M + ++ + Sbjct: 373 TISTLRQIALFAWLPLLTAWVGNDETGKITFVALASFF--------PMLVASHRGIRQRS 424 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 + L+EV++ +L + L +P + P + + +S+ W + +E + T Sbjct: 425 QALQEVAQVLQLRLSTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT---- 480 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + D+ I+ ML + + D++ + W ++R Sbjct: 481 -GIGSLMINAQQLLDMPLIISGMLLIGLTGAVLDRVGL-GLEQWMTRWR 527 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 84/263 (31%), Gaps = 16/263 (6%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + G + P + + ++ + ++ W + Sbjct: 4 SIALKKTGTVWPSLPITRVYSLVVPIIVPLVVPLALLALWYISTYYGWMPAQILPAPHIV 63 Query: 374 QDVLYVIW------LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + +W I++ R+ ++ + +G +G + P +LA Sbjct: 64 ANTAIELWHNDLLPQLFISLQRLASGLLAGLLAGTLLGALMGASRRAEHLLHPTVYMLAQ 123 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P + PL + + ++I + + G P +EVA + Sbjct: 124 IPTLGWIPLFMVLFGI----DDALKLAVIIKAVIIPVTLHTQTGVRNVPPALQEVARTLR 179 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + + + LP FP ++TG + AW + IV E+ + + G+G + Sbjct: 180 LPWHQRLIKLTLPAAFPTWLTGLRLSLSQAWVSLIVVELLA------SSQGIGYLLVWGR 233 Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570 + V + + I+ L + Sbjct: 234 QLFQLDIVFVCITIIGLAGLTME 256 >gi|116334711|ref|YP_796238.1| ABC-type anion transport system, duplicated permease component [Lactobacillus brevis ATCC 367] gi|116100058|gb|ABJ65207.1| ABC-type anion transport system, duplicated permease component [Lactobacillus brevis ATCC 367] Length = 264 Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 130/239 (54%), Gaps = 2/239 (0%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 W + IG++ + + + +IW +T RV+ ++++++I+IP+ + Sbjct: 26 LWLTLWYFSLGCAMVGLIGFLATYLKWLNWQTLIWWTLLTTGRVLAAVVLSALIFIPLAV 85 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 W+ P ++IQP+ Q++ + PA+V+ P+V + W+ L++ GTQWY F Sbjct: 86 WVASNPRRLNRIQPWGQVIGSIPADVYVPVVALLIVATGTTHQWWVIPLIMTGTQWYFFF 145 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 NVIAG A P D +EV FH+ GWRWW + P +FPY +T I A G AWNA I +E+ Sbjct: 146 NVIAGYLAIPADIQEVTQVFHLKGWRWWTRFLFPSLFPYLITAIINAAGAAWNADIAAEL 205 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 +WG GLGAYIA +T+ + P GVLI+C V F+W PLY + R Sbjct: 206 ITWGTKQFSVAGLGAYIAGNTD--NKPAEATGVLIICGLVGICVIFIWQPLYRFAERRF 262 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 6/214 (2%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L+ +L + TT R+L+A+V+S L A A + R + P ++ SIP + Sbjct: 53 LNWQTLIWWTLLTTGRVLAAVVLSALIFIPLAVWVASNPRRLNRIQPWGQVIGSIPADVY 112 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + + + + I I T W F++ IP D++EV++ F L Sbjct: 113 VPVVALLIVATGTT----HQWWVIPLIMTGTQWYFFFNVIAGYLAIPADIQEVTQVFHLK 168 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 GW+ + P P L+ ++ + W +A+E+I G + G+G+YI A Sbjct: 169 GWRWWTRFLFPSLFPYLITAIINAAGAAWNADIAAELITWGTKQFSVAGLGAYI--AGNT 226 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 + A +L + G++ + +++P+ ++ + Sbjct: 227 DNKPAEATGVLIICGLVGICVIFIWQPLYRFAER 260 >gi|253686557|ref|YP_003015747.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753135|gb|ACT11211.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 532 Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats. Identities = 85/528 (16%), Positives = 175/528 (33%), Gaps = 73/528 (13%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 L + LR+ + V +L +RRL + +P+ ++ IP L ++ Sbjct: 72 PEELVHQLPISLLRLAIGFSGGIALGLVLGSLFGLNRRLNALFMPLFTVIAQIPTLAWIP 131 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 ++ E + + S +T + P+ L E++RS RL Sbjct: 132 LLMLSLGIG--------EALKLVVLVKSVTVPVTLYTCAGIQQTPQKLHEMARSLRLPPA 183 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 YL +P +P ++ + ++ S GW ++A E++ + G+G + + + Sbjct: 184 AFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------GLGYLLVQSRQLFM 237 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297 L + +L + + F +++L + W + + DS L Sbjct: 238 LDLVFVCILIIGILGFAGERVLLKLERRW-----IHWPAPVLGRDSLGYAL--------- 283 Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 S + +PL V + ++ + S ++D W +V G Sbjct: 284 PSLSLTPWLAPLVLVVLWQVSSTYE--------WVNVAFLPAPSRVIDALWTGLVQG--- 332 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 ++ ++ R + + S I + VG +G Sbjct: 333 --------------------GLLIDLHASLLRALQGFTLGSAIGVLVGAVLGGWRIADRL 372 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 P L + PL+ + + + + ++ G + P Sbjct: 373 FNPALSALRCVALFAWLPLITAWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQLPP 428 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 EVA +T + R +ILP + P +G A AW +I +E Sbjct: 429 ALLEVAQVLRLTPVQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----PSGE 483 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 GLG + + + ++ GV+++ +R + R L Sbjct: 484 GLGGMMIRAQQLLESDRIMAGVVLIAAVAALFSRLI-----TLSERRL 526 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 90/248 (36%), Gaps = 17/248 (6%) Query: 23 LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L V++ + + + P ++D + L L + LR L + Sbjct: 295 LVLVVLWQVSSTYEWVNVAFLPAPSRVIDALWTGLVQGGLLIDLHASLLRALQGFTLGSA 354 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + + R + P L ++ + + +L +F E A I Sbjct: 355 IGVLVGAVLGGWRIADRLFNPALSALRCVALFAWLPLITAWFGLG--------ESAKIVF 406 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + Q + +P L EV++ RL+ Q L +P +P L + +++ Sbjct: 407 IAVAAFFPVMLATRQGIAQLPPALLEVAQVLRLTPVQTLRTLILPSVLPPLFSGLRLALM 466 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL-- 259 W + +E + G+G + A + + I+ ++ + V L+ +L+ Sbjct: 467 HAWTGAIGAEYFMPSGE-----GLGGMMIRAQQLLESDRIMAGVVLIAAVAALFSRLITL 521 Query: 260 -FRPMIVW 266 R + W Sbjct: 522 SERRLTRW 529 >gi|27366831|ref|NP_762358.1| nitrate ABC transporter permease [Vibrio vulnificus CMCP6] gi|37676610|ref|NP_937006.1| nitrate transporter system, permease component [Vibrio vulnificus YJ016] gi|320158715|ref|YP_004191093.1| nitrate ABC transporter permease [Vibrio vulnificus MO6-24/O] gi|27358398|gb|AAO07348.1| Nitrate ABC transporter, permease protein [Vibrio vulnificus CMCP6] gi|37201153|dbj|BAC96976.1| nitrate transporter system, permease component [Vibrio vulnificus YJ016] gi|319934027|gb|ADV88890.1| nitrate ABC transporter permease protein [Vibrio vulnificus MO6-24/O] Length = 322 Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++AS+I IP+GI +G + P QLL Sbjct: 97 VKIRPYTGKPTFFDQIITSLVTVACGFMLASLIAIPLGIILGLNQGLYMAFNPIIQLLKP 156 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + W L N G ++ D Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPLFAKSFVNSLFTVALCSLWPTLINTAVGVTSVDKDLL 216 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ WR R I+LP P TG + G AW I +E+ + + GLG Sbjct: 217 NVSKVLRLSWWRHIRIIVLPSAIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+++ L L+R + Sbjct: 271 KFVWDEFQNGSSDSLGRIMVAVIVIGLIGLLLDRGMLQ 308 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 88/207 (42%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + +++ L + ++ L M PI+ +++ + L +L + Y Sbjct: 115 SLVTVACGFMLASLIAIPLGIILGLNQGLYMAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++F + +W + + ++ +DL VS+ RLS W+ + Sbjct: 175 VSDDPLFAKSFVNSLFTVALCSLWPTLINTAVGVTSVDKDLLNVSKVLRLSWWRHIRIIV 234 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 235 LPSAIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLGRI 288 Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266 + A++ + + L D+ + + + W Sbjct: 289 MVAVIVIGLIGLLLDRGMLQCQRWLSW 315 >gi|227113234|ref|ZP_03826890.1| sulfate ester ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 531 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 82/567 (14%), Positives = 185/567 (32%), Gaps = 77/567 (13%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----TTLRMLSAMVI 78 L L++ L + + I +P+ + +R++ Sbjct: 32 LVVPLLVLAGWWLASRHGWMSEQILPSPLAVIDSARAFIPEELIHQLPISLIRLVIGFSG 91 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + V +L +RRL + +P+ ++ +P L ++ ++ E Sbjct: 92 GIALGLVLGSLFGLNRRLNALFMPLFTVIAQVPTLAWIPLLMLSLGIG--------EALK 143 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 + + S +T + P+ L E++RS RL YL +P +P ++ + + Sbjct: 144 LVVLVKSVTVPVTLYTCAGIQQTPQKLHEMARSLRLPPAAFLRYLILPAMLPYVMTGIRL 203 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + S GW ++A E++ + G+G + + + L + +L + + F +++ Sbjct: 204 AFSTGWVALIAVELLASSE------GLGYLLVQSRQLFMLDLVFVCILIIGVLGFAGERV 257 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 L + W + W + + + + S + Sbjct: 258 LLKLERRWIH---------------WPAPVLGRDSLSTALPSLSLTPWL-------APLV 295 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + + + ++ + S ++D W +V G Sbjct: 296 LVALWQVSSVHEWVNVAFLPAPSSVIDALWTGLVQG-----------------------G 332 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + ++ R + ++ S I + VG +G P L + PL+ Sbjct: 333 LSVDLHASLLRALQGFVLGSAIGVLVGALLGGWRITDRLFNPALSALRCVALFAWLPLIT 392 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + + ++ G + P EVA +T + R +I Sbjct: 393 AWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQLPPALLEVAQVLRLTPVQTLRTLI 448 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP + P +G A AW +I +E GLG + + + ++ G Sbjct: 449 LPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----PSGEGLGGMMIRAQQLLESDRIMAG 503 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585 V+++ +R + R L Sbjct: 504 VVLIAAVAALFSRLI-----TLSERRL 525 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++D + L L + LR L V+ + L R + Sbjct: 314 LPAPSSVIDALWTGLVQGGLSVDLHASLLRALQGFVLGSAIGVLVGALLGGWRITDRLFN 373 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L ++ + + +L +F E A I I + + + + Q + + Sbjct: 374 PALSALRCVALFAWLPLITAWFGLG--------ESAKIVFIAVAAFFPVMLATRQGIAQL 425 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L EV++ RL+ Q L +P +P L + +++ W + +E + Sbjct: 426 PPALLEVAQVLRLTPVQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFMPSGE--- 482 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266 G+G + A + + I+ ++ + V L+ +L+ R + W Sbjct: 483 --GLGGMMIRAQQLLESDRIMAGVVLIAAVAALFSRLITLSERRLTRW 528 >gi|87119186|ref|ZP_01075084.1| putative nitrate transporter [Marinomonas sp. MED121] gi|86165577|gb|EAQ66844.1| putative nitrate transporter [Marinomonas sp. MED121] Length = 330 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 16/219 (7%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 Y+ Y +++ VV +AS+I IP+GI IG I S + P Q+ Sbjct: 102 SYVAKTRPYTGKPTFFDQIGTSLYTVVAGFALASLIAIPLGILIGLNSSIYSALNPIIQI 161 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPN 477 + PLV VS +++ + S + W L N G +A Sbjct: 162 FKPVSPLAWLPLVTMVVSATYVSADPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAIDK 221 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 D V+ + R I++P P TG + G AW I +E+ + + Sbjct: 222 DLLNVSKVLRLNWLTHVRKIVVPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNP 275 Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 GLG ++ + + G S +++ VL++ L+R + Sbjct: 276 GLGKFVWDEFQNGSSNSLGRIMVAVLMIGFIGFVLDRAM 314 Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 85/207 (41%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + +++ ++ L L + + L PI+ I + + L +L + Y Sbjct: 123 SLYTVVAGFALASLIAIPLGILIGLNSSIYSALNPIIQIFKPVSPLAWLPLVTMVVSATY 182 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + L ++F + +W + + I +DL VS+ RL+ + Sbjct: 183 VSADPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAIDKDLLNVSKVLRLNWLTHVRKIV 242 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 VP S+P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 243 VPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 296 Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVW 266 + A+L + + F+ D+ L + M+ W Sbjct: 297 MVAVLMIGFIGFVLDRAMLSLQKMVSW 323 >gi|89072206|ref|ZP_01158785.1| putative nitrate transporter [Photobacterium sp. SKA34] gi|89051738|gb|EAR57190.1| putative nitrate transporter [Photobacterium sp. SKA34] Length = 324 Score = 173 bits (439), Expect = 8e-41, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 16/211 (7%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Y ++ V I+AS+I IP+G+ +G + P QLL Sbjct: 104 YTGKATFFDQIVTSLVTVACGFILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLA 163 Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + PLV VS ++ + ++ L + + W L N G + D V+ Sbjct: 164 WLPLVTMVVSASYVTKDPLVAKSFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRV 223 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 ++ W+ R I+LP P TG + G AW I +E+ + + GLG ++ + Sbjct: 224 LRLSYWQHIRTIVLPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWD 277 Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + G S +++ V+++ L L+R + Sbjct: 278 EFQNGSASSLSRIMVAVVMIGFIGLMLDRLM 308 Score = 140 bits (354), Expect = 6e-31, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 87/199 (43%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + +++ + + + +L M PI+ +++ + L +L + Y Sbjct: 117 SLVTVACGFILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASY 176 Query: 128 PGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 K V + L ++ + +W + + N+ +DL VSR RLS WQ + Sbjct: 177 VTKDPLVAKSFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIV 236 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 237 LPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSASSLSRI 290 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A++ + + + D+L+ Sbjct: 291 MVAVVMIGFIGLMLDRLML 309 >gi|227327597|ref|ZP_03831621.1| sulfate ester ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 531 Score = 173 bits (438), Expect = 8e-41, Method: Composition-based stats. Identities = 83/567 (14%), Positives = 184/567 (32%), Gaps = 77/567 (13%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----TTLRMLSAMVI 78 L L++ L + + I +P+ + +R++ Sbjct: 32 LIVPLLVLAGWWLASRHGWMSEQILPSPLAVIDSARAFIPEELIHQLPISLIRLVIGFSG 91 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + V +L +RRL + +P+ ++ IP L ++ ++ E Sbjct: 92 GIALGLVLGSLFGLNRRLNALFMPLFTVIAQIPTLAWIPLLMLSLGIG--------EALK 143 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 + + S +T + P+ L E++RS RL YL +P +P ++ + + Sbjct: 144 LVVLVKSVTVPVTLYTCAGIQQTPQKLYEMARSLRLPPAAFLRYLILPAMLPYVMTGIRL 203 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + S GW ++A E++ + G+G + + + L + +L + + F +++ Sbjct: 204 AFSTGWVALIAVELLASSE------GLGYLLVQSRQLFMLDLVFVCILIIGILGFAGERV 257 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR 318 L + W + W + + + + S + Sbjct: 258 LLKLERRWIH---------------WPAPVLGRDSLSTALPSLSLTPWL-------APVV 295 Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + + + ++ + S +LD W + G + Sbjct: 296 LVALWQVSSVHEWVNVAFLPAPSSVLDALWRGLAQGGLLADL------------------ 337 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ R + ++ S I + VG +G P L + PL+ Sbjct: 338 -----HASLLRALQGFVLGSAIGVLVGALLGGWRIADRLFNPALSALRCVALFAWLPLIT 392 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + + ++ G + P EVA +T + R +I Sbjct: 393 AWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQLPPALLEVAQVLRLTPVQTLRTLI 448 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP + P +G A AW +I +E GLG + + + ++ G Sbjct: 449 LPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----PSGEGLGGMMIRAQQLLESDRIMAG 503 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCL 585 V+++ +R + R L Sbjct: 504 VVLIAAVAALFSRLI-----TLSERRL 525 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++D + L L + LR L V+ + L R + Sbjct: 314 LPAPSSVLDALWRGLAQGGLLADLHASLLRALQGFVLGSAIGVLVGALLGGWRIADRLFN 373 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L ++ + + +L +F E A I I + + + + Q + + Sbjct: 374 PALSALRCVALFAWLPLITAWFGLG--------ESAKIVFIAVAAFFPVMLATRQGIAQL 425 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L EV++ RL+ Q L +P +P L + +++ W + +E + Sbjct: 426 PPALLEVAQVLRLTPVQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFMPSGE--- 482 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266 G+G + A + + I+ ++ + V L+ +L+ R + W Sbjct: 483 --GLGGMMIRAQQLLESDRIMAGVVLIAAVAALFSRLITLSERRLTRW 528 >gi|90577437|ref|ZP_01233248.1| putative nitrate transporter [Vibrio angustum S14] gi|90440523|gb|EAS65703.1| putative nitrate transporter [Vibrio angustum S14] Length = 324 Score = 173 bits (438), Expect = 1e-40, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 16/211 (7%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Y ++ V I+AS+I IP+G+ +G + P QLL Sbjct: 104 YTGKATFFDQIVTSLVTVACGFILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLA 163 Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + PLV VS ++ + ++ L + + W L N G + D V+ Sbjct: 164 WLPLVTMVVSASYVTKDPLVAKSFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRV 223 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 ++ W+ R I+LP P TG + G AW I +E+ + + GLG ++ + Sbjct: 224 LRLSYWQHIRTIVLPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWD 277 Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + G S +++ V+++ L L+R + Sbjct: 278 EFQNGSAASLSRIMVAVVMIGFIGLMLDRLM 308 Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 87/199 (43%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + +++ + + + +L M PI+ +++ + L +L + Y Sbjct: 117 SLVTVACGFILASVIAIPLGLVLGLNHKLYMAFNPIIQLLKPVSPLAWLPLVTMVVSASY 176 Query: 128 PGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 K V + L ++ + +W + + N+ +DL VSR RLS WQ + Sbjct: 177 VTKDPLVAKSFLNSMLTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSYWQHIRTIV 236 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 237 LPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSAASLSRI 290 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A++ + + + D+L+ Sbjct: 291 MVAVVMIGFIGLMLDRLML 309 >gi|260768120|ref|ZP_05877054.1| nitrate ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260616150|gb|EEX41335.1| nitrate ABC transporter permease protein [Vibrio furnissii CIP 102972] Length = 322 Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V +AS+I IP+GI +G + P QLL Sbjct: 97 VRIRPYTGKPTFFDQIGTSLVTVAAGFALASLIAIPLGIVLGLNHGLYQAFNPIIQLLKP 156 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + W L N G ++ D Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPMFAKSFVNSLFTVALCSLWPTLINTAVGVTSVDKDLI 216 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 217 NVSKVLRLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVIAIGFIGLLLDRGMLQ 308 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 84/200 (42%), Gaps = 12/200 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + ++ L + + L PI+ +++ + L +L + Y Sbjct: 115 SLVTVAAGFALASLIAIPLGIVLGLNHGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++F + +W + + ++ +DL VS+ RLS WQ + Sbjct: 175 VSDDPMFAKSFVNSLFTVALCSLWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIV 234 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288 Query: 242 LYAMLTMLGVIFLYDQLLFR 261 + A++ + + L D+ + + Sbjct: 289 MVAVIAIGFIGLLLDRGMLQ 308 >gi|254418147|ref|ZP_05031871.1| ABC transporter, permease protein [Brevundimonas sp. BAL3] gi|196184324|gb|EDX79300.1| ABC transporter, permease protein [Brevundimonas sp. BAL3] Length = 365 Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 16/227 (7%) Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 G+ G V F Y I ++F V +A+++ +P+G+ G ++ Sbjct: 132 AGLEAAGRGGEVRDFRYAGSPSFIDQIFTSLFTVAFGFGLATVVAVPLGLVCGLSKGFNA 191 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL-------SLLMIFGTQWYILFNVI 469 P Q+ + P+V VS P+ L +++++ + W L N Sbjct: 192 AFNPLVQIFKPISPLAWLPIVTMVVSATMTRPDPALPKSFVISAVVVMLCSLWPTLINTA 251 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 GA++ D V ++ + R +ILP PY TG + G W I +E+ + Sbjct: 252 VGAASIDRDLLNVGRVLRLSPFARLRRLILPSALPYIFTGMRLSLGVGWMVLIAAEMLA- 310 Query: 530 GHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + GLG ++ + + G S ++ V+++ L+R + Sbjct: 311 -----QNPGLGKFVWDEFQNGSEQSLARIMFAVIVIGLIGFLLDRLM 352 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 12/198 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + ++ + + S+ P++ I + I L +L + Sbjct: 161 SLFTVAFGFGLATVVAVPLGLVCGLSKGFNAAFNPLVQIFKPISPLAWLPIVTMVVSATM 220 Query: 128 P---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + + + +W + +I RDL V R RLS + + L Sbjct: 221 TRPDPALPKSFVISAVVVMLCSLWPTLINTAVGAASIDRDLLNVGRVLRLSPFARLRRLI 280 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDLLAI 241 +P ++P + M +S+ GW ++A+EM+ PG+G ++ + EQ L I Sbjct: 281 LPSALPYIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSEQSLARI 334 Query: 242 LYAMLTMLGVIFLYDQLL 259 ++A++ + + FL D+L+ Sbjct: 335 MFAVIVIGLIGFLLDRLM 352 >gi|71282501|ref|YP_269991.1| putative nitrate ABC transporter permease [Colwellia psychrerythraea 34H] gi|71148241|gb|AAZ28714.1| putative nitrate ABC transporter, permease protein [Colwellia psychrerythraea 34H] Length = 315 Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 16/218 (7%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y+ Y ++F V ++A+II IP+GIW+G ++S I P Q+ Sbjct: 88 YVGKIRAYTGKETFFDQILTSLFTVTCGFLVAAIIAIPLGIWMGLNKRLNSAINPIVQIF 147 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPND 478 + PLV VS +++ + +S + + + W ++ N G S+ +D Sbjct: 148 KPVSPLAWLPLVTMVVSALYVSDDPMVSKSFLTSLITVSLCSLWPMVINTSIGVSSIDSD 207 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 V+ + + I++P P TG + G AW I +E+ + + G Sbjct: 208 LLNVSKVLRLPTLTHIKKIVIPASIPMIFTGMRLSFGVAWMVLIAAEMLA------QNPG 261 Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 LG ++ + + G S ++ V+++ L+R + Sbjct: 262 LGKFVWDEFQNGSSDSLARIMAAVIVIGFIGFLLDRAM 299 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 12/201 (5%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + + +++ + ++RL + PI+ I + + L +L + Sbjct: 106 LTSLFTVTCGFLVAAIIAIPLGIWMGLNKRLNSAINPIVQIFKPVSPLAWLPLVTMVVSA 165 Query: 126 LY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 LY V + L ++ + +W M + + +I DL VS+ RL Sbjct: 166 LYVSDDPMVSKSFLTSLITVSLCSLWPMVINTSIGVSSIDSDLLNVSKVLRLPTLTHIKK 225 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLL 239 + +P S+P + M +S W ++A+EM+ PG+G ++ + L Sbjct: 226 IVIPASIPMIFTGMRLSFGVAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLA 279 Query: 240 AILYAMLTMLGVIFLYDQLLF 260 I+ A++ + + FL D+ + Sbjct: 280 RIMAAVIVIGFIGFLLDRAML 300 >gi|323497142|ref|ZP_08102162.1| nitrate ABC transporter permease protein [Vibrio sinaloensis DSM 21326] gi|323317717|gb|EGA70708.1| nitrate ABC transporter permease protein [Vibrio sinaloensis DSM 21326] Length = 322 Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A+ + IP+GI +G + P QLL Sbjct: 97 VKIRPYTGKPTFFDQIVTSLITVASGFLLATAVAIPLGIVLGLNQGVYQAFNPVIQLLKP 156 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + L + + W L N G ++ D Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLI 216 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 217 NVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVITIGFIGLLLDRGMLQ 308 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 88/207 (42%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + S +++ + ++ + P++ +++ + L +L + Y Sbjct: 115 SLITVASGFLLATAVAIPLGIVLGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSATY 174 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 175 VSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIV 234 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288 Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVW 266 + A++T+ + L D+ L + ++ W Sbjct: 289 MVAVITIGFIGLLLDRGMLQLQKLLSW 315 >gi|315179819|gb|ADT86733.1| nitrate transporter system, permease component [Vibrio furnissii NCTC 11218] Length = 322 Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V +AS+I IP+GI +G + + P QLL Sbjct: 97 VRIRPYTGKPTFFDQIGTSLVTVAAGFALASLIAIPLGIVLGLNHGLYQAVNPIIQLLKP 156 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + L + + W L N G ++ D Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPMFAKSFVNSLLTVALCSVWPTLINTAVGVTSVDKDLI 216 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 217 NVSKVLRLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVIAIGFIGLLLDRGMLQ 308 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 84/200 (42%), Gaps = 12/200 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + ++ L + + L + PI+ +++ + L +L + Y Sbjct: 115 SLVTVAAGFALASLIAIPLGIVLGLNHGLYQAVNPIIQLLKPVSPLAWLPIVTMVVSATY 174 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + VW + + ++ +DL VS+ RLS WQ + Sbjct: 175 VSDDPMFAKSFVNSLLTVALCSVWPTLINTAVGVTSVDKDLINVSKVLRLSWWQHIRTIV 234 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288 Query: 242 LYAMLTMLGVIFLYDQLLFR 261 + A++ + + L D+ + + Sbjct: 289 MVAVIAIGFIGLLLDRGMLQ 308 >gi|218249102|ref|YP_002374473.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 8801] gi|257062188|ref|YP_003140076.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 8802] gi|218169580|gb|ACK68317.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8801] gi|256592354|gb|ACV03241.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8802] Length = 277 Score = 170 bits (432), Expect = 5e-40, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I+ I +GI IG I + P Q+L P + P+ Sbjct: 79 LFWQITASLQRVAIGYSLAAIVGIALGILIGSNSFIYDAVDPIFQVLRTVPPLAWLPIA- 137 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + NP+ ++ W I+ N G P D+K VA ++G++++ I+ Sbjct: 138 -LAGFEEANPS--AIFVIFITAIWPIILNTTVGVQQIPKDYKNVAKVLRLSGFKYFWEIM 194 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P PY TG G +W A + +E+ G G+G +I +S PE+++ Sbjct: 195 FPAAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDSYNSSQLPEIIVA 248 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L+R + Sbjct: 249 LIYVGLVGLILDRLV 263 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ ++ + L + + + PI +++++P L +L Sbjct: 77 KGLFWQITASLQRVAIGYSLAAIVGIALGILIGSNSFIYDAVDPIFQVLRTVPPLAWLPI 136 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 + F P +AIF IF + +W + + + IP+D + V++ RLSG++ Sbjct: 137 ALAGFEEANP--------SAIFVIFITAIWPIILNTTVGVQQIPKDYKNVAKVLRLSGFK 188 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW + P ++P + + + + W +VA+EM+V G GIG +I + L Sbjct: 189 YFWEIMFPAAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGFFIWDSYNSSQL 242 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V + D+L+ Sbjct: 243 PEIIVALIYVGLVGLILDRLV 263 >gi|254503979|ref|ZP_05116130.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222440050|gb|EEE46729.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 360 Score = 170 bits (432), Expect = 5e-40, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + H TY I ++ V + +IA+II +P+GI G + I P Q+ Sbjct: 138 IKHRTYTGKPTYIDQIGTSLLTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKP 197 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS + NP WLS + + + W L N G ++ D Sbjct: 198 VSPLAWLPIVTMIVSATYANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLM 257 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V + W+ ++LP P TG + G W I +E+ + + GLG Sbjct: 258 NVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S ++++ VL + L+R ++ + + Sbjct: 312 KFVWDEFQNGSSQSLAKIMVAVLTIGLIGFMLDRLMFALQRAFTFSANR 360 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + L + +I+ + + SR + P++ I + + L +L + Y Sbjct: 156 SLLTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKPVSPLAWLPIVTMIVSATY 215 Query: 128 PGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + L + + +W + + ++ +DL V R +L W+ L Sbjct: 216 ANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLV 275 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + Q L I Sbjct: 276 LPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 329 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+LT+ + F+ D+L+F Sbjct: 330 MVAVLTIGLIGFMLDRLMF 348 >gi|149377870|ref|ZP_01895600.1| putative nitrate transporter [Marinobacter algicola DG893] gi|149357872|gb|EDM46364.1| putative nitrate transporter [Marinobacter algicola DG893] Length = 331 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y + ++ V+ ++A+II +P+GI IG H S+ I P Q+ Sbjct: 111 VKIRDYPGAPTFVDQIFTSLGTVLAGFVLATIIAVPLGIIIGLNRHFSAAINPLIQIFKP 170 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS +++ + L + + + W L N G SA D Sbjct: 171 VSPLAWLPLVTMVVSATYVSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVSAVNPDLL 230 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W R ++LP P TG + G AW I +E+ + ++ GLG Sbjct: 231 NVSKVLQLSFWTHVRKVVLPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLG 284 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S +++ VL + L+R + Sbjct: 285 KFVWDEFQNGSSESLSRIMVAVLAIGFIGFLLDRIM 320 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 86/209 (41%), Gaps = 14/209 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + +L+ V++ + + +R + P++ I + + L +L + Y Sbjct: 129 SLGTVLAGFVLATIIAVPLGIIIGLNRHFSAAINPLIQIFKPVSPLAWLPLVTMVVSATY 188 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + L ++ + +W + + + DL VS+ +LS W + Sbjct: 189 VSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVSAVNPDLLNVSKVLQLSFWTHVRKVV 248 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 249 LPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLGKFVWDEFQNGSSESLSRI 302 Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVWSN 268 + A+L + + FL D+ LL + + W+ Sbjct: 303 MVAVLAIGFIGFLLDRIMLLIQKKVAWNE 331 >gi|21666014|gb|AAM73542.1|AF283498_2 nitrate transporter integral membrane protein [Azospirillum brasilense] Length = 363 Score = 170 bits (430), Expect = 8e-40, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y + ++ V ++ +++ +P+G+ G +++ + P Q+ Sbjct: 141 VKTRPYAGKPTYLDQILTSLKTVFTGFLLGALVAVPLGVACGLSRTVNAAMNPLIQIFKP 200 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS + N L ++ + + W L N G S+ D Sbjct: 201 VSPLAWLPLVTMVVSATVSSDNPTFEKSFLTSAVTVTLCSLWPTLINTAVGVSSIDKDLM 260 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V ++G R ++LP PY TG + G W I +E+ + + GLG Sbjct: 261 NVGKVLQLSGPTMVRRLVLPSALPYIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 314 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S +++ V + L+R + Sbjct: 315 KFVWDEFQNGSSSSLARIMVAVFTIGLIGFLLDRVM 350 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 85/222 (38%), Gaps = 13/222 (5%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P V P L Q + + + ++ L SR + + P++ Sbjct: 137 PAAEVKTRPYAGKPTYLDQ-ILTSLKTVFTGFLLGALVAVPLGVACGLSRTVNAAMNPLI 195 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 I + + L +L + + L + + +W + + +I Sbjct: 196 QIFKPVSPLAWLPLVTMVVSATVSSDNPTFEKSFLTSAVTVTLCSLWPTLINTAVGVSSI 255 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +DL V + +LSG L +P ++P + + +S+ GW ++A+EM+ Sbjct: 256 DKDLMNVGKVLQLSGPTMVRRLVLPSALPYIFTGLRLSLGVGWMVLIAAEMLA------Q 309 Query: 222 LPGIGSYIALAIKEQ---DLLAILYAMLTMLGVIFLYDQLLF 260 PG+G ++ + L I+ A+ T+ + FL D+++ Sbjct: 310 NPGLGKFVWDEFQNGSSSSLARIMVAVFTIGLIGFLLDRVML 351 >gi|50123217|ref|YP_052384.1| sulfate ester ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49613743|emb|CAG77194.1| sulfate ester ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 543 Score = 170 bits (430), Expect = 8e-40, Method: Composition-based stats. Identities = 76/528 (14%), Positives = 174/528 (32%), Gaps = 73/528 (13%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 L + +R++ + V +L +RRL + +P+ ++ IP L ++ Sbjct: 83 PEELIHQLPISLMRLVIGFSGGIALGLVLGSLFGLNRRLNALFMPLFTVIAQIPTLAWIP 142 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 ++ E + + S +T + P+ L E+ RS RL Sbjct: 143 LLMLSLGIG--------EALKLVVLVKSVTVPVTLYTCAGIQQTPQKLHEMVRSLRLPPV 194 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 YL +P +P ++ + ++ S GW ++A E++ + G+G + + + Sbjct: 195 AFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------GLGYLLVQSRQLFM 248 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297 L + +L + + F +++L + + ++ + Sbjct: 249 LDLVFVCILIIGILGFTGERVLLKL----------------------------ERRWIHW 280 Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 +++ +L + + P + L +++ + V Sbjct: 281 PAPVLGR------DSLSYALPSLSLTPWLAPLMLIALWQISSTREWVNVAFLPAPSDVIE 334 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + ++ D+ ++ R + ++ S I + VG +G Sbjct: 335 AL----WSGLIQGGLLADL-------NASLLRALQGFMLGSAIGVLVGALLGGWRIADKL 383 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 P L + PL+ + + + + ++ G + P Sbjct: 384 FNPALSALRCVALFAWLPLITAWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQLPP 439 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 EVA +T + R +ILP + P +G A AW +I +E Sbjct: 440 ALLEVAQVLRLTPMQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----PSGE 494 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 GLG + + + ++ GV+++ +R + R L Sbjct: 495 GLGGMMIRAQQLLESDRIMAGVVLIAVVAALFSRLI-----TLSERRL 537 Score = 106 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P D+++ + L L + + LR L ++ + L R + Sbjct: 326 LPAPSDVIEALWSGLIQGGLLADLNASLLRALQGFMLGSAIGVLVGALLGGWRIADKLFN 385 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L ++ + + +L +F E A I I + + + + Q + + Sbjct: 386 PALSALRCVALFAWLPLITAWFGLG--------ESAKIVFIAVAAFFPVMLATRQGIAQL 437 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L EV++ RL+ Q L +P +P L + +++ W + +E + Sbjct: 438 PPALLEVAQVLRLTPMQTLRTLILPSVLPPLFSGLRLALMHAWTGAIGAEYFMPSGE--- 494 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266 G+G + A + + I+ ++ + V L+ +L+ R + W Sbjct: 495 --GLGGMMIRAQQLLESDRIMAGVVLIAVVAALFSRLITLSERRLTRW 540 >gi|260221748|emb|CBA30622.1| Nitrate transport permease protein nrtB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 287 Score = 169 bits (429), Expect = 1e-39, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 12/221 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W+ + D I LG ++ RV + ++A ++ IP+G IG P + + Sbjct: 74 IWKHLADPFYDKGPNDKGIAIQLGH-SLARVGLGFLLACVVAIPLGFVIGMSPLLHKALD 132 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + PL + + + + ++ + W +L N G ++ ++ Sbjct: 133 PFIQILKPISPLAWMPLALYTIK----DSSASGIFVIFICSVWPMLINTAFGVASVKREW 188 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + + R +ILP P +TG + G AW + +E+ G TG+ Sbjct: 189 LNVARTLEVKPLRKAFQVILPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGI 242 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLY 580 G ++ S V+ + ++ + L+ ++ L + Sbjct: 243 GYFVWNEWNNLSLTNVLFAIGVIGVMGMLLD-LVFARLQKW 282 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 15/202 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ +++ + + S L L P + I++ I L ++ + Sbjct: 96 LGHSLARVGLGFLLACVVAIPLGFVIGMSPLLHKALDPFIQILKPISPLAWMPLALY--- 152 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + IF IF VW M + + ++ R+ V+R+ + +K + + Sbjct: 153 -----TIKDSSASGIFVIFICSVWPMLINTAFGVASVKREWLNVARTLEVKPLRKAFQVI 207 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA+EM+V G GIG ++ L +L+A Sbjct: 208 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVLFA 261 Query: 245 MLTMLGVIFLYDQLLFRPMIVW 266 + + + L D L+F + W Sbjct: 262 IGVIGVMGMLLD-LVFARLQKW 282 >gi|260366125|ref|ZP_05778585.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260879767|ref|ZP_05892122.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260896812|ref|ZP_05905308.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260902977|ref|ZP_05911372.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308087350|gb|EFO37045.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308092367|gb|EFO42062.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308108312|gb|EFO45852.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308114769|gb|EFO52309.1| nitrate/sulfonate/bicarbonate ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|328470814|gb|EGF41725.1| nitrate ABC transporter permease protein [Vibrio parahaemolyticus 10329] Length = 321 Score = 169 bits (429), Expect = 1e-39, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A++I IP+GI +G + P QLL Sbjct: 96 VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + + W L N G ++ D Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307 Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ + + ++ L PI+ +++ + L +L + Y Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311 >gi|153837223|ref|ZP_01989890.1| nitrate transporter system, permease component [Vibrio parahaemolyticus AQ3810] gi|149749486|gb|EDM60240.1| nitrate transporter system, permease component [Vibrio parahaemolyticus AQ3810] Length = 323 Score = 169 bits (429), Expect = 1e-39, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A++I IP+GI +G + P QLL Sbjct: 98 VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 157 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + + W L N G ++ D Sbjct: 158 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 217 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 218 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 271 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 272 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 309 Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ + + ++ L PI+ +++ + L +L + Y Sbjct: 116 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 175 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 176 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 235 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 236 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 289 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 290 MVAVITIGFIGLMLDRGMLQ-LQKW 313 >gi|28900912|ref|NP_800567.1| putative nitrate transporter [Vibrio parahaemolyticus RIMD 2210633] gi|28809358|dbj|BAC62400.1| putative nitrate transporter [Vibrio parahaemolyticus RIMD 2210633] Length = 307 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A++I IP+GI +G + P QLL Sbjct: 82 VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 141 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + + W L N G ++ D Sbjct: 142 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 201 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 202 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 255 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 256 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 293 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ + + ++ L PI+ +++ + L +L + Y Sbjct: 100 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 159 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 160 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 219 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 220 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 273 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 274 MVAVITIGFIGLMLDRGMLQ-LQKW 297 >gi|260777511|ref|ZP_05886405.1| nitrate ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260607177|gb|EEX33451.1| nitrate ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 322 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A+++ IP+GI +G + P QLL Sbjct: 97 VKIRPYTGKPTFFDQIITSLITVAAGFLLATLLAIPLGIMLGLNQGLYQAFNPIIQLLKP 156 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + L + + W L N G ++ D Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPLFAKSFINSLLTVALCSLWPTLINTAVGVTSVDKDLI 216 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 217 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 308 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ L + ++ L PI+ +++ + L +L + Y Sbjct: 115 SLITVAAGFLLATLLAIPLGIMLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 175 VSDDPLFAKSFINSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 234 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 289 MVAVITIGFIGLMLDRGMLQ-LQKW 312 >gi|91224555|ref|ZP_01259816.1| putative nitrate transporter [Vibrio alginolyticus 12G01] gi|91190443|gb|EAS76711.1| putative nitrate transporter [Vibrio alginolyticus 12G01] Length = 321 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A++I IP+GI +G + P QLL Sbjct: 96 VKIRPYTGKPTFFDQIITSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + + W L N G ++ D Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307 Score = 138 bits (347), Expect = 4e-30, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ + + ++ L PI+ +++ + L +L + Y Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311 >gi|262396901|ref|YP_003288754.1| nitrate ABC transporter permease protein [Vibrio sp. Ex25] gi|262340495|gb|ACY54289.1| nitrate ABC transporter permease protein [Vibrio sp. Ex25] Length = 321 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A++I IP+GI +G + P QLL Sbjct: 96 VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + + W L N G ++ D Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ + + ++ L PI+ +++ + L +L + Y Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311 >gi|332994482|gb|AEF04537.1| putative nitrate ABC transporter permease [Alteromonas sp. SN2] Length = 331 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 16/218 (7%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y + +++ V+V +IAS+I +PVGI G + I P QL Sbjct: 104 YEPKTREFTGSPTFFDQIWTSLYTVMVGFLIASVIAVPVGILCGLSKSAYAAINPLIQLF 163 Query: 426 AAFPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPND 478 + PLV VS +++ + + +L + W L N G SA D Sbjct: 164 KPVSPLAWLPLVTMVVSALYVSDDPMFSKSFVTSALTVSLCCLWPTLINTAVGVSAIDKD 223 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 V+ +T IILP P TG + G W I +E+ + + G Sbjct: 224 LLNVSKVLRLTPMSHLTKIILPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPG 277 Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 LG ++ + + G S +++ VL + L+R + Sbjct: 278 LGKFVWDEFQNGSSESLARIMVAVLTIGAIGFILDRIM 315 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 86/207 (41%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + ++ +I+ + L S+ + P++ + + + L +L + LY Sbjct: 124 SLYTVMVGFLIASVIAVPVGILCGLSKSAYAAINPLIQLFKPVSPLAWLPLVTMVVSALY 183 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + + +W + + I +DL VS+ RL+ + Sbjct: 184 VSDDPMFSKSFVTSALTVSLCCLWPTLINTAVGVSAIDKDLLNVSKVLRLTPMSHLTKII 243 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 244 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 297 Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266 + A+LT+ + F+ D+++ + + W Sbjct: 298 MVAVLTIGAIGFILDRIMLSVQRAVSW 324 >gi|327482790|gb|AEA86100.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri DSM 4166] Length = 289 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 20/268 (7%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI---------AWQSIG 365 + R +++ QL + +L + W + G + W+ I Sbjct: 19 RPSRAAALMQRSGRYAVQQLLPPLVILLVLGVIWEMLCSGADAALPPPSQVIAETWELIV 78 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 DV + W ++ RV V ++A + + +G+ IG + P Q+L Sbjct: 79 DPFYDNGGNDVG-LAWQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVL 137 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL ++ H + ++ W I+ N G P D++ VA Sbjct: 138 RTVPPLAWLPLSLAGFQDSHPS----ALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQV 193 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + G+ +++ I+LP PY TG G +W A I +E+ G G+G +I + Sbjct: 194 LQLNGFEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG------VGIGFFIWD 247 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +++L ++ + L+R + Sbjct: 248 AWNASRISDIILALVYIGVVGFVLDRLV 275 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 96/200 (48%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ +++++ L +S L PI +++++P L +L + Sbjct: 90 GLAWQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPLS 149 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + +P +A+F IF + +W + + + NIP+D V++ +L+G++ Sbjct: 150 LAGFQDSHP--------SALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEY 201 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P + P + + + + W ++A+EM++ G GIG +I A + Sbjct: 202 FKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV------GIGFFIWDAWNASRIS 255 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V F+ D+L+ Sbjct: 256 DIILALVYIGVVGFVLDRLV 275 >gi|261823527|ref|YP_003261633.1| binding-protein-dependent transporters inner membrane component [Pectobacterium wasabiae WPP163] gi|261607540|gb|ACX90026.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium wasabiae WPP163] Length = 536 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 77/531 (14%), Positives = 173/531 (32%), Gaps = 73/531 (13%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 L + +R+ + V +L +RRL + +P+ ++ IP L Sbjct: 73 DFVPEELIHQLPISLMRLAIGFSGGIALGLVLGSLFGLNRRLNALFMPLFTVIAQIPTLA 132 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 ++ ++ E + + S +T + P+ L E++RS RL Sbjct: 133 WIPLLMLSLGIG--------EALKLVVLVKSVTVPVTLYTCAGIQQTPQKLHEMARSLRL 184 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 YL +P +P ++ + ++ S GW ++A E++ + G+G + + + Sbjct: 185 PPIAFLRYLILPAMLPYVMTGVRLAFSTGWVALIAVELLASSE------GLGYLLVQSRQ 238 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNF 294 L + +L + + F +++L + W + W + + + Sbjct: 239 LFMLDLVFVCILIIGILGFSGERVLLKLERRWIH---------------WPAPILGRDSL 283 Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 + S + + + + ++ + S +++ W +V G Sbjct: 284 SSALSGLSLTPWL-------APLVLVALWQVSSTREWVNVAFLPAPSDVIEALWSGLVQG 336 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 + ++ R + ++ S I VG +G Sbjct: 337 GLLADLN-----------------------ASLLRALQGFLLGSGIGALVGALLGNWRIA 373 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 P L + PL+ + + + + ++ G + Sbjct: 374 DRLFNPALSALRCVALFAWLPLITAWFGLG----ESAKIVFIAVAAFFPVMLATRQGIAQ 429 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P EVA +T + R ++LP + P +G A AW +I +E Sbjct: 430 LPPALLEVAQVLRLTPIQTLRTLVLPSVLPPLFSGLRLALMHAWTGAIGAEYFM-----P 484 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 GLG + + + ++ GV+++ +R + R L Sbjct: 485 SGEGLGGMMIRAQQLLESDRIMAGVVLIAIVAALFSRLI-----ALSERRL 530 Score = 106 bits (266), Expect = 8e-21, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P D+++ + L L + + LR L ++ + L R + Sbjct: 319 LPAPSDVIEALWSGLVQGGLLADLNASLLRALQGFLLGSGIGALVGALLGNWRIADRLFN 378 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L ++ + + +L +F E A I I + + + + Q + + Sbjct: 379 PALSALRCVALFAWLPLITAWFGLG--------ESAKIVFIAVAAFFPVMLATRQGIAQL 430 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L EV++ RL+ Q L +P +P L + +++ W + +E + Sbjct: 431 PPALLEVAQVLRLTPIQTLRTLVLPSVLPPLFSGLRLALMHAWTGAIGAEYFMPSGE--- 487 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVW 266 G+G + A + + I+ ++ + V L+ +L+ R + W Sbjct: 488 --GLGGMMIRAQQLLESDRIMAGVVLIAIVAALFSRLIALSERRLTRW 533 >gi|269967484|ref|ZP_06181541.1| putative nitrate transporter [Vibrio alginolyticus 40B] gi|269827925|gb|EEZ82202.1| putative nitrate transporter [Vibrio alginolyticus 40B] Length = 321 Score = 168 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A++I IP+GI +G + P QLL Sbjct: 96 VKIRPYTGKPTFFDQIITSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + + W L N G ++ D Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLV 215 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ + + ++ L PI+ +++ + L +L + Y Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLVNVSKVLQLSWWQHIRTIV 233 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311 >gi|332529936|ref|ZP_08405887.1| nitrate ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332040633|gb|EGI77008.1| nitrate ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 305 Score = 168 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 11/216 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW+ + D I LG ++ RV + ++A ++ +P+G IG P + + Sbjct: 92 AWKHLSNPFYDNGPNDKGIAIQLGH-SLARVGLGFLLACLVAVPLGFVIGMSPLLRRALD 150 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P+ Q+L + PL + + + + ++ + W +L N G +A D+ Sbjct: 151 PYIQVLKPISPLAWMPLALYTIK----DSSASGIFVIFICSVWPMLINTAFGVAAVRRDW 206 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA++ ++ R +ILP P VTG + G AW + +E+ G TG+ Sbjct: 207 LNVAATLEVSPLRKAFLVILPAAAPTIVTGMRISMGIAWLVIVAAEMLVGG------TGI 260 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 G ++ S V+ + ++ + L+ Sbjct: 261 GYFVWNEWNNLSLSNVIFAITVIGVVGMLLDLLFGR 296 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ +++ L + S L L P + +++ I L ++ + Sbjct: 114 LGHSLARVGLGFLLACLVAVPLGFVIGMSPLLRRALDPYIQVLKPISPLAWMPLALY--- 170 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + IF IF VW M + + + RD V+ + +S +K + + Sbjct: 171 -----TIKDSSASGIFVIFICSVWPMLINTAFGVAAVRRDWLNVAATLEVSPLRKAFLVI 225 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P +V M +SM W +VA+EM+V G GIG ++ L +++A Sbjct: 226 LPAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLSNVIFA 279 Query: 245 MLTMLGVIFLYDQLLFR 261 + + V L D L R Sbjct: 280 ITVIGVVGMLLDLLFGR 296 >gi|156976813|ref|YP_001447719.1| hypothetical protein VIBHAR_05589 [Vibrio harveyi ATCC BAA-1116] gi|156528407|gb|ABU73492.1| hypothetical protein VIBHAR_05589 [Vibrio harveyi ATCC BAA-1116] Length = 321 Score = 168 bits (427), Expect = 2e-39, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A++I IP+GI +G + P QLL Sbjct: 96 VKIRPYTGKPTFFDQIITSLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + + W L N G ++ D Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307 Score = 137 bits (346), Expect = 5e-30, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ + + ++ L PI+ +++ + L +L + Y Sbjct: 114 SLVTVTAGFLLATVIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311 >gi|288962947|ref|YP_003453241.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] gi|288915213|dbj|BAI76697.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] Length = 360 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y + ++ V ++ +++ +P+G+ G P +++ I P Q+ Sbjct: 138 VKTRPYAGKPTYLDQIVTSLKTVFTGFLLGALVAVPLGVASGLSPTVNAAINPLIQIFKP 197 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS + L ++ + + W L N G S+ D Sbjct: 198 VSPLAWLPLVTMVVSATVSGGDPLFEKSFLTSAITVTLCSLWPTLINTAVGVSSIDRDLM 257 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V ++G+ R ++LP PY TG + G W I +E+ + + GLG Sbjct: 258 NVGKVLQLSGFTMVRRLVLPSALPYIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S ++++ V + L+R + Sbjct: 312 KFVWDEFQNGSSNSLAKIMVAVFTIGLIGFLLDRVM 347 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 88/222 (39%), Gaps = 13/222 (5%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P+ V P L Q + + + ++ L + S + + P++ Sbjct: 134 PKAEVKTRPYAGKPTYLDQ-IVTSLKTVFTGFLLGALVAVPLGVASGLSPTVNAAINPLI 192 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNI 161 I + + L +L + G E L + + +W + + +I Sbjct: 193 QIFKPVSPLAWLPLVTMVVSATVSGGDPLFEKSFLTSAITVTLCSLWPTLINTAVGVSSI 252 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 RDL V + +LSG+ L +P ++P + + +S+ GW ++A+EM+ Sbjct: 253 DRDLMNVGKVLQLSGFTMVRRLVLPSALPYIFTGLRLSLGVGWMVLIAAEMLA------Q 306 Query: 222 LPGIGSYIALAIKEQ---DLLAILYAMLTMLGVIFLYDQLLF 260 PG+G ++ + L I+ A+ T+ + FL D+++ Sbjct: 307 NPGLGKFVWDEFQNGSSNSLAKIMVAVFTIGLIGFLLDRVML 348 >gi|269963835|ref|ZP_06178149.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831453|gb|EEZ85598.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 321 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A+II IP+GI +G + P QLL Sbjct: 96 VKIRPYTGKPTFFDQIVTSLVTVTAGFLLATIIAIPLGIVLGLNQGLYQAFNPIIQLLKP 155 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + + + + W L N G ++ D Sbjct: 156 VSPLAWLPIVTMVVSATYVSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLI 215 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 216 NVSKVLQLSWWQHIRTIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 269 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 270 KFVWDEFQNGSSASLGRIMVAVITIGFIGLMLDRGMLQ 307 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ + + ++ L PI+ +++ + L +L + Y Sbjct: 114 SLVTVTAGFLLATIIAIPLGIVLGLNQGLYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 173 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 174 VSDDPMFAKSFINSLITVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRTIV 233 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 234 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 287 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + + D+ + + + W Sbjct: 288 MVAVITIGFIGLMLDRGMLQ-LQKW 311 >gi|330448062|ref|ZP_08311710.1| binding--dependent transport system inner membrane component family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492253|dbj|GAA06207.1| binding--dependent transport system inner membrane component family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 324 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 16/209 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + Y ++ V ++AS+I IP+G+ +G + P QLL Sbjct: 99 IRVRQYTGKATFFDQIGTSLVTVTCGFLLASVIAIPLGLLLGLNHKLYMAFNPVIQLLKP 158 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS +++ + ++ + + W L N G + D Sbjct: 159 VSPLAWLPLVTMVVSASYVSDDPLVAKSFLNSMFTVTLCSLWPTLINTAVGVTNVDKDLV 218 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ + I+LP P TG + G AW I +E+ + + GLG Sbjct: 219 NVSRVLRLSPWQHVKTIVLPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLG 272 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFV 566 ++ + + G S +++ V+++ Sbjct: 273 KFVWDEFQNGSSQSLGRIMVAVVMIGFIG 301 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 83/190 (43%), Gaps = 9/190 (4%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + +++ + L + +L M P++ +++ + L +L + Y Sbjct: 117 SLVTVTCGFLLASVIAIPLGLLLGLNHKLYMAFNPVIQLLKPVSPLAWLPLVTMVVSASY 176 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 V + L ++F + +W + + N+ +DL VSR RLS WQ + Sbjct: 177 VSDDPLVAKSFLNSMFTVTLCSLWPTLINTAVGVTNVDKDLVNVSRVLRLSPWQHVKTIV 236 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + + +S+ W ++A+EM+ PG+G ++ + ++ Sbjct: 237 LPSAIPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLGRI 290 Query: 245 MLTMLGVIFL 254 M+ ++ + F+ Sbjct: 291 MVAVVMIGFI 300 >gi|254490864|ref|ZP_05104047.1| ABC transporter, permease protein [Methylophaga thiooxidans DMS010] gi|224464036|gb|EEF80302.1| ABC transporter, permease protein [Methylophaga thiooxydans DMS010] Length = 340 Score = 168 bits (426), Expect = 3e-39, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 16/215 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V V ++AS+I IP+GI G + S I P Q+ Sbjct: 115 VTIRPYTGKETFFDQILTSLATVFVGFLLASVIAIPIGIVAGLSNTLYSAINPLIQIFKP 174 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ N + ++ ++ + W L N G S+ D Sbjct: 175 VSPLAWLPIVTMVVSALYVSDNPLFAKSFVTSAITVMLCSLWPTLINTAVGVSSIDKDLI 234 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 VA + +++P P TG + G W I +E+ + + GLG Sbjct: 235 NVARVLRLNYLTTIYKVVIPASIPMIFTGLRISLGIGWMVLIAAEMLA------QNPGLG 288 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRF 572 ++ + + G S +++ VL + L+R Sbjct: 289 KFVWDEFQNGSSESLSRIMVAVLTIGIVGFILDRI 323 Score = 143 bits (362), Expect = 6e-32, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 84/199 (42%), Gaps = 12/199 (6%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + + +++ + +A S L + P++ I + + L +L + Sbjct: 131 LTSLATVFVGFLLASVIAIPIGIVAGLSNTLYSAINPLIQIFKPVSPLAWLPIVTMVVSA 190 Query: 126 LYPGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 LY + + + + +W + + +I +DL V+R RL+ + Sbjct: 191 LYVSDNPLFAKSFVTSAITVMLCSLWPTLINTAVGVSSIDKDLINVARVLRLNYLTTIYK 250 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLL 239 + +P S+P + + +S+ GW ++A+EM+ PG+G ++ + L Sbjct: 251 VVIPASIPMIFTGLRISLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLS 304 Query: 240 AILYAMLTMLGVIFLYDQL 258 I+ A+LT+ V F+ D++ Sbjct: 305 RIMVAVLTIGIVGFILDRI 323 >gi|218440457|ref|YP_002378786.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218173185|gb|ACK71918.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 280 Score = 168 bits (426), Expect = 3e-39, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I+ I +G+ IG P + + P Q+L P + P+ + Sbjct: 83 LFWQLLASLQRVGIGFSLAAIVGISLGVLIGANPLMYDALDPIFQVLRTIPPLAWLPISL 142 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W I+ N G P D++ V+ ++ ++ I+ Sbjct: 143 AAFR----QSDPSAIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKVEYFFNIL 198 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG G +W A + +E+ G G+G +I ++ +++L Sbjct: 199 IPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDAYNSSRLGQIILA 252 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L+R + Sbjct: 253 LIYVGVVGLLLDRLV 267 Score = 163 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 22/257 (8%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINI--------LLHGIQETTVPRDIVDIVPITLDVHSLP 62 R++ I L+ F+++ I+ L ++ET P I L Sbjct: 25 SPRKVVAPIVALVIFLVIWQILCSGENPNLPSPLTVLKETWNPLIINPFYDNGGTDKGLF 84 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ + L + + L PI ++++IP L +L ++ Sbjct: 85 WQLLASLQRVGIGFSLAAIVGISLGVLIGANPLMYDALDPIFQVLRTIPPLAWLPISLAA 144 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P +AIF IF + +W + + + IP+D VSR +LS + F+ Sbjct: 145 FRQSDP--------SAIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKVEYFFN 196 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P + + + + W +VA+EM+V G GIG +I A L I+ Sbjct: 197 ILIPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGFFIWDAYNSSRLGQII 250 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + V L D+L+ Sbjct: 251 LALIYVGVVGLLLDRLV 267 >gi|237808527|ref|YP_002892967.1| binding-protein-dependent transport systems inner membrane component [Tolumonas auensis DSM 9187] gi|237500788|gb|ACQ93381.1| binding-protein-dependent transport systems inner membrane component [Tolumonas auensis DSM 9187] Length = 312 Score = 168 bits (425), Expect = 3e-39, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 16/221 (7%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + V Y ++ V ++AS+I IP+GI +G + + P Q+ Sbjct: 84 DFKVTVRPYTGRPTFFDQITTSLITVATGFLVASLIAIPMGIILGLNQWMYQALNPVIQI 143 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPN 477 L + PLV VS + + N ++ + + W L N G + Sbjct: 144 LKPISPLAWLPLVTMVVSAVYSSDNPLVAKSFINSAFTVTLCSLWPTLLNTTVGVANIDP 203 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 D K V+ + R I+LP P TG + G AW I +E+ + + Sbjct: 204 DLKNVSRVLKLDPLTHVRKIVLPSAIPMIFTGLRLSLGVAWMVLIAAEMLA------QNP 257 Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 GLG ++ + + G S +++ V+ + L+R + Sbjct: 258 GLGKFVWDEFQNGSAQSLARIMVAVVTIGIIGFMLDRGMLQ 298 Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + +++ L + ++ + L P++ I++ I L +L + +Y Sbjct: 105 SLITVATGFLVASLIAIPMGIILGLNQWMYQALNPVIQILKPISPLAWLPLVTMVVSAVY 164 Query: 128 PGKVIGAELAAI---FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + I F + +W + + NI DL+ VSR +L + Sbjct: 165 SSDNPLVAKSFINSAFTVTLCSLWPTLLNTTVGVANIDPDLKNVSRVLKLDPLTHVRKIV 224 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + Q L I Sbjct: 225 LPSAIPMIFTGLRLSLGVAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSAQSLARI 278 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + F+ D+ + + + W Sbjct: 279 MVAVVTIGIIGFMLDRGMLQ-LQKW 302 >gi|86361183|ref|YP_473070.1| nitrate ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86285285|gb|ABC94343.1| nitrate ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 297 Score = 168 bits (425), Expect = 3e-39, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ I Y ++ QD+ + W +++ RV +A++ + VG IG + Sbjct: 81 SYDLIAYPFFNYGSQDIG-LGWRVLVSLQRVAYGFGLAAVTGVIVGAIIGQSVWAMRGLD 139 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL ++ + N ++ + W ++ N G P D+ Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + + ++ I+LP PY TG G +W A + +E+ + G G+ Sbjct: 196 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ P++++ + + AL++ + Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + + + +S L PI +++++P L +L + Sbjct: 98 GLGWRVLVSLQRVAYGFGLAAVTGVIVGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V+ RL+ ++ Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 209 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + V F D+L+ Sbjct: 264 DIIVALAYIGIVGFALDKLV 283 >gi|261250974|ref|ZP_05943548.1| nitrate ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260937847|gb|EEX93835.1| nitrate ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 322 Score = 168 bits (425), Expect = 3e-39, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A+ I IP+GI +G + P QLL Sbjct: 97 VKIRPYTGKPTFFDQIVTSLVTVACGFLLATAIAIPLGIVLGLNQGVYQAFNPVIQLLKP 156 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + L + + W L N G ++ D Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLV 216 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 217 NVSRVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVITIGFIGLLLDRGMLQ 308 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 86/205 (41%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + +++ + ++ + P++ +++ + L +L + Y Sbjct: 115 SLVTVACGFLLATAIAIPLGIVLGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSATY 174 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VSR +LS WQ + Sbjct: 175 VSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLVNVSRVLQLSWWQHIRVIV 234 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++T+ + L D+ + + + W Sbjct: 289 MVAVITIGFIGLLLDRGMLQ-LQKW 312 >gi|254295130|ref|YP_003061153.1| binding-protein-dependent transporters inner membrane component [Hirschia baltica ATCC 49814] gi|254043661|gb|ACT60456.1| binding-protein-dependent transport systems inner membrane component [Hirschia baltica ATCC 49814] Length = 370 Score = 167 bits (424), Expect = 4e-39, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 82/215 (38%), Gaps = 15/215 (6%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V I+A++I P+GI +G P +S+ P Q+ Sbjct: 149 VRDRDYTGKQTYYQQIWTSLKTVFFGFILATVIAAPLGIIMGMSPAMSAAFNPIIQIFKP 208 Query: 428 FPANVFFPLVVSCVSYYHLNPN------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 + P+V VS L ++ + + W L N G ++ D Sbjct: 209 VSPLAWLPIVTMVVSATVATDGNMSKSFLTSAITVTLCSLWPTLINTAVGVASIDKDLVN 268 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 V + W ++LP P TG + G W I +E+ + + GLG Sbjct: 269 VGKVLKLDAWTKVTKLVLPSALPLIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGK 322 Query: 542 YIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S ++++ VL + L+RF+ Sbjct: 323 FVWDEFQNGSSQSLAKIMVAVLTIGIIGFILDRFM 357 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +++ + + S + PI+ I + + L +L + Sbjct: 167 SLKTVFFGFILATVIAAPLGIIMGMSPAMSAAFNPIIQIFKPVSPLAWLPIVTMVVSATV 226 Query: 128 P--GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G + + L + + +W + + +I +DL V + +L W K L + Sbjct: 227 ATDGNMSKSFLTSAITVTLCSLWPTLINTAVGVASIDKDLVNVGKVLKLDAWTKVTKLVL 286 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAIL 242 P ++P + M +S+ GW ++A+EM+ PG+G ++ + Q L I+ Sbjct: 287 PSALPLIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIM 340 Query: 243 YAMLTMLGVIFLYDQLL 259 A+LT+ + F+ D+ + Sbjct: 341 VAVLTIGIIGFILDRFM 357 >gi|116254785|ref|YP_770621.1| putative nitrate transporter permease component [Rhizobium leguminosarum bv. viciae 3841] gi|115259433|emb|CAK10571.1| putative nitrate transporter permease component [Rhizobium leguminosarum bv. viciae 3841] Length = 297 Score = 167 bits (424), Expect = 4e-39, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ I Y ++ QD+ + W I++ RV+ +A++ + VG IG + Sbjct: 81 SYDLIAYPFFNYGSQDIG-LGWRVLISLQRVLYGFGLAAVTGVIVGAIIGQSVWAMRGLD 139 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL ++ + N ++ + W ++ N G P D+ Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + + ++ I+LP PY TG G +W A + +E+ + G G+ Sbjct: 196 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ P++++ + + AL++ + Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+L ++ + + + +S L PI +++++P L +L + Sbjct: 98 GLGWRVLISLQRVLYGFGLAAVTGVIVGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V+ RL+ ++ Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 209 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + V F D+L+ Sbjct: 264 DIIVALAYIGIVGFALDKLV 283 >gi|300866337|ref|ZP_07111039.1| nitrate transport permease protein [Oscillatoria sp. PCC 6506] gi|300335664|emb|CBN56199.1| nitrate transport permease protein [Oscillatoria sp. PCC 6506] Length = 290 Score = 167 bits (423), Expect = 4e-39, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 16/258 (6%) Query: 12 SRRIFPNIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHS---LPQY 64 R+I + L +L+ I+ N L G + + I P + + L Sbjct: 26 RRKIIRPLVALAVILLIWQILCHDPNSTLPGPLKMISESGNLIINPFFDNGGTDKGLFWQ 85 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ ++ + L + + L PI ++++IP L +L ++ F Sbjct: 86 LLASLQRVAIGFTLAAILGISLGILIGTNSLMFDALDPIFQVLRTIPPLAWLPISLGAFQ 145 Query: 125 NLYPGKVIGA---ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 P + +G E++A+F I + +W + + + IP+D V+R RL + FW Sbjct: 146 QFNPFEGMGITTSEVSALFVILITAIWPIIINTTVGVQQIPQDYRNVARVLRLPRQKYFW 205 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + + + + W +VA+EM+V G GIG +I + L + Sbjct: 206 KILLPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGFFIWDSYNSSRLSHV 259 Query: 242 LYAMLTMLGVIFLYDQLL 259 + A++ + V L D+L+ Sbjct: 260 ILAVIYVGIVGLLLDRLV 277 Score = 166 bits (421), Expect = 8e-39, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 13/202 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I+ I +GI IG + + P Q+L P + P+ + Sbjct: 82 LFWQLLASLQRVAIGFTLAAILGISLGILIGTNSLMFDALDPIFQVLRTIPPLAWLPISL 141 Query: 439 SCV-------SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + +++ W I+ N G P D++ VA + Sbjct: 142 GAFQQFNPFEGMGITTSEVSALFVILITAIWPIIINTTVGVQQIPQDYRNVARVLRLPRQ 201 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +++ I+LP PY TG G +W A + +E+ G G+G +I +S Sbjct: 202 KYFWKILLPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDSYNSSR 255 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 V+L V+ + L L+R + Sbjct: 256 LSHVILAVIYVGIVGLLLDRLV 277 >gi|166364741|ref|YP_001657014.1| bicarbonate transport system permease protein [Microcystis aeruginosa NIES-843] gi|166087114|dbj|BAG01822.1| bicarbonate transport system permease protein [Microcystis aeruginosa NIES-843] Length = 276 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 112/260 (43%), Gaps = 26/260 (10%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----------H 59 S+ I P I L F++V ++++L G+ + P D++ + Sbjct: 22 HSQDILPPIIGTLGFLIVWQLVSML--GLIKLPPPSDLITNERTRTYLMYPFFDRGGIDK 79 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+L + + + + L L P+ ++++P L ++ + Sbjct: 80 GLFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWVPLS 139 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + P AA+F IF + VW + + + IP+D V + +LS + Sbjct: 140 LAALQQNQP--------AALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSSKKF 191 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F+ + +P ++P + + +++ W ++A+E+++ G + GIG +I A + + Sbjct: 192 FFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNYIS 246 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + GV L D+ + Sbjct: 247 DIILALFYIGGVGLLLDRFM 266 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ A+++ I VGI +G ++ + P Q L P + PL + Sbjct: 81 LFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWVPLSL 140 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W IL N G P D+ V ++ +++ I+ Sbjct: 141 AALQ----QNQPAALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSSKKFFFKIL 196 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG A G AW A I +E+ G + G+G +I ++ + +++L Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYISDIILA 251 Query: 559 VLIMCCFVLALNRFL 573 + + L L+RF+ Sbjct: 252 LFYIGGVGLLLDRFM 266 >gi|307944732|ref|ZP_07660070.1| binding-protein-dependent transport systems inner membrane component [Roseibium sp. TrichSKD4] gi|307771946|gb|EFO31169.1| binding-protein-dependent transport systems inner membrane component [Roseibium sp. TrichSKD4] Length = 360 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + Y I ++ V + +IA+II +P+GI G + I P Q+ Sbjct: 138 IKQRAYTGKPTYIDQIGTSLKTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKP 197 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS + NP WLS + + + W L N G ++ D Sbjct: 198 VSPLAWLPIVTMIVSATYANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLM 257 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V + W+ ++LP P TG + G W I +E+ + + GLG Sbjct: 258 NVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S ++++ VL + L+R ++ + + Sbjct: 312 KFVWDEFQNGSSQSLAKIMVAVLTIGIIGFMLDRLMFALQRAFTFSANR 360 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 85/199 (42%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +I+ + + SR + P++ I + + L +L + Y Sbjct: 156 SLKTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKPVSPLAWLPIVTMIVSATY 215 Query: 128 PGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + L + + +W + + ++ +DL V R +L W+ L Sbjct: 216 ANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLV 275 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + Q L I Sbjct: 276 LPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 329 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+LT+ + F+ D+L+F Sbjct: 330 MVAVLTIGIIGFMLDRLMF 348 >gi|118591229|ref|ZP_01548628.1| binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] gi|118436305|gb|EAV42947.1| binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] Length = 360 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 18/225 (8%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 Y I ++ V + +IA++I +P+GI G + I P Q+ Sbjct: 142 DYTGKPTYIDQIGTSLKTVGLGFLIATLIAVPLGIASGLSRSFNGAINPLIQIFKPVSPL 201 Query: 432 VFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + P+V VS + +P WLS + + + W L N G ++ D V Sbjct: 202 AWLPIVTMIVSATYADPVDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGR 261 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + W+ ++LP P TG + G W I +E+ + + GLG ++ Sbjct: 262 VLQLPTWKTVTKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVW 315 Query: 545 ESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 + + G S ++++ VL + L+R ++ + + Sbjct: 316 DEFQNGSSQSLAKIMVAVLTIGIIGFMLDRLMFALQRAFTFSANR 360 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 85/199 (42%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +I+ L + SR + P++ I + + L +L + Y Sbjct: 156 SLKTVGLGFLIATLIAVPLGIASGLSRSFNGAINPLIQIFKPVSPLAWLPIVTMIVSATY 215 Query: 128 PGKV---IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 V + L + + +W + + ++ +DL V R +L W+ L Sbjct: 216 ADPVDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTVTKLV 275 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + Q L I Sbjct: 276 LPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 329 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+LT+ + F+ D+L+F Sbjct: 330 MVAVLTIGIIGFMLDRLMF 348 >gi|254461331|ref|ZP_05074747.1| nitrate ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206677920|gb|EDZ42407.1| nitrate ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 277 Score = 167 bits (423), Expect = 6e-39, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 11/215 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 I AW+ + D I +G +++RV+V ++A++I IP+G IG Sbjct: 60 VIAKAWEQLSNPFYDAGPNDKGIGIQIGY-SIYRVLVGYLLAALIAIPLGFLIGMSRVAH 118 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + ++ + W +L N G + Sbjct: 119 KALNPFIQVLRPISPLAWMPLALFVIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 174 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 D+ VA + + + +ILP P VTG + G AW + +E+ G Sbjct: 175 REDWVNVARTHELGPLKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 229 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 TG+G Y+ V+ +L++ + L+ Sbjct: 230 -TGIGYYVWNEWNNLDLTSVIFSILMIGVVGMLLD 263 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 14/194 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+L +++ L L SR L P + +++ I L ++ + + Sbjct: 87 GYSIYRVLVGYLLAALIAIPLGFLIGMSRVAHKALNPFIQVLRPISPLAWMPLALFVIQD 146 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +E +AIF IF +W M + + + D V+R+ L + + + + Sbjct: 147 --------SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGPLKTAFTVIL 198 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P +V M +S+ W +VA+EM+V G GIG Y+ DL ++++++ Sbjct: 199 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 252 Query: 246 LTMLGVIFLYDQLL 259 L + V L D L Sbjct: 253 LMIGVVGMLLDAAL 266 >gi|332140154|ref|YP_004425892.1| putative nitrate ABC transporter, permease protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550176|gb|AEA96894.1| putative nitrate ABC transporter, permease protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 331 Score = 167 bits (422), Expect = 6e-39, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 82/218 (37%), Gaps = 16/218 (7%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y + +++ V+V IAS++ +PVGI G + I P QL Sbjct: 104 YEPKIRDFTGAPTFFDQIWTSLYTVMVGFFIASVVAVPVGILCGLSKSAYTAINPLIQLF 163 Query: 426 AAFPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPND 478 + PLV VS +++ + + + + W L N G S D Sbjct: 164 KPVSPLAWLPLVTMVVSALYVSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKD 223 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 V+ +T I+LP P TG + G W I +E+ + + G Sbjct: 224 LINVSKVLRLTPLAHLTKIVLPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPG 277 Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 LG ++ + + G S +++ VL + L+R + Sbjct: 278 LGKFVWDEFQNGSSESLARIMVAVLTIGVIGFVLDRLM 315 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + ++ I+ + L S+ + P++ + + + L +L + LY Sbjct: 124 SLYTVMVGFFIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 183 Query: 128 PGKVIG---AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + F + +W + + NI +DL VS+ RL+ + Sbjct: 184 VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPLAHLTKIV 243 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 244 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 297 Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266 + A+LT+ + F+ D+L+ + + W Sbjct: 298 MVAVLTIGVIGFVLDRLMLSIQRAVSW 324 >gi|323493097|ref|ZP_08098229.1| nitrate ABC transporter permease protein [Vibrio brasiliensis LMG 20546] gi|323312658|gb|EGA65790.1| nitrate ABC transporter permease protein [Vibrio brasiliensis LMG 20546] Length = 322 Score = 167 bits (422), Expect = 7e-39, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A+ I IP+GI +G P QLL Sbjct: 97 VKIRPYTGKPTFFDQIVTSLITVASGFLLATAIAIPLGIVLGLNQGAYQAFNPIIQLLKP 156 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + L + + W L N G ++ D Sbjct: 157 VSPLAWLPIVTMVVSATYVSDDPLFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLI 216 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 217 NVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 270 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 271 KFVWDEFQNGSSASLGRIMVAVIAIGFIGLLLDRGMLQ 308 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 85/205 (41%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + S +++ + ++ PI+ +++ + L +L + Y Sbjct: 115 SLITVASGFLLATAIAIPLGIVLGLNQGAYQAFNPIIQLLKPVSPLAWLPIVTMVVSATY 174 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 175 VSDDPLFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIV 234 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 235 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 288 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++ + + L D+ + + + W Sbjct: 289 MVAVIAIGFIGLLLDRGMLQ-LQKW 312 >gi|254506550|ref|ZP_05118691.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Vibrio parahaemolyticus 16] gi|219550423|gb|EED27407.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Vibrio parahaemolyticus 16] Length = 289 Score = 166 bits (421), Expect = 8e-39, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A++I IP+GI +G + P QLL Sbjct: 64 VKIRPYTGKPTFFDQIITSLITVASGFLLATVIAIPLGIILGLNQGVYQAFNPVIQLLKP 123 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + + L + + W L N G ++ D Sbjct: 124 VSPLAWLPIVTMVVSAIYVSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLI 183 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W+ R I+LP P TG + G AW I +E+ + + GLG Sbjct: 184 NVSKVLQLSWWQHIRVIVLPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 237 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLWH 575 ++ + + G S +++ V+ + L L+R + Sbjct: 238 KFVWDEFQNGSSASLGRIMVAVIAIGFIGLLLDRGMLQ 275 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 88/205 (42%), Gaps = 13/205 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + S +++ + + ++ + P++ +++ + L +L + +Y Sbjct: 82 SLITVASGFLLATVIAIPLGIILGLNQGVYQAFNPVIQLLKPVSPLAWLPIVTMVVSAIY 141 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + ++ +DL VS+ +LS WQ + Sbjct: 142 VSDDPMFAKSFVNSLLTVALCSLWPTLINTAVGVTSVDKDLINVSKVLQLSWWQHIRVIV 201 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 202 LPSAIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSASLGRI 255 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 + A++ + + L D+ + + + W Sbjct: 256 MVAVIAIGFIGLLLDRGMLQ-LQKW 279 >gi|114320857|ref|YP_742540.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114227251|gb|ABI57050.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 311 Score = 166 bits (421), Expect = 8e-39, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 92/228 (40%), Gaps = 16/228 (7%) Query: 356 AIGIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 +G WQ + + Y + + + W ++ RV+ +A ++ IPVG+ +G Sbjct: 89 TVGETWQRAVTLFSDPFYDYGPNDMGIGWQVTYSLGRVLGGFFLALLVGIPVGLMMGTSE 148 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 P Q+L + P+ + + ++ + W I+ N AG Sbjct: 149 VCRRAWGPLIQILRPVSPLAWLPIGLLLFRAVDPS----AIFVIFITSIWPIILNTSAGV 204 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 A P D+ V+ + R I+LP P+ +TG + G AW + +E+ + G Sbjct: 205 QAIPRDYMNVSRVLQLNRLEITRKILLPAALPHMLTGMRLSLGIAWMVIVAAEMLTGG-- 262 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---FLWHPL 577 G+G ++ + + +++ +L++ +AL+ + L Sbjct: 263 ----IGIGFFVWDEWNNLNVASILVAILVIGLVGIALDTVMNLVQRRL 306 Score = 154 bits (390), Expect = 4e-35, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + + R+L ++LL + S P++ I++ + L +L Sbjct: 114 GIGWQVTYSLGRVLGGFFLALLVGIPVGLMMGTSEVCRRAWGPLIQILRPVSPLAWLPIG 173 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F + P +AIF IF + +W + + + IPRD VSR +L+ + Sbjct: 174 LLLFRAVDP--------SAIFVIFITSIWPIILNTSAGVQAIPRDYMNVSRVLQLNRLEI 225 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P ++P ++ M +S+ W +VA+EM+ G GIG ++ ++ Sbjct: 226 TRKILLPAALPHMLTGMRLSLGIAWMVIVAAEMLTGGI------GIGFFVWDEWNNLNVA 279 Query: 240 AILYAMLTMLGVIFLYDQLL 259 +IL A+L + V D ++ Sbjct: 280 SILVAILVIGLVGIALDTVM 299 >gi|307130415|ref|YP_003882431.1| alkanesulfonates transport system permease [Dickeya dadantii 3937] gi|306527944|gb|ADM97874.1| Alkanesulfonates transport system permease protein [Dickeya dadantii 3937] Length = 528 Score = 166 bits (421), Expect = 8e-39, Method: Composition-based stats. Identities = 70/528 (13%), Positives = 162/528 (30%), Gaps = 73/528 (13%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 L + R+ + + L SR L + +P+ +++ IP L ++ Sbjct: 68 PQELAPQLWVSLARLAIGLAGGIALGLTLGVLFGLSRTLDRLGMPLFNVLAQIPTLAWIP 127 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 ++ E + + + +T + P+ L E++R+ RL Sbjct: 128 LLMLALGIG--------EALKLVVLIKAVTVPVTLCTCAGIRQTPQTLYEMARTLRLPWL 179 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + L +P +P ++ ++ S GW ++A E++ + G+G + + + Sbjct: 180 TRLRRLVIPAMLPYVMTGARLAFSQGWVSLIAVELLASSE------GLGYLMVQSRQLFM 233 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297 L + +L + +Q L R W F V Sbjct: 234 LDLVFVCILAIGAFGLAGEQALQRLERRWI--FWPAPVLSHESPTPRV-----------A 280 Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + L + +L + F ++ + ++ G++ Sbjct: 281 WHALAGWILPALLCLLWQLATDRQWVHTAFLPAPREVVT-------------ALLAGLSS 327 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G ++ ++ R + + + + +G +G Sbjct: 328 GELTSALS-------------------ASLSRTLAGFALGAALGYLLGGLLGRHRVADRL 368 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P L + + PL+ + + + + L G P Sbjct: 369 LTPLLSALRSIALFAWLPLLTAWFGLE----ESAKVVFIALAAFFPALLASYQGVRHLPP 424 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 E A ++ + R++ LP + P +G + AW +I +E Sbjct: 425 SLLETARVLRLSARQRLRWLTLPAMLPALFSGLRLSLMHAWVGTIGAEYF-----IASGN 479 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 G+G+ + + + V+ GV+++ R + R L Sbjct: 480 GIGSMMIRAQQLFQSERVIAGVVLIALVSTLFYRLI-----TLAERRL 522 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 16/231 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 PR++V + L L S + R L+ + ++ L + R +L Sbjct: 311 LPAPREVVTALLAGLSSGELTSALSASLSRTLAGFALGAALGYLLGGLLGRHRVADRLLT 370 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+L ++SI + +L +F KV+ LAA F + YQ + ++ Sbjct: 371 PLLSALRSIALFAWLPLLTAWFGLEESAKVVFIALAAFFPALLAS--------YQGVRHL 422 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L E +R RLS Q+ +L +P +P L + +S+ W + +E + Sbjct: 423 PPSLLETARVLRLSARQRLRWLTLPAMLPALFSGLRLSLMHAWVGTIGAEYFIASGN--- 479 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 GIGS + A + ++ ++ + V L+ +L+ R + W + Sbjct: 480 --GIGSMMIRAQQLFQSERVIAGVVLIALVSTLFYRLITLAERRLTAWRFR 528 >gi|90021910|ref|YP_527737.1| 2-isopropylmalate synthase [Saccharophagus degradans 2-40] gi|89951510|gb|ABD81525.1| binding-protein-dependent transport systems inner membrane component [Saccharophagus degradans 2-40] Length = 337 Score = 166 bits (421), Expect = 9e-39, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 19/226 (8%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 Y + ++ V + ++A+I+ +P+GI+ G P +SS P QL Sbjct: 118 DYTGAPTYLDQIVTSIKTVFMGFLLATIVAVPLGIFCGLSPTVSSAFNPIIQLFKPVSPL 177 Query: 432 VFFPLVVSCVSYYHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 + P+V VS ++ + L ++ + + W L N G ++ D V Sbjct: 178 AWLPIVTMIVSATYVTSDDSWFTKSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVG 237 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + + ++LP P TG + G W I +E+ S + GLG ++ Sbjct: 238 KVLQLGWFTKITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLS------QNPGLGKFV 291 Query: 544 AESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 + + G S ++++ VL + L+R ++ L+ +G + Sbjct: 292 WDEFQNGSSNSLSKIMVAVLTIGVIGFLLDRVMFTLQNLFTFGEKR 337 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 80/196 (40%), Gaps = 13/196 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK- 130 + +++ + S + PI+ + + + L +L + Y Sbjct: 136 VFMGFLLATIVAVPLGIFCGLSPTVSSAFNPIIQLFKPVSPLAWLPIVTMIVSATYVTSD 195 Query: 131 ---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + L + + +W + + +I +DL V + +L + K L +P Sbjct: 196 DSWFTKSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVGKVLQLGWFTKITKLVLPS 255 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYA 244 S+P + + +S+ GW ++A+EM+ PG+G ++ + L I+ A Sbjct: 256 SLPLIFTGLRLSLGVGWMVLIAAEMLS------QNPGLGKFVWDEFQNGSSNSLSKIMVA 309 Query: 245 MLTMLGVIFLYDQLLF 260 +LT+ + FL D+++F Sbjct: 310 VLTIGVIGFLLDRVMF 325 >gi|282898754|ref|ZP_06306741.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] gi|281196281|gb|EFA71191.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] Length = 283 Score = 166 bits (421), Expect = 9e-39, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 25/259 (9%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINIL--------LHGIQETTVPRDIVDIVPITLDVHSL 61 F+ ++ P + L+ F+++ ++ + L ET P I L Sbjct: 24 FLVHKVLPPLCGLVIFLMLWQLLCSIPGFQLPGPLETFVETWDPFIIKPFFDNGDSDKGL 83 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + R+ ++ + L +R L + PI ++++IP L +L ++ Sbjct: 84 GWQILTSLGRVGLGFSLATIVGVFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLPISLA 143 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F P +AIF IF + +W + + + NIP+D V+R RL + F Sbjct: 144 AFQQANP--------SAIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQVKYFL 195 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDL 238 + P ++P + + + + W +VA+EM+V G GIGS+I A + +L Sbjct: 196 KIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGSFIWDAYNTTTDTNL 249 Query: 239 LAILYAMLTMLGVIFLYDQ 257 I+ A++ + V + D+ Sbjct: 250 SEIIIALIYVGIVGLMLDR 268 Score = 163 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 13/198 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I+ + +GI IG + + + P Q+L P + P+ + Sbjct: 83 LGWQILTSLGRVGLGFSLATIVGVFLGILIGANRFLYNAVDPIFQVLRTIPPLAWLPISL 142 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N ++ + W IL N G P D+ VA + +++ I+ Sbjct: 143 AAFQ----QANPSAIFVIFITSIWPILINTTVGVQNIPQDYVNVARVLRLRQVKYFLKIV 198 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES---TEKGSFPEV 555 P PY TG G +W A + +E+ G G+G++I ++ T + E+ Sbjct: 199 FPATVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGSFIWDAYNTTTDTNLSEI 252 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ ++ + L L+R + Sbjct: 253 IIALIYVGIVGLMLDRTV 270 >gi|119477165|ref|ZP_01617401.1| possible nitrate transport system permease protein [marine gamma proteobacterium HTCC2143] gi|119449528|gb|EAW30766.1| possible nitrate transport system permease protein [marine gamma proteobacterium HTCC2143] Length = 276 Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 11/218 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + AW+ + D I L +++RV+ + A+++ IP+G IG P + Sbjct: 59 VLAHAWKELSNPFYDAGPNDKGIGIQL-AYSLYRVITGFVAAALVAIPLGFVIGMSPLMH 117 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + ++ + W +L N G + Sbjct: 118 RALNPFIQVLRPISPLAWMPLALFVIR----DSEQSAIFVIFICSIWPMLINTAFGVANV 173 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 +D+ VA + ++ + +ILP P +TG + G AW + +E+ G Sbjct: 174 RSDWVNVARTHELSQLQTAFQVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 228 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 TG+G Y+ V+ +L++ + L+ L Sbjct: 229 -TGIGYYVWNEWNNLDLNSVIFSILMIGIIGMLLDMAL 265 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 19/226 (8%) Query: 34 ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS 93 +L H +E + P + + + + R+++ V + L + S Sbjct: 59 VLAHAWKELSNPFYDAGPNDKGIGIQ-----LAYSLYRVITGFVAAALVAIPLGFVIGMS 113 Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 + L P + +++ I L ++ + + +E +AIF IF +W M + Sbjct: 114 PLMHRALNPFIQVLRPISPLAWMPLALFVIRD--------SEQSAIFVIFICSIWPMLIN 165 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 + N+ D V+R+ LS Q + + +P + P ++ M +S+ W +VA+EM+ Sbjct: 166 TAFGVANVRSDWVNVARTHELSQLQTAFQVILPAAAPTILTGMRISIGIAWLVIVAAEML 225 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 V G GIG Y+ DL ++++++L + + L D L Sbjct: 226 VGGT------GIGYYVWNEWNNLDLNSVIFSILMIGIIGMLLDMAL 265 >gi|307823608|ref|ZP_07653837.1| binding-protein-dependent transport systems inner membrane component [Methylobacter tundripaludum SV96] gi|307735593|gb|EFO06441.1| binding-protein-dependent transport systems inner membrane component [Methylobacter tundripaludum SV96] Length = 338 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 17/201 (8%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ V +IA++I +P+G++ G P +S I P Q+ + P+V VS Sbjct: 131 FTSLYTVFAGFVIATLIAVPLGLFCGMSPIFNSAINPLVQIFKPVSPLAWLPIVTLVVSA 190 Query: 444 YHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 ++ + L ++ + + W L N G S+ D V ++ + Sbjct: 191 VYVTTDDSWFEKSFLTSAITVTLCSLWPTLINTAVGVSSIDKDLINVGKVLRLSWSTQIK 250 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SF 552 IILP PY TG + G W I +E+ + + GLG ++ + + G S Sbjct: 251 KIILPSALPYIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSL 304 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 +++ V + AL+R + Sbjct: 305 GRIMVAVFTIGLIGFALDRIM 325 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 80/199 (40%), Gaps = 13/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + VI+ L S + P++ I + + L +L + +Y Sbjct: 133 SLYTVFAGFVIATLIAVPLGLFCGMSPIFNSAINPLVQIFKPVSPLAWLPIVTLVVSAVY 192 Query: 128 ----PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + L + + +W + + +I +DL V + RLS + + Sbjct: 193 VTTDDSWFEKSFLTSAITVTLCSLWPTLINTAVGVSSIDKDLINVGKVLRLSWSTQIKKI 252 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLA 240 +P ++P + M +S+ GW ++A+EM+ PG+G ++ + L Sbjct: 253 ILPSALPYIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGR 306 Query: 241 ILYAMLTMLGVIFLYDQLL 259 I+ A+ T+ + F D+++ Sbjct: 307 IMVAVFTIGLIGFALDRIM 325 >gi|146284405|ref|YP_001174558.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri A1501] gi|145572610|gb|ABP81716.1| nitrate ABC transporter permease protein [Pseudomonas stutzeri A1501] Length = 263 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 I W+ I DV + W ++ RV V ++A + + +G+ IG Sbjct: 43 VIAETWELIVDPFYDNGGNDVG-LAWQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAM 101 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P Q+L P + PL ++ H + ++ W I+ N G Sbjct: 102 RGLDPIFQVLRTVPPLAWLPLSLAGFQDSHPS----ALFVIFITAIWPIIINTAVGIRNI 157 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D++ VA + G+ +++ I+LP PY TG G +W A I +E+ G Sbjct: 158 PQDYRNVAQVLQLNGFEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGG----- 212 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ +++L ++ + L+R + Sbjct: 213 -VGIGFFIWDAWNASRISDIILALVYIGVVGFVLDRLV 249 Score = 159 bits (403), Expect = 9e-37, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 96/200 (48%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ +++++ L +S L PI +++++P L +L + Sbjct: 64 GLAWQLLASLERVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPLS 123 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + +P +A+F IF + +W + + + NIP+D V++ +L+G++ Sbjct: 124 LAGFQDSHP--------SALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEY 175 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P + P + + + + W ++A+EM++ G GIG +I A + Sbjct: 176 FKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV------GIGFFIWDAWNASRIS 229 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V F+ D+L+ Sbjct: 230 DIILALVYIGVVGFVLDRLV 249 >gi|241554242|ref|YP_002979455.1| nitrate ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863548|gb|ACS61210.1| nitrate ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 297 Score = 165 bits (419), Expect = 2e-38, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ I Y ++ QD+ + W I++ RV+ +A++ + +G IG + Sbjct: 81 SYDLIAYPFFNYGSQDIG-LGWRVLISLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLD 139 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL ++ + N ++ + W ++ N G P D+ Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + + ++ I+LP PY TG G +W A + +E+ + G G+ Sbjct: 196 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ P++++ + + AL++ + Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+L ++ + + + +S L PI +++++P L +L + Sbjct: 98 GLGWRVLISLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V+ RL+ ++ Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 209 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + V F D+L+ Sbjct: 264 DIIVALAYIGIVGFALDKLV 283 >gi|109898731|ref|YP_661986.1| binding-protein-dependent transport systems inner membrane component [Pseudoalteromonas atlantica T6c] gi|109701012|gb|ABG40932.1| binding-protein-dependent transport systems inner membrane component [Pseudoalteromonas atlantica T6c] Length = 329 Score = 165 bits (419), Expect = 2e-38, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 16/219 (7%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 Y + +++ V V +IAS+I +P+GI G + I P QL Sbjct: 101 SYSPTIRAFTGAPTFFDQIWTSLYTVTVGFLIASVIAVPLGILCGLSKASYAAINPLIQL 160 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPN 477 L + PLV VS +++ + + ++ + W L N G S+ + Sbjct: 161 LKPVSPLAWLPLVTMVVSAVYISDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDS 220 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 D V+ + + I++P P TG + G W I +E+ + + Sbjct: 221 DLINVSKVLRLGPFSHVMKIVMPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNP 274 Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 GLG ++ + + G S +++ VL + AL+R + Sbjct: 275 GLGKFVWDEFQNGSSESLARIMVAVLTIGLIGFALDRLM 313 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +I+ + L S+ + P++ +++ + L +L + +Y Sbjct: 122 SLYTVTVGFLIASVIAVPLGILCGLSKASYAAINPLIQLLKPVSPLAWLPLVTMVVSAVY 181 Query: 128 PG---KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + + +W + + +I DL VS+ RL + + Sbjct: 182 ISDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLINVSKVLRLGPFSHVMKIV 241 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 242 MPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 295 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+LT+ + F D+L+ Sbjct: 296 MVAVLTIGLIGFALDRLML 314 >gi|192362345|ref|YP_001981051.1| nitrate ABC transporter permease [Cellvibrio japonicus Ueda107] gi|190688510|gb|ACE86188.1| nitrate ABC transporter permease protein [Cellvibrio japonicus Ueda107] Length = 291 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 10/193 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 W ++ RV V +A I + +GI +G + P Q+L P + PL ++ Sbjct: 95 WQILASLKRVAVGYTLAVIAGVALGILVGQSLWAMRGLDPIFQVLRTVPPLAWLPLSLAG 154 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 H + ++ + W I+ N G P D++ VA + GW+++ I+LP Sbjct: 155 FQDSHPS----AIFVIFITSIWPIIINTSVGVRNIPMDYRNVARVIQLPGWQYFYKIMLP 210 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 PY +G G +W A + +E+ G G+G +I ++ +++L ++ Sbjct: 211 AAAPYIFSGLRIGVGLSWLAIVAAEMLVGG------VGIGFFIWDAWNSSRISDIILALI 264 Query: 561 IMCCFVLALNRFL 573 + AL+R + Sbjct: 265 YVGLVGFALDRLV 277 Score = 164 bits (415), Expect = 5e-38, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++++ L +S L PI +++++P L +L + Sbjct: 92 GMGWQILASLKRVAVGYTLAVIAGVALGILVGQSLWAMRGLDPIFQVLRTVPPLAWLPLS 151 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + +P +AIF IF + +W + + + NIP D V+R +L GWQ Sbjct: 152 LAGFQDSHP--------SAIFVIFITSIWPIIINTSVGVRNIPMDYRNVARVIQLPGWQY 203 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F+ + +P + P + + + + W +VA+EM+V G GIG +I A + Sbjct: 204 FYKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLVGGV------GIGFFIWDAWNSSRIS 257 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V F D+L+ Sbjct: 258 DIILALIYVGLVGFALDRLV 277 >gi|254426861|ref|ZP_05040568.1| ABC transporter, permease protein [Alcanivorax sp. DG881] gi|196193030|gb|EDX87989.1| ABC transporter, permease protein [Alcanivorax sp. DG881] Length = 333 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 16/214 (7%) Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 H Y ++ V+ ++AS+I IP+GI+IG + + P QL Sbjct: 110 HRDYTGAPTFFDQIGTSLITVMSGFLLASVIAIPLGIFIGLSNTAHAAMNPLIQLFKPVS 169 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + PLV VS ++ + ++ + W L N G ++ D V Sbjct: 170 PLAWLPLVTMVVSAVYVTDDPLVAKSFLTSMFTVTLCCLWPTLMNTAVGVTSVSQDLTNV 229 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + + R I+LP P TG + G AW I +E+ + + GLG + Sbjct: 230 SKVLRLNALSHVRKIVLPSALPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKF 283 Query: 543 IAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + + + G S +++ V+++ L+R + Sbjct: 284 VWDEFQNGSSQSLGRIMVAVIVIGLIGFLLDRLM 317 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 86/199 (43%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + ++S +++ + S + P++ + + + L +L + +Y Sbjct: 126 SLITVMSGFLLASVIAIPLGIFIGLSNTAHAAMNPLIQLFKPVSPLAWLPLVTMVVSAVY 185 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 V + L ++F + +W + + ++ +DL VS+ RL+ + Sbjct: 186 VTDDPLVAKSFLTSMFTVTLCCLWPTLMNTAVGVTSVSQDLTNVSKVLRLNALSHVRKIV 245 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + Q L I Sbjct: 246 LPSALPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLGRI 299 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A++ + + FL D+L+ Sbjct: 300 MVAVIVIGLIGFLLDRLML 318 >gi|89092993|ref|ZP_01165944.1| putative nitrate transporter [Oceanospirillum sp. MED92] gi|89082643|gb|EAR61864.1| putative nitrate transporter [Oceanospirillum sp. MED92] Length = 328 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + Y ++ V+ ++AS+I IP GI IG + S P QL Sbjct: 103 IKVRPYTGKPTFFDQIGTSLITVLAGFVLASLIAIPAGIMIGLNQTLYSAFNPLIQLFKP 162 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS +++ + + + + W L N G S D + Sbjct: 163 VSPLAWLPLVTMVVSAVYVSKDPMFAKSFITSLITVSLCCLWPTLLNTAVGVSGISKDLQ 222 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ I+LP P TG + G AW I +E+ + + GLG Sbjct: 223 NVSQVLRLSWLAHVTKIVLPSSIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 276 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S +++ VL++ L+R + Sbjct: 277 KFVWDEFQNGSSSSLGRIMVAVLVIGLIGFLLDRVM 312 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 86/199 (43%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +L+ V++ L + ++ L P++ + + + L +L + +Y Sbjct: 121 SLITVLAGFVLASLIAIPAGIMIGLNQTLYSAFNPLIQLFKPVSPLAWLPLVTMVVSAVY 180 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 K + + ++ + +W + + I +DL+ VS+ RLS + Sbjct: 181 VSKDPMFAKSFITSLITVSLCCLWPTLLNTAVGVSGISKDLQNVSQVLRLSWLAHVTKIV 240 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 241 LPSSIPMIFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLGRI 294 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+L + + FL D+++ Sbjct: 295 MVAVLVIGLIGFLLDRVML 313 >gi|124268670|ref|YP_001022674.1| nitrate ABC transporter permease [Methylibium petroleiphilum PM1] gi|124261445|gb|ABM96439.1| nitrate ABC transporter permease protein [Methylibium petroleiphilum PM1] Length = 295 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 10/197 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + ++ RV + +A+++ IP+G IG P + + PF Q+L + PL + Sbjct: 100 IGLQLAYSLGRVGLGFALAALVAIPLGFLIGMSPLVYRALDPFIQVLKPISPLAWMPLAL 159 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ ++ + W +L N G + ++ VA + ++ R +I Sbjct: 160 YTIK----DSSISGIFVIFICSVWPMLINTAFGVAGVRREWLNVARTLEVSPLRKAFEVI 215 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG + G AW + +E+ G TG+G ++ S V+ Sbjct: 216 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSLTNVIFA 269 Query: 559 VLIMCCFVLALNRFLWH 575 +L++ + L+ Sbjct: 270 ILVIGVVGMLLDLLFAR 286 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ ++ L L S + L P + +++ I L ++ + Sbjct: 104 LAYSLGRVGLGFALAALVAIPLGFLIGMSPLVYRALDPFIQVLKPISPLAWMPLALY--- 160 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ IF IF VW M + + + R+ V+R+ +S +K + + Sbjct: 161 -----TIKDSSISGIFVIFICSVWPMLINTAFGVAGVRREWLNVARTLEVSPLRKAFEVI 215 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA+EM+V G GIG ++ L +++A Sbjct: 216 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVIFA 269 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + V L D L R Sbjct: 270 ILVIGVVGMLLDLLFAR 286 >gi|159185941|ref|NP_356730.2| ABC transporter, membrane spanning protein (nitrate) [Agrobacterium tumefaciens str. C58] gi|159141075|gb|AAK89515.2| ABC transporter, membrane spanning protein (nitrate) [Agrobacterium tumefaciens str. C58] Length = 297 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + +++ RV +A+I I +G IG + P Q+L P + Sbjct: 94 SQDIGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAW 153 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL ++ + N ++ + W ++ N G P D++ VA + + Sbjct: 154 LPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEF 209 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I+LP PY TG G +W A + +E+ + G G+G +I ++ P Sbjct: 210 FFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLP 263 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++++ + + L++ + Sbjct: 264 DIIVALAYIGVVGFMLDKLV 283 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + + + +S L PI +++++P L +L + Sbjct: 98 GLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V++ RL+ + Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEF 209 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F+ + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 210 FFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + V F+ D+L+ Sbjct: 264 DIIVALAYIGVVGFMLDKLV 283 >gi|190895012|ref|YP_001985305.1| nitrate ABC transporter permease [Rhizobium etli CIAT 652] gi|190700673|gb|ACE94755.1| nitrate ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|327194336|gb|EGE61196.1| nitrate ABC transporter permease [Rhizobium etli CNPAF512] Length = 297 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ I + ++ QD+ + W +++ RV +A++ + VG IG + Sbjct: 81 SYDLIAFPFFNYGSQDIG-LGWRVLVSLQRVAYGFGLAAVAGVIVGAIIGQSVWAMRGLD 139 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL ++ + N ++ + W ++ N G P D+ Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + ++ I+LP PY TG G +W A + +E+ + G G+ Sbjct: 196 RNVAEVLRLNQLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ P++++ + + AL++ + Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFALDKLV 283 Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + + + +S L PI +++++P L +L + Sbjct: 98 GLGWRVLVSLQRVAYGFGLAAVAGVIVGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V+ RL+ + Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQLEF 209 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + V F D+L+ Sbjct: 264 DIIVALAYIGIVGFALDKLV 283 >gi|307153749|ref|YP_003889133.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306983977|gb|ADN15858.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 280 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+++ I VG+ IG P + + P Q+L P + P+ + Sbjct: 83 LFWQILASLQRVGIGFSLAALVGISVGVLIGASPLMYDALDPIFQVLRTIPPLAWLPISL 142 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W I+ N G P D++ V+ ++ ++ I+ Sbjct: 143 AAFR----QSDPSAIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKIEYFFNIL 198 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG G +W A + +E+ G G+G +I ++ +++L Sbjct: 199 IPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGFFIWDAYNSSRLGQIILA 252 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L+R + Sbjct: 253 LIYVGVVGLLLDRMV 267 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 22/257 (8%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINI--------LLHGIQETTVPRDIVDIVPITLDVHSLP 62 R+I I L F+ + I+ L ++ET P I L Sbjct: 25 SPRKIIAPIIALGIFLTIWQILCSGENPNLPSPLTVLKETWNPLIINPFYDNGGTDKGLF 84 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L L S + L PI ++++IP L +L ++ Sbjct: 85 WQILASLQRVGIGFSLAALVGISVGVLIGASPLMYDALDPIFQVLRTIPPLAWLPISLAA 144 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P +AIF IF + +W + + + IP+D VSR +LS + F+ Sbjct: 145 FRQSDP--------SAIFVIFITAIWPIIINTTVGVQQIPQDYRNVSRVLQLSKIEYFFN 196 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P + + + + W +VA+EM+V G GIG +I A L I+ Sbjct: 197 ILIPSAVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGFFIWDAYNSSRLGQII 250 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + V L D+++ Sbjct: 251 LALIYVGVVGLLLDRMV 267 >gi|307131761|ref|YP_003883777.1| Nitrate ABC transporter permease [Dickeya dadantii 3937] gi|306529290|gb|ADM99220.1| Nitrate ABC transporter, permease protein [Dickeya dadantii 3937] Length = 325 Score = 165 bits (417), Expect = 3e-38, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 98/282 (34%), Gaps = 21/282 (7%) Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355 R + + P + V + R + Q S + I V Sbjct: 35 RAVATDATVIALPETAGVAAPTPAAVLPRAVWRPRLSQWLSRLLPGGVGMILLLAVWQVA 94 Query: 356 AI--------GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 A+ W + I Y + + W ++ RV + +A+++ IP Sbjct: 95 ALSSKGFPTPWQTWLAAQSIFADPFYVAGPNDQGIGWNVLASLERVGIGFGLAALVGIPA 154 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 G IG +++ P LL + P+ + + + + W + Sbjct: 155 GFLIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPM 210 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + N G P D+ VA ++ + R I+LP + P +TG + G AW + + Sbjct: 211 ILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIVAA 270 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 E+ + G G+G +I + P +++ +L++ Sbjct: 271 EMLTGG------IGIGFWIWNEWNNLNVPNIIIAILVIGVVG 306 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 99/245 (40%), Gaps = 20/245 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI---QETTVPRDIVDIVPITL---DVHSLPQYASR 67 R+ P ++ + V + + G +T + + P + + + Sbjct: 76 RLLPGGVGMILLLAVWQVAALSSKGFPTPWQTWLAAQSIFADPFYVAGPNDQGIGWNVLA 135 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ ++ L L + R + + PI+ +++ + L +L ++ F Sbjct: 136 SLERVGIGFGLAALVGIPAGFLIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAE 195 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P A+ + IF +W M + + + IP+D V+R +LS + + +P Sbjct: 196 P--------ASSWTIFICSIWPMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPA 247 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG +I ++ I+ A+L Sbjct: 248 VLPSVLTGVRLSIGIAWLVIVAAEMLTGGI------GIGFWIWNEWNNLNVPNIIIAILV 301 Query: 248 MLGVI 252 + V Sbjct: 302 IGVVG 306 >gi|159044213|ref|YP_001533007.1| putative ABC transporter permease [Dinoroseobacter shibae DFL 12] gi|157911973|gb|ABV93406.1| putative ABC transporter permease protein [Dinoroseobacter shibae DFL 12] Length = 360 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 86/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A+++ +P+GI G ++ + P Q+ Sbjct: 138 VKDIAYTGAPSYYDQIWTSIQTVFFGFLVATVVAVPLGISAGLSVTANAALNPIIQIFKP 197 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS + + L ++ + + W L N G S+ D Sbjct: 198 VSPLAWLPIVTMVVSAVYTTNDGLFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLV 257 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + + ++LP P TG + G W I +E+ + + GLG Sbjct: 258 NVSKVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S +++ VL + L+R ++ L+ + Sbjct: 312 KFVWDEFQNGSSDSLARIMVAVLTIGIIGFLLDRLMFTIQSLFTFTNNR 360 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +++ + A S L PI+ I + + L +L + +Y Sbjct: 156 SIQTVFFGFLVATVVAVPLGISAGLSVTANAALNPIIQIFKPVSPLAWLPIVTMVVSAVY 215 Query: 128 P---GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G + L + + +W + + +I +DL VS+ +++ + K L Sbjct: 216 TTNDGLFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVNVSKVLKMNTYTKITKLV 275 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 276 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARI 329 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+LT+ + FL D+L+F Sbjct: 330 MVAVLTIGIIGFLLDRLMF 348 >gi|209526508|ref|ZP_03275034.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] gi|209493014|gb|EDZ93343.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] Length = 410 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 23/256 (8%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQ 63 +++ P+ +L F++V + + + R + + + +D L Sbjct: 159 GKKLIPSAVAILIFLVVWEVFTAVSDSTLPGPI-RTVSETWELIIDPFFDHGGIDKGLFW 217 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + R+ ++++ L + + L PI I+++IP L +L ++ F Sbjct: 218 QILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISLAGF 277 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 P +AIF IF + +W + + + + IP+D VSR RL F+ + Sbjct: 278 ERANP--------SAIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKI 329 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 P ++P + + + + W ++A+EM++ G GIG +I A + I+ Sbjct: 330 LFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSRMSDIIL 383 Query: 244 AMLTMLGVIFLYDQLL 259 A++ + V L D+ + Sbjct: 384 AVIYVGVVGLLLDKFI 399 Score = 163 bits (414), Expect = 6e-38, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 112/306 (36%), Gaps = 25/306 (8%) Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR--V 340 S ++ L + Y FSP R +F + + + + Sbjct: 104 SAIVALSGNSRINVASMYQFPVPFSPHEPMTSPTYRRRHKFQFSPQRWLKAVLNKGKKLI 163 Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-------------IWLGCITM 387 + I F VV V ++ ++ + + L + W ++ Sbjct: 164 PSAVAILIFLVVWEVFTAVSDSTLPGPIRTVSETWELIIDPFFDHGGIDKGLFWQILTSL 223 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 RV + +A ++ + +G+ IG + + P Q+L P + P +S + N Sbjct: 224 QRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLP--ISLAGFERAN 281 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 P+ ++ W I+ N G P D+ V+ + ++ I+ P PY Sbjct: 282 PS--AIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKILFPATVPYIF 339 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG G +W A I +E+ G G+G +I ++ +++L V+ + L Sbjct: 340 TGLKIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSRMSDIILAVIYVGVVGL 393 Query: 568 ALNRFL 573 L++F+ Sbjct: 394 LLDKFI 399 >gi|209546549|ref|YP_002278467.1| nitrate ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537793|gb|ACI57727.1| nitrate ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 297 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 92/214 (42%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ I Y + QD+ + W +++ RV+ +A++ + +G IG + Sbjct: 81 SYDLIAYPFFNNGSQDIG-LGWRVLVSLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLD 139 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL ++ + N ++ + W ++ N G P D+ Sbjct: 140 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + + ++ I+LP PY TG G +W A + +E+ + G G+ Sbjct: 196 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 249 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ P++++ + + L++ + Sbjct: 250 GFFIWDAWNSSRLPDIIVALAYIGIVGFVLDKLV 283 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+L ++ + + + +S L PI +++++P L +L + Sbjct: 98 GLGWRVLVSLQRVLYGFGLAAVTGVIIGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 157 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V+ RL+ ++ Sbjct: 158 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 209 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 210 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 263 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + V F+ D+L+ Sbjct: 264 DIIVALAYIGIVGFVLDKLV 283 >gi|75909859|ref|YP_324155.1| nitrate transport permease [Anabaena variabilis ATCC 29413] gi|75703584|gb|ABA23260.1| Nitrate transport permease [Anabaena variabilis ATCC 29413] Length = 273 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 WL ++ RVVV ++A++I IP+G I I P QLL + PL Sbjct: 78 FFWLILASLKRVVVGYLLATLIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQ 137 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + L PN ++ W I+ N G P D++ V+ ++ + I+ Sbjct: 138 AVF----LKPNPSAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLESFYKIL 193 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P+ TG A G +W A + +E+ L G+G +I ++ + E++L Sbjct: 194 LPATLPHIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILA 247 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L++ + Sbjct: 248 IVYLGAVGLVLDKIM 262 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 88/194 (45%), Gaps = 14/194 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R++ +++ L + + + + P++ +++ + L +L F+ Sbjct: 83 LASLKRVVVGYLLATLIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQAVFLK 142 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF I + +W + + + +P+D VS+ LS + F+ + + Sbjct: 143 PNP--------SAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLESFYKILL 194 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + + +++ W VVA+EM+ + GIG +I A ++ ++ A+ Sbjct: 195 PATLPHIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILAI 248 Query: 246 LTMLGVIFLYDQLL 259 + + V + D+++ Sbjct: 249 VYLGAVGLVLDKIM 262 >gi|90419876|ref|ZP_01227785.1| permease protein, ABC-type nitrate/sulfonate/bicarbonate transport system [Aurantimonas manganoxydans SI85-9A1] gi|90335917|gb|EAS49665.1| permease protein, ABC-type nitrate/sulfonate/bicarbonate transport system [Aurantimonas manganoxydans SI85-9A1] Length = 364 Score = 164 bits (416), Expect = 4e-38, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 85/216 (39%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V +Y ++ V + ++A+II IPVGI G I+ + P Q+ Sbjct: 142 VKTRSYTGAPTYPEQILTSLKTVFLGFVLATIIAIPVGIACGLSATINGALNPLIQIFKP 201 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS ++N + + ++ + + W L N G ++ D Sbjct: 202 VSPLAWLPIVTMIVSALYVNASDAVPKSMVVSAITVTLCSLWPTLINTALGVASIDKDLV 261 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V + + ++LP P TG + G W I +E+ + + GLG Sbjct: 262 NVGKVLQLPTHKTITKLVLPSAMPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 315 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S +++ V+ + L+R + Sbjct: 316 KFVWDEFQNGSSDSLARIIVAVITIGIVGFMLDRIM 351 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 84/204 (41%), Gaps = 12/204 (5%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 P+ + + V++ + S + L P++ I + + L +L + Sbjct: 154 PEQILTSLKTVFLGFVLATIIAIPVGIACGLSATINGALNPLIQIFKPVSPLAWLPIVTM 213 Query: 122 YFMNLYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 LY V + + + + +W + + +I +DL V + +L + Sbjct: 214 IVSALYVNASDAVPKSMVVSAITVTLCSLWPTLINTALGVASIDKDLVNVGKVLQLPTHK 273 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ-- 236 L +P +MP + + +S+ GW ++A+EM+ PG+G ++ + Sbjct: 274 TITKLVLPSAMPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSS 327 Query: 237 -DLLAILYAMLTMLGVIFLYDQLL 259 L I+ A++T+ V F+ D+++ Sbjct: 328 DSLARIIVAVITIGIVGFMLDRIM 351 >gi|291612628|ref|YP_003522785.1| binding-protein-dependent transport systems inner membrane component [Sideroxydans lithotrophicus ES-1] gi|291582740|gb|ADE10398.1| binding-protein-dependent transport systems inner membrane component [Sideroxydans lithotrophicus ES-1] Length = 333 Score = 164 bits (416), Expect = 4e-38, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 84/216 (38%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + Y + +++ V V + +II +P+GI G I + + P Q+ Sbjct: 110 FDEIKYTGQPTYLDQIFTSLYTVFVGFFLGTIIAVPLGILCGLNKTIQAALNPLIQIFRP 169 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + L ++ + + W L N G ++ D Sbjct: 170 VSPLAWLPIVTLVVSALYVSADPMFAKSFLISAITVTLCSMWPTLVNTALGVASIDKDLL 229 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ I++P TG + G AW I +E+ + + GLG Sbjct: 230 NVSKVLRLSTSTKVMKIVIPSSLKLIFTGMRLSLGVAWMVLIAAEMLA------QNPGLG 283 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S +++ V + L+R + Sbjct: 284 KFVWDEFQNGSSQSLERIMVAVFTIGFVGFLLDRTM 319 Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 13/223 (5%) Query: 41 ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100 + T P D + T L Q + + + + L ++ + L Sbjct: 102 QATNPGQQFDEIKYTGQPTYLDQ-IFTSLYTVFVGFFLGTIIAVPLGILCGLNKTIQAAL 160 Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 P++ I + + L +L + LY + L + + +W + Sbjct: 161 NPLIQIFRPVSPLAWLPIVTLVVSALYVSADPMFAKSFLISAITVTLCSMWPTLVNTALG 220 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +I +DL VS+ RLS K + +P S+ + M +S+ W ++A+EM+ Sbjct: 221 VASIDKDLLNVSKVLRLSTSTKVMKIVIPSSLKLIFTGMRLSLGVAWMVLIAAEMLA--- 277 Query: 218 TVIPLPGIGSYIALAIKE---QDLLAILYAMLTMLGVIFLYDQ 257 PG+G ++ + Q L I+ A+ T+ V FL D+ Sbjct: 278 ---QNPGLGKFVWDEFQNGSSQSLERIMVAVFTIGFVGFLLDR 317 >gi|116053906|ref|YP_788343.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|296386674|ref|ZP_06876173.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] gi|115589127|gb|ABJ15142.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 538 Score = 164 bits (416), Expect = 4e-38, Method: Composition-based stats. Identities = 76/538 (14%), Positives = 160/538 (29%), Gaps = 71/538 (13%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 + ++V L L + + R+ ++ + S R Sbjct: 56 WMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVASGAALGAWLGFSPRA 115 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 ++ P + IP L ++ +++F EL + + + V +T Sbjct: 116 ERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVLVKAVVVPVTIHTLV 167 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + + L E + RL W L +P ++P + + ++++ GW ++A E++ Sbjct: 168 GVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLASS 227 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 + GIG + + L + +L + V D+ + W ++ Sbjct: 228 E------GIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI-----QWLDR------- 269 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336 + G R P Q Sbjct: 270 ----------------------------------RLLHWPQAATGEFRRRPPGRGWQRLQ 295 Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLI 394 L + W + A + V T+ L G + ++ R + + Sbjct: 296 VWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKRTLGGL 355 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++ + G+ +G P L + PL+ + Sbjct: 356 LLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLTAWFGLG----EPAKLT 411 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + + +L G ++ P E A + WR ++LPG P G A Sbjct: 412 FVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLAL 471 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 AW +I +E G+G+ + + + + G+L++ LN Sbjct: 472 IYAWLGTIGAEYFMPSD-----GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNAL 524 Score = 101 bits (253), Expect = 3e-19, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 80/226 (35%), Gaps = 17/226 (7%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 W + WQS ++ + ++ I++ R+ ++ +G W Sbjct: 56 WMSAQVLPTPELVWQSARELLAGELWSEL-------AISLRRLAWGLLAGVASGAALGAW 108 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 +GF P + P LA P + PL + L + L ++ + Sbjct: 109 LGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIH 164 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G +E A+ + +ILP P ++TG A W + + E+ Sbjct: 165 TLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELL 224 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + G+G + + + V + +L++ + ++R + Sbjct: 225 A------SSEGIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI 264 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ SLP + R L +++ F+ L R Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFG 380 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P ++ + I ++ +F P K+ +AA F + + + + ++ Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFF--------PLLLATQRGIASL 432 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L E +R RL W++ L +P + P + + +++ W + +E + D Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSD---- 488 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + + I ML + L + L + + + ++R Sbjct: 489 -GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 536 >gi|126729376|ref|ZP_01745190.1| binding-protein-dependent transport systems inner membrane component [Sagittula stellata E-37] gi|126710366|gb|EBA09418.1| binding-protein-dependent transport systems inner membrane component [Sagittula stellata E-37] Length = 360 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 87/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V ++A+++ +P+GI G P ++ I P Q+ Sbjct: 138 VKDVAYTGAPSYYQQIWTSIQTVFFGFVLATLVAVPLGILAGLSPTANAAINPLVQIFKP 197 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS N + ++ + + W L N G ++ D Sbjct: 198 VSPLAWLPIVTMIVSAAAANDGGLFAKSFIISAVTVTLCSLWPTLINTSLGVASIDKDLV 257 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + W ++LP P TG + G W I +E+ + + GLG Sbjct: 258 NVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S ++++ V + L+R ++ L+ + + Sbjct: 312 KFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMYALQSLFTFTNQR 360 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 83/198 (41%), Gaps = 12/198 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + V++ L LA S + P++ I + + L +L + Sbjct: 156 SIQTVFFGFVLATLVAVPLGILAGLSPTANAAINPLVQIFKPVSPLAWLPIVTMIVSAAA 215 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G + + + + +W + + +I +DL VS+ +++ W K L Sbjct: 216 ANDGGLFAKSFIISAVTVTLCSLWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLV 275 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 276 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLAKI 329 Query: 242 LYAMLTMLGVIFLYDQLL 259 + A+ T+ + FL D+++ Sbjct: 330 MVAVFTIGIIGFLLDRVM 347 >gi|88798426|ref|ZP_01114011.1| nitrate transporter system, permease component [Reinekea sp. MED297] gi|88778866|gb|EAR10056.1| nitrate transporter system, permease component [Reinekea sp. MED297] Length = 328 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 16/218 (7%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y V + I ++ V+ ++AS I IP+GI IG + P Q+L Sbjct: 101 YEVRIRDFNGRPTFISQIGTSLITVLSGFLLASAIAIPLGILIGLNQFVYMAANPIIQVL 160 Query: 426 AAFPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPND 478 + PLV VS +++ + + + + + W L N G ++ +D Sbjct: 161 KPVSPLAWLPLVTIVVSAVYVSDDPMFEKSFVTSVITVTLCSLWPTLLNTAVGVASIESD 220 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 F ++ + R I+LP P TG + G AW I +E+ + + G Sbjct: 221 FNNISRVLKLKSLTHVRKIVLPASVPMIFTGLRLSIGIAWMVLIAAEMLA------QNPG 274 Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 LG ++ + + G S ++ VL++ L+R + Sbjct: 275 LGKFVWDEFQNGSSESLSRILAAVLVIGLVGFLLDRAM 312 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +LS +++ L ++ + M PI+ +++ + L +L + +Y Sbjct: 121 SLITVLSGFLLASAIAIPLGILIGLNQFVYMAANPIIQVLKPVSPLAWLPLVTIVVSAVY 180 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ + +W + + +I D +SR +L + Sbjct: 181 VSDDPMFEKSFVTSVITVTLCSLWPTLLNTAVGVASIESDFNNISRVLKLKSLTHVRKIV 240 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 241 LPASVPMIFTGLRLSIGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLSRI 294 Query: 242 LYAMLTMLGVIFLYDQLLF 260 L A+L + V FL D+ + Sbjct: 295 LAAVLVIGLVGFLLDRAML 313 >gi|75907249|ref|YP_321545.1| nitrate transport permease [Anabaena variabilis ATCC 29413] gi|75700974|gb|ABA20650.1| Nitrate transport permease [Anabaena variabilis ATCC 29413] Length = 279 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 10/214 (4%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W I Y D + W ++ RV + +A+++ + +G+ IG +S + Sbjct: 63 TWILILYPFYDKGGTDKG-LFWQILASLQRVAISYSLAAVVGVALGVLIGINKTMSKALD 121 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P QLL P + P+ ++ + ++ W IL N G + P D+ Sbjct: 122 PIFQLLRTVPPLAWVPISLAALR----QNEPAALFVIFITAIWPILINTAVGVTQIPQDY 177 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA ++ ++ I++P PY TG A G AW A I +E+ G + G+ Sbjct: 178 NNVAKVLQLSRKEYFTNILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GI 232 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ + + EV+L ++ + L L++ + Sbjct: 233 GFFIWDAYQNNNVSEVILALVYIGVVGLILDKLM 266 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 110/255 (43%), Gaps = 24/255 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---------DVHSLPQY 64 +FP ++ F+++ + + P ++ I + L Sbjct: 27 DLFPPAIAIVIFLVIWQLFSWTPGAT--LPGPVQVIQDTWILILYPFYDKGGTDKGLFWQ 84 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ + ++ + L ++ + L PI +++++P L ++ ++ Sbjct: 85 ILASLQRVAISYSLAAVVGVALGVLIGINKTMSKALDPIFQLLRTVPPLAWVPISLAALR 144 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 P AA+F IF + +W + + + IP+D V++ +LS + F + Sbjct: 145 QNEP--------AALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNIL 196 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + + +++ W ++A+E+++ G + GIG +I A + ++ ++ A Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNNVSEVILA 251 Query: 245 MLTMLGVIFLYDQLL 259 ++ + V + D+L+ Sbjct: 252 LVYIGVVGLILDKLM 266 >gi|254241178|ref|ZP_04934500.1| hypothetical protein PA2G_01867 [Pseudomonas aeruginosa 2192] gi|126194556|gb|EAZ58619.1| hypothetical protein PA2G_01867 [Pseudomonas aeruginosa 2192] Length = 283 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV + +IA + IP+G IG P + + PF Q+L + P+ + + Sbjct: 95 SLGRVALGYLIALAVAIPLGFVIGMSPLLYQALNPFIQVLKPISPLAWMPIALYTIR--- 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ ++ + W +L N G + D+ VA + ++ R +ILP P Sbjct: 152 -DSSVSAVFVIFICSIWPMLINTAFGVAGVRKDWLNVARTLEVSPLRKAFCVILPAAAPT 210 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ G TG+G ++ S V+ VL++ Sbjct: 211 IITGMRISMGIAWLVIVAAEMLIGG------TGIGYFVWNEWNNLSLANVIFAVLMIGVI 264 Query: 566 VLALNRFL 573 + L+ Sbjct: 265 GMLLDLLF 272 Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ +I+L + S L L P + +++ I L ++ + Sbjct: 92 LAHSLGRVALGYLIALAVAIPLGFVIGMSPLLYQALNPFIQVLKPISPLAWMPIALY--- 148 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++A+F IF +W M + + + +D V+R+ +S +K + + Sbjct: 149 -----TIRDSSVSAVFVIFICSIWPMLINTAFGVAGVRKDWLNVARTLEVSPLRKAFCVI 203 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA+EM++ G GIG ++ L +++A Sbjct: 204 LPAAAPTIITGMRISMGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSLANVIFA 257 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + + L D L + Sbjct: 258 VLMIGVIGMLLDLLFAQ 274 >gi|22299544|ref|NP_682791.1| bicarbonate transport system permease protein [Thermosynechococcus elongatus BP-1] gi|22295727|dbj|BAC09553.1| bicarbonate transport system permease protein [Thermosynechococcus elongatus BP-1] Length = 324 Score = 164 bits (415), Expect = 5e-38, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I++ RV +A+++ I +GI +G ++ + P Q L + P+ + Sbjct: 127 LARQTLISLTRVAQGYGLAAVVGITLGILVGTSKTLNKALDPIFQFLRMVAPLAWVPISL 186 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W IL N G P D+K V+ ++ ++ I+ Sbjct: 187 AALR----QNEPAAIFVIFITSIWPILINTAVGVREIPQDYKNVSRVLRLSKQTFFLKIL 242 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG A G AW A I +E+ G G+G +I ++ ++ E+++ Sbjct: 243 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----VAGIGFFIWDAYQQNYVTEIIVA 297 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L+R + Sbjct: 298 VVYIGAIGLILDRLV 312 Score = 160 bits (404), Expect = 7e-37, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 91/201 (45%), Gaps = 13/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ ++ + L S+ L L PI ++ + L ++ Sbjct: 125 QGLARQTLISLTRVAQGYGLAAVVGITLGILVGTSKTLNKALDPIFQFLRMVAPLAWVPI 184 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ P AAIF IF + +W + + + IP+D + VSR RLS Sbjct: 185 SLAALRQNEP--------AAIFVIFITSIWPILINTAVGVREIPQDYKNVSRVLRLSKQT 236 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P + + +++ W ++A+E+++ G + GIG +I A ++ + Sbjct: 237 FFLKILLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----VAGIGFFIWDAYQQNYV 291 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + + + D+L+ Sbjct: 292 TEIIVAVVYIGAIGLILDRLV 312 >gi|15595383|ref|NP_248875.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107099174|ref|ZP_01363092.1| hypothetical protein PaerPA_01000184 [Pseudomonas aeruginosa PACS2] gi|218888930|ref|YP_002437794.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254237577|ref|ZP_04930900.1| hypothetical protein PACG_03658 [Pseudomonas aeruginosa C3719] gi|254243294|ref|ZP_04936616.1| hypothetical protein PA2G_04102 [Pseudomonas aeruginosa 2192] gi|9946019|gb|AAG03575.1|AE004456_6 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126169508|gb|EAZ55019.1| hypothetical protein PACG_03658 [Pseudomonas aeruginosa C3719] gi|126196672|gb|EAZ60735.1| hypothetical protein PA2G_04102 [Pseudomonas aeruginosa 2192] gi|218769153|emb|CAW24913.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 538 Score = 163 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 76/538 (14%), Positives = 160/538 (29%), Gaps = 71/538 (13%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 + ++V L L + + R+ ++ + S R Sbjct: 56 WMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVASGAALGAWLGFSPRA 115 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 ++ P + IP L ++ +++F EL + + + V +T Sbjct: 116 ERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVLVKAVVVPVTIHTLV 167 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + + L E + RL W L +P ++P + + ++++ GW ++A E++ Sbjct: 168 GVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLASS 227 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 + GIG + + L + +L + V D+ + W ++ Sbjct: 228 E------GIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAI-----QWLDR------- 269 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336 + G R P Q Sbjct: 270 ----------------------------------RLLHWPQAATGEFRRRPPGRGWQRLQ 295 Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLI 394 L + W + A + V T+ L G + ++ R + + Sbjct: 296 VWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKRTLGGL 355 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++ + G+ +G P L + PL+ + Sbjct: 356 LLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLTAWFGLG----EPAKLT 411 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + + +L G ++ P E A + WR ++LPG P G A Sbjct: 412 FVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLAL 471 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 AW +I +E G+G+ + + + + G+L++ LN Sbjct: 472 IYAWLGTIGAEYFMPSD-----GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNAL 524 Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 80/226 (35%), Gaps = 17/226 (7%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 W + WQS ++ + ++ I++ R+ ++ +G W Sbjct: 56 WMSAQVLPTPELVWQSARELLAGELWSEL-------AISLRRLAWGLLAGVASGAALGAW 108 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 +GF P + P LA P + PL + L + L ++ + Sbjct: 109 LGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIH 164 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G +E A+ + +ILP P ++TG A W + + E+ Sbjct: 165 TLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELL 224 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + G+G + + + V + +LI+ + ++R + Sbjct: 225 A------SSEGIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAI 264 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ SLP + R L +++ F+ L R Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFG 380 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P ++ + I ++ +F P K+ +AA F + + + + ++ Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFF--------PLLLATQRGIASL 432 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L E +R RL W++ L +P + P + + +++ W + +E + D Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSD---- 488 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + + I ML + L + L + + + ++R Sbjct: 489 -GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 536 >gi|257060406|ref|YP_003138294.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 8802] gi|256590572|gb|ACV01459.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8802] Length = 280 Score = 163 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ +A+I+ I GI++G + + P Q L P + P+ + Sbjct: 84 LFWQSVASLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWVPIAL 143 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W IL N G P D+ V ++ +++ I+ Sbjct: 144 AALQ----QNQPAALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKFFFKIL 199 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG A G AW A I +E+ G + G+G +I +S + +++L Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYISDIILA 254 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L+RF+ Sbjct: 255 LVYIGAIGLMLDRFM 269 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 109/259 (42%), Gaps = 26/259 (10%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-----------VDIVPITLDVHS 60 S+ I P I ++ F++V + +++ G+ + P D+ Sbjct: 26 SQNILPPIVGIVGFLVVWQLCSMI--GLIKLPPPSDLWFNERTRIYLMYPFFNRGGTDVG 83 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + + R+L ++ + + L P+ ++++P L ++ + Sbjct: 84 LFWQSVASLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWVPIAL 143 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 P AA+F IF + VW + + + IP+D V + +LS + F Sbjct: 144 AALQQNQP--------AALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKFF 195 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P + + +++ W ++A+E+++ G + GIG +I + + + Sbjct: 196 FKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDSYQNNYISD 250 Query: 241 ILYAMLTMLGVIFLYDQLL 259 I+ A++ + + + D+ + Sbjct: 251 IILALVYIGAIGLMLDRFM 269 >gi|299133917|ref|ZP_07027111.1| nitrate ABC transporter, inner membrane subunit [Afipia sp. 1NLS2] gi|298591753|gb|EFI51954.1| nitrate ABC transporter, inner membrane subunit [Afipia sp. 1NLS2] Length = 299 Score = 163 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 23/254 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65 RI P + L F++V ++ + D + D L + Sbjct: 47 RIVPPLIVLALFLVVWELLCSKAGATLPPPLKV-FRDTKDLIFDPFFDNGGIDKGLFWHL 105 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S + R+ ++ + TL +S L PI ++++IP L +L ++ F + Sbjct: 106 SASLQRVALGYSLAAIAGIALGTLVGQSIWAMRGLDPIFQVLRTIPPLAWLPLSLAAFRD 165 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF IF + +W + + + NIP+D V+ RL+ ++ FW + + Sbjct: 166 GQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPFEFFWKIMI 217 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P + + + + W ++A+EM++ G GIG +I A + I+ A+ Sbjct: 218 PSAAPYIFTGLRIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSHISEIILAL 271 Query: 246 LTMLGVIFLYDQLL 259 + + V F+ D+++ Sbjct: 272 VYVGIVGFILDRMI 285 Score = 157 bits (396), Expect = 8e-36, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I I +G +G + P Q+L P + PL + Sbjct: 101 LFWHLSASLQRVALGYSLAAIAGIALGTLVGQSIWAMRGLDPIFQVLRTIPPLAWLPLSL 160 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VA+ + + ++ I+ Sbjct: 161 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPFEFFWKIM 216 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG G +W A I +E+ G G+G +I ++ E++L Sbjct: 217 IPSAAPYIFTGLRIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILA 270 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 271 LVYVGIVGFILDRMI 285 >gi|152996830|ref|YP_001341665.1| binding-protein-dependent transporter inner membrane component [Marinomonas sp. MWYL1] gi|150837754|gb|ABR71730.1| binding-protein-dependent transport systems inner membrane component [Marinomonas sp. MWYL1] Length = 323 Score = 163 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 85/219 (38%), Gaps = 16/219 (7%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 Y+ Y +++ V+ +AS+I IP+GI IG + S + P Q+ Sbjct: 95 SYVGKLRDYTGKPTFFDQIFTSLYTVLAGFGLASLIAIPLGILIGLNRSVYSALNPVIQV 154 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPN 477 + PLV VS +++ + S + W L N G +A Sbjct: 155 FKPVSPLAWLPLVTMVVSASYVSDDPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAVEK 214 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 D V+ + I++P P TG + G AW I +E+ + + Sbjct: 215 DLLNVSKVLQLGWMTHVMKIVIPSAIPLMFTGLRLSLGIAWMVLIAAEMLA------QNP 268 Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 GLG ++ + + G S +++ VL++ L+R + Sbjct: 269 GLGKFVWDEFQNGSSNSLGRIMVAVLMIGFIGYLLDRVM 307 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 84/207 (40%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + +L+ ++ L L +R + L P++ + + + L +L + Y Sbjct: 116 SLYTVLAGFGLASLIAIPLGILIGLNRSVYSALNPVIQVFKPVSPLAWLPLVTMVVSASY 175 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + L ++F + +W + + + +DL VS+ +L + Sbjct: 176 VSDDPMFSKSFLTSMFTVTLCCMWPTLINTAVGVAAVEKDLLNVSKVLQLGWMTHVMKIV 235 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 236 IPSAIPLMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 289 Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266 + A+L + + +L D+++ + W Sbjct: 290 MVAVLMIGFIGYLLDRVMLTIQRFASW 316 >gi|218248270|ref|YP_002373641.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 8801] gi|33591065|gb|AAQ23047.1| CmpB [Cyanothece sp. PCC 8801] gi|218168748|gb|ACK67485.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8801] Length = 280 Score = 163 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ +A+I+ I GI++G + + P Q L P + P+ + Sbjct: 84 LFWQSIASLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWVPIAL 143 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W IL N G P D+ V ++ +++ I+ Sbjct: 144 AALQ----QNQPAALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKFFFKIL 199 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG A G AW A I +E+ G + G+G +I +S + +++L Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYISDIILA 254 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L+RF+ Sbjct: 255 LVYIGAIGLMLDRFM 269 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 106/257 (41%), Gaps = 22/257 (8%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---------DVHSLP 62 S+ I P I +L F++V + +++ + I L L Sbjct: 26 SQNILPPIVGILGFLVVWQLCSMIGLIKLPPPSDLWFNERTRIYLMYPFFNRGGTDVGLF 85 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R+L ++ + + L P+ ++++P L ++ + Sbjct: 86 WQSIASLQRVLIGYTLAAIVGIAAGIFVGLNSFANKALDPLFQFLRTVPPLAWVPIALAA 145 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 P AA+F IF + VW + + + IP+D V + +LS + F+ Sbjct: 146 LQQNQP--------AALFVIFITAVWPILINTAVGVQQIPQDYINVRKVLQLSQKKFFFK 197 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P + + +++ W ++A+E+++ G + GIG +I + + + I+ Sbjct: 198 ILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDSYQNNYISDII 252 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + + + D+ + Sbjct: 253 LALVYIGAIGLMLDRFM 269 >gi|288935851|ref|YP_003439910.1| binding-protein-dependent transporters inner membrane component [Klebsiella variicola At-22] gi|288890560|gb|ADC58878.1| binding-protein-dependent transport systems inner membrane component [Klebsiella variicola At-22] Length = 522 Score = 163 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 79/532 (14%), Positives = 169/532 (31%), Gaps = 71/532 (13%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 + +V ++L L + + +++ + + L Sbjct: 44 AQILPAPSVVADTALSLLSGDLLAQWGFSLQHLALGLLLGAIAGTLLGALFGLVPAAAQR 103 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 + P+ + IP LG++ +V F K+ I + V MT + Q++ Sbjct: 104 VEPLFYALAQIPTLGWIPLLMVLFGIDNGLKLA--------VIVKTTVVPMTINTQQAVA 155 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 ++P+ L E SR S WQ+ +L +P S+PG + +++S W ++ E++ + Sbjct: 156 SVPQTLSEASRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSE-- 213 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279 GIG + + L + + + L Sbjct: 214 ----GIGYLMVWGRQLFQLDIVFVTIAVVGLSGMLM------------------------ 245 Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 W S V G + + ++ L Sbjct: 246 ----------------------EWAANRACSRLVFWPQPAAGRLAWKPQASWRALPLPIV 283 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + + + G+ + + ++ R VV + Sbjct: 284 LLALWQLA--SQWGWIDSGLFSSPLAVAARFVQGILSGELSAAMLASLGRAVVGGALGIA 341 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + G+ + RP P +L + PL+ + V N N + + Sbjct: 342 GGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVG----NDNGGKIVFIALA 397 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + + F+ + EVA + + R +ILPG P G A AW Sbjct: 398 SFFPMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWL 457 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +I +E + G+G+ + + + P ++ G++++ AL++ Sbjct: 458 GNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLVGITGAALDK 504 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 103/266 (38%), Gaps = 16/266 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P S R P LLA + + G+ + P + + L + Sbjct: 271 PQASWRALPLPIVLLALWQLASQWGWIDSGL--FSSPLAVAARFVQGILSGELSAAMLAS 328 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R + + + + L A R G + P L++++ I + +L + N Sbjct: 329 LGRAVVGGALGIAGGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNG 388 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 GK++ LA+ F M FS Q++ L+EV+R RL + + + +P + Sbjct: 389 GKIVFIALASFF--------PMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGA 440 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 PG+ + +++ W + +E + GIGS + A + D+ IL M+ + Sbjct: 441 APGIFAGLRLALIYAWLGNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLV 495 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLER 274 D+ R + + + ++R + Sbjct: 496 GITGAALDKA-GRLLEMRATRWRQQE 520 >gi|313112240|ref|ZP_07798013.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|310884515|gb|EFQ43109.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 538 Score = 163 bits (414), Expect = 6e-38, Method: Composition-based stats. Identities = 76/538 (14%), Positives = 159/538 (29%), Gaps = 71/538 (13%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 + ++V L L + + R+ ++ + S R Sbjct: 56 WMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGIASGAALGAWLGFSPRA 115 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 ++ P + IP L ++ +++F EL + + + V +T Sbjct: 116 ERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVLVKAVVVPVTIHTLV 167 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + + L E + RL W L +P ++P + + ++++ GW ++A E++ Sbjct: 168 GVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLASS 227 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 + GIG + + L + +L + V D+ + W + Sbjct: 228 E------GIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI-----QWLDH------- 269 Query: 277 GIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCS 336 + G R P Q Sbjct: 270 ----------------------------------RLLHWPQAATGEFRRRPPGRGWQRLQ 295 Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--TMFRVVVLI 394 L + W + A + V T+ L G + ++ R + + Sbjct: 296 VWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKRTLGGL 355 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++ + G+ +G P L + PL+ + Sbjct: 356 LLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLTAWFGLG----EPAKLT 411 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + + +L G ++ P E A + WR ++LPG P G A Sbjct: 412 FVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLAL 471 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 AW +I +E G+G+ + + + + G+L++ LN Sbjct: 472 IYAWLGTIGAEYFMPSD-----GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNAL 524 Score = 101 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 80/226 (35%), Gaps = 17/226 (7%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 W + WQS ++ + ++ I++ R+ ++ +G W Sbjct: 56 WMSAQVLPTPELVWQSARELLAGELWSEL-------AISLRRLAWGLLAGIASGAALGAW 108 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 +GF P + P LA P + PL + L + L ++ + Sbjct: 109 LGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIH 164 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G +E A+ + +ILP P ++TG A W + + E+ Sbjct: 165 TLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELL 224 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + G+G + + + V + +L++ + ++R + Sbjct: 225 A------SSEGIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI 264 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ SLP + R L +++ F+ L R Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFG 380 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P ++ + I ++ +F P K+ +AA F + + + + ++ Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFF--------PLLLATQRGIASL 432 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L E +R RL W++ L +P + P + + +++ W + +E + D Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSD---- 488 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + + I ML + L + L + + + ++R Sbjct: 489 -GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 536 >gi|254785247|ref|YP_003072675.1| nitrate transporter permease [Teredinibacter turnerae T7901] gi|237686520|gb|ACR13784.1| nitrate transporter, permease protein [Teredinibacter turnerae T7901] Length = 337 Score = 163 bits (414), Expect = 6e-38, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 89/230 (38%), Gaps = 19/230 (8%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + + Y + ++ V + A+I+ +P+GI+ G ++ + P Q+ Sbjct: 114 IKYREYTGAPTYLDQIWTSIKTVFTGFLFATIVAVPLGIFCGLSSTFNAAMNPIIQIFKP 173 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWL--------SLLMIFGTQWYILFNVIAGASAFPNDF 479 + P+V VS ++ + ++ + + W L N G ++ D Sbjct: 174 VSPLAWLPIVTMVVSATYVTTDEAWFSKSFLNSAITVTLCSLWPTLINTALGVASIDKDL 233 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 V + + +++P P TG + G W I +E+ + + GL Sbjct: 234 MNVGKVLQLGWFTKVTKLVIPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGL 287 Query: 540 GAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 G ++ + + G S +++ VL + L+R ++ L+ +G + Sbjct: 288 GKFVWDEFQNGSSNSLGRIMVAVLTIGIIGFLLDRIMFTLQNLFTFGDKR 337 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 80/196 (40%), Gaps = 13/196 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK- 130 + + + + + S + PI+ I + + L +L + Y Sbjct: 136 VFTGFLFATIVAVPLGIFCGLSSTFNAAMNPIIQIFKPVSPLAWLPIVTMVVSATYVTTD 195 Query: 131 ---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + L + + +W + + +I +DL V + +L + K L +P Sbjct: 196 EAWFSKSFLNSAITVTLCSLWPTLINTALGVASIDKDLMNVGKVLQLGWFTKVTKLVIPS 255 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYA 244 S+P + + +S+ GW ++A+EM+ PG+G ++ + L I+ A Sbjct: 256 SLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRIMVA 309 Query: 245 MLTMLGVIFLYDQLLF 260 +LT+ + FL D+++F Sbjct: 310 VLTIGIIGFLLDRIMF 325 >gi|298290413|ref|YP_003692352.1| nitrate ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926924|gb|ADH87733.1| nitrate ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 303 Score = 163 bits (413), Expect = 7e-38, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 85/200 (42%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + W +++ RV + +A+ + I +G+ IG + P Q+L P + Sbjct: 101 PQDIGLGWRVLVSLQRVAIGFGLAAGVGILLGVLIGQSVWAMRGLDPIFQVLRTVPPLAW 160 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ ++ + N ++ W ++ N G P D++ VA + + + Sbjct: 161 LPIALAAFR----DSNPSAIFVIFITAIWPVIINTAVGVRNIPQDYRNVAQVLRLNPFEF 216 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I+LP PY TG G +W A + +E+ + G G+G +I ++ Sbjct: 217 FAKIMLPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLS 270 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++++ ++ + L+R + Sbjct: 271 DIIVALVYIGVVGFVLDRLV 290 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + L +S L PI +++++P L +L Sbjct: 105 GLGWRVLVSLQRVAIGFGLAAGVGILLGVLIGQSVWAMRGLDPIFQVLRTVPPLAWLPIA 164 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V++ RL+ ++ Sbjct: 165 LAAFRDSNP--------SAIFVIFITAIWPVIINTAVGVRNIPQDYRNVAQVLRLNPFEF 216 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 217 FAKIMLPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLS 270 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V F+ D+L+ Sbjct: 271 DIIVALVYIGVVGFVLDRLV 290 >gi|85705781|ref|ZP_01036878.1| possible nitrate transport system permease protein [Roseovarius sp. 217] gi|85669771|gb|EAQ24635.1| possible nitrate transport system permease protein [Roseovarius sp. 217] Length = 277 Score = 163 bits (413), Expect = 7e-38, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 89/229 (38%), Gaps = 13/229 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + AW+ + D I +G +++RV+ ++A+++ IP+G IG P Sbjct: 60 VLAKAWEELSNPFYDAGPNDKGIGIQIGY-SIYRVLSGYLMAALVAIPLGFLIGMSPVAY 118 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + ++ + W +L N G + Sbjct: 119 KALNPFIQVLRPISPLAWMPLALFIIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 174 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 D+ VA + + + +ILP P VTG + G AW + +E+ G Sbjct: 175 RKDWVNVARTHELGHLKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 229 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHPLYLYGT 582 TG+G Y+ V+ +L++ + L+ Y Sbjct: 230 -TGIGYYVWNEWNNLDLTSVIFSILMIGIVGMMLDAAFATLQRAVAYAE 277 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 14/191 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+LS +++ L L S L P + +++ I L ++ + + Sbjct: 87 GYSIYRVLSGYLMAALVAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFIIQD 146 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +E +AIF IF +W M + + + +D V+R+ L + + + + Sbjct: 147 --------SEASAIFVIFICSIWPMLINTAFGVAGVRKDWVNVARTHELGHLKTAFTVIL 198 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P +V M +S+ W +VA+EM+V G GIG Y+ DL ++++++ Sbjct: 199 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 252 Query: 246 LTMLGVIFLYD 256 L + V + D Sbjct: 253 LMIGIVGMMLD 263 >gi|300866703|ref|ZP_07111387.1| bicarbonate transport permease protein [Oscillatoria sp. PCC 6506] gi|300335303|emb|CBN56547.1| bicarbonate transport permease protein [Oscillatoria sp. PCC 6506] Length = 281 Score = 163 bits (413), Expect = 8e-38, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A+++ I G+ +G P ++ + P Q L + P+ + Sbjct: 83 LFWQTLASLERVAKGYTLAAVVGIGTGVLVGTNPFLNKALDPIFQFLRMVAPLAWVPIAL 142 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W IL N G P+D+ VA ++ ++ I+ Sbjct: 143 AALQ----QNEPAALFVIFVTSVWPILINTAEGVRQIPDDYNNVAKVLQLSRKEYYLNIL 198 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P PY TG A G AW A I +E+ G TG+G +I + ++ E++L Sbjct: 199 FPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----ITGIGFFIWNAYQQNYISEILLA 253 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L+R + Sbjct: 254 VVYIGAVGLILDRLM 268 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 104/259 (40%), Gaps = 26/259 (10%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-----------VDIVPITLDVHS 60 S+ I P + + F+ V ++ G+ + P + + Sbjct: 25 SQSILPPLLGIFGFLFVWQFLS--SSGLIKLPGPSSLWTDERTRILLMYPFMNSKTYGVG 82 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + R+ ++ + L + L L PI ++ + L ++ + Sbjct: 83 LFWQTLASLERVAKGYTLAAVVGIGTGVLVGTNPFLNKALDPIFQFLRMVAPLAWVPIAL 142 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 P AA+F IF + VW + + + + IP D V++ +LS + + Sbjct: 143 AALQQNEP--------AALFVIFVTSVWPILINTAEGVRQIPDDYNNVAKVLQLSRKEYY 194 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + P ++P + + +++ W ++A+E+++ G T GIG +I A ++ + Sbjct: 195 LNILFPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIT-----GIGFFIWNAYQQNYISE 249 Query: 241 ILYAMLTMLGVIFLYDQLL 259 IL A++ + V + D+L+ Sbjct: 250 ILLAVVYIGAVGLILDRLM 268 >gi|27380844|ref|NP_772373.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354009|dbj|BAC50998.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 163 bits (413), Expect = 8e-38, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 92/220 (41%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ + D I L ++ RV ++A ++ IP+G IG P +S Sbjct: 118 VGAKLWEHVRRPFYDNGPNDKGLGIQL-AYSIARVGTGYLLAVLVAIPLGFLIGMSPLLS 176 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + ++ ++ + W +L N + G ++ Sbjct: 177 KALDPFIQVLKPISPLAWMPLALYTIK----DSSISAIFVIFICSIWPMLLNTVFGVASV 232 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 233 RKEWINVARTLEVGTIRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 287 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++ +L++ + L++ L Sbjct: 288 -TGIGYFVWNEWNNLSITNVIIAILLIGIVGMLLDQILAR 326 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 92/205 (44%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + L + + R+ + ++++L L S L L P + +++ I L ++ Sbjct: 136 NDKGLGIQLAYSIARVGTGYLLAVLVAIPLGFLIGMSPLLSKALDPFIQVLKPISPLAWM 195 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + + ++AIF IF +W M + + ++ ++ V+R+ + Sbjct: 196 PLALY--------TIKDSSISAIFVIFICSIWPMLLNTVFGVASVRKEWINVARTLEVGT 247 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++ + + +P + P ++ M +S+ W +VA+EM+V G GIG ++ Sbjct: 248 IRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 301 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 + ++ A+L + V L DQ+L R Sbjct: 302 SITNVIIAILLIGIVGMLLDQILAR 326 >gi|261855716|ref|YP_003262999.1| binding-protein-dependent transporters inner membrane component [Halothiobacillus neapolitanus c2] gi|261836185|gb|ACX95952.1| binding-protein-dependent transport systems inner membrane component [Halothiobacillus neapolitanus c2] Length = 320 Score = 163 bits (412), Expect = 8e-38, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 18/222 (8%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + Y + ++ V+ I+AS+I IP+GI IG + + + P Q+L Sbjct: 98 YPYTGQPTFVSQIGTSLVTVLSGFILASLIAIPLGIAIGLSSSLHAAVNPIIQILRPVSP 157 Query: 431 NVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 + PLV VS + + + S + ++ W + N G +A D V+ Sbjct: 158 LAWLPLVTIVVSALYASNDPMFSKSYLVSMITVLLCCLWPTIINTAVGVAAISQDLTNVS 217 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + W R I++P P TG + AW I +E+ + + GLG ++ Sbjct: 218 RVLRLNWWTHVRKIVVPSALPMMFTGLRLSLSIAWMVLIAAEMLA------QNPGLGKFV 271 Query: 544 AESTEKG---SFPEVVLGVLIMCCFVLALNR--FLWHPLYLY 580 + + G S +++ V+++ L+R L + Sbjct: 272 WDEFQNGSSDSLSRIMVAVVVIGLIGFMLDRTMLLLQRWISW 313 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 14/210 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +LS +++ L S L + PI+ I++ + L +L + LY Sbjct: 113 SLVTVLSGFILASLIAIPLGIAIGLSSSLHAAVNPIIQILRPVSPLAWLPLVTIVVSALY 172 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + L ++ + +W + + I +DL VSR RL+ W + Sbjct: 173 ASNDPMFSKSYLVSMITVLLCCLWPTIINTAVGVAAISQDLTNVSRVLRLNWWTHVRKIV 232 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 VP ++P + + +S+S W ++A+EM+ PG+G ++ + L I Sbjct: 233 VPSALPMMFTGLRLSLSIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLSRI 286 Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVWSNK 269 + A++ + + F+ D+ LL + I W K Sbjct: 287 MVAVVVIGLIGFMLDRTMLLLQRWISWDKK 316 >gi|220910273|ref|YP_002485584.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866884|gb|ACL47223.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 280 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ I A+++ I VGI IG P ++ + P Q L P + PL + Sbjct: 84 LFWQAMASLQRVMIGYIAAAVVGISVGILIGVNPFLNKALDPIFQFLRTVPPLAWVPLSL 143 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ W IL N G P D+ V ++ +++ I+ Sbjct: 144 AAFQ----QNQPAALFVIFITAIWPILINTAVGVKQIPQDYINVRQVLQLSNSKFFFKIL 199 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG A G AW A I +E+ G + G+G +I +S + +++L Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDSYQNNYISDIILA 254 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L+R + Sbjct: 255 LVYIGAIGLILDRVV 269 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 113/259 (43%), Gaps = 26/259 (10%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-----------DVHS 60 S I P I L+ F+LV +++ + GI + P ++ Sbjct: 26 SNNIIPAIVGLIGFLLVWQLLSSV--GIIKLPGPDALITNERTRTYLLYPFFNRGGTDVG 83 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L A + R++ + + + L + L L PI ++++P L ++ ++ Sbjct: 84 LFWQAMASLQRVMIGYIAAAVVGISVGILIGVNPFLNKALDPIFQFLRTVPPLAWVPLSL 143 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 F P AA+F IF + +W + + + IP+D V + +LS + F Sbjct: 144 AAFQQNQP--------AALFVIFITAIWPILINTAVGVKQIPQDYINVRQVLQLSNSKFF 195 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P + + +++ W ++A+E+++ G + GIG +I + + + Sbjct: 196 FKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDSYQNNYISD 250 Query: 241 ILYAMLTMLGVIFLYDQLL 259 I+ A++ + + + D+++ Sbjct: 251 IILALVYIGAIGLILDRVV 269 >gi|159030590|emb|CAO88253.1| cmpB [Microcystis aeruginosa PCC 7806] Length = 276 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ A+++ I VGI +G ++ + P Q L P + PL + Sbjct: 81 LFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTVPPLAWVPLSL 140 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W IL N G P D+ V ++ +++ I+ Sbjct: 141 AALQ----QNQPAALFVIFITAVWPILINTTVGVQQIPQDYINVKQVLQLSNQKFFFKIL 196 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG A G AW A I +E+ G + G+G +I ++ + +++L Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYISDIILA 251 Query: 559 VLIMCCFVLALNRFL 573 + + L L+RF+ Sbjct: 252 LFYIGGVGLLLDRFM 266 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 26/269 (9%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--- 58 F ++ S I P I +L F+++ +++++ G+ + P DI+ + Sbjct: 13 FNFSKFWKKHSGDILPPIVGILFFLILWQLMSMV--GLIKLPPPSDIITNERTRTYLMYP 70 Query: 59 --------HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSI 110 L + R+L + + + + L L P+ ++++ Sbjct: 71 FFDRGGIDKGLFWQTLASLQRVLIGYSFAAVVGIGVGIMVGLNSFLNKALDPLFQFLRTV 130 Query: 111 PILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSR 170 P L ++ ++ P AA+F IF + VW + + + IP+D V + Sbjct: 131 PPLAWVPLSLAALQQNQP--------AALFVIFITAVWPILINTTVGVQQIPQDYINVKQ 182 Query: 171 SFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIA 230 +LS + F+ + +P ++P + + +++ W ++A+E+++ G + GIG +I Sbjct: 183 VLQLSNQKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIW 237 Query: 231 LAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 A + + I+ A+ + GV L D+ + Sbjct: 238 DAYQNNYISDIILALFYIGGVGLLLDRFM 266 >gi|152988829|ref|YP_001345661.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150963987|gb|ABR86012.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 538 Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats. Identities = 79/552 (14%), Positives = 165/552 (29%), Gaps = 71/552 (12%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L L+ + + + ++V L L + + R+ ++ + Sbjct: 42 LGLALLWWVASHYHWMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVAS 101 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 T S R ++ P + IP L ++ +++F EL + + Sbjct: 102 GAALGTWLGFSARAERLVFPTFSALAQIPTLAWIPLFMLFFGIG--------ELLKLVVL 153 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + V +T + + L E + RL W L +P ++P + + ++++ Sbjct: 154 VKAVVVPVTIHTLVGVRDAQPKLREAAAVLRLPPRLLIWRLILPAALPAFLTGLRLALAQ 213 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 GW ++A E++ + GIG + + L + +L + V D+ + Sbjct: 214 GWTSLLAVELLASSE------GIGYLMVQGRQLFMLDIVFVCILVIGLVGVGMDRAI--- 264 Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGV 322 W ++ + G Sbjct: 265 --HWLDR-----------------------------------------RLLHWPQAATGE 281 Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 R P Q L + W + A + V T+ L Sbjct: 282 FRRRPPGRGWQRLQVWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLP 341 Query: 383 GCI--TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 G + ++ R + +++ + G+ +G P L + PL+ + Sbjct: 342 GALFDSLKRTLGGLLLGGGLGFLGGLLLGLWHPAERLFGPTFAALRQVAIFAWVPLLTAW 401 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + +L G ++ P E A + WR + LP Sbjct: 402 FGLG----EPAKLAFVALAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLALP 457 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P G A AW +I +E G+G+ + + + + G+L Sbjct: 458 GAAPSVFAGLRLALIYAWLGTIGAEYFMPSD-----GGIGSLMIGAQQLFRMDLIGAGML 512 Query: 561 IMCCFVLALNRF 572 ++ LN Sbjct: 513 LVGLTGALLNAL 524 Score = 99.2 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 87/262 (33%), Gaps = 17/262 (6%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 R L + F + + + + L ++ VA W S + Sbjct: 14 RPLPRLAPPSSAAFARRLGDSLLPWSLP-LGLALLWWVASHYHWMSAQVLPTPELVWQSA 72 Query: 378 YVIWLG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + G I++ R+ ++ +G W+GF + P LA P Sbjct: 73 RELLAGELWSELAISLRRLAWGLLAGVASGAALGTWLGFSARAERLVFPTFSALAQIPTL 132 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + PL + L + L ++ + + G +E A+ + Sbjct: 133 AWIPLFMLFFGIGELLKLVVLVKAVVVPV----TIHTLVGVRDAQPKLREAAAVLRLPPR 188 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +ILP P ++TG A W + + E+ + + G+G + + + Sbjct: 189 LLIWRLILPAALPAFLTGLRLALAQGWTSLLAVELLA------SSEGIGYLMVQGRQLFM 242 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 V + +L++ + ++R + Sbjct: 243 LDIVFVCILVIGLVGVGMDRAI 264 Score = 95.4 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ SLP + R L +++ F+ L + Sbjct: 321 LASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWHPAERLFG 380 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P ++ + I ++ +F P K+ LAA F + + + + ++ Sbjct: 381 PTFAALRQVAIFAWVPLLTAWFGLGEPAKLAFVALAAFF--------PLLLATQRGIASL 432 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L E +R RL W++ L +P + P + + +++ W + +E + D Sbjct: 433 PPSLGEAARVLRLGPWRRLLRLALPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSD---- 488 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + + I ML + L + L + + + ++R Sbjct: 489 -GGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLN-ALGQRIEARATRWR 536 >gi|50084748|ref|YP_046258.1| sulfate ester permease protein [Acinetobacter sp. ADP1] gi|49530724|emb|CAG68436.1| sulfate ester permease protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 541 Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats. Identities = 90/550 (16%), Positives = 191/550 (34%), Gaps = 74/550 (13%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVP------ITLDVHSLPQYASRTTLRMLSAMVIS 79 ++ + + + E +P I+ + + L + + R ++ Sbjct: 43 IVPVCLFALWWIASNEQWMPAQILPTPKDTWHSFVEIASQDLWSQLAISLERFGLGLLSG 102 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 +L L SR L + IP L +L +++ K I Sbjct: 103 VLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLK--------I 154 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F IF + + + + +I L+E++ + + L +P ++P + ++ Sbjct: 155 FIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLA 214 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 ++ GW ++A E++ + GIG + + L + + + V ++D +L Sbjct: 215 VAAGWTSLIAVELLASSE------GIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFIL 268 Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319 R +ER +P + + F K N ++ PLS V + + Sbjct: 269 HR----------IERKFVFWPHAALSAHTFHKKNRTDVFK----SWVLPLSLVVLWVVSS 314 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 WF ++ + W+ + + + + Sbjct: 315 ----------------------------WFNLISSQILPAPWKVLEALWSGI---QDFSL 343 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 I +++R ++ +II +I VGI +G I + + P L + PL+ + Sbjct: 344 ITAMYYSLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTA 403 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 L+ + + T + + G S+ P EV+S+ +T + +IL Sbjct: 404 WFGLEDLSK----IVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLIL 459 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P I P G A +W AS +E I G+G+Y+ + + V+ Sbjct: 460 PSIAPSMFAGFRLALLYSWMASFGAEYLMGSGI-----GIGSYMMAAQQNFEMERVIAAT 514 Query: 560 LIMCCFVLAL 569 +++ L Sbjct: 515 VLVAGLGAIL 524 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 21/243 (8%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIW---------LGCITMFRVVV 392 L IFW VC A+ + ++ T +D + I++ R + Sbjct: 38 LAIFWIVPVCLFALWWIASNEQWMPAQILPTPKDTWHSFVEIASQDLWSQLAISLERFGL 97 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 ++ + + +G+ +G+ + L P + PL++ + N Sbjct: 98 GLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIE----NSLK 153 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 ++ T I + AG KE+A+ ++LP PY+ TG Sbjct: 154 IFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRL 213 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A W + I E+ + + G+G + + V + + ++ + + Sbjct: 214 AVAAGWTSLIAVELLA------SSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFI 267 Query: 573 LWH 575 L Sbjct: 268 LHR 270 Score = 86.9 bits (214), Expect = 9e-15, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 96/237 (40%), Gaps = 14/237 (5%) Query: 23 LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L+ V++ + + + P +++ + + SL + R + ++I L Sbjct: 304 LSLVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLIIGGL 363 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + + + +L P L+ ++ I I ++ +F +L+ I Sbjct: 364 IGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLE--------DLSKIVF 415 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + M + ++ + +IP L EVS + R++ Q+ L +P P + +++ Sbjct: 416 ISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALL 475 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 W +E ++ GIGSY+ A + ++ ++ A + + G+ + L Sbjct: 476 YSWMASFGAEYLMGSGI-----GIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWL 527 >gi|206577350|ref|YP_002238921.1| putative sulfonate ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|206566408|gb|ACI08184.1| putative sulfonate ABC transporter, permease protein [Klebsiella pneumoniae 342] Length = 522 Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats. Identities = 78/532 (14%), Positives = 168/532 (31%), Gaps = 71/532 (13%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 + +V ++L L + + +++ + + L Sbjct: 44 AQILPAPSVVADTALSLLSGDLLAQWGFSLQHLALGLLLGAIAGTLLGALFGLVPAAAQR 103 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 + P+ + IP LG++ +V F K+ I + V MT + Q++ Sbjct: 104 VEPLFYALAQIPTLGWIPLLMVLFGIDNGLKLA--------VIVKTTVVPMTINTQQAVA 155 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 ++P+ L E R S WQ+ +L +P S+PG + +++S W ++ E++ + Sbjct: 156 SVPQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSE-- 213 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279 GIG + + L + + + L Sbjct: 214 ----GIGYLMVWGRQLFQLDIVFVTIAVVGLSGMLM------------------------ 245 Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 W S V G + + ++ L Sbjct: 246 ----------------------EWAANRACSRLVFWPQPAAGRLAWKPQASWRALPLPIV 283 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + + + G+ + + ++ R VV + Sbjct: 284 LLALWQLA--SQWGWIDSGLFSSPLAVAARFVQGILSGELSAAMLASLGRAVVGGALGIA 341 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + G+ + RP P +L + PL+ + V N N + + Sbjct: 342 GGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVG----NDNGGKIVFIALA 397 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + + F+ + EVA + + R +ILPG P G A AW Sbjct: 398 SFFPMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWL 457 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +I +E + G+G+ + + + P ++ G++++ AL++ Sbjct: 458 GNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLVGITGAALDK 504 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 103/266 (38%), Gaps = 16/266 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P S R P LLA + + G+ + P + + L + Sbjct: 271 PQASWRALPLPIVLLALWQLASQWGWIDSGL--FSSPLAVAARFVQGILSGELSAAMLAS 328 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R + + + + L A R G + P L++++ I + +L + N Sbjct: 329 LGRAVVGGALGIAGGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVGNDNG 388 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 GK++ LA+ F M FS Q++ L+EV+R RL + + + +P + Sbjct: 389 GKIVFIALASFF--------PMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGA 440 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 PG+ + +++ W + +E + GIGS + A + D+ IL M+ + Sbjct: 441 APGIFAGLRLALIYAWLGNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLV 495 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLER 274 D+ R + + + ++R + Sbjct: 496 GITGAALDKA-GRLLEMRATRWRQQE 520 >gi|159028058|emb|CAO88018.1| nrtB [Microcystis aeruginosa PCC 7806] Length = 277 Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 11/218 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + W+ I + DV + W ++ RV V +A+I+ I GI IG I Sbjct: 58 VVSETWELIINPFFNNGGTDVG-LFWQIFASLQRVAVGFTLAAIVGIAAGILIGSSALIY 116 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 I P Q+L P + P+ ++ N ++ W I+ N G Sbjct: 117 DAIDPIFQILRTVPPLAWLPISLAAFR----NNEPSAIFVIFITAIWPIIINTAVGVQQV 172 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D+K V+ ++ ++ I+ P PY TG G +W A + +E+ G Sbjct: 173 PQDYKNVSRVLKLSKVEYFFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGG----- 227 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ E++L ++ + L+R + Sbjct: 228 -VGIGFFIWDAWNSSMISEIILALIYVGIVGFLLDRLM 264 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + L S + + PI I++++P L +L + Sbjct: 79 GLFWQIFASLQRVAVGFTLAAIVGIAAGILIGSSALIYDAIDPIFQILRTVPPLAWLPIS 138 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F N P +AIF IF + +W + + + +P+D + VSR +LS + Sbjct: 139 LAAFRNNEP--------SAIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEY 190 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F+ + P ++P + + + + W +VA+EM++ G GIG +I A + Sbjct: 191 FFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSMIS 244 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V FL D+L+ Sbjct: 245 EIILALIYVGIVGFLLDRLM 264 >gi|89902501|ref|YP_524972.1| nitrate transport permease [Rhodoferax ferrireducens T118] gi|89347238|gb|ABD71441.1| nitrate transport permease [Rhodoferax ferrireducens T118] Length = 288 Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W + D I LG ++ RV + ++A ++ IP+G IG P + Sbjct: 75 IWGHLSDPFFDRGPNDKGIAIQLGY-SLGRVGLGFLLAMLVAIPLGFVIGMSPLMRKAFD 133 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + PL + + + + ++ + W +L N G +A ++ Sbjct: 134 PFIQVLKPISPLAWMPLALYTIK----DSSASGIFVIFICSIWPMLVNTAFGVAAVKREW 189 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + + R +ILP P +TG + G AW + +E+ G TG+ Sbjct: 190 LNVARTLEVNPLRTAFQVILPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGI 243 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G ++ S P V+ + ++ + L+ Sbjct: 244 GYFVWNEWNNLSLPNVIFAIGVIGVVGMLLDLLF 277 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 82/197 (41%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ ++++L + S + P + +++ I L ++ + Sbjct: 97 LGYSLGRVGLGFLLAMLVAIPLGFVIGMSPLMRKAFDPFIQVLKPISPLAWMPLALY--- 153 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + IF IF +W M + + + R+ V+R+ ++ + + + Sbjct: 154 -----TIKDSSASGIFVIFICSIWPMLVNTAFGVAAVKREWLNVARTLEVNPLRTAFQVI 208 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA+EM+V G GIG ++ L +++A Sbjct: 209 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLPNVIFA 262 Query: 245 MLTMLGVIFLYDQLLFR 261 + + V L D L + Sbjct: 263 IGVIGVVGMLLDLLFGQ 279 >gi|149198798|ref|ZP_01875841.1| 2-isopropylmalate synthase-like protein [Lentisphaera araneosa HTCC2155] gi|149138234|gb|EDM26644.1| 2-isopropylmalate synthase-like protein [Lentisphaera araneosa HTCC2155] Length = 505 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 80/221 (36%), Gaps = 20/221 (9%) Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I Y ++ +++ V+ +A++I IP+GI G P I + + P Q Sbjct: 276 IFKGKEYNSNGSIVDYIKLSITTVLFGFFLAAVIAIPMGILCGLSPSIMTALNPLIQTFR 335 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLW-----------LSLLMIFGTQWYILFNVIAGASAF 475 + + + + + + + + W L N G S+ Sbjct: 336 PVSPLAWVLITIQIIDGIFVGDKALTGEILKNTFLHAGITVALCSMWATLSNTALGVSSV 395 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 D VA + + I++P PY TG G W IV+E+ + Sbjct: 396 DPDHMNVAKVLKLNWFDRIFKIVIPSAIPYIFTGLRITLGVGWMVLIVAEMMA------T 449 Query: 536 TTGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + GLG +I + + S +++ + I+ L+R + Sbjct: 450 SRGLGWFIDQEYQNNKVESLANIIVCIFIIGLIGAVLDRIM 490 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 90/224 (40%), Gaps = 18/224 (8%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 S+ Y + +L ++ + L S + L P++ + + L ++ Sbjct: 284 SNGSIVDYIKLSITTVLFGFFLAAVIAIPMGILCGLSPSIMTALNPLIQTFRPVSPLAWV 343 Query: 117 TFTVVYFMNLYPG--KVIGAELAAIFA-----IFTSQVWNMTFSMYQSLCNIPRDLEEVS 169 T+ ++ G + G L F + +W + + ++ D V+ Sbjct: 344 LITIQIIDGIFVGDKALTGEILKNTFLHAGITVALCSMWATLSNTALGVSSVDPDHMNVA 403 Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 + +L+ + + + + +P ++P + + +++ GW ++ +EM+ G+G +I Sbjct: 404 KVLKLNWFDRIFKIVIPSAIPYIFTGLRITLGVGWMVLIVAEMMA------TSRGLGWFI 457 Query: 230 ALAIKEQ---DLLAILYAMLTMLGVIFLYDQL--LFRPMIVWSN 268 + L I+ + + + + D++ +F+ ++ +++ Sbjct: 458 DQEYQNNKVESLANIIVCIFIIGLIGAVLDRIMSIFQKLVSFND 501 >gi|46200802|ref|ZP_00056318.2| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 277 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 23/257 (8%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62 I+ R+ P + L + + + + + D P+ +D L Sbjct: 27 IAGRVLPPMIGLAVVLGIWQL-ACSGPNAMLPGPAKVVHDTWPLIVDPFFDHGGVDKGLF 85 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R+ +S + L +S L PI +++++P L +L ++ Sbjct: 86 WHLFASLKRVAVGFSLSAVAGVFLGVLIGQSTMAYRALDPIFQVLRTVPPLAWLPISLAA 145 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P +AIF IF + VW + + + NIP+D V+ RLS + F+ Sbjct: 146 FRQADP--------SAIFVIFITSVWPIILNTAVGVRNIPQDYRNVAAVLRLSPLEFFFK 197 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P + + + + W +VA+EM++ G GIG +I A + I+ Sbjct: 198 IVIPATVPYIFTGLKIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLMSEII 251 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + V F+ D+++ Sbjct: 252 LALIYVGLVGFMLDRMI 268 Score = 160 bits (404), Expect = 9e-37, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 83/195 (42%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV V ++++ + +G+ IG + P Q+L P + P+ + Sbjct: 84 LFWHLFASLKRVAVGFSLSAVAGVFLGVLIGQSTMAYRALDPIFQVLRTVPPLAWLPISL 143 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VA+ ++ ++ I+ Sbjct: 144 AAFR----QADPSAIFVIFITSVWPIILNTAVGVRNIPQDYRNVAAVLRLSPLEFFFKIV 199 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG G +W A + +E+ G G+G +I ++ E++L Sbjct: 200 IPATVPYIFTGLKIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLMSEIILA 253 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 254 LIYVGLVGFMLDRMI 268 >gi|27377915|ref|NP_769444.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351061|dbj|BAC48069.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 298 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 23/254 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65 R+ P + + LV ++ G R D + LD L + Sbjct: 46 RVIPPLVVIALLTLVWELVCRRT-GSALPPPSRVFKDTKELILDPFFDHGGIDKGLFWHL 104 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S + R+ +S + L +S L P+ ++++IP L +L ++ F + Sbjct: 105 SASLQRVAFGYSLSAIAGIALGVLVGQSVWAMRGLDPLFQVLRTIPPLAWLPLSLAAFRD 164 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF IF + +W + + + NIP+D V+ +L+ + F + + Sbjct: 165 GQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFGKIMI 216 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P + + + + W +VA+EM++ G GIG +I A + I+ A+ Sbjct: 217 PAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEIILAL 270 Query: 246 LTMLGVIFLYDQLL 259 + + V F+ D+L+ Sbjct: 271 IYVGIVGFVLDRLI 284 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 100/275 (36%), Gaps = 18/275 (6%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +P+ K E +++ V +L + W V + S + Sbjct: 20 APVVAMTPKRPPRSEAYARMVRETAVRVIPPLVVIALLTLVWELVCRRTGSALPPPSRVF 79 Query: 367 IVNHFTYQDVLY--------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 D + + W ++ RV +++I I +G+ +G + Sbjct: 80 KDTKELILDPFFDHGGIDKGLFWHLSASLQRVAFGYSLSAIAGIALGVLVGQSVWAMRGL 139 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 P Q+L P + PL ++ + ++ + W I+ N G P D Sbjct: 140 DPLFQVLRTIPPLAWLPLSLAAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQD 195 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 ++ VA+ + ++ I++P PY TG G +W A + +E+ G G Sbjct: 196 YRNVAAVVQLNPLEFFGKIMIPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VG 249 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +G +I ++ E++L ++ + L+R + Sbjct: 250 IGFFIWDAWNSSHISEIILALIYVGIVGFVLDRLI 284 >gi|290509885|ref|ZP_06549256.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp. 1_1_55] gi|289779279|gb|EFD87276.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp. 1_1_55] Length = 522 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 82/532 (15%), Positives = 170/532 (31%), Gaps = 71/532 (13%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 + +V ++L L + + +++ + + L Sbjct: 44 AQILPAPSVVADTALSLLSGDLLAQWGFSLQHLALGLLLGAIAGTLLGALFGLVPAAAQR 103 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 + P+ + IP LG++ +V F K+ I + V M + Q++ Sbjct: 104 VEPLFYALAQIPTLGWIPLLMVLFGIDNGLKLA--------VIVKTTVVPMIINTQQAVA 155 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 ++P+ L E R S WQ+ +L +P S+PG + +++S W ++ E++ + Sbjct: 156 SVPQTLSEAGRVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLASSE-- 213 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIY 279 GIG + + L + + + L W+ Sbjct: 214 ----GIGYLMVWGRQLFQLDIVFVTIAVVGLSGMLM---------EWAA----------- 249 Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 + + L+ + R L P L L Sbjct: 250 ------------NRACSRLVFWPQPAAGRLAWKPQASWRALP-----LPIVLLALWQLAS 292 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +D F VA + ++ ++ R VV + Sbjct: 293 QWGWIDSVLFSSPLAVAARFVQGILSGELSA-----------AMLASLGRAVVGGALGIA 341 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + G+ + RP P +L + PL+ + V N N + + Sbjct: 342 GGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVG----NDNGGKIVFIALA 397 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + + F+ + EVA + + R +ILPG P G A AW Sbjct: 398 SFFPMFFSTLQAVLQRNPQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWL 457 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +I +E + G+G+ + + + P ++ G++++ AL++ Sbjct: 458 GNIGAEYFMSSGV-----GIGSLMINAQQLLDMPTILCGMVLVGITGAALDK 504 Score = 99.2 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 92/232 (39%), Gaps = 14/232 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 + P + + L + R + + + + L A R G + P Sbjct: 303 SSPLAVAARFVQGILSGELSAAMLASLGRAVVGGALGIAGGLLCGLLLALRPRAGQIFTP 362 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L++++ I + +L + N GK++ LA+ F M FS Q++ Sbjct: 363 TLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFF--------PMFFSTLQAVLQRN 414 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L+EV+R RL + + + +P + PG+ + +++ W + +E + Sbjct: 415 PQLDEVARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFMSSGV---- 470 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 GIGS + A + D+ IL M+ + D+ R + + + ++R + Sbjct: 471 -GIGSLMINAQQLLDMPTILCGMVLVGITGAALDKA-GRLLEMRATRWRQQE 520 >gi|119476871|ref|ZP_01617152.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [marine gamma proteobacterium HTCC2143] gi|119449678|gb|EAW30915.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [marine gamma proteobacterium HTCC2143] Length = 337 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V +Y + ++ V ++A+++ +P+GI G + I P Q Sbjct: 112 VKIRSYTGKATFLDQIFTSLLTVAFGFMVATLVAVPLGILCGLSESLYRCINPIIQTFKP 171 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS +++ + L + + W + N I G ++ D Sbjct: 172 VSPLAWLPLVTMVVSALYVSDDPLFDKAFLTSAFTVALCCLWPTVVNTIVGVASIDRDLI 231 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + R +++P P TG + W I +E+ + + GLG Sbjct: 232 NVSRVLRLGSLVHIRKVVIPSAIPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLG 285 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 +I + + G S +++ VL++ L+ + Sbjct: 286 KFIWDEFQNGSSNSLGRIMVAVLVIGIIGFILDSLM 321 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + L + +++ L L S L + PI+ + + L +L + LY Sbjct: 130 SLLTVAFGFMVATLVAVPLGILCGLSESLYRCINPIIQTFKPVSPLAWLPLVTMVVSALY 189 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 A L + F + +W + + +I RDL VSR RL + Sbjct: 190 VSDDPLFDKAFLTSAFTVALCCLWPTVVNTIVGVASIDRDLINVSRVLRLGSLVHIRKVV 249 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S++ GW ++A+EM+ PG+G +I + L I Sbjct: 250 IPSAIPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSNSLGRI 303 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+L + + F+ D L+ Sbjct: 304 MVAVLVIGIIGFILDSLML 322 >gi|56752484|ref|YP_173185.1| permease [Synechococcus elongatus PCC 6301] gi|81300298|ref|YP_400506.1| nitrate transport permease [Synechococcus elongatus PCC 7942] gi|75504666|sp|Q55106|CMPB_SYNE7 RecName: Full=Bicarbonate transport system permease protein CmpB gi|81676789|sp|Q5MZ55|CMPB_SYNP6 RecName: Full=Bicarbonate transport system permease protein CmpB gi|1019379|dbj|BAA05387.1| CmpB [Synechococcus elongatus PCC 7942] gi|56687443|dbj|BAD80665.1| permease protein [Synechococcus elongatus PCC 6301] gi|81169179|gb|ABB57519.1| nitrate transport permease [Synechococcus elongatus PCC 7942] Length = 278 Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV IA+II I VGI +G +++ + P Q L + P+ + Sbjct: 82 LFWQTIASLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIAL 141 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ W IL N G P D+ VA ++ ++ ++ Sbjct: 142 VAFQ----QNQPAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVV 197 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG A G +W A I +E+ G + G+G +I ++ ++ +++L Sbjct: 198 LPAALPYIFTGLRIAIGLSWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYVSDIILA 252 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L+RF+ Sbjct: 253 VIYIGAVGLLLDRFV 267 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 95/212 (44%), Gaps = 18/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + R+ I+ + L +R+L +L P+ ++ I L ++ Sbjct: 80 KGLFWQTIASLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPI 139 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +V F P AAIF IF + VW + + + + IP+D V+R R+S + Sbjct: 140 ALVAFQQNQP--------AAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSK 191 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++P + + +++ W ++A+E+++ G + GIG +I A ++ + Sbjct: 192 YLMKVVLPAALPYIFTGLRIAIGLSWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYV 246 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 I+ A++ + V L D+ + W ++ Sbjct: 247 SDIILAVIYIGAVGLLLDR-----FVAWLQRW 273 >gi|331019006|gb|EGH99062.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 284 Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%) Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 +A++++ D I L ++ RV +A+++ IP+G IG P + Sbjct: 68 AALAYKNLSDPFYDRGPNDKGIGIQL-AYSLGRVGAGYFLAALVAIPLGFLIGMSPLLYR 126 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + PF Q+L + P+ + + + ++ + W +L N G + Sbjct: 127 ALDPFIQVLKPISPLAWMPIALYTIKDSTTS----AIFVIFICSVWPMLINTAFGVAGVR 182 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 ++ VA ++ R +ILP P +TG + G AW + +E+ G Sbjct: 183 KEWLNVARVLEVSPLRKAFLVILPAAAPTIITGMRISMGIAWLVIVAAEMLIGG------ 236 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579 TG+G ++ S V+ VL++ + L+ ++ L Sbjct: 237 TGIGYFVWNQWNNLSLGNVIFAVLMIGVIGMLLD-LMFARLQR 278 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ + ++ L L S L L P + +++ I L ++ + Sbjct: 93 LAYSLGRVGAGYFLAALVAIPLGFLIGMSPLLYRALDPFIQVLKPISPLAWMPIALY--- 149 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + +AIF IF VW M + + + ++ V+R +S +K + + Sbjct: 150 -----TIKDSTTSAIFVIFICSVWPMLINTAFGVAGVRKEWLNVARVLEVSPLRKAFLVI 204 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA+EM++ G GIG ++ L +++A Sbjct: 205 LPAAAPTIITGMRISMGIAWLVIVAAEMLIGGT------GIGYFVWNQWNNLSLGNVIFA 258 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + + L D + R Sbjct: 259 VLMIGVIGMLLDLMFAR 275 >gi|91786202|ref|YP_547154.1| nitrate transport permease [Polaromonas sp. JS666] gi|91695427|gb|ABE42256.1| nitrate transport permease [Polaromonas sp. JS666] Length = 287 Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 11/218 (5%) Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 G W+ + + D +I LG ++ RV + ++A + +P+G IG P Sbjct: 67 LGQMGAAIWKQVSNPLYDNGPNDKGILIQLGH-SLARVGLGFLLACAVAVPLGFVIGMSP 125 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + PF Q+L + PL + + + ++ ++ + W +L N G Sbjct: 126 LLRRAFDPFIQVLKPISPLAWMPLALYTIK----DSSISGIFVIFICSVWPMLINTAFGV 181 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 SA ++ VAS+ ++ R +ILP P TG + G AW + +E+ G Sbjct: 182 SAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGG-- 239 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 TG+G ++ S V+ +L++ + L+ Sbjct: 240 ----TGIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLD 273 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 79/192 (41%), Gaps = 14/192 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ +++ + S L P + +++ I L ++ + Sbjct: 96 LGHSLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDPFIQVLKPISPLAWMPLALY--- 152 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ IF IF VW M + + + R+ V+ + +S +K + + Sbjct: 153 -----TIKDSSISGIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVI 207 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P + M +SM W +VA+EM+V G GIG ++ L +++A Sbjct: 208 LPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLTNVIFA 261 Query: 245 MLTMLGVIFLYD 256 +L + V L D Sbjct: 262 ILVIGIVGMLLD 273 >gi|94501158|ref|ZP_01307681.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Oceanobacter sp. RED65] gi|94426734|gb|EAT11719.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Oceanobacter sp. RED65] Length = 332 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 85/218 (38%), Gaps = 16/218 (7%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y Y+ + I +++ V ++A I IP+GI G +++ + P Q+ Sbjct: 107 YEPRVREYRGRVTFIDQIITSLYTVFTGFLLAVSIAIPLGIATGLSKTLNTALNPIIQIF 166 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPND 478 + P+V VS +++ + W ++ + W L N G + D Sbjct: 167 KPVSPLAWLPIVTMVVSAVYVSDDPWFEKSFVTSAITVTLCCLWPTLINTAVGVANISED 226 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 V+ + + R ++LP P TG + G W I +E+ + + G Sbjct: 227 LINVSKVLRLNWFTKVRKVVLPSALPMMFTGMRLSLGVGWMVLIAAEMLA------QNPG 280 Query: 539 LGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 LG ++ + + G S +++ V+ + L+ + Sbjct: 281 LGKFVWDEFQNGSSDSLGRIMVAVITIGFIGFILDSLM 318 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + ++++ S+ L L PI+ I + + L +L + +Y Sbjct: 127 SLYTVFTGFLLAVSIAIPLGIATGLSKTLNTALNPIIQIFKPVSPLAWLPIVTMVVSAVY 186 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + + +W + + NI DL VS+ RL+ + K + Sbjct: 187 VSDDPWFEKSFVTSAITVTLCCLWPTLINTAVGVANISEDLINVSKVLRLNWFTKVRKVV 246 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + M +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 247 LPSALPMMFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLGRI 300 Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVW 266 + A++T+ + F+ D L+ + + W Sbjct: 301 MVAVITIGFIGFILDSLMLMLQRWVSW 327 >gi|89055532|ref|YP_510983.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] gi|88865081|gb|ABD55958.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] Length = 356 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 17/210 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ V ++A+++ +P+GI G ++ + P Q+ + P+V VS Sbjct: 153 SITTVFFGFLLATVVAVPLGIAAGLSATANAALNPIIQIFKPVSPLAWLPIVSIVVSALA 212 Query: 446 LNPNLW------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + L+ ++ + + W L N G ++ D V+ + W + ++L Sbjct: 213 ADDGLFEKSFMVSAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMGTWTKIQKLVL 272 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEVV 556 P P TG + G W I +E+ + + GLG ++ + + G S +++ Sbjct: 273 PSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIM 326 Query: 557 LGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 + VL + L+R ++ L+ + Sbjct: 327 VAVLTIGLIGFLLDRLMFTIQSLFTFTNNR 356 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 11/198 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +++ + A S L PI+ I + + L +L + L Sbjct: 153 SITTVFFGFLLATVVAVPLGIAAGLSATANAALNPIIQIFKPVSPLAWLPIVSIVVSALA 212 Query: 128 P--GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G + + + + +W + + +I +DL VS+ ++ W K L + Sbjct: 213 ADDGLFEKSFMVSAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMGTWTKIQKLVL 272 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAIL 242 P ++P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ Sbjct: 273 PSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIM 326 Query: 243 YAMLTMLGVIFLYDQLLF 260 A+LT+ + FL D+L+F Sbjct: 327 VAVLTIGLIGFLLDRLMF 344 >gi|2501375|sp|Q51881|NRTB_PHOLA RecName: Full=Nitrate transport permease protein nrtB gi|887567|emb|CAA79657.1| hydrophobic protein [Geitlerinema sp. PCC 8501] Length = 279 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV V ++A+I I +GI IG + + P Q+L P + P+ + Sbjct: 82 LFWQIAASLQRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLPISL 141 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W I+ N G P D+ VA ++ ++ ++ Sbjct: 142 AAFR----DSQPAAIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDYFLKVL 197 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG A G +W A + +E+ + G G+G +I ++ GS EV+L Sbjct: 198 LPATVPYIFTGLKIAIGLSWLAIVAAEMLTGG------VGIGFFIWDAYNSGSNSEVILA 251 Query: 559 VLIMCCFVLALNRFL 573 ++ + L LN + Sbjct: 252 IIYVGLVGLLLNALV 266 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 23/260 (8%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI---------VPITLDVH 59 + + I +I +AF +++GI +L G P +V + Sbjct: 21 ALVGKTIRRSIPTAIAFFVLLGIWQLLCSGENAACRPIQVVQESWDLIIDPFYRGSGTDQ 80 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + + R+ +++ + L S + L PI +++++P L +L + Sbjct: 81 GLFWQIAASLQRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLPIS 140 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P AAIF IF + +W + + + NIP+D V+R +LS Sbjct: 141 LAAFRDSQP--------AAIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDY 192 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P ++P + + +++ W +VA+EM+ G GIG +I A Sbjct: 193 FLKVLLPATVPYIFTGLKIAIGLSWLAIVAAEMLTGGV------GIGFFIWDAYNSGSNS 246 Query: 240 AILYAMLTMLGVIFLYDQLL 259 ++ A++ + V L + L+ Sbjct: 247 EVILAIIYVGLVGLLLNALV 266 >gi|39934437|ref|NP_946713.1| sulfate ester transport system permease [Rhodopseudomonas palustris CGA009] gi|39648286|emb|CAE26806.1| sulfate ester transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 538 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 71/563 (12%), Positives = 171/563 (30%), Gaps = 70/563 (12%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P ++ + +A + + + + +V L +L + Sbjct: 30 PAWLRSSALLGLVVPVALLALWSVAAERHWMSSQVLPTPALVWQTAGELLADNLLSNLAI 89 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+L ++ L SRR+ + P + +P L ++ F ++ Sbjct: 90 SLQRLLFGFTLAALAGGFLGGAMGLSRRVEAAIYPTFIALVQVPTLAWIPFLMMVLGLG- 148 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E I I + V + + + ++ L E +R RL +++ + +P Sbjct: 149 -------EALKIVVIIKAVVTPVVIYTHVGVRDVDPKLLEATRILRLGFFRRLGSVILPA 201 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + + + ++ GW +VA E++ + GIG + + L + +L Sbjct: 202 ALPAFLTGLRLGLAQGWTSLVAVELLASSE------GIGFLMVWGRQLFQLDVVFVCILV 255 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 + V + D L + ++ + Sbjct: 256 IGIVGLVMD------------------------------------RGLNVVDRAAVRWPR 279 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 P + ++ + FP L + S + V + Sbjct: 280 PALAEHRTARGGYRLLSWLFPAGLLAAWAAASASGAISPTMLPSPAAVLSVLGHGLADGS 339 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +++ R + + + + VG+ +G + L Sbjct: 340 FES-----------AMGLSLQRAFIGLALGAGSGFVVGLAMGLNRPLDRLFNGTLAALRL 388 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 + PL+ + V + + + + + G + E + + Sbjct: 389 VAIFAWIPLLTAWVGLGEASK----ITFVAIASFFPMQLAAYRGVATLSPHLIEASWTLR 444 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + G R ++LPGI P G A W ++ +E G+G+ + + Sbjct: 445 LGGIDRLRCLVLPGIAPSVFAGLRLALLQCWIGTMGAEYFM-----PSGGGIGSLMIGAQ 499 Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570 + V+ ++++ LN Sbjct: 500 QMFRTDVVLAAMVMIGVVAALLN 522 Score = 101 bits (253), Expect = 3e-19, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 84/268 (31%), Gaps = 18/268 (6%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--------AWQSIG 365 R V F F + + + + ++ ++ + Sbjct: 10 DYPPRGAAVAGFRTLPRFGVPAWLRSSALLGLVVPVALLALWSVAAERHWMSSQVLPTPA 69 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + ++ I++ R++ +A++ +G +G + + I P L Sbjct: 70 LVWQTAGELLADNLLSNLAISLQRLLFGFTLAALAGGFLGGAMGLSRRVEAAIYPTFIAL 129 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + P ++ + +++I ++ G E Sbjct: 130 VQVPTLAWIPFLMMVLGLGEA----LKIVVIIKAVVTPVVIYTHVGVRDVDPKLLEATRI 185 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + +R +ILP P ++TG W + + E+ + + G+G + Sbjct: 186 LRLGFFRRLGSVILPAALPAFLTGLRLGLAQGWTSLVAVELLA------SSEGIGFLMVW 239 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + V + +L++ L ++R L Sbjct: 240 GRQLFQLDVVFVCILVIGIVGLVMDRGL 267 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 81/230 (35%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ ++ L S + R + + FV +R L + Sbjct: 321 LPSPAAVLSVLGHGLADGSFESAMGLSLQRAFIGLALGAGSGFVVGLAMGLNRPLDRLFN 380 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 L ++ + I ++ + K+ +A+ F M + Y+ + + Sbjct: 381 GTLAALRLVAIFAWIPLLTAWVGLGEASKITFVAIASFF--------PMQLAAYRGVATL 432 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E S + RL G + L +P P + + +++ W + +E + Sbjct: 433 SPHLIEASWTLRLGGIDRLRCLVLPGIAPSVFAGLRLALLQCWIGTMGAEYFMPSG---- 488 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + ++ A + M+GV+ + + + ++R Sbjct: 489 -GGIGSLMIGAQQMFR-TDVVLAAMVMIGVVAALLNAIGSRIEARATRWR 536 >gi|149203199|ref|ZP_01880169.1| possible nitrate transport system permease protein [Roseovarius sp. TM1035] gi|149143032|gb|EDM31071.1| possible nitrate transport system permease protein [Roseovarius sp. TM1035] Length = 277 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 13/229 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + AW+ + D I +G +++RV+ ++A+++ IP+G IG P Sbjct: 60 VMAKAWEELSNPFYDAGPNDKGIGIQIGY-SIYRVLSGYLMAAVVAIPLGFLIGMSPVAY 118 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + ++ + W +L N G + Sbjct: 119 KALNPFIQVLRPISPLAWMPLALFVIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 174 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 D+ VA + + ++ +ILP P VTG + G AW + +E+ G Sbjct: 175 RQDWVNVARTHELGHFKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 229 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHPLYLYGT 582 TG+G Y+ V+ +L++ + L+ Y Sbjct: 230 -TGIGYYVWNEWNNLDLTSVIFSILMIGIVGMMLDAAFATLQRAVAYAE 277 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 14/191 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+LS +++ + L S L P + +++ I L ++ + + Sbjct: 87 GYSIYRVLSGYLMAAVVAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFVIQD 146 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +E +AIF IF +W M + + + +D V+R+ L ++ + + + Sbjct: 147 --------SEASAIFVIFICSIWPMLINTAFGVAGVRQDWVNVARTHELGHFKTAFTVIL 198 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P +V M +S+ W +VA+EM+V G GIG Y+ DL ++++++ Sbjct: 199 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 252 Query: 246 LTMLGVIFLYD 256 L + V + D Sbjct: 253 LMIGIVGMMLD 263 >gi|148254269|ref|YP_001238854.1| nitrate transport permease NrtB [Bradyrhizobium sp. BTAi1] gi|146406442|gb|ABQ34948.1| nitrate transport permease protein (nrtB) [Bradyrhizobium sp. BTAi1] Length = 304 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 23/254 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65 R+ P + L F++V ++ G R D + D L + Sbjct: 52 RVVPPLIVLALFLIVWELLCRRA-GSALPPPSRVFSDTRELIFDPFFDHGGIDKGLFWHL 110 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ I+ + TL +S L PI ++++IP L +L ++ F + Sbjct: 111 EASLRRVAIGYAIAAIVGVAVGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPLSLAAFRD 170 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF IF + VW + + + NIP+D V+ +L+ + F + + Sbjct: 171 GQP--------SAIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFAKIMI 222 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P + + + + W +VA+EM++ G GIG +I A + I+ A+ Sbjct: 223 PAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEIVLAL 276 Query: 246 LTMLGVIFLYDQLL 259 + + F+ D+L+ Sbjct: 277 FYVGIIGFVLDRLI 290 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + IA+I+ + VG IG + P Q+L P + PL + Sbjct: 106 LFWHLEASLRRVAIGYAIAAIVGVAVGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPLSL 165 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VA+ + ++ I+ Sbjct: 166 AAFRDGQPS----AIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFAKIM 221 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG G +W A + +E+ G G+G +I ++ E+VL Sbjct: 222 IPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIVLA 275 Query: 559 VLIMCCFVLALNRFL 573 + + L+R + Sbjct: 276 LFYVGIIGFVLDRLI 290 >gi|283784926|ref|YP_003364791.1| ABC transporter permease [Citrobacter rodentium ICC168] gi|282948380|emb|CBG87966.1| ABC transporter, permease component [Citrobacter rodentium ICC168] Length = 522 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 72/478 (15%), Positives = 153/478 (32%), Gaps = 71/478 (14%) Query: 94 RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFS 153 + + P+ + IP LG++ +V F K+ I + V +T + Sbjct: 98 PAVAQRVEPLFYALAQIPTLGWIPLFMVLFGIDNGLKLA--------VIIKTTVVPLTIN 149 Query: 154 MYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMI 213 Q++ ++P L E + S WQ+ +L +P S+PG + +++S W ++ E++ Sbjct: 150 TQQAVTSVPLMLSEAGKVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELL 209 Query: 214 VVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 + GIG + + L + ++ + + Sbjct: 210 ASSE------GIGYLMVWGRQLFQLDIVFVIIVVVGLSGMIM------------------ 245 Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333 W S V G + + ++ Sbjct: 246 ----------------------------EWAANRACSRLVYWPQPAAGRLAWKPQASWRA 277 Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 L + + + + + Q++ L L ++ R V Sbjct: 278 LQLPVMLLALWQLASQWSWIDSTLFSSPQAVAERFIQGALNGELTAAMLA--SLGRAFVG 335 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 + + G+ + RP P +L + PL+ + V N N Sbjct: 336 GALGIASGLLCGLILALRPRAGKIFTPTLNVLRHIALFAWLPLLTAWVG----NDNGGKI 391 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 + + + + + F+ + EVA + R +ILPG P G A Sbjct: 392 VFIALASFFPMFFSTLQAVRQRNPQLDEVARVLRLGALTRLRSLILPGAAPGIFAGLRLA 451 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 AW +I +E G+G+ + + + P ++ G++++ AL++ Sbjct: 452 LIYAWLGNIGAEYFMSSG-----PGIGSLMINAQQLLDMPTILCGMVLVGITGAALDK 504 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 14/232 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 + P+ + + L + R + + + + A R G + P Sbjct: 303 SSPQAVAERFIQGALNGELTAAMLASLGRAFVGGALGIASGLLCGLILALRPRAGKIFTP 362 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L++++ I + +L + N GK++ LA+ F M FS Q++ Sbjct: 363 TLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFF--------PMFFSTLQAVRQRN 414 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L+EV+R RL + L +P + PG+ + +++ W + +E + Sbjct: 415 PQLDEVARVLRLGALTRLRSLILPGAAPGIFAGLRLALIYAWLGNIGAEYFMSSG----- 469 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 PGIGS + A + D+ IL M+ + D+ R + + + ++R + Sbjct: 470 PGIGSLMINAQQLLDMPTILCGMVLVGITGAALDKA-GRVLELRATRWRQQE 520 Score = 82.7 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 10/162 (6%) Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G P ++ +++P LA P + PL + N ++I T + N Sbjct: 95 GLVPAVAQRVEPLFYALAQIPTLGWIPLFMVLFGI----DNGLKLAVIIKTTVVPLTINT 150 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 ++ P E + + W+ R++++P P + TG A AW + IV E+ + Sbjct: 151 QQAVTSVPLMLSEAGKVMNFSRWQRLRWLVIPASLPGWFTGLRLALSQAWVSLIVVELLA 210 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + G+G + + V + ++++ + + Sbjct: 211 ------SSEGIGYLMVWGRQLFQLDIVFVIIVVVGLSGMIME 246 >gi|293606733|ref|ZP_06689086.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814883|gb|EFF74011.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 280 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 11/216 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 WQ I D + ++ RV+ +A+++ IP+G IG + Sbjct: 67 LWQHIKDPFYDRGPNDKG-IGVQLAYSVARVLTGFSLAALVAIPLGFLIGMSKTVYRAFD 125 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + PL + + + ++ + W +L N G A D+ Sbjct: 126 PFIQVLKPISPLAWMPLALYTIKDADTS----AIFVIFICSLWPMLVNTAFGVGAVRQDW 181 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + ++ R +ILP P +TG + G AW + +E+ G TG+ Sbjct: 182 LNVARTLEVSRLRTALQVILPAAAPTIMTGMRISVGIAWLVIVAAEMLIGG------TGI 235 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 G ++ S ++ +L + + L+ L Sbjct: 236 GYFVWNEWNNLSIANIICAILFIGLIGMLLDTVLAR 271 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+L+ ++ L L S+ + P + +++ I L ++ + Sbjct: 89 LAYSVARVLTGFSLAALVAIPLGFLIGMSKTVYRAFDPFIQVLKPISPLAWMPLALY--- 145 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + A+ +AIF IF +W M + + + +D V+R+ +S + + Sbjct: 146 -----TIKDADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALQVI 200 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM++ G GIG ++ + I+ A Sbjct: 201 LPAAAPTIMTGMRISVGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSIANIICA 254 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + + L D +L R Sbjct: 255 ILFIGLIGMLLDTVLAR 271 >gi|307309035|ref|ZP_07588715.1| nitrate ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306900508|gb|EFN31122.1| nitrate ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 297 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ ++ TL +S L PI +++++P L +L Sbjct: 97 QGLFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL 156 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F + P +AIF IF + +W + + + NIP+D + V++ RL+G++ Sbjct: 157 SLAAFQDGTP--------SAIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNGFE 208 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P + + + + W +VA+EM++ G GIG +I A + Sbjct: 209 YFGKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLI 262 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V FL D+L+ Sbjct: 263 SDIIVALIYVGIVGFLLDRLM 283 Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+ + + +G +G + P Q+L P + PL + Sbjct: 99 LFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSL 158 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W I+ N G P D++ VA + G+ ++ I+ Sbjct: 159 AAFQDGTPS----AIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNGFEYFGKIM 214 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ ++++ Sbjct: 215 LPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISDIIVA 268 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 269 LIYVGIVGFLLDRLM 283 >gi|86136960|ref|ZP_01055538.1| putative nitrate transporter [Roseobacter sp. MED193] gi|85826284|gb|EAQ46481.1| putative nitrate transporter [Roseobacter sp. MED193] Length = 357 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 89/229 (38%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V H TY ++ V +I S+I IP+GI G P ++ I P Q+ Sbjct: 135 VRHRTYTGKPTYYQQIWTSIKTVFFGFLIGSVIAIPLGIMAGLSPTANAAINPIIQIFKP 194 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS + + L ++ + + W L N G ++ D Sbjct: 195 VSPLAWLPIVTMVVSAVYATNDGLFSKSFLVSAITVTLCSLWPTLINTALGVASIDKDLI 254 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ + ++LP P TG + G W I +E+ + + GLG Sbjct: 255 SVSKVLKMSTYSKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S ++++ V + L+R ++ ++ + Sbjct: 309 KFVWDEFQNGSSQSLAKIMVAVFTIGIIGFLLDRIMFALQSMFTFTENR 357 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 12/195 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128 + +I + +A S + PI+ I + + L +L + +Y Sbjct: 157 VFFGFLIGSVIAIPLGIMAGLSPTANAAINPIIQIFKPVSPLAWLPIVTMVVSAVYATND 216 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VS+ ++S + K L +P + Sbjct: 217 GLFSKSFLVSAITVTLCSLWPTLINTALGVASIDKDLISVSKVLKMSTYSKITKLVLPSA 276 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ A+ Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAV 330 Query: 246 LTMLGVIFLYDQLLF 260 T+ + FL D+++F Sbjct: 331 FTIGIIGFLLDRIMF 345 >gi|294341758|emb|CAZ90183.1| Nitrate transporter component [Thiomonas sp. 3As] Length = 304 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 13/218 (5%) Query: 359 IAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + WQS + H Y + + + W ++ RV +A+++ IP+G IG ++ Sbjct: 84 VTWQSAQKVFAHPFYDNGPNDVGIGWNLLASLQRVAYGFGLAALVGIPLGFAIGRVQFLN 143 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P LL + P+ + S N + + W ++ N G Sbjct: 144 RMLSPLISLLRPVSPLAWLPIGLYVFS----NAPAAAIYTIFICSIWPMMINTAIGVQRI 199 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D+ VA ++ W+ + I+LP + PY +TG + G AW + +E+ + G Sbjct: 200 PADYLNVARVLDLSTWKVFTKILLPSVMPYMMTGVRLSVGTAWLVIVAAEMLTGG----- 254 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 TG+G ++ + +++ +L++ + L L Sbjct: 255 -TGIGFWLWNEWNNLNLAHIIIAILVIGVTGMVLEGAL 291 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 14/196 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L + + L +L P++ +++ + L +L Sbjct: 106 GIGWNLLASLQRVAYGFGLAALVGIPLGFAIGRVQFLNRMLSPLISLLRPVSPLAWLPIG 165 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F N A AAI+ IF +W M + + IP D V+R LS W+ Sbjct: 166 LYVFSN--------APAAAIYTIFICSIWPMMINTAIGVQRIPADYLNVARVLDLSTWKV 217 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P MP ++ + +S+ W +VA+EM+ G GIG ++ +L Sbjct: 218 FTKILLPSVMPYMMTGVRLSVGTAWLVIVAAEMLTGGT------GIGFWLWNEWNNLNLA 271 Query: 240 AILYAMLTMLGVIFLY 255 I+ A+L + + Sbjct: 272 HIIIAILVIGVTGMVL 287 >gi|332666518|ref|YP_004449306.1| ABC-type transporter, integral membrane subunit [Haliscomenobacter hydrossis DSM 1100] gi|332335332|gb|AEE52433.1| ABC-type transporter, integral membrane subunit [Haliscomenobacter hydrossis DSM 1100] Length = 334 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 16/213 (7%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 TY + ++ V V + AS + +P+G+ G +I + + P Q+L Sbjct: 118 MTYTGKPTYLDQIITSLKTVFVGFLFASFLALPIGVICGANKNIMTALNPIIQVLKPVSP 177 Query: 431 NVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 + P+V VS ++ + + ++ + + W L N G ++ D+ VA Sbjct: 178 LAWLPIVTMIVSAVYVTNDGFLSKSFIISAVTVAMCSLWATLINTAVGVASVNKDYLNVA 237 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++ + +ILP P TG G W I +E+ + + GLG +I Sbjct: 238 QVLQLSPSQRIFKVILPATLPMIFTGLRITLGVGWMVLIAAEMMA------QNPGLGKFI 291 Query: 544 AESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + + G S +++ VL + AL+R + Sbjct: 292 WDEFQNGSSDSIARIMVAVLTIGLIGYALDRLM 324 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 86/198 (43%), Gaps = 12/198 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + + + ++ + L PI+ +++ + L +L + +Y Sbjct: 133 SLKTVFVGFLFASFLALPIGVICGANKNIMTALNPIIQVLKPVSPLAWLPIVTMIVSAVY 192 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G + + + + + +W + + ++ +D V++ +LS Q+ + + Sbjct: 193 VTNDGFLSKSFIISAVTVAMCSLWATLINTAVGVASVNKDYLNVAQVLQLSPSQRIFKVI 252 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +++ GW ++A+EM+ PG+G +I + + I Sbjct: 253 LPATLPMIFTGLRITLGVGWMVLIAAEMMA------QNPGLGKFIWDEFQNGSSDSIARI 306 Query: 242 LYAMLTMLGVIFLYDQLL 259 + A+LT+ + + D+L+ Sbjct: 307 MVAVLTIGLIGYALDRLM 324 >gi|172035220|ref|YP_001801721.1| bicarbontate transport system permease [Cyanothece sp. ATCC 51142] gi|171696674|gb|ACB49655.1| bicarbontate transport system permease protein [Cyanothece sp. ATCC 51142] Length = 280 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 9/193 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A++I I VGI +G +P I+ + P Q L + P+ + Sbjct: 84 LFWQTLASLGRVAQGYSLAALIGISVGILVGTQPLINKALDPLFQFLRMVAPLAWVPIAL 143 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ W IL N G P D+ V ++ +++ I+ Sbjct: 144 VALQ----QNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNKKFFFKIL 199 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG A G AW A I +E+ G + G+G +I ++ ++ E++L Sbjct: 200 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 254 Query: 559 VLIMCCFVLALNR 571 V+ + L L+R Sbjct: 255 VVYIGAVGLLLDR 267 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 102/252 (40%), Gaps = 22/252 (8%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---------VHSLPQYA 65 I P I +L F+ V +I++ + I L L Sbjct: 29 ILPPIVGVLGFLAVWQLISMTGLIKLPPPSSLWTDERTRILLMYPFYDRGGLDKGLFWQT 88 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ ++ L L + L P+ ++ + L ++ +V Sbjct: 89 LASLGRVAQGYSLAALIGISVGILVGTQPLINKALDPLFQFLRMVAPLAWVPIALVALQQ 148 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P AAIF IF + VW + + + + IP+D V + +LS + F+ + + Sbjct: 149 NQP--------AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNKKFFFKILL 200 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + + +++ W ++A+E+++ G + GIG +I A ++ + I+ A+ Sbjct: 201 PSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILAV 255 Query: 246 LTMLGVIFLYDQ 257 + + V L D+ Sbjct: 256 VYIGAVGLLLDR 267 >gi|126660803|ref|ZP_01731898.1| hypothetical protein CY0110_12367 [Cyanothece sp. CCY0110] gi|126617900|gb|EAZ88674.1| hypothetical protein CY0110_12367 [Cyanothece sp. CCY0110] Length = 280 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 9/193 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A+I+ I VGI +G +P I+ + P Q L + P+ + Sbjct: 84 LFWQTLASLGRVAQGYSLAAIVGISVGILVGTQPLINKALDPLFQFLRMVAPLAWVPIAL 143 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ W IL N G P D+ V ++ +++ I+ Sbjct: 144 VALQ----QNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNRKFFFKIL 199 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG A G AW A I +E+ G + G+G +I ++ ++ E++L Sbjct: 200 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 254 Query: 559 VLIMCCFVLALNR 571 V+ + L L+R Sbjct: 255 VVYIGAVGLLLDR 267 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 105/254 (41%), Gaps = 26/254 (10%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----------HSLPQ 63 I P I +L F++V I++ G+ + P + + L Sbjct: 29 IIPPIVGILGFLIVWQFISM--TGLIKLPPPSSLWTDDRTRTLLMYPFYDRGGLDKGLFW 86 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + R+ ++ + L + L P+ ++ + L ++ +V Sbjct: 87 QTLASLGRVAQGYSLAAIVGISVGILVGTQPLINKALDPLFQFLRMVAPLAWVPIALVAL 146 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 P AAIF IF + VW + + + + IP+D V + +LS + F+ + Sbjct: 147 QQNQP--------AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNRKFFFKI 198 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P + + +++ W ++A+E+++ G + GIG +I A ++ + I+ Sbjct: 199 LLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIIL 253 Query: 244 AMLTMLGVIFLYDQ 257 A++ + V L D+ Sbjct: 254 AVVYIGAVGLLLDR 267 >gi|307151630|ref|YP_003887014.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306981858|gb|ADN13739.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 279 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A+II I VGI +G +P I+ + P Q L + P+ + Sbjct: 83 LFWQTLASLGRVAQGYSLAAIIGISVGILVGTQPLINKALDPIFQFLRMVAPLAWVPIAL 142 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ + W IL N G P D+ V ++ +++ I+ Sbjct: 143 VALQ----QNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKIL 198 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG A G AW A I +E+ G + G+G +I ++ ++ E++L Sbjct: 199 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 253 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L+R + Sbjct: 254 VIYIGAVGLILDRAI 268 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 106/256 (41%), Gaps = 26/256 (10%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----------HSLPQ 63 I P + + F+L+ I+ + G+ + P + + + L Sbjct: 28 IIPPLLGVAGFLLIWQFISTI--GLIKLPPPSSLWTDERTRILLLYPFYDRGGLDKGLFW 85 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + R+ ++ + L + L PI ++ + L ++ +V Sbjct: 86 QTLASLGRVAQGYSLAAIIGISVGILVGTQPLINKALDPIFQFLRMVAPLAWVPIALVAL 145 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 P AAIF IF + VW + + + + IP+D V + +LS + F+ + Sbjct: 146 QQNQP--------AAIFVIFITSVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKI 197 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P + + +++ W ++A+E+++ G + GIG +I A ++ + I+ Sbjct: 198 LLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIIL 252 Query: 244 AMLTMLGVIFLYDQLL 259 A++ + V + D+ + Sbjct: 253 AVIYIGAVGLILDRAI 268 >gi|290559722|gb|EFD93047.1| binding-protein-dependent transport systems inner membrane component [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 379 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 82/399 (20%), Positives = 164/399 (41%), Gaps = 33/399 (8%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + RM A+ +S++ A+S+ L + +P++D++Q++PIL F F V F+ Sbjct: 12 TAYSWTRMFIALFVSIIIGLFTGIAIARSKILNKIFMPVIDVLQTLPILAFFPFAVYLFV 71 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 PG IG A IF I TS +WN+ F YQ++ +P++ ++S+ + L+ +Q+ + Sbjct: 72 FDIPGS-IGINAAVIFLIITSMLWNIIFGAYQAIVALPQEYIDLSKIYDLNLYQRLKKIF 130 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL-PGIGSYIALAIKEQDLLAILY 243 +P ++P + M +S + G F++V SE+ VG + GIG A ++ +Y Sbjct: 131 IPAALPRISEQMSLSWAIGLFYLVTSEIFSVGTKDYAVKHGIGVEFVHAAATGNVTLYIY 190 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 +++ + + L F +N+F L+ ++K R I S Sbjct: 191 SIVIFVLFVIATRLLFFENFEKMANRFYLKS--------------YKKRKLERVIFKS-- 234 Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363 N ++ TL R ++ + F V I Sbjct: 235 NLNKNFITLTGRIKNTLYKNRV------------KKTIKHVSYAIFAFVSAYIIYKLVLI 282 Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 + + + + Y + + RV + + +P+ +++ F + Q Sbjct: 283 VNFSMLYKLAGYEEYSLLSLAFSFIRVWGAFLAILAVSVPLSVYVVFLSKRTKSYMLTFQ 342 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 ++A+ PA + P + V + N L ++ W Sbjct: 343 IIASIPATILLPAIAYIV---YGNSELLAFIIYFLSGLW 378 Score = 98.1 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 4/214 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 + V + R+ + + ++ II + GI I ++ P +L P FFP Sbjct: 5 IFSVFVDTAYSWTRMFIALFVSIIIGLFTGIAIARSKILNKIFMPVIDVLQTLPILAFFP 64 Query: 436 LVVSCVSY---YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V + + N + L+I W I+F A P ++ +++ + + ++ Sbjct: 65 FAVYLFVFDIPGSIGINAAVIFLIITSMLWNIIFGAYQAIVALPQEYIDLSKIYDLNLYQ 124 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG-HIHLRTTGLGAYIAESTEKGS 551 + I +P P + + SE+ S G + G+G + G+ Sbjct: 125 RLKKIFIPAALPRISEQMSLSWAIGLFYLVTSEIFSVGTKDYAVKHGIGVEFVHAAATGN 184 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + ++I FV+A + R Sbjct: 185 VTLYIYSIVIFVLFVIATRLLFFENFEKMANRFY 218 >gi|146339483|ref|YP_001204531.1| nitrate transport permease (nrtB) [Bradyrhizobium sp. ORS278] gi|146192289|emb|CAL76294.1| nitrate transport permease protein (nrtB) [Bradyrhizobium sp. ORS278] Length = 289 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 23/254 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65 RI P + L F++V ++ G R D + D L + Sbjct: 37 RIVPPLIVLALFLIVWELLCRRA-GSALPPPSRVFADTRELIFDPFFDHGGIDKGLFWHL 95 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ I+ + TL +S L PI ++++IP L +L ++ F + Sbjct: 96 EASLRRVAIGYAIAAVVGVALGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPLSLAAFRD 155 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF IF + VW + + + NIP+D V+ +L+ + F + + Sbjct: 156 GQP--------SAIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFVKIMI 207 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P + + + + W +VA+EM++ G GIG +I A + I+ A+ Sbjct: 208 PAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEIILAL 261 Query: 246 LTMLGVIFLYDQLL 259 + + F+ D+L+ Sbjct: 262 FYVGIIGFVLDRLI 275 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + IA+++ + +G IG + P Q+L P + PL + Sbjct: 91 LFWHLEASLRRVAIGYAIAAVVGVALGTLIGQSVWAMRGLDPIFQVLRTIPPLAWLPLSL 150 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VA+ + ++ I+ Sbjct: 151 AAFRDGQPS----AIFVIFITSVWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFVKIM 206 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG G +W A + +E+ G G+G +I ++ E++L Sbjct: 207 IPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIILA 260 Query: 559 VLIMCCFVLALNRFL 573 + + L+R + Sbjct: 261 LFYVGIIGFVLDRLI 275 >gi|332716622|ref|YP_004444088.1| nitrate transport permease protein nrtB [Agrobacterium sp. H13-3] gi|325063307|gb|ADY66997.1| nitrate transport permease protein nrtB [Agrobacterium sp. H13-3] Length = 297 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + +++ RV +A+I I +G IG + P Q+L P + Sbjct: 94 SQDIGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSIWAMRGLDPIFQVLRTVPPLAW 153 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL ++ + N ++ + W ++ N G P D++ VA + + Sbjct: 154 LPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQIEF 209 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I+LP PY TG G +W A + +E+ + G G+G +I ++ P Sbjct: 210 FFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLP 263 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++++ + + L++ + Sbjct: 264 DIIVALAYIGVVGFMLDKLV 283 Score = 160 bits (406), Expect = 5e-37, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 23/259 (8%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HS 60 +R I P L + V ++ G + + + + Sbjct: 40 AAAARNIIPPFVVLAVLLGVWQVLCS-APGSSLPPPSQVFEESYDLIVSPFFHNGSQDIG 98 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + R+ ++ + + + +S L PI +++++P L +L ++ Sbjct: 99 LGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSIWAMRGLDPIFQVLRTVPPLAWLPLSL 158 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 F + P +AIF IF + +W + + + NIP+D V++ RL+ + F Sbjct: 159 AAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQIEFF 210 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 211 FKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLPD 264 Query: 241 ILYAMLTMLGVIFLYDQLL 259 I+ A+ + V F+ D+L+ Sbjct: 265 IIVALAYIGVVGFMLDKLV 283 >gi|299770156|ref|YP_003732182.1| sulfate ester permease protein [Acinetobacter sp. DR1] gi|298700244|gb|ADI90809.1| sulfate ester permease protein [Acinetobacter sp. DR1] Length = 535 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 93/569 (16%), Positives = 192/569 (33%), Gaps = 72/569 (12%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVP----ITLDVHS 60 P FIS F ++ L + ++ + Q + + Sbjct: 18 TKKPWFISVGYFNSLAIYWIVPLCLFLLWWVASNEQWMPAQILPTPKDTWHSFVEIASQD 77 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + + R ++ +L L SR L + IP L +L + Sbjct: 78 LWSQLAISLERFGLGLLSGVLGGVFLGILLGYSRIAEQYLSATFYALVIIPTLAWLPLLM 137 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++ K IF IF + + + + +I L+E++ + + Sbjct: 138 IWLGIENSLK--------IFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLL 189 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 L +P ++P + ++++ GW ++A E++ + GIG + + L Sbjct: 190 TKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASSE------GIGYLMVTGRQLFQLDI 243 Query: 241 ILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGY 300 + + + V ++D +L R +ER +P + + F K N Sbjct: 244 VFVTIFVIASVGIIFDFILHR----------IERKFVFWPHAALSAHTFHKKNRSDVFK- 292 Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 ++ PLS V + WF ++ + Sbjct: 293 ---SWVLPLSLVVLWAVSS----------------------------WFNLISSQILPAP 321 Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W+ + + + + +++R ++ +II +I VGI +G I + + P Sbjct: 322 WKVLEALWSGI---QDFSLTTAMYYSLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAP 378 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 L + PL+ + L+ + + T + + G S+ P Sbjct: 379 TLNTLRLIAIFAWIPLLTAWFGLEDLSK----IVFISIATFFPMFIATWKGMSSIPMQLV 434 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 EV+S+ +T + +ILP I P G A +W AS +E I G+G Sbjct: 435 EVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMGSGI-----GIG 489 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 +Y+ + + V+ +++ L Sbjct: 490 SYMMAAQQNFEMERVIAATVLVAGLGAIL 518 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 21/243 (8%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIW---------LGCITMFRVVV 392 L I+W +C + + ++ T +D + I++ R + Sbjct: 32 LAIYWIVPLCLFLLWWVASNEQWMPAQILPTPKDTWHSFVEIASQDLWSQLAISLERFGL 91 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 ++ + + +GI +G+ + L P + PL++ + N Sbjct: 92 GLLSGVLGGVFLGILLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIE----NSLK 147 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 ++ T I + AG KE+A+ ++LP PY+ TG Sbjct: 148 IFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRL 207 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A W + I E+ + + G+G + + V + + ++ + + Sbjct: 208 AVAAGWTSLIAVELLA------SSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFI 261 Query: 573 LWH 575 L Sbjct: 262 LHR 264 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 96/237 (40%), Gaps = 14/237 (5%) Query: 23 LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L+ V++ + + + P +++ + + SL + R + ++I L Sbjct: 298 LSLVVLWAVSSWFNLISSQILPAPWKVLEALWSGIQDFSLTTAMYYSLYRAILGLIIGGL 357 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + + + +L P L+ ++ I I ++ +F +L+ I Sbjct: 358 IGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLE--------DLSKIVF 409 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + M + ++ + +IP L EVS + R++ Q+ L +P P + +++ Sbjct: 410 ISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALL 469 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 W +E ++ GIGSY+ A + ++ ++ A + + G+ + L Sbjct: 470 YSWMASFGAEYLMGSGI-----GIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWL 521 >gi|254447035|ref|ZP_05060502.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [gamma proteobacterium HTCC5015] gi|198263174|gb|EDY87452.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [gamma proteobacterium HTCC5015] Length = 340 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 88/225 (39%), Gaps = 18/225 (8%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y + +++ V ++A++I IP+GI G ++S + P Q+ Sbjct: 115 VRIRDYTGQPTFVDQIFTSLYTVFTGFLLAALISIPLGILCGLSEKVNSALNPLIQVFKP 174 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +++ + L ++ + + W L N G S+ D Sbjct: 175 VSPLAWLPIVTMVVSAVYVSDDPMLEKSFLTSAITVTLCSLWPALINTTVGVSSISEDLI 234 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + + ++LP P TG + G W I +E+ + + GLG Sbjct: 235 NVSRVLRLKWYTKIYKVVLPAAMPMMFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 288 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNR--FLWHPLYLY 580 ++ + + G S +++ V + L+R + + Y Sbjct: 289 KFVWDEFQNGSSSSLGRIMVAVFTIGFIGFLLDRVMLILQRFFSY 333 Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 86/199 (43%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + +++ L + L S ++ L P++ + + + L +L + +Y Sbjct: 133 SLYTVFTGFLLAALISIPLGILCGLSEKVNSALNPLIQVFKPVSPLAWLPIVTMVVSAVY 192 Query: 128 PGKVIGAE---LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E L + + +W + + +I DL VSR RL + K + + Sbjct: 193 VSDDPMLEKSFLTSAITVTLCSLWPALINTTVGVSSISEDLINVSRVLRLKWYTKIYKVV 252 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P +MP + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 253 LPAAMPMMFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLGRI 306 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+ T+ + FL D+++ Sbjct: 307 MVAVFTIGFIGFLLDRVML 325 >gi|192360346|ref|YP_001980534.1| putative nitrate transport system permease [Cellvibrio japonicus Ueda107] gi|190686511|gb|ACE84189.1| possible nitrate transport system permease protein [Cellvibrio japonicus Ueda107] Length = 275 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 11/211 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW+ + D I LG +++RV+ +A I IPVG IG P + + Sbjct: 62 AWEQLSNPFYDAGPNDKGIGIQLGY-SIYRVLTGFSLALFIAIPVGFLIGMSPLMYRALN 120 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P+ Q+L + PL + + + ++ + W +L N G + D+ Sbjct: 121 PYIQVLRPISPLAWMPLALFIIKDSETS----AIFVIFICSIWPMLLNTAFGVANVREDW 176 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + ++ R +ILP P +TG + G AW + +E+ G TG+ Sbjct: 177 INVARTHELSPLRTAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG------TGI 230 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G Y+ V+ +L++ + L+ Sbjct: 231 GYYVWNEWNNLDLTSVIFSILMIGLVGMLLD 261 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 14/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+L+ ++L L S + L P + +++ I L ++ + Sbjct: 84 LGYSIYRVLTGFSLALFIAIPVGFLIGMSPLMYRALNPYIQVLRPISPLAWMPLALFIIK 143 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + +E +AIF IF +W M + + N+ D V+R+ LS + + + Sbjct: 144 D--------SETSAIFVIFICSIWPMLLNTAFGVANVREDWINVARTHELSPLRTAFTVI 195 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG Y+ DL +++++ Sbjct: 196 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFS 249 Query: 245 MLTMLGVIFLYDQLL 259 +L + V L D L Sbjct: 250 ILMIGLVGMLLDLAL 264 >gi|117617477|ref|YP_857899.1| nitrate transporter component [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117558884|gb|ABK35832.1| nitrate transporter component [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 314 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 16/214 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V+ +A++I IP G+ +G + P QLL Sbjct: 89 VKLRPYTGRPTFFDQIGTSLLTVLCGFGLATLIAIPCGVLLGMNQGLYRAANPVIQLLKP 148 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + P++ VS + +P WL+ L + + W L N G + D Sbjct: 149 VSPLAWLPIITLVVSALYASPTPWLAKSFLTSALTVTLCSLWPTLINTAVGVAGLDRDLH 208 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ R I+LPG P TG + G AW I +E+ + + GLG Sbjct: 209 NVSRVLRLSFVTHVRRIVLPGALPMIFTGLRLSLGVAWMVLIAAEMLA------QNPGLG 262 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNR 571 ++ + + G S +++ V+ + AL+R Sbjct: 263 KFVWDEFQSGGSASLARIMVAVITIGLIGCALDR 296 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 84/210 (40%), Gaps = 14/210 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + L +L ++ L L ++ L P++ +++ + L +L + LY Sbjct: 107 SLLTVLCGFGLATLIAIPCGVLLGMNQGLYRAANPVIQLLKPVSPLAWLPIITLVVSALY 166 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + L + + +W + + + RDL VSR RLS + Sbjct: 167 ASPTPWLAKSFLTSALTVTLCSLWPTLINTAVGVAGLDRDLHNVSRVLRLSFVTHVRRIV 226 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 227 LPGALPMIFTGLRLSLGVAWMVLIAAEMLA------QNPGLGKFVWDEFQSGGSASLARI 280 Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVWSNK 269 + A++T+ + D+ L + + W + Sbjct: 281 MVAVITIGLIGCALDRGMLALQQWLSWDKR 310 >gi|154245032|ref|YP_001415990.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154159117|gb|ABS66333.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 362 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 16/217 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y + ++ V + +IA++I +P+GI G + I P Q+ Sbjct: 140 VKQRAYTGKPTYVDQIFTSLVTVGLGFLIATVIAVPLGIASGLSKTFAGAINPLVQIFKP 199 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWL-------SLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS +L+P+ + ++ + + W L N G ++ D Sbjct: 200 VSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSLWPTLINTALGVASIDKDLV 259 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V ++ R ++LP P TG + G W I +E+ + + GLG Sbjct: 260 NVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 313 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW 574 ++ + + G S +++ VL + L+R ++ Sbjct: 314 KFVWDEFQNGSSDSLARIMVAVLTIGIIGFMLDRIMY 350 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 84/198 (42%), Gaps = 12/198 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + +I+ + + S+ + P++ I + + L +L + LY Sbjct: 158 SLVTVGLGFLIATVIAVPLGIASGLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALY 217 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 V + + + + +W + + +I +DL V + +LS L Sbjct: 218 LDPSAAVPKSLVISAVTVTLCSLWPTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLV 277 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 278 LPSSLPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLARI 331 Query: 242 LYAMLTMLGVIFLYDQLL 259 + A+LT+ + F+ D+++ Sbjct: 332 MVAVLTIGIIGFMLDRIM 349 >gi|260432057|ref|ZP_05786028.1| binding-protein-dependent transport systems inner membrane component [Silicibacter lacuscaerulensis ITI-1157] gi|260415885|gb|EEX09144.1| binding-protein-dependent transport systems inner membrane component [Silicibacter lacuscaerulensis ITI-1157] Length = 360 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V +IA++I +P+GI G P ++ + P Q+ Sbjct: 138 VKQVAYTGAPSYYQQIWTSIKTVFFGFLIATVIAVPLGIAAGLSPTANAALNPLIQVFKP 197 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS ++ + L ++ + + W L N G ++ D Sbjct: 198 VSPLAWLPIVTMIVSAVYVTNDGLFAKSFLISAITVTLCSLWPTLINTSLGVASIDKDLV 257 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + W ++LP P TG + G W I +E+ + + GLG Sbjct: 258 NVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S +++ V + L+R ++ L+ + Sbjct: 312 KFVWDEFQNGSSSSLARIMVAVFTIGIIGFLLDRVMYTLQSLFTFTNNR 360 Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 83/194 (42%), Gaps = 12/194 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY---P 128 + +I+ + A S L P++ + + + L +L + +Y Sbjct: 160 VFFGFLIATVIAVPLGIAAGLSPTANAALNPLIQVFKPVSPLAWLPIVTMIVSAVYVTND 219 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VS+ +++ W K L +P + Sbjct: 220 GLFAKSFLISAITVTLCSLWPTLINTSLGVASIDKDLVNVSKVLKMNTWTKITKLVLPSA 279 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + L I+ A+ Sbjct: 280 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLARIMVAV 333 Query: 246 LTMLGVIFLYDQLL 259 T+ + FL D+++ Sbjct: 334 FTIGIIGFLLDRVM 347 >gi|332529362|ref|ZP_08405323.1| nitrate ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] gi|332041160|gb|EGI77525.1| nitrate ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 325 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 10/197 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV + +A+++ IPVG IG +S P LL + P+ + Sbjct: 127 VGWNVLTSLQRVALGFGLAALVGIPVGFLIGRFEFLSRMCNPIISLLRPVSPLAWLPIGL 186 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA ++ W+ I+ Sbjct: 187 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLQLSEWKVITKIL 242 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 243 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 296 Query: 559 VLIMCCFVLALNRFLWH 575 ++++ L L L Sbjct: 297 IVMIGVVGLLLEIALIR 313 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 14/205 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L L + L + PI+ +++ + L +L ++ Sbjct: 129 WNVLTSLQRVALGFGLAALVGIPVGFLIGRFEFLSRMCNPIISLLRPVSPLAWLPIGLLV 188 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R +LS W+ Sbjct: 189 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLQLSEWKVITK 240 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 241 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 294 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267 A++ + V L + L R ++ Sbjct: 295 IAIVMIGVVGLLLEIALIRLASAFT 319 >gi|332306314|ref|YP_004434165.1| binding-protein-dependent transport systems inner membrane component [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173643|gb|AEE22897.1| binding-protein-dependent transport systems inner membrane component [Glaciecola agarilytica 4H-3-7+YE-5] Length = 329 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 16/211 (7%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + +++ V V +IAS+I +P+GI G + I P QLL Sbjct: 109 FTGAPTFFDQIWTSLYTVTVGFLIASVIAVPLGIICGLSKASYAAINPLIQLLKPVSPLA 168 Query: 433 FFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + PLV VS +++ + + ++ + W L N G S+ +D V+ Sbjct: 169 WLPLVTMVVSAVYVSDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLLNVSKV 228 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + + I++P P TG + G W I +E+ + + GLG ++ + Sbjct: 229 LRLGPFSHVMKIVMPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWD 282 Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + G S +++ VL + AL+R + Sbjct: 283 EFQNGSSESLARIMVAVLTIGLIGFALDRLM 313 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 82/199 (41%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +I+ + + S+ + P++ +++ + L +L + +Y Sbjct: 122 SLYTVTVGFLIASVIAVPLGIICGLSKASYAAINPLIQLLKPVSPLAWLPLVTMVVSAVY 181 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + + +W + + +I DL VS+ RL + + Sbjct: 182 VSDDPMFSKSFITSAVTVSLCCLWPTLINTAVGVSSIDSDLLNVSKVLRLGPFSHVMKIV 241 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 242 MPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 295 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+LT+ + F D+L+ Sbjct: 296 MVAVLTIGLIGFALDRLML 314 >gi|218441576|ref|YP_002379905.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218174304|gb|ACK73037.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 279 Score = 161 bits (407), Expect = 4e-37, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A+II I VGI +G +P I+ + P Q L + P+ + Sbjct: 83 LFWQTLASLGRVAQGYSLAAIIGIGVGILVGTQPLINKALDPIFQFLRMVAPLAWVPIAL 142 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ W IL N G P D+ V ++ +++ I+ Sbjct: 143 VALQ----QNQPAAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKIL 198 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG A G AW A I +E+ G + G+G +I ++ ++ E++L Sbjct: 199 LPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 253 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L+R + Sbjct: 254 VIYIGAVGLILDRAI 268 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 107/256 (41%), Gaps = 26/256 (10%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----------HSLPQ 63 I P + + F+LV +I+ + GI + P + + + L Sbjct: 28 IIPPLVGVAGFLLVWQLISSV--GIIKLPPPSSLWTDERTRILLLYPFYDRGGLDKGLFW 85 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + R+ ++ + L + L PI ++ + L ++ +V Sbjct: 86 QTLASLGRVAQGYSLAAIIGIGVGILVGTQPLINKALDPIFQFLRMVAPLAWVPIALVAL 145 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 P AAIF IF + VW + + + + IP+D V + +LS + F+ + Sbjct: 146 QQNQP--------AAIFVIFITAVWPILINTTEGVKQIPQDYINVQQVLQLSNQKFFFKI 197 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P + + +++ W ++A+E+++ G + GIG +I A ++ + I+ Sbjct: 198 LLPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIIL 252 Query: 244 AMLTMLGVIFLYDQLL 259 A++ + V + D+ + Sbjct: 253 AVIYIGAVGLILDRAI 268 >gi|17230370|ref|NP_486918.1| bicarbonate transport permease protein [Nostoc sp. PCC 7120] gi|17131972|dbj|BAB74577.1| bicarbonate transport permease protein [Nostoc sp. PCC 7120] Length = 279 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + A+++ I +GI IG +S + P QLL P + P+ + Sbjct: 81 LFWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVPPLAWVPISL 140 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W IL N G P D+ VA ++ ++ I+ Sbjct: 141 AALR----QNEPAALFVIFITAIWPILINTAVGVKEIPQDYNNVAKVLQLSKKEYFLNIL 196 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG A G AW A I +E+ G + G+G +I ++ + E++L Sbjct: 197 IPAALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNYISEIILA 251 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L++ + Sbjct: 252 LVYIGAVGLLLDKLM 266 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 91/201 (45%), Gaps = 13/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + R+ + + + ++ + L P+ +++++P L ++ Sbjct: 79 KGLFWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVPPLAWVPI 138 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ P AA+F IF + +W + + + IP+D V++ +LS + Sbjct: 139 SLAALRQNEP--------AALFVIFITAIWPILINTAVGVKEIPQDYNNVAKVLQLSKKE 190 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P + + +++ W ++A+E+++ G + GIG +I A + + Sbjct: 191 YFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNYI 245 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V L D+L+ Sbjct: 246 SEIILALVYIGAVGLLLDKLM 266 >gi|186682670|ref|YP_001865866.1| nitrate ABC transporter inner membrane subunit [Nostoc punctiforme PCC 73102] gi|186465122|gb|ACC80923.1| nitrate ABC transporter, inner membrane subunit [Nostoc punctiforme PCC 73102] Length = 279 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I+ I +G+ IG +S + P QLL P + P+ + Sbjct: 81 LFWQILASLQRVAISYTLAAIVGIGLGVLIGVNKTMSKALDPIFQLLRTVPPLAWVPISL 140 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W IL N G + P D+ VA ++ ++ I+ Sbjct: 141 AALR----QNEPAALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNIL 196 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG A G AW A I +E+ G + G+G +I ++ + + EV+L Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQNNNVSEVILA 251 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L++ + Sbjct: 252 LVYIGVVGLLLDKAM 266 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 107/255 (41%), Gaps = 24/255 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---------HSLPQY 64 + P + F+++ + + P ++ + + L Sbjct: 27 DLIPPAIAISIFLVLWQLFAWVPGAT--LPGPIQVIQDTWVLIFWPFYDRGGIDKGLFWQ 84 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ + ++ + L ++ + L PI +++++P L ++ ++ Sbjct: 85 ILASLQRVAISYTLAAIVGIGLGVLIGVNKTMSKALDPIFQLLRTVPPLAWVPISLAALR 144 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 P AA+F IF + +W + + + IP+D V++ +LS + F + Sbjct: 145 QNEP--------AALFVIFITAIWPILINTAVGVTQIPQDYNNVAKVLQLSRKEYFTNIL 196 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + + +++ W ++A+E+++ G + GIG +I A + ++ ++ A Sbjct: 197 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQNNNVSEVILA 251 Query: 245 MLTMLGVIFLYDQLL 259 ++ + V L D+ + Sbjct: 252 LVYIGVVGLLLDKAM 266 >gi|330501505|ref|YP_004378374.1| putative nitrate transport system permease [Pseudomonas mendocina NK-01] gi|328915791|gb|AEB56622.1| possible nitrate transport system permease protein [Pseudomonas mendocina NK-01] Length = 278 Score = 160 bits (406), Expect = 5e-37, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ ++A+++ IP+G IG P + + PF Q+L + PL + + Sbjct: 90 SLYRVLTGYLLAALVAIPIGFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIKDSQ 149 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ + W +L N G + D+ VA + ++ R +I+P P Sbjct: 150 TS----AIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVIVPAAMPT 205 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ G TG+G Y+ + V+ +L++ Sbjct: 206 ILTGMRISVGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLNLASVIFSILMIGVV 259 Query: 566 VLALNRFL 573 + L+ L Sbjct: 260 GMLLDLLL 267 Score = 146 bits (369), Expect = 9e-33, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 14/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+L+ +++ L + S + L P + I++ I L ++ + Sbjct: 87 LAHSLYRVLTGYLLAALVAIPIGFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIK 146 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + ++ +AIF IF VW M + + + RD V+R+ LS + + + Sbjct: 147 D--------SQTSAIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVI 198 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VP +MP ++ M +S+ W +VA+EM+V G GIG Y+ +L +++++ Sbjct: 199 VPAAMPTILTGMRISVGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLNLASVIFS 252 Query: 245 MLTMLGVIFLYDQLL 259 +L + V L D LL Sbjct: 253 ILMIGVVGMLLDLLL 267 >gi|296112268|ref|YP_003626206.1| nitrate ABC transporter permease protein NrtB [Moraxella catarrhalis RH4] gi|295919962|gb|ADG60313.1| nitrate ABC transporter permease protein NrtB [Moraxella catarrhalis RH4] gi|326560738|gb|EGE11106.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 46P47B1] gi|326561778|gb|EGE12113.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 7169] gi|326562282|gb|EGE12608.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 103P14B1] gi|326564740|gb|EGE14953.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 12P80B1] gi|326568997|gb|EGE19066.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis BC1] gi|326569297|gb|EGE19358.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis BC7] gi|326574534|gb|EGE24475.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis CO72] gi|326575485|gb|EGE25410.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis 101P30B1] gi|326577899|gb|EGE27763.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis O35E] Length = 294 Score = 160 bits (406), Expect = 5e-37, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW I D I LG ++ RV++ +A I+ IP+G IG P + S Sbjct: 81 AWVHISDPFYDKGLNDKGIGIQLGY-SIGRVLLGFFLAMIVAIPLGYAIGMSPVLGSAAT 139 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + P+ + + + N ++ + W +L N G ++ ++ Sbjct: 140 PFVQILKPISPLAWMPIALYTIK----DSNASSIFVIFICSIWPMLTNTAFGVASVRREW 195 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + ++ + I++P P VTG + G AW + +E+ G TG+ Sbjct: 196 RNVAKTLELSPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEMLVGG------TGI 249 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G ++ S V+ VL++ + L+ Sbjct: 250 GYFVWNQWNNLSLANVIFAVLLIGLMGMILDMLF 283 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 14/205 (6%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 L+ + + R+L ++++ S LG P + I++ I L Sbjct: 93 GLNDKGIGIQLGYSIGRVLLGFFLAMIVAIPLGYAIGMSPVLGSAATPFVQILKPISPLA 152 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 ++ + + + ++IF IF +W M + + ++ R+ V+++ L Sbjct: 153 WMPIALY--------TIKDSNASSIFVIFICSIWPMLTNTAFGVASVRREWRNVAKTLEL 204 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 S + + +P + P +V M +SM W +VA+EM+V G GIG ++ Sbjct: 205 SPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNQWN 258 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259 L +++A+L + + + D L Sbjct: 259 NLSLANVIFAVLLIGLMGMILDMLF 283 >gi|120553119|ref|YP_957470.1| binding-protein-dependent transport systems inner membrane component [Marinobacter aquaeolei VT8] gi|120322968|gb|ABM17283.1| binding-protein-dependent transport systems inner membrane component [Marinobacter aquaeolei VT8] Length = 330 Score = 160 bits (406), Expect = 5e-37, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y + ++ V+ +AS+I +P+GI G + + + P Q+ Sbjct: 110 VRIRAYPGAPTFLDQVVTSLLTVLAGFALASLIAVPLGIVFGLNRYFQAAVNPLIQIFKP 169 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS +++ + L + + + W L N G +A D Sbjct: 170 VSPLAWLPLVTMVVSATYVSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVAAVNPDLL 229 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ ++ W R ++LP P TG + G AW I +E+ + ++ GLG Sbjct: 230 NVSRVLRLSFWTHVRKVVLPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLG 283 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S +++ VL + L+R + Sbjct: 284 KFVWDEFQNGSSQSLSRIMVAVLAIGFIGFLLDRVM 319 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 14/209 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + L +L+ ++ L + +R + P++ I + + L +L + Y Sbjct: 128 SLLTVLAGFALASLIAVPLGIVFGLNRYFQAAVNPLIQIFKPVSPLAWLPLVTMVVSATY 187 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + L ++ + +W + + + DL VSR RLS W + Sbjct: 188 VSDDPMFEKSFLTSMITVTLCSLWPTLINTSVGVAAVNPDLLNVSRVLRLSFWTHVRKVV 247 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241 +P S+P + + +S+ W ++A+EM+ PG+G ++ + Q L I Sbjct: 248 LPSSVPMIFTGLRVSLGIAWMVLIAAEMLA------QSPGLGKFVWDEFQNGSSQSLSRI 301 Query: 242 LYAMLTMLGVIFLYDQ--LLFRPMIVWSN 268 + A+L + + FL D+ LL + + W+ Sbjct: 302 MVAVLAIGFIGFLLDRVMLLIQRKVAWNE 330 >gi|149201150|ref|ZP_01878125.1| binding-protein-dependent transport systems inner membrane component [Roseovarius sp. TM1035] gi|149145483|gb|EDM33509.1| binding-protein-dependent transport systems inner membrane component [Roseovarius sp. TM1035] Length = 356 Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 88/229 (38%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V +IA+ + +P+GI G P ++ + P Q+ Sbjct: 134 VRERPYTGSPTYYAQIWTSVQTVFFGFLIATAVAVPLGIAAGLSPTANAALNPLIQIFKP 193 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS ++ + L ++ + + W L N G ++ D Sbjct: 194 VSPLAWLPIVTMVVSAVYVTQDGLFSRSFLTSAITVTLCSLWPTLINTSLGVASIDRDLI 253 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ +T W ++LP P TG + G W I +E+ + + GLG Sbjct: 254 SVSRVLKLTTWTKITRLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 307 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S ++++ V + L+R ++ L+ + Sbjct: 308 KFVWDEFQNGSSTSLAKIMVAVFTIGIIGFLLDRLMYAAQSLFTFSDNR 356 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 12/198 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +I+ A S L P++ I + + L +L + +Y Sbjct: 152 SVQTVFFGFLIATAVAVPLGIAAGLSPTANAALNPLIQIFKPVSPLAWLPIVTMVVSAVY 211 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G + L + + +W + + +I RDL VSR +L+ W K L Sbjct: 212 VTQDGLFSRSFLTSAITVTLCSLWPTLINTSLGVASIDRDLISVSRVLKLTTWTKITRLV 271 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 272 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSTSLAKI 325 Query: 242 LYAMLTMLGVIFLYDQLL 259 + A+ T+ + FL D+L+ Sbjct: 326 MVAVFTIGIIGFLLDRLM 343 >gi|114705670|ref|ZP_01438573.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Fulvimarina pelagi HTCC2506] gi|114538516|gb|EAU41637.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Fulvimarina pelagi HTCC2506] Length = 364 Score = 160 bits (405), Expect = 7e-37, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 16/202 (7%) Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 ++ V + ++A+II +PVGI G I+ + P Q+ + P+V V Sbjct: 156 QIMTSLQTVFLGFLLATIIAVPVGIACGLSSTINGALNPLIQIFKPVSPLAWLPIVTMIV 215 Query: 442 SYYHLNPNLWL-------SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 S ++N + L ++ + + W L N G ++ D V ++ + Sbjct: 216 SALYVNASDALPKSMVVSAITVTLCSLWPTLINTSLGVASIDKDLVNVGKVLQLSTAKTI 275 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---S 551 ++LP P TG + G W I +E+ + + GLG ++ + + G S Sbjct: 276 TKLVLPSAMPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDS 329 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 +++ V+ + L+R + Sbjct: 330 LARIIVAVITIGIVGFILDRIM 351 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 83/200 (41%), Gaps = 12/200 (6%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + + +++ + S + L P++ I + + L +L + Sbjct: 158 MTSLQTVFLGFLLATIIAVPVGIACGLSSTINGALNPLIQIFKPVSPLAWLPIVTMIVSA 217 Query: 126 LYPGK---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 LY + + + + + +W + + +I +DL V + +LS + Sbjct: 218 LYVNASDALPKSMVVSAITVTLCSLWPTLINTSLGVASIDKDLVNVGKVLQLSTAKTITK 277 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLL 239 L +P +MP + + +S+ GW ++A+EM+ PG+G ++ + L Sbjct: 278 LVLPSAMPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSDSLA 331 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++T+ V F+ D+++ Sbjct: 332 RIIVAVITIGIVGFILDRIM 351 >gi|16262759|ref|NP_435552.1| nitrate ABC transporter permease [Sinorhizobium meliloti 1021] gi|14523389|gb|AAK64964.1| Nitrate transporter, permease [Sinorhizobium meliloti 1021] Length = 297 Score = 160 bits (404), Expect = 7e-37, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ ++ TL +S L PI +++++P L +L Sbjct: 97 QGLFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL 156 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F + P +AIF IF + +W + + + NIP+D + V++ RL+ ++ Sbjct: 157 SLAAFQDGTP--------SAIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFE 208 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P + + + + W +VA+EM++ G GIG +I A + Sbjct: 209 YFGKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLI 262 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V FL D+L+ Sbjct: 263 SDIIVALIYVGIVGFLLDRLI 283 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 80/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+ + + +G +G + P Q+L P + PL + Sbjct: 99 LFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSL 158 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W I+ N G P D++ VA + + ++ I+ Sbjct: 159 AAFQDGTPS----AIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIM 214 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ ++++ Sbjct: 215 LPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISDIIVA 268 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 269 LIYVGIVGFLLDRLI 283 >gi|32470875|ref|NP_863868.1| nitrate transport permease protein [Rhodopirellula baltica SH 1] gi|32443020|emb|CAD71541.1| nitrate transport permease protein [Rhodopirellula baltica SH 1] Length = 371 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 19/229 (8%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 ++ + +FT I ++ V +A+I+ +PVG+ G P ++ Sbjct: 134 ALSLKKRAVAAANFTPSSAPTFIDQIWTSVKTVFFGFFLATIVAVPVGVLCGMSPWFNAA 193 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL----------MIFGTQWYILFN 467 + PF Q+ + PL + +Y+ + + + + W L N Sbjct: 194 MTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFFNKAFLISASTVCLCSLWPTLVN 253 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 G ++ DF VA ++ W+ IILP P G + G W I +++ Sbjct: 254 TTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPLMFAGMRISLGVGWMVLIAADML 313 Query: 528 SWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIMCCFVLALNRFL 573 + + GLG ++ + + GS + + V+++ L L+R + Sbjct: 314 A------QNPGLGKFVWDEFQNGSELTYARIAFSVIVIGLIGLVLDRIM 356 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 85/208 (40%), Gaps = 17/208 (8%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 + ++ + L S + P + I + + L +L + M Y G Sbjct: 166 VFFGFFLATIVAVPVGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYS 225 Query: 132 IG------AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G A L + + +W + + ++ +D V+ RLS WQ+ + + Sbjct: 226 SGETFFNKAFLISASTVCLCSLWPTLVNTTLGVASVDKDFINVADVLRLSWWQRLTKIIL 285 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD---LLAIL 242 P S+P + M +S+ GW ++A++M+ PG+G ++ + I Sbjct: 286 PASLPLMFAGMRISLGVGWMVLIAADMLA------QNPGLGKFVWDEFQNGSELTYARIA 339 Query: 243 YAMLTMLGVIFLYDQLL--FRPMIVWSN 268 ++++ + + + D+++ FR ++ + N Sbjct: 340 FSVIVIGLIGLVLDRIMIFFRNLVSFGN 367 >gi|254487030|ref|ZP_05100235.1| nitrate ABC transporter, permease component [Roseobacter sp. GAI101] gi|214043899|gb|EEB84537.1| nitrate ABC transporter, permease component [Roseobacter sp. GAI101] Length = 357 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 18/211 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ V +IAS++ IP+GI G ++ + P Q+ + P+V VS + Sbjct: 153 SIKTVFFGFLIASLVAIPLGIAAGLSKTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVY 212 Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + L ++ + + W L N G S+ D V+ + W ++ Sbjct: 213 ASNDGMFSKSFLISAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTWTKITKLV 272 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 LP P TG + G W I +E+ + + GLG ++ + + G S ++ Sbjct: 273 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 326 Query: 556 VLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ V + L+R ++ ++ + Sbjct: 327 MVAVFTIGIIGFLLDRVMFALQSMFTFSANR 357 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 12/195 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128 + +I+ L A S+ L P++ I + + L +L + +Y Sbjct: 157 VFFGFLIASLVAIPLGIAAGLSKTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYASND 216 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VSR +++ W K L +P + Sbjct: 217 GMFSKSFLISAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTWTKITKLVLPSA 276 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ A+ Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKIMVAV 330 Query: 246 LTMLGVIFLYDQLLF 260 T+ + FL D+++F Sbjct: 331 FTIGIIGFLLDRVMF 345 >gi|326571973|gb|EGE21978.1| nitrate ABC transporter, inner membrane subunit [Moraxella catarrhalis BC8] Length = 294 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW I D I LG ++ RV++ +A I+ IP+G IG P + S Sbjct: 81 AWVHISDPFYDKGLNDKGIGIQLGY-SIGRVLLGFFLAMIVAIPLGYAIGMSPVLGSAAT 139 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + P+ + + + N ++ + W +L N G ++ ++ Sbjct: 140 PFVQILKPISPLAWMPIALYTIK----DSNASSIFVIFICSIWPMLTNTAFGVASVRREW 195 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + ++ + I++P P VTG + G AW + +E+ G TG+ Sbjct: 196 RNVAKTLELSPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEMLVGG------TGI 249 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G ++ S V+ VL++ + L+ Sbjct: 250 GYFVWNQWNNLSLANVIFAVLLIGLMGMILDMLF 283 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 14/205 (6%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 L+ + + R+L ++++ S LG P + I++ I L Sbjct: 93 GLNDKGIGIQLGYSIGRVLLGFFLAMIVAIPLGYAIGMSPVLGSAATPFVQILKPISPLA 152 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 ++ + + + ++IF IF +W M + + ++ R+ V+++ L Sbjct: 153 WMPIALY--------TIKDSNASSIFVIFICSIWPMLTNTAFGVASVRREWRNVAKTLEL 204 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 S + + +P + P +V M +SM W +VA+EM+V G GIG ++ Sbjct: 205 SPLKTATKIVIPAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNQWN 258 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259 L +++A+L + + + D L Sbjct: 259 NLSLANVIFAVLLIGLMGMILDMLF 283 >gi|242238796|ref|YP_002986977.1| binding-protein-dependent transporters inner membrane component [Dickeya dadantii Ech703] gi|242130853|gb|ACS85155.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech703] Length = 564 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 85/530 (16%), Positives = 166/530 (31%), Gaps = 71/530 (13%) Query: 41 ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100 + V ++L LP + + R+ ++ +L + L SRR +L Sbjct: 86 QILPAPQQVVATAVSLLQGDLPSHLLISLQRLGGGLLAGVLAGTLLGALMGASRRAEQLL 145 Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P + + IP LG++ F +V F K+ + + + +T + + + Sbjct: 146 YPTVYTLAQIPTLGWIPFFMVLFGIDDGLKLA--------VLIKAVIVPVTLHSQRGVRD 197 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 +P L E + RL + L +P ++P + +++S W ++ E++ Sbjct: 198 VPPTLREAAAVLRLPLPTRLLRLTLPAALPVWFTGLRLALSQAWVSLIVVELLASSQ--- 254 Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280 GIG + + L + + + L + Sbjct: 255 ---GIGYLMVWGRQLFQLDIVFVCIAAIGATGLLMEW----------------------- 288 Query: 281 ADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340 RF + +P+ R + L S R Sbjct: 289 ------------GINRFDHHLIRWPHAPVGRLTHTPGRPAIGLMLPLLLLVLWHLSCSRD 336 Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 W A + Q++ V T D ++FR + II Sbjct: 337 -------WVDATLLPAPALVVQTLWRGVLDGTLPD------AMLHSLFRALTGGIIGVST 383 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 GI +G + P LL + PL+ + N + Sbjct: 384 GWLAGIALGLSTRAEALFAPSLSLLRQVALFAWLPLITAWAG----NDEGGKVTFVALAA 439 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 + +L G +EVA + R +ILPG P TG + AW Sbjct: 440 FFPMLVASHRGVRQRSAALQEVAQILRLPLSARLRVLILPGAAPAMFTGLRLSLIHAWLG 499 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 ++ +E G+G+ + + + P ++ G+L++ + L+ Sbjct: 500 TVGAEYFMSSG-----AGIGSLMINAQQLMEMPIILSGMLLIGLTGVLLD 544 >gi|227819750|ref|YP_002823721.1| Nitrate transport permease NrtB [Sinorhizobium fredii NGR234] gi|227338749|gb|ACP22968.1| Nitrate transport permease protein NrtB [Sinorhizobium fredii NGR234] Length = 297 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ ++ L +S L PI +++++P L +L Sbjct: 97 QGLFWHVFASLQRVALGYAMAAAVGIALGVLVGQSALAMRGLDPIFQVLRTVPPLAWLPL 156 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F + P +AIF IF + +W + + + NIP+D + V+R RL+G++ Sbjct: 157 SLAAFQDGNP--------SAIFVIFITAIWPIIINTAVGIRNIPQDYQNVARVLRLNGFE 208 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P + + + + W +VA+EM++ G GIG +I A + Sbjct: 209 YFAKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLI 262 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V FL D+L+ Sbjct: 263 SDIIVALIYVGIVGFLLDRLI 283 Score = 159 bits (402), Expect = 2e-36, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 83/195 (42%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+ + I +G+ +G + P Q+L P + PL + Sbjct: 99 LFWHVFASLQRVALGYAMAAAVGIALGVLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSL 158 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ W I+ N G P D++ VA + G+ ++ I+ Sbjct: 159 AAFQDGNPS----AIFVIFITAIWPIIINTAVGIRNIPQDYQNVARVLRLNGFEYFAKIM 214 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ ++++ Sbjct: 215 LPAAAPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISDIIVA 268 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 269 LIYVGIVGFLLDRLI 283 >gi|149926963|ref|ZP_01915221.1| possible nitrate transport system permease protein [Limnobacter sp. MED105] gi|149824184|gb|EDM83404.1| possible nitrate transport system permease protein [Limnobacter sp. MED105] Length = 282 Score = 160 bits (404), Expect = 9e-37, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 11/216 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W I D I LG ++FRV+V +A+++ IP+G IG P + + Sbjct: 69 LWGHISDPFYDRGTNDKGIGIQLGY-SIFRVLVGFGLAALVAIPLGFVIGMSPLLYKALD 127 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + PL + + + ++ + W +L N G + D+ Sbjct: 128 PFIQILKPVSPLAWMPLALYTIQDSDTS----AIFVIFICSIWPMLVNTAFGVAGVRRDW 183 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + ++ R +ILP P +TG + G AW + +E+ G TG+ Sbjct: 184 LNVAKTLEVSSLRTAFQVILPAAAPTIMTGMRISVGIAWLVIVAAEMLVGG------TGI 237 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 G ++ S ++ +L + + L+ L Sbjct: 238 GYFVWNEWNNLSIANIISAILFIGLIGMLLDTLLAR 273 Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+L ++ L + S L L P + I++ + L ++ + Sbjct: 91 LGYSIFRVLVGFGLAALVAIPLGFVIGMSPLLYKALDPFIQILKPVSPLAWMPLALYTIQ 150 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + ++ +AIF IF +W M + + + RD V+++ +S + + + Sbjct: 151 D--------SDTSAIFVIFICSIWPMLVNTAFGVAGVRRDWLNVAKTLEVSSLRTAFQVI 202 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG ++ + I+ A Sbjct: 203 LPAAAPTIMTGMRISVGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSIANIISA 256 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + + L D LL R Sbjct: 257 ILFIGLIGMLLDTLLAR 273 >gi|13472532|ref|NP_104099.1| nitrate transporter component, nrtB [Mesorhizobium loti MAFF303099] gi|14023278|dbj|BAB49885.1| nitrate transporter component; NrtB [Mesorhizobium loti MAFF303099] Length = 298 Score = 159 bits (403), Expect = 9e-37, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 111/292 (38%), Gaps = 23/292 (7%) Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 ++ I + F + + + R P ++ V ++ I VV Sbjct: 3 IQAIEDTKVKAFPAPAKPAEVIAFAAKARRRFDPLAIAGKLASTLVPPVIVIALMLVVWQ 62 Query: 355 VAIGI----------AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIW 401 VA W ++ H + + + W I++ RV + +A+I+ Sbjct: 63 VACSSPTSSLPPPSQVWNEAYDLIAHPFFDNGPQDIGLAWRVLISLQRVAIGFGLAAIVG 122 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 + +G +G + P Q+L P + PL ++ + + ++ + Sbjct: 123 VALGALVGQSIWAMRGLDPVFQILRTVPPLAWLPLSLAAFR----DSSPSALFVIFITSI 178 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 W I+ N G P D++ VA + + ++ I++P PY TG G +W A Sbjct: 179 WPIIINTAVGVRNIPQDYRNVARILRLNPFEFFVKIMVPAAAPYIFTGLRIGIGLSWLAI 238 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ + G G+G +I ++ P++++ + + L+R + Sbjct: 239 VAAEMLTGG------VGIGFFIWDAWNSSRLPDIIVALAYIGVTGFCLDRLV 284 Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + L +S L P+ I++++P L +L + Sbjct: 99 GLAWRVLISLQRVAIGFGLAAIVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAWLPLS 158 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +A+F IF + +W + + + NIP+D V+R RL+ ++ Sbjct: 159 LAAFRDSSP--------SALFVIFITSIWPIIINTAVGVRNIPQDYRNVARILRLNPFEF 210 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + VP + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 211 FVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 264 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + F D+L+ Sbjct: 265 DIIVALAYIGVTGFCLDRLV 284 >gi|282898853|ref|ZP_06306840.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] gi|281196380|gb|EFA71290.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] Length = 279 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 10/214 (4%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W+ I Y D + W ++ RV + +A+++ I +GI IG +S + Sbjct: 64 TWELIIYPFYDRGGIDKG-LFWQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALD 122 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P QLL P + P+ ++ + ++ + W IL N G P D+ Sbjct: 123 PLFQLLRTVPPLAWVPISLAALR----QNEPAALFVIFITSLWPILINTAVGVKEIPVDY 178 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA ++ ++ +++P PY TG + G AW A I +E+ G + G+ Sbjct: 179 NNVAKVLQLSQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GI 233 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ + EV+L ++ + L L++F+ Sbjct: 234 GFFIWDAYQANKVSEVILALVYIGVVGLLLDKFM 267 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 118/265 (44%), Gaps = 22/265 (8%) Query: 4 YNILPPFISRR---IFPNIFDLLAFVLVIGIINIL---LHGIQETTVPRDIVDIVPITLD 57 N++ FI+++ I P ++AF++V + +++ L G + + I P Sbjct: 16 ENLILAFINKKMPEIIPPFIAIVAFLVVWQVFSLVGGTLPGPIQVVQDTWELIIYPFYDR 75 Query: 58 VH---SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 L + R+ + ++ + L + + L P+ +++++P L Sbjct: 76 GGIDKGLFWQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALDPLFQLLRTVPPLA 135 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 ++ ++ P AA+F IF + +W + + + IP D V++ +L Sbjct: 136 WVPISLAALRQNEP--------AALFVIFITSLWPILINTAVGVKEIPVDYNNVAKVLQL 187 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 S + F+ + +P ++P + + +S+ W ++A+E+++ G + GIG +I A + Sbjct: 188 SQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQ 242 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259 + ++ A++ + V L D+ + Sbjct: 243 ANKVSEVILALVYIGVVGLLLDKFM 267 >gi|37521656|ref|NP_925033.1| bicarbonate transport system permease protein [Gloeobacter violaceus PCC 7421] gi|35212654|dbj|BAC90028.1| cmpB [Gloeobacter violaceus PCC 7421] Length = 278 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+ + I VGI IG I S + P Q+L P + P+ + Sbjct: 82 LFWQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLPISL 141 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W I+ N G P D+ VA ++ +++ ++ Sbjct: 142 AAIQ----QSEPAAIFVIFITAIWPIIINTAVGVQQIPQDYNNVARVLQLSRPKYFFKVL 197 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ E+VL Sbjct: 198 LPAALPYIFTGLKIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAYNSAKVSEIVLA 251 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L++ + Sbjct: 252 LVYVGLVGLLLDKLV 266 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ ++ V L + + L P+ ++++IP L +L Sbjct: 80 QGLFWQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLPI 139 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ P AAIF IF + +W + + + IP+D V+R +LS + Sbjct: 140 SLAAIQQSEP--------AAIFVIFITAIWPIIINTAVGVQQIPQDYNNVARVLQLSRPK 191 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F+ + +P ++P + + + + W +VA+EM++ G GIG +I A + Sbjct: 192 YFFKVLLPAALPYIFTGLKIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAYNSAKV 245 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V L D+L+ Sbjct: 246 SEIVLALVYVGLVGLLLDKLV 266 >gi|110833713|ref|YP_692572.1| nitrate ABC transporter permease [Alcanivorax borkumensis SK2] gi|110646824|emb|CAL16300.1| nitrate ABC transporter permease protein [Alcanivorax borkumensis SK2] Length = 333 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 16/211 (7%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Y ++ V+ ++AS+I IP+GI IG + + P QL Sbjct: 113 YTGAPTFFDQIGTSLITVMSGFLLASLIAIPLGIVIGLSSTAYAAMNPLIQLFKPVSPLA 172 Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + PLV VS ++ + ++ + W L N G ++ D V+ Sbjct: 173 WLPLVTMVVSALYVTDDPMVAKSFLTSMFTVSLCCLWPTLMNTSVGVTSVSQDLTNVSLV 232 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + R I+LP P TG + G AW I +E+ + + GLG ++ + Sbjct: 233 LRLNALSHIRKIVLPSALPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWD 286 Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + G S +++ V+++ L+R + Sbjct: 287 EFQNGSSQSLGRIMVAVIVIGLIGFLLDRLM 317 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 86/199 (43%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + ++S +++ L + S + P++ + + + L +L + LY Sbjct: 126 SLITVMSGFLLASLIAIPLGIVIGLSSTAYAAMNPLIQLFKPVSPLAWLPLVTMVVSALY 185 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 V + L ++F + +W + + ++ +DL VS RL+ + Sbjct: 186 VTDDPMVAKSFLTSMFTVSLCCLWPTLMNTSVGVTSVSQDLTNVSLVLRLNALSHIRKIV 245 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241 +P ++P + + +S+ W ++A+EM+ PG+G ++ + Q L I Sbjct: 246 LPSALPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLGRI 299 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A++ + + FL D+L+ Sbjct: 300 MVAVIVIGLIGFLLDRLML 318 >gi|253687824|ref|YP_003017014.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754402|gb|ACT12478.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 537 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 87/549 (15%), Positives = 179/549 (32%), Gaps = 71/549 (12%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 LA + + I + ++V + L + L + R+ S ++ LL Sbjct: 41 LALLALWYISTHYGWMPAQILPAPNVVANTAVELWHNDLLPQLFISLQRLASGLLAGLLA 100 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + L SRR +L P + + IP LG++ +V F K+ I Sbjct: 101 GTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFMVLFGIDDGLKLA--------VI 152 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +T + N+P L+EV+ + RL Q+ L +P ++P + + +++S Sbjct: 153 IKAVIIPVTLHTQTGVRNVPHALQEVAHTLRLPWHQRLIKLTLPAALPTWLTGLRLALSQ 212 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 W ++ E++ GIG + + L + + + + Sbjct: 213 AWVSLIVVELLASSQ------GIGYLLVWGRQLFQLDIVFVCIAVIGLAGLAME------ 260 Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGV 322 W + + + PLS R L Sbjct: 261 ---------------------WTINQLERR--------LVFWPHPPLSRLTAAPSRRLSA 291 Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 + F L +++ W + W + V+ + + + Sbjct: 292 LVLPFLLLLLWQQASRFG-------WIDPLLLPPPADVWHMLRQGVHDGSLTEAMQ---- 340 Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 ++ R + + + + G+ +G + P L + PL+ + V Sbjct: 341 --ASLTRALAGAVCGIVAGLVGGVLLGLSATSDALFTPTVATLRQIALFAWLPLLTAWVG 398 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 N + + + +L G +EVA + R +ILPG Sbjct: 399 ----NDEAGKITFVTLASFFPMLVASHRGIRQRSQALQEVAQVLQLRLSTRLRVLILPGA 454 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P G + AW +I +E TG+G+ + + + P ++ G+L++ Sbjct: 455 APAIFAGLRLSLIYAWLGTIGAEYFMSSG-----TGIGSLMINAQQLLDMPLIISGMLLI 509 Query: 563 CCFVLALNR 571 L+R Sbjct: 510 GLTGAVLDR 518 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 90/228 (39%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P D+ ++ + SL + + R L+ V ++ V L S + Sbjct: 316 LPPPADVWHMLRQGVHDGSLTEAMQASLTRALAGAVCGIVAGLVGGVLLGLSATSDALFT 375 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + ++ I + +L + N GK+ LA+ F M + ++ + Sbjct: 376 PTVATLRQIALFAWLPLLTAWVGNDEAGKITFVTLASFF--------PMLVASHRGIRQR 427 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L+EV++ +L + L +P + P + + +S+ W + +E + T Sbjct: 428 SQALQEVAQVLQLRLSTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT--- 484 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266 GIGS + A + D+ I+ ML + + D++ L + M W Sbjct: 485 --GIGSLMINAQQLLDMPLIISGMLLIGLTGAVLDRVGLGLEQRMTRW 530 Score = 86.9 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 87/260 (33%), Gaps = 28/260 (10%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL----------- 377 N R ++ +V + + +A ++ YI H+ + Sbjct: 11 ANIWPALPTARAYSLVVPRIVSLVVPLIVPLALLALWYISTHYGWMPAQILPAPNVVANT 70 Query: 378 -------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 ++ I++ R+ ++ + +G +G + P LA P Sbjct: 71 AVELWHNDLLPQLFISLQRLASGLLAGLLAGTLLGALMGASRRAEHLLHPTVYALAQIPT 130 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + + ++I + + G P+ +EVA + + Sbjct: 131 LGWIPLFMVLFGI----DDGLKLAVIIKAVIIPVTLHTQTGVRNVPHALQEVAHTLRLPW 186 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + + LP P ++TG A AW + IV E+ + + G+G + + Sbjct: 187 HQRLIKLTLPAALPTWLTGLRLALSQAWVSLIVVELLA------SSQGIGYLLVWGRQLF 240 Query: 551 SFPEVVLGVLIMCCFVLALN 570 V + + ++ LA+ Sbjct: 241 QLDIVFVCIAVIGLAGLAME 260 >gi|16330083|ref|NP_440811.1| nitrate transport protein NrtB [Synechocystis sp. PCC 6803] gi|2501376|sp|P73451|NRTB_SYNY3 RecName: Full=Nitrate transport permease protein nrtB gi|1652570|dbj|BAA17491.1| nitrate transport protein; NrtB [Synechocystis sp. PCC 6803] Length = 275 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 10/192 (5%) Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 ++ RV V A+++ I +GI IG + + P Q+L P + P+ ++ + Sbjct: 81 QIFASLTRVAVGFSAAAVVGIALGILIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAAL 140 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 + ++ W I+ N GA P D++ V+ ++ +++ I+ P Sbjct: 141 QEAEPS----AIFVIFITAIWPIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPA 196 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 PY TG G +W A + +E+ G G+G +I ++ E+++ ++ Sbjct: 197 AVPYIFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAYNSSLISEIIIALIY 250 Query: 562 MCCFVLALNRFL 573 + L L+RF+ Sbjct: 251 VGIVGLLLDRFI 262 Score = 157 bits (397), Expect = 6e-36, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 22/245 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYASRTTLRMLS 74 +A +LV+ I G + + + P+ L+ L + R+ Sbjct: 32 IAVLLVVWQILCSGEGSNLPSPVQVLEQTYPLILNPFFDNGGTDKGLGIQIFASLTRVAV 91 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 + + L S+ + L PI ++++IP L +L + P Sbjct: 92 GFSAAAVVGIALGILIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAALQEAEP------ 145 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 +AIF IF + +W + + +P+D VSR +LS Q F+ + P ++P + Sbjct: 146 --SAIFVIFITAIWPIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPAAVPYIFT 203 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + + + W +VA+EM++ G GIG +I A + I+ A++ + V L Sbjct: 204 GLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAYNSSLISEIIIALIYVGIVGLL 257 Query: 255 YDQLL 259 D+ + Sbjct: 258 LDRFI 262 >gi|282896008|ref|ZP_06304039.1| Nitrate transport permease [Raphidiopsis brookii D9] gi|281199118|gb|EFA73988.1| Nitrate transport permease [Raphidiopsis brookii D9] Length = 279 Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 10/214 (4%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W+ I Y D + W ++ RV + +A+++ I +GI IG +S + Sbjct: 64 TWELIIYPFYDRGGIDKG-LFWQVFASLQRVAISYTLAAVVGIGLGILIGVNTTMSKALD 122 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P QLL P + P+ ++ + ++ + W IL N G P D+ Sbjct: 123 PLFQLLRTVPPLAWVPISLAALR----QNEPAALFVIFITSLWPILINTAVGVKEIPVDY 178 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA ++ ++ +++P PY TG + G AW A I +E+ G + G+ Sbjct: 179 NNVAKVLQLSQKEYFFNVLIPAALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GI 233 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I +S + EV+L ++ + L L++F+ Sbjct: 234 GFFIWDSYQANKVSEVILALVYIGVVGLLLDKFM 267 Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 110/251 (43%), Gaps = 19/251 (7%) Query: 15 IFPNIFDLLAFVLVIGIINIL---LHGIQETTVPRDIVDIVPITLDVH---SLPQYASRT 68 I P + ++AF++V + ++ L G + + I P L + Sbjct: 30 ILPPLIAIVAFLVVWQVFSLTGGTLPGPIQVVQDTWELIIYPFYDRGGIDKGLFWQVFAS 89 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ + ++ + L + + L P+ +++++P L ++ ++ P Sbjct: 90 LQRVAISYTLAAVVGIGLGILIGVNTTMSKALDPLFQLLRTVPPLAWVPISLAALRQNEP 149 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 AA+F IF + +W + + + IP D V++ +LS + F+ + +P + Sbjct: 150 --------AALFVIFITSLWPILINTAVGVKEIPVDYNNVAKVLQLSQKEYFFNVLIPAA 201 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + +S+ W ++A+E+++ G + GIG +I + + + ++ A++ + Sbjct: 202 LPYIFTGLRISIGLAWLAIIAAEIVMSG-----IVGIGFFIWDSYQANKVSEVILALVYI 256 Query: 249 LGVIFLYDQLL 259 V L D+ + Sbjct: 257 GVVGLLLDKFM 267 >gi|192290788|ref|YP_001991393.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas palustris TIE-1] gi|192284537|gb|ACF00918.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris TIE-1] Length = 279 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ I D I LG ++ RV+ ++A ++ IP+G IG P ++ Sbjct: 62 VGAKLWEHIKRPFYDNGPNDKGLGIQLGY-SIARVMTGYLLAVLVAIPLGFLIGMSPLMN 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + +L ++ + W +L N G ++ Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLLNTAFGVASV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWINVARTLEVGTVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSIVNVIIAILMIGLVGMLLDQVLAR 270 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 93/205 (45%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + L + R+++ ++++L L S + L P + +++ I L ++ Sbjct: 80 NDKGLGIQLGYSIARVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWM 139 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + + L+AIF IF VW M + + ++ ++ V+R+ + Sbjct: 140 PLALY--------TIKDSSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGT 191 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++ + + +P + P ++ M +S+ W +VA+EM+V G GIG ++ Sbjct: 192 VRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 ++ ++ A+L + V L DQ+L R Sbjct: 246 SIVNVIIAILMIGLVGMLLDQVLAR 270 >gi|85704275|ref|ZP_01035378.1| putative nitrate transporter [Roseovarius sp. 217] gi|85671595|gb|EAQ26453.1| putative nitrate transporter [Roseovarius sp. 217] Length = 358 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 18/211 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ V +IA+++ +P+GI G P ++ + P Q+ + P+V VS Sbjct: 154 SIQTVFFGFLIATVVAVPLGIAAGLSPIANAALNPLIQIFKPVSPLAWLPIVTMIVSALA 213 Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ + + W L N G ++ D V+ + W ++ Sbjct: 214 ASNDGVFAKSFVISAVTVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLV 273 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 LP P TG + G W I +E+ + + GLG +I + + G S + Sbjct: 274 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSSLARI 327 Query: 556 VLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ VL + L+R ++ L+ + Sbjct: 328 MVAVLSIGIIGFLLDRVMYALQSLFTFTNNR 358 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 84/198 (42%), Gaps = 12/198 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL- 126 + + +I+ + A S L P++ I + + L +L + L Sbjct: 154 SIQTVFFGFLIATVVAVPLGIAAGLSPIANAALNPLIQIFKPVSPLAWLPIVTMIVSALA 213 Query: 127 --YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G + + + + +W + + +I +DL VS+ +++ W K L Sbjct: 214 ASNDGVFAKSFVISAVTVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLV 273 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P ++P + + +S+ GW ++A+EM+ PG+G +I + L I Sbjct: 274 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSSLARI 327 Query: 242 LYAMLTMLGVIFLYDQLL 259 + A+L++ + FL D+++ Sbjct: 328 MVAVLSIGIIGFLLDRVM 345 >gi|327542553|gb|EGF29027.1| nitrate ABC transporter permease protein [Rhodopirellula baltica WH47] Length = 371 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 19/229 (8%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 ++ + +FT I ++ V +A+I+ +PVG+ G P ++ Sbjct: 134 ALSLKKRAVAAANFTPSSAPTFIDQIWTSVKTVFFGFFLATIVAVPVGVLCGMSPWFNAA 193 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL----------MIFGTQWYILFN 467 + PF Q+ + PL + +Y+ + + + + W L N Sbjct: 194 MTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYSSGETFFNKAFLISASTVCLCSLWPTLVN 253 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 G ++ DF VA ++ W+ IILP P G + G W I +++ Sbjct: 254 TTLGVASVDKDFINVADVLRLSWWQRLTKIILPASLPLMFAGMRISLGVGWMVLIAADML 313 Query: 528 SWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIMCCFVLALNRFL 573 + + GLG ++ + + GS + + V+++ L L+R + Sbjct: 314 A------QNPGLGKFVWDEFQNGSELTYARIAFSVIVIGMIGLVLDRIM 356 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 85/208 (40%), Gaps = 17/208 (8%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 + ++ + L S + P + I + + L +L + M Y G Sbjct: 166 VFFGFFLATIVAVPVGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLAFIVIMWYYAGYS 225 Query: 132 IG------AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 G A L + + +W + + ++ +D V+ RLS WQ+ + + Sbjct: 226 SGETFFNKAFLISASTVCLCSLWPTLVNTTLGVASVDKDFINVADVLRLSWWQRLTKIIL 285 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD---LLAIL 242 P S+P + M +S+ GW ++A++M+ PG+G ++ + I Sbjct: 286 PASLPLMFAGMRISLGVGWMVLIAADMLA------QNPGLGKFVWDEFQNGSELTYARIA 339 Query: 243 YAMLTMLGVIFLYDQLL--FRPMIVWSN 268 ++++ + + + D+++ FR ++ + N Sbjct: 340 FSVIVIGMIGLVLDRIMIFFRNLVSFGN 367 >gi|260426707|ref|ZP_05780686.1| binding-protein-dependent transport systems inner membrane component [Citreicella sp. SE45] gi|260421199|gb|EEX14450.1| binding-protein-dependent transport systems inner membrane component [Citreicella sp. SE45] Length = 394 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 85/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V +I S + IP+GI G P+ +S I P Q+ Sbjct: 172 VKDVAYTGAPSYYEQIWTSIKTVFFGFLIGSCVAIPLGILAGLSPYANSAINPLVQIFKP 231 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V +S + L ++ + + W L N G ++ D Sbjct: 232 VSPLAWLPIVTMIISAAVATNDGLFSKSFLISAITVTLCSLWPTLINTALGVASIDKDLV 291 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + W ++LP P TG + G W I +E+ + + GLG Sbjct: 292 NVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 345 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S ++++ V + L+R ++ L+ + Sbjct: 346 KFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMFALQSLFTFSNNR 394 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 12/195 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYP 128 + +I LA S + P++ I + + L +L + + Sbjct: 194 VFFGFLIGSCVAIPLGILAGLSPYANSAINPLVQIFKPVSPLAWLPIVTMIISAAVATND 253 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VS+ +++ W K L +P + Sbjct: 254 GLFSKSFLISAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSA 313 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + L I+ A+ Sbjct: 314 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLAKIMVAV 367 Query: 246 LTMLGVIFLYDQLLF 260 T+ + FL D+++F Sbjct: 368 FTIGIIGFLLDRVMF 382 >gi|260464097|ref|ZP_05812291.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259030082|gb|EEW31364.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 296 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 92/214 (42%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 A+ I + + QD+ + W I++ RV + +A+++ + +G +G + Sbjct: 80 AYDLIAHPFFNNGPQDIG-LAWRVLISLQRVAIGFGMAAVVGVALGALVGQSIWAMRGLD 138 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL ++ + + ++ + W I+ N G P D+ Sbjct: 139 PVFQILRTVPPLAWLPLSLAAFR----DSSPSALFVIFITSIWPIIINTAVGVRNIPQDY 194 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + ++ I++P PY TG G +W A + +E+ + G G+ Sbjct: 195 RNVARILRLNPLEFFIKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGI 248 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ P++++ + + L+R + Sbjct: 249 GFFIWDAWNSSRLPDIIVALAYIGVTGFCLDRLV 282 Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + L +S L P+ I++++P L +L + Sbjct: 97 GLAWRVLISLQRVAIGFGMAAVVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAWLPLS 156 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +A+F IF + +W + + + NIP+D V+R RL+ + Sbjct: 157 LAAFRDSSP--------SALFVIFITSIWPIIINTAVGVRNIPQDYRNVARILRLNPLEF 208 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + VP + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 209 FIKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 262 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + F D+L+ Sbjct: 263 DIIVALAYIGVTGFCLDRLV 282 >gi|188584197|ref|YP_001927642.1| nitrate ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179347695|gb|ACB83107.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium populi BJ001] Length = 286 Score = 158 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 115/257 (44%), Gaps = 23/257 (8%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62 ++ R+ P + L F+L+ ++ R + + I +D L Sbjct: 31 VAARVLPPLVVLAGFLLLWEVLCSSPTAGL-PPPSRVVTEAWDIIVDPFYDNGGTDKGLF 89 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + S + R+ ++++ + TL +S L PI ++++IP L +L ++ Sbjct: 90 WHISASLQRVALGFALAVVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSLAA 149 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + P +AIF IF + +W + + + NIP+D V+ RL+ + F+ Sbjct: 150 FRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFYK 201 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P + P + + + + W +VA+EM++ G GIG +I A + I+ Sbjct: 202 IMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEII 255 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + + F+ D+L+ Sbjct: 256 VALVYVGLIGFVLDRLV 272 Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A + + +G +G + P Q+L P + PL + Sbjct: 88 LFWHISASLQRVALGFALAVVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSL 147 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VA+ + ++ I+ Sbjct: 148 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFYKIM 203 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ E+++ Sbjct: 204 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 257 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 258 LVYVGLIGFVLDRLV 272 >gi|226942957|ref|YP_002798030.1| ABC transporter permease [Azotobacter vinelandii DJ] gi|226717884|gb|ACO77055.1| ABC transporter, permease component [Azotobacter vinelandii DJ] Length = 528 Score = 158 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 72/553 (13%), Positives = 170/553 (30%), Gaps = 73/553 (13%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L + + ++ P +V + L L ++ + R+ ++ + Sbjct: 32 AGIFLAWSLASHFGWMSRQVLPPPSLVWQTLLELGGGELWEHLGISLRRLALGLLAGVAA 91 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + + RL + P + +P L ++ +++F E + + Sbjct: 92 GALLGATLGANARLERLAYPTFASLAQVPTLAWIPLFMLFFGIG--------EALKLVVL 143 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + V +T + + L E + RL+ + W L VP ++P + + +++S Sbjct: 144 IKAVVVPVTVHTLVGVRDTQPRLREAAAVLRLAPHLRLWRLTVPAALPSFMAGLRIALST 203 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LL 259 W ++A E++ + GIG + + L + +L + + L D+ LL Sbjct: 204 AWSSLLAVELLASSE------GIGYLMVWGRQLFMLDIVFVCILAIGLLGVLMDKGIALL 257 Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319 R ++ W + L FR+ + + +L + Sbjct: 258 DRRLLFWPH---------------PPLAEFRRRHIKSDWQRLEPWLLPLALLGLWQLACS 302 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 I + + + + W ++ G +S+G + L + Sbjct: 303 RQWIDANILVAPIAVLHS---------IWSGLLDGSLGEALARSLGRALGGLLLGGGLGL 353 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 + ++R + P +L + PL+ + Sbjct: 354 AMGILLGLWR-----------------------PGERLLGPTLGVLRHVAIFAWVPLITA 390 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + F T + + G + E A + ++L Sbjct: 391 WFGLGEA----AKLVFVAFATFFPLFIATRRGIANLSPQLDEAARVLRLNHRLRLTRLVL 446 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 PG P G A AW +I +E G+G+ + + + ++ + Sbjct: 447 PGAAPAIFAGLRLALIYAWLGTIGAEYFMPSD-----GGIGSLMIAAQQLFQMDRIMAAM 501 Query: 560 LIMCCFVLALNRF 572 ++ +N Sbjct: 502 SLIGLTGALINTL 514 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 90/230 (39%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ + L SL + +R+ R L +++ L R +L Sbjct: 311 LVAPIAVLHSIWSGLLDGSLGEALARSLGRALGGLLLGGGLGLAMGILLGLWRPGERLLG 370 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L +++ + I ++ +F K++ A F +F + + + N+ Sbjct: 371 PTLGVLRHVAIFAWVPLITAWFGLGEAAKLVFVAFATFFPLF--------IATRRGIANL 422 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L+E +R RL+ + L +P + P + + +++ W + +E + D Sbjct: 423 SPQLDEAARVLRLNHRLRLTRLVLPGAAPAIFAGLRLALIYAWLGTIGAEYFMPSD---- 478 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + + I+ AM + L + L + + + ++R Sbjct: 479 -GGIGSLMIAAQQLFQMDRIMAAMSLIGLTGALINTL-GQLIEARATRWR 526 >gi|145589179|ref|YP_001155776.1| nitrate ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047585|gb|ABP34212.1| nitrate ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 286 Score = 158 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + ++ RV + ++A I+ IP G WIG P PF Q+L + P+ + Sbjct: 91 IGIQLAYSLARVALGFLLAMIVAIPFGFWIGMSPLAYEAFNPFIQILKPISPLAWMPIAL 150 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ + W +L N G + + VA + ++ R +I Sbjct: 151 YTIK----DSAISGIFVIFICSVWPMLLNTAFGVANVRKELLNVAKTLEVSPLRKAFLVI 206 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG + G AW + +E+ G TG+G ++ S V+ Sbjct: 207 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFLWNEWNNLSLSSVIFA 260 Query: 559 VLIMCCFVLALN 570 +L++ + L+ Sbjct: 261 ILLIGIVGMLLD 272 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ +++++ + S P + I++ I L ++ + Sbjct: 95 LAYSLARVALGFLLAMIVAIPFGFWIGMSPLAYEAFNPFIQILKPISPLAWMPIALY--- 151 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ IF IF VW M + + N+ ++L V+++ +S +K + + Sbjct: 152 -----TIKDSAISGIFVIFICSVWPMLLNTAFGVANVRKELLNVAKTLEVSPLRKAFLVI 206 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA+EM+V G GIG ++ L ++++A Sbjct: 207 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFLWNEWNNLSLSSVIFA 260 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + V L D + Sbjct: 261 ILLIGIVGMLLDTAFGK 277 >gi|171060512|ref|YP_001792861.1| nitrate ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170777957|gb|ACB36096.1| nitrate ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 331 Score = 158 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 13/217 (5%) Query: 360 AWQSIGYIVNHFTYQDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 W++ + + Y + + W ++ RV + +A+++ IP+G IG ++ Sbjct: 115 VWEAAVKLFSDPFYSNGPNDQGIGWNVLSSLQRVAMGFGLAALVGIPLGFMIGRFNFLNQ 174 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + P LL + P+ + N + + W ++ N G P Sbjct: 175 MLDPLISLLRPVSPLAWLPIGLMVFQAA----NPAAIWTIFICSIWPMVINTAVGVRQVP 230 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D+ VA ++ W R I+ P + PY +TG A G AW + +E+ + G Sbjct: 231 QDYLNVARVLELSEWTVMRKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGQ----- 285 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G ++ + + +++ + ++ LAL L Sbjct: 286 -GIGFWLWDEWNNLNVAHILIAIFVIGGVGLALEALL 321 Score = 150 bits (379), Expect = 7e-34, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 21/253 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-------LDVHSLPQYAS 66 ++ F+L+ +++ P + + + + Sbjct: 83 KVLAPAVGFALFLLLWQAVSLAGDKQLPGPAPVWEAAVKLFSDPFYSNGPNDQGIGWNVL 142 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++ L + + L +L P++ +++ + L +L ++ F Sbjct: 143 SSLQRVAMGFGLAALVGIPLGFMIGRFNFLNQMLDPLISLLRPVSPLAWLPIGLMVFQAA 202 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P AAI+ IF +W M + + +P+D V+R LS W + P Sbjct: 203 NP--------AAIWTIFICSIWPMVINTAVGVRQVPQDYLNVARVLELSEWTVMRKILFP 254 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +P ++ + +++ W +VA+EM+ G GIG ++ ++ IL A+ Sbjct: 255 AVLPYMLTGVRLAVGTAWLVIVAAEMLTGGQ------GIGFWLWDEWNNLNVAHILIAIF 308 Query: 247 TMLGVIFLYDQLL 259 + GV + LL Sbjct: 309 VIGGVGLALEALL 321 >gi|83309635|ref|YP_419899.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Magnetospirillum magneticum AMB-1] gi|82944476|dbj|BAE49340.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Magnetospirillum magneticum AMB-1] Length = 368 Score = 158 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 89/224 (39%), Gaps = 18/224 (8%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + ++ V + ++A+I+ +P+G+ G I++ + P Q+ Sbjct: 151 FTGKPTYLDQIATSLKTVFMGFVLATIVAVPLGVMCGLSKTINAALNPLIQIFKPVSPLA 210 Query: 433 FFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + P+V VS + + L ++ + + W L N G ++ D V Sbjct: 211 WLPIVTMVVSASYTSAEPMFEKAFLNSAITVTLCSLWTTLINTAIGVASIDKDLMNVGRV 270 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 ++ R +++P P+ TG + G W I +E+ + + GLG ++ + Sbjct: 271 LNLPMRTTIRKLVMPSSLPFIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWD 324 Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 + G S ++++ VL + L+R + L+ + Sbjct: 325 EFQNGSSQSLAKIMVAVLTIGLIGFLLDRVMLACQALFSHSATR 368 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + V++ + + S+ + L P++ I + + L +L + Y Sbjct: 164 SLKTVFMGFVLATIVAVPLGVMCGLSKTINAALNPLIQIFKPVSPLAWLPIVTMVVSASY 223 Query: 128 PGKVIGAELA---AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E A + + +W + + +I +DL V R L L Sbjct: 224 TSAEPMFEKAFLNSAITVTLCSLWTTLINTAIGVASIDKDLMNVGRVLNLPMRTTIRKLV 283 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAI 241 +P S+P + M +S+ GW ++A+EM+ PG+G ++ + Q L I Sbjct: 284 MPSSLPFIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLAKI 337 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A+LT+ + FL D+++ Sbjct: 338 MVAVLTIGLIGFLLDRVML 356 >gi|289549090|ref|YP_003474078.1| nitrate ABC transporter inner membrane protein [Thermocrinis albus DSM 14484] gi|289182707|gb|ADC89951.1| nitrate ABC transporter, inner membrane subunit [Thermocrinis albus DSM 14484] Length = 274 Score = 158 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +I S + +P+G+++G + + P Q L +FP+ + Sbjct: 81 IGWQLLYSLKRVFLGFLIGSSVAVPLGLFLGMWNKLQTMFNPIIQTLRPVSPLAWFPIGL 140 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + H + + W L N GAS+ P D++ VA F + W + RY++ Sbjct: 141 AIFQASH----QAAVFTIAITSLWPTLINTAYGASSVPEDYRNVAKVFGFSRWTYLRYVV 196 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P+ +TG + G AW + +E+ + G TG+G YI +S +V+ Sbjct: 197 LPYTLPFILTGLKISMGIAWMVIVAAEMLAGG------TGIGFYIWDSWNALDLRKVISA 250 Query: 559 VLIMCCFVLALN 570 +LI+ L L+ Sbjct: 251 LLIIGIVGLVLD 262 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R+ +I +L + PI+ ++ + L + Sbjct: 77 NDKGIGWQLLYSLKRVFLGFLIGSSVAVPLGLFLGMWNKLQTMFNPIIQTLRPVSPLAWF 136 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + F + AA+F I + +W + ++P D V++ F S Sbjct: 137 PIGLAIFQA--------SHQAAVFTIAITSLWPTLINTAYGASSVPEDYRNVAKVFGFSR 188 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W Y+ +P+++P ++ + +SM W +VA+EM+ G GIG YI + Sbjct: 189 WTYLRYVVLPYTLPFILTGLKISMGIAWMVIVAAEMLAGGT------GIGFYIWDSWNAL 242 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 DL ++ A+L + V + D + + Sbjct: 243 DLRKVISALLIIGIVGLVLDSVFGK 267 >gi|254441535|ref|ZP_05055028.1| nitrate ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198251613|gb|EDY75928.1| nitrate ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 276 Score = 158 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 11/215 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + AW+ + D I +G +++RV+ +A++I IP+G IG Sbjct: 59 VLVKAWEELSNPFYDAGPNDKGIGIQIGY-SIYRVLTGYFMAALIAIPLGFLIGMSTVAY 117 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + ++ + W +L N G + Sbjct: 118 KALNPFIQVLRPISPLAWMPLALFVIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 173 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 D+ VA + ++ ++ +ILP P VTG + G AW + +E+ G Sbjct: 174 REDWVNVARTHELSAFKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 228 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 TG+G Y+ V+ +L++ + L+ Sbjct: 229 -TGIGYYVWNEWNNLDLTSVIFSILMIGVVGMLLD 262 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 14/194 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+L+ ++ L L S L P + +++ I L ++ + + Sbjct: 86 GYSIYRVLTGYFMAALIAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFVIQD 145 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +E +AIF IF +W M + + + D V+R+ LS ++ + + + Sbjct: 146 --------SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELSAFKTAFTVIL 197 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P +V M +S+ W +VA+EM+V G GIG Y+ DL ++++++ Sbjct: 198 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 251 Query: 246 LTMLGVIFLYDQLL 259 L + V L D L Sbjct: 252 LMIGVVGMLLDSAL 265 >gi|39935182|ref|NP_947458.1| nitrate transport system permease [Rhodopseudomonas palustris CGA009] gi|39649033|emb|CAE27554.1| possible nitrate transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 279 Score = 158 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ I D I LG ++ RV+ ++A ++ IP+G IG P ++ Sbjct: 62 VGAKLWEHIKRPFYDNGPNDKGLGIQLGY-SIARVMTGYLLAVLVAIPLGFLIGMSPLMN 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + +L ++ + W +L N G ++ Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLLNTAFGVASV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWINVARTLEVGTVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSIVNVIIAILMIGLVGMLLDQVLAR 270 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 93/205 (45%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + L + R+++ ++++L L S + L P + +++ I L ++ Sbjct: 80 NDKGLGIQLGYSIARVMTGYLLAVLVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWM 139 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + + L+AIF IF VW M + + ++ ++ V+R+ + Sbjct: 140 PLALY--------TIKDSSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGT 191 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++ + + +P + P ++ M +S+ W +VA+EM+V G GIG ++ Sbjct: 192 VRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 ++ ++ A+L + V L DQ+L R Sbjct: 246 SIVNVIIAILMIGLVGMLLDQVLAR 270 >gi|325122247|gb|ADY81770.1| sulfate ester permease protein (ABC superfamily, membrane) [Acinetobacter calcoaceticus PHEA-2] Length = 481 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 86/516 (16%), Positives = 179/516 (34%), Gaps = 68/516 (13%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + + L + + R ++ +L L SR L + IP L Sbjct: 17 VEIASQDLWSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTL 76 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L +++ K IF IF + + + + +I L+E++ + Sbjct: 77 AWLPLLMIWLGIENSLK--------IFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQ 128 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 + L +P ++P + ++++ GW ++A E++ + GIG + Sbjct: 129 FNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASSE------GIGYLMVTGR 182 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 + L + + + V ++D +L R +ER +P + + F K N Sbjct: 183 QLFQLDIVFVTIFVIASVGIIFDFILHR----------IERKFVFWPHAALSAHTFHKKN 232 Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 ++ PLS V + WF ++ Sbjct: 233 RSDVFK----SWVLPLSLVVLWAVSS----------------------------WFNLIS 260 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 + W+ + + + + +++R ++ +II +I VGI +G Sbjct: 261 SQILPAPWKVLEALWSGI---QDFSLTTAMYYSLYRAILGLIIGGLIGASVGIVVGLFKP 317 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 I + + P L + PL+ + L+ + + T + + G S Sbjct: 318 IENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSK----IVFISIATFFPMFIATWKGMS 373 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 + P EV+S+ +T + +ILP I P G A +W AS +E I Sbjct: 374 SIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMGSGI- 432 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 G+G+Y+ + + V+ +++ L Sbjct: 433 ----GIGSYMMAAQQNFEMERVIAATVLVAGLGAIL 464 Score = 95.8 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 10/192 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ R + ++ + + +G+ +G+ + L P + PL++ + Sbjct: 29 AISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGI 88 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 N ++ T I + AG KE+A+ ++LP Sbjct: 89 E----NSLKIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATL 144 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 PY+ TG A W + I E+ + + G+G + + V + + ++ Sbjct: 145 PYFFTGLRLAVAAGWTSLIAVELLA------SSEGIGYLMVTGRQLFQLDIVFVTIFVIA 198 Query: 564 CFVLALNRFLWH 575 + + L Sbjct: 199 SVGIIFDFILHR 210 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 96/237 (40%), Gaps = 14/237 (5%) Query: 23 LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L+ V++ + + + P +++ + + SL + R + ++I L Sbjct: 244 LSLVVLWAVSSWFNLISSQILPAPWKVLEALWSGIQDFSLTTAMYYSLYRAILGLIIGGL 303 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + + + +L P L+ ++ I I ++ +F +L+ I Sbjct: 304 IGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLE--------DLSKIVF 355 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + M + ++ + +IP L EVS + R++ Q+ L +P P + +++ Sbjct: 356 ISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALL 415 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 W +E ++ GIGSY+ A + ++ ++ A + + G+ + L Sbjct: 416 YSWMASFGAEYLMGSGI-----GIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWL 467 >gi|16332005|ref|NP_442733.1| hypothetical protein slr0041 [Synechocystis sp. PCC 6803] gi|81672180|sp|Q55461|CMPB_SYNY3 RecName: Full=Bicarbonate transport system permease protein CmpB gi|1001317|dbj|BAA10804.1| unknown protein [Synechocystis sp. PCC 6803] Length = 280 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 9/193 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A+I+ I GI +G +P + + P Q L + P+ + Sbjct: 84 LFWQTLASLGRVAQGYSLAAIVGISTGILVGTQPLLDKALDPIFQFLRMVAPLAWVPIAL 143 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ + W IL N G P D+ V ++ +++ I+ Sbjct: 144 VALQ----QNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVRKVLRLSPQKFFFKIL 199 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG A G AW A I +E+ G + G+G +I ++ ++ E++L Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYISEIILA 254 Query: 559 VLIMCCFVLALNR 571 V + L L+R Sbjct: 255 VFYIGAVGLLLDR 267 Score = 155 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 106/253 (41%), Gaps = 22/253 (8%) Query: 14 RIFPNIFDLLAFVLVIGIIN-----ILLHGIQETTVPRDIVDIVPITLDVHSLP----QY 64 I P IF +L F+L+ +I+ L T PR ++ D L Sbjct: 28 DILPPIFGILGFLLLWQLISSAGLIKLPPPSSLWTDPRTRTLLMYPFYDQGGLDKGLFWQ 87 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ ++ + L L L PI ++ + L ++ +V Sbjct: 88 TLASLGRVAQGYSLAAIVGISTGILVGTQPLLDKALDPIFQFLRMVAPLAWVPIALVALQ 147 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 P AAIF IF + VW + + + + IP+D V + RLS + F+ + Sbjct: 148 QNQP--------AAIFVIFITSVWPILINTTEGVKQIPQDYINVRKVLRLSPQKFFFKIL 199 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + + +++ W ++A+E+++ G + GIG +I A ++ + I+ A Sbjct: 200 IPSALPYIFTGLRIAIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYISEIILA 254 Query: 245 MLTMLGVIFLYDQ 257 + + V L D+ Sbjct: 255 VFYIGAVGLLLDR 267 >gi|50120492|ref|YP_049659.1| putative sulfate ester transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49611018|emb|CAG74463.1| putative sulfate ester transporter, permease component [Pectobacterium atrosepticum SCRI1043] Length = 529 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 89/552 (16%), Positives = 181/552 (32%), Gaps = 77/552 (13%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 LA + + + +IV + L + L + R++ ++ LL Sbjct: 33 LALLALWYTSTHYGWMPAQILPAPNIVANTAVELWHNDLLPQLFISLQRLVGGLLAGLLA 92 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + L SRR +L P + + IP LG++ +V F K+ I Sbjct: 93 GTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFMVLFGIDDGLKLA--------VI 144 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +T + N+P L+EV+R+ RL Q+ L +P + P + + +++S Sbjct: 145 IKAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLVKLTLPAAFPTWLTGLRLALSQ 204 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259 W ++ E++ GIG + + L + + + + L L Sbjct: 205 AWVSLIVVELLASSQ------GIGYLLVWGRQLFQLDIVFVCIAVIGLAGLTMEWLINQL 258 Query: 260 FRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRT 319 R ++ W + PLS R Sbjct: 259 ERRLVFWPH--------------------------------------PPLSQLTTTPSRK 280 Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 L + F L +++ W + W + ++ + + + Sbjct: 281 LSALVLPFLLLLLWQQASRFG-------WIDPLLLPPPADVWHMLLQGIHDGSLPEAMQ- 332 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 ++ R + + + + G+ +G + P L + PL+ + Sbjct: 333 -----ASLTRALAGAVCGIVAGLVGGVLLGLNATSDALFTPTVATLRQIALFAWLPLLTA 387 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 V N + + + +L G +EVA + R +IL Sbjct: 388 WVG----NDEAGKITFVALASFFPMLVASHRGIRQRSQALQEVALVLQLRLSTRLRVLIL 443 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 PG P G + AW +I +E TG+G+ + + + P ++ G+ Sbjct: 444 PGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSG-----TGIGSLMINAQQLLDMPLIISGM 498 Query: 560 LIMCCFVLALNR 571 L++ L+R Sbjct: 499 LLIGLMGAVLDR 510 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 94/235 (40%), Gaps = 16/235 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P D+ ++ + SLP+ + R L+ V ++ V L + + Sbjct: 308 LPPPADVWHMLLQGIHDGSLPEAMQASLTRALAGAVCGIVAGLVGGVLLGLNATSDALFT 367 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + ++ I + +L + N GK+ LA+ F M + ++ + Sbjct: 368 PTVATLRQIALFAWLPLLTAWVGNDEAGKITFVALASFF--------PMLVASHRGIRQR 419 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L+EV+ +L + L +P + P + + +S+ W + +E + T Sbjct: 420 SQALQEVALVLQLRLSTRLRVLILPGAAPAIFAGLRLSLIYAWLGTIGAEYFMSSGT--- 476 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLE 273 GIGS + A + D+ I+ ML + + + D++ L + M W + +E Sbjct: 477 --GIGSLMINAQQLLDMPLIISGMLLIGLMGAVLDRVGLGLEQRMTRWRSAGEIE 529 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ I++ R+V ++ + +G +G + P LA P + PL + Sbjct: 71 LLPQLFISLQRLVGGLLAGLLAGTLLGALMGASRRAEHLLHPTVYALAQIPTLGWIPLFM 130 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++I + + G P+ +EVA + + + + Sbjct: 131 VLFGI----DDGLKLAVIIKAVIIPVTLHTQTGVRNVPHALQEVARTLRLPWHQRLVKLT 186 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP FP ++TG A AW + IV E+ + + G+G + + V + Sbjct: 187 LPAAFPTWLTGLRLALSQAWVSLIVVELLA------SSQGIGYLLVWGRQLFQLDIVFVC 240 Query: 559 VLIMCCFVLALNRFL 573 + ++ L + + Sbjct: 241 IAVIGLAGLTMEWLI 255 >gi|90415462|ref|ZP_01223396.1| putative nitrate transporter [marine gamma proteobacterium HTCC2207] gi|90332785|gb|EAS47955.1| putative nitrate transporter [marine gamma proteobacterium HTCC2207] Length = 333 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y +++ V+ ++A+ I IP+GI G + I P Q Sbjct: 108 VKVRPYTGKATYFDQIFTSLYTVMFGFLVATFIAIPLGILCGLSENAYRAINPIIQTFKP 167 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS +++ + L + W + N I G ++ D Sbjct: 168 VSPLAWLPLVTMVVSALYVSDDPMFEKAFLTSGFTVALCCLWPTVVNTIVGVASINRDLI 227 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +V+ ++ + + I++P P TG + W I +E+ + + GLG Sbjct: 228 DVSRVLRLSSPVYIKTIVIPSATPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLG 281 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 +I + + G S +++ V+ + L++ + Sbjct: 282 KFIWDEFQNGSSSSLGRIMVAVITIGIIGFILDQLM 317 Score = 136 bits (343), Expect = 9e-30, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 12/199 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + ++ +++ L S + PI+ + + L +L + LY Sbjct: 126 SLYTVMFGFLVATFIAIPLGILCGLSENAYRAINPIIQTFKPVSPLAWLPLVTMVVSALY 185 Query: 128 ---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 A L + F + +W + + +I RDL +VSR RLS + Sbjct: 186 VSDDPMFEKAFLTSGFTVALCCLWPTVVNTIVGVASINRDLIDVSRVLRLSSPVYIKTIV 245 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P + P + + +S++ GW ++A+EM+ PG+G +I + L I Sbjct: 246 IPSATPLIFTGLRLSLATGWMVLIAAEMLA------QNPGLGKFIWDEFQNGSSSSLGRI 299 Query: 242 LYAMLTMLGVIFLYDQLLF 260 + A++T+ + F+ DQL+ Sbjct: 300 MVAVITIGIIGFILDQLML 318 >gi|121610891|ref|YP_998698.1| nitrate ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121555531|gb|ABM59680.1| nitrate ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 295 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 85/202 (42%), Gaps = 11/202 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + ++ RV + IA+++ IP+G +G P + + PF Q+L + PL + Sbjct: 100 IGIQLGYSLARVGLGFAIAAVVAIPLGFLLGMSPLMQRALNPFIQILKPISPLAWMPLAL 159 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ ++ + W +L N G ++ D+ A + + R +I Sbjct: 160 YTIK----DSSISGIFVIFICSVWPMLMNTAFGVASVRRDWLNAAKTLEVKPLRKAFLVI 215 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG + G AW + +E+ G TG+G Y+ S V+ Sbjct: 216 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLSLTSVIFA 269 Query: 559 VLIMCCFVLALNRFLWHPLYLY 580 +L++ + L+ ++ L Sbjct: 270 ILLIGVTGMLLD-LVFARLQKL 290 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ I+ + L S + L P + I++ I L ++ + Sbjct: 104 LGYSLARVGLGFAIAAVVAIPLGFLLGMSPLMQRALNPFIQILKPISPLAWMPLALY--- 160 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++ IF IF VW M + + ++ RD +++ + +K + + Sbjct: 161 -----TIKDSSISGIFVIFICSVWPMLMNTAFGVASVRRDWLNAAKTLEVKPLRKAFLVI 215 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA+EM+V G GIG Y+ L ++++A Sbjct: 216 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLSLTSVIFA 269 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + L D + R Sbjct: 270 ILLIGVTGMLLDLVFAR 286 >gi|115526626|ref|YP_783537.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] gi|115520573|gb|ABJ08557.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] Length = 279 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ I D I LG ++ RV++ +IA + IP+G IG P ++ Sbjct: 62 VGAKLWEHIQRPFYDNGPNDKGLGIQLGY-SIARVMIGYLIAVAVAIPLGFLIGMSPLMN 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + L+ ++ + W +L N G ++ Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIKDSGLS----AIFVIFICSVWPMLLNTAFGVASV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSITNVIIAILMIGVVGMLLDQILAR 270 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 97/238 (40%), Gaps = 23/238 (9%) Query: 33 NILLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRMLSAMVISLLFT 83 HG P D+ + + + L + R++ +I++ Sbjct: 47 ATATHGKSAMPGPLDVGAKLWEHIQRPFYDNGPNDKGLGIQLGYSIARVMIGYLIAVAVA 106 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L S + L P + +++ I L ++ + + + L+AIF IF Sbjct: 107 IPLGFLIGMSPLMNKALDPFIQVLKPISPLAWMPLALY--------TIKDSGLSAIFVIF 158 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 VW M + + ++ ++ V+R+ + ++ + + +P + P ++ M +S+ Sbjct: 159 ICSVWPMLLNTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIA 218 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 W +VA+EM+V G GIG ++ + ++ A+L + V L DQ+L R Sbjct: 219 WLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILMIGVVGMLLDQILAR 270 >gi|154246444|ref|YP_001417402.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160529|gb|ABS67745.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 298 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + W +++ RV V +A+++ I VG IG + P Q+L P + Sbjct: 95 PQDIGLGWRVLVSLQRVAVGFGLAAVVGILVGAVIGQSVWAMRGLDPIFQVLRTVPPLAW 154 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ ++ + N ++ W ++ N G P D++ VA + + Sbjct: 155 LPIALAAFR----DSNPSAIFVIFITAIWPVIINTAVGIRNIPQDYRNVALVLRLNPVEF 210 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I+LP PY TG G +W A + +E+ + G G+G +I ++ P Sbjct: 211 FWKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLP 264 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++++ ++ + L+R + Sbjct: 265 DIIVALVYIGVVGFVLDRLV 284 Score = 155 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + + + +S L PI +++++P L +L Sbjct: 99 GLGWRVLVSLQRVAVGFGLAAVVGILVGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPIA 158 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V+ RL+ + Sbjct: 159 LAAFRDSNP--------SAIFVIFITAIWPVIINTAVGIRNIPQDYRNVALVLRLNPVEF 210 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 211 FWKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 264 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V F+ D+L+ Sbjct: 265 DIIVALVYIGVVGFVLDRLV 284 >gi|294053878|ref|YP_003547536.1| binding-protein-dependent transport systems inner membrane component [Coraliomargarita akajimensis DSM 45221] gi|293613211|gb|ADE53366.1| binding-protein-dependent transport systems inner membrane component [Coraliomargarita akajimensis DSM 45221] Length = 542 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 76/236 (32%), Gaps = 34/236 (14%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Y + V ++F V + I A+II IPVGI G + + P + V Sbjct: 306 YAKAMTVYLQIKRSLFTVFIGFITAAIIAIPVGILCGLSRIAMACLTPIISIFKPVSPVV 365 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMI-----------------------FGTQWYILFNVI 469 + + V + +P L W L N Sbjct: 366 WLLIFQIVVGAFFPDPESHPFFLFFNSLPIIGGLGINPALIFSACTVAMCAVWPALVNTA 425 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G ++ D VA + W II+P P G + G W I +E S Sbjct: 426 LGVASIDKDHINVARVLRLNFWERLTKIIIPSAMPLVFAGLRISLGVGWMVLIAAEALS- 484 Query: 530 GHIHLRTTGLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNR--FLWHPLYLY 580 + GLG ++ + + G SF ++ ++ L+R + L + Sbjct: 485 -----SSDGLGKFVWDEYQNGSSFSFANILYACFVVGAIGFMLDRMMIILQRLVSF 535 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 87/224 (38%), Gaps = 30/224 (13%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 R+ + + + + L SR L PI+ I + + + +L + Sbjct: 318 RSLFTVFIGFITAAIIAIPVGILCGLSRIAMACLTPIISIFKPVSPVVWLLIFQIVVGAF 377 Query: 127 YPGKV----------------IGAELAAIF---AIFTSQVWNMTFSMYQSLCNIPRDLEE 167 +P +G A IF + VW + + +I +D Sbjct: 378 FPDPESHPFFLFFNSLPIIGGLGINPALIFSACTVAMCAVWPALVNTALGVASIDKDHIN 437 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 V+R RL+ W++ + +P +MP + + +S+ GW ++A+E + D G+G Sbjct: 438 VARVLRLNFWERLTKIIIPSAMPLVFAGLRISLGVGWMVLIAAEALSSSD------GLGK 491 Query: 228 YIALAIKEQ---DLLAILYAMLTMLGVIFLYDQ--LLFRPMIVW 266 ++ + ILYA + + F+ D+ ++ + ++ + Sbjct: 492 FVWDEYQNGSSFSFANILYACFVVGAIGFMLDRMMIILQRLVSF 535 >gi|192289974|ref|YP_001990579.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris TIE-1] gi|192283723|gb|ACF00104.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 538 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 70/563 (12%), Positives = 171/563 (30%), Gaps = 70/563 (12%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P ++ + +A + + + + +V L +L + Sbjct: 30 PAWLRSSALLGLVVPVALLALWSVAAERHWMSSQVLPTPALVWQTAGELLADNLLSNLAI 89 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+L ++ L SRR+ + P + +P L ++ F ++ Sbjct: 90 SLQRLLFGFTLAALAGGFLGGAMGLSRRVEAAIYPTFIALVQVPTLAWIPFLMMVLGLG- 148 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E + I + V + + + ++ L E +R RL +++ + +P Sbjct: 149 -------EALKVVVIIKAVVTPVVIYTHVGVRDVDPKLLEATRILRLGFFRRLGSVILPA 201 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + + + ++ GW +VA E++ + GIG + + L + +L Sbjct: 202 ALPAFLTGLRLGLAQGWTSLVAVELLASSE------GIGFLMVWGRQLFQLDVVFVCILV 255 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 + V + D L + ++ + Sbjct: 256 IGIVGLVMD------------------------------------RGLNVVDRAAVRWPR 279 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 P + ++ + FP L + S + V + Sbjct: 280 PALAEHRTARGGYRLLSWLFPAGLLAAWAAASASGAISPTMLPSPAAVLSVLGHGLADGS 339 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +++ R + + + + VG+ +G + L Sbjct: 340 FET-----------AMGLSLQRAFIGLALGAGSGFAVGLAMGLNRPLDRLFNGTLAALRL 388 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 + PL+ + V + + + + + G + E + + Sbjct: 389 VAIFAWIPLLTAWVGLGEASK----ITFVAIASFFPMQLAAYRGVATLSPHLIEASWTLR 444 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + G R ++LPGI P G A W ++ +E G+G+ + + Sbjct: 445 LGGSDRLRCLVLPGIAPSVFAGLRLALLQCWIGTMGAEYFM-----PSGGGIGSLMIGAQ 499 Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570 + V+ ++++ LN Sbjct: 500 QMFRTDVVLAAMVMIGVVAALLN 522 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 84/268 (31%), Gaps = 18/268 (6%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI--------AWQSIG 365 R V F F + + + + ++ ++ + Sbjct: 10 DYPPRGAAVAGFRTLPRFGVPAWLRSSALLGLVVPVALLALWSVAAERHWMSSQVLPTPA 69 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + ++ I++ R++ +A++ +G +G + + I P L Sbjct: 70 LVWQTAGELLADNLLSNLAISLQRLLFGFTLAALAGGFLGGAMGLSRRVEAAIYPTFIAL 129 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + P ++ + + + ++ ++ G E Sbjct: 130 VQVPTLAWIPFLMMVLGLGEALKVVVIIKAVVT----PVVIYTHVGVRDVDPKLLEATRI 185 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + +R +ILP P ++TG W + + E+ + + G+G + Sbjct: 186 LRLGFFRRLGSVILPAALPAFLTGLRLGLAQGWTSLVAVELLA------SSEGIGFLMVW 239 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + V + +L++ L ++R L Sbjct: 240 GRQLFQLDVVFVCILVIGIVGLVMDRGL 267 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 80/230 (34%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ ++ L S + R + + F +R L + Sbjct: 321 LPSPAAVLSVLGHGLADGSFETAMGLSLQRAFIGLALGAGSGFAVGLAMGLNRPLDRLFN 380 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 L ++ + I ++ + K+ +A+ F M + Y+ + + Sbjct: 381 GTLAALRLVAIFAWIPLLTAWVGLGEASKITFVAIASFF--------PMQLAAYRGVATL 432 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E S + RL G + L +P P + + +++ W + +E + Sbjct: 433 SPHLIEASWTLRLGGSDRLRCLVLPGIAPSVFAGLRLALLQCWIGTMGAEYFMPSG---- 488 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + ++ A + M+GV+ + + + ++R Sbjct: 489 -GGIGSLMIGAQQMFR-TDVVLAAMVMIGVVAALLNAIGSRIEARATRWR 536 >gi|84684440|ref|ZP_01012341.1| putative nitrate transporter [Maritimibacter alkaliphilus HTCC2654] gi|84667419|gb|EAQ13888.1| putative nitrate transporter [Rhodobacterales bacterium HTCC2654] Length = 361 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 79/218 (36%), Gaps = 17/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V + ++ V +I S I IP+GI G P ++ I P Q+ Sbjct: 138 VKDIPFTGAPSYYDQIWTSIKTVFFGFLIGSAIAIPLGIVAGLSPIANAAINPIVQIFKP 197 Query: 428 FPANVFFPLVVSCVSYYHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 + P+V VS + ++ + + W L N G S+ D Sbjct: 198 VSPLAWLPIVTMIVSALAAEGTDGLLPKSFIISAITVTLCSLWPTLINTSLGVSSIDKDL 257 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 V+ + W ++LP P TG + G W I +E+ + + GL Sbjct: 258 VSVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGL 311 Query: 540 GAYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW 574 G ++ + + G S +++ V + L+R ++ Sbjct: 312 GKFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMF 349 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 13/196 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128 + +I +A S + PI+ I + + L +L + L Sbjct: 160 VFFGFLIGSAIAIPLGIVAGLSPIANAAINPIVQIFKPVSPLAWLPIVTMIVSALAAEGT 219 Query: 129 -GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G + + + + + +W + + +I +DL VS+ +++ W K L +P Sbjct: 220 DGLLPKSFIISAITVTLCSLWPTLINTSLGVSSIDKDLVSVSKVLKMNTWTKITKLVLPS 279 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYA 244 ++P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ A Sbjct: 280 ALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVA 333 Query: 245 MLTMLGVIFLYDQLLF 260 + T+ + FL D+++F Sbjct: 334 VFTIGIIGFLLDRVMF 349 >gi|170741903|ref|YP_001770558.1| nitrate ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196177|gb|ACA18124.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 288 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 94/201 (46%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ ++ + + TL +S L PI ++++IP L +L Sbjct: 88 KGLFWHIVASLQRVALGFALASVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F + P +AIF IF + +W + + + NIP+D V+ RL+ ++ Sbjct: 148 SLAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVASVLRLNAFE 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P + + + + W +VA+EM++ G GIG +I A + Sbjct: 200 FFGKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHI 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + + F+ D+++ Sbjct: 254 SEIIVALVYVGVIGFVLDRVV 274 Score = 157 bits (396), Expect = 7e-36, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +AS+ + +G +G + P Q+L P + PL + Sbjct: 90 LFWHIVASLQRVALGFALASVAGVLLGTLVGQSEWAMRGLDPIFQVLRTIPPLAWLPLSL 149 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VAS + + ++ I+ Sbjct: 150 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVASVLRLNAFEFFGKIM 205 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ E+++ Sbjct: 206 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 259 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 260 LVYVGVIGFVLDRVV 274 >gi|316934735|ref|YP_004109717.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas palustris DX-1] gi|315602449|gb|ADU44984.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris DX-1] Length = 279 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ I + D I LG ++ RV++ ++A + IP+G IG P ++ Sbjct: 62 VGAKLWEHIKHPFYDNGPNDKGLGIQLGY-SIARVMIGYLLAVAVAIPLGFLIGMSPLMN 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + +L ++ + W +L N G ++ Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIK----DSSLSAVFVIFICSVWPMLLNTAFGVASV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWINVARTLEVGTVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSIVNVIIAILMIGLVGMLLDQVLAR 270 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 91/205 (44%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + L + R++ ++++ L S + L P + +++ I L ++ Sbjct: 80 NDKGLGIQLGYSIARVMIGYLLAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWM 139 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + + L+A+F IF VW M + + ++ ++ V+R+ + Sbjct: 140 PLALY--------TIKDSSLSAVFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGT 191 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++ + + +P + P ++ M +S+ W +VA+EM+V G GIG ++ Sbjct: 192 VRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 ++ ++ A+L + V L DQ+L R Sbjct: 246 SIVNVIIAILMIGLVGMLLDQVLAR 270 >gi|319782349|ref|YP_004141825.1| nitrate ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168237|gb|ADV11775.1| nitrate ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 296 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 107/277 (38%), Gaps = 23/277 (8%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI---------- 359 + + + T R P ++ V ++ I VV +A Sbjct: 16 AKPAEVIAFTAKARRRFEPLAIAGKLASALVPPIIVIALMLVVWQIACSSPTSSLPPPTQ 75 Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 W ++ H + + + W I++ RV V +A+++ + +G +G Sbjct: 76 VWNEAYDLIAHPFFDNGPQDIGLAWRVLISLQRVAVGFGLAAVVGVALGALVGQSIWAMR 135 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + P Q+L P + PL ++ + + ++ + W I+ N G P Sbjct: 136 GLDPVFQILRTVPPLAWLPLSLAAFR----DSSPSAIFVIFITSIWPIIINTAVGVRNIP 191 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D++ V+ + + ++ I++P PY TG G +W A + +E+ + G Sbjct: 192 EDYRNVSRILRLNQFEFFVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------ 245 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ P++++ + + L+R + Sbjct: 246 VGIGFFIWDAWNSSRLPDIIVALAYIGVTGFCLDRLV 282 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + L +S L P+ I++++P L +L + Sbjct: 97 GLAWRVLISLQRVAVGFGLAAVVGVALGALVGQSIWAMRGLDPVFQILRTVPPLAWLPLS 156 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP D VSR RL+ ++ Sbjct: 157 LAAFRDSSP--------SAIFVIFITSIWPIIINTAVGVRNIPEDYRNVSRILRLNQFEF 208 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + VP + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 209 FVKIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 262 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + F D+L+ Sbjct: 263 DIIVALAYIGVTGFCLDRLV 282 >gi|254454126|ref|ZP_05067563.1| nitrate ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198268532|gb|EDY92802.1| nitrate ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 259 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 11/215 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + AWQ + D I +G +++RV+ +A+ I IP+G IG Sbjct: 42 VLVKAWQELSNPFYDAGPNDKGIGIQIGY-SIYRVLTGYFLAAFIAIPLGFLIGMSSVAH 100 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + ++ + W +L N G + Sbjct: 101 KALNPFIQVLRPISPLAWMPLALFIIQDSEAS----AIFVIFICSIWPMLINTAFGVAGV 156 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 D+ VA + + + +ILP P VTG + G AW + +E+ G Sbjct: 157 REDWVNVARTHELGALKTAFTVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG----- 211 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 TG+G Y+ V+ +L++ + L+ Sbjct: 212 -TGIGYYVWNEWNNLDLTSVIFSILMIGVVGMLLD 245 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 14/191 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+L+ ++ L S L P + +++ I L ++ + + Sbjct: 69 GYSIYRVLTGYFLAAFIAIPLGFLIGMSSVAHKALNPFIQVLRPISPLAWMPLALFIIQD 128 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +E +AIF IF +W M + + + D V+R+ L + + + + Sbjct: 129 --------SEASAIFVIFICSIWPMLINTAFGVAGVREDWVNVARTHELGALKTAFTVIL 180 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P +V M +S+ W +VA+EM+V G GIG Y+ DL ++++++ Sbjct: 181 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 234 Query: 246 LTMLGVIFLYD 256 L + V L D Sbjct: 235 LMIGVVGMLLD 245 >gi|86608094|ref|YP_476856.1| nitrate ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556636|gb|ABD01593.1| nitrate ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 275 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ ++ RV + A+++ I +GI +G I+ + P Q L + P+ + Sbjct: 80 LLRQTLASLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFLRMVAPLAWVPISL 139 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W IL N G P D+ V+ ++ ++ ++ Sbjct: 140 AALQR----NEPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVL 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A I +E+ G G+G +I ++ ++ E+++ Sbjct: 196 LPSALPYMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVA 250 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L+R + Sbjct: 251 VIYIGAVGLLLDRLM 265 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 106/255 (41%), Gaps = 22/255 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILL---------HGIQETTVPRDIVDIVPITLDVHSLPQY 64 +I P + ++ F+L+ I+ + E + + + + L + Sbjct: 24 QILPPVVGIVGFLLIWQILASANLIRLPGPWDVWMDERSRYLILHPLYRNSDLDQGLLRQ 83 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ + L L S + L PI ++ + L ++ ++ Sbjct: 84 TLASLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFLRMVAPLAWVPISLAALQ 143 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 P AA+F IF + +W + + + IP D VS+ +LS F+ + Sbjct: 144 RNEP--------AALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVL 195 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + + + + W ++A+E+++ G +PGIG +I A ++ + I+ A Sbjct: 196 LPSALPYMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVA 250 Query: 245 MLTMLGVIFLYDQLL 259 ++ + V L D+L+ Sbjct: 251 VIYIGAVGLLLDRLM 265 >gi|229587775|ref|YP_002869894.1| putative ABC sulfur transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359641|emb|CAY46484.1| putative ABC sulfur transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 530 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 76/562 (13%), Positives = 176/562 (31%), Gaps = 68/562 (12%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P R+ P + + F L + + ++ P +V + L L + + + Sbjct: 21 PLRCERLLPWLLPVTLFAL-WWLASRNHWMSEQILPPPSLVWSSAVELAGGELWSHLAIS 79 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ ++ + + + S R ++ P + +P L ++ +V+F Sbjct: 80 LQRLSWGLLAGIGAGALLGAVLGFSARAERLVFPTFSALSQVPTLAWIPLFMVFFGIG-- 137 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E + + + V +T + + L E +R RL L +P + Sbjct: 138 ------ETLKLVVLVKAIVVPVTLHTLVGVRDAQPQLREAARVLRLPTHLLIRRLILPAA 191 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + ++++ GW ++A E++ + GIG + A + L + ++ + Sbjct: 192 LPAFMAGVRLALAAGWTSLLAVELLASSE------GIGYLMVWARQLFMLDIVFVCIVVI 245 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSP 308 + D + ++ ++ P Sbjct: 246 GVFGVVMD------------------------------------RGIGWLDRKWVHWPHP 269 Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 + +++ R G R L L + +V+ W V+ + + V Sbjct: 270 ATAQIRRGPRYQGWQRLQPWVLPLLLLALWQVATQQG--WVDPNILVSPWVVLHTTVAGV 327 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 L + + + A G+W+G + P L Sbjct: 328 VDGNLSGALGTSLGRSLGGLLLGGGVGFAM------GLWLGLSRRSERVLGPTLSALRQI 381 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 + PL+ + L + + + + E A + Sbjct: 382 AIFAWVPLLTAWFGLGELAKWV----FIALAAFFPLFIATQRSVLNLSPQLNEAAQVLRL 437 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 ++ R ++LPG G + AW +I +E G+G+ + + + Sbjct: 438 NLFQRLRRLVLPGAAAGIFAGLRLSLIYAWLGTIGAEYFM-----PSNGGIGSLMIGAQQ 492 Query: 549 KGSFPEVVLGVLIMCCFVLALN 570 ++ G+L++ ALN Sbjct: 493 LLRMDLIMSGMLLVGLTGAALN 514 Score = 95.0 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ + +L + R L +++ F SRR VL Sbjct: 313 LVSPWVVLHTTVAGVVDGNLSGALGTSLGRSLGGLLLGGGVGFAMGLWLGLSRRSERVLG 372 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L ++ I I ++ +F K + LAA F +F + +S+ N+ Sbjct: 373 PTLSALRQIAIFAWVPLLTAWFGLGELAKWVFIALAAFFPLF--------IATQRSVLNL 424 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E ++ RL+ +Q+ L +P + G+ + +S+ W + +E + + Sbjct: 425 SPQLNEAAQVLRLNLFQRLRRLVLPGAAAGIFAGLRLSLIYAWLGTIGAEYFMPSN---- 480 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GIGS + A + + I+ ML + + L+ + + + ++R Sbjct: 481 -GGIGSLMIGAQQLLRMDLIMSGMLLVGLTGAALN-LIGQRIETRATRWR 528 >gi|87311267|ref|ZP_01093389.1| nitrate transport permease protein [Blastopirellula marina DSM 3645] gi|87286007|gb|EAQ77919.1| nitrate transport permease protein [Blastopirellula marina DSM 3645] Length = 519 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 70/189 (37%), Gaps = 14/189 (7%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Y ++ V V + A+ I IP+G+ G I + + P L V Sbjct: 298 YAKPPTFFDQVFTSIECVFVGFLFATAIAIPIGVLCGLNKVIMASLSPLISLFKPVSPIV 357 Query: 433 FFPLVVSCVSYYHLNPN--------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + P+V V + P+ L ++ + + W L N G ++ D VA Sbjct: 358 WLPIVFIVVGGFIERPDEAWVKPAFLSSAITVALCSLWPTLVNTALGVASIDKDHLNVAR 417 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 ++ W I++P P TG + G W I +E+ S + GLG ++ Sbjct: 418 VLRLSMWDRLTKIVIPSALPLIFTGLRISLGVGWMVLIAAELLS------SSPGLGKFVW 471 Query: 545 ESTEKGSFP 553 + GS Sbjct: 472 DMFNNGSSD 480 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 66/170 (38%), Gaps = 10/170 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK- 130 + + + L ++ + L P++ + + + + +L + Sbjct: 315 VFVGFLFATAIAIPIGVLCGLNKVIMASLSPLISLFKPVSPIVWLPIVFIVVGGFIERPD 374 Query: 131 ---VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 V A L++ + +W + + +I +D V+R RLS W + + +P Sbjct: 375 EAWVKPAFLSSAITVALCSLWPTLVNTALGVASIDKDHLNVARVLRLSMWDRLTKIVIPS 434 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 ++P + + +S+ GW ++A+E++ PG+G ++ Sbjct: 435 ALPLIFTGLRISLGVGWMVLIAAELLSSS------PGLGKFVWDMFNNGS 478 >gi|295689454|ref|YP_003593147.1| nitrate ABC transporter inner membrane subunit [Caulobacter segnis ATCC 21756] gi|295431357|gb|ADG10529.1| nitrate ABC transporter, inner membrane subunit [Caulobacter segnis ATCC 21756] Length = 292 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 79/195 (40%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + I+++ I +G+++G + P Q+L P + P+ + Sbjct: 94 LFWHVFTSLKRVGIGFSISAVCGILLGVFVGSNRWAHRGLDPIFQVLRTVPPLAWLPISL 153 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ W I+ N G P+D+ VA ++ ++ I+ Sbjct: 154 AAF----HQAQPSALFVIFITAIWPIIINTAVGVRNIPSDYVNVARVLRLSPVEYFFKIL 209 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + SE+ G G+G +I + ++++ Sbjct: 210 LPATTPYIFTGLRIGIGMSWLAIVASEMLLGG------VGIGFFIWDQYNASRIADIIVA 263 Query: 559 VLIMCCFVLALNRFL 573 + + L+R + Sbjct: 264 LAWVGMTGFFLDRLV 278 Score = 156 bits (395), Expect = 8e-36, Method: Composition-based stats. Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ IS + + +R L PI +++++P L +L Sbjct: 92 KGLFWHVFTSLKRVGIGFSISAVCGILLGVFVGSNRWAHRGLDPIFQVLRTVPPLAWLPI 151 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F P +A+F IF + +W + + + NIP D V+R RLS + Sbjct: 152 SLAAFHQAQP--------SALFVIFITAIWPIIINTAVGVRNIPSDYVNVARVLRLSPVE 203 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F+ + +P + P + + + + W +VASEM++ G GIG +I + Sbjct: 204 YFFKILLPATTPYIFTGLRIGIGMSWLAIVASEMLLGGV------GIGFFIWDQYNASRI 257 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A+ + F D+L+ Sbjct: 258 ADIIVALAWVGMTGFFLDRLV 278 >gi|222106861|ref|YP_002547652.1| nitrate ABC transporter permease protein [Agrobacterium vitis S4] gi|221738040|gb|ACM38936.1| nitrate ABC transporter permease protein [Agrobacterium vitis S4] Length = 297 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 91/217 (41%), Gaps = 13/217 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 W+ ++ + + I LG +++ RV + +A+I+ + +G +G Sbjct: 77 VWEEAHDLITAPFFNNGPQDIGLGLRVLVSLERVAIGFGLAAIVGVFLGAVVGQSIWAMR 136 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + P Q+L P + PL ++ N N ++ + W ++ N G P Sbjct: 137 GLDPIFQILRTVPPLAWLPLSLAAFQ----NSNPSAIFVIFITSIWPVIINTAVGVRNIP 192 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 +D++ VA + ++ I++P PY TG G +W A + +E+ + G Sbjct: 193 DDYRNVARVLRLNPLEFFIRIMVPAAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------ 246 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G +I ++ ++++ + + L++ + Sbjct: 247 VGIGFFIWDAWNSSRLSDIIVALAYIGVTGFVLDKLV 283 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 99/254 (38%), Gaps = 21/254 (8%) Query: 13 RRIFPNIFDLLAFVLVIGII-----NILLHGIQETTVPRDIVDIVPITLDVH--SLPQYA 65 R + P L + + I L Q D++ L Sbjct: 44 RNVVPPFVVLAILLGIWQIACSHAGATLPPPSQVWEEAHDLITAPFFNNGPQDIGLGLRV 103 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ ++ + + +S L PI I++++P L +L ++ F N Sbjct: 104 LVSLERVAIGFGLAAIVGVFLGAVVGQSIWAMRGLDPIFQILRTVPPLAWLPLSLAAFQN 163 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF IF + +W + + + NIP D V+R RL+ + F + V Sbjct: 164 SNP--------SAIFVIFITSIWPVIINTAVGVRNIPDDYRNVARVLRLNPLEFFIRIMV 215 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P + + + + W +VA+EM+ G GIG +I A L I+ A+ Sbjct: 216 PAAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLSDIIVAL 269 Query: 246 LTMLGVIFLYDQLL 259 + F+ D+L+ Sbjct: 270 AYIGVTGFVLDKLV 283 >gi|254422823|ref|ZP_05036541.1| nitrate ABC transporter, permease protein [Synechococcus sp. PCC 7335] gi|196190312|gb|EDX85276.1| nitrate ABC transporter, permease protein [Synechococcus sp. PCC 7335] Length = 279 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + L + W I++ RV + +AS+I +P+GI IG P P+ QLL + Sbjct: 78 PNDLGIGWNLLISLRRVAIGYTLASLIAVPLGILIGISPIAYKAFNPYVQLLKPVSPLAW 137 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + + + +++ + W L N G + ++ +V+ + + R Sbjct: 138 LPLGLYIFR----DSEITGIFIILISSIWPTLTNTAFGVANVSPEYLDVSKTLGASRLRT 193 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 II+P P V+G + G +W + +E+ TGLG +I P Sbjct: 194 IFKIIIPAALPNIVSGLRISMGISWLVIVAAEMLLG-------TGLGYFIWNEWNNLYIP 246 Query: 554 EVVLGVLIMCCFVLALN 570 +++ + I+ L L+ Sbjct: 247 NILVAIFIIGLVGLILD 263 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 15/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L L S P + +++ + L +L Sbjct: 82 GIGWNLLISLRRVAIGYTLASLIAVPLGILIGISPIAYKAFNPYVQLLKPVSPLAWLPLG 141 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + +E+ IF I S +W + + N+ + +VS++ S + Sbjct: 142 LYIFRD--------SEITGIFIILISSIWPTLTNTAFGVANVSPEYLDVSKTLGASRLRT 193 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + + +P ++P +V + +SM W +VA+EM++ G+G +I + Sbjct: 194 IFKIIIPAALPNIVSGLRISMGISWLVIVAAEMLLG-------TGLGYFIWNEWNNLYIP 246 Query: 240 AILYAMLTMLGVIFLYDQLL 259 IL A+ + V + D + Sbjct: 247 NILVAIFIIGLVGLILDSVF 266 >gi|87300722|ref|ZP_01083564.1| ABC-type nitrate/nitrite transport system permease protein [Synechococcus sp. WH 5701] gi|87284593|gb|EAQ76545.1| ABC-type nitrate/nitrite transport system permease protein [Synechococcus sp. WH 5701] Length = 276 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 13/198 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W I++ RV + ++ ++ I +G +G I P Q+L P +FP+ + Sbjct: 78 LGWQILISLQRVAIGYSLSGVVGIAIGGLLGLNRFIGKGFDPVIQVLRTVPPLAWFPIAL 137 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N ++ + W ++ N G P D+ VA + + R I+ Sbjct: 138 MVFQ----DANTSAVFVIFITSIWPVIINTAVGIRQIPQDYTNVARVLRLRKRSYIREIV 193 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 +P PY TG A G AW A + +E+ G+G +I ++ G S ++ Sbjct: 194 IPATVPYVFTGLRIAVGLAWLAIVAAEMLK------ADGGIGYFIWDAYNAGGDTSASQI 247 Query: 556 VLGVLIMCCFVLALNRFL 573 +L ++ + LAL+R + Sbjct: 248 ILAIVYVGIVGLALDRLV 265 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 105/265 (39%), Gaps = 26/265 (9%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ---------ETTVPRDIVDIVPITLD 57 I + + P + + AF++ +++ +L + +T P Sbjct: 15 FSSAILKGMVPYVICIGAFLISWQLLSAILGAARLPGPIQVVVDTWDPYISDPFYDNGGT 74 Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 L + R+ +S + L +R +G P++ +++++P L + Sbjct: 75 SKGLGWQILISLQRVAIGYSLSGVVGIAIGGLLGLNRFIGKGFDPVIQVLRTVPPLAWFP 134 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 ++ F + A +A+F IF + +W + + + IP+D V+R RL Sbjct: 135 IALMVFQD--------ANTSAVFVIFITSIWPVIINTAVGIRQIPQDYTNVARVLRLRKR 186 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P ++P + + +++ W +VA+EM+ GIG +I A Sbjct: 187 SYIREIVIPATVPYVFTGLRIAVGLAWLAIVAAEML------KADGGIGYFIWDAYNAGG 240 Query: 238 LLA---ILYAMLTMLGVIFLYDQLL 259 + I+ A++ + V D+L+ Sbjct: 241 DTSASQIILAIVYVGIVGLALDRLV 265 >gi|240137626|ref|YP_002962097.1| nitrate transport system permease protein [Methylobacterium extorquens AM1] gi|240007594|gb|ACS38820.1| nitrate transport system permease protein [Methylobacterium extorquens AM1] Length = 284 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ + D I L ++ RV + +A ++ IPVG IG P +S Sbjct: 67 VGATIWKHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 125 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P+ Q+L + PL + + + +L ++ + W +L N + G + Sbjct: 126 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSIWPMLINTVFGVAGT 181 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + ++ R +ILP P +TG + G AW + +E+ G Sbjct: 182 RKEWHNVARTLEVSPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 236 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V+ +L++ + L++ L Sbjct: 237 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 275 Score = 143 bits (362), Expect = 6e-32, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ +++L L S + L P + I++ + L ++ + Sbjct: 93 LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 149 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + L+AIF IF +W M + + ++ V+R+ +S ++ + + Sbjct: 150 -----TIKDSSLSAIFVIFICSIWPMLINTVFGVAGTRKEWHNVARTLEVSPVRRAFTVI 204 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG ++ + ++ + Sbjct: 205 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITS 258 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + V + DQLL R Sbjct: 259 ILVIGLVGMVLDQLLAR 275 >gi|315498257|ref|YP_004087061.1| nitrate abc transporter, inner membrane subunit [Asticcacaulis excentricus CB 48] gi|315416269|gb|ADU12910.1| nitrate ABC transporter, inner membrane subunit [Asticcacaulis excentricus CB 48] Length = 302 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A++ + +G ++G P Q+L P + P+ + Sbjct: 104 LFWHVLTSLSRVGIGFGLAAVCGVLLGAFLGTVDWARKGTDPIIQVLRTVPPLAWLPISL 163 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ + W I+ N + G P D+ VA +T ++ I+ Sbjct: 164 AALREAQPS----ALFVIFITSIWPIVINTMVGVRNIPQDYVNVARVLRLTPGEYFFKIM 219 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P+ TG G +W A + SE+ G G+G +I + ++++ Sbjct: 220 LPAATPHIFTGLRIGVGMSWLAIVASEMLLGG------VGIGFFIWDQYNSSRMSDIIVA 273 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 274 LVWVGLVGFVLDRLV 288 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 102/264 (38%), Gaps = 29/264 (10%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP-------- 62 RR + L+ +L+ T P + + ++ L Sbjct: 39 SKRRKLADKAGNYLMPLLTVSALLLMWEALGTAFPGGLPSPSMVLMEAQELIFDPFYDRG 98 Query: 63 -------QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + + R+ ++ + + PI+ +++++P L + Sbjct: 99 GVDKGLFWHVLTSLSRVGIGFGLAAVCGVLLGAFLGTVDWARKGTDPIIQVLRTVPPLAW 158 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L ++ P +A+F IF + +W + + + NIP+D V+R RL+ Sbjct: 159 LPISLAALREAQP--------SALFVIFITSIWPIVINTMVGVRNIPQDYVNVARVLRLT 210 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + F+ + +P + P + + + + W +VASEM++ G GIG +I Sbjct: 211 PGEYFFKIMLPAATPHIFTGLRIGVGMSWLAIVASEMLLGGV------GIGFFIWDQYNS 264 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + I+ A++ + V F+ D+L+ Sbjct: 265 SRMSDIIVALVWVGLVGFVLDRLV 288 >gi|163853891|ref|YP_001641934.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|163665496|gb|ABY32863.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] Length = 285 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 23/257 (8%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62 ++ R+ P + L F+L+ ++ R + + I +D L Sbjct: 30 VAARVLPPLVVLAGFLLLWEVLCSSPTAGL-PPPSRVVTEAWDIIIDPFYDNGGTDKGLF 88 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + R+ ++++ + TL +S L PI I+++IP L +L ++ Sbjct: 89 WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAA 148 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + P +AIF IF + +W + + + NIP+D V+ RL+ + F Sbjct: 149 FRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVK 200 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P + P + + + + W +VA+EM++ G GIG +I A + I+ Sbjct: 201 IMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEII 254 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + + F+ D+++ Sbjct: 255 VALVYVGLIGFVLDRMV 271 Score = 150 bits (378), Expect = 7e-34, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A + + +G +G + P Q+L P + PL + Sbjct: 87 LFWHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSL 146 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VA+ + ++ I+ Sbjct: 147 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIM 202 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ E+++ Sbjct: 203 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 256 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 257 LVYVGLIGFVLDRMV 271 >gi|254560198|ref|YP_003067293.1| nitrate transport system permease [Methylobacterium extorquens DM4] gi|254267476|emb|CAX23317.1| nitrate transport system permease protein [Methylobacterium extorquens DM4] Length = 284 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ + D I L ++ RV + +A ++ IPVG IG P +S Sbjct: 67 VGATIWKHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 125 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P+ Q+L + PL + + + +L ++ + W +L N + G + Sbjct: 126 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSIWPMLINTVFGVAGT 181 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + ++ R +ILP P +TG + G AW + +E+ G Sbjct: 182 RKEWLNVARTLEVSPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 236 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V+ +L++ + L++ L Sbjct: 237 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 275 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ +++L L S + L P + I++ + L ++ + Sbjct: 93 LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 149 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + L+AIF IF +W M + + ++ V+R+ +S ++ + + Sbjct: 150 -----TIKDSSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVI 204 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG ++ + ++ + Sbjct: 205 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITS 258 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + V + DQLL R Sbjct: 259 ILVIGLVGMVLDQLLAR 275 >gi|240141347|ref|YP_002965827.1| Nitrate transport permease protein [Methylobacterium extorquens AM1] gi|254563853|ref|YP_003070948.1| ni=trate transport permease [Methylobacterium extorquens DM4] gi|240011324|gb|ACS42550.1| Nitrate transport permease protein [Methylobacterium extorquens AM1] gi|254271131|emb|CAX27138.1| Nitrate transport permease protein [Methylobacterium extorquens DM4] Length = 286 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 23/257 (8%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62 ++ R+ P + L F+L+ ++ R + + I +D L Sbjct: 31 VAARVLPPLVVLAGFLLLWEVLCSSPTAGL-PPPSRVVTEAWDIIIDPFYDNGGTDKGLF 89 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + R+ ++++ + TL +S L PI I+++IP L +L ++ Sbjct: 90 WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAA 149 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + P +AIF IF + +W + + + NIP+D V+ RL+ + F Sbjct: 150 FRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVK 201 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P + P + + + + W +VA+EM++ G GIG +I A + I+ Sbjct: 202 IMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEII 255 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + + F+ D+++ Sbjct: 256 VALVYVGLIGFVLDRMV 272 Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A + + +G +G + P Q+L P + PL + Sbjct: 88 LFWHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSL 147 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VA+ + ++ I+ Sbjct: 148 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIM 203 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ E+++ Sbjct: 204 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 257 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 258 LVYVGLIGFVLDRMV 272 >gi|166364220|ref|YP_001656493.1| nitrate/nitrite transport system permease protein [Microcystis aeruginosa NIES-843] gi|166086593|dbj|BAG01301.1| nitrate/nitrite transport system permease protein [Microcystis aeruginosa NIES-843] Length = 275 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV V +A+I+ I VGI IG I I P Q+L P + P+ + Sbjct: 78 LFWQIFASLQRVAVGFTLAAIVGIAVGILIGSNALIYDAIDPIFQILRTVPPLAWLPISL 137 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N ++ W I+ N G P D+K V+ ++ ++ I+ Sbjct: 138 AAFR----NNEPSAIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEYFFNIL 193 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P PY TG G +W A + +E+ G G+G +I ++ E++L Sbjct: 194 FPATVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSMISEIILA 247 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 248 LIYVGIVGFLLDRLM 262 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + L + + + PI I++++P L +L + Sbjct: 77 GLFWQIFASLQRVAVGFTLAAIVGIAVGILIGSNALIYDAIDPIFQILRTVPPLAWLPIS 136 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F N P +AIF IF + +W + + + +P+D + VSR +LS + Sbjct: 137 LAAFRNNEP--------SAIFVIFITAIWPIIINTAVGVQQVPQDYKNVSRVLKLSKVEY 188 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F+ + P ++P + + + + W +VA+EM++ G GIG +I A + Sbjct: 189 FFNILFPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSMIS 242 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V FL D+L+ Sbjct: 243 EIILALIYVGIVGFLLDRLM 262 >gi|218532835|ref|YP_002423651.1| nitrate ABC transporter inner membrane subunit [Methylobacterium chloromethanicum CM4] gi|218525138|gb|ACK85723.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium chloromethanicum CM4] Length = 285 Score = 157 bits (396), Expect = 6e-36, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 23/257 (8%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62 ++ R+ P + L F+L+ ++ R + + I +D L Sbjct: 30 VAARVLPPLVVLAGFLLLWEVLCSSPTAGL-PPPSRVMTEAWDIIIDPFYDNGGTDKGLF 88 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + + R+ ++++ + TL +S L PI I+++IP L +L ++ Sbjct: 89 WHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSLAA 148 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + P +AIF IF + +W + + + NIP+D V+ RL+ + F Sbjct: 149 FRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVK 200 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P + P + + + + W +VA+EM++ G GIG +I A + I+ Sbjct: 201 IMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSHISEII 254 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + + F+ D+++ Sbjct: 255 VALVYVGLIGFVLDRMV 271 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A + + +G +G + P Q+L P + PL + Sbjct: 87 LFWHIAASLKRVALGFSLAVVAGVMLGTLVGQSDWAMRGLDPIFQILRTIPPLAWLPLSL 146 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W I+ N G P D++ VA+ + ++ I+ Sbjct: 147 AAFRDGQPS----AIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVIRLNPIEFFVKIM 202 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ E+++ Sbjct: 203 LPSAAPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSHISEIIVA 256 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 257 LVYVGLIGFVLDRMV 271 >gi|163850577|ref|YP_001638620.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|163662182|gb|ABY29549.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] Length = 279 Score = 157 bits (396), Expect = 6e-36, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ + D I L ++ RV + +A ++ IPVG IG P +S Sbjct: 62 VGATIWKHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P+ Q+L + PL + + + +L ++ + W +L N + G + Sbjct: 121 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSIWPMLINTVFGVAGT 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + ++ R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWLNVARTLEVSPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V+ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ +++L L S + L P + I++ + L ++ + Sbjct: 88 LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 144 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + L+AIF IF +W M + + ++ V+R+ +S ++ + + Sbjct: 145 -----TIKDSSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVI 199 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG ++ + ++ + Sbjct: 200 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITS 253 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + V + DQLL R Sbjct: 254 ILVIGLVGMVLDQLLAR 270 >gi|163761182|ref|ZP_02168258.1| nitrate ABC transporter, inner membrane subunit [Hoeflea phototrophica DFL-43] gi|162281521|gb|EDQ31816.1| nitrate ABC transporter, inner membrane subunit [Hoeflea phototrophica DFL-43] Length = 277 Score = 157 bits (396), Expect = 6e-36, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 13/225 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW + D I +G +++RV+ +A+++ IP+G IG + Sbjct: 64 AWNELSNPFYDAGPNDKGIGIQIGY-SIYRVLSGYALAALVAIPLGFLIGMSTVAYKALN 122 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + PL + + + ++ + W +L N G + D+ Sbjct: 123 PFIQVLRPISPLAWMPLALFIIQDSERS----AIFVIFICSIWPMLINTAFGVAGVRKDW 178 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + + R +ILP P VTG + G AW + +E+ G TG+ Sbjct: 179 VNVAKTHELGALRTAFMVILPAAAPTIVTGMRISIGIAWLVIVAAEMLVGG------TGI 232 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL--WHPLYLYGT 582 G Y+ V+ +L++ +AL+ L Y Sbjct: 233 GYYVWNEWNNLDLTSVIFSILMIGVVGMALDAMFGILQRLVAYSE 277 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 16/205 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+LS ++ L L S L P + +++ I L ++ + + Sbjct: 87 GYSIYRVLSGYALAALVAIPLGFLIGMSTVAYKALNPFIQVLRPISPLAWMPLALFIIQD 146 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +E +AIF IF +W M + + + +D V+++ L + + + + Sbjct: 147 --------SERSAIFVIFICSIWPMLINTAFGVAGVRKDWVNVAKTHELGALRTAFMVIL 198 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P +V M +S+ W +VA+EM+V G GIG Y+ DL ++++++ Sbjct: 199 PAAAPTIVTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLTSVIFSI 252 Query: 246 LTMLGVIFLYDQL--LFRPMIVWSN 268 L + V D + + + ++ +S Sbjct: 253 LMIGVVGMALDAMFGILQRLVAYSE 277 >gi|251789059|ref|YP_003003780.1| nitrate ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537680|gb|ACT06301.1| nitrate ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 310 Score = 157 bits (396), Expect = 7e-36, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 93/276 (33%), Gaps = 19/276 (6%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV-- 355 + P R + R + +L +L W Sbjct: 28 VTLPEAATIPPADEPAATAPRPI--WRQRLSQGVSRLLPGGIGMLLLLAVWQIAALSSKG 85 Query: 356 --AIGIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 W + I Y + + W ++ RV + +A+++ IP G IG Sbjct: 86 FPTPWQTWLAAQSIFAEPFYVAGPNDQGIGWNVLASLERVGIGFGLAALVGIPAGFLIGR 145 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +++ P LL + P+ + + + + W ++ N Sbjct: 146 FRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAE 201 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G P D+ VA ++ + R I+LP + P +TG + G AW + +E+ + G Sbjct: 202 GVRQIPQDYLNVARVLKLSEFTIMRKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG 261 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G+G +I + P +++ +L++ Sbjct: 262 ------IGIGFWIWNEWNNLNVPNIIIAILVIGVVG 291 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 99/245 (40%), Gaps = 20/245 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI---QETTVPRDIVDIVPITL---DVHSLPQYASR 67 R+ P +L + V I + G +T + + P + + + Sbjct: 61 RLLPGGIGMLLLLAVWQIAALSSKGFPTPWQTWLAAQSIFAEPFYVAGPNDQGIGWNVLA 120 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ ++ L L + R + + PI+ +++ + L +L ++ F Sbjct: 121 SLERVGIGFGLAALVGIPAGFLIGRFRFMAAMFNPIISLLRPVSPLAWLPIGLLLFQRAE 180 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P A+ + IF +W M + + + IP+D V+R +LS + + +P Sbjct: 181 P--------ASSWTIFICSIWPMILNTAEGVRQIPQDYLNVARVLKLSEFTIMRKILLPA 232 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG +I ++ I+ A+L Sbjct: 233 VLPSVLTGVRLSIGIAWLVIVAAEMLTGGI------GIGFWIWNEWNNLNVPNIIIAILV 286 Query: 248 MLGVI 252 + V Sbjct: 287 IGVVG 291 >gi|311693904|gb|ADP96777.1| nitrate transport system permease protein [marine bacterium HP15] Length = 275 Score = 156 bits (395), Expect = 8e-36, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 11/216 (5%) Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 I +AW + D I L +++RV+ + A I +PVG IG P + Sbjct: 57 AVIKLAWAELSDPFYDAGANDKGIGIQL-AYSVYRVLTGYLAAMAIALPVGFLIGMSPLM 115 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 + P+ Q+L + PL + + + ++ + W +L N G + Sbjct: 116 YKALNPYIQVLRPISPLAWMPLALFIIQDSDAS----AIFVIFICSIWPMLLNTAFGVAN 171 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 D+ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 172 VRQDWVNVARTHELGPLRTAITVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG---- 227 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 TG+G Y+ V+ +L++ + L+ Sbjct: 228 --TGIGYYVWNEWNNLDLASVIFSILMIGVVGMLLD 261 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 88/197 (44%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+L+ + ++ L S + L P + +++ I L ++ + Sbjct: 84 LAYSVYRVLTGYLAAMAIALPVGFLIGMSPLMYKALNPYIQVLRPISPLAWMPLALFIIQ 143 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + ++ +AIF IF +W M + + N+ +D V+R+ L + + Sbjct: 144 D--------SDASAIFVIFICSIWPMLLNTAFGVANVRQDWVNVARTHELGPLRTAITVI 195 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG Y+ DL +++++ Sbjct: 196 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLASVIFS 249 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + V L D L + Sbjct: 250 ILMIGVVGMLLDLALGK 266 >gi|330990546|ref|ZP_08314504.1| Nitrate transport permease protein nrtB [Gluconacetobacter sp. SXCC-1] gi|329762449|gb|EGG78935.1| Nitrate transport permease protein nrtB [Gluconacetobacter sp. SXCC-1] Length = 286 Score = 156 bits (395), Expect = 9e-36, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 11/217 (5%) Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 + A Q++ ++ D + W ++ RV + +A ++ +P+G IG RP I Sbjct: 70 VASALQALHAPFHNNGPSD-RGIGWQVGASLLRVAIGYGLAVVVAVPLGFLIGLRPVIRR 128 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + PF Q+L + PL + + N ++ + W I+ N G + Sbjct: 129 AVDPFIQILRPISPLAWMPLALYTIR----NAEGCGIFVIFICSLWPIVLNTAFGVGSVR 184 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 ++ VA + + R +++LP P +TG G AW A + +E+ + + Sbjct: 185 REWLNVARTLEVGWARRVLFVLLPAAAPTIITGMRIGLGIAWLAIVAAEML------VGS 238 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +G+G ++ S V+L VL++ + L+ L Sbjct: 239 SGIGYFVWNQWNNLSLSNVLLAVLLIGFTGMVLDGAL 275 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 80/203 (39%), Gaps = 14/203 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + LR+ ++++ L + + P + I++ I L ++ Sbjct: 87 SDRGIGWQVGASLLRVAIGYGLAVVVAVPLGFLIGLRPVIRRAVDPFIQILRPISPLAWM 146 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + N AE IF IF +W + + + ++ R+ V+R+ + Sbjct: 147 PLALYTIRN--------AEGCGIFVIFICSLWPIVLNTAFGVGSVRREWLNVARTLEVGW 198 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++ ++ +P + P ++ M + + W +VA+EM+V GIG ++ Sbjct: 199 ARRVLFVLLPAAAPTIITGMRIGLGIAWLAIVAAEMLVGSS------GIGYFVWNQWNNL 252 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 L +L A+L + + D L Sbjct: 253 SLSNVLLAVLLIGFTGMVLDGAL 275 >gi|86605329|ref|YP_474092.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp. JA-3-3Ab] gi|86553871|gb|ABC98829.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp. JA-3-3Ab] Length = 319 Score = 156 bits (395), Expect = 1e-35, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 10/194 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A ++ + G+ IG + + P Q+L P + P+ + Sbjct: 123 LFWQIWASLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISL 182 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + N ++ W IL N + G P D++ VA ++GW+++ I+ Sbjct: 183 AAFR----DANPSAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIV 238 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P PY TG G +W A + +E+ G G+G +I ++ E++L Sbjct: 239 FPATVPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILA 292 Query: 559 VLIMCCFVLALNRF 572 ++ + L L+R Sbjct: 293 LIYVGMVGLLLDRI 306 Score = 153 bits (387), Expect = 8e-35, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 14/223 (6%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L Q+T P + L + R+ ++ L V + +R Sbjct: 98 LQVWQDTWDPLIKDPFFDYGGNAKGLFWQIWASLRRVFIGFALAGLVGVVGGMIIGVNRW 157 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 L L PI +++++P L +L ++ F + P +AIF IF + +W + + Sbjct: 158 LYEALDPIFQVLRTVPPLAWLPISLAAFRDANP--------SAIFVIFITALWPILINTV 209 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + IP+D V+R R+SGW+ F+ + P ++P + + + + W +VA+EM++ Sbjct: 210 VGVQQIPQDYRNVARIVRMSGWKYFFKIVFPATVPYIFTGLRIGVGLSWLAIVAAEMLIG 269 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G GIG +I A + I+ A++ + V L D++ Sbjct: 270 GV------GIGFFIWDAWNSSRISEIILALIYVGMVGLLLDRI 306 >gi|146339772|ref|YP_001204820.1| putative nitrate ABC transporter permease (ntrB-like protein) [Bradyrhizobium sp. ORS278] gi|146192578|emb|CAL76583.1| putative nitrate ABC transporter (permease protein) (ntrB-like protein) [Bradyrhizobium sp. ORS278] Length = 279 Score = 156 bits (395), Expect = 1e-35, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ + D I L ++ RV++ +IA I IP+G IG P +S Sbjct: 62 VGAKLWEHLKRPFYDNGPNDKGLGIQL-AFSIGRVMLGYLIAVAIAIPLGFLIGMSPLMS 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + +L ++ + W +L N G ++ Sbjct: 121 KALDPFIQILKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLINTAFGVASV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + +R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWINVARTLEVGNFRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSITNVIIAILLIGVVGMVLDQLLAR 270 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 98/236 (41%), Gaps = 23/236 (9%) Query: 35 LLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRMLSAMVISLLFTFV 85 G P D+ + L + L + + R++ +I++ Sbjct: 49 ATQGKSAMPGPLDVGAKLWEHLKRPFYDNGPNDKGLGIQLAFSIGRVMLGYLIAVAIAIP 108 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L S + L P + I++ I L ++ + + + L+AIF IF Sbjct: 109 LGFLIGMSPLMSKALDPFIQILKPISPLAWMPLALY--------TIKDSSLSAIFVIFIC 160 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 VW M + + ++ ++ V+R+ + +++ + + +P + P ++ M +S+ W Sbjct: 161 SVWPMLINTAFGVASVRKEWINVARTLEVGNFRRAFTVILPAAAPTILTGMRISIGIAWL 220 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 +VA+EM+V G GIG ++ + ++ A+L + V + DQLL R Sbjct: 221 VIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILLIGVVGMVLDQLLAR 270 >gi|299530863|ref|ZP_07044277.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni S44] gi|298721084|gb|EFI62027.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni S44] Length = 290 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V ++ RV + A IP+G IG P + PF Q+L + P+ + Sbjct: 95 VGIQVAYSLGRVALGFGFAVAFAIPLGFLIGMSPLAYRALDPFIQVLKPISPLAWMPIAL 154 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ ++ + W +L N G + ++ VA++ + R +I Sbjct: 155 YTIK----DSSISGIFVIFICSIWPMLTNTAFGVAGVRREWLNVANTLQVRPMRKAIEVI 210 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG + G AW + +E+ G TG+G ++ S V+ Sbjct: 211 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLSLANVIFA 264 Query: 559 VLIMCCFVLALNRFL 573 +L++ +AL+ Sbjct: 265 ILVIGLVGMALDMLF 279 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 14/196 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + + R+ ++ F L S L P + +++ I L ++ + Sbjct: 100 AYSLGRVALGFGFAVAFAIPLGFLIGMSPLAYRALDPFIQVLKPISPLAWMPIALY---- 155 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + + ++ IF IF +W M + + + R+ V+ + ++ +K + + Sbjct: 156 ----TIKDSSISGIFVIFICSIWPMLTNTAFGVAGVRREWLNVANTLQVRPMRKAIEVIL 211 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P ++ M +SM W +VA+EM+V G GIG ++ L +++A+ Sbjct: 212 PAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSLANVIFAI 265 Query: 246 LTMLGVIFLYDQLLFR 261 L + V D L + Sbjct: 266 LVIGLVGMALDMLFAK 281 >gi|86605595|ref|YP_474358.1| nitrate ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] gi|86554137|gb|ABC99095.1| nitrate ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 275 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ ++ RV + A+++ I +GI +G I+ + P Q L + P+ + Sbjct: 80 LLRQTLASLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFLRMVAPLAWVPISL 139 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ + W IL N G P D+ V+ ++ ++ ++ Sbjct: 140 AA----SQRNEPAALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVL 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP + PY TG G +W A I +E+ G G+G +I ++ ++ E+++ Sbjct: 196 LPSVLPYMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVA 250 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L+R + Sbjct: 251 VIYIGAVGLLLDRLV 265 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 105/255 (41%), Gaps = 22/255 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILL---------HGIQETTVPRDIVDIVPITLDVHSLPQY 64 +I P + ++ F+L+ I+ + E + + + + L + Sbjct: 24 QILPPVVGIVGFLLIWQILASANLIRLPGPWDVWMDERSRYLILHPLYRNSDLDQGLLRQ 83 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ + L L S + L PI ++ + L ++ ++ Sbjct: 84 TLASLQRVAIGYCSAALVGITLGILVGSSVWINRALDPIFQFLRMVAPLAWVPISLAASQ 143 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 P AA+F IF + +W + + + IP D VS+ +LS F+ + Sbjct: 144 RNEP--------AALFVIFITSIWPILINTAVGVRQIPEDYINVSKVLKLSKVDFFFKVL 195 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +P + + + + W ++A+E+++ G +PGIG +I A ++ + I+ A Sbjct: 196 LPSVLPYMFTGLRIGIGLSWLAIIAAEIVMSG-----VPGIGFFIWDAYQQNYVTEIIVA 250 Query: 245 MLTMLGVIFLYDQLL 259 ++ + V L D+L+ Sbjct: 251 VIYIGAVGLLLDRLV 265 >gi|154246559|ref|YP_001417517.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160644|gb|ABS67860.1| nitrate ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 279 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W ++ D + ++ RV + ++A ++ +P+G IG P Sbjct: 62 VAAKLWDNLKRPFYDNGPNDKG-LGLQLLYSIGRVALGYVLAVLVAVPIGFLIGMSPLAY 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + L+ ++ + W +L N G A Sbjct: 121 RALDPFIQVLKPISPLAWMPLALYTIKDSALS----AIFVIFICSVWPMLLNTAFGVGAV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + WR +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWLNVARTLEVGPWRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++G+L + + L+ L Sbjct: 232 -TGIGYFVWNEWNNLSIANVIVGILFIGVVGMVLDLILAR 270 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 87/205 (42%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + L + R+ V+++L L S L P + +++ I L ++ Sbjct: 80 NDKGLGLQLLYSIGRVALGYVLAVLVAVPIGFLIGMSPLAYRALDPFIQVLKPISPLAWM 139 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + + L+AIF IF VW M + + + ++ V+R+ + Sbjct: 140 PLALY--------TIKDSALSAIFVIFICSVWPMLLNTAFGVGAVRKEWLNVARTLEVGP 191 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W++ + + +P + P ++ M +S+ W +VA+EM+V G GIG ++ Sbjct: 192 WRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 + ++ +L + V + D +L R Sbjct: 246 SIANVIVGILFIGVVGMVLDLILAR 270 >gi|239993923|ref|ZP_04714447.1| putative nitrate ABC transporter, permease protein [Alteromonas macleodii ATCC 27126] Length = 219 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 16/198 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ V+V +IAS++ +PVGI G + I P QL + PLV VS + Sbjct: 12 SLYTVMVGFLIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 71 Query: 446 LNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ + + + + W L N G S D V+ +T + I+ Sbjct: 72 VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPFAHLTKIV 131 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 LP P TG + G W I +E+ + + GLG ++ + + G S + Sbjct: 132 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 185 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ VL + L+R + Sbjct: 186 MVAVLTIGAIGFVLDRLM 203 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 89/207 (42%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + ++ +I+ + L S+ + P++ + + + L +L + LY Sbjct: 12 SLYTVMVGFLIASVVAVPVGILCGLSKSAYTAINPLIQLFKPVSPLAWLPLVTMVVSALY 71 Query: 128 PGKVIG---AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + + F + +W + + NI +DL VS+ RL+ + + Sbjct: 72 VSDDPAFSKSFVTSAFTVSLCCLWPTLINTAVGVSNIDKDLINVSKVLRLTPFAHLTKIV 131 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 132 LPSSIPMIFTGLRLSLGIGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSESLARI 185 Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266 + A+LT+ + F+ D+L+ + + W Sbjct: 186 MVAVLTIGAIGFVLDRLMLSIQRAVSW 212 >gi|114766329|ref|ZP_01445315.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Pelagibaca bermudensis HTCC2601] gi|114541446|gb|EAU44492.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Roseovarius sp. HTCC2601] Length = 360 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 85/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V +I S + IP+GI G P+ +S I P Q+ Sbjct: 138 VKDIAYTGAPSYYEQIWTSIKTVFFGFLIGSCVAIPLGILAGLSPYANSAINPLVQIFKP 197 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V +S + L ++ + + W L N G ++ D Sbjct: 198 VSPLAWLPIVTMIISAAVATNDGLFSKSFLISAITVTLCSLWPTLINTALGVASIDKDLV 257 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + W ++LP P TG + G W I +E+ + + GLG Sbjct: 258 NVSKVLKMNTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 311 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S ++++ V + L+R ++ L+ + Sbjct: 312 KFVWDEFQNGSSSSLAKIMVAVFTIGIIGFLLDRVMFALQSLFTFSNNR 360 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 12/195 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF---MNLYP 128 + +I LA S + P++ I + + L +L + + Sbjct: 160 VFFGFLIGSCVAIPLGILAGLSPYANSAINPLVQIFKPVSPLAWLPIVTMIISAAVATND 219 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VS+ +++ W K L +P + Sbjct: 220 GLFSKSFLISAITVTLCSLWPTLINTALGVASIDKDLVNVSKVLKMNTWTKITKLVLPSA 279 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + L I+ A+ Sbjct: 280 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSSSLAKIMVAV 333 Query: 246 LTMLGVIFLYDQLLF 260 T+ + FL D+++F Sbjct: 334 FTIGIIGFLLDRVMF 348 >gi|297539843|ref|YP_003675612.1| nitrate ABC transporter inner membrane subunit [Methylotenera sp. 301] gi|297259190|gb|ADI31035.1| nitrate ABC transporter, inner membrane subunit [Methylotenera sp. 301] Length = 325 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV + +A+++ IP+G IG +S P LL + P+ + Sbjct: 131 VGWNILASLQRVALGFSLAALVGIPLGFIIGRFEFMSRMTSPIISLLRPVSPLAWLPIGL 190 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N ++ W ++ N G S P D+ VA +++ W+ I+ Sbjct: 191 LVFKAA----NPAAIWVIFISAIWPMIINTSVGVSKVPQDYMNVAKVLNLSEWKIVTKIL 246 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG + G AW + +E+ + G G+G ++ + + +++ Sbjct: 247 FPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVEHIIIA 300 Query: 559 VLIMCCFVLALN 570 + ++ L L Sbjct: 301 IFVVGIVGLLLE 312 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 105/267 (39%), Gaps = 28/267 (10%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYAS 66 + P +F +L + V +I+ + + + + D + Sbjct: 79 VLPPVFGVLLLLAVWTLISHQSPNLPGPL--KTWYSAIELFSDPFYVNGPNDQGVGWNIL 136 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++ L + + + + PI+ +++ + L +L ++ F Sbjct: 137 ASLQRVALGFSLAALVGIPLGFIIGRFEFMSRMTSPIISLLRPVSPLAWLPIGLLVFKAA 196 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P AAI+ IF S +W M + + +P+D V++ LS W+ + P Sbjct: 197 NP--------AAIWVIFISAIWPMIINTSVGVSKVPQDYMNVAKVLNLSEWKIVTKILFP 248 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 F +P ++ + +S+ W +VA+EM+ G GIG ++ ++ I+ A+ Sbjct: 249 FVLPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHIIIAIF 302 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLE 273 + V L + L + + KF E Sbjct: 303 VVGIVGLLLEFALTQI----AKKFSYE 325 >gi|163734362|ref|ZP_02141802.1| nitrate ABC transporter, permease component [Roseobacter litoralis Och 149] gi|161392370|gb|EDQ16699.1| nitrate ABC transporter, permease component [Roseobacter litoralis Och 149] Length = 357 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 86/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V + Y ++ V +IASI+ IP+GI G ++ + P Q+ Sbjct: 135 VRNRIYTGKPTYYDQIWTSIKTVFFGFMIASIVAIPLGIAAGLSVTANAALNPLIQIFKP 194 Query: 428 FPANVFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS + + W ++ + + W L N G S+ D Sbjct: 195 VSPLAWLPIVTMIVSAVYTTNDGWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLV 254 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + + ++LP P TG + G W I +E+ + + GLG Sbjct: 255 SVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S +++ V + L+R ++ ++ + Sbjct: 309 KFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYALQSMFTFSNNR 357 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128 + +I+ + A S L P++ I + + L +L + +Y Sbjct: 157 VFFGFMIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTND 216 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VSR +++ + K L +P + Sbjct: 217 GWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSA 276 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ A+ Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330 Query: 246 LTMLGVIFLYDQLL 259 T+ + FL D+++ Sbjct: 331 FTIGIIGFLLDRVM 344 >gi|218529302|ref|YP_002420118.1| nitrate ABC transporter inner membrane subunit [Methylobacterium chloromethanicum CM4] gi|218521605|gb|ACK82190.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium chloromethanicum CM4] Length = 279 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ + D I L ++ RV + +A ++ IPVG IG P +S Sbjct: 62 VGATIWKHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P+ Q+L + PL + + + +L ++ + W +L N + G + Sbjct: 121 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSIWPMLINTVFGVAGT 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + ++ R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWLNVARTLEVSPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G + S V+ +L++ + L++ L Sbjct: 232 -TGIGYFAWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ +++L L S + L P + I++ + L ++ + Sbjct: 88 LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 144 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + L+AIF IF +W M + + ++ V+R+ +S ++ + + Sbjct: 145 -----TIKDSSLSAIFVIFICSIWPMLINTVFGVAGTRKEWLNVARTLEVSPVRRAFTVI 199 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG + + ++ + Sbjct: 200 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFAWNEWNNLSITNVITS 253 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + V + DQLL R Sbjct: 254 ILVIGLVGMVLDQLLAR 270 >gi|86749177|ref|YP_485673.1| nitrate transport permease [Rhodopseudomonas palustris HaA2] gi|86572205|gb|ABD06762.1| nitrate transport permease [Rhodopseudomonas palustris HaA2] Length = 279 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ I D I LG ++ RV + +IA + IP+G IG P ++ Sbjct: 62 VGAKLWEHIQRPFYDNGPNDKGLGIQLGY-SIARVAIGYLIAVAVAIPLGFLIGMSPLMN 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + + +L ++ + W +L N G ++ Sbjct: 121 KALDPFIQVLKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLLNTAFGVASV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSIVNVIIAILLIGVVGMLLDQILAR 270 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 90/205 (43%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + L + R+ +I++ L S + L P + +++ I L ++ Sbjct: 80 NDKGLGIQLGYSIARVAIGYLIAVAVAIPLGFLIGMSPLMNKALDPFIQVLKPISPLAWM 139 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + + L+AIF IF VW M + + ++ ++ V+R+ + Sbjct: 140 PLALY--------TIKDSSLSAIFVIFICSVWPMLLNTAFGVASVRKEWINVARTLEVGN 191 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++ + + +P + P ++ M +S+ W +VA+EM+V G GIG ++ Sbjct: 192 VRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 245 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 ++ ++ A+L + V L DQ+L R Sbjct: 246 SIVNVIIAILLIGVVGMLLDQILAR 270 >gi|83649325|ref|YP_437760.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83637368|gb|ABC33335.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Hahella chejuensis KCTC 2396] Length = 338 Score = 155 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 16/212 (7%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 TY + +++ V V +A +I +PVG+ G + + + P Q+ Sbjct: 117 TYNGRPTYLDQIVTSLYTVFVGFSLAVLIAVPVGVVCGLSKTMYAAVNPLIQIFKPVSPL 176 Query: 432 VFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + PLV VS ++ + ++ + W L N + G S D V+ Sbjct: 177 AWLPLVTMVVSAVYVTDDPLFEKSFVNSAITVTLCCMWPTLVNTVVGVSGLDKDLNNVSL 236 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 ++ R ++LP P TG + G W I +E+ + + GLG ++ Sbjct: 237 VLRLSWTTKVRKVVLPFAVPMIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVW 290 Query: 545 ESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + + G S +++ V + AL+R + Sbjct: 291 DEFQNGSSNSLGRIMVAVFTIGFIGFALDRVM 322 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 85/207 (41%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + +++L + S+ + + P++ I + + L +L + +Y Sbjct: 131 SLYTVFVGFSLAVLIAVPVGVVCGLSKTMYAAVNPLIQIFKPVSPLAWLPLVTMVVSAVY 190 Query: 128 PGKVIGAELAAI---FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E + + + +W + + + +DL VS RLS K + Sbjct: 191 VTDDPLFEKSFVNSAITVTLCCMWPTLVNTVVGVSGLDKDLNNVSLVLRLSWTTKVRKVV 250 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +PF++P + M +S+ GW ++A+EM+ PG+G ++ + L I Sbjct: 251 LPFAVPMIFTGMRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 304 Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266 + A+ T+ + F D+++ + I W Sbjct: 305 MVAVFTIGFIGFALDRVMLAIQRRIAW 331 >gi|254438593|ref|ZP_05052087.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198254039|gb|EDY78353.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 357 Score = 155 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 83/211 (39%), Gaps = 18/211 (8%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ V +IASII IP+GI G ++ + P Q+ + P+V VS + Sbjct: 153 SIKTVFFGFLIASIIAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVY 212 Query: 446 LNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + W ++ + + W L N G S+ D V+ + + ++ Sbjct: 213 TTNDGWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLV 272 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG---SFPEV 555 LP P TG + G W I +E+ + + GLG ++ + + G S + Sbjct: 273 LPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARI 326 Query: 556 VLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ V + L+R ++ ++ + Sbjct: 327 MVAVFTIGIIGFLLDRVMYALQSMFTFSNSR 357 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128 + +I+ + A S L P++ I + + L +L + +Y Sbjct: 157 VFFGFLIASIIAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTND 216 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VSR +++ + K L +P + Sbjct: 217 GWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSA 276 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ A+ Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330 Query: 246 LTMLGVIFLYDQLL 259 T+ + FL D+++ Sbjct: 331 FTIGIIGFLLDRVM 344 >gi|158338271|ref|YP_001519448.1| nitrate ABC transporter permease [Acaryochloris marina MBIC11017] gi|158308512|gb|ABW30129.1| nitrate ABC transporter, permease protein [Acaryochloris marina MBIC11017] Length = 276 Score = 155 bits (393), Expect = 2e-35, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 11/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + L + W ++ RV + +ASII +P+GI +G + P+ QLL + Sbjct: 74 PNDLGIGWNLLTSLRRVAIGYTLASIIAVPLGILLGMSRVAAKAFNPYVQLLKPVSPLAW 133 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + N +++ + W L N + G + ++ +V+ + + R Sbjct: 134 LPLGLYIFR----NSENTGVFIILISSIWPTLVNTVFGVANVSPEYLDVSKTLGASKLRT 189 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 +I+P P + G + G AW + +E+ +GLG ++ S Sbjct: 190 VFKVIIPAALPNIIAGLRISMGIAWLVIVAAEMLLG-------SGLGYFVWNEWNNLSIS 242 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++ + I+ + L++ Sbjct: 243 NILVAIFIIGLVGIVLDQIF 262 Score = 136 bits (344), Expect = 8e-30, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 80/200 (40%), Gaps = 15/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ + L SR P + +++ + L +L Sbjct: 78 GIGWNLLTSLRRVAIGYTLASIIAVPLGILLGMSRVAAKAFNPYVQLLKPVSPLAWLPLG 137 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F N +E +F I S +W + + N+ + +VS++ S + Sbjct: 138 LYIFRN--------SENTGVFIILISSIWPTLVNTVFGVANVSPEYLDVSKTLGASKLRT 189 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + + +P ++P ++ + +SM W +VA+EM++ G+G ++ + Sbjct: 190 VFKVIIPAALPNIIAGLRISMGIAWLVIVAAEMLLGS-------GLGYFVWNEWNNLSIS 242 Query: 240 AILYAMLTMLGVIFLYDQLL 259 IL A+ + V + DQ+ Sbjct: 243 NILVAIFIIGLVGIVLDQIF 262 >gi|22298894|ref|NP_682141.1| nitrate/nitrite transport system permease protein [Thermosynechococcus elongatus BP-1] gi|22295075|dbj|BAC08903.1| nitrate/nitrite transport system permease protein [Thermosynechococcus elongatus BP-1] Length = 281 Score = 155 bits (393), Expect = 2e-35, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 10/193 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A++I + +G+ IG + + P Q+L P + P+ + Sbjct: 82 LGWQILTSLRRVAIGFSLAAMIGVGLGMLIGSSRALYDAVDPILQVLRPVPPLAWLPIAL 141 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ W I+ N I G P D+K VA ++ ++ I+ Sbjct: 142 AALR----DNEPAAIFVIFITAIWPIIINTIVGVQQIPKDYKNVARVLRLSRKDYFLNIL 197 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P PY TG G +W A + +E+ G G+G +I ++ E+++ Sbjct: 198 VPATVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISEIIVA 251 Query: 559 VLIMCCFVLALNR 571 V+ + L L+R Sbjct: 252 VIYVGIVGLVLDR 264 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 25/254 (9%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV---------PITLDVHSLPQ 63 R++ + +F+LV +++ G+ P ++ + L Sbjct: 27 RKVILGSLGIFSFLLVWQFLSMA--GVFRLPTPLTVLTETWDLIIAPFYQGSGTDVGLGW 84 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + R+ ++ + L SR L + PIL +++ +P L +L + Sbjct: 85 QILTSLRRVAIGFSLAAMIGVGLGMLIGSSRALYDAVDPILQVLRPVPPLAWLPIALAAL 144 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + P AAIF IF + +W + + + IP+D + V+R RLS F + Sbjct: 145 RDNEP--------AAIFVIFITAIWPIIINTIVGVQQIPKDYKNVARVLRLSRKDYFLNI 196 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 VP ++P + + + + W +VA+EM++ G GIG +I A + I+ Sbjct: 197 LVPATVPYVFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLISEIIV 250 Query: 244 AMLTMLGVIFLYDQ 257 A++ + V + D+ Sbjct: 251 AVIYVGIVGLVLDR 264 >gi|296101975|ref|YP_003612121.1| nitrate ABC transporter, inner membrane subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056434|gb|ADF61172.1| nitrate ABC transporter, inner membrane subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 293 Score = 155 bits (393), Expect = 2e-35, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 10/197 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV V +A+++ IP+G IG S P LL + Sbjct: 92 PNDMGIGWNVLASLQRVAVGFGLAALVGIPLGFLIGRFTFFSRMFSPLIALLRPVSPLAW 151 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 152 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 207 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 208 LRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVE 261 Query: 554 EVVLGVLIMCCFVLALN 570 +++ ++I+ L L Sbjct: 262 NILIAIVIIGVVGLLLE 278 Score = 146 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 18/213 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L L + + P++ +++ + L +L Sbjct: 96 GIGWNVLASLQRVAVGFGLAALVGIPLGFLIGRFTFFSRMFSPLIALLRPVSPLAWLPIG 155 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P A+ + IF +W M + + + IP+D V+R +LS W Sbjct: 156 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 207 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + P +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 208 LRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVE 261 Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269 IL A++ + V L +Q L+ R W K Sbjct: 262 NILIAIVIIGVVGLLLEQGLMLIARRF-SWQEK 293 >gi|271501225|ref|YP_003334250.1| nitrate ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344780|gb|ACZ77545.1| nitrate ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 309 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 13/212 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 W + I Y + + W ++ RV + +A+++ IP G IG I Sbjct: 89 WQTWLAAQSIFADPFYVAGPNDQGIGWNVLASLKRVGIGFGLAALVGIPAGFLIGRFRFI 148 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ P LL + P+ + + + + W ++ N G Sbjct: 149 AAMFNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRQ 204 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ + R I+LP + P +TG + G AW + +E+ + G Sbjct: 205 IPQDYLNVARVLKLSEFAIMRTILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG---- 260 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G+G +I + P ++ +L++ Sbjct: 261 --IGIGFWIWNEWNNLNVPNIITAILVIGVVG 290 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 14/196 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R+ ++ L L + R + + PI+ +++ + L +L Sbjct: 109 NDQGIGWNVLASLKRVGIGFGLAALVGIPAGFLIGRFRFIAAMFNPIISLLRPVSPLAWL 168 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P A+ + IF +W M + + + IP+D V+R +LS Sbjct: 169 PIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRQIPQDYLNVARVLKLSE 220 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + + +P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 221 FAIMRTILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGGI------GIGFWIWNEWNNL 274 Query: 237 DLLAILYAMLTMLGVI 252 ++ I+ A+L + V Sbjct: 275 NVPNIITAILVIGVVG 290 >gi|295095647|emb|CBK84737.1| nitrate ABC transporter, permease protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 292 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 10/197 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV + +A++ IP+G IG S P LL + Sbjct: 91 PNDMGIGWNVLASLQRVAIGFGLAAMAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAW 150 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 151 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 206 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 207 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVE 260 Query: 554 EVVLGVLIMCCFVLALN 570 +++ ++I+ L L Sbjct: 261 NILIAIVIIGVVGLLLE 277 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 18/213 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ + L + + P++ +++ + L +L Sbjct: 95 GIGWNVLASLQRVAIGFGLAAMAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAWLPIG 154 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P A+ + IF +W M + + + IP+D V+R +LS W Sbjct: 155 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 206 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + P +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 207 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVE 260 Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269 IL A++ + V L +Q L+ R W K Sbjct: 261 NILIAIVIIGVVGLLLEQGLMLIARRF-SWQEK 292 >gi|222082145|ref|YP_002541510.1| nitrate ABC transporter [Agrobacterium radiobacter K84] gi|221726824|gb|ACM29913.1| nitrate ABC transporter [Agrobacterium radiobacter K84] Length = 297 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 90/214 (42%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ I Y + QD+ + W I++ RV +A+I + +G IG + Sbjct: 81 SYDLIAYPFFYNGPQDIG-LAWRVLISLQRVAYGFGLAAIAGVLIGALIGQSIWAMRGLD 139 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL ++ N + ++ + W ++ N G P D+ Sbjct: 140 PIFQILRTVPPLAWLPLSLAAFQ----NSSPSAIFVIFITSIWPVIINTAVGVRNIPQDY 195 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + ++ I++P PY TG G +W A + +E+ + G G+ Sbjct: 196 RNVARVLRLNQIEFFFRIMVPAAAPYIFTGLRIGIGLSWLAIVAAEMLTGG------VGI 249 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ P++++ + + L++ + Sbjct: 250 GFFIWDAWNSSRLPDIIVALTYIGITGFILDKLV 283 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 21/254 (8%) Query: 13 RRIFPNIFDLLAFVLVIGII-----NILLHGIQETTVPRDIVDIVPITLDVH--SLPQYA 65 R + P + L+ + V ++ L Q D++ L Sbjct: 44 RAVVPPLVVLIILLGVWQLLCEQPGASLPPPSQVWQESYDLIAYPFFYNGPQDIGLAWRV 103 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ ++ + + L +S L PI I++++P L +L ++ F N Sbjct: 104 LISLQRVAYGFGLAAIAGVLIGALIGQSIWAMRGLDPIFQILRTVPPLAWLPLSLAAFQN 163 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF IF + +W + + + NIP+D V+R RL+ + F+ + V Sbjct: 164 SSP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVARVLRLNQIEFFFRIMV 215 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P + + + + W +VA+EM+ G GIG +I A L I+ A+ Sbjct: 216 PAAAPYIFTGLRIGIGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLPDIIVAL 269 Query: 246 LTMLGVIFLYDQLL 259 + F+ D+L+ Sbjct: 270 TYIGITGFILDKLV 283 >gi|83953214|ref|ZP_00961936.1| putative nitrate transporter [Sulfitobacter sp. NAS-14.1] gi|83842182|gb|EAP81350.1| putative nitrate transporter [Sulfitobacter sp. NAS-14.1] Length = 357 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V+ +IASI+ IP+GI G ++ + P Q+ Sbjct: 135 VRDRAYTGKPTYYDQIWTSIKTVLFGFLIASIVAIPLGIAAGLSVTANAALNPLIQIFKP 194 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS + + L ++ + + W L N G ++ D Sbjct: 195 VSPLAWLPIVTMIVSAVYSTNDGMFSKSFLISAITVTLCSLWPTLINTSLGVASIDKDLV 254 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + + ++LP P TG + G W I +E+ + + GLG Sbjct: 255 SVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S +++ VL + L+R ++ ++ + Sbjct: 309 KFVWDEFQNGSSQSLARIMVAVLTIGIIGFLLDRVMYALQSMFTFSNNR 357 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY---P 128 +L +I+ + A S L P++ I + + L +L + +Y Sbjct: 157 VLFGFLIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYSTND 216 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VSR +++ + K L +P + Sbjct: 217 GMFSKSFLISAITVTLCSLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSA 276 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ A+ Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330 Query: 246 LTMLGVIFLYDQLL 259 LT+ + FL D+++ Sbjct: 331 LTIGIIGFLLDRVM 344 >gi|289207851|ref|YP_003459917.1| nitrate ABC transporter inner membrane subunit [Thioalkalivibrio sp. K90mix] gi|288943482|gb|ADC71181.1| nitrate ABC transporter, inner membrane subunit [Thioalkalivibrio sp. K90mix] Length = 311 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W+ I + DV + W ++ RV +A + I +G+ +G + Sbjct: 95 TWELIVNPFYDYGGNDVG-MAWQLLASLERVAYGYALAVVAGIGLGVLVGQSTWAMRGLD 153 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + P+ ++ + + ++ W I+ N G D+ Sbjct: 154 PLFQVLRTVPPLAWLPISLAAFQASNPS----AIFVIFITAIWPIIINTSVGIRNISQDY 209 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + G+ ++ I+LP PY +G G AW A + +E+ G G+ Sbjct: 210 VNVARVLRLNGFEYFTKIMLPAAAPYVFSGLRIGIGLAWLAIVAAEMLIGG------VGI 263 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ ++VL ++ + L+R + Sbjct: 264 GFFIWDAWNASMLSDIVLALVYVGLVGFFLDRLV 297 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 108/252 (42%), Gaps = 21/252 (8%) Query: 15 IFPNIFDLLAFVLVIGIIN----ILLHGIQETTVPRDIVDIVPI---TLDVHSLPQYASR 67 + P + F+L+ ++ +L G + + + P + + Sbjct: 60 VLPPVIVTAIFLLLWEMMTSSQGAVLPGPSQVITDTWELIVNPFYDYGGNDVGMAWQLLA 119 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ ++++ L +S L P+ +++++P L +L ++ F Sbjct: 120 SLERVAYGYALAVVAGIGLGVLVGQSTWAMRGLDPLFQVLRTVPPLAWLPISLAAFQASN 179 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P +AIF IF + +W + + + NI +D V+R RL+G++ F + +P Sbjct: 180 P--------SAIFVIFITAIWPIIINTSVGIRNISQDYVNVARVLRLNGFEYFTKIMLPA 231 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + P + + + + W +VA+EM++ G GIG +I A L I+ A++ Sbjct: 232 AAPYVFSGLRIGIGLAWLAIVAAEMLIGGV------GIGFFIWDAWNASMLSDIVLALVY 285 Query: 248 MLGVIFLYDQLL 259 + V F D+L+ Sbjct: 286 VGLVGFFLDRLV 297 >gi|289208148|ref|YP_003460214.1| nitrate ABC transporter inner membrane subunit [Thioalkalivibrio sp. K90mix] gi|288943779|gb|ADC71478.1| nitrate ABC transporter, inner membrane subunit [Thioalkalivibrio sp. K90mix] Length = 281 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + +++RV++ +A++I IP G IG P ++ PF Q+L + PL + Sbjct: 86 IGIQLGYSIYRVLLGFFLAALIAIPFGFVIGMSPLLNKAFDPFIQVLKPISPLAWMPLAL 145 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + N+ ++ + W +L N G ++ ND+ VA + ++ R +I Sbjct: 146 FVIR----DSNISAIFVIFICSIWPMLVNTAYGVASVRNDWLNVAKTHELSKVRTAFTVI 201 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG + G AW + +E+ G TG+G YI V+ Sbjct: 202 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGG------TGIGYYIWNQWNNLDLASVIFA 255 Query: 559 VLIMCCFVLALN 570 ++++ L+ Sbjct: 256 IVMIGIIGFLLD 267 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 14/192 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+L ++ L + + S L P + +++ I L ++ + Sbjct: 90 LGYSIYRVLLGFFLAALIAIPFGFVIGMSPLLNKAFDPFIQVLKPISPLAWMPLALFVIR 149 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + ++AIF IF +W M + + ++ D V+++ LS + + + Sbjct: 150 D--------SNISAIFVIFICSIWPMLVNTAYGVASVRNDWLNVAKTHELSKVRTAFTVI 201 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG YI DL ++++A Sbjct: 202 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYYIWNQWNNLDLASVIFA 255 Query: 245 MLTMLGVIFLYD 256 ++ + + FL D Sbjct: 256 IVMIGIIGFLLD 267 >gi|86607538|ref|YP_476300.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556080|gb|ABD01037.1| nitrate ABC transporter, permease protein NrtB [Synechococcus sp. JA-2-3B'a(2-13)] gi|158819610|gb|ABW80922.1| permease protein NrtB [uncultured bacterium] Length = 319 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 10/194 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A ++ + G+ IG + + P Q+L P + P+ + Sbjct: 123 LFWQIWASLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISL 182 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + N ++ W IL N + G P D++ VA ++GW+++ I+ Sbjct: 183 AAFR----DANPSAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIV 238 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P PY TG G +W A + +E+ G G+G +I ++ E++L Sbjct: 239 FPATVPYIFTGLRIGVGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSRISEIILA 292 Query: 559 VLIMCCFVLALNRF 572 ++ + L L+R Sbjct: 293 LIYVGMVGLLLDRI 306 Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 22/254 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINIL--------LHGIQETTVPRDIVDIVPITLDVHSLPQY 64 RRI +L +++ II L Q+T P + L Sbjct: 67 RRILLPATAILLVLILWQIIYSRPGANLPTPLQVWQDTWDPLIKDPFFDYGGNAKGLFWQ 126 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ ++ L V + +R L L PI +++++P L +L ++ F Sbjct: 127 IWASLRRVFIGFALAGLVGVVGGMIIGVNRWLYEALDPIFQVLRTVPPLAWLPISLAAFR 186 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + P +AIF IF + +W + + + IP+D V+R R+SGW+ F+ + Sbjct: 187 DANP--------SAIFVIFITALWPILINTVVGVQQIPQDYRNVARIVRMSGWKYFFKIV 238 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 P ++P + + + + W +VA+EM++ G GIG +I A + I+ A Sbjct: 239 FPATVPYIFTGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSRISEIILA 292 Query: 245 MLTMLGVIFLYDQL 258 ++ + V L D++ Sbjct: 293 LIYVGMVGLLLDRI 306 >gi|121595153|ref|YP_987049.1| nitrate ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|120607233|gb|ABM42973.1| nitrate ABC transporter, inner membrane subunit [Acidovorax sp. JS42] Length = 313 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV V +A+++ IP G IG +S P LL + P+ + Sbjct: 115 VGWNVLASLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLPIGL 174 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 175 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 230 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 231 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVTNILVA 284 Query: 559 VLIMCCFVLALN 570 + ++ L L Sbjct: 285 IFVIGGVGLLLE 296 Score = 146 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 14/205 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L + + L + P++ +++ + L +L ++ Sbjct: 117 WNVLASLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLPIGLLV 176 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 177 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 228 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ IL Sbjct: 229 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVTNIL 282 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267 A+ + GV L + L R ++ Sbjct: 283 VAIFVIGGVGLLLEWALVRLATAFT 307 >gi|317405287|gb|EFV85615.1| nitrate transport system permease [Achromobacter xylosoxidans C54] Length = 280 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 11/216 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 WQ + D I L ++ RV+ ++A+++ IP+G IG + Sbjct: 67 LWQHLRDPFYDRGPNDKGIGIQL-AYSVARVLTGFLLAALVAIPLGFLIGMSRTVYRAFD 125 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + PL + + + ++ + W +L N G A D+ Sbjct: 126 PFIQVLKPISPLAWMPLALYTIKDADTS----AIFVIFICSLWPMLVNTAFGVGAVRQDW 181 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + ++ R +ILP P +TG + G AW + +E+ G TG+ Sbjct: 182 LNVARTLEVSRLRTALLVILPAAAPTIMTGMRISVGIAWLVIVAAEMLIGG------TGI 235 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 G ++ S ++ +L + + L+ L Sbjct: 236 GYFVWNEWNNLSIANIICAILFIGLIGMLLDTVLAR 271 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+L+ +++ L L SR + P + +++ I L ++ + Sbjct: 89 LAYSVARVLTGFLLAALVAIPLGFLIGMSRTVYRAFDPFIQVLKPISPLAWMPLALY--- 145 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + A+ +AIF IF +W M + + + +D V+R+ +S + + Sbjct: 146 -----TIKDADTSAIFVIFICSLWPMLVNTAFGVGAVRQDWLNVARTLEVSRLRTALLVI 200 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM++ G GIG ++ + I+ A Sbjct: 201 LPAAAPTIMTGMRISVGIAWLVIVAAEMLIGGT------GIGYFVWNEWNNLSIANIICA 254 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + + L D +L R Sbjct: 255 ILFIGLIGMLLDTVLAR 271 >gi|226951848|ref|ZP_03822312.1| nitrate ABC transporter, permease protein [Acinetobacter sp. ATCC 27244] gi|226837388|gb|EEH69771.1| nitrate ABC transporter, permease protein [Acinetobacter sp. ATCC 27244] Length = 302 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 16/211 (7%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + I ++ V+ +I+S+I IPVG+ G P+ + P Q+ Sbjct: 82 FSAPPTFIDQILTSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLA 141 Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + P+V V+ +++P LS + + T W L N + G DF V+ Sbjct: 142 WLPIVSLLVASLYVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKV 201 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 +++ + I+LP I P TG + G W I +E+ + + GLG ++ + Sbjct: 202 LNLSWYTHLTKIVLPAIIPMVFTGLRLSVGVGWMVLIAAEMLA------QNPGLGKFVWD 255 Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + G S + + V+ + AL+R + Sbjct: 256 EFQNGSSLSTSRIFVAVITIGLIGFALDRIM 286 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 84/217 (38%), Gaps = 12/217 (5%) Query: 50 DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109 I + + +L+A +IS + L S L P++ I + Sbjct: 77 GSTAIFSAPPTFIDQILTSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKP 136 Query: 110 IPILGFLTFTVVYFMNLYPGKVIG---AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 I L +L + +LY + G + + + + +W + + I +D Sbjct: 137 ISPLAWLPIVSLLVASLYVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFM 196 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 VS+ LS + + +P +P + + +S+ GW ++A+EM+ PG+G Sbjct: 197 NVSKVLNLSWYTHLTKIVLPAIIPMVFTGLRLSVGVGWMVLIAAEMLA------QNPGLG 250 Query: 227 SYIALAIKEQ---DLLAILYAMLTMLGVIFLYDQLLF 260 ++ + I A++T+ + F D+++ Sbjct: 251 KFVWDEFQNGSSLSTSRIFVAVITIGLIGFALDRIML 287 >gi|171914151|ref|ZP_02929621.1| nitrate/nitrite ABC transporter membrane protein [Verrucomicrobium spinosum DSM 4136] Length = 296 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ +++ V +A +I PVG +G ++ P Q+L + PL + Sbjct: 88 ILRFTWLSLKLVAQGYFLALLIGTPVGFLLGLSKKFTTAFDPIIQVLRPVSPLAWLPLGM 147 Query: 439 SCVSYYHL----------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 S + + + W + N G A P D+ VA + Sbjct: 148 ILFSGVKIMDSGGRTTFGASDAAALFTIAICAMWPTVMNTAVGVRAVPQDYLNVAKVLKL 207 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + + +++P PY TG + G AW + E+ + G+G ++ + Sbjct: 208 SRTKTLWKVLVPATLPYMFTGFRLSLGIAWLVIVAVEMLTGR------PGVGGFLWQQYN 261 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 SF ++L +L + L+R + L+ Sbjct: 262 ANSFAHIILCILTIGVVGYVLDRLM-----SLAESKLK 294 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 12/207 (5%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 + ++ + + ++LL L S++ PI+ +++ + L +L Sbjct: 86 QGILRFTWLSLKLVAQGYFLALLIGTPVGFLLGLSKKFTTAFDPIIQVLRPVSPLAWLPL 145 Query: 119 TVVYFMNLYPGKVIG------AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 ++ F + G ++ AA+F I +W + + +P+D V++ Sbjct: 146 GMILFSGVKIMDSGGRTTFGASDAAALFTIAICAMWPTVMNTAVGVRAVPQDYLNVAKVL 205 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 +LS + W + VP ++P + +S+ W +VA EM+ PG+G ++ Sbjct: 206 KLSRTKTLWKVLVPATLPYMFTGFRLSLGIAWLVIVAVEMLTG------RPGVGGFLWQQ 259 Query: 233 IKEQDLLAILYAMLTMLGVIFLYDQLL 259 I+ +LT+ V ++ D+L+ Sbjct: 260 YNANSFAHIILCILTIGVVGYVLDRLM 286 >gi|118582203|gb|ABL07480.1| limonene hydroxylase CD3-2 [Enterobacter cowanii] Length = 306 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 97/267 (36%), Gaps = 13/267 (4%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +PL + R +++ L + + + W++ Sbjct: 32 APLVAKRAPVNRLRSMLQRFITAAIPGLLGAVVLIALWQVAALNSKGFPTPLQTWEAAKT 91 Query: 367 IVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 + Y + + + W ++ RV + +A+++ IPVG IG I+ P Sbjct: 92 LFAEPFYIDGPNDMGIGWNVLASLERVALGFGLAALVGIPVGFLIGRFRFIARMFGPLIA 151 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 LL + P+ + + + W ++ N G P D+ VA Sbjct: 152 LLRPVSPLAWLPIGLLLFQRAEPASTWT----IFICSIWPMILNTAEGVMRIPQDYLNVA 207 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++ + R I+ P + P+ +TG + G AW + +E+ + G G+G +I Sbjct: 208 RVLKLSEFTVMRKILFPAVLPHILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWI 261 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570 + +++ +L++ +AL Sbjct: 262 WNEWNNLNVQNIIIAILLIGVVGMALE 288 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 107/279 (38%), Gaps = 27/279 (9%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-------- 56 N L + R I I LL V++I + + + P + Sbjct: 42 NRLRSMLQRFITAAIPGLLGAVVLIALWQVAALNSKGFPTPLQTWEAAKTLFAEPFYIDG 101 Query: 57 -DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + + + R+ ++ L L + R + + P++ +++ + L + Sbjct: 102 PNDMGIGWNVLASLERVALGFGLAALVGIPVGFLIGRFRFIARMFGPLIALLRPVSPLAW 161 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L ++ F P A+ + IF +W M + + + IP+D V+R +LS Sbjct: 162 LPIGLLLFQRAEP--------ASTWTIFICSIWPMILNTAEGVMRIPQDYLNVARVLKLS 213 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 214 EFTVMRKILFPAVLPHILTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNN 267 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 ++ I+ A+L + V +Q ++ + +F + Sbjct: 268 LNVQNIIIAILLIGVVGMALEQ----GLMAIARRFSYDT 302 >gi|83942159|ref|ZP_00954621.1| putative nitrate transporter [Sulfitobacter sp. EE-36] gi|83847979|gb|EAP85854.1| putative nitrate transporter [Sulfitobacter sp. EE-36] Length = 357 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V Y ++ V+ +IASI+ IP+GI G ++ + P Q+ Sbjct: 135 VRDRAYTGKPTYYDQIWTSIKTVLFGFLIASIVAIPLGIAAGLSVTANAALNPLIQIFKP 194 Query: 428 FPANVFFPLVVSCVSYYHLNPN-------LWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS + + L ++ + + W L N G ++ D Sbjct: 195 VSPLAWLPIVTMIVSAVYSTNDGMFSKSFLISAITVTLCSLWPTLINTSLGVASIDKDLV 254 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + + ++LP P TG + G W I +E+ + + GLG Sbjct: 255 SVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S +++ VL + L+R ++ ++ + Sbjct: 309 KFVWDEFQNGSSQSLARIMVAVLTIGIIGFLLDRVMYALQSMFTFSNNR 357 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY---P 128 +L +I+ + A S L P++ I + + L +L + +Y Sbjct: 157 VLFGFLIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYSTND 216 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VSR +++ + K L +P + Sbjct: 217 GMFSKSFLISAITVTLCSLWPTLINTSLGVASIDKDLVSVSRVLKMNTYTKITKLVLPSA 276 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ A+ Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330 Query: 246 LTMLGVIFLYDQLL 259 LT+ + FL D+++ Sbjct: 331 LTIGIIGFLLDRVM 344 >gi|77456438|ref|YP_345943.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77380441|gb|ABA71954.1| putative ABC sulfur transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 532 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 77/586 (13%), Positives = 179/586 (30%), Gaps = 81/586 (13%) Query: 8 PPFISRRIFP-------NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS 60 PP SRR +P L + + ++ +V I L Sbjct: 14 PPLKSRRTWPSLSHRVLPWILPLGLFALWWLAARNQWMSEQILPAPSLVWNSAIELSQGE 73 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + + R+ ++ + + SRRL ++ P + +P L ++ + Sbjct: 74 LWSHLWISLQRLFWGLLAGVSAGAMLGAALGFSRRLERLIFPTFAGLAQVPTLAWIPLFM 133 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 V+F E + + + V +T + + L E + RL Sbjct: 134 VFFGIG--------ETLKLVVLVKAIVVPVTLHTLVGVRDAQPKLREAAAVLRLPPRLLI 185 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 L +P ++P + + ++++ GW ++A E++ + GIG + A + L Sbjct: 186 RRLVLPAALPAFMAGVRLALAAGWTSLLAVELLASSE------GIGYLMVWARQLFMLDI 239 Query: 241 ILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297 + ++ + + D+ LL + ++ W + E R+ Sbjct: 240 VFVCIVVIGLIGVAMDRGIGLLDKKLVHWPHPATAE---------------IRRGPRYEG 284 Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +L I + + + + + ++ G+A+ Sbjct: 285 WQRVQPWLLPLALFALWQLAVDQQWIDANILVSPWVVLEATKNG----LLDGTLISGMAL 340 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + G ++ + ++ L + Sbjct: 341 SLGRTLGGLLIGGGLGLVLGLLLGLSRTS----------------------------ERV 372 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P L + PL+ + L + + + + + Sbjct: 373 LGPTLAALRQIAIFAWVPLLTAWFGLGELAKWV----FVALAAFFPLFVATQRSVANLSP 428 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 E A ++ + ++LPG P G + AW +I +E Sbjct: 429 QLNEAAQVLRLSLAQRLLRLVLPGAAPGIFAGLRLSLIYAWLGTIGAEYFM-----PSNG 483 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 G+G+ + + + ++ G+L++ LN + L + TR Sbjct: 484 GIGSQMIGAQQLLRMDLIMAGMLLVGLTGALLN-LIGQRLEIRATR 528 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 14/259 (5%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 +R+ P + L F L ++ P +++ L +L + + R Sbjct: 286 QRVQPWLLPLALFALWQLAVDQQWIDANILVSPWVVLEATKNGLLDGTLISGMALSLGRT 345 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L ++I V L SR VL P L ++ I I ++ +F K + Sbjct: 346 LGGLLIGGGLGLVLGLLLGLSRTSERVLGPTLAALRQIAIFAWVPLLTAWFGLGELAKWV 405 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 LAA F +F + +S+ N+ L E ++ RLS Q+ L +P + PG+ Sbjct: 406 FVALAAFFPLFVA--------TQRSVANLSPQLNEAAQVLRLSLAQRLLRLVLPGAAPGI 457 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + +S+ W + +E + + GIGS + A + + I+ ML + Sbjct: 458 FAGLRLSLIYAWLGTIGAEYFMPSN-----GGIGSQMIGAQQLLRMDLIMAGMLLVGLTG 512 Query: 253 FLYDQLLFRPMIVWSNKFR 271 L + L+ + + + + ++R Sbjct: 513 ALLN-LIGQRLEIRATRWR 530 >gi|222111494|ref|YP_002553758.1| nitrate ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|221730938|gb|ACM33758.1| nitrate ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 313 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV V +A+++ IP G IG +S P LL + P+ + Sbjct: 115 VGWNVLASLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLPIGL 174 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 175 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 230 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 231 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVTNILVA 284 Query: 559 VLIMCCFVLALN 570 + ++ L L Sbjct: 285 IFVIGGVGLLLE 296 Score = 146 bits (369), Expect = 1e-32, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 14/205 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L + + L + P++ +++ + L +L ++ Sbjct: 117 WNVLASLQRVAVGFGLAALVGIPAGFVIGRFAFLSRMCNPVISLLRPVSPLAWLPIGLLV 176 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 177 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 228 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ IL Sbjct: 229 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVTNIL 282 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267 A+ + GV L + L R ++ Sbjct: 283 VAIFVIGGVGLLLEWALVRLATAFT 307 >gi|325109807|ref|YP_004270875.1| binding-protein-dependent transporters inner membrane component [Planctomyces brasiliensis DSM 5305] gi|324970075|gb|ADY60853.1| binding-protein-dependent transport systems inner membrane component [Planctomyces brasiliensis DSM 5305] Length = 537 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 86/241 (35%), Gaps = 34/241 (14%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + Y + ++ V +A+ I +P+GI G + + PF L Sbjct: 296 IAASEYAKPWTLPMQIVRSVACVFAGFFLATAIAVPIGILCGVSTTFMAAVTPFIALFKP 355 Query: 428 FPANVFFPLVVSCVSYYHLNPN-----------------------LWLSLLMIFGTQWYI 464 V+ P+ + V +P+ + ++ + + W Sbjct: 356 VSPIVWLPISLIIVGGVITDPDDHWLITTLAELPLIGWLQINPAFIASAITVALCSLWPT 415 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 L N G ++ D VA ++ ++ I++P P G + G W I + Sbjct: 416 LVNTALGVASIDKDHLNVARVLRLSFFQRLTKIVIPSALPLIFAGLRISLGVGWMVLIAA 475 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGS---FPEVVLGVLIMCCFVLALNR--FLWHPLYL 579 E+ S + G+G ++ + GS F ++ + V ++ L L+R ++ L Sbjct: 476 ELLS------SSEGIGKFVWDMFNNGSSATFAQMFVVVFVVGAIGLLLDRIMIVFQRLVS 529 Query: 580 Y 580 + Sbjct: 530 F 530 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 87/233 (37%), Gaps = 30/233 (12%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 +LP R+ + + ++ L S + P + + + + + +L Sbjct: 304 PWTLPMQIVRSVACVFAGFFLATAIAVPIGILCGVSTTFMAAVTPFIALFKPVSPIVWLP 363 Query: 118 FTVVYFMNLYPGK-------------------VIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +++ + + A +A+ + +W + + Sbjct: 364 ISLIIVGGVITDPDDHWLITTLAELPLIGWLQINPAFIASAITVALCSLWPTLVNTALGV 423 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +I +D V+R RLS +Q+ + +P ++P + + +S+ GW ++A+E++ + Sbjct: 424 ASIDKDHLNVARVLRLSFFQRLTKIVIPSALPLIFAGLRISLGVGWMVLIAAELLSSSE- 482 Query: 219 VIPLPGIGSYIALAIKEQD---LLAILYAMLTMLGVIFLYDQLL--FRPMIVW 266 GIG ++ + + + + L D+++ F+ ++ + Sbjct: 483 -----GIGKFVWDMFNNGSSATFAQMFVVVFVVGAIGLLLDRIMIVFQRLVSF 530 >gi|220909929|ref|YP_002485240.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866540|gb|ACL46879.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 280 Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV V ++A+++ I +GI IG I + Q+L P + PL + Sbjct: 83 LFWHLLASLQRVAVGFLLAAVVGIGLGILIGTNALIYDALDFVFQVLRTVPPLAWLPLSL 142 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ W I+ N G P D++ VA ++ ++ I+ Sbjct: 143 AMFR----DNQPSAIFVIFITAIWPIIINTAVGVQQVPQDYRNVAKVLKLSRVEYFLNIL 198 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + +E+ G G+G +I ++ E++L Sbjct: 199 LPSTVPYVFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISEIILA 252 Query: 559 VLIMCCFVLALNRFL 573 ++ + L++ + Sbjct: 253 LIYVGIVGFILDKLV 267 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 92/201 (45%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ +++ + L + + L + +++++P L +L Sbjct: 81 KGLFWHLLASLQRVAVGFLLAAVVGIGLGILIGTNALIYDALDFVFQVLRTVPPLAWLPL 140 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F + P +AIF IF + +W + + + +P+D V++ +LS + Sbjct: 141 SLAMFRDNQP--------SAIFVIFITAIWPIIINTAVGVQQVPQDYRNVAKVLKLSRVE 192 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P + + + + W +VA+EM++ G GIG +I A + Sbjct: 193 YFLNILLPSTVPYVFTGLRIGIGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLI 246 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V F+ D+L+ Sbjct: 247 SEIILALIYVGIVGFILDKLV 267 >gi|148256707|ref|YP_001241292.1| putative nitrate ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146408880|gb|ABQ37386.1| putative nitrate ABC transporter (permease protein) (ntrB-like protein) [Bradyrhizobium sp. BTAi1] Length = 279 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ + D I L ++ RV++ +IA I IP+G IG P +S Sbjct: 62 VGAKLWEHLKRPFYDNGPNDKGLGIQL-AFSLGRVMLGYLIAVAIAIPLGFLIGMSPLMS 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q++ + PL + + + +L ++ + W +L N G ++ Sbjct: 121 KALDPFIQIMKPISPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLINTAFGVASV 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V++ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSITNVIIAILLIGVVGMVLDQILAR 270 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 97/236 (41%), Gaps = 23/236 (9%) Query: 35 LLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRMLSAMVISLLFTFV 85 G P D+ + L + L + + R++ +I++ Sbjct: 49 ATQGKSAMPGPLDVGAKLWEHLKRPFYDNGPNDKGLGIQLAFSLGRVMLGYLIAVAIAIP 108 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L S + L P + IM+ I L ++ + + + L+AIF IF Sbjct: 109 LGFLIGMSPLMSKALDPFIQIMKPISPLAWMPLALY--------TIKDSSLSAIFVIFIC 160 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 VW M + + ++ ++ V+R+ + ++ + + +P + P ++ M +S+ W Sbjct: 161 SVWPMLINTAFGVASVRKEWINVARTLEVGNVRRAFTVILPAAAPTILTGMRISIGIAWL 220 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 +VA+EM+V G GIG ++ + ++ A+L + V + DQ+L R Sbjct: 221 VIVAAEMLVGGT------GIGYFVWNEWNNLSITNVIIAILLIGVVGMVLDQILAR 270 >gi|110681288|ref|YP_684295.1| nitrate ABC transporter, permease component [Roseobacter denitrificans OCh 114] gi|109457404|gb|ABG33609.1| nitrate ABC transporter, permease component [Roseobacter denitrificans OCh 114] Length = 357 Score = 154 bits (390), Expect = 4e-35, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 86/229 (37%), Gaps = 18/229 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V + Y ++ V +IASI+ IP+GI G ++ + P Q+ Sbjct: 135 VRNRIYTGKPTYYDQIWTSIKTVFFGFMIASIVAIPLGIAAGLSVTANAALNPLIQIFKP 194 Query: 428 FPANVFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P+V VS + + W ++ + + W L N G S+ D Sbjct: 195 VSPLAWLPIVTMIVSAVYTTNDGWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLV 254 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + + ++LP P TG + G W I +E+ + + GLG Sbjct: 255 SVSRVLKMNTYTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLG 308 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFLW--HPLYLYGTRC 584 ++ + + G S +++ V + L+R ++ ++ + Sbjct: 309 KFVWDEFQNGSSQSLARIMVAVFTIGIIGFLLDRVMYALQSMFTFSNNR 357 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP--- 128 + +I+ + A S L P++ I + + L +L + +Y Sbjct: 157 VFFGFMIASIVAIPLGIAAGLSVTANAALNPLIQIFKPVSPLAWLPIVTMIVSAVYTTND 216 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G + L + + +W + + +I +DL VSR +++ + K L +P + Sbjct: 217 GWFEKSFLVSAITVTLCSLWPTLINTALGVSSIDKDLVSVSRVLKMNTYTKITKLVLPSA 276 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE---QDLLAILYAM 245 +P + + +S+ GW ++A+EM+ PG+G ++ + Q L I+ A+ Sbjct: 277 LPLIFTGLRLSLGVGWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSQSLARIMVAV 330 Query: 246 LTMLGVIFLYDQLL 259 T+ + FL D+++ Sbjct: 331 FTIGIIGFLLDRVM 344 >gi|221069138|ref|ZP_03545243.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|220714161|gb|EED69529.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] Length = 330 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV + +A+++ IP+G IG +S P LL + P+ + Sbjct: 132 VGWNVLSSLQRVALGFGLAALVGIPLGFVIGRFSFLSRMFNPLISLLRPVSPLAWLPIGL 191 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 192 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 247 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 248 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 301 Query: 559 VLIMCCFVLALN 570 + ++ L L Sbjct: 302 IFVIGIVGLVLE 313 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 86/213 (40%), Gaps = 18/213 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L + + L + P++ +++ + L +L ++ Sbjct: 134 WNVLSSLQRVALGFGLAALVGIPLGFVIGRFSFLSRMFNPLISLLRPVSPLAWLPIGLLV 193 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 194 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 245 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 246 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 299 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275 A+ + V + + ++ ++ F E Sbjct: 300 IAIFVIGIVGLVLEWA----LVKLASAFTFEEV 328 >gi|170077483|ref|YP_001734121.1| sulfonate/nitrate transport system permease protein [Synechococcus sp. PCC 7002] gi|169885152|gb|ACA98865.1| sulfonate/nitrate transport system permease protein [Synechococcus sp. PCC 7002] Length = 278 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 49/231 (21%), Positives = 90/231 (38%), Gaps = 12/231 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +S + I + + W D L + W I++ RV + + AS Sbjct: 45 ISARIGILANMPTASLTLKELWWWTTNPFFDNGPND-LGIGWNLLISLRRVAIGYLAASC 103 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +P+GI IG P PF QLL + PL + + + ++ Sbjct: 104 VAVPLGILIGISPIARKGFNPFIQLLKPVSPLAWLPLGLYVLR----DSEQTGVFIIFIS 159 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + W L N G + ++ +VA + + +R +I+P P ++G + G AW Sbjct: 160 SIWPTLINTSFGVANVSKEYLDVAKTLGASSFRTIFKVIIPAALPNILSGLRISMGIAWL 219 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ TGLG +I P +++ +LI+ L L+ Sbjct: 220 VIVAAEMLLG-------TGLGYFIWNEWNNLYIPNILVAILIIGLVGLILD 263 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 98/254 (38%), Gaps = 33/254 (12%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA--------------- 65 + LAF L + + + L G + + + ++ +L + L + Sbjct: 25 NFLAFALFVASLIVFLGGWEISARIGILANMPTASLTLKELWWWTTNPFFDNGPNDLGIG 84 Query: 66 ---SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ + + L S P + +++ + L +L + Sbjct: 85 WNLLISLRRVAIGYLAASCVAVPLGILIGISPIARKGFNPFIQLLKPVSPLAWLPLGLYV 144 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + +E +F IF S +W + + N+ ++ +V+++ S ++ + Sbjct: 145 LRD--------SEQTGVFIIFISSIWPTLINTSFGVANVSKEYLDVAKTLGASSFRTIFK 196 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P ++ + +SM W +VA+EM++ G+G +I + IL Sbjct: 197 VIIPAALPNILSGLRISMGIAWLVIVAAEMLLG-------TGLGYFIWNEWNNLYIPNIL 249 Query: 243 YAMLTMLGVIFLYD 256 A+L + V + D Sbjct: 250 VAILIIGLVGLILD 263 >gi|294649103|ref|ZP_06726545.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] gi|292824986|gb|EFF83747.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] Length = 302 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 16/211 (7%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + I ++ V+ +I+S+I IPVG+ G P+ + P Q+ Sbjct: 82 FSAPPTFIDQILTSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKPISPLA 141 Query: 433 FFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + P+V V+ +++P LS + + T W L N + G DF V+ Sbjct: 142 WLPIVSLLVASLYVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFMNVSKV 201 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 +++ + I+LP I P TG + G W I +E+ + + GLG ++ + Sbjct: 202 LNLSWYTHLTKIVLPAIIPMLFTGLRLSVGVGWMVLIAAEMLA------QNPGLGKFVWD 255 Query: 546 STEKG---SFPEVVLGVLIMCCFVLALNRFL 573 + G S + + V+ + AL+R + Sbjct: 256 EFQNGSSLSTSRIFVAVITIGLIGFALDRIM 286 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 12/217 (5%) Query: 50 DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109 I + + +L+A +IS + L S L P++ I + Sbjct: 77 GSTAIFSAPPTFIDQILTSLKTVLTACLISSMIAIPVGLLCGLSPNFYRALNPLIQIFKP 136 Query: 110 IPILGFLTFTVVYFMNLYPGKVIG---AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 I L +L + +LY + G + + + + +W + + I +D Sbjct: 137 ISPLAWLPIVSLLVASLYVHPIEGLSKSFVISAITVAMCTIWPTLINTMVGVGQISQDFM 196 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 VS+ LS + + +P +P L + +S+ GW ++A+EM+ PG+G Sbjct: 197 NVSKVLNLSWYTHLTKIVLPAIIPMLFTGLRLSVGVGWMVLIAAEMLA------QNPGLG 250 Query: 227 SYIALAIKEQ---DLLAILYAMLTMLGVIFLYDQLLF 260 ++ + I A++T+ + F D+++ Sbjct: 251 KFVWDEFQNGSSLSTSRIFVAVITIGLIGFALDRIML 287 >gi|37521137|ref|NP_924514.1| nitrate/nitrite transport system permease protein [Gloeobacter violaceus PCC 7421] gi|35212133|dbj|BAC89509.1| nitrate/nitrite transport system permease protein [Gloeobacter violaceus PCC 7421] Length = 281 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 10/196 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+++ + VGI +G + P Q+L P + P+ + Sbjct: 86 IAWQLAASLQRVAIGYTLAAVVGVSVGILMGSMRSFQLALDPIFQVLRTIPPLAWLPIAL 145 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + +S N ++ W I+ N G + P D++ VAS ++ ++ I+ Sbjct: 146 AALS----QANPSAIFVIFITAVWPIIINTAVGVRSTPQDYRNVASVLKLSKPTYFFQIL 201 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP Y TG A G AW A + +E+ + G G+G +I +S +++L Sbjct: 202 LPSAASYIFTGLRIAVGLAWLAIVAAEMLTGG------VGIGFFIWDSYNSSRMADIILA 255 Query: 559 VLIMCCFVLALNRFLW 574 VL + L+R ++ Sbjct: 256 VLCVGLVGFVLDRMIY 271 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 86/200 (43%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + + R+ ++ + L R + L PI ++++IP L +L Sbjct: 85 GIAWQLAASLQRVAIGYTLAAVVGVSVGILMGSMRSFQLALDPIFQVLRTIPPLAWLPIA 144 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + P +AIF IF + VW + + + + P+D V+ +LS Sbjct: 145 LAALSQANP--------SAIFVIFITAVWPIIINTAVGVRSTPQDYRNVASVLKLSKPTY 196 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F+ + +P + + + +++ W +VA+EM+ G GIG +I + + Sbjct: 197 FFQILLPSAASYIFTGLRIAVGLAWLAIVAAEMLTGGV------GIGFFIWDSYNSSRMA 250 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+L + V F+ D+++ Sbjct: 251 DIILAVLCVGLVGFVLDRMI 270 >gi|261856785|ref|YP_003264068.1| nitrate ABC transporter inner membrane subunit [Halothiobacillus neapolitanus c2] gi|261837254|gb|ACX97021.1| nitrate ABC transporter, inner membrane subunit [Halothiobacillus neapolitanus c2] Length = 280 Score = 154 bits (389), Expect = 5e-35, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++A I+ IP+G IG P + + P+ QLL + PL + + Sbjct: 92 SLGRVLAGFLLAVIVAIPLGFLIGMSPLVFKALNPYIQLLKPISPLAWMPLALYTIK--- 148 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + N ++ + W ++ N G ++ D+ VA + +T + +ILP P Sbjct: 149 -DANASSIFVIFICSIWPMMINTAHGVASVRKDWLNVAKTLEVTPLKTAITVILPAAAPT 207 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG + G AW + +E+ G TG+G ++ + V+ + ++ Sbjct: 208 ILTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNEWNNLNLANVIFAIFMIGVV 261 Query: 566 VLALNRFL 573 + L+ Sbjct: 262 GMLLDAIF 269 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 87/195 (44%), Gaps = 14/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 S + R+L+ +++++ L S + L P + +++ I L ++ + Sbjct: 89 LSWSLGRVLAGFLLAVIVAIPLGFLIGMSPLVFKALNPYIQLLKPISPLAWMPLALY--- 145 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + A ++IF IF +W M + + ++ +D V+++ ++ + + Sbjct: 146 -----TIKDANASSIFVIFICSIWPMMINTAHGVASVRKDWLNVAKTLEVTPLKTAITVI 200 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA+EM+V G GIG ++ +L +++A Sbjct: 201 LPAAAPTILTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLNLANVIFA 254 Query: 245 MLTMLGVIFLYDQLL 259 + + V L D + Sbjct: 255 IFMIGVVGMLLDAIF 269 >gi|291617213|ref|YP_003519955.1| NrtB [Pantoea ananatis LMG 20103] gi|291152243|gb|ADD76827.1| NrtB [Pantoea ananatis LMG 20103] Length = 312 Score = 153 bits (388), Expect = 6e-35, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 83/244 (34%), Gaps = 13/244 (5%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY---Q 374 R +R LC + + I W + + Y Sbjct: 53 RPPARLRPLLQRCIPALCGVLLLLLVWQIAALYSQGFPGPYATWAAAKVLFADPFYNNGP 112 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + + W ++ RV + +A+++ IP G +G ++ P LL + Sbjct: 113 NDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWL 172 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 173 PIGLLLFQRAEPASSWT----IFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTIM 228 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 229 RRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVEN 282 Query: 555 VVLG 558 +++ Sbjct: 283 ILIA 286 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 14/188 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R+ ++ L L + + + PI+ +++ + L +L Sbjct: 113 NDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWL 172 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P A+ + IF +W M + + + IP+D V+R +LS Sbjct: 173 PIGLLLFQRAEP--------ASSWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSE 224 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W + P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 225 WTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNL 278 Query: 237 DLLAILYA 244 ++ IL A Sbjct: 279 NVENILIA 286 >gi|254458247|ref|ZP_05071673.1| nitrate ABC transporter, inner membrane subunit [Campylobacterales bacterium GD 1] gi|207085083|gb|EDZ62369.1| nitrate ABC transporter, inner membrane subunit [Campylobacterales bacterium GD 1] Length = 289 Score = 153 bits (388), Expect = 6e-35, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 10/181 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 QD + W ++ RV ++A ++ +P+G+++G + PF Q+ + Sbjct: 85 QDDKGIFWQIIASLKRVFAGFVLAILVGVPIGLFVGMSKSAQYALNPFIQIFKPVSPLAW 144 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL++ + N+ + + W I+ N G + D+ VA + Sbjct: 145 LPLLLFIFQ----DINMTAISTIFITSIWPIIINTALGVKSVSEDYMNVAKVLRFSPLEK 200 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 IILP PY TG + G AW + +E+ + G G+G +I + ++ Sbjct: 201 IVQIILPVSVPYIFTGMRLSLGIAWLVIVAAEMLTGG------IGIGFWIWDEYNNLNYH 254 Query: 554 E 554 Sbjct: 255 N 255 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D + + R+ + V+++L S+ L P + I + + L +L Sbjct: 86 DDKGIFWQIIASLKRVFAGFVLAILVGVPIGLFVGMSKSAQYALNPFIQIFKPVSPLAWL 145 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + F + + AI IF + +W + + + ++ D V++ R S Sbjct: 146 PLLLFIFQD--------INMTAISTIFITSIWPIIINTALGVKSVSEDYMNVAKVLRFSP 197 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 +K + +P S+P + M +S+ W +VA+EM+ G GIG +I Sbjct: 198 LEKIVQIILPVSVPYIFTGMRLSLGIAWLVIVAAEMLTGGI------GIGFWIWDEYNNL 251 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 + I+ ++ + + + D ++ R Sbjct: 252 NYHNIIIGIIVVGLIGYFLDLIMGR 276 >gi|74318291|ref|YP_316031.1| nitrate transport permease [Thiobacillus denitrificans ATCC 25259] gi|74057786|gb|AAZ98226.1| nitrate transport permease [Thiobacillus denitrificans ATCC 25259] Length = 299 Score = 153 bits (388), Expect = 7e-35, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 88/214 (41%), Gaps = 13/214 (6%) Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 W++ + Y + + W +++RV V A+ + IP+G IG ++ Sbjct: 83 TWEAARALFADPFYDNGPNDQGIGWNVLNSLYRVGVGFGAAAAVGIPLGFMIGRFDFLNR 142 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + P +L + P+ + + ++ + W ++ N AG P Sbjct: 143 MLAPIIGILRPVSPLAWLPIGLLVLQ----KAEPASIWVIFISSIWPMVLNTAAGVQRVP 198 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D+ VA ++ +R + I+ P + P+ +TG + G AW + +E+ + G Sbjct: 199 QDYMNVARVLKLSEFRVFTRILFPAVLPHVLTGVRLSIGVAWLVIVAAEMLTGG------ 252 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G+G ++ + + +++ + I+ LAL Sbjct: 253 VGIGFWVWDEWNNLNVAHIIIAIFIVGLVGLALE 286 Score = 146 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 104/271 (38%), Gaps = 24/271 (8%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLP 62 + + P + LL F + ++ + T + + + + Sbjct: 47 ATLVKNAIPPLLGLLLFTALWALVANSGQTLPGPTETWEAARALFADPFYDNGPNDQGIG 106 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ + + + L +L PI+ I++ + L +L ++ Sbjct: 107 WNVLNSLYRVGVGFGAAAAVGIPLGFMIGRFDFLNRMLAPIIGILRPVSPLAWLPIGLLV 166 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 P A+I+ IF S +W M + + +P+D V+R +LS ++ F Sbjct: 167 LQKAEP--------ASIWVIFISSIWPMVLNTAAGVQRVPQDYMNVARVLKLSEFRVFTR 218 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +S+ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 219 ILFPAVLPHVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVAHII 272 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 A+ + V +Q ++V + +F E Sbjct: 273 IAIFIVGLVGLALEQ----GLMVLAKRFSYE 299 >gi|223937679|ref|ZP_03629581.1| nitrate ABC transporter, inner membrane subunit [bacterium Ellin514] gi|223893651|gb|EEF60110.1| nitrate ABC transporter, inner membrane subunit [bacterium Ellin514] Length = 261 Score = 153 bits (387), Expect = 7e-35, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 79/209 (37%), Gaps = 12/209 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL-V 437 ++ ++ V ++A + P+G +G + P Q+L + PL + Sbjct: 62 ILRFTWYSLVLVAKGYVLALALGTPIGFCLGLSKTFTKIFDPIIQVLRPVSPLAWLPLGL 121 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + +S+ L + W + N G A P D+ VA ++ + + Sbjct: 122 ILFLSFGKQASELGALFTIAICAMWPTVMNTAVGVRAIPQDYLNVARVLKLSRSKTLFKV 181 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ++P PY TG + G AW + +E+ + G+G ++ + + ++L Sbjct: 182 LIPATLPYMFTGFRLSLGIAWLVIVAAEMLTGR------PGVGGFLWQEYNALIYEHIIL 235 Query: 558 GVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 ++++ L+R + + + Sbjct: 236 CIIVIGLVGFVLDRLM-----SLAEKRFK 259 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 102/256 (39%), Gaps = 24/256 (9%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-------PITLDV--------HSLPQ 63 D L L+ I + I T +++ + P ++ + + Sbjct: 5 KLDWLILPLIGAACVIAIWAISSATWAKELPSPLKTWQSSKPYIMEPFAKRGEMDQGILR 64 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + + + V++L S+ + PI+ +++ + L +L ++ F Sbjct: 65 FTWYSLVLVAKGYVLALALGTPIGFCLGLSKTFTKIFDPIIQVLRPVSPLAWLPLGLILF 124 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 ++ +EL A+F I +W + + IP+D V+R +LS + + + Sbjct: 125 LSFG---KQASELGALFTIAICAMWPTVMNTAVGVRAIPQDYLNVARVLKLSRSKTLFKV 181 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P + +S+ W +VA+EM+ PG+G ++ I+ Sbjct: 182 LIPATLPYMFTGFRLSLGIAWLVIVAAEMLTG------RPGVGGFLWQEYNALIYEHIIL 235 Query: 244 AMLTMLGVIFLYDQLL 259 ++ + V F+ D+L+ Sbjct: 236 CIIVIGLVGFVLDRLM 251 >gi|91776523|ref|YP_546279.1| nitrate transport permease [Methylobacillus flagellatus KT] gi|91710510|gb|ABE50438.1| nitrate transport permease [Methylobacillus flagellatus KT] Length = 272 Score = 153 bits (387), Expect = 8e-35, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV V +A+++ IP G IG P + PF Q+L + P+ + + Sbjct: 84 SLGRVAVGFSMAALVAIPFGFLIGMSPLAFKVLDPFIQILKPISPLAWMPIALYTIKDST 143 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ + W +L N G + ++ VA + + R +ILP P Sbjct: 144 ASG----IFVIFICSLWPMLMNTAFGVANVRKEWLNVARTLEVGQLRKAFCVILPAAAPT 199 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 VTG + G AW + +E+ G TG+G ++ S V+ +L++ Sbjct: 200 IVTGMRISMGIAWLVIVAAEMLVGG------TGIGYFVWNQWNNLSLANVIFAILMIGVV 253 Query: 566 VLALN 570 + L+ Sbjct: 254 GMVLD 258 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 14/191 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + + R+ ++ L + L S VL P + I++ I L ++ + Sbjct: 82 AHSLGRVAVGFSMAALVAIPFGFLIGMSPLAFKVLDPFIQILKPISPLAWMPIALY---- 137 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 + + + IF IF +W M + + N+ ++ V+R+ + +K + + + Sbjct: 138 ----TIKDSTASGIFVIFICSLWPMLMNTAFGVANVRKEWLNVARTLEVGQLRKAFCVIL 193 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P +V M +SM W +VA+EM+V G GIG ++ L +++A+ Sbjct: 194 PAAAPTIVTGMRISMGIAWLVIVAAEMLVGGT------GIGYFVWNQWNNLSLANVIFAI 247 Query: 246 LTMLGVIFLYD 256 L + V + D Sbjct: 248 LMIGVVGMVLD 258 >gi|94309221|ref|YP_582431.1| nitrate transport permease [Cupriavidus metallidurans CH34] gi|93353073|gb|ABF07162.1| ABC-type transporter, permease component: NitT family [Cupriavidus metallidurans CH34] Length = 303 Score = 153 bits (387), Expect = 8e-35, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 85/212 (40%), Gaps = 13/212 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 G W + + Y + + W ++ RV +A+++ IP G +G + Sbjct: 83 GATWNAAVPLFADPFYRNGPNDQGIGWNVLASLARVAAGFGLAAVVGIPAGFLLGRFAFL 142 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ P LL + P+ + N + + W ++ N G + Sbjct: 143 NAMASPVISLLRPVSPLAWLPIGLLLFKAA----NPAAIWAIFICSIWPMIINTAVGVTR 198 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ W+ +R+++ P + PY +TG + G AW + +E+ + G Sbjct: 199 VPQDYLNVARVLDLSEWKIFRHVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG---- 254 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 TG+G ++ + +V+ + I+ Sbjct: 255 --TGIGFWLWDEWNNLKVEHIVIAIFIIGVVG 284 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 94/242 (38%), Gaps = 20/242 (8%) Query: 17 PNIFDLLAFVLVIGIINILLH------GIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 P + FVLV I L+ VP + + + Sbjct: 57 PPLIGFALFVLVWHGIATLIPSIPTPGATWNAAVPLFADPFYRNGPNDQGIGWNVLASLA 116 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + ++ + L + L + P++ +++ + L +L ++ F P Sbjct: 117 RVAAGFGLAAVVGIPAGFLLGRFAFLNAMASPVISLLRPVSPLAWLPIGLLLFKAANP-- 174 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AAI+AIF +W M + + +P+D V+R LS W+ F ++ P +P Sbjct: 175 ------AAIWAIFICSIWPMIINTAVGVTRVPQDYLNVARVLDLSEWKIFRHVLFPAVLP 228 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ + Sbjct: 229 YMLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFIIGV 282 Query: 251 VI 252 V Sbjct: 283 VG 284 >gi|188583848|ref|YP_001927293.1| nitrate ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179347346|gb|ACB82758.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium populi BJ001] Length = 279 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W + D I L ++ RV + +A ++ IPVG IG P +S Sbjct: 62 VGATIWHHLKDPFYDRGPNDKGIGIQL-AYSIGRVALGYGLAVLVAIPVGFLIGMSPLMS 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P+ Q+L + PL + + + +L ++ + W +L N + G + Sbjct: 121 RALDPYIQILKPVSPLAWMPLALYTIK----DSSLSAIFVIFICSVWPMLINTVFGVAGT 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 177 RKEWLNVARTLEVGPVRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V+ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 14/197 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+ +++L L S + L P + I++ + L ++ + Sbjct: 88 LAYSIGRVALGYGLAVLVAIPVGFLIGMSPLMSRALDPYIQILKPVSPLAWMPLALY--- 144 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + + L+AIF IF VW M + + ++ V+R+ + ++ + + Sbjct: 145 -----TIKDSSLSAIFVIFICSVWPMLINTVFGVAGTRKEWLNVARTLEVGPVRRAFTVI 199 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +S+ W +VA+EM+V G GIG ++ + ++ + Sbjct: 200 LPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNLSITNVITS 253 Query: 245 MLTMLGVIFLYDQLLFR 261 +L + V + DQLL R Sbjct: 254 ILVIGLVGMVLDQLLAR 270 >gi|121604319|ref|YP_981648.1| nitrate ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593288|gb|ABM36727.1| nitrate ABC transporter, inner membrane subunit [Polaromonas naphthalenivorans CJ2] Length = 311 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 101/265 (38%), Gaps = 18/265 (6%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 +T + F +L++ +L + W V G I ++ + D Sbjct: 43 PKTAARPQRDFSALWLRVLPPLLGLALLVLVWELVSLGTKASIPSPKDTFLQAVVLFSDP 102 Query: 377 LY--------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 Y V W ++ RV + +A+I+ IPVG IG +S+ P L+ Sbjct: 103 FYSNGPNDQGVGWNVLSSLKRVAMGFGLAAIVGIPVGFMIGRFSFLSNMFNPLISLMRPV 162 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 + P+ + + + + W ++ N G P D+ VA ++ Sbjct: 163 SPLAWLPIGLLVFK----GADPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNL 218 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + W+ I+ P + PY +TG A G AW + +E+ + G G+G ++ + Sbjct: 219 SEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWN 272 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 + +++ + ++ L L L Sbjct: 273 NLNVKNIIIAIFVIGIVGLMLEYAL 297 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 85/215 (39%), Gaps = 18/215 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ + + + L + P++ +M+ + L +L ++ Sbjct: 115 WNVLSSLKRVAMGFGLAAIVGIPVGFMIGRFSFLSNMFNPLISLMRPVSPLAWLPIGLLV 174 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 175 FKGADP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTK 226 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 227 ILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 280 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 A+ + V + + +I + F E Sbjct: 281 IAIFVIGIVGLMLEYA----LIKLATAFTFEEVKS 311 >gi|196052748|gb|ACG69439.1| ABC transporter inner membrane subunit protein [Pseudomonas pseudoalcaligenes] Length = 280 Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 12/190 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+ ++A+++ IPV IG P + + PF Q+L + PL + + Sbjct: 90 SLYRVLTGYLLAALVAIPVSFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIKDSQ 149 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG--IF 503 + ++ + W +L N G + D+ VA + ++ R +ILP Sbjct: 150 TS----AIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVILPARRAM 205 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG + G AW + E+ G TG+G Y+ + V+ +L++ Sbjct: 206 PTILTGMRISVGIAWLVIVAPEMLVGG------TGIGYYVWNEWNNLNLASVIFSILMIG 259 Query: 564 CFVLALNRFL 573 + L+ L Sbjct: 260 VVGMLLDLLL 269 Score = 138 bits (347), Expect = 4e-30, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 16/197 (8%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+L+ +++ L + + S + L P + I++ I L ++ + Sbjct: 87 LAHSLYRVLTGYLLAALVAIPVSFVIGMSPLMYRALNPFIQILRPISPLAWMPLALFVIK 146 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + ++ +AIF IF VW M + + + RD V+R+ LS + + + Sbjct: 147 D--------SQTSAIFVIFICSVWPMLLNTAFGVAGVRRDWINVARTHELSPLRTAFSVI 198 Query: 185 VPF--SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 +P +MP ++ M +S+ W +VA EM+V G GIG Y+ +L +++ Sbjct: 199 LPARRAMPTILTGMRISVGIAWLVIVAPEMLVGGT------GIGYYVWNEWNNLNLASVI 252 Query: 243 YAMLTMLGVIFLYDQLL 259 +++L + V L D LL Sbjct: 253 FSILMIGVVGMLLDLLL 269 >gi|124266584|ref|YP_001020588.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1] gi|124259359|gb|ABM94353.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1] Length = 305 Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 17/269 (6%) Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYI 367 K L F + L++ + +L W + W + Sbjct: 36 PSAKPAARLPAEPFDWRGLALRVLPPIFGAGLLIGIWALLTMNGGAFPTPAATWAEFAKL 95 Query: 368 VNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + Y + + W ++ RV + +A+++ IP G +G ++ I P L Sbjct: 96 FSDPFYDNGPNDQGIGWNVLFSLERVALGFGLAALVGIPAGFVLGRFSFVNHMISPLISL 155 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ + N + + W ++ N G P D+ VA Sbjct: 156 LRPVSPLAWLPIGLLVFKAA----NPAAIWTIFICSIWPMIINTAVGVQRVPQDYLNVAR 211 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +++ W+ I+ P + PY +TG + G AW + +E+ + G G+G ++ Sbjct: 212 VLNLSEWKVMTRILFPAVLPYMLTGVRLSVGTAWLVIVAAEMLTGG------VGIGFWVW 265 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + +++ + ++ L L + L Sbjct: 266 DEWNNLNVAHILIAIFVIGIVGLLLEQAL 294 Score = 146 bits (369), Expect = 9e-33, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 102/257 (39%), Gaps = 24/257 (9%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLP 62 ++ R+ P IF + + ++ + +G T + + D + Sbjct: 54 LALRVLPPIFGAGLLIGIWALLTM--NGGAFPTPAATWAEFAKLFSDPFYDNGPNDQGIG 111 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L + + + ++ P++ +++ + L +L ++ Sbjct: 112 WNVLFSLERVALGFGLAALVGIPAGFVLGRFSFVNHMISPLISLLRPVSPLAWLPIGLLV 171 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 172 FKAANP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYLNVARVLNLSEWKVMTR 223 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +S+ W +VA+EM+ G GIG ++ ++ IL Sbjct: 224 ILFPAVLPYMLTGVRLSVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVAHIL 277 Query: 243 YAMLTMLGVIFLYDQLL 259 A+ + V L +Q L Sbjct: 278 IAIFVIGIVGLLLEQAL 294 >gi|330718294|ref|ZP_08312894.1| OpuABC protein [Leuconostoc fallax KCTC 3537] Length = 569 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ A VISL+ LAAKS R ++ PILD MQ++P +L Sbjct: 86 QGLWEDLMNTLTLVVMASVISLIIGVPLGILAAKSDRARAIIQPILDFMQTMPGFVYLIP 145 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA + M + +P DL E + SF + WQ Sbjct: 146 AVAFFG---IGVVPGVFASIIFA-----LPPMVRMTNLGIRQVPTDLVEAADSFGSTPWQ 197 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K L +P + ++ ++ VV + MI PG+G + A++ D+ Sbjct: 198 KLIKLELPTAKNTILAGANQTIMLALSMVVTASMI-------GAPGLGRGVLAAVQHADV 250 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + L ++ + + D+ Sbjct: 251 GSGFVNGLGLVILAIIIDRF 270 Score = 94.2 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 18/213 (8%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 A+ + + N ++D++ T+ VV+ +I+ II +P+GI + IQ Sbjct: 76 AFFGLVLVANQGLWEDLMN-------TLTLVVMASVISLIIGVPLGILAAKSDRARAIIQ 128 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P + P V+ V+ + + ++ G P D Sbjct: 129 PILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASIIF----ALPPMVRMTNLGIRQVPTDL 184 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 E A SF T W+ + LP + GA A + + + + GL Sbjct: 185 VEAADSFGSTPWQKLIKLELPTAKNTILAGANQTIMLALSMVVTASMIG-------APGL 237 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 G + + + + L + + ++RF Sbjct: 238 GRGVLAAVQHADVGSGFVNGLGLVILAIIIDRF 270 >gi|157145548|ref|YP_001452867.1| hypothetical protein CKO_01291 [Citrobacter koseri ATCC BAA-895] gi|157082753|gb|ABV12431.1| hypothetical protein CKO_01291 [Citrobacter koseri ATCC BAA-895] Length = 293 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV + +A+++ IP+G IG S P LL + Sbjct: 92 PNDMGIGWNVLASLQRVAIGFGLAALVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAW 151 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA + W Sbjct: 152 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLPEWTV 207 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 208 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVE 261 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++ ++I+ L L + L Sbjct: 262 NILIAIVIIGVVGLLLEQGL 281 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 18/213 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L L + + P++ +++ + L +L Sbjct: 96 GIGWNVLASLQRVAIGFGLAALVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAWLPIG 155 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P A+ + IF +W M + + + IP+D V+R +L W Sbjct: 156 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLPEWTV 207 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + P +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 208 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVE 261 Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269 IL A++ + V L +Q L+ R W K Sbjct: 262 NILIAIVIIGVVGLLLEQGLMLVARRF-SWQEK 293 >gi|87302043|ref|ZP_01084877.1| permease protein [Synechococcus sp. WH 5701] gi|87283611|gb|EAQ75566.1| permease protein [Synechococcus sp. WH 5701] Length = 265 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 9/193 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A+++ I GI +G P ++ P Q L + P+ + Sbjct: 69 LFWQTMASLGRVAQGYFLAALVGIAAGITVGLSPALNRAFDPLFQFLRMVAPLAWVPIAL 128 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ W IL N G P D++ VA ++ R++ ++ Sbjct: 129 VIFQ----KNQPAAIFVIFITAVWPILINTAEGVRQIPQDYRNVALVLQMSKGRFFTKVL 184 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG + G AW A I +E+ G + G+G +I ++ ++ ++VL Sbjct: 185 LPSALPYIFTGLRISIGLAWLAIIAAEIVMSGIV-----GIGFFIWDAYQQNYVSDIVLA 239 Query: 559 VLIMCCFVLALNR 571 V+ + L L+R Sbjct: 240 VIWIGAVGLLLDR 252 Score = 143 bits (361), Expect = 9e-32, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 86/199 (43%), Gaps = 13/199 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + R+ ++ L S L P+ ++ + L ++ Sbjct: 67 KGLFWQTMASLGRVAQGYFLAALVGIAAGITVGLSPALNRAFDPLFQFLRMVAPLAWVPI 126 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +V F P AAIF IF + VW + + + + IP+D V+ ++S + Sbjct: 127 ALVIFQKNQP--------AAIFVIFITAVWPILINTAEGVRQIPQDYRNVALVLQMSKGR 178 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P + + +S+ W ++A+E+++ G + GIG +I A ++ + Sbjct: 179 FFTKVLLPSALPYIFTGLRISIGLAWLAIIAAEIVMSG-----IVGIGFFIWDAYQQNYV 233 Query: 239 LAILYAMLTMLGVIFLYDQ 257 I+ A++ + V L D+ Sbjct: 234 SDIVLAVIWIGAVGLLLDR 252 >gi|307151074|ref|YP_003886458.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306981302|gb|ADN13183.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 279 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 12/250 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIA 397 + + + + ++ YI N F + L + WL ++ RV++ +++ Sbjct: 39 ILWWIVALLNPDLMPTPPEALVANLDYIFNPFYVRGPGNLGIGWLLIASLRRVLIGFVLS 98 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +++ IPVG IG S + P Q+ + P+ ++ + ++ Sbjct: 99 AMVAIPVGFLIGMSKPAMSALNPVIQIFKPVSPLAWLPISLAIF----NQADPSAIFVIF 154 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 + W + N G S+ +D+ +VA + WR IILP PY TG + G A Sbjct: 155 ITSLWPTIINTALGVSSVNSDYLDVAKVLEMPRWRQIYKIILPASLPYIFTGLRISLGIA 214 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 W + E+ + G G+G ++ + + + V L VL++ L L+ L Sbjct: 215 WLVIVAVEMLTGG------LGIGFFVWDEWNRLNLNSVFLAVLVIGLTGLLLDYILGQIQ 268 Query: 578 YLYGTRCLRL 587 L R +L Sbjct: 269 VLVTHRKAKL 278 Score = 137 bits (346), Expect = 5e-30, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 106/265 (40%), Gaps = 23/265 (8%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV------ 58 P I ++ + L +++ I+ +L + T P +V + + Sbjct: 17 TTKPLIIKDQVLLPLAGFLGVLILWWIVALLNPDLM-PTPPEALVANLDYIFNPFYVRGP 75 Query: 59 --HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + R+L V+S + L S+ L P++ I + + L +L Sbjct: 76 GNLGIGWLLIASLRRVLIGFVLSAMVAIPVGFLIGMSKPAMSALNPVIQIFKPVSPLAWL 135 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P +AIF IF + +W + + ++ D +V++ + Sbjct: 136 PISLAIFNQADP--------SAIFVIFITSLWPTIINTALGVSSVNSDYLDVAKVLEMPR 187 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W++ + + +P S+P + + +S+ W +VA EM+ G GIG ++ Sbjct: 188 WRQIYKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------LGIGFFVWDEWNRL 241 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 +L ++ A+L + L D +L + Sbjct: 242 NLNSVFLAVLVIGLTGLLLDYILGQ 266 >gi|91774682|ref|YP_544438.1| nitrate transport permease [Methylobacillus flagellatus KT] gi|91708669|gb|ABE48597.1| nitrate transport permease [Methylobacillus flagellatus KT] Length = 295 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 87/219 (39%), Gaps = 13/219 (5%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 W + + + Y + + W ++ RV + +A+++ IP+G IG I Sbjct: 77 ASTWHAATALFSDPFYVNDPNDQGIGWNILASLQRVALGFGLAALVGIPLGFVIGRFQFI 136 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 S P +L + P+ + + ++ W ++ N G S Sbjct: 137 SRMAAPVIGILRPVSPLAWLPIGLLVFKAA----DPAAIWVIFISAIWPMIINTAVGVSK 192 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA +++ W+ I+ P + PY +TG + G AW + +E+ + G Sbjct: 193 VPQDYMNVARVLNLSEWKIITKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG---- 248 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G ++ + + +++ + ++ L L L Sbjct: 249 --VGIGFWVWDEWNNLNVEHIIIAIFVVGIVGLLLEVAL 285 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 90/217 (41%), Gaps = 18/217 (8%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R+ ++ L + + + + + P++ I++ + L +L Sbjct: 97 NDQGIGWNILASLQRVALGFGLAALVGIPLGFVIGRFQFISRMAAPVIGILRPVSPLAWL 156 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P AAI+ IF S +W M + + +P+D V+R LS Sbjct: 157 PIGLLVFKAADP--------AAIWVIFISAIWPMIINTAVGVSKVPQDYMNVARVLNLSE 208 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W+ + PF +P ++ + +S+ W +VA+EM+ G GIG ++ Sbjct: 209 WKIITKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNL 262 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLE 273 ++ I+ A+ + V L + + + +F E Sbjct: 263 NVEHIIIAIFVVGIVGLLLEVA----LTSIAQRFSYE 295 >gi|251790233|ref|YP_003004954.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] gi|247538854|gb|ACT07475.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] Length = 528 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 75/563 (13%), Positives = 172/563 (30%), Gaps = 73/563 (12%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L + V + ++ V L + R+ + + Sbjct: 33 LLLMCVWWLAGHYDWMSEQILPSPATVADSARDFIPQELAPQLWVSLARLAIGLTGGIAL 92 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 L SR L + +P+ +++ IP L ++ ++ E + + Sbjct: 93 GMTLGVLFGLSRTLDRLGMPLFNVLAQIPTLAWIPLLMLALGIG--------EALKLVVL 144 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + +T + P+ L E++R+ RL + L +P +P ++ ++ S Sbjct: 145 IKAVTVPVTLCTCAGIRQTPQTLYEMARTLRLPRLTRLRRLVIPAMLPYVMTGTRLAFSQ 204 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 GW ++A E++ + G+G + + + L +L +L + +Q+L R Sbjct: 205 GWVSLIAVELLASSE------GLGYLMVQSRQLFMLDLVLVCILAIGAFGLAGEQMLQR- 257 Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGV 322 L R+ F S+ N P + + + Sbjct: 258 -------------------------LERRWIFWPAPVLSNENPTPPAAWHALAGWILPAL 292 Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 + + Q + ++ G++ G ++ Sbjct: 293 LCLLWQLATHQQWVHAAFLPTPREVATTLLAGLSNGELTSAL------------------ 334 Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 ++ R + + + + +G +G + P L + + PL+ + Sbjct: 335 -AASLSRTLAGFALGAGLGCLLGGLLGRSRVADRLLTPLLSALRSVALFAWLPLLTAWFG 393 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + + + L G P E A + + R++ LP + Sbjct: 394 LE----ESVKVVFIALAAFFPTLLASYQGVRHLPPSLLETARVLRLNARQRLRWLTLPAV 449 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +G + AW +I +E G+G+ + + + V+ GV+++ Sbjct: 450 LPALFSGIRLSLMHAWVGTIGAEYF-----IASGNGIGSMMIRAQQLFQSERVIAGVVLI 504 Query: 563 CCFVLALNRFLWHPLYLYGTRCL 585 R + R L Sbjct: 505 ALVSTLFYRLI-----TLAERRL 522 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 92/228 (40%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 PR++ + L L + + R L+ + + L +SR +L Sbjct: 311 LPTPREVATTLLAGLSNGELTSALAASLSRTLAGFALGAGLGCLLGGLLGRSRVADRLLT 370 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+L ++S+ + +L +F KV+ LAA F + YQ + ++ Sbjct: 371 PLLSALRSVALFAWLPLLTAWFGLEESVKVVFIALAAFF--------PTLLASYQGVRHL 422 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 P L E +R RL+ Q+ +L +P +P L + +S+ W + +E + Sbjct: 423 PPSLLETARVLRLNARQRLRWLTLPAVLPALFSGIRLSLMHAWVGTIGAEYFIASGN--- 479 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266 GIGS + A + ++ ++ + V L+ +L+ R + W Sbjct: 480 --GIGSMMIRAQQLFQSERVIAGVVLIALVSTLFYRLITLAERRLTAW 525 >gi|284054400|ref|ZP_06384610.1| nitrate ABC transporter, inner membrane subunit [Arthrospira platensis str. Paraca] Length = 291 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 23/256 (8%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQ 63 +++ P+ +L F++V + + + R + + + +D L Sbjct: 40 GKKLIPSAVAILIFLVVWEVFTAVSDSTLPGPI-RTVSETWELIIDPFFDHGGIDKGLFW 98 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + R+ ++++ L + + L PI I+++IP L +L ++ F Sbjct: 99 QILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISLAGF 158 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 P +AIF IF + +W + + + + IP+D VSR RL F+ + Sbjct: 159 ERANP--------SAIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKI 210 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 P ++P + + + + W ++A+EM++ G GIG +I A + I+ Sbjct: 211 LFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSRMSDIIL 264 Query: 244 AMLTMLGVIFLYDQLL 259 A++ + V L D+ + Sbjct: 265 AVIYVGVVGLLLDKFI 280 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A ++ + +G+ IG + + P Q+L P + P+ + Sbjct: 96 LFWQILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISL 155 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N ++ W I+ N G P D+ V+ + ++ I+ Sbjct: 156 AGFERA----NPSAIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKIL 211 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P PY TG G +W A I +E+ G G+G +I ++ +++L Sbjct: 212 FPATVPYIFTGLKIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSRMSDIILA 265 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L++F+ Sbjct: 266 VIYVGVVGLLLDKFI 280 >gi|146311970|ref|YP_001177044.1| nitrate ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145318846|gb|ABP60993.1| nitrate ABC transporter, inner membrane subunit [Enterobacter sp. 638] Length = 293 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV + +A+I+ IP+G IG S P LL + Sbjct: 92 PNDMGIGWNILASLQRVAIGFGLAAIVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAW 151 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 152 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 207 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 208 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVE 261 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++ ++I+ L L + L Sbjct: 262 NILIAIVIIGVVGLLLEQGL 281 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 18/213 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ + L + + P++ +++ + L +L Sbjct: 96 GIGWNILASLQRVAIGFGLAAIVGIPLGFLIGRFTFFSRMFTPLIALLRPVSPLAWLPIG 155 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P A+ + IF +W M + + + IP+D V+R +LS W Sbjct: 156 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 207 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + P +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 208 MRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNVE 261 Query: 240 AILYAMLTMLGVIFLYDQ---LLFRPMIVWSNK 269 IL A++ + V L +Q L+ R W K Sbjct: 262 NILIAIVIIGVVGLLLEQGLMLIARRF-SWQEK 293 >gi|327393668|dbj|BAK11090.1| nitrate transport permease protein NrtB [Pantoea ananatis AJ13355] Length = 312 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 83/244 (34%), Gaps = 13/244 (5%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY---Q 374 R +R LC + + I W + + Y Sbjct: 53 RPPARLRPLLQRCIPALCGVLLLLLVWQIAALYSQGFPGPYATWAAAKVLFADPFYNNGP 112 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + + W ++ RV + +A+++ IP G +G ++ P LL + Sbjct: 113 NDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWL 172 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 173 PIGLLLFQRAEPASSWT----IFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTIM 228 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 229 RRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVEN 282 Query: 555 VVLG 558 +++ Sbjct: 283 ILIA 286 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 14/188 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R+ ++ L L + + + PI+ +++ + L +L Sbjct: 113 NDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFVARMFNPIIALLRPVSPLAWL 172 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P A+ + IF +W M + + + IP+D V+R +LS Sbjct: 173 PIGLLLFQRAEP--------ASSWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSE 224 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W + P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 225 WTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNL 278 Query: 237 DLLAILYA 244 ++ IL A Sbjct: 279 NVENILIA 286 >gi|237731765|ref|ZP_04562246.1| nitrate ABC transporter [Citrobacter sp. 30_2] gi|226907304|gb|EEH93222.1| nitrate ABC transporter [Citrobacter sp. 30_2] Length = 291 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 95/267 (35%), Gaps = 23/267 (8%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--- 373 T+ V + P + +R L VVC I + ++ Sbjct: 20 LSTMKVRKRKMPWSMWLSTWLRRAVPALLGIALLVVCWQLAAINSKGFPTPLSTLDSALT 79 Query: 374 ----------QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 + + + W ++ RV + +A+++ IP+G IG S P Sbjct: 80 LFADPFYNGGPNDMGIGWNVLASLQRVAIGFGLAALVGIPLGFLIGRFTFFSHMFSPLIA 139 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 LL + P+ + + + + W ++ N G P+D+ VA Sbjct: 140 LLRPVSPLAWLPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPDDYLNVA 195 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++ W R I+ P + P +TG + G AW + +E+ + G G+G +I Sbjct: 196 RVLQLSEWTVMRRILFPAVLPAILTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWI 249 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN 570 + +++ ++I+ L L Sbjct: 250 WNEWNNLNVENILIAIVIIGVVGLLLE 276 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 20/253 (7%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYAS 66 RR P + + V+ + I G D + + + Sbjct: 41 RRAVPALLGIALLVVCWQLAAINSKGFPTPLSTLDSALTLFADPFYNGGPNDMGIGWNVL 100 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++ L L + + P++ +++ + L +L ++ F Sbjct: 101 ASLQRVAIGFGLAALVGIPLGFLIGRFTFFSHMFSPLIALLRPVSPLAWLPIGLLLFQKA 160 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P A+ + IF +W M + + + IP D V+R +LS W + P Sbjct: 161 EP--------ASSWTIFICSIWPMVINTAEGVRRIPDDYLNVARVLQLSEWTVMRRILFP 212 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +P ++ + +S+ W +VA+EM+ G GIG +I ++ IL A++ Sbjct: 213 AVLPAILTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 266 Query: 247 TMLGVIFLYDQLL 259 + V L +Q L Sbjct: 267 IIGVVGLLLEQGL 279 >gi|299529543|ref|ZP_07042980.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni S44] gi|298722406|gb|EFI63326.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni S44] Length = 330 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV + +A+++ IP+G IG +S P LL + P+ + Sbjct: 132 VGWNVLSSLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLPIGL 191 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 192 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 247 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 248 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 301 Query: 559 VLIMCCFVLALN 570 + ++ L L Sbjct: 302 IFVIGIVGLVLE 313 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 86/213 (40%), Gaps = 18/213 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L + + L + P++ +++ + L +L ++ Sbjct: 134 WNVLSSLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLPIGLLV 193 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 194 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 245 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 246 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 299 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275 A+ + V + + M+ ++ F E Sbjct: 300 IAIFVIGIVGLVLEWA----MVKLASAFTFEEV 328 >gi|325285649|ref|YP_004261439.1| ABC-type transporter, integral membrane subunit [Cellulophaga lytica DSM 7489] gi|324321103|gb|ADY28568.1| ABC-type transporter, integral membrane subunit [Cellulophaga lytica DSM 7489] Length = 366 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 14/209 (6%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 Y I + ++ V ++A II +P+G+ IG P + S F Q+ V Sbjct: 149 YTGRASFIDIVLTSIKTVFAGFLLALIIAVPIGVIIGLSPSLRSAFNWFIQIFKPVSPVV 208 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIF-----GTQWYILFNVIAGASAFPNDFKEVASSFH 487 ++ LV V ++ + + ++ F W L N G S+ D+ VA Sbjct: 209 WYLLVFMIVKTLYIGASSDNAFVISFVSVGLCAMWATLVNTAMGVSSVDKDYINVAKVLK 268 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + ++ +ILP P TG AW I E+ + ++ GLG ++ E Sbjct: 269 LGTFQKVFKVILPSSLPLIFTGLRITLSVAWMVLIAIELLA------QSPGLGLFVWEEF 322 Query: 548 EKGSFP---EVVLGVLIMCCFVLALNRFL 573 + G+ ++++ + ++ L+R + Sbjct: 323 QNGANDSNAKIIVAMFVIGIIGFLLDRLM 351 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 80/193 (41%), Gaps = 10/193 (5%) Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG-K 130 + + +++L+ + S L + I + + + + + LY G Sbjct: 166 VFAGFLLALIIAVPIGVIIGLSPSLRSAFNWFIQIFKPVSPVVWYLLVFMIVKTLYIGAS 225 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 A + + ++ +W + + ++ +D V++ +L +QK + + +P S+P Sbjct: 226 SDNAFVISFVSVGLCAMWATLVNTAMGVSSVDKDYINVAKVLKLGTFQKVFKVILPSSLP 285 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILYAMLT 247 + + +++S W ++A E++ PG+G ++ + I+ AM Sbjct: 286 LIFTGLRITLSVAWMVLIAIELLA------QSPGLGLFVWEEFQNGANDSNAKIIVAMFV 339 Query: 248 MLGVIFLYDQLLF 260 + + FL D+L+ Sbjct: 340 IGIIGFLLDRLML 352 >gi|91789128|ref|YP_550080.1| nitrate transport permease [Polaromonas sp. JS666] gi|91698353|gb|ABE45182.1| nitrate transport permease [Polaromonas sp. JS666] Length = 328 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV + +A+I+ IPVG IG +S P LL + P+ + Sbjct: 130 VGWNVLSSLKRVAMGFGMAAIVGIPVGFMIGRFDFLSRMFNPLISLLRPVSPLAWLPIGL 189 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 190 LVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVSKIL 245 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 246 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 299 Query: 559 VLIMCCFVLALN 570 + ++ L L Sbjct: 300 IFVIGIVGLVLE 311 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 84/205 (40%), Gaps = 14/205 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ + + + L + P++ +++ + L +L ++ Sbjct: 132 WNVLSSLKRVAMGFGMAAIVGIPVGFMIGRFDFLSRMFNPLISLLRPVSPLAWLPIGLLV 191 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 192 FKGANP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVSK 243 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 244 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 297 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267 A+ + V + + L + ++ Sbjct: 298 IAIFVIGIVGLVLEFALIKLATAFT 322 >gi|319794681|ref|YP_004156321.1| nitrate ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597144|gb|ADU38210.1| nitrate ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 312 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 95/257 (36%), Gaps = 18/257 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTY--- 373 ++++ +L + W V G WQ + + Y Sbjct: 49 RTPIDLRAFWMRVLPPLAGFGLLLLIWELVAMKSTTGFPTPLATWQQALTVFSDPFYSKG 108 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + V W ++ RV + +A+++ IP G IG ++ P L+ + Sbjct: 109 PNDQGVGWNVLSSLQRVALGFGLAALVGIPAGFAIGRFEFLARMFNPLISLMRPVSPLAW 168 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + N + + W ++ N G P+D+ VA +++ W+ Sbjct: 169 LPIGLLVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWKI 224 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 I+ P + PY +TG A G AW + +E+ + G G+G ++ + + Sbjct: 225 LTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVA 278 Query: 554 EVVLGVLIMCCFVLALN 570 +++ + ++ L L Sbjct: 279 NIIIAIFVIGIVGLVLE 295 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 99/272 (36%), Gaps = 27/272 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65 R+ P + +L+ ++ + T + + + D + Sbjct: 60 RVLPPLAGFGLLLLIWELVAMKSTTGFPTPLA-TWQQALTVFSDPFYSKGPNDQGVGWNV 118 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ ++ L + L + P++ +M+ + L +L ++ F Sbjct: 119 LSSLQRVALGFGLAALVGIPAGFAIGRFEFLARMFNPLISLMRPVSPLAWLPIGLLVFKG 178 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P AAI+ IF +W M + + +P D V++ LS W+ + Sbjct: 179 ANP--------AAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWKILTKILF 230 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ A+ Sbjct: 231 PAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVANIIIAI 284 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 + V + + +I + F E Sbjct: 285 FVIGIVGLVLEFA----LIKLATAFTFEEVKS 312 >gi|322833097|ref|YP_004213124.1| nitrate ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168298|gb|ADW73997.1| nitrate ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 304 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 95/264 (35%), Gaps = 13/264 (4%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + L R V+ + L V + I W++ I Sbjct: 36 AAKTAYLARLRVVMHRVLQKAIPALLGAIVVIALWQIAALSSKGFPTPLKTWEAAKVIFA 95 Query: 370 HFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 Y + + + W ++ RV + +A++I IP G IG I+S + P LL Sbjct: 96 DPFYIAGPNDMGIGWNVLASLKRVAMGFGLAALIGIPAGFLIGRFSFIASMLNPIISLLR 155 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 + P+ + + + W ++ N G P D+ VA Sbjct: 156 PVSPLAWLPIGLLLFQRAEPASAWT----IFICSIWPMILNTAEGVMRIPQDYLNVARVL 211 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 ++ + R I+ P + PY +TG + G AW + +E+ + G G+G +I Sbjct: 212 KLSEFTVMRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNE 265 Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570 + +++ +L++ + L Sbjct: 266 WNNLNVENIIIAILLIGVVGMVLE 289 Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 104/268 (38%), Gaps = 24/268 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYAS 66 ++ P + + + + I + G + ++ + + Sbjct: 54 QKAIPALLGAIVVIALWQIAALSSKGFPTPLKTWEAAKVIFADPFYIAGPNDMGIGWNVL 113 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++ L L + + +L PI+ +++ + L +L ++ F Sbjct: 114 ASLKRVAMGFGLAALIGIPAGFLIGRFSFIASMLNPIISLLRPVSPLAWLPIGLLLFQRA 173 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P A+ + IF +W M + + + IP+D V+R +LS + + P Sbjct: 174 EP--------ASAWTIFICSIWPMILNTAEGVMRIPQDYLNVARVLKLSEFTVMRKILFP 225 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +P ++ + +S+ W +VA+EM+ G GIG +I ++ I+ A+L Sbjct: 226 AVLPYILTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNVENIIIAIL 279 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLER 274 + V + +Q ++ + +F + Sbjct: 280 LIGVVGMVLEQ----GLMAIARRFSYDN 303 >gi|120610821|ref|YP_970499.1| nitrate ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120589285|gb|ABM32725.1| nitrate ABC transporter, inner membrane subunit [Acidovorax citrulli AAC00-1] Length = 315 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 18/255 (7%) Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNHFTY---QDVLY 378 +L + +L + W V I W+ I + Y + Sbjct: 57 LRRFWLAVLPPACGIGLLLVVWAIVSTTTGGSIPNPSDTWKQAVEIFSDPFYRNGPNDQG 116 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV V +A+++ IP G IG +S P LL + P+ + Sbjct: 117 VGWNVLASLERVAVGFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLPIGL 176 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 177 LVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 232 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 233 FPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNILIA 286 Query: 559 VLIMCCFVLALNRFL 573 + ++ L L L Sbjct: 287 IFVIGIVGLLLEYAL 301 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYASRTTLRMLS 74 + +LV+ I G V I D + + R+ Sbjct: 71 IGLLLVVWAIVSTTTGGSIPNPSDTWKQAVEIFSDPFYRNGPNDQGVGWNVLASLERVAV 130 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 ++ + + + L + P++ +++ + L +L ++ F P Sbjct: 131 GFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANP------ 184 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 AAI+ IF +W M + + +P+D V+R LS W+ + P +P ++ Sbjct: 185 --AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPSVLPYMLT 242 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + +++ W +VA+EM+ G GIG ++ ++ IL A+ + V L Sbjct: 243 GVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNILIAIFVIGIVGLL 296 Query: 255 YDQLLFRPMIVWS 267 + L + +S Sbjct: 297 LEYALVKLATAFS 309 >gi|264676723|ref|YP_003276629.1| nitrate ABC transporter inner membrane subunit [Comamonas testosteroni CNB-2] gi|262207235|gb|ACY31333.1| nitrate ABC transporter, inner membrane subunit [Comamonas testosteroni CNB-2] Length = 330 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV + +A+++ IP+G IG +S P LL + P+ + Sbjct: 132 VGWNVLSSLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLPIGL 191 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 192 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 247 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 248 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 301 Query: 559 VLIMCCFVLALN 570 + ++ L L Sbjct: 302 IFVIGIVGLVLE 313 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 86/213 (40%), Gaps = 18/213 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L + + L + P++ +++ + L +L ++ Sbjct: 134 WNVLSSLQRVALGFGLAALVGIPLGFVIGRFGFLSRMFNPLISLLRPVSPLAWLPIGLLV 193 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 194 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWKIATT 245 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 246 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 299 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT 275 A+ + V + + ++ ++ F E Sbjct: 300 IAIFVIGIVGLVLEWA----LVKLASAFTFEEV 328 >gi|114321735|ref|YP_743418.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114228129|gb|ABI57928.1| nitrate ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 279 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ +A ++ IP+G +G P + + P+ Q+L + PL + + Sbjct: 91 SIGRVLAGYGLAVLVAIPLGFVVGMSPVMQKALNPYIQVLRPISPLAWMPLALYIIQ--- 147 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ + W IL N G + D VA + ++ + +ILP P Sbjct: 148 -DSVQSAIFVIFICSVWPILVNTAFGVAGVKKDLLNVARTLQLSPVKTAFSVILPAAAPT 206 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G +W + +E+ G TG+G ++ V+ VL++ Sbjct: 207 ILTGMRIAIGISWLVIVAAEMLVGG------TGVGYFVWNQWNNLDLTSVIFAVLMIGIV 260 Query: 566 VLALNRFL 573 + L+ L Sbjct: 261 GMILDSML 268 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 90/195 (46%), Gaps = 14/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + R+L+ +++L + S + L P + +++ I L ++ + Sbjct: 88 LAHSIGRVLAGYGLAVLVAIPLGFVVGMSPVMQKALNPYIQVLRPISPLAWMPLALYIIQ 147 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + +AIF IF VW + + + + +DL V+R+ +LS + + + Sbjct: 148 DSV--------QSAIFVIFICSVWPILVNTAFGVAGVKKDLLNVARTLQLSPVKTAFSVI 199 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +++ W +VA+EM+V G G+G ++ DL ++++A Sbjct: 200 LPAAAPTILTGMRIAIGISWLVIVAAEMLVGGT------GVGYFVWNQWNNLDLTSVIFA 253 Query: 245 MLTMLGVIFLYDQLL 259 +L + V + D +L Sbjct: 254 VLMIGIVGMILDSML 268 >gi|188533859|ref|YP_001907656.1| Nitrate transporter permease component [Erwinia tasmaniensis Et1/99] gi|188028901|emb|CAO96767.1| Nitrate transporter permease component [Erwinia tasmaniensis Et1/99] Length = 287 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 10/197 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV +A+++ IP G IG I++ P LL + Sbjct: 86 PNDMGIGWNLLASLRRVATGFGLAAMVGIPAGFLIGRFHFIANMFNPIISLLRPVSPLAW 145 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + W ++ N G P D+ VA +++ + Sbjct: 146 LPIGLLLFQRAEPASAWT----IFICSIWPMILNTAEGVKRIPQDYLNVARVLNLSEFTV 201 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R I+ P + PY +TG + G AW + +E+ + G G+G +I + Sbjct: 202 MRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVE 255 Query: 554 EVVLGVLIMCCFVLALN 570 +++ ++++ + L Sbjct: 256 NIIIAIVLIGVVGMVLE 272 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 108/279 (38%), Gaps = 24/279 (8%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----- 56 FL L I +RI P I L+ + + I + G ++ Sbjct: 26 FLNRQLIRRIGQRIIPAILGLVVLLAIWQIAALSSKGFPTPLKSLAAAKVIFADPFYIAG 85 Query: 57 -DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + + + R+ + ++ + L + + + PI+ +++ + L + Sbjct: 86 PNDMGIGWNLLASLRRVATGFGLAAMVGIPAGFLIGRFHFIANMFNPIISLLRPVSPLAW 145 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L ++ F P A+ + IF +W M + + + IP+D V+R LS Sbjct: 146 LPIGLLLFQRAEP--------ASAWTIFICSIWPMILNTAEGVKRIPQDYLNVARVLNLS 197 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 198 EFTVMRKILFPAVLPYILTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNN 251 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 ++ I+ A++ + V + +Q ++ + +F + Sbjct: 252 LNVENIIIAIVLIGVVGMVLEQ----GLMAIARRFSYDN 286 >gi|78485498|ref|YP_391423.1| binding-protein dependent transport system inner membrane protein [Thiomicrospira crunogena XCL-2] gi|78363784|gb|ABB41749.1| ATP-binding cassette (ABC) superfamily nitrate transporter, permease component [Thiomicrospira crunogena XCL-2] Length = 332 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 16/217 (7%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 GY+ Y ++ V+ I+ASII IP+GI IG + + + P Q+ Sbjct: 104 GYVPTIRDYTGPPTFFEQIGRSLVTVMSGFILASIIAIPIGIVIGLSANAYAAVNPLIQI 163 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLW-------LSLLMIFGTQWYILFNVIAGASAFPN 477 + PLV VS ++ + ++ W + N AG + Sbjct: 164 FKPVSPLAWLPLVTMVVSAVYVTDDPAFDKAFLNSMFTVLLCCLWPTIINTAAGVATVTQ 223 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 D K V+ ++ W R I+LP P TG + G AW I +E+ + + Sbjct: 224 DLKNVSQVLRLSWWTHVRKIVLPCSIPMMFTGLRISLGIAWMVLIAAEMLA------QNP 277 Query: 538 GLGAYIAESTEKG---SFPEVVLGVLIMCCFVLALNR 571 GLG ++ + + G S +++ V+++ L+R Sbjct: 278 GLGKFVWDEFQNGSSNSLGRIMVAVIMIGIVGFILDR 314 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 91/212 (42%), Gaps = 14/212 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ + ++S +++ + + S + P++ I + + L +L + Sbjct: 120 EQIGRSLVTVMSGFILASIIAIPIGIVIGLSANAYAAVNPLIQIFKPVSPLAWLPLVTMV 179 Query: 123 FMNLY---PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +Y A L ++F + +W + + + +DL+ VS+ RLS W Sbjct: 180 VSAVYVTDDPAFDKAFLNSMFTVLLCCLWPTIINTAAGVATVTQDLKNVSQVLRLSWWTH 239 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ--- 236 + +P S+P + + +S+ W ++A+EM+ PG+G ++ + Sbjct: 240 VRKIVLPCSIPMMFTGLRISLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSN 293 Query: 237 DLLAILYAMLTMLGVIFLYDQ--LLFRPMIVW 266 L I+ A++ + V F+ D+ L+ + + W Sbjct: 294 SLGRIMVAVIMIGIVGFILDRGMLVLQKAVSW 325 >gi|296271945|ref|YP_003654576.1| nitrate ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096120|gb|ADG92070.1| nitrate ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 269 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 10/182 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 T QD + W ++ RV I+A II +PVG+ IG + ++PF Q+ Sbjct: 64 ITNQDDKGIFWQVLNSLERVFSGFILAIIIGVPVGLAIGMSKNFQIALEPFIQIFKPVSP 123 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL++ + N + + W I+ N G + D+ VA T Sbjct: 124 LAWLPLLLFVFQ----DINATAISTIFVTSIWPIIINTSLGVKSVSEDYMNVAKVLQFTP 179 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 R IILP PY TG + G AW + +E+ + G G+G +I + Sbjct: 180 LEKIRKIILPVAVPYIFTGMRLSLGIAWLVIVAAEMLTGG------IGIGFWIWDEYNNL 233 Query: 551 SF 552 ++ Sbjct: 234 NY 235 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 84/205 (40%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D + + R+ S +++++ S+ + L P + I + + L +L Sbjct: 68 DDKGIFWQVLNSLERVFSGFILAIIIGVPVGLAIGMSKNFQIALEPFIQIFKPVSPLAWL 127 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + F + AI IF + +W + + + ++ D V++ + + Sbjct: 128 PLLLFVFQD--------INATAISTIFVTSIWPIIINTSLGVKSVSEDYMNVAKVLQFTP 179 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 +K + +P ++P + M +S+ W +VA+EM+ G GIG +I Sbjct: 180 LEKIRKIILPVAVPYIFTGMRLSLGIAWLVIVAAEMLTGGI------GIGFWIWDEYNNL 233 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 + I+ ++ + V F+ D ++ + Sbjct: 234 NYFNIIIGIIIVGLVGFMLDIIMGK 258 >gi|149199053|ref|ZP_01876093.1| possible nitrate transport system permease protein [Lentisphaera araneosa HTCC2155] gi|149137842|gb|EDM26255.1| possible nitrate transport system permease protein [Lentisphaera araneosa HTCC2155] Length = 275 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + ++ RV++ A+ I IP+G +G + + PF Q+L + PL + Sbjct: 80 IGIQLFYSLVRVLLGFFAAAAIAIPLGFVVGMSELMYKALNPFIQILKPISPLAWMPLAL 139 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ + W +L N G + D+ +VA + ++ + +I Sbjct: 140 FVIK----DSEKSAIFVIFICSIWPMLLNTAFGVANVRKDWVKVAQTHELSKLKTAFSVI 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG + G AW + +E+ G TG+G Y+ V+ Sbjct: 196 LPASAPTIFTGMRISIGIAWLVIVAAEMLVGG------TGIGYYVWNEWNNLDLNSVIFS 249 Query: 559 VLIMCCFVLALNRFL 573 ++++ + L+ L Sbjct: 250 IIMIGLVGMTLDLIL 264 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 14/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + +R+L + + S + L P + I++ I L ++ + Sbjct: 84 LFYSLVRVLLGFFAAAAIAIPLGFVVGMSELMYKALNPFIQILKPISPLAWMPLALFVIK 143 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + +E +AIF IF +W M + + N+ +D +V+++ LS + + + Sbjct: 144 D--------SEKSAIFVIFICSIWPMLLNTAFGVANVRKDWVKVAQTHELSKLKTAFSVI 195 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P S P + M +S+ W +VA+EM+V G GIG Y+ DL +++++ Sbjct: 196 LPASAPTIFTGMRISIGIAWLVIVAAEMLVGGT------GIGYYVWNEWNNLDLNSVIFS 249 Query: 245 MLTMLGVIFLYDQLL 259 ++ + V D +L Sbjct: 250 IIMIGLVGMTLDLIL 264 >gi|162452310|ref|YP_001614677.1| nitrate/nitrite ABC transporter membrane protein [Sorangium cellulosum 'So ce 56'] gi|161162892|emb|CAN94197.1| nitrate/nitrite ABC transporter membrane protein [Sorangium cellulosum 'So ce 56'] Length = 265 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 15/209 (7%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ ++ RV +A ++ P+G ++G S P Q+L + PL + Sbjct: 69 ILRFTWYSLQRVAKGYTLAILLGTPIGFFLGASRLFKSSFDPIIQILRPVSPLAWLPLGL 128 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 P+ + + W + N G + P D+ VA ++ + + Sbjct: 129 VLFQ----KPDPAGVFTIAMCSMWPTVLNTALGVRSIPQDYMNVARVLRLSRMKTLFKVQ 184 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG + G AW + E+ + + G+G ++ + + ++L Sbjct: 185 LPAALPYMFTGFRLSLGIAWLVIVAVEMLTG------SPGVGGFLWQEYNSLIYEHIILC 238 Query: 559 VLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 ++ + L+ + R L+L Sbjct: 239 IITIGVVGFLLDALM-----SLVERRLKL 262 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 + ++ + R+ +++L SR PI+ I++ + L +L Sbjct: 67 QGILRFTWYSLQRVAKGYTLAILLGTPIGFFLGASRLFKSSFDPIIQILRPVSPLAWLPL 126 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +V F P A +F I +W + + +IP+D V+R RLS + Sbjct: 127 GLVLFQKPDP--------AGVFTIAMCSMWPTVLNTALGVRSIPQDYMNVARVLRLSRMK 178 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + +P ++P + +S+ W +VA EM+ PG+G ++ Sbjct: 179 TLFKVQLPAALPYMFTGFRLSLGIAWLVIVAVEMLTGS------PGVGGFLWQEYNSLIY 232 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ ++T+ V FL D L+ Sbjct: 233 EHIILCIITIGVVGFLLDALM 253 >gi|156933689|ref|YP_001437605.1| hypothetical protein ESA_01511 [Cronobacter sakazakii ATCC BAA-894] gi|156531943|gb|ABU76769.1| hypothetical protein ESA_01511 [Cronobacter sakazakii ATCC BAA-894] Length = 293 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV V +A+++ IP+G IG + P LL + P+ + Sbjct: 97 IGWNVLASLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLPIGL 156 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + W ++ N G P D+ VA ++ W R I+ Sbjct: 157 LLFQKAEPASSWT----IFICSIWPMVINTAEGVKRIPEDYLNVARVLQLSEWTVMRRIL 212 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + P +TG + G AW + +E+ + G G+G +I + +++ Sbjct: 213 FPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVENILIA 266 Query: 559 VLIMCCFVLALN 570 ++I+ L L Sbjct: 267 IVIIGVVGLLLE 278 Score = 146 bits (370), Expect = 8e-33, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 24/265 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASR 67 R+ P I L V+ I + G D + + + Sbjct: 44 RVVPAILGLALLVIAWQIAAVSSKGFPTPLSTLDSALTLFADPFYNDGPNDQGIGWNVLA 103 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ ++ L L + LG + P++ +++ + L +L ++ F Sbjct: 104 SLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLPIGLLLFQKAE 163 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P A+ + IF +W M + + + IP D V+R +LS W + P Sbjct: 164 P--------ASSWTIFICSIWPMVINTAEGVKRIPEDYLNVARVLQLSEWTVMRRILFPA 215 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG +I ++ IL A++ Sbjct: 216 VLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIVI 269 Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269 + V L +Q L+ R W +K Sbjct: 270 IGVVGLLLEQGLMLIARRF-SWQDK 293 >gi|239816496|ref|YP_002945406.1| nitrate ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239803073|gb|ACS20140.1| nitrate ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 309 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 95/258 (36%), Gaps = 18/258 (6%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG-----IAWQSIGYIVNHFTY-- 373 ++++ +L + W V G WQ + + Y Sbjct: 45 PRTPIDLRAFWMRVLPPLAGFGLLVLIWELVAMKSTTGFPSPLATWQQALTVFSDPFYSK 104 Query: 374 -QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + V W ++ RV + +A+ + IP G IG +S P LL Sbjct: 105 GPNDQGVGWNVLSSLQRVALGFGLAAAVGIPAGFAIGRFEFLSRMFNPLISLLRPVSPLA 164 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + P+ + N + + W ++ N G P+D+ VA +++ W+ Sbjct: 165 WLPIGLLVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWK 220 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + I+ P + PY +TG A G AW + +E+ + G G+G ++ + + Sbjct: 221 IFTKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNV 274 Query: 553 PEVVLGVLIMCCFVLALN 570 +++ + ++ L L Sbjct: 275 ANIIIAIFVIGIVGLVLE 292 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 99/272 (36%), Gaps = 27/272 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65 R+ P + VL+ ++ + + + + + D + Sbjct: 57 RVLPPLAGFGLLVLIWELVAMKSTTGFPSPLA-TWQQALTVFSDPFYSKGPNDQGVGWNV 115 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ ++ + L + P++ +++ + L +L ++ F Sbjct: 116 LSSLQRVALGFGLAAAVGIPAGFAIGRFEFLSRMFNPLISLLRPVSPLAWLPIGLLVFKG 175 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P AAI+ IF +W M + + +P D V++ LS W+ F + Sbjct: 176 ANP--------AAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWKIFTKILF 227 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ A+ Sbjct: 228 PAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVANIIIAI 281 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 + V + + +I + F E Sbjct: 282 FVIGIVGLVLEFA----LIKLATAFTFEEVKS 309 >gi|158422385|ref|YP_001523677.1| nitrate ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329274|dbj|BAF86759.1| nitrate ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 284 Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W + D I L ++ RV+ +A + IP+G IG P +S + Sbjct: 71 LWTLLSNPFYDKGPNDKGLGIQL-AFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALD 129 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 PF Q+L + PL + + + ++ ++ + W +L N G ++ ++ Sbjct: 130 PFIQVLKPISPLAWMPLALYTIK----DSSISAVFVIFICSVWPMLINTAFGVASVRKEW 185 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA + + + +ILP P +TG + G AW + +E+ G TG+ Sbjct: 186 LNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG------TGI 239 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G ++ S V++ +L++ + L++ L Sbjct: 240 GYFVWNEWNNLSITNVIIAILVIGVVGMVLDQIL 273 Score = 136 bits (343), Expect = 9e-30, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 89/203 (43%), Gaps = 14/203 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + L + + R+L +++ + S + L P + +++ I L ++ Sbjct: 85 NDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWM 144 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + + + ++A+F IF VW M + + ++ ++ V+R+ + Sbjct: 145 PLALY--------TIKDSSISAVFVIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGP 196 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++ + + +P + P ++ M +S+ W +VA+EM+V G GIG ++ Sbjct: 197 LKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGT------GIGYFVWNEWNNL 250 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 + ++ A+L + V + DQ+L Sbjct: 251 SITNVIIAILVIGVVGMVLDQIL 273 >gi|326317800|ref|YP_004235472.1| nitrate ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374636|gb|ADX46905.1| nitrate ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 315 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 18/255 (7%) Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-----AWQSIGYIVNHFTY---QDVLY 378 +L + +L + W V I W+ I + Y + Sbjct: 57 LRRFWLAVLPPACGIGLLLVVWAIVSTTTGGSIPNPADTWKQAVEIFSDPFYRNGPNDQG 116 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV V +A+++ IP G IG +S P LL + P+ + Sbjct: 117 VGWNVLASLERVAVGFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLPIGL 176 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 177 LVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 232 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 233 FPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNILIA 286 Query: 559 VLIMCCFVLALNRFL 573 + ++ L L L Sbjct: 287 IFVIGIVGLLLEYAL 301 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYASRTTLRMLS 74 + +LV+ I G V I D + + R+ Sbjct: 71 IGLLLVVWAIVSTTTGGSIPNPADTWKQAVEIFSDPFYRNGPNDQGVGWNVLASLERVAV 130 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 ++ + + + L + P++ +++ + L +L ++ F P Sbjct: 131 GFGLAAVVGIPAGFVIGRFTFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANP------ 184 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 AAI+ IF +W M + + +P+D V+R LS W+ + P +P ++ Sbjct: 185 --AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIATTILFPSVLPYMLT 242 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + +++ W +VA+EM+ G GIG ++ ++ IL A+ + V L Sbjct: 243 GVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNILIAIFVIGIVGLL 296 Query: 255 YDQLLFRPMIVWS 267 + L + +S Sbjct: 297 LEYALVKLATAFS 309 >gi|283785488|ref|YP_003365353.1| nitrate transporter permease component [Citrobacter rodentium ICC168] gi|282948942|emb|CBG88545.1| nitrate transporter permease component [Citrobacter rodentium ICC168] Length = 291 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 80/212 (37%), Gaps = 15/212 (7%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV +A+++ IP+G G S P LL + Sbjct: 90 PNDMGIGWNVLASLQRVATGFGLAALVGIPLGFLTGRFTFFSRMFSPLIALLRPVSPLAW 149 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 150 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPADYLNVARVLQLSEWTV 205 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 206 MRRILFPAVLPAILTGIRLSVGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVE 259 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 +++ ++I+ L L + L + R Sbjct: 260 NILIAIVIIGVVGLLLEQGL-----MLAARRF 286 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 20/253 (7%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYAS 66 +R P + VL + I G D + + + Sbjct: 41 QRAVPAALGMGLLVLCWQLAAINSKGFPTPLSTLDSALTLFADPFYNGGPNDMGIGWNVL 100 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ + ++ L L + + P++ +++ + L +L ++ F Sbjct: 101 ASLQRVATGFGLAALVGIPLGFLTGRFTFFSRMFSPLIALLRPVSPLAWLPIGLLLFQKA 160 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P A+ + IF +W M + + + IP D V+R +LS W + P Sbjct: 161 EP--------ASSWTIFICSIWPMVINTAEGVRRIPADYLNVARVLQLSEWTVMRRILFP 212 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +P ++ + +S+ W +VA+EM+ G GIG +I ++ IL A++ Sbjct: 213 AVLPAILTGIRLSVGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIV 266 Query: 247 TMLGVIFLYDQLL 259 + V L +Q L Sbjct: 267 IIGVVGLLLEQGL 279 >gi|313682504|ref|YP_004060242.1| nitrate ABC transporter, inner membrane subunit [Sulfuricurvum kujiense DSM 16994] gi|313155364|gb|ADR34042.1| nitrate ABC transporter, inner membrane subunit [Sulfuricurvum kujiense DSM 16994] Length = 263 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +D + W ++ RV +A ++ +P+G+ IG + + PF Q+L + Sbjct: 59 EDDKGIGWQILNSLERVFGGFALAILVGVPLGLLIGMSKNAFIALNPFIQILKPVSPLAW 118 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL++ + NL + + W I+ N G + D+ VA +T + Sbjct: 119 LPLLLFVFK----DINLTAITTIFITSIWPIIINTALGVRSVSEDYLNVAKVLQLTPFEK 174 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 IILP P+ TG + G AW + +E+ + G G+G +I + ++ Sbjct: 175 VFQIILPVAVPFIFTGMRLSLGIAWLVIVAAEMLTGG------IGIGFWIWDEYNNLNYH 228 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++G+ I+ L L+ + Sbjct: 229 SIIIGIAIVGVIGLILDAIM 248 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 86/203 (42%), Gaps = 14/203 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D + + R+ +++L L S+ + L P + I++ + L +L Sbjct: 60 DDKGIGWQILNSLERVFGGFALAILVGVPLGLLIGMSKNAFIALNPFIQILKPVSPLAWL 119 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + F + L AI IF + +W + + + ++ D V++ +L+ Sbjct: 120 PLLLFVFKD--------INLTAITTIFITSIWPIIINTALGVRSVSEDYLNVAKVLQLTP 171 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 ++K + + +P ++P + M +S+ W +VA+EM+ G GIG +I Sbjct: 172 FEKVFQIILPVAVPFIFTGMRLSLGIAWLVIVAAEMLTGGI------GIGFWIWDEYNNL 225 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 + +I+ + + + + D ++ Sbjct: 226 NYHSIIIGIAIVGVIGLILDAIM 248 >gi|260223152|emb|CBA33430.1| Nitrate transport permease protein nrtB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 312 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 18/272 (6%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-----AWQSI 364 + + K + + + L++ +L W V G A I W+ Sbjct: 37 AQSAKPAWQEQATPGYDWSGLLLKVLPPLFGLALLIGIWAMVSIGTASSIPSPLETWKQA 96 Query: 365 GYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 I + Y + V W ++ RV + +A+++ IPVG IG +S P Sbjct: 97 VVIFSDPFYSKGPNDQGVGWNILYSLKRVAMGFGLAAVVGIPVGFMIGRFEFLSRMFNPL 156 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 LL + P+ + N + + W ++ N G P D+ Sbjct: 157 ISLLRPVSPLAWLPIGLLVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMN 212 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 VA +++ W+ I+ P + PY +TG A G AW + +E+ + G G+G Sbjct: 213 VARVLNLSEWKIVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGF 266 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ + + +++ + ++ L L L Sbjct: 267 WVWDEWNNLNVKNIIIAIFVIGIVGLLLEYAL 298 Score = 140 bits (354), Expect = 6e-31, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 102/272 (37%), Gaps = 27/272 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65 ++ P +F L + + +++ + + V I D + Sbjct: 60 KVLPPLFGLALLIGIWAMVS-IGTASSIPSPLETWKQAVVIFSDPFYSKGPNDQGVGWNI 118 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ ++ + + + L + P++ +++ + L +L ++ F Sbjct: 119 LYSLKRVAMGFGLAAVVGIPVGFMIGRFEFLSRMFNPLISLLRPVSPLAWLPIGLLVFKG 178 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P AAI+ IF +W M + + +P+D V+R LS W+ + Sbjct: 179 ANP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILF 230 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ A+ Sbjct: 231 PSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNIIIAI 284 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 + V L + +I + F E Sbjct: 285 FVIGIVGLLLEYA----LIKLATAFTFEEVKS 312 >gi|307292771|ref|ZP_07572617.1| nitrate ABC transporter, inner membrane subunit [Sphingobium chlorophenolicum L-1] gi|306880837|gb|EFN12053.1| nitrate ABC transporter, inner membrane subunit [Sphingobium chlorophenolicum L-1] Length = 318 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 12/215 (5%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLG--CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 ++ + + HF+ QD V G ++ RV++ IA++I + +GI IG + Sbjct: 103 FKGVDIGLTHFSIQDGGDVGIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRAL 162 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 P Q+L P + P+ ++ + L+ W ++ N AG P Sbjct: 163 DPLFQVLRTVPPLAWLPISLAIFQQAQPS----AIFLIFITAIWPVILNTAAGVQTIPAA 218 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 ++ VA + ++ I+LP P+ TG G +W A + +E+ G TG Sbjct: 219 YRNVAKVLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGG------TG 272 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +G +I +S + ++ ++ + AL+R + Sbjct: 273 VGFFIWDSYNSSLLTDTIVALIWIGMVGFALDRIV 307 Score = 143 bits (362), Expect = 6e-32, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 86/200 (43%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + + R+L I+ + L +S L P+ +++++P L +L + Sbjct: 122 GIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQVLRTVPPLAWLPIS 181 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F P +AIF IF + +W + + + IP V++ L+ + Sbjct: 182 LAIFQQAQP--------SAIFLIFITAIWPVILNTAAGVQTIPAAYRNVAKVLALNPVEY 233 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P ++P + + + + W +VA+EM+ G G+G +I + L Sbjct: 234 FVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGGT------GVGFFIWDSYNSSLLT 287 Query: 240 AILYAMLTMLGVIFLYDQLL 259 + A++ + V F D+++ Sbjct: 288 DTIVALIWIGMVGFALDRIV 307 >gi|284052996|ref|ZP_06383206.1| nitrate ABC transporter, permease protein [Arthrospira platensis str. Paraca] gi|291568385|dbj|BAI90657.1| putative nitrate ABC transport permease protein [Arthrospira platensis NIES-39] Length = 271 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 12/205 (5%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 V I W + + D+ + W I++ RV + I+AS+I +P+GI IG Sbjct: 48 VPTASVTIKELWWWLTNPFFNNGPNDMG-IGWNLLISLRRVAIGYIMASVIAVPLGILIG 106 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 + P+ QLL + PL + + +++ + W L N Sbjct: 107 ISKIAAKAFNPYVQLLKPVSPLAWLPLGLYLFR----DSEKTGIFIILISSIWPTLVNTA 162 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G S +D+ +VA + + WR +I+P P ++G + G +W + +E+ Sbjct: 163 FGVSNVNSDYLDVARTLGASRWRTIFKVIIPAALPNIISGLRISMGISWLVIVAAEMLLG 222 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPE 554 TGLG +I P Sbjct: 223 -------TGLGYFIWNEWNNLYLPN 240 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 83/200 (41%), Gaps = 15/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ +++ + L S+ P + +++ + L +L Sbjct: 75 GIGWNLLISLRRVAIGYIMASVIAVPLGILIGISKIAAKAFNPYVQLLKPVSPLAWLPLG 134 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + +E IF I S +W + + N+ D +V+R+ S W+ Sbjct: 135 LYLFRD--------SEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRT 186 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + + +P ++P ++ + +SM W +VA+EM++ G+G +I L Sbjct: 187 IFKVIIPAALPNIISGLRISMGISWLVIVAAEMLLG-------TGLGYFIWNEWNNLYLP 239 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V + DQ+ Sbjct: 240 NIIVAIIIIGLVGLILDQIF 259 >gi|260598202|ref|YP_003210773.1| nitrate transport permease nrtB [Cronobacter turicensis z3032] gi|260217379|emb|CBA31423.1| Nitrate transport permease protein nrtB [Cronobacter turicensis z3032] Length = 293 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV V +A+++ IP+G IG + P LL + P+ + Sbjct: 97 IGWNVLASLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLPIGL 156 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + W ++ N G P+D+ VA ++ W R I+ Sbjct: 157 LLFQKAEPASSWT----IFICSIWPMVINTAEGVKRIPDDYLNVARVLQLSEWTVMRRIL 212 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + P +TG + G AW + +E+ + G G+G +I + +++ Sbjct: 213 FPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNVENILIA 266 Query: 559 VLIMCCFVLALN 570 ++I+ L L Sbjct: 267 IVIIGVVGLLLE 278 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 24/265 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASR 67 R+ P I L V+ I + G D + + + Sbjct: 44 RVVPAILGLALLVIAWQIAAVSSKGFPTPLSTLDSALTLFADPFYNEGPNDQGIGWNVLA 103 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ ++ L L + LG + P++ +++ + L +L ++ F Sbjct: 104 SLSRVAVGFGLAALVGIPLGFLIGRFTFLGRMFNPLIALLRPVSPLAWLPIGLLLFQKAE 163 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P A+ + IF +W M + + + IP D V+R +LS W + P Sbjct: 164 P--------ASSWTIFICSIWPMVINTAEGVKRIPDDYLNVARVLQLSEWTVMRRILFPA 215 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG +I ++ IL A++ Sbjct: 216 VLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVENILIAIVI 269 Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269 + V L +Q L+ R W +K Sbjct: 270 IGVVGLLLEQGLMLIARRF-SWQDK 293 >gi|294011624|ref|YP_003545084.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Sphingobium japonicum UT26S] gi|292674954|dbj|BAI96472.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Sphingobium japonicum UT26S] Length = 324 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 10/210 (4%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 IG+ + + ++ RV++ IA++I + +GI IG + P Q Sbjct: 114 IGFTHFSIQDGGDVGIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQ 173 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 +L P + P+ ++ + L+ W I+ N AG P ++ VA Sbjct: 174 VLRTVPPLAWLPISLAIFQQAQPS----AIFLIFITAIWPIILNTAAGVQTLPVAYRNVA 229 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + ++ I+LP P+ TG G +W A + +E+ G TG+G +I Sbjct: 230 KVLALNPVEYFVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGG------TGVGFFI 283 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +S + ++ ++ + AL+R + Sbjct: 284 WDSYNSSLLTDTIVALIWIGMVGFALDRIV 313 Score = 143 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 86/200 (43%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + + R+L I+ + L +S L P+ +++++P L +L + Sbjct: 128 GIAGHVLTSLSRVLIGYSIAAVIGVALGILIGQSVFAFRALDPLFQVLRTVPPLAWLPIS 187 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F P +AIF IF + +W + + + +P V++ L+ + Sbjct: 188 LAIFQQAQP--------SAIFLIFITAIWPIILNTAAGVQTLPVAYRNVAKVLALNPVEY 239 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P ++P + + + + W +VA+EM+ G G+G +I + L Sbjct: 240 FVRIMLPATVPHMFTGLRIGVGMSWLAIVAAEMVQGGT------GVGFFIWDSYNSSLLT 293 Query: 240 AILYAMLTMLGVIFLYDQLL 259 + A++ + V F D+++ Sbjct: 294 DTIVALIWIGMVGFALDRIV 313 >gi|121609547|ref|YP_997354.1| nitrate ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554187|gb|ABM58336.1| nitrate ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 328 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 10/197 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W +++ RV + +A+++ IP G IG P ++ P LL + PL + Sbjct: 130 LGWNVLMSLQRVAIGFGMAALVGIPAGFVIGRMPFLARMFNPLISLLRPVSPLAWLPLGL 189 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 190 LVFK----GANAAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSEWQIATRIL 245 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 246 LPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 299 Query: 559 VLIMCCFVLALNRFLWH 575 + ++ L L L Sbjct: 300 IFVIGIVGLVLEYALIR 316 Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 88/211 (41%), Gaps = 14/211 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + L + R+ ++ L + + L + P++ +++ + L +L Sbjct: 126 NDQGLGWNVLMSLQRVAIGFGMAALVGIPAGFVIGRMPFLARMFNPLISLLRPVSPLAWL 185 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F GA AAI+ IF +W M + + +P+D V+R LS Sbjct: 186 PLGLLVFK--------GANAAAIWTIFICSIWPMVINTAVGVQRVPQDYMNVARVLNLSE 237 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 WQ + +P +P ++ + +++ W +VA+EM+ G GIG ++ Sbjct: 238 WQIATRILLPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNL 291 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 ++ I+ A+ + V + + L R ++ Sbjct: 292 NVKNIIIAIFVIGIVGLVLEYALIRLASAFT 322 >gi|218437639|ref|YP_002375968.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218170367|gb|ACK69100.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 279 Score = 150 bits (379), Expect = 7e-34, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 12/247 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIA 397 + + + + ++ YI+N F + L + WL ++ RV++ ++ Sbjct: 39 ILWWIVALVNPDLMPTPPEALVANLDYIINPFFVRGPGNLGIGWLLISSLRRVLIGFSLS 98 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +++ IPVG IG S + P Q+L + P+ ++ + ++ Sbjct: 99 ALVAIPVGFLIGMSKPAMSALNPVIQILKPVSPLAWLPISLAIF----NQADPSAIFVIF 154 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 + W + N G ++ +D+ +VA + W+ IILP PY TG + G A Sbjct: 155 ITSLWPTIINTALGVASVNSDYLDVAKVLEMPRWKQIFKIILPASLPYIFTGLRISLGIA 214 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 W + E+ + G G+G +I + + + V L VL++ L L+ L Sbjct: 215 WLVIVAVEMLTGGL------GIGFFIWDEWNRLNLNSVFLAVLVIGLTGLLLDYALGQIQ 268 Query: 578 YLYGTRC 584 L R Sbjct: 269 VLVTHRK 275 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 104/265 (39%), Gaps = 23/265 (8%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV------ 58 P R + + +++ I+ ++ + T P +V + ++ Sbjct: 17 TTKPLIFKDRFLLPLTGFVGVIILWWIVALVNPDLM-PTPPEALVANLDYIINPFFVRGP 75 Query: 59 --HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + R+L +S L L S+ L P++ I++ + L +L Sbjct: 76 GNLGIGWLLISSLRRVLIGFSLSALVAIPVGFLIGMSKPAMSALNPVIQILKPVSPLAWL 135 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P +AIF IF + +W + + ++ D +V++ + Sbjct: 136 PISLAIFNQADP--------SAIFVIFITSLWPTIINTALGVASVNSDYLDVAKVLEMPR 187 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W++ + + +P S+P + + +S+ W +VA EM+ G GIG +I Sbjct: 188 WKQIFKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------LGIGFFIWDEWNRL 241 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 +L ++ A+L + L D L + Sbjct: 242 NLNSVFLAVLVIGLTGLLLDYALGQ 266 >gi|17228105|ref|NP_484653.1| nitrate transport permease protein [Nostoc sp. PCC 7120] gi|17129955|dbj|BAB72567.1| nitrate transport permease protein [Nostoc sp. PCC 7120] Length = 279 Score = 150 bits (378), Expect = 8e-34, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 25/261 (9%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINI--------LLHGIQETTVPRDIVDIVPITLDVHSL 61 F+ +++ P + L F+++ ++ + + ET P I L Sbjct: 21 FLWKKVVPPLVALGIFLVIWQLLCLNPNFKLPGPIETFSETWDPFIINPFFDNGESDKGL 80 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + R+ ++ + + L + + + PI +++++P L +L ++ Sbjct: 81 GWQILSSLGRVGLGFSLAAIAGIILGILIGVNPLVYNAVDPIFQVLRTVPPLAWLPISLA 140 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F P +AIF IF + +W + + + IP+D V++ RL G + F+ Sbjct: 141 AFQQANP--------SAIFVIFITSIWPILLNTTVGVQQIPQDYINVAKVLRLKGVKYFF 192 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDL 238 + P ++P + + + + W +VA+EM+V G GIGS+I A E +L Sbjct: 193 KIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGSFIWDAYNTTTETNL 246 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V L D+L+ Sbjct: 247 SEIILALIYVGLVGLLLDRLV 267 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 13/198 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I I +GI IG P + + + P Q+L P + P+ + Sbjct: 80 LGWQILSSLGRVGLGFSLAAIAGIILGILIGVNPLVYNAVDPIFQVLRTVPPLAWLPISL 139 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N ++ + W IL N G P D+ VA + G +++ I+ Sbjct: 140 AAFQ----QANPSAIFVIFITSIWPILLNTTVGVQQIPQDYINVAKVLRLKGVKYFFKIV 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES---TEKGSFPEV 555 P PY TG G +W A + +E+ G G+G++I ++ T + + E+ Sbjct: 196 FPATVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGSFIWDAYNTTTETNLSEI 249 Query: 556 VLGVLIMCCFVLALNRFL 573 +L ++ + L L+R + Sbjct: 250 ILALIYVGLVGLLLDRLV 267 >gi|209526428|ref|ZP_03274956.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] gi|209493201|gb|EDZ93528.1| nitrate ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] Length = 271 Score = 150 bits (378), Expect = 8e-34, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 12/205 (5%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 + I W + + D+ + W I++ RV + I+AS+I +P+GI IG Sbjct: 48 VPTASLTIKELWWWLTNPFFNNGPNDMG-IGWNLLISLRRVAIGYIMASVIAVPLGILIG 106 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 + P+ QLL + PL + + +++ + W L N Sbjct: 107 ISKIAAKAFNPYVQLLKPVSPLAWLPLGLYLFR----DSEKTGIFIILISSIWPTLVNTA 162 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G S +D+ +VA + + WR +I+P P ++G + G +W + +E+ Sbjct: 163 FGVSNVNSDYLDVARTLGASRWRTIFKVIIPAALPNIISGLRISMGISWLVIVAAEMLLG 222 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPE 554 TGLG +I P Sbjct: 223 -------TGLGYFIWNEWNNLYLPN 240 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 83/200 (41%), Gaps = 15/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ +++ + L S+ P + +++ + L +L Sbjct: 75 GIGWNLLISLRRVAIGYIMASVIAVPLGILIGISKIAAKAFNPYVQLLKPVSPLAWLPLG 134 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + +E IF I S +W + + N+ D +V+R+ S W+ Sbjct: 135 LYLFRD--------SEKTGIFIILISSIWPTLVNTAFGVSNVNSDYLDVARTLGASRWRT 186 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + + +P ++P ++ + +SM W +VA+EM++ G+G +I L Sbjct: 187 IFKVIIPAALPNIISGLRISMGISWLVIVAAEMLLG-------TGLGYFIWNEWNNLYLP 239 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V + DQ+ Sbjct: 240 NIIVAIIIIGLVGLILDQIF 259 >gi|75910738|ref|YP_325034.1| nitrate transport permease [Anabaena variabilis ATCC 29413] gi|75704463|gb|ABA24139.1| Nitrate transport permease [Anabaena variabilis ATCC 29413] Length = 279 Score = 150 bits (378), Expect = 8e-34, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 25/261 (9%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINI--------LLHGIQETTVPRDIVDIVPITLDVHSL 61 F+ +++ P + L F+++ ++ + + ET P I L Sbjct: 21 FLWKKVVPPLVALGIFLVIWQLLCLNPNFKLPGPIETFSETWDPFIINPFFDNGESDKGL 80 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + R+ ++ + + L + + + PI +++++P L +L ++ Sbjct: 81 GWQILSSLGRVGLGFSLAAIAGIILGILIGVNPLVYNAVDPIFQVLRTVPPLAWLPISLA 140 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F P +AIF IF + +W + + + IP+D V++ RL G + F+ Sbjct: 141 AFQQANP--------SAIFVIFITSIWPILINTTVGVQQIPQDYINVAKVLRLKGVKYFF 192 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDL 238 + P ++P + + + + W +VA+EM+V G GIGS+I A E +L Sbjct: 193 KIVFPATVPYIFTGLRIGIGLSWLAIVAAEMLVGGV------GIGSFIWDAYNTTTETNL 246 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V L D+L+ Sbjct: 247 SEIILALIYVGLVGLLLDRLV 267 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 13/198 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I I +GI IG P + + + P Q+L P + P+ + Sbjct: 80 LGWQILSSLGRVGLGFSLAAIAGIILGILIGVNPLVYNAVDPIFQVLRTVPPLAWLPISL 139 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N ++ + W IL N G P D+ VA + G +++ I+ Sbjct: 140 AAFQ----QANPSAIFVIFITSIWPILINTTVGVQQIPQDYINVAKVLRLKGVKYFFKIV 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES---TEKGSFPEV 555 P PY TG G +W A + +E+ G G+G++I ++ T + + E+ Sbjct: 196 FPATVPYIFTGLRIGIGLSWLAIVAAEMLVGG------VGIGSFIWDAYNTTTETNLSEI 249 Query: 556 VLGVLIMCCFVLALNRFL 573 +L ++ + L L+R + Sbjct: 250 ILALIYVGLVGLLLDRLV 267 >gi|329848543|ref|ZP_08263571.1| nitrate ABC transporter, permease protein [Asticcacaulis biprosthecum C19] gi|328843606|gb|EGF93175.1| nitrate ABC transporter, permease protein [Asticcacaulis biprosthecum C19] Length = 299 Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 80/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + IA+++ + G +IG + P Q+L P + P+ + Sbjct: 101 LFWHIMTSLSRVGIGFSIAAVVGVLAGAFIGTVGWARKGLDPMFQVLRTVPPLAWLPISL 160 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ + W I+ N G P D+ V+ + ++ I+ Sbjct: 161 AMLREAQPS----ALFVIFITSIWPIVINTAVGVRNIPVDYINVSRVLRLHPIEFFFKIM 216 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P+ TG G +W A + SE+ G G+G +I + ++++ Sbjct: 217 LPAATPHIFTGLRIGVGMSWLAIVASEMLLGG------VGVGFFIWDQYNSSRISDIIVA 270 Query: 559 VLIMCCFVLALNRFL 573 ++ + L+R + Sbjct: 271 LVWVGLVGYVLDRLV 285 Score = 147 bits (372), Expect = 5e-33, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 86/201 (42%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ I+ + + L P+ +++++P L +L Sbjct: 99 KGLFWHIMTSLSRVGIGFSIAAVVGVLAGAFIGTVGWARKGLDPMFQVLRTVPPLAWLPI 158 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ P +A+F IF + +W + + + NIP D VSR RL + Sbjct: 159 SLAMLREAQP--------SALFVIFITSIWPIVINTAVGVRNIPVDYINVSRVLRLHPIE 210 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F+ + +P + P + + + + W +VASEM++ G G+G +I + Sbjct: 211 FFFKIMLPAATPHIFTGLRIGVGMSWLAIVASEMLLGGV------GVGFFIWDQYNSSRI 264 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ A++ + V ++ D+L+ Sbjct: 265 SDIIVALVWVGLVGYVLDRLV 285 >gi|254442958|ref|ZP_05056434.1| ABC transporter, permease protein [Verrucomicrobiae bacterium DG1235] gi|198257266|gb|EDY81574.1| ABC transporter, permease protein [Verrucomicrobiae bacterium DG1235] Length = 542 Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 76/221 (34%), Gaps = 31/221 (14%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++F V V +A+ + IPVGI G + + P + V+ + V + Sbjct: 319 SIFTVFVGFFMAAFVAIPVGIMCGLNKIFMACMTPIISIFKPVSPVVWLLIFQIVVGAFF 378 Query: 446 LNPN-----------------------LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 +P ++ + + W L N G ++ D V Sbjct: 379 PDPENHAMLNFLNSLPLISSLEINPALIFSACTVAMCAVWPALVNTALGVASIDQDHVNV 438 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A + W I++P P G + G W I +E S + GLG + Sbjct: 439 ARVLRLGFWSRLFKIVIPSALPLVFAGLRISLGVGWMVLIAAEALS------SSDGLGKF 492 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTR 583 + + + G + +IM CFV+ + F + + R Sbjct: 493 VWDEYQNG--SSLTFANIIMVCFVVGIIGFFLDRMMIILQR 531 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 77/215 (35%), Gaps = 28/215 (13%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 R+ + ++ + ++ + PI+ I + + + +L + Sbjct: 318 RSIFTVFVGFFMAAFVAIPVGIMCGLNKIFMACMTPIISIFKPVSPVVWLLIFQIVVGAF 377 Query: 127 YPG----------------KVIGAELAAIF---AIFTSQVWNMTFSMYQSLCNIPRDLEE 167 +P + A IF + VW + + +I +D Sbjct: 378 FPDPENHAMLNFLNSLPLISSLEINPALIFSACTVAMCAVWPALVNTALGVASIDQDHVN 437 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 V+R RL W + + + +P ++P + + +S+ GW ++A+E + D G+G Sbjct: 438 VARVLRLGFWSRLFKIVIPSALPLVFAGLRISLGVGWMVLIAAEALSSSD------GLGK 491 Query: 228 YIALAIKEQD---LLAILYAMLTMLGVIFLYDQLL 259 ++ + I+ + + F D+++ Sbjct: 492 FVWDEYQNGSSLTFANIIMVCFVVGIIGFFLDRMM 526 >gi|291571065|dbj|BAI93337.1| nitrate ABC-type transport permease protein [Arthrospira platensis NIES-39] Length = 278 Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 23/256 (8%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQ 63 +++ P+ +L F++V + + + R + + + +D L Sbjct: 27 GKKLIPSAVAILIFLVVWEVFTAVSDSTLPGPI-RTVSETWELIIDPFFDHGGIDKGLFW 85 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + R+ ++++ L + + L PI I+++IP L +L ++ F Sbjct: 86 QILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISLAGF 145 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 P +AIF IF + +W + + + + IP+D VSR RL F+ + Sbjct: 146 ERANP--------SAIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKI 197 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 P ++P + + + + W ++A+EM++ G GIG +I A + I+ Sbjct: 198 LFPATVPYIFTGLKIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSRMSDIIL 251 Query: 244 AMLTMLGVIFLYDQLL 259 A++ + V L D+ + Sbjct: 252 AVIYVGVVGLLLDKFI 267 Score = 148 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A ++ + +G+ IG + + P Q+L P + P+ + Sbjct: 83 LFWQILTSLQRVALGFSLAVVVGVSLGVLIGTNTLMYRALDPIFQILRTIPPLAWLPISL 142 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ W I+ N G P D+ V+ + ++ I+ Sbjct: 143 AGFERANPS----AIFVIFITAIWPIIINTTEGVRQIPQDYNNVSRVLRLDRKTYFFKIL 198 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P PY TG G +W A I +E+ G G+G +I ++ +++L Sbjct: 199 FPATVPYIFTGLKIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSRMSDIILA 252 Query: 559 VLIMCCFVLALNRFL 573 V+ + L L++F+ Sbjct: 253 VIYVGVVGLLLDKFI 267 >gi|73540035|ref|YP_294555.1| nitrate transport permease [Ralstonia eutropha JMP134] gi|72117448|gb|AAZ59711.1| Nitrate transport permease [Ralstonia eutropha JMP134] Length = 300 Score = 149 bits (377), Expect = 9e-34, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 83/212 (39%), Gaps = 13/212 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 G W + + Y + V W ++ RV +A++I IP G +G + Sbjct: 80 GATWNAAVPLFADPFYRNGPNDQGVGWNVLASLARVGAGFGLAALIGIPAGFILGRFAFL 139 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ P LL + P+ + N + + W ++ N G + Sbjct: 140 NAMASPVISLLRPVSPLAWLPIGLLLFKAA----NPAAIWAIFICSIWPMVINTAVGVTR 195 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ W+ + ++ P + PY +TG + G AW + +E+ + G Sbjct: 196 VPQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG---- 251 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 TG+G ++ + +V+ + ++ Sbjct: 252 --TGIGFWLWDEWNNLKVEHIVIAIFVIGIIG 281 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 94/245 (38%), Gaps = 20/245 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 R P + FVL I ++ I VP + + Sbjct: 51 RGVPPLLGFALFVLAWHGIATMIPAIPTPGATWNAAVPLFADPFYRNGPNDQGVGWNVLA 110 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ L + + L + P++ +++ + L +L ++ F Sbjct: 111 SLARVGAGFGLAALIGIPAGFILGRFAFLNAMASPVISLLRPVSPLAWLPIGLLLFKAAN 170 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 171 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFPA 222 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 223 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFV 276 Query: 248 MLGVI 252 + + Sbjct: 277 IGIIG 281 >gi|309779956|ref|ZP_07674710.1| nitrate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308921315|gb|EFP66958.1| nitrate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 287 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 98/267 (36%), Gaps = 17/267 (6%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVN 369 +R F ++ + + W + + + W++ + Sbjct: 19 AAPESRRFAVRDWFVAAVVRGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFA 78 Query: 370 HFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 Y + V W ++ RV +A++I IP G IG +++ P LL Sbjct: 79 DPFYRNGPNDQGVGWNVLASLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLR 138 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 + P+ + + N + + W ++ N G + P D+ VA Sbjct: 139 PVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVL 194 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 +++ W+ + ++ P + PY +TG + G AW + +E+ + G G+G ++ + Sbjct: 195 NLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDE 248 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573 +V+ + ++ L L L Sbjct: 249 WNNLKVEHIVIAIFVIGVVGLLLEHAL 275 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 R FP + L+ FVL I + + + V + + Sbjct: 38 RGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLA 97 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 98 SLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 157 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 158 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPA 209 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 210 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 263 Query: 248 MLGVIFLYDQLLF 260 + V L + L Sbjct: 264 IGVVGLLLEHALL 276 >gi|119897234|ref|YP_932447.1| putative nitrate transport system permease [Azoarcus sp. BH72] gi|119669647|emb|CAL93560.1| putative nitrate transport system, permease protein [Azoarcus sp. BH72] Length = 310 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 13/217 (5%) Query: 360 AWQSIGYIVNHFTYQ---DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 W + + + YQ + + W ++ RV + IA+++ IP G +G +S Sbjct: 92 TWNAAVVLFSDPFYQAGPNDQGIGWNVLSSLQRVGIGFGIAALVGIPAGFMLGRFAVLSQ 151 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + P LL + P+ + + + W ++ N G + P Sbjct: 152 MMNPIISLLRPVSPLAWLPIGLLVFQRADPAATWT----IFICSIWPMILNTAQGVTRVP 207 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D+ VA +++ W+ + I+ P + PY +TG + G AW + +E+ + G Sbjct: 208 QDYLNVARVLNLSEWKVFTKILFPAVLPYMLTGIRLSIGTAWLVIVAAEMLTGG------ 261 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G ++ + +++ + ++ L L + L Sbjct: 262 VGIGFWVWDEWNNLKVEHIIIAIFVIGTVGLILEQAL 298 Score = 146 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 97/253 (38%), Gaps = 20/253 (7%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV------DIVPITLDVHSLPQYAS 66 R + P + L V + + + G+ + + + Sbjct: 60 RAVLPPVIGLALLVGLWHLGTMNGGGLPSPAKTWNAAVVLFSDPFYQAGPNDQGIGWNVL 119 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ I+ L + + L ++ PI+ +++ + L +L ++ F Sbjct: 120 SSLQRVGIGFGIAALVGIPAGFMLGRFAVLSQMMNPIISLLRPVSPLAWLPIGLLVFQRA 179 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P AA + IF +W M + Q + +P+D V+R LS W+ F + P Sbjct: 180 DP--------AATWTIFICSIWPMILNTAQGVTRVPQDYLNVARVLNLSEWKVFTKILFP 231 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 232 AVLPYMLTGIRLSIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLKVEHIIIAIF 285 Query: 247 TMLGVIFLYDQLL 259 + V + +Q L Sbjct: 286 VIGTVGLILEQAL 298 >gi|17230827|ref|NP_487375.1| ABC nitrate transport permease protein [Nostoc sp. PCC 7120] gi|17132430|dbj|BAB75034.1| ABC nitrate transport permease protein [Nostoc sp. PCC 7120] Length = 273 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 WL ++ RVVV ++A+ I IP+G I I P QLL + PL Sbjct: 78 FFWLILASLKRVVVGYLLATFIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQ 137 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + L PN ++ W I+ N G P D++ V+ ++ + I+ Sbjct: 138 AVF----LKPNPSAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLENFYKIL 193 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG A G +W A + +E+ L G+G +I ++ + E++L Sbjct: 194 LPATLPYIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILA 247 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L++ + Sbjct: 248 IVYLGAVGLVLDKIM 262 Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 87/194 (44%), Gaps = 14/194 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R++ +++ + + + + P++ +++ + L +L F+ Sbjct: 83 LASLKRVVVGYLLATFIGIPIGFIISLNSFCRKAIDPLIQLLRPVAPLAWLPLAQAVFLK 142 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF I + +W + + + +P+D VS+ LS + F+ + + Sbjct: 143 PNP--------SAIFVICITAIWPIILNTALGVKLVPKDYRNVSKLLGLSPLENFYKILL 194 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + + +++ W VVA+EM+ + GIG +I A ++ ++ A+ Sbjct: 195 PATLPYIFTGLRIAIGLSWLAVVAAEML------LSDDGIGFFIVDAYNNANIHEMILAI 248 Query: 246 LTMLGVIFLYDQLL 259 + + V + D+++ Sbjct: 249 VYLGAVGLVLDKIM 262 >gi|254469776|ref|ZP_05083181.1| ABC transporter permease protein [Pseudovibrio sp. JE062] gi|211961611|gb|EEA96806.1| ABC transporter permease protein [Pseudovibrio sp. JE062] Length = 668 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 92/532 (17%), Positives = 185/532 (34%), Gaps = 40/532 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L V Q A T + A+ ++ V LA KS +L PILD+MQ++PI + Sbjct: 148 LAVFGQWQSAMVTLASIAIAVPFGVIGGLVLGILAYKSAGFERLLRPILDLMQTVPIFAY 207 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L + F ++A+FA + M + +L ++P L E + + Sbjct: 208 LVPILFLFG--------FGPVSALFATIIYAMPPMVRVVLVALQSVPTQLHEAGQMAGCT 259 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 Q W + +P ++P L+ + + V+ + +I G G+G + A++ Sbjct: 260 SRQMMWKVLLPSALPTLMVGVNQVIMLSLNMVIIASIIGAG-------GLGYDVLAALRR 312 Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKT 292 D+ + A L ++ + D+L + + K ++ + +L + Sbjct: 313 LDIGGGIEAGLAIVVIAIALDRLSQAFSQQDHGQNEKLGIDHIKPLPLVGIVLLSIVVLA 372 Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI------ 346 + + + + I +F E F + +L I Sbjct: 373 LLGKLFPFLQSYPETLTVTTGSFWDEAIKWININFFEVFEAFKTALLTYLLLPIKRFFVG 432 Query: 347 --FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIW 401 + + +V IG + + T + V L IT++ V +++A+ I Sbjct: 433 IPWAWGIVALGLIGWRVGDLKLGLLCTTLAGFIAVNGLWRDAMITVYLCGVSVLLAAAIG 492 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+G+W G + + L P+ V+ VV + + + L + Sbjct: 493 MPLGVWAGQSELANRVLGTLVDTLQTLPSFVYLIPVVMLFRVGEFSAMVAIVLYAMAPAL 552 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 Y G E T W+ I LP P + G A + Sbjct: 553 RY----AAHGIREINPQVIEAGKVSGCTRWQLLWRIKLPLAVPSLLLGLNQTIMLALSML 608 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +++ + LG + + K + + ++ L + + +R L Sbjct: 609 VITALVGTRD-------LGQEVYIALTKANTGQGIVAGLAVAFIAIIADRIL 653 Score = 63.8 bits (154), Expect = 8e-08, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 88/301 (29%), Gaps = 20/301 (6%) Query: 281 ADSWVLYLFRK-TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 +W L + ++F+ ++ + + + V ++ Sbjct: 46 PSAWEWKLDNRISSFMSWLVEDASFELFTFRELTRFFSALIEVPYDAVRALLADGFNSGV 105 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +++ V + + + ++L ++ ++ + + Sbjct: 106 GQQAVEVLPSLSWIAVTLLLTLLAFRVGGRRLALLVAGCFLYLAVFGQWQSAMVTLASIA 165 Query: 400 IWIPVGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 I +P G+ G ++P L+ P + ++ + ++ Sbjct: 166 IAVPFGVIGGLVLGILAYKSAGFERLLRPILDLMQTVPIFAYLVPILFLFGFGPVS---- 221 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 I ++ V+ + P E T + ++LP P + G Sbjct: 222 ALFATIIYAMPPMVRVVLVALQSVPTQLHEAGQMAGCTSRQMMWKVLLPSALPTLMVGVN 281 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + N I++ + G GLG + + + + L + +AL+R Sbjct: 282 QVIMLSLNMVIIASIIGAG-------GLGYDVLAALRRLDIGGGIEAGLAIVVIAIALDR 334 Query: 572 F 572 Sbjct: 335 L 335 >gi|188591095|ref|YP_001795695.1| nitrate ABC transporter transmembrane protein [Cupriavidus taiwanensis LMG 19424] gi|170937989|emb|CAP62973.1| NITRATE ABC TRANSPORTER, TRANSMEMBRANE component [Cupriavidus taiwanensis LMG 19424] Length = 296 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 13/212 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 G W + + Y + + W ++ RV +A+++ IP G IG + Sbjct: 76 GATWNAAVPLFADPFYRNGPNDQGIGWNVLASLARVAAGFGLAALVGIPAGFVIGRFAFL 135 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ P LL + P+ + N + + W ++ N G + Sbjct: 136 NAMTAPVISLLRPVSPLAWLPIGLLLFKAA----NPAAIWAIFICSIWPMVINTAVGVTR 191 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ W+ + ++ P + PY +TG + G AW + +E+ + G Sbjct: 192 VPQDYLNVARVLDLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG---- 247 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 TG+G ++ + +V+ + ++ Sbjct: 248 --TGIGFWLWDEWNNLKVEHIVIAIFVIGLIG 277 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 93/242 (38%), Gaps = 20/242 (8%) Query: 17 PNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 P + FVL I L+ I VP + + + Sbjct: 50 PPLLGFALFVLAWHGIASLIPAIPTPGATWNAAVPLFADPFYRNGPNDQGIGWNVLASLA 109 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + ++ L + + L + P++ +++ + L +L ++ F P Sbjct: 110 RVAAGFGLAALVGIPAGFVIGRFAFLNAMTAPVISLLRPVSPLAWLPIGLLLFKAANP-- 167 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 AAI+AIF +W M + + +P+D V+R LS W+ F + P +P Sbjct: 168 ------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFPAVLP 221 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ + Sbjct: 222 YMLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFVIGL 275 Query: 251 VI 252 + Sbjct: 276 IG 277 >gi|300310541|ref|YP_003774633.1| nitrate transporter permease [Herbaspirillum seropedicae SmR1] gi|300073326|gb|ADJ62725.1| ABC-type nitrate transporter, permease component protein [Herbaspirillum seropedicae SmR1] Length = 307 Score = 149 bits (376), Expect = 2e-33, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 10/173 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A+++ IP+G IG ++ P LL + P+ + Sbjct: 109 IGWNVLASLQRVGTGFGLAALVGIPLGFAIGRVEFLARMFGPIISLLRPVSPLAWLPIGL 168 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 169 LVFK----SANPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKIL 224 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 P + PY +TG + G AW + +E+ + G G+G ++ + + Sbjct: 225 FPSVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLN 271 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 94/222 (42%), Gaps = 18/222 (8%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 + + + + R+ + ++ L + L + PI+ +++ + L Sbjct: 103 SPNDQGIGWNVLASLQRVGTGFGLAALVGIPLGFAIGRVEFLARMFGPIISLLRPVSPLA 162 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L ++ F + P AAI++IF +W M + + +P+D V+R L Sbjct: 163 WLPIGLLVFKSANP--------AAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNL 214 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 S W+ + P +P ++ + +S+ W +VA+EM+ G GIG ++ Sbjct: 215 SEWKVLTKILFPSVLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWVWDEWN 268 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 ++ I+ A++ + V + +QL ++ + F E+ Sbjct: 269 NLNVPHIIIAIVVIGVVGLVLEQL----LVALAKAFTYEQVN 306 >gi|283781845|ref|YP_003372600.1| nitrate ABC transporter, inner membrane subunit [Pirellula staleyi DSM 6068] gi|283440298|gb|ADB18740.1| nitrate ABC transporter, inner membrane subunit [Pirellula staleyi DSM 6068] Length = 279 Score = 148 bits (375), Expect = 2e-33, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 76/195 (38%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ ++ V ++A ++ P+G +G P ++ P Q L + PL + Sbjct: 85 ILRFTWYSLVLVAKGYLLAIVLGAPLGFALGSSPLLTRMFDPVIQFLRPVSPLAWLPLGL 144 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + W + N G A P D+ VA ++ W I+ Sbjct: 145 VLFG----KSEPAAIFTIALCSMWPTVINTAQGVRAIPQDYLNVARVLRLSSWTMLWKIM 200 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG + G AW + +E+ + G+G ++ + + ++L Sbjct: 201 LPAALPYMFTGFRLSLGIAWLVIVAAEMLTG------VPGVGGFLWQEYNSLIYEHILLC 254 Query: 559 VLIMCCFVLALNRFL 573 +L + LAL+R + Sbjct: 255 ILTIGAVGLALDRLM 269 Score = 147 bits (371), Expect = 6e-33, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 98/254 (38%), Gaps = 29/254 (11%) Query: 21 DLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDV--------------HSLPQYA 65 D + LV ++ + + I T P + + + ++ Sbjct: 30 DFILLPLVGALLFVAVWWISSATWAPSLPSPLKTWEMSRLYVMEPFAKRGELDQGILRFT 89 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + + + +++++ S L + P++ ++ + L +L +V F Sbjct: 90 WYSLVLVAKGYLLAIVLGAPLGFALGSSPLLTRMFDPVIQFLRPVSPLAWLPLGLVLFGK 149 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P AAIF I +W + Q + IP+D V+R RLS W W + + Sbjct: 150 SEP--------AAIFTIALCSMWPTVINTAQGVRAIPQDYLNVARVLRLSSWTMLWKIML 201 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + +S+ W +VA+EM+ +PG+G ++ IL + Sbjct: 202 PAALPYMFTGFRLSLGIAWLVIVAAEMLTG------VPGVGGFLWQEYNSLIYEHILLCI 255 Query: 246 LTMLGVIFLYDQLL 259 LT+ V D+L+ Sbjct: 256 LTIGAVGLALDRLM 269 >gi|113866388|ref|YP_724877.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525164|emb|CAJ91509.1| ABC-type transporter, permease component: NitT family [Ralstonia eutropha H16] Length = 301 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A+++ IP G IG +++ P LL + P+ + Sbjct: 105 IGWNVLASLARVAAGFGLAALVGIPAGFLIGRFAFLNAMTAPVISLLRPVSPLAWLPIGL 164 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G + P D+ VA ++ W+ + ++ Sbjct: 165 LLFKAA----NPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVL 220 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG + G AW + +E+ + G TG+G ++ + +V+ Sbjct: 221 FPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKVEHIVIA 274 Query: 559 VLIMCCFV 566 + ++ Sbjct: 275 IFVIGIIG 282 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 94/245 (38%), Gaps = 20/245 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 + P + FVL I ++ I VP + + Sbjct: 52 KAVPPVLGFALFVLAWHGIATMIPAIPTPQATWNAAVPLFADPFYRNGPNDQGIGWNVLA 111 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ L L + L + P++ +++ + L +L ++ F Sbjct: 112 SLARVAAGFGLAALVGIPAGFLIGRFAFLNAMTAPVISLLRPVSPLAWLPIGLLLFKAAN 171 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 172 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLDLSEWKVFTRVLFPA 223 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 224 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFV 277 Query: 248 MLGVI 252 + + Sbjct: 278 IGIIG 282 >gi|253998066|ref|YP_003050129.1| nitrate ABC transporter inner membrane subunit [Methylovorus sp. SIP3-4] gi|253984745|gb|ACT49602.1| nitrate ABC transporter, inner membrane subunit [Methylovorus sp. SIP3-4] Length = 305 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A++I IP+G IG +S P +L + P+ + Sbjct: 111 IGWNILASLERVGLGFGLAALIGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLPIGL 170 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N ++ W ++ N G S P D+ VA +++ W+ I+ Sbjct: 171 LVFKAA----NPAAIWVIFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKIL 226 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG + G AW + +E+ + G G+G ++ + + +++ Sbjct: 227 FPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVEHIIIA 280 Query: 559 VLIMCCFV 566 + ++ Sbjct: 281 IFVVGIVG 288 Score = 146 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 97/244 (39%), Gaps = 20/244 (8%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV------DIVPITLDVHSLPQYASRT 68 + P +F +LA + V +I+ + + + + + Sbjct: 59 LLPPVFGVLAMIAVWTLISYQSPNLPGPVSTWHSAVELFSDPFYNNSPNDQGIGWNILAS 118 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ ++ L + + + + + PI+ I++ + L +L ++ F P Sbjct: 119 LERVGLGFGLAALIGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLPIGLLVFKAANP 178 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 AAI+ IF S +W M + + +P+D V++ LS W+ + PF Sbjct: 179 --------AAIWVIFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFV 230 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P ++ + +S+ W +VA+EM+ G GIG ++ ++ I+ A+ + Sbjct: 231 LPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHIIIAIFVV 284 Query: 249 LGVI 252 V Sbjct: 285 GIVG 288 >gi|224825054|ref|ZP_03698160.1| nitrate ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224602725|gb|EEG08902.1| nitrate ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 304 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 13/210 (6%) Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 W+S + Y + V W ++ RV + +A+++ IP G +G +S+ Sbjct: 85 TWESAKLLFADPFYRNGPNDQGVGWNILNSLGRVGIGFGLAALVGIPAGFILGRFAFVSA 144 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 P LL + P+ + + ++ + W ++ N AG A P Sbjct: 145 MFAPVISLLRPVSPLAWLPIGLLVFKAA----SPASIWVIFISSVWPMILNTAAGVRAVP 200 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D+ VA ++ ++ + I+ P + P+ +TG + G AW + +E+ + G Sbjct: 201 QDYLNVARVLRLSEFKVFTTILFPSVLPHVLTGVRLSIGVAWLVIVAAEMLTGG------ 254 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G+G ++ + + +++ + I+ Sbjct: 255 VGIGFWVWDEWNNLNVEHIIIAIFIVGLVG 284 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 81/190 (42%), Gaps = 14/190 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L + + + + P++ +++ + L +L ++ Sbjct: 109 WNILNSLGRVGIGFGLAALVGIPAGFILGRFAFVSAMFAPVISLLRPVSPLAWLPIGLLV 168 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P A+I+ IF S VW M + + +P+D V+R RLS ++ F Sbjct: 169 FKAASP--------ASIWVIFISSVWPMILNTAAGVRAVPQDYLNVARVLRLSEFKVFTT 220 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +S+ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 221 ILFPSVLPHVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHII 274 Query: 243 YAMLTMLGVI 252 A+ + V Sbjct: 275 IAIFIVGLVG 284 >gi|149928370|ref|ZP_01916610.1| nitrate transport permease [Limnobacter sp. MED105] gi|149822905|gb|EDM82151.1| nitrate transport permease [Limnobacter sp. MED105] Length = 288 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 109/254 (42%), Gaps = 23/254 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH--------SLPQYA 65 ++ P + + +L+ I+ G + + I D + ++ + Sbjct: 36 KLVPPVVVMTILLLIWEILCS-TEGARLPAPSKVITDTWELIINPLYDNGGNDVGMAWQI 94 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ ++++ L +S L P+ +++++P L +L ++ F + Sbjct: 95 LASLERVAIGYSLAVVVGVALGVLVGQSTWALRGLDPLFQVLRTVPPLAWLPLSLAGFQD 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF IF + +W + + + NIP D VSR + +G + FW + + Sbjct: 155 GNP--------SAIFVIFITAIWPIIINTSVGIRNIPEDYRNVSRVIQHNGIEYFWKIML 206 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P + + + + W +VA+EM++ G GIG +I A + I+ A+ Sbjct: 207 PAAAPYIFSGLRIGVGLSWLAIVAAEMLIGGV------GIGFFIWDAWNSSLISDIVLAL 260 Query: 246 LTMLGVIFLYDQLL 259 + + V F+ D+ + Sbjct: 261 VYVGIVGFILDRCV 274 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 11/212 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W+ I + DV + W ++ RV + +A ++ + +G+ +G + Sbjct: 72 TWELIINPLYDNGGNDVG-MAWQILASLERVAIGYSLAVVVGVALGVLVGQSTWALRGLD 130 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL S + NP+ ++ W I+ N G P D+ Sbjct: 131 PLFQVLRTVPPLAWLPL--SLAGFQDGNPS--AIFVIFITAIWPIIINTSVGIRNIPEDY 186 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + V+ G ++ I+LP PY +G G +W A + +E+ G G+ Sbjct: 187 RNVSRVIQHNGIEYFWKIMLPAAAPYIFSGLRIGVGLSWLAIVAAEMLIGG------VGI 240 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 G +I ++ ++VL ++ + L+R Sbjct: 241 GFFIWDAWNSSLISDIVLALVYVGIVGFILDR 272 >gi|313200132|ref|YP_004038790.1| nitrate ABC transporter inner membrane subunit [Methylovorus sp. MP688] gi|312439448|gb|ADQ83554.1| nitrate ABC transporter, inner membrane subunit [Methylovorus sp. MP688] Length = 302 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 96/272 (35%), Gaps = 11/272 (4%) Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 ++ + +P + + + P F L + + Sbjct: 25 VKAAVQPAAARMAPSKRPSARALKLRAFFEWLLPPVFGVLAMIAVWTLISYQSPNLPGPV 84 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 A + + + D + W ++ RV + +A+++ IP+G IG + Sbjct: 85 STWHSAVELFSDPFYNNSPND-QGIGWNILASLERVGLGFGLAALVGIPLGFIIGRFQFM 143 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 S P +L + P+ + N ++ W ++ N G S Sbjct: 144 SRMAAPIIGILRPVSPLAWLPIGLLVFKAA----NPAAIWVIFISAIWPMIINTAVGVSK 199 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA +++ W+ I+ P + PY +TG + G AW + +E+ + G Sbjct: 200 VPQDYMNVAKVLNLSEWKIVTKILFPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG---- 255 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G+G ++ + + +++ + ++ Sbjct: 256 --VGIGFWVWDEWNNLNVEHIIIAIFVVGIVG 285 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 97/244 (39%), Gaps = 20/244 (8%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV------DIVPITLDVHSLPQYASRT 68 + P +F +LA + V +I+ + + + + + Sbjct: 56 LLPPVFGVLAMIAVWTLISYQSPNLPGPVSTWHSAVELFSDPFYNNSPNDQGIGWNILAS 115 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ ++ L + + + + + PI+ I++ + L +L ++ F P Sbjct: 116 LERVGLGFGLAALVGIPLGFIIGRFQFMSRMAAPIIGILRPVSPLAWLPIGLLVFKAANP 175 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 AAI+ IF S +W M + + +P+D V++ LS W+ + PF Sbjct: 176 --------AAIWVIFISAIWPMIINTAVGVSKVPQDYMNVAKVLNLSEWKIVTKILFPFV 227 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P ++ + +S+ W +VA+EM+ G GIG ++ ++ I+ A+ + Sbjct: 228 LPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHIIIAIFVV 281 Query: 249 LGVI 252 V Sbjct: 282 GIVG 285 >gi|75907097|ref|YP_321393.1| nitrate transport permease [Anabaena variabilis ATCC 29413] gi|75700822|gb|ABA20498.1| Nitrate transport permease [Anabaena variabilis ATCC 29413] Length = 283 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 L + WL ++ RV++ ++ +++ IP+G IG + P Q+ + P+ Sbjct: 82 LGIGWLLIASLRRVLIGFLLGAVVAIPLGFLIGMSRPAMLALNPIIQIFKPVSPLAWLPI 141 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ + + ++ + W + N G ++ P D+ +VA + WR Sbjct: 142 ALAIFNLADPS----AIFVIFITSLWPTIINTALGVASVPKDYLDVARVLEMPRWRRITK 197 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 II P PY TG + G AW + E+ + G G+G ++ + + + V Sbjct: 198 IIWPASLPYIFTGLRISLGIAWLVIVAVEMLTGG------IGIGFFVWDEWSRLNLSSVF 251 Query: 557 LGVLIMCCFVLALN 570 L V I+ L L+ Sbjct: 252 LAVFIIGLTGLILD 265 Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 102/262 (38%), Gaps = 23/262 (8%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------H 59 P + + L +L+ +I + H + T P +V + L+ Sbjct: 24 PILLRDVVILPALGFLGIILLWWVIALTNHELM-PTPPEALVANLDYILNPFYQRGPGNL 82 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+L ++ + L SR + L PI+ I + + L +L Sbjct: 83 GIGWLLIASLRRVLIGFLLGAVVAIPLGFLIGMSRPAMLALNPIIQIFKPVSPLAWLPIA 142 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F P +AIF IF + +W + + ++P+D +V+R + W++ Sbjct: 143 LAIFNLADP--------SAIFVIFITSLWPTIINTALGVASVPKDYLDVARVLEMPRWRR 194 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + P S+P + + +S+ W +VA EM+ G GIG ++ +L Sbjct: 195 ITKIIWPASLPYIFTGLRISLGIAWLVIVAVEMLTGGI------GIGFFVWDEWSRLNLS 248 Query: 240 AILYAMLTMLGVIFLYDQLLFR 261 ++ A+ + + D + + Sbjct: 249 SVFLAVFIIGLTGLILDFAVGK 270 >gi|207727822|ref|YP_002256216.1| nitrate transmembrane protein [Ralstonia solanacearum MolK2] gi|206591063|emb|CAQ56675.1| nitrate transmembrane protein [Ralstonia solanacearum MolK2] Length = 287 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 97/260 (37%), Gaps = 17/260 (6%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY--- 373 R ++ + + W + + + W++ + Y Sbjct: 26 PAWRDWLVAAVVKGFPPALGFALFVLAWQGITMAIPALPTPAVTWKAAVALFADPFYRNG 85 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + V W ++ RV +A+++ IP G +G +++ P LL + Sbjct: 86 PNDQGVGWNVLSSLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAW 145 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + N + + W ++ N G + P D+ VA +++ W+ Sbjct: 146 LPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKI 201 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + ++ P + PY +TG + G AW + +E+ + G G+G ++ + Sbjct: 202 FTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVE 255 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +V+ + ++ L L + L Sbjct: 256 HIVIAIFVIGVVGLLLEQAL 275 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 + FP FVL I + + + + V + + Sbjct: 38 KGFPPALGFALFVLAWQGITMAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 97 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 98 SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 157 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 158 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 209 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 210 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 263 Query: 248 MLGVIFLYDQLLF 260 + V L +Q L Sbjct: 264 IGVVGLLLEQALL 276 >gi|170742926|ref|YP_001771581.1| nitrate ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168197200|gb|ACA19147.1| nitrate ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 279 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 89/220 (40%), Gaps = 11/220 (5%) Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ + D I L ++ RV + ++A ++ +P+G IG P +S Sbjct: 62 VGATIWRHLRDPFYDRGPNDKGLGIQLAH-SVARVGLGYLLAVLVALPLGFLIGMSPLMS 120 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + PF Q+L + PL + + L+ ++ + W +L N G + Sbjct: 121 RALDPFIQVLKPVSPLAWMPLALYTIKDSGLS----AIFVIFICSLWPMLINTAFGVAGT 176 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 ++ VA + + R +ILP P +TG + G AW + +E+ G Sbjct: 177 RREWLNVARTLEVGPLRRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGG----- 231 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 TG+G ++ S V+ +L++ + L++ L Sbjct: 232 -TGIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 23/233 (9%) Query: 38 GIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88 G P D+ + L + L + + R+ ++++L Sbjct: 52 GRSAMPGPLDVGATIWRHLRDPFYDRGPNDKGLGIQLAHSVARVGLGYLLAVLVALPLGF 111 Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L S + L P + +++ + L ++ + + + L+AIF IF +W Sbjct: 112 LIGMSPLMSRALDPFIQVLKPVSPLAWMPLALY--------TIKDSGLSAIFVIFICSLW 163 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 M + + R+ V+R+ + ++ + + +P + P ++ M +S+ W +V Sbjct: 164 PMLINTAFGVAGTRREWLNVARTLEVGPLRRAFTVILPAAAPTILTGMRISIGIAWLVIV 223 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 A+EM+V G GIG ++ + ++ ++L + V + DQLL R Sbjct: 224 AAEMLVGGT------GIGYFVWNEWNNLSITNVITSILVIGLVGMVLDQLLAR 270 >gi|226940110|ref|YP_002795183.1| binding-protein-dependent transport systems inner membrane component [Laribacter hongkongensis HLHK9] gi|226715036|gb|ACO74174.1| binding-protein-dependent transport systems inner membrane component [Laribacter hongkongensis HLHK9] Length = 272 Score = 148 bits (373), Expect = 4e-33, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 18/247 (7%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--------G 383 L L + + + + A+ W + + + Y+ WL Sbjct: 17 LALVVWEACARAGLMSAVVLPAPSAVAAKWWASLLPMQPHDPAQMGYLAWLFSGEMIHDA 76 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +M+RVVV ++ + + +P+G+ +G P + + P Q+L P + PL + Sbjct: 77 ISSMYRVVVGFLVGAGLALPLGLVMGANPRLYALFNPLLQVLRPIPPIAYIPLAILWFGL 136 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 N L+ G + +L N IAG + + A + + W + +ILP Sbjct: 137 G----NPPSFFLISIGAFFPVLMNTIAGVNHVDGIYLRAARNLGVGSWTMFTRVILPAAT 192 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 PY + G G A+ IVSE+ + GLG I E+ E +++ G+L + Sbjct: 193 PYILAGVRIGIGTAFIVVIVSEMIA------VNDGLGFRILEAREFMWSDKIIAGMLTIG 246 Query: 564 CFVLALN 570 LA++ Sbjct: 247 LLGLAID 253 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 83/239 (34%), Gaps = 14/239 (5%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + + + L + A + R++ ++ Sbjct: 34 VVLPAPSAVAAKWWASLLPMQPHDPAQMGYLAWLFSGEMIHDAISSMYRVVVGFLVGAGL 93 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + + RL + P+L +++ IP + ++ +++F P + F I Sbjct: 94 ALPLGLVMGANPRLYALFNPLLQVLRPIPPIAYIPLAILWFGLGNPP--------SFFLI 145 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + + ++ +R+ + W F + +P + P ++ + + + Sbjct: 146 SIGAFFPVLMNTIAGVNHVDGIYLRAARNLGVGSWTMFTRVILPAATPYILAGVRIGIGT 205 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + V+ SEMI V D G+G I A + I+ MLT+ + D + R Sbjct: 206 AFIVVIVSEMIAVND------GLGFRILEAREFMWSDKIIAGMLTIGLLGLAIDTAISR 258 >gi|187927343|ref|YP_001897830.1| nitrate ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|187724233|gb|ACD25398.1| nitrate ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] Length = 283 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 98/267 (36%), Gaps = 17/267 (6%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVN 369 +R F ++ + + W + + + W++ + Sbjct: 15 AAPESRRFAVRDWFVAAVVRGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFA 74 Query: 370 HFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 Y + V W ++ RV +A++I IP G IG +++ P LL Sbjct: 75 DPFYRNGPNDQGVGWNVLASLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLR 134 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 + P+ + + N + + W ++ N G + P D+ VA Sbjct: 135 PVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVL 190 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 +++ W+ + ++ P + PY +TG + G AW + +E+ + G G+G ++ + Sbjct: 191 NLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDE 244 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573 +V+ + ++ L L L Sbjct: 245 WNNLKVEHIVIAIFVIGVVGLLLEHAL 271 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 R FP + L+ FVL I + + + V + + Sbjct: 34 RGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLA 93 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 94 SLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPA 205 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259 Query: 248 MLGVIFLYDQLLF 260 + V L + L Sbjct: 260 IGVVGLLLEHALL 272 >gi|229544994|ref|ZP_04433719.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis TX1322] gi|229309886|gb|EEN75873.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis TX1322] Length = 569 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|260460414|ref|ZP_05808666.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gi|259034059|gb|EEW35318.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 659 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 83/530 (15%), Positives = 164/530 (30%), Gaps = 51/530 (9%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYF 123 A T + A+ ++ A + ++ P LD+MQ+IP +L ++ F Sbjct: 148 AMLTLALISIAVPFCIVTGLFAGIWAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLF 207 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 N + ++A+ A M + L +P ++++ S + QK W + Sbjct: 208 GN--------SPVSAMIATAIFATPPMVRATMLGLSRVPSEIDDFSEMAGCTARQKLWRV 259 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P + P L+ + + V+ + MI G G+G + LA++ + + Sbjct: 260 LLPSARPTLMVGVNQVIMLALNMVIIASMIGAG-------GLGYDVLLALRALKVGEAME 312 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 A L ++ + D+L ++K W Y + Sbjct: 313 AGLAIVALAIALDRLS----QAIAHKQAKGNIHQQAGPSFWRRYPNLTLAIAILAVTTLI 368 Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQL-----CSNQRVSYMLDI----------FW 348 F P V K + N++ + RV+ +L++ F Sbjct: 369 GLFVPAFAAVPKAITFTTAPLWKAAVNWVTINFFDTIEAFRVALILNVLNPVRAFCEGFP 428 Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIP 403 + + +Q G + + G T++ + IA +I IP Sbjct: 429 WLGAVLLLGLAGYQLSGLRLAALVAALTAFCAVTGLWEKTMATVYLCGISAFIACLIGIP 488 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G+ + P L P+ F VV + + + Y Sbjct: 489 IGLMAARSDRFEKIVTPVIDTLQVLPSFCFIIPVVMLFRVGDVTAMIATIAFAVVPAIRY 548 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 G P E A T + + + LP P + G A I+ Sbjct: 549 ----TNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIMLGVNQTILMALAMIII 604 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + LG + + K ++ L + + +R Sbjct: 605 CAMVGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGIVADRLF 647 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 83/214 (38%), Gaps = 19/214 (8%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 V L + T + I+ L +AA+S R ++ P++D +Q +P F+ Sbjct: 461 VTGLWEKTMATVYLCGISAFIACLIGIPIGLMAARSDRFEKIVTPVIDTLQVLPSFCFII 520 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 V+ F ++ A+ A V + +P L E ++ + Sbjct: 521 PVVMLFRVG--------DVTAMIATIAFAVVPAIRYTNHGIRQVPPALIEAAKVSGCTPR 572 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 Q F+ + +P ++P ++ + ++ ++ M+ D +G + +A+ + D Sbjct: 573 QTFFRVQLPLALPEIMLGVNQTILMALAMIIICAMVGTRD-------LGQEVFIALSKAD 625 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + A L + + + D+L W+ K R Sbjct: 626 SGRGIVAGLAIAFIGIVADRL----FNAWTAKAR 655 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 84/287 (29%), Gaps = 23/287 (8%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVI---RFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 + + +N+ L R++ + F N L + + G Sbjct: 52 VADWVSALMRWIKSNLSWLTRSITAVLGVPLDFALNLLAKSFKIGHGADVSVLPRLSWIG 111 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF---- 410 V +++ + +L + I +P I G Sbjct: 112 VCAAAFIAGHAAGGRKLGLLVGGCFLYIALFGQWTSAMLTLALISIAVPFCIVTGLFAGI 171 Query: 411 ----RPHISSKI-QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 +P I P L+ P + ++ ++ + ++ ++ Sbjct: 172 WAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIATAIF----ATPPMV 227 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 + G S P++ + + T + ++LP P + G A N I++ Sbjct: 228 RATMLGLSRVPSEIDDFSEMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIAS 287 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + + E + L + +AL+R Sbjct: 288 MIGAG-------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 327 >gi|241661876|ref|YP_002980236.1| nitrate ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240863903|gb|ACS61564.1| nitrate ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 283 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 97/257 (37%), Gaps = 17/257 (6%) Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY---QDV 376 R F ++ + + W + + + W++ + Y + Sbjct: 25 RDWFVAAVVRGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFADPFYRNGPND 84 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V W ++ RV +A++I IP G IG +++ P LL + P+ Sbjct: 85 QGVGWNVLASLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLPI 144 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + N + + W ++ N G + P D+ VA +++ W+ + Sbjct: 145 GLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTR 200 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++ P + PY +TG + G AW + +E+ + G G+G ++ + +V Sbjct: 201 VLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVEHIV 254 Query: 557 LGVLIMCCFVLALNRFL 573 + + ++ L L L Sbjct: 255 IAIFVIGVVGLLLEHAL 271 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 R FP + L+ FVL I + + + V + + Sbjct: 34 RGFPPVLGLVLFVLAWQGIATAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLA 93 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 94 SLARVGAGFGMAAVIGIPAGFLIGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPA 205 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259 Query: 248 MLGVIFLYDQLLF 260 + V L + L Sbjct: 260 IGVVGLLLEHALL 272 >gi|257416825|ref|ZP_05593819.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis AR01/DG] gi|257158653|gb|EEU88613.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis ARO1/DG] Length = 569 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|29377126|ref|NP_816280.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecalis V583] gi|227554134|ref|ZP_03984181.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|229549238|ref|ZP_04437963.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis ATCC 29200] gi|255971952|ref|ZP_05422538.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T1] gi|255975006|ref|ZP_05425592.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T2] gi|256616850|ref|ZP_05473696.1| OpuABC [Enterococcus faecalis ATCC 4200] gi|256763274|ref|ZP_05503854.1| OpuABC [Enterococcus faecalis T3] gi|256957876|ref|ZP_05562047.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis DS5] gi|256961126|ref|ZP_05565297.1| OpuABC [Enterococcus faecalis Merz96] gi|257079813|ref|ZP_05574174.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis JH1] gi|257081841|ref|ZP_05576202.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis E1Sol] gi|257087618|ref|ZP_05581979.1| ABC transporter permease [Enterococcus faecalis D6] gi|257090777|ref|ZP_05585138.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis CH188] gi|257420040|ref|ZP_05597034.1| ABC betaine transporter permease and substrate binding protein [Enterococcus faecalis T11] gi|257421781|ref|ZP_05598771.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis X98] gi|293384072|ref|ZP_06629966.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Enterococcus faecalis R712] gi|293386886|ref|ZP_06631456.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Enterococcus faecalis S613] gi|294781364|ref|ZP_06746706.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis PC1.1] gi|300860960|ref|ZP_07107047.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis TUSoD Ef11] gi|307270648|ref|ZP_07551939.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX4248] gi|307276884|ref|ZP_07557995.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX2134] gi|307285514|ref|ZP_07565653.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0860] gi|307287539|ref|ZP_07567582.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0109] gi|312902408|ref|ZP_07761614.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0635] gi|312907977|ref|ZP_07766960.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis DAPTO 512] gi|312953668|ref|ZP_07772505.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0102] gi|312978495|ref|ZP_07790233.1| ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein [Enterococcus faecalis DAPTO 516] gi|29344592|gb|AAO82350.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecalis V583] gi|227176760|gb|EEI57732.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|229305475|gb|EEN71471.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis ATCC 29200] gi|255962970|gb|EET95446.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T1] gi|255967878|gb|EET98500.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T2] gi|256596377|gb|EEU15553.1| OpuABC [Enterococcus faecalis ATCC 4200] gi|256684525|gb|EEU24220.1| OpuABC [Enterococcus faecalis T3] gi|256948372|gb|EEU65004.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis DS5] gi|256951622|gb|EEU68254.1| OpuABC [Enterococcus faecalis Merz96] gi|256987843|gb|EEU75145.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis JH1] gi|256989871|gb|EEU77173.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis E1Sol] gi|256995648|gb|EEU82950.1| ABC transporter permease [Enterococcus faecalis D6] gi|256999589|gb|EEU86109.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis CH188] gi|257161868|gb|EEU91828.1| ABC betaine transporter permease and substrate binding protein [Enterococcus faecalis T11] gi|257163605|gb|EEU93565.1| ABC glycine betaine/L-proline transporter [Enterococcus faecalis X98] gi|291078552|gb|EFE15916.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Enterococcus faecalis R712] gi|291083720|gb|EFE20683.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Enterococcus faecalis S613] gi|294451491|gb|EFG19951.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis PC1.1] gi|295113609|emb|CBL32246.1| ABC-type proline/glycine betaine transport system, permease component [Enterococcus sp. 7L76] gi|300849999|gb|EFK77749.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis TUSoD Ef11] gi|306501277|gb|EFM70580.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0109] gi|306502738|gb|EFM72003.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0860] gi|306506521|gb|EFM75680.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX2134] gi|306512958|gb|EFM81599.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX4248] gi|310626068|gb|EFQ09351.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis DAPTO 512] gi|310628506|gb|EFQ11789.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0102] gi|310634078|gb|EFQ17361.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0635] gi|311288644|gb|EFQ67200.1| ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein [Enterococcus faecalis DAPTO 516] gi|315025224|gb|EFT37156.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX2137] gi|315032769|gb|EFT44701.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0017] gi|315035772|gb|EFT47704.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0027] gi|315143732|gb|EFT87748.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX2141] gi|315151935|gb|EFT95951.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0031] gi|315155518|gb|EFT99534.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0043] gi|315159185|gb|EFU03202.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0312] gi|315162244|gb|EFU06261.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0645] gi|315164936|gb|EFU08953.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX1302] gi|315168629|gb|EFU12646.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX1341] gi|315170114|gb|EFU14131.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX1342] gi|315173750|gb|EFU17767.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX1346] gi|315576241|gb|EFU88432.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0309B] gi|315579182|gb|EFU91373.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0630] gi|315582957|gb|EFU95148.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0309A] gi|323481572|gb|ADX81011.1| betaine ABC transporter permease and substrate binding protein [Enterococcus faecalis 62] gi|327535867|gb|AEA94701.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter [Enterococcus faecalis OG1RF] gi|329577362|gb|EGG58818.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecalis TX1467] Length = 569 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|312900011|ref|ZP_07759329.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0470] gi|311293007|gb|EFQ71563.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0470] Length = 569 Score = 147 bits (372), Expect = 5e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|257084383|ref|ZP_05578744.1| amino acid ABC transporter, permease [Enterococcus faecalis Fly1] gi|256992413|gb|EEU79715.1| amino acid ABC transporter, permease [Enterococcus faecalis Fly1] Length = 569 Score = 147 bits (372), Expect = 5e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|256963755|ref|ZP_05567926.1| OpuABC [Enterococcus faecalis HIP11704] gi|307271702|ref|ZP_07552973.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0855] gi|256954251|gb|EEU70883.1| OpuABC [Enterococcus faecalis HIP11704] gi|306511580|gb|EFM80579.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0855] Length = 569 Score = 147 bits (372), Expect = 5e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.2 bits (233), Expect = 6e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSIMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|256853947|ref|ZP_05559312.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T8] gi|307290350|ref|ZP_07570265.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0411] gi|256710890|gb|EEU25933.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis T8] gi|306498543|gb|EFM68045.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0411] gi|315030307|gb|EFT42239.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX4000] Length = 569 Score = 147 bits (372), Expect = 5e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|329905904|ref|ZP_08274285.1| Nitrate ABC transporter, permease protein [Oxalobacteraceae bacterium IMCC9480] gi|327547435|gb|EGF32258.1| Nitrate ABC transporter, permease protein [Oxalobacteraceae bacterium IMCC9480] Length = 307 Score = 147 bits (372), Expect = 5e-33, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 10/173 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+++ IP+G IG +S P LL + P+ + Sbjct: 109 IGWNILASLKRVGMGFGLAAVVGIPLGFAIGRFKFMSGMFGPIISLLKPVSPLAWLPIGL 168 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 169 LVFKAA----DPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKIL 224 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 P + PY +TG A G AW + +E+ + G G+G ++ + + Sbjct: 225 FPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLN 271 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 90/221 (40%), Gaps = 18/221 (8%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R+ ++ + + + + + PI+ +++ + L +L Sbjct: 105 NDQGIGWNILASLKRVGMGFGLAAVVGIPLGFAIGRFKFMSGMFGPIISLLKPVSPLAWL 164 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P AAI++IF +W M + + +P+D V+R LS Sbjct: 165 PIGLLVFKAADP--------AAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSE 216 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W+ + P +P ++ + +++ W +VA+EM+ G GIG ++ Sbjct: 217 WKVLTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNL 270 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG 277 ++ I+ A++ + V + +Q ++ + F E Sbjct: 271 NVPHIIIAIVVIGVVGLILEQA----LVALARAFTYEDAGS 307 >gi|207742226|ref|YP_002258618.1| nitrate transmembrane protein [Ralstonia solanacearum IPO1609] gi|206593614|emb|CAQ60541.1| nitrate transmembrane protein [Ralstonia solanacearum IPO1609] Length = 287 Score = 147 bits (372), Expect = 5e-33, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 97/262 (37%), Gaps = 17/262 (6%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY- 373 R ++ + + W + + + W++ + Y Sbjct: 24 ARPAWRDWLVAAVVKGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYR 83 Query: 374 --QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + V W ++ RV +A+++ IP G +G +++ P LL Sbjct: 84 NGPNDQGVGWNVLSSLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPL 143 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + P+ + + N + + W ++ N G + P D+ VA +++ W Sbjct: 144 AWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEW 199 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + + ++ P + PY +TG + G AW + +E+ + G G+G ++ + Sbjct: 200 KIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLK 253 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 +V+ + ++ L L + L Sbjct: 254 VEHIVIAIFVIGVVGLLLEQAL 275 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 + FP FVL I + + + + V + + Sbjct: 38 KGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 97 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 98 SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 157 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 158 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 209 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 210 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 263 Query: 248 MLGVIFLYDQLLF 260 + V L +Q L Sbjct: 264 IGVVGLLLEQALL 276 >gi|315149978|gb|EFT93994.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX0012] Length = 569 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.2 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|315148611|gb|EFT92627.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecalis TX4244] Length = 569 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 94.2 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|83590806|ref|YP_430815.1| binding-protein dependent transport system inner membrane protein [Moorella thermoacetica ATCC 39073] gi|83573720|gb|ABC20272.1| Binding-protein-dependent transport systems inner membrane component [Moorella thermoacetica ATCC 39073] Length = 261 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++FR ++A+++ IP+G+ +G+ + + P Q+L + PLV Sbjct: 59 AVSLFRFFSGYLVAAVVAIPLGLLLGWSRRLWIAVDPLVQVLRPISPIAWLPLVTLWFGI 118 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L +++ + + IL IA + +VA +F +G +I+P F Sbjct: 119 GDL----PAIVIIFMASFYPILLGTIAAVKNVDPVYIKVAKNFGASGSHILWRVIVPAAF 174 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 PY G A G AW + E+ +GLG I ++ V+ G+L++ Sbjct: 175 PYITMGLHFALGTAWIFLVAGEMMG------VRSGLGFLIIDARNSMDTGLVIAGMLVIG 228 Query: 564 CFVLALNRFL 573 LA++R Sbjct: 229 LLGLAIDRLF 238 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 101/247 (40%), Gaps = 15/247 (6%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRM 72 R F ++ L + + + + P D++ + L L ++ + + R Sbjct: 6 RFFLSLAGLAGALTLWQVFAWTGLYPRYLFPWPGDVLQSLSQQLHQGVLGEHIAVSLFRF 65 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 S +++ + L SRRL + + P++ +++ I + +L ++F Sbjct: 66 FSGYLVAAVVAIPLGLLLGWSRRLWIAVDPLVQVLRPISPIAWLPLVTLWFGIG------ 119 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 +L AI IF + + + ++ N+ +V+++F SG W + VP + P + Sbjct: 120 --DLPAIVIIFMASFYPILLGTIAAVKNVDPVYIKVAKNFGASGSHILWRVIVPAAFPYI 177 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + ++ W F+VA EM+ V G+G I A D ++ ML + + Sbjct: 178 TMGLHFALGTAWIFLVAGEMMGV------RSGLGFLIIDARNSMDTGLVIAGMLVIGLLG 231 Query: 253 FLYDQLL 259 D+L Sbjct: 232 LAIDRLF 238 >gi|71906470|ref|YP_284057.1| nitrate transport permease [Dechloromonas aromatica RCB] gi|71846091|gb|AAZ45587.1| Nitrate transport permease [Dechloromonas aromatica RCB] Length = 312 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 98/255 (38%), Gaps = 20/255 (7%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQY 64 R I P + ++ + + I + I D ++ + + Sbjct: 60 FGRAILPPVLGMVVLIGIWFIATMKGGSIPGPLQTWDAATVLFADPFYRNGPNDQGIGWN 119 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ + L + +S L ++ PI+ +++ + L +L ++ F Sbjct: 120 VLSSLQRVGIGFGFAALVGIPLGFILGRSAFLSAMINPIISLLRPVSPLAWLPIGLLVFK 179 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 P AA + IF +W M + Q + +P+D V+R LS W+ + Sbjct: 180 KADP--------AATYTIFICSIWPMIMNTAQGVQRVPQDYLNVARVLALSEWKVVTKIL 231 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 P +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A Sbjct: 232 FPAVLPYMLTGIRLSIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLKVEHIIIA 285 Query: 245 MLTMLGVIFLYDQLL 259 + + V + +Q L Sbjct: 286 IFVIGIVGLILEQAL 300 Score = 146 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 86/217 (39%), Gaps = 13/217 (5%) Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 W + + Y + + W ++ RV + A+++ IP+G +G +S+ Sbjct: 94 TWDAATVLFADPFYRNGPNDQGIGWNVLSSLQRVGIGFGFAALVGIPLGFILGRSAFLSA 153 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 I P LL + P+ + + + + + W ++ N G P Sbjct: 154 MINPIISLLRPVSPLAWLPIGLLVFK----KADPAATYTIFICSIWPMIMNTAQGVQRVP 209 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D+ VA ++ W+ I+ P + PY +TG + G AW + +E+ + G Sbjct: 210 QDYLNVARVLALSEWKVVTKILFPAVLPYMLTGIRLSIGTAWLVIVAAEMLTGG------ 263 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G ++ + +++ + ++ L L + L Sbjct: 264 VGIGFWVWDEWNNLKVEHIIIAIFVIGIVGLILEQAL 300 >gi|218672619|ref|ZP_03522288.1| nitrate ABC transporter, permease protein [Rhizobium etli GR56] Length = 246 Score = 147 bits (371), Expect = 6e-33, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + + + +S L PI +++++P L +L + Sbjct: 47 GLGWRVLVSLQRVAYGFGLAAVTGIIIGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLS 106 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V+ RL+ ++ Sbjct: 107 LAAFQDSNP--------SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAEVLRLNQFEF 158 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 159 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLS 212 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A+ + V F+ D+L+ Sbjct: 213 DIIVALAYIGIVGFVLDKLV 232 Score = 146 bits (369), Expect = 9e-33, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 11/214 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 ++ I Y ++ QD+ + W +++ RV +A++ I +G IG + Sbjct: 30 SYDLIAYPFFNYGSQDIG-LGWRVLVSLQRVAYGFGLAAVTGIIIGAIIGQSVWAMRGLD 88 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P Q+L P + PL ++ + N ++ + W ++ N G P D+ Sbjct: 89 PIFQVLRTVPPLAWLPLSLAAFQ----DSNPSAIFVIFITSIWPVIINTAVGVRNIPQDY 144 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + VA + + ++ I+LP PY TG G +W A + +E+ + G G+ Sbjct: 145 RNVAEVLRLNQFEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGI 198 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +I ++ ++++ + + L++ + Sbjct: 199 GFFIWDAWNSSRLSDIIVALAYIGIVGFVLDKLV 232 >gi|323694649|ref|ZP_08108813.1| ABC transporter permease [Clostridium symbiosum WAL-14673] gi|323501289|gb|EGB17187.1| ABC transporter permease [Clostridium symbiosum WAL-14673] Length = 613 Score = 146 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 15/244 (6%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + I +L+ + L+I I+ + + I I+ + L T +L+ Sbjct: 369 VLNAILNLIPWWLLIAIVFFGGYKLSGKVRNGIIYSILLFLVGAIGLWDLMYETLSIVLA 428 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 ++VISLL + + S R +++ PILD MQ++P+ +L V++F VI Sbjct: 429 SVVISLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIAT 488 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 + AI + + + ++ E +RSF + WQ + + +P ++P ++ Sbjct: 489 TIYAIVPVIRL--------TSHGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQALPTILT 540 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++ VV MI G+G + +++ ++ L A ++ V L Sbjct: 541 GVNQTLMMAMAMVVTCSMI-------GASGLGMEVLISVNRIEIGRGLLAGTAVVIVAIL 593 Query: 255 YDQL 258 D+L Sbjct: 594 MDRL 597 Score = 103 bits (257), Expect = 9e-20, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 17/236 (7%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLIII 396 +L++ + ++ + ++ G + N Y +L+++ L T+ V+ ++I Sbjct: 373 ILNLIPWWLLIAIVFFGGYKLSGKVRNGIIYSILLFLVGAIGLWDLMYETLSIVLASVVI 432 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 + +I +PVGI I + ++P + P V+ V + ++ Sbjct: 433 SLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIATTIYA 492 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 I ++ G + E A SF T W+ + +P P +TG Sbjct: 493 IV----PVIRLTSHGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQALPTILTGVNQTLMM 548 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A + + +GLG + S + +L + + ++R Sbjct: 549 AMAMVVTCSMIG-------ASGLGMEVLISVNRIEIGRGLLAGTAVVIVAILMDRL 597 >gi|170076486|ref|YP_001733125.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Synechococcus sp. PCC 7002] gi|169887348|gb|ACB01056.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Synechococcus sp. PCC 7002] Length = 279 Score = 146 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 10/182 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV++ I+ +++ IPVGIWIG + I P Q+L V+ P+ +S Sbjct: 91 RVIIGFILGALVAIPVGIWIGLSRNAWLAINPIIQILKPVSPLVWLPIALSIF----NGA 146 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 ++ + W + N G + P D+ EVA + W+ +ILP PY T Sbjct: 147 EPSAIFVIFITSLWSTIINTAEGVAQVPRDYLEVARMLEMPRWKQLWRVILPASLPYIFT 206 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G + G AW + E+ + G G+G ++ + + + V L V ++ L Sbjct: 207 GLRISMGVAWLVIVAVEMLTGG------IGIGFFVWDEWNRLNVSSVFLAVFVIGITGLI 260 Query: 569 LN 570 L+ Sbjct: 261 LD 262 Score = 143 bits (362), Expect = 7e-32, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 14/189 (7%) Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ ++ L SR + + PI+ I++ + L +L + F Sbjct: 91 RVIIGFILGALVAIPVGIWIGLSRNAWLAINPIIQILKPVSPLVWLPIALSIFN------ 144 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 GAE +AIF IF + +W+ + + + +PRD EV+R + W++ W + +P S+P Sbjct: 145 --GAEPSAIFVIFITSLWSTIINTAEGVAQVPRDYLEVARMLEMPRWKQLWRVILPASLP 202 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 + + +SM W +VA EM+ G GIG ++ ++ ++ A+ + Sbjct: 203 YIFTGLRISMGVAWLVIVAVEMLTGGI------GIGFFVWDEWNRLNVSSVFLAVFVIGI 256 Query: 251 VIFLYDQLL 259 + D L Sbjct: 257 TGLILDSAL 265 >gi|2642138|gb|AAB86903.1| nitrate transporter component [Klebsiella oxytoca] Length = 294 Score = 146 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV V +A++ IP+G IG + P LL + Sbjct: 93 PNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAW 152 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 153 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPEDYLNVARVLQLSEWTV 208 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNV 261 Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 72/179 (40%), Gaps = 14/179 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L L +S + P++ +++ + L +L Sbjct: 97 GIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAWLPIG 156 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P A+ + IF +W M + + + IP D V+R +LS W Sbjct: 157 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPEDYLNVARVLQLSEWTV 208 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + P +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNV 261 >gi|323487142|ref|ZP_08092449.1| ABC transporter permease [Clostridium symbiosum WAL-14163] gi|323399545|gb|EGA91936.1| ABC transporter permease [Clostridium symbiosum WAL-14163] Length = 625 Score = 146 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 15/244 (6%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + I +L+ + L+I I+ + + I I+ + L T +L+ Sbjct: 381 VLNAILNLIPWWLLIAIVFFGGYKLSGKVRNGIIYSILLFLVGAIGLWDLMYETLSIVLA 440 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 ++VISLL + + S R +++ PILD MQ++P+ +L V++F VI Sbjct: 441 SVVISLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIAT 500 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 + AI + + + ++ E +RSF + WQ + + +P ++P ++ Sbjct: 501 TIYAIVPVIRL--------TSHGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQALPTILT 552 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++ VV MI G+G + +++ ++ L A ++ V L Sbjct: 553 GVNQTLMMAMAMVVTCSMI-------GASGLGMEVLISVNRIEIGRGLLAGTAVVIVAIL 605 Query: 255 YDQL 258 D+L Sbjct: 606 MDRL 609 Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 17/236 (7%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLIII 396 +L++ + ++ + ++ G + N Y +L+++ L T+ V+ ++I Sbjct: 385 ILNLIPWWLLIAIVFFGGYKLSGKVRNGIIYSILLFLVGAIGLWDLMYETLSIVLASVVI 444 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 + +I +PVGI I + ++P + P V+ V + ++ Sbjct: 445 SLLIGLPVGIMISGSDRANVIVRPILDTMQTMPVFVYLIPAVLFFGLGKAPAVIATTIYA 504 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 I ++ G + E A SF T W+ + +P P +TG Sbjct: 505 IV----PVIRLTSHGIRQVDPEVVEAARSFGSTKWQCLFKVQIPQALPTILTGVNQTLMM 560 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A + + +GLG + S + +L + + ++R Sbjct: 561 AMAMVVTCSMIG-------ASGLGMEVLISVNRIEIGRGLLAGTAVVIVAILMDRL 609 >gi|209552027|ref|YP_002283943.1| binding-protein-dependent transporters inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539620|gb|ACI59551.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 660 Score = 146 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 97/568 (17%), Positives = 197/568 (34%), Gaps = 50/568 (8%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 + +LV ++ + G + L V L A T +L Sbjct: 108 LAPPLSWVGVILVTALVAWRISGRSLAILTLAAG----AYLVVFGLWVSAMITLASVLLC 163 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 ++ L A +S L +++IMQ++PI +L T++ F Sbjct: 164 VITGLALGLAMGIWAYRSPGAEAGLRAVMNIMQTVPIFSYLLPTLLLFGYG--------P 215 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 AA+FA + M + +L ++P + E++R S Q W + +P +MP L Sbjct: 216 SAALFATVVYALPPMVHATVLALRSVPSETLELARMTGCSRTQTLWKVELPVAMPQLAIG 275 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + + V+ + MI G G+G + A++ D A A + ++ + + Sbjct: 276 LNQVVMMTLNMVIIASMIGAG-------GLGYDVLRALRRLDFGAGFEAGMGIVALAVVL 328 Query: 256 DQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL----------FRKTNFLRFIGYSSWNF 305 D+L + + + ++ +L L F + + Sbjct: 329 DRL-----TQAAARNQSTGRHRLWRPRDSILALSLLVVPTVVSFAVPALAAWPTGWTLTT 383 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI----AW 361 + V + +T L N + W VV +A+ Sbjct: 384 APFWNGAVSFINQTFYGPLEAMRTAMLLGVMNPFRDLLQSAPWSVVVLLLAMTAYALGGL 443 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 ++ ++ + V +++ V+ + IA I +P+GIW+ P + +Q Sbjct: 444 RTTAVVMLLILFIVVTGYWEAAMASVYLTVLSVAIALAIGLPLGIWVAGHPRLHGPVQLA 503 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 L P V+ V + + ++ I Y +AG + P++ E Sbjct: 504 LDTLQTLPTLVYLLPAVMLFRNGDFSALIAIASYAIAPAVRY----GMAGMAHVPHERIE 559 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 T W+ +R+I LP P + G A + +++ + LG Sbjct: 560 AGLMSGCTPWQTFRFISLPSALPTLILGVNQTVMMALSMLVIAALVGTRE-------LGQ 612 Query: 542 YIAESTEKGSF-PEVVLGVLIMCCFVLA 568 + + +G P ++ G+ + C ++A Sbjct: 613 EVYTALARGQTGPGIIAGLCVACIALIA 640 Score = 66.1 bits (160), Expect = 2e-08, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 86/288 (29%), Gaps = 16/288 (5%) Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349 R N+ + + + + + + + ++ + Sbjct: 55 RAMNWFARDAAIGQVKIADATRALAAVAEMPILWLKMLLVDGWVKGAGFNKVHLAPPLSW 114 Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWI 408 V V +AW+ G + T Y++ G ++ + +++ I + +G+ + Sbjct: 115 VGVILVTALVAWRISGRSLAILTLAAGAYLVVFGLWVSAMITLASVLLCVITGLALGLAM 174 Query: 409 G----FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 G P + ++ ++ P + + Y + + Sbjct: 175 GIWAYRSPGAEAGLRAVMNIMQTVPIFSYLLPTLLLFGYGPS----AALFATVVYALPPM 230 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + + + P++ E+A + + + LP P G N I++ Sbjct: 231 VHATVLALRSVPSETLELARMTGCSRTQTLWKVELPVAMPQLAIGLNQVVMMTLNMVIIA 290 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + + + F + + + L+R Sbjct: 291 SMIGAG-------GLGYDVLRALRRLDFGAGFEAGMGIVALAVVLDRL 331 >gi|89901332|ref|YP_523803.1| nitrate transport permease [Rhodoferax ferrireducens T118] gi|89346069|gb|ABD70272.1| nitrate transport permease [Rhodoferax ferrireducens T118] Length = 314 Score = 146 bits (370), Expect = 7e-33, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 95/261 (36%), Gaps = 18/261 (6%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY-- 378 + + +L + ++ W V A I S + + D Y Sbjct: 50 SAPPYDWRGLWLAVLPPVLGLALMIGVWALVSISTASSIPSPSETFKQAVIIFSDPFYRK 109 Query: 379 ------VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 V W +++ RV V +A+ + IP G IG +S P LL Sbjct: 110 GPNDQGVGWNILMSLQRVAVGFGLAAAVGIPAGFMIGRFEFLSRMFNPLIGLLRPVSPLA 169 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + P+ + N + + W ++ N G P D+ VA +++ W+ Sbjct: 170 WLPIGLLVFK----GANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWK 225 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 I+ P + PY +TG A G AW + +E+ + G G+G ++ + + Sbjct: 226 IVTKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNV 279 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 +++ + ++ L L L Sbjct: 280 KNIIIAIFVIGIVGLMLEYAL 300 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 97/262 (37%), Gaps = 25/262 (9%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---------HSLPQYA 65 + P + L + V +++I P + I + Sbjct: 63 VLPPVLGLALMIGVWALVSIST--ASSIPSPSETFKQAVIIFSDPFYRKGPNDQGVGWNI 120 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+ ++ + + L + P++ +++ + L +L ++ F Sbjct: 121 LMSLQRVAVGFGLAAAVGIPAGFMIGRFEFLSRMFNPLIGLLRPVSPLAWLPIGLLVFKG 180 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P AAI+ IF +W M + + +P+D V+R LS W+ + Sbjct: 181 ANP--------AAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKILF 232 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ A+ Sbjct: 233 PSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNIIIAI 286 Query: 246 LTMLGVIFLYDQLLFRPMIVWS 267 + V + + L + ++ Sbjct: 287 FVIGIVGLMLEYALIKIATAFT 308 >gi|157371148|ref|YP_001479137.1| nitrate ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322912|gb|ABV42009.1| nitrate ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 298 Score = 146 bits (369), Expect = 8e-33, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 89/275 (32%), Gaps = 17/275 (6%) Query: 285 VLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344 + L + PL V L + + F + + Sbjct: 1 MKNLAERIYIPASSRAEVSAEIVPLKRPVMPLPQRKARWGLLLQQGFRRGVPAALGLVLT 60 Query: 345 DIFWFCVVCGV----AIGIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIA 397 + W WQ+ + Y + + W ++ RV +A Sbjct: 61 LVVWQVAALNSKGFPTPWATWQAALVLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLA 120 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +++ IP G +G +++ + P LL + P+ + + Sbjct: 121 ALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASTWT----IF 176 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 + W ++ N G + P D+ VA ++ W R I+ P + PY +TG + G A Sbjct: 177 ICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIA 236 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 W + +E+ + G G+G +I + Sbjct: 237 WLVIVAAEMLTGG------VGIGFWIWNEWNNLNV 265 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 88/232 (37%), Gaps = 20/232 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 RR P L+ ++V + + + + + + Sbjct: 48 RRGVPAALGLVLTLVVWQVAALNSKGFPTPWATWQAALVLFADPFYSAGPNDQGIGWNVL 107 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ + ++ L L + L +L PI+ +++ + L +L ++ F Sbjct: 108 ASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRA 167 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P A+ + IF +W M + + + IP+D V+R +LS W + P Sbjct: 168 EP--------ASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFP 219 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 220 AVLPYVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNV 265 >gi|17545099|ref|NP_518501.1| nitrate transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427389|emb|CAD13908.1| putative nitrate transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 287 Score = 146 bits (369), Expect = 9e-33, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 97/260 (37%), Gaps = 17/260 (6%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY--- 373 R ++ + + W + + + W++ + Y Sbjct: 26 PAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAIPALPTPALTWKAAVALFADPFYRNG 85 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + V W ++ RV +A++I IP G +G +++ P LL + Sbjct: 86 PNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAW 145 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + N + + W ++ N G + P D+ VA +++ W+ Sbjct: 146 LPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKI 201 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + ++ P + PY +TG + G AW + +E+ + G G+G ++ + Sbjct: 202 FTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLKVE 255 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +V+ + ++ L L + L Sbjct: 256 HIVIAIFVIGVVGLLLEQAL 275 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 100/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 + FP + FVL I + + + + V + + Sbjct: 38 KGFPPMLGFALFVLAWQGIAMAIPALPTPALTWKAAVALFADPFYRNGPNDQGVGWNVLS 97 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 98 SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 157 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 158 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 209 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 210 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 263 Query: 248 MLGVIFLYDQLLF 260 + V L +Q L Sbjct: 264 IGVVGLLLEQALL 276 >gi|218248421|ref|YP_002373792.1| nitrate ABC transporter inner membrane subunit [Cyanothece sp. PCC 8801] gi|257061488|ref|YP_003139376.1| nitrate ABC transporter inner membrane protein [Cyanothece sp. PCC 8802] gi|218168899|gb|ACK67636.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8801] gi|256591654|gb|ACV02541.1| nitrate ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8802] Length = 280 Score = 146 bits (369), Expect = 9e-33, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 12/234 (5%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWLGCITMFRVVVLIIIASI 399 + + + + + ++ YI++ F L + WL ++ RV + ++ + Sbjct: 40 WWIIALFRHEMMPTPLEALTKNWDYILHPFYVRGPGDLGIGWLLLASLRRVSIGFLLGAA 99 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVG+ IG I P Q+L + P+ ++ + + ++ Sbjct: 100 VAIPVGLLIGMSRTAMLMINPIIQVLKPVSPLAWLPIALAMFNLAEPS----AIFVIFIT 155 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + W + N G ++ P D+ EV+ + R IILP PY TG + G AW Sbjct: 156 SLWSTIINTALGVASVPRDYLEVSQVLEMNHRRRIWKIILPASLPYIFTGLRISLGIAWL 215 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + E+ + G G+G ++ + + + V L VL++ L L+ L Sbjct: 216 VIVAVEMLTGG------IGIGFFVWDEWNRLNVSSVFLAVLVIGLTGLVLDYIL 263 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 87/200 (43%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L SR +++ PI+ +++ + L +L Sbjct: 78 GIGWLLLASLRRVSIGFLLGAAVAIPVGLLIGMSRTAMLMINPIIQVLKPVSPLAWLPIA 137 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F P +AIF IF + +W+ + + ++PRD EVS+ ++ ++ Sbjct: 138 LAMFNLAEP--------SAIFVIFITSLWSTIINTALGVASVPRDYLEVSQVLEMNHRRR 189 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 W + +P S+P + + +S+ W +VA EM+ G GIG ++ ++ Sbjct: 190 IWKIILPASLPYIFTGLRISLGIAWLVIVAVEMLTGGI------GIGFFVWDEWNRLNVS 243 Query: 240 AILYAMLTMLGVIFLYDQLL 259 ++ A+L + + D +L Sbjct: 244 SVFLAVLVIGLTGLVLDYIL 263 >gi|319784812|ref|YP_004144288.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170700|gb|ADV14238.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 660 Score = 146 bits (369), Expect = 1e-32, Method: Composition-based stats. Identities = 79/527 (14%), Positives = 163/527 (30%), Gaps = 45/527 (8%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYF 123 A T + A+ ++ A + ++ P LD+MQ+IP +L ++ F Sbjct: 149 AMLTLGLISIAVPFCIVTGLFAGIWAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLF 208 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 N + ++A+ A M + L +P ++++ S + QK W + Sbjct: 209 GN--------SPVSAMIATAIFATPPMVRATMLGLSRVPSEIDDFSEMAGCTARQKLWRV 260 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P + P L+ + + V+ + MI G G+G + LA++ + + Sbjct: 261 LLPSARPTLMVGVNQVIMLALNMVIIASMIGAG-------GLGYDVLLALRALKVGEAME 313 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTG-----IYPADSWVLYLFRKTNFLRFI 298 A L ++ + D+L + + K + + YP + + + T L Sbjct: 314 AGLAIVALAIALDRL-SQAIAHSQAKGHVHQEVSPSLWRRYPNLTLAIAILVVTTLLGLF 372 Query: 299 GYSSWNFFSPLSNNVKKLCR------------TLGVIRFHFPENFLQLCSNQRVSYMLDI 346 + ++ L + T+ R N L + Sbjct: 373 VPALAVVPKAITFTTAPLWKAAVNWVTINFFDTIEAFRVALILNLLNPLRAFCEGFPWLG 432 Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 F + + + + + + T++ + IA +I IP+G+ Sbjct: 433 AVFLLGLAGYQLSGLRLAVLVAALTAFCAITGLWEKTMATVYLCGISAFIACLIGIPIGL 492 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 + P L P+ F VV + + + Y Sbjct: 493 MASRSDRFEKIVTPVIDTLQVLPSFCFIIPVVMLFRVGDVTAMIATIAFAVVPAIRY--- 549 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 G P E A T + + + LP P + G A I+ + Sbjct: 550 -TNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIMLGVNQTILMALAMIIICAM 608 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 LG + + K ++ L + + +R Sbjct: 609 VGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGIVADRLF 648 Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 99/258 (38%), Gaps = 23/258 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R F F L V ++G+ L G++ +V + + L + T Sbjct: 422 RAFCEGFPWLGAVFLLGLAGYQLSGLRLAV----LVAALTAFCAITGLWEKTMATVYLCG 477 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 + I+ L +A++S R ++ P++D +Q +P F+ V+ F Sbjct: 478 ISAFIACLIGIPIGLMASRSDRFEKIVTPVIDTLQVLPSFCFIIPVVMLFRVG------- 530 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ A+ A V + +P L E ++ + Q F+ + +P ++P ++ Sbjct: 531 -DVTAMIATIAFAVVPAIRYTNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIM 589 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + ++ ++ M+ D +G + +A+ + D + A L + + Sbjct: 590 LGVNQTILMALAMIIICAMVGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGI 642 Query: 254 LYDQLLFRPMIVWSNKFR 271 + D+L W+ K R Sbjct: 643 VADRL----FSAWTAKAR 656 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 93/287 (32%), Gaps = 23/287 (8%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTL-GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356 + + +N+ L R++ V+ L N ++ + + + + V Sbjct: 53 VADWVSALMRWIKSNLSWLTRSITAVLGVPLDFALNLLAKNFKIGHGAEAYVLPRLSWVG 112 Query: 357 IGIAWQSIGYIVNHFTYQDVLY--VIWLGCITMFRVVVLIIIASIIWIPVGIWIGF---- 410 + A G+ ++ +++ + +L + I +P I G Sbjct: 113 VCAAAFITGHAAGGRKLSLLVGGCFLYIALFGQWTSAMLTLGLISIAVPFCIVTGLFAGI 172 Query: 411 ----RPHISSKI-QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 +P I P L+ P + ++ ++ + ++ ++ Sbjct: 173 WAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIATAIF----ATPPMV 228 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 + G S P++ + + T + ++LP P + G A N I++ Sbjct: 229 RATMLGLSRVPSEIDDFSEMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVIIAS 288 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + + E + L + +AL+R Sbjct: 289 MIGAG-------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 328 >gi|288549732|ref|ZP_05967996.2| nitrate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288318071|gb|EFC57009.1| nitrate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 256 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 77/197 (39%), Gaps = 10/197 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV V +A+I IP+G IG S P LL + Sbjct: 55 PNDMGIGWNVLASLQRVAVGFGLAAIAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAW 114 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 115 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTI 170 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 171 LRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLNVE 224 Query: 554 EVVLGVLIMCCFVLALN 570 +++ ++I+ L L Sbjct: 225 NILIAIVIIGVVGLMLE 241 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 101/266 (37%), Gaps = 24/266 (9%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYAS 66 +RI P L V++ + I G D + + + Sbjct: 6 QRIIPAFLGLGLMVVLWQLAAINSKGFPTPLSTLDSALTLFADPFYRDGPNDMGIGWNVL 65 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++ + L + + P++ +++ + L +L ++ F Sbjct: 66 ASLQRVAVGFGLAAIAGIPLGFLIGRFTFFSRMFNPLIALLRPVSPLAWLPIGLLLFQKA 125 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P A+ + IF +W M + + + IP+D V+R +LS W + P Sbjct: 126 EP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTILRRILFP 177 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +P ++ + +S+ W +VA+EM+ G GIG +I ++ IL A++ Sbjct: 178 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNVENILIAIV 231 Query: 247 TMLGVIFLYDQ---LLFRPMIVWSNK 269 + V + +Q L+ R W K Sbjct: 232 IIGVVGLMLEQGLMLIARRF-SWQEK 256 >gi|326797081|ref|YP_004314901.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326547845|gb|ADZ93065.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 323 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 16/216 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + Y +++ VV ++AS+I IP GI IG + S P Q+ Sbjct: 98 IKVRPYTGKPTFFDQIGTSLYTVVAGFVLASLIAIPGGIIIGLSSSVYSAFNPLIQIFKP 157 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLS-------LLMIFGTQWYILFNVIAGASAFPNDFK 480 + PLV VS +++ + S + W L N G +A D Sbjct: 158 VSPLAWLPLVTMVVSAAYVSKDPMFSKSFLTSMFTVTLCCLWPTLINTAVGVAAIEKDLL 217 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 V+ + + I++P P TG + G AW I +E+ + + GLG Sbjct: 218 NVSKVLRLGWFTHVIKIVIPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLG 271 Query: 541 AYIAESTEKG---SFPEVVLGVLIMCCFVLALNRFL 573 ++ + + G S ++ V+++ L+R + Sbjct: 272 KFVWDEFQNGSSNSLGRIMASVIVIGLIGFLLDRTM 307 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 86/207 (41%), Gaps = 14/207 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + +++ V++ L + S + P++ I + + L +L + Y Sbjct: 116 SLYTVVAGFVLASLIAIPGGIIIGLSSSVYSAFNPLIQIFKPVSPLAWLPLVTMVVSAAY 175 Query: 128 PGKVI---GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 K + L ++F + +W + + I +DL VS+ RL + + Sbjct: 176 VSKDPMFSKSFLTSMFTVTLCCLWPTLINTAVGVAAIEKDLLNVSKVLRLGWFTHVIKIV 235 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAI 241 +P S+P + + +S+ W ++A+EM+ PG+G ++ + L I Sbjct: 236 IPSSIPMMFTGLRLSLGIAWMVLIAAEMLA------QNPGLGKFVWDEFQNGSSNSLGRI 289 Query: 242 LYAMLTMLGVIFLYDQLLF--RPMIVW 266 + +++ + + FL D+ + + M+ W Sbjct: 290 MASVIVIGLIGFLLDRTMLSIQKMVSW 316 >gi|227519676|ref|ZP_03949725.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis TX0104] gi|227072900|gb|EEI10863.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecalis TX0104] Length = 569 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + VIS++ L AKS + ++ PILD MQ++P +L Sbjct: 85 QNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSEKAKSIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P +L E + S+ +GWQ Sbjct: 145 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIRQVPNELVEAADSYGSTGWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++ + + D+ Sbjct: 250 GNGFVNGVALVILAIIIDRF 269 Score = 93.5 bits (231), Expect = 9e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L++ L L I +N L + ++ + Sbjct: 8 VASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIAAFFISNK 67 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 I +I F Y L+ + +T+ V++ +I+ II +P+GI + S Sbjct: 68 KIGLSLFTFIGLMFIYNQNLWNDLMSTVTL--VLLSSVISIIIGVPLGILMAKSEKAKSI 125 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 I P + P V+ V+ + + + G PN Sbjct: 126 ITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPN 181 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E A S+ TGW+ + LP + G A + +++ + Sbjct: 182 ELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIG-------AP 234 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 235 GLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 269 >gi|225571297|ref|ZP_03780293.1| hypothetical protein CLOHYLEM_07395 [Clostridium hylemonae DSM 15053] gi|225159773|gb|EEG72392.1| hypothetical protein CLOHYLEM_07395 [Clostridium hylemonae DSM 15053] Length = 619 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 96/233 (41%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L + ++ + ++ + ++ + V T +L+++V++LLF Sbjct: 384 FLFLILVFLAGWRVRRKLQSGILYAVILCLVGVVGFWDEMILTLSIVLASVVLALLFGLP 443 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L + S R ++ PILD MQ++P+ +L ++ F +A+ A Sbjct: 444 VGILISNSPRANRIVRPILDTMQTMPVFVYLIPALLLFGLG--------NASAVIATVIY 495 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + + ++ E +RSF + WQ + + +P ++P ++ + ++ Sbjct: 496 AIVPVIRLTSLGIRQVDTEVVEAARSFGSTRWQTLFKVQIPQAIPTIMTGVNQTLMMAMA 555 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI G+G + A+ ++ L A ++ + + D+L Sbjct: 556 MVVTCSMI-------GARGLGMEVLNAVNRTEIGRGLVAGGCVVILAVVLDRL 601 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 91/273 (33%), Gaps = 19/273 (6%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS--YMLDIFWFCVVCGVAIGIAWQSIG 365 P ++ + R+ V E L ++L+ + + + W+ Sbjct: 340 PNTDAIDGAVRSFAVSAAPVLEKIQSLLGGMVNGFKWLLEHIPWFLFLILVFLAGWRVRR 399 Query: 366 YIVNHFTYQDVLYVIWL------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 + + Y +L ++ + +T+ V+ +++A + +PVGI I P + ++ Sbjct: 400 KLQSGILYAVILCLVGVVGFWDEMILTLSIVLASVVLALLFGLPVGILISNSPRANRIVR 459 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P + P V+ + + + + + I ++ G + Sbjct: 460 PILDTMQTMPVFVYLIPALLLFGLGNASAVIATVIYAIV----PVIRLTSLGIRQVDTEV 515 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 E A SF T W+ + +P P +TG A + + GL Sbjct: 516 VEAARSFGSTRWQTLFKVQIPQAIPTIMTGVNQTLMMAMAMVVTCSMIG-------ARGL 568 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 G + + + ++ + + L+R Sbjct: 569 GMEVLNAVNRTEIGRGLVAGGCVVILAVVLDRL 601 >gi|325289658|ref|YP_004265839.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324965059|gb|ADY55838.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 271 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I++ RV+ +A ++ I +G+ IG ++ QLL P + PL Sbjct: 68 GQLAKHVGISILRVLEGYSLAVVLGIVLGVAIGLSRSLNRITDFTIQLLRPIPPIAWIPL 127 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + L+ G + IL NV G EV+ + WR+ Sbjct: 128 AIIWFGVEEESK----IFLIFLGGFFPILLNVTDGIRQTEQKLVEVSKVLEASLWRFIFR 183 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++PG P +TG G AW + +E+ + G+G I ++ + V+ Sbjct: 184 LVIPGALPSIMTGLRIGIGSAWLCVVAAELIA------ADRGIGYMIMDARQLLQTDLVI 237 Query: 557 LGVLIMCCFVLALNRFL 573 +G++ + ++ L Sbjct: 238 VGMITIGLIGKIMDTLL 254 Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 18/255 (7%) Query: 23 LAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L ++V +++ + + P + + + L ++ + LR+L ++++ Sbjct: 31 LLILVVWKVLSDLQVINPVALPSPEKVAESFYTMILNGQLAKHVGISILRVLEGYSLAVV 90 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 V SR L + + +++ IP + ++ +++F E + IF Sbjct: 91 LGIVLGVAIGLSRSLNRITDFTIQLLRPIPPIAWIPLAIIWFGVE--------EESKIFL 142 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF + + ++ + + L EVS+ S W+ + L +P ++P ++ + + + Sbjct: 143 IFLGGFFPILLNVTDGIRQTEQKLVEVSKVLEASLWRFIFRLVIPGALPSIMTGLRIGIG 202 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 W VVA+E+I GIG I A + ++ M+T+ + + D LL + Sbjct: 203 SAWLCVVAAELIA------ADRGIGYMIMDARQLLQTDLVIVGMITIGLIGKIMDTLLKQ 256 Query: 262 ---PMIVWSNKFRLE 273 +I W ++ + Sbjct: 257 LEFVLIRWKVNYQGD 271 >gi|300705265|ref|YP_003746868.1| nitrate ABC transporter [Ralstonia solanacearum CFBP2957] gi|299072929|emb|CBJ44285.1| nitrate ABC transporter [Ralstonia solanacearum CFBP2957] Length = 283 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 100/273 (36%), Gaps = 17/273 (6%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQS 363 P + + R ++ + + W + + + W++ Sbjct: 9 PDARSGAGSVPARPAWRDWLVAAVVKGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKA 68 Query: 364 IGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 + Y + V W ++ RV +A+++ IP G +G +++ P Sbjct: 69 AVALFADPFYRNGPNDQGVGWNVLSSLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASP 128 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 LL + P+ + + N + + W ++ N G + P D+ Sbjct: 129 IISLLRPVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYL 184 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 VA +++ W+ + ++ P + PY +TG + G AW + +E+ + G G+G Sbjct: 185 NVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIG 238 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ + +V+ + ++ L L + L Sbjct: 239 FWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQAL 271 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 + FP FVL I + + + + V + + Sbjct: 34 KGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 93 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 94 SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 205 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259 Query: 248 MLGVIFLYDQLLF 260 + V L +Q L Sbjct: 260 IGVVGLLLEQALL 272 >gi|152970769|ref|YP_001335878.1| putative nitrate transporter component; NasE [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895282|ref|YP_002920017.1| nitrate transporter component [Klebsiella pneumoniae NTUH-K2044] gi|330009851|ref|ZP_08306609.1| nitrate ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150955618|gb|ABR77648.1| putative nitrate transporter component; NasE [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547599|dbj|BAH63950.1| nitrate transporter component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328534712|gb|EGF61275.1| nitrate ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 294 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV V +A++ IP+G IG + P LL + Sbjct: 93 PNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAW 152 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 153 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNV 261 Score = 138 bits (347), Expect = 4e-30, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 14/179 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L L +S + P++ +++ + L +L Sbjct: 97 GIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAWLPIG 156 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P A+ + IF +W M + + + IP+D V+R +LS W Sbjct: 157 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + P +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNV 261 >gi|13476102|ref|NP_107672.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099] gi|14026862|dbj|BAB53458.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099] Length = 659 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 82/530 (15%), Positives = 159/530 (30%), Gaps = 51/530 (9%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM-VLVPILDIMQSIPILGFLTFTVVYF 123 A T + A+ ++ A + ++ P LD+MQ+IP +L ++ F Sbjct: 148 AMLTLALISIAVPFCIVTGLFAGIWAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLF 207 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 N + ++A+ A M + L +P ++ E S + QK W + Sbjct: 208 GN--------SPVSAMIATAIFATPPMVRATMLGLTRVPLEIGEFSDMAGCTARQKLWRV 259 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P + P L+ + + V+ + MI G G+G + LA++ + + Sbjct: 260 LLPSARPTLMVGVNQVIMLALNMVIIASMIGAG-------GLGYDVLLALRALKVGEAME 312 Query: 244 AMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 A L ++ + D+L ++K W Y + Sbjct: 313 AGLAIVALAIALDRLS----QAIAHKQAKGHVHQAVDPSFWRRYPNLTLAIAILSVTTLL 368 Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC---SNQRVSYMLDIFWFCVVCGVAIGIA 360 P V K + N++ + + + L + V G Sbjct: 369 GLLVPAFAAVPKAITFTTAPLWKAAVNWVTINFFDAIEAFRVALILNVLNPVRAFCEGFP 428 Query: 361 WQSIGYIVNHFTYQDVLYVIWL-----------------GCITMFRVVVLIIIASIIWIP 403 W +++ YQ + T++ + IA +I IP Sbjct: 429 WLGAVFLLGLAGYQLSGLRLAALVAALTVFCAVTGLWEKTMATVYLCGISAFIACLIGIP 488 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G+ + P L P+ F VV + + + Y Sbjct: 489 IGLMAARSDRFEKIVTPIIDTLQVLPSFCFIIPVVMLFRVGDVTAMIATIAFAVVPAIRY 548 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 G P E A T + + + LP P + G A I+ Sbjct: 549 ----TNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIMLGVNQTILMALAMIII 604 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + LG + + K ++ L + + +R Sbjct: 605 CAMVGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGIVADRLF 647 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 100/258 (38%), Gaps = 23/258 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R F F L V ++G+ L G++ + V + + V L + T Sbjct: 421 RAFCEGFPWLGAVFLLGLAGYQLSGLRLAAL----VAALTVFCAVTGLWEKTMATVYLCG 476 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 + I+ L +AA+S R ++ PI+D +Q +P F+ V+ F Sbjct: 477 ISAFIACLIGIPIGLMAARSDRFEKIVTPIIDTLQVLPSFCFIIPVVMLFRVG------- 529 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 ++ A+ A V + +P L E ++ + Q F+ + +P ++P ++ Sbjct: 530 -DVTAMIATIAFAVVPAIRYTNHGIRQVPPALIEAAKVSGCTPRQTFFRVQLPLALPEIM 588 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + ++ ++ M+ D +G + +A+ + D + A L + + Sbjct: 589 LGVNQTILMALAMIIICAMVGTRD-------LGQEVFIALSKADSGRGIVAGLAIAFIGI 641 Query: 254 LYDQLLFRPMIVWSNKFR 271 + D+L W+ K R Sbjct: 642 VADRL----FNAWTAKAR 655 Score = 56.1 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 21/289 (7%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F ++ S LS + + LG + F N L + Sbjct: 51 PFADWVSALMGWIKSNLSWLTRSITAVLG-VPLDFALNLLAKNFKIGHGADAYVLPRLSW 109 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-- 410 GV + +++ + +L + I +P I G Sbjct: 110 VGVCAVAFIAGHAVGGRKLSLLVGGCFLYIALFGQWTSAMLTLALISIAVPFCIVTGLFA 169 Query: 411 ------RPHISSKI-QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +P I P L+ P + ++ ++ + ++ Sbjct: 170 GIWAWRKPWAERLIVSPALDLMQTIPTFAYLIPMLLLFGNSPVSAMIATAIF----ATPP 225 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ++ + G + P + E + T + ++LP P + G A N I+ Sbjct: 226 MVRATMLGLTRVPLEIGEFSDMAGCTARQKLWRVLLPSARPTLMVGVNQVIMLALNMVII 285 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + E + L + +AL+R Sbjct: 286 ASMIGAG-------GLGYDVLLALRALKVGEAMEAGLAIVALAIALDRL 327 >gi|16124864|ref|NP_419428.1| nitrate ABC transporter permease [Caulobacter crescentus CB15] gi|221233583|ref|YP_002516019.1| nitrate transport permease protein NrtB [Caulobacter crescentus NA1000] gi|13421816|gb|AAK22596.1| nitrate ABC transporter, permease protein [Caulobacter crescentus CB15] gi|220962755|gb|ACL94111.1| nitrate transport permease protein nrtB [Caulobacter crescentus NA1000] Length = 296 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 23/253 (9%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYAS 66 P + +L + V I + + + ++ + L+ L + + Sbjct: 45 TLPPLVTVLVILGVWQAIVGESYTGL-PSPKQVWLESKELILNPFYDNGGVDKGLFWHVA 103 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ IS + + +R L PI +++++P L +L ++ F Sbjct: 104 TSLQRVGIGFSISAVVGVLLGVFVGSNRWAHRSLDPIFQVLRTVPPLAWLPISLAAFHQA 163 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P +A+F IF + +W + + + NIP D V++ RLS + F+ + +P Sbjct: 164 QP--------SALFVIFITAIWPIIINTAVGVRNIPSDYVNVAKVLRLSPVEYFFKILLP 215 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 + P + + + + W +VASEM++ G GIG +I + IL + Sbjct: 216 ATTPYIFTGLRIGIGMSWLAIVASEMLLGGV------GIGFFIWDQYNASRISDILVGLA 269 Query: 247 TMLGVIFLYDQLL 259 + F D+L+ Sbjct: 270 WVGLTGFFLDRLV 282 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + I++++ + +G+++G + P Q+L P + P+ + Sbjct: 98 LFWHVATSLQRVGIGFSISAVVGVLLGVFVGSNRWAHRSLDPIFQVLRTVPPLAWLPISL 157 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ W I+ N G P+D+ VA ++ ++ I+ Sbjct: 158 AAF----HQAQPSALFVIFITAIWPIIINTAVGVRNIPSDYVNVAKVLRLSPVEYFFKIL 213 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A + SE+ G G+G +I + ++++G Sbjct: 214 LPATTPYIFTGLRIGIGMSWLAIVASEMLLGG------VGIGFFIWDQYNASRISDILVG 267 Query: 559 VLIMCCFVLALNRFL 573 + + L+R + Sbjct: 268 LAWVGLTGFFLDRLV 282 >gi|56750321|ref|YP_171022.1| nitrate/nitrite ABC transporter permease [Synechococcus elongatus PCC 6301] gi|81300047|ref|YP_400255.1| nitrate transport permease [Synechococcus elongatus PCC 7942] gi|585581|sp|P38044|NRTB_SYNE7 RecName: Full=Nitrate transport permease protein nrtB gi|48970|emb|CAA43810.1| nitrate transporter [Synechococcus elongatus PCC 7942] gi|56685280|dbj|BAD78502.1| ABC-type nitrate/nitrite transport system permease protein [Synechococcus elongatus PCC 6301] gi|81168928|gb|ABB57268.1| nitrate transport permease [Synechococcus elongatus PCC 7942] gi|445046|prf||1908370A nitrate transporter Length = 279 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 13/198 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I++ RV + ++A+ I VG +G + + P Q+L P +FP+ + Sbjct: 80 LGLQILISLQRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFPISL 139 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N ++ W I+ N G + P+D+ VA ++ + I+ Sbjct: 140 MVFQ----DANTSAIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNIL 195 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK---GSFPEV 555 +P PY G A G AW A + +E+ G+G +I ++ GS ++ Sbjct: 196 IPSTVPYVFAGLRIAVGLAWLAIVAAEMLK------ADGGIGYFIWDAYNAGGDGSSSQI 249 Query: 556 VLGVLIMCCFVLALNRFL 573 +L + + L+L+R + Sbjct: 250 ILAIFYVGLVGLSLDRLV 267 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 105/259 (40%), Gaps = 26/259 (10%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHG---------IQETTVPRDIVDIVPITLDVHSLPQ 63 + P + L F+ + +I+ +L + T +P + L Sbjct: 23 KPFLPYVVCLPIFLAIWQVISAILGQDRLPGPINVVANTWMPYIVEPFFDNGGTSKGLGL 82 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + R+ +++ + + S+ LG L P++ +++++P L + +++ F Sbjct: 83 QILISLQRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFPISLMVF 142 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + A +AIF IF + +W + + + IP D V+R +LS + Sbjct: 143 QD--------ANTSAIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNI 194 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK---EQDLLA 240 +P ++P + + +++ W +VA+EM+ GIG +I A + Sbjct: 195 LIPSTVPYVFAGLRIAVGLAWLAIVAAEML------KADGGIGYFIWDAYNAGGDGSSSQ 248 Query: 241 ILYAMLTMLGVIFLYDQLL 259 I+ A+ + V D+L+ Sbjct: 249 IILAIFYVGLVGLSLDRLV 267 >gi|159898858|ref|YP_001545105.1| nitrate ABC transporter inner membrane subunit [Herpetosiphon aurantiacus ATCC 23779] gi|159891897|gb|ABX04977.1| nitrate ABC transporter, inner membrane subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 282 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 13/237 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIII 396 W ++ +++ Y + +G ++ RV I Sbjct: 41 AGLWQVAAWISGGTLPTPLATASTLRELLSDPFYDNGPNDKGIGIQLMASLGRVFTGWGI 100 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 I IP+G+ +G + + P ++L ++PL ++ + N + + Sbjct: 101 GIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVL----HNAPKAVVFAI 156 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + + W L N G P D K V+ F + WR+ ++LP FP +TG + G Sbjct: 157 VITSLWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGI 216 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 AW + E+ + G TGLG ++ +S S V+ +L++ LAL+R Sbjct: 217 AWMVIVAGEMLAGG------TGLGFFVWDSWNALSLERVMSAILVIGITGLALDRLF 267 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 17/207 (8%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ + I + L S L +L P+++I++ + L + + Sbjct: 87 LMASLGRVFTGWGIGIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVLH 146 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 N A A +FAI + +W + + NIP DL+ VS+ FR S W+ + Sbjct: 147 N--------APKAVVFAIVITSLWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVL 198 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ M +SM W +VA EM+ G G+G ++ + L ++ A Sbjct: 199 LPAAFPAILTGMRLSMGIAWMVIVAGEMLAGGT------GLGFFVWDSWNALSLERVMSA 252 Query: 245 MLTMLGVIFLYDQ---LLFRPMIVWSN 268 +L + D+ L+ + M W Sbjct: 253 ILVIGITGLALDRLFSLIGQRMAAWQE 279 >gi|241766705|ref|ZP_04764544.1| nitrate ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241362958|gb|EER58652.1| nitrate ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 316 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV V +A+++ IP G IG +S P LL + P+ + Sbjct: 118 VGWNVLASLQRVAVGFGLAAVVGIPAGFAIGRFAFLSRMFNPLISLLRPVSPLAWLPIGL 177 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 178 LVFK----GANPAAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLNLSEWKVLTKIL 233 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 234 FPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 287 Query: 559 VLIMCCFVLALN 570 + ++ L L Sbjct: 288 IFVIGIVGLLLE 299 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 83/205 (40%), Gaps = 14/205 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ + + L + P++ +++ + L +L ++ Sbjct: 120 WNVLASLQRVAVGFGLAAVVGIPAGFAIGRFAFLSRMFNPLISLLRPVSPLAWLPIGLLV 179 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 180 FKGANP--------AAIWTIFICSIWPMVINTAVGVQRVPQDYLNVARVLNLSEWKVLTK 231 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 232 ILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 285 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267 A+ + V L + L + ++ Sbjct: 286 IAIFVIGIVGLLLEAALVKLATAFT 310 >gi|134093701|ref|YP_001098776.1| nitrate ABC transporter permease [Herminiimonas arsenicoxydans] gi|133737604|emb|CAL60647.1| Nitrate transport permease protein nrtB [Herminiimonas arsenicoxydans] Length = 304 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV V +A+++ IP+G IG +S P LL + P+ + Sbjct: 106 IGWNILASLKRVAVGFGLAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLPIGL 165 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + W ++ N G P D+ VA +++ W+ I+ Sbjct: 166 LVFKAA----DPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKIVTKIL 221 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 P + PY +TG A G AW + +E+ + G G+G ++ + + Sbjct: 222 FPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLN 268 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 111/263 (42%), Gaps = 22/263 (8%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIV------DIVPITL 56 ++++ P F+S + P IF +L VLV II+ GI V Sbjct: 44 MFSLRPFFMS--VVPPIFGVLFLVLVWEIISAKNSGIPSPAVTLKSAIDLFADPFYSNGP 101 Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R+ ++ L + + + L + PI+ +++ + L +L Sbjct: 102 NDQGIGWNILASLKRVAVGFGLAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWL 161 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P AAI++IF +W M + + +P+D V+R LS Sbjct: 162 PIGLLVFKAADP--------AAIWSIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSE 213 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 W+ + P +P ++ + +++ W +VA+EM+ G GIG ++ Sbjct: 214 WKIVTKILFPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNL 267 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 ++ I+ A++ + V + +Q+L Sbjct: 268 NVAHIIIAIVVIGIVGLVLEQIL 290 >gi|206577969|ref|YP_002237923.1| nitrate ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288934833|ref|YP_003438892.1| nitrate ABC transporter inner membrane protein [Klebsiella variicola At-22] gi|290508976|ref|ZP_06548347.1| nitrate ABC transporter, permease [Klebsiella sp. 1_1_55] gi|206567027|gb|ACI08803.1| nitrate ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889542|gb|ADC57860.1| nitrate ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778370|gb|EFD86367.1| nitrate ABC transporter, permease [Klebsiella sp. 1_1_55] Length = 294 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV V +A++ IP+G IG + P LL + Sbjct: 93 PNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAW 152 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 153 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNV 261 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 14/179 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L L +S + P++ +++ + L +L Sbjct: 97 GIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRPVSPLAWLPIG 156 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P A+ + IF +W M + + + IP+D V+R +LS W Sbjct: 157 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + P +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNV 261 >gi|83746841|ref|ZP_00943888.1| NrtB [Ralstonia solanacearum UW551] gi|83726426|gb|EAP73557.1| NrtB [Ralstonia solanacearum UW551] Length = 283 Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 97/262 (37%), Gaps = 17/262 (6%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQSIGYIVNHFTY- 373 R ++ + + W + + + W++ + Y Sbjct: 20 ARPAWRDWLVAAVVKGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYR 79 Query: 374 --QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + V W ++ RV +A+++ IP G +G +++ P LL Sbjct: 80 NGPNDQGVGWNVLSSLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPL 139 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + P+ + + N + + W ++ N G + P D+ VA +++ W Sbjct: 140 AWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEW 195 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + + ++ P + PY +TG + G AW + +E+ + G G+G ++ + Sbjct: 196 KIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIGFWLWDEWNNLK 249 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 +V+ + ++ L L + L Sbjct: 250 VEHIVIAIFVIGVVGLLLEQAL 271 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 + FP FVL I + + + + V + + Sbjct: 34 KGFPPALGFALFVLAWQGIAMAIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 93 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 94 SLARVGAGFGMAAVVGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 205 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259 Query: 248 MLGVIFLYDQLLF 260 + V L +Q L Sbjct: 260 IGVVGLLLEQALL 272 >gi|171778758|ref|ZP_02919854.1| hypothetical protein STRINF_00706 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282715|gb|EDT48139.1| hypothetical protein STRINF_00706 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 571 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 15/201 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L T +L A ++S++ AKS R+ ++ PILD MQ++P +L Sbjct: 88 QGLWDGMINTFTLVLIASLMSIVIGIPLGIWMAKSDRVRSIVNPILDFMQTMPAFVYLIP 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + IP +L E + SF + Q Sbjct: 148 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGIREIPEELIEAAESFGSTEGQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + + +P + ++ + ++ VV + MI PG+G+ + A++ ++ Sbjct: 200 RLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGNGVLSALQHAEI 252 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 A + L ++ + + D+ + Sbjct: 253 GAGFVSGLALVILAIIIDRFI 273 Score = 91.1 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 68/195 (34%), Gaps = 12/195 (6%) Query: 380 IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +W G I T V++ +++ +I IP+GIW+ + S + P + PA V+ V Sbjct: 90 LWDGMINTFTLVLIASLMSIVIGIPLGIWMAKSDRVRSIVNPILDFMQTMPAFVYLIPAV 149 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + + G P + E A SF T + + Sbjct: 150 AFFGIGMVPGVFASVIF----ALPPTVRFTNLGIREIPEELIEAAESFGSTEGQRLFKVE 205 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP + G A + + + + GLG + + + + Sbjct: 206 LPLAKNTILAGVNQTIMLALSMVVTASMIG-------APGLGNGVLSALQHAEIGAGFVS 258 Query: 559 VLIMCCFVLALNRFL 573 L + + ++RF+ Sbjct: 259 GLALVILAIIIDRFI 273 >gi|71907775|ref|YP_285362.1| binding-protein dependent transport system inner membrane protein [Dechloromonas aromatica RCB] gi|71847396|gb|AAZ46892.1| Binding-protein-dependent transport systems inner membrane component [Dechloromonas aromatica RCB] Length = 271 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 10/202 (4%) Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + + ++FRV+ +I + + +P G+ +G I + P Q+L Sbjct: 61 STLAWMFSGELPHDAYSSLFRVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPI 120 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P + PL + N L+ G + +L N IAG + A + + Sbjct: 121 PPIAYIPLAILWFGLG----NPPSFFLIAIGAFFPVLMNTIAGVRQVDGIYLRAARNLGV 176 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 W + +ILP PY + G G A+ IVSE+ + GLG I E+ E Sbjct: 177 NQWTMFTRVILPAATPYILAGVRIGIGTAFIVVIVSEMIA------VNDGLGFRILEARE 230 Query: 549 KGSFPEVVLGVLIMCCFVLALN 570 +++ G++ + LA++ Sbjct: 231 FMWSDKIIAGMITIGLLGLAID 252 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 88/230 (38%), Gaps = 14/230 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 + I P++ + LP A + R+++ +I + L Sbjct: 42 VAIKWWAYLMPGQPQEAGQSTLAWMFSGELPHDAYSSLFRVIAGFLIGAGLALPFGLLMG 101 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 S R+ + P++ I++ IP + ++ +++F P + F I + + Sbjct: 102 ASTRIYALFNPLMQILRPIPPIAYIPLAILWFGLGNPP--------SFFLIAIGAFFPVL 153 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + +R+ ++ W F + +P + P ++ + + + + V+ SE Sbjct: 154 MNTIAGVRQVDGIYLRAARNLGVNQWTMFTRVILPAATPYILAGVRIGIGTAFIVVIVSE 213 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 MI V D G+G I A + I+ M+T+ + D + R Sbjct: 214 MIAVND------GLGFRILEAREFMWSDKIIAGMITIGLLGLAIDTAVSR 257 >gi|299068062|emb|CBJ39276.1| nitrate ABC transporter [Ralstonia solanacearum CMR15] Length = 283 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 101/273 (36%), Gaps = 17/273 (6%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI----GIAWQS 363 P ++ + R ++ + + W + V + W++ Sbjct: 9 PGAHASAGSVPSKPAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAVPALPTPAVTWKA 68 Query: 364 IGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 + Y + V W ++ RV +A++I IP G +G +++ P Sbjct: 69 AMALFADPFYRNGPNDQGVGWNVLASLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASP 128 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 LL + P+ + + N + + W ++ N G + P D+ Sbjct: 129 IISLLRPVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRVPQDYL 184 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 VA +++ W+ + ++ P + PY +TG + G AW + +E+ + G G+G Sbjct: 185 NVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG------VGIG 238 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ + +V+ + ++ L L + L Sbjct: 239 FWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQAL 271 Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 + FP + FVL I + + + + + + + Sbjct: 34 KGFPPMLGFALFVLAWQGIAMAVPALPTPAVTWKAAMALFADPFYRNGPNDQGVGWNVLA 93 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 94 SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPA 205 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259 Query: 248 MLGVIFLYDQLLF 260 + V L +Q L Sbjct: 260 IGVVGLLLEQALL 272 >gi|329115943|ref|ZP_08244660.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus parauberis NCFD 2020] gi|326906348|gb|EGE53262.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus parauberis NCFD 2020] Length = 575 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 95/235 (40%), Gaps = 16/235 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 +++ I + ++ +P + + L + T ++ A +IS++ Sbjct: 53 ALLFILLVTIAVFFLSKKKWPLPAFTFLGLLFIYNQG-LWEELINTFTLVVVASLISIVI 111 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 112 GVPLGIWMAKNSTVRNIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFAL 168 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + I +L E + SF + QK + + +P + ++ + +M Sbjct: 169 PPTVRF-----TNLGIREISTELVEAADSFGSTSKQKLFKVELPLAKNTIMAGINQTMML 223 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV MI PG+G + A++ D+ + L ++ + + D+ Sbjct: 224 ALSMVVTGSMI-------GAPGLGRKVLSALQHADIGTGFVSGLALVILAIILDR 271 Score = 91.9 bits (227), Expect = 3e-16, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I + W + + + T VVV +I+ + Sbjct: 51 IPALLFILLVTIAVFFLSKKKWPLPAFTFLGLLFIYNQGLWEELINTFTLVVVASLISIV 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + + P + PA V+ V+ + + Sbjct: 111 IGVPLGIWMAKNSTVRNIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + G + E A SF T + + LP + G A + Sbjct: 167 ALPPTVRFTNLGIREISTELVEAADSFGSTSKQKLFKVELPLAKNTIMAGINQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGRKVLSALQHADIGTGFVSGLALVILAIILDR 271 >gi|94987791|ref|YP_595892.1| glycine betaine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94541299|gb|ABF31348.1| glycine betaine-binding protein [Streptococcus pyogenes MGAS9429] Length = 578 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 91.5 bits (226), Expect = 4e-16, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|50913550|ref|YP_059522.1| glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10394] gi|139473033|ref|YP_001127748.1| glycine-betaine binding permease protein [Streptococcus pyogenes str. Manfredo] gi|50902624|gb|AAT86339.1| Glycine betaine-binding protein [Streptococcus pyogenes MGAS10394] gi|134271279|emb|CAM29495.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes str. Manfredo] Length = 575 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 91.5 bits (226), Expect = 4e-16, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|224824744|ref|ZP_03697851.1| binding-protein-dependent transport systems inner membrane component [Lutiella nitroferrum 2002] gi|224603237|gb|EEG09413.1| binding-protein-dependent transport systems inner membrane component [Lutiella nitroferrum 2002] Length = 255 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ +++RVVV + + + +P+G+ +G P + P QLL P + PL Sbjct: 53 GELVHDSIASLYRVVVGFVAGAALALPLGLTMGSSPRLYGLFNPMLQLLRPIPPIAYIPL 112 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + N L+ G + +L N I+G + A + + + Sbjct: 113 AILWFGLG----NPPSVFLIAIGAFFPVLMNTISGVRHVDGIYLRAARNLGVGRLALFTR 168 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LP PY +TG G A+ IVSE+ + GLG I E+ E +++ Sbjct: 169 VMLPAATPYILTGVRIGIGTAFIVVIVSEMIA------VNDGLGYRILEAREFMWSDKII 222 Query: 557 LGVLIMCCFVLALN 570 G++ + LAL+ Sbjct: 223 AGMITIGLLGLALD 236 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 79/218 (36%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + L L + + R++ V S RL + Sbjct: 36 LPAPSAVAAKWWEALLSGELVHDSIASLYRVVVGFVAGAALALPLGLTMGSSPRLYGLFN 95 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+L +++ IP + ++ +++F P ++F I + + + + ++ Sbjct: 96 PMLQLLRPIPPIAYIPLAILWFGLGNPP--------SVFLIAIGAFFPVLMNTISGVRHV 147 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +R+ + F + +P + P ++ + + + + V+ SEMI V D Sbjct: 148 DGIYLRAARNLGVGRLALFTRVMLPAATPYILTGVRIGIGTAFIVVIVSEMIAVND---- 203 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A + I+ M+T+ + D + Sbjct: 204 --GLGYRILEAREFMWSDKIIAGMITIGLLGLALDSAM 239 >gi|170738745|ref|YP_001767400.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168193019|gb|ACA14966.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 285 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 92/271 (33%), Gaps = 15/271 (5%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R G+ R P L + L G W + + D Sbjct: 21 PRRAPGLARLREPLLALAFPLALGAVWHLATVGRPYSLIPPPGEVWTELRDLAVGGVNDD 80 Query: 376 VLYVIWLG--CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 L ++ RV+ +A + +P+G+ IG P + + P Q+L P + Sbjct: 81 AFSGTLLTHLAASVSRVLGGFGLAVLAALPLGLLIGRVPLVRQLLDPTFQILRPVPVTAW 140 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + + L+ G + IL N + G + E A+ G Sbjct: 141 LPLAMILFGLGPRS----ACFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCRGSAQ 196 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + ++LP P TG G AW +V E+ TGLGA I E+ + Sbjct: 197 FTQVVLPAALPSIFTGLRLGLGFAWVVIVVGEM------TGVPTGLGAMIMEARQLSRTE 250 Query: 554 EVVLGVLIMCCFVLALNR---FLWHPLYLYG 581 V+ G++++ +R + L + Sbjct: 251 IVICGMVVIGVAGFVSDRIVTLIGRRLLAWS 281 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 85/213 (39%), Gaps = 17/213 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L + + + R+L +++L L + + +L P I++ +P+ +L Sbjct: 84 GTLLTHLAASVSRVLGGFGLAVLAALPLGLLIGRVPLVRQLLDPTFQILRPVPVTAWLPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F +A F +F + + + + ++ L E + G Sbjct: 144 AMILFGLG--------PRSACFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCRGSA 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +F + +P ++P + + + + W +V EM V G+G+ I A + Sbjct: 196 QFTQVVLPAALPSIFTGLRLGLGFAWVVIVVGEMTGVPT------GLGAMIMEARQLSRT 249 Query: 239 LAILYAMLTMLGVIFLYDQ---LLFRPMIVWSN 268 ++ M+ + F+ D+ L+ R ++ WS Sbjct: 250 EIVICGMVVIGVAGFVSDRIVTLIGRRLLAWSP 282 >gi|304397577|ref|ZP_07379454.1| nitrate ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304354749|gb|EFM19119.1| nitrate ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 290 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 88/256 (34%), Gaps = 13/256 (5%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 K +R + + I + WQ+ + Y Sbjct: 27 PKAAVRPARLRPFLQRCIPAAGGLLLMLLVWQIAALFEPSFPSPYATWQAAQVLFADPFY 86 Query: 374 QDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + + W ++ RV + +A+++ IP G +G ++ P LL Sbjct: 87 SNGPNDQGIGWNVMASLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSP 146 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + P+ + + + + W ++ N G P D+ VA ++ Sbjct: 147 LAWLPIGLLLFQRAEPAASWT----IFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSE 202 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W R I+LP + P +TG + G AW + +E+ + G G+G +I Sbjct: 203 WTVMRRILLPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNL 256 Query: 551 SFPEVVLGVLIMCCFV 566 + +++ +LI+ Sbjct: 257 NVANILIAILIIGVVG 272 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 20/246 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINIL------LHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 +R P LL +LV I + + + + + Sbjct: 41 QRCIPAAGGLLLMLLVWQIAALFEPSFPSPYATWQAAQVLFADPFYSNGPNDQGIGWNVM 100 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++ L L + + + PI+ +++ + L +L ++ F Sbjct: 101 ASLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSPLAWLPIGLLLFQRA 160 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P AA + IF +W M + + + IP+D V+R +LS W + +P Sbjct: 161 EP--------AASWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTVMRRILLP 212 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +P ++ + +S+ W +VA+EM+ G GIG +I ++ IL A+L Sbjct: 213 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVANILIAIL 266 Query: 247 TMLGVI 252 + V Sbjct: 267 IIGVVG 272 >gi|188996007|ref|YP_001930258.1| nitrate ABC transporter, inner membrane subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|188931074|gb|ACD65704.1| nitrate ABC transporter, inner membrane subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 256 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ +I S+I IPVG +G +++ Q+L +FP+ + Sbjct: 63 IGWQLYYSLKRVILGFLIGSLIGIPVGFILGVFGRLNAMFNSLIQILRPVSPLAWFPIGL 122 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N + + W L N GAS P DFK V+ F + ++RY++ Sbjct: 123 ALFQ----NSEKASIFTIAITSIWPTLINTAYGASTIPQDFKNVSKVFGFSILNYFRYVV 178 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P F + +TG + G AW + SE+ + G TG+G YI +S + V+ Sbjct: 179 VPYTFSFTLTGLKISIGIAWMVIVASEMLAGG------TGIGFYIWDSWNALNLRNVMSA 232 Query: 559 VLIMCCFVLALN 570 ++++ L+ Sbjct: 233 IILIGVIGYILD 244 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 84/200 (42%), Gaps = 14/200 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R++ +I L + RL + ++ I++ + L + Sbjct: 59 NDKGIGWQLYYSLKRVILGFLIGSLIGIPVGFILGVFGRLNAMFNSLIQILRPVSPLAWF 118 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 + F N +E A+IF I + +W + IP+D + VS+ F S Sbjct: 119 PIGLALFQN--------SEKASIFTIAITSIWPTLINTAYGASTIPQDFKNVSKVFGFSI 170 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 F Y+ VP++ + + +S+ W +VASEM+ G GIG YI + Sbjct: 171 LNYFRYVVVPYTFSFTLTGLKISIGIAWMVIVASEMLAGGT------GIGFYIWDSWNAL 224 Query: 237 DLLAILYAMLTMLGVIFLYD 256 +L ++ A++ + + ++ D Sbjct: 225 NLRNVMSAIILIGVIGYILD 244 >gi|86748882|ref|YP_485378.1| nitrate transport permease [Rhodopseudomonas palustris HaA2] gi|86571910|gb|ABD06467.1| nitrate transport permease [Rhodopseudomonas palustris HaA2] Length = 299 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+I+ I +G+ +G + P Q+L P + Sbjct: 101 LFWHLSASLQRVALGYSLAAIVGIALGVLVGQSVWAMRGLDPIFQVLRTIPPLA----WL 156 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ + W I+ N G P D++ VA+ + ++ ++ Sbjct: 157 PLALAAFRDGQPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFTKVM 216 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A I +E+ G G+G +I ++ E++L Sbjct: 217 LPSAAPYIFTGLRIGIGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILA 270 Query: 559 VLIMCCFVLALNRFL 573 + + L+R + Sbjct: 271 LFYVGIIGFVLDRMI 285 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 103/254 (40%), Gaps = 23/254 (9%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYA 65 R+ P + ++ ++ G + D + D L + Sbjct: 47 RVIPPLIVFTLLMVFWELVCRQA-GSALPPPSKVYSDTKELIFDPFFDRGGLDKGLFWHL 105 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 S + R+ ++ + L +S L PI ++++IP L +L + F + Sbjct: 106 SASLQRVALGYSLAAIVGIALGVLVGQSVWAMRGLDPIFQVLRTIPPLAWLPLALAAFRD 165 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 P +AIF IF + +W + + + NIP+D V+ +L+ + F + + Sbjct: 166 GQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVQLNPLEFFTKVML 217 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + P + + + + W ++A+EM++ G GIG +I A + I+ A+ Sbjct: 218 PSAAPYIFTGLRIGIGLSWLAIIAAEMLIGGV------GIGFFIWDAWNSSHISEIILAL 271 Query: 246 LTMLGVIFLYDQLL 259 + + F+ D+++ Sbjct: 272 FYVGIIGFVLDRMI 285 >gi|300692646|ref|YP_003753641.1| nitrate ABC transporter [Ralstonia solanacearum PSI07] gi|299079706|emb|CBJ52383.1| nitrate ABC transporter [Ralstonia solanacearum PSI07] Length = 283 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 103/278 (37%), Gaps = 23/278 (8%) Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---------- 358 L+ + + G + + + + + F V+ I Sbjct: 4 LAKALPGAQSSAGSVPARPAWRDWLVAAVVKGFPPVLGFALFVLAWQGIAMTIPALPTPA 63 Query: 359 IAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 + W++ + Y + V W ++ RV +A++I IP G +G ++ Sbjct: 64 VTWKAAVALFADPFYRNGPNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLLGRFAFLN 123 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P LL + P+ + + N + + W ++ N G + Sbjct: 124 AMASPIISLLRPVSPLAWLPIGLLLFK----SANPAAIWAIFICSIWPMVINTAVGVTRV 179 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P D+ VA +++ W+ + ++ P + PY +TG + G AW + +E+ + G Sbjct: 180 PQDYLNVARVLNLSEWKVFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG----- 234 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+G ++ + +V+ + ++ L L + L Sbjct: 235 -VGIGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQAL 271 Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 100/253 (39%), Gaps = 20/253 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASR 67 + FP + FVL I + + + + V + + Sbjct: 34 KGFPPVLGFALFVLAWQGIAMTIPALPTPAVTWKAAVALFADPFYRNGPNDQGVGWNVLS 93 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + ++ + L + L + PI+ +++ + L +L ++ F + Sbjct: 94 SLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSAN 153 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 P AAI+AIF +W M + + +P+D V+R LS W+ F + P Sbjct: 154 P--------AAIWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKVFTRVLFPA 205 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A+ Sbjct: 206 VLPYMLTGVRLSIGTAWLVIVAAEMLTGGV------GIGFWLWDEWNNLKVEHIVIAIFV 259 Query: 248 MLGVIFLYDQLLF 260 + V L +Q L Sbjct: 260 IGVVGLLLEQALL 272 >gi|152981495|ref|YP_001352171.1| ABC-type nitrate transport system, permease component [Janthinobacterium sp. Marseille] gi|151281572|gb|ABR89982.1| ABC-type nitrate transport system, permease component [Janthinobacterium sp. Marseille] Length = 309 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV + +A+++ IP+G IG +S P LL + P+ + Sbjct: 111 IGWNILASLKRVGMGFGMAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLPIGL 170 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + W ++ N G P D+ VA ++ W+ I+ Sbjct: 171 LVFKAA----DPAAIWSIFICSIWPMIINTAVGVQRVPQDYMNVAKVLKLSEWKIVTKIL 226 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + P +++ Sbjct: 227 FPSVLPYMLTGVRLAIGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVPHIIIA 280 Query: 559 VLIMCCFVLALNRFL 573 ++++ L L + L Sbjct: 281 IVVIGVVGLILEQIL 295 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 105/251 (41%), Gaps = 20/251 (7%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL------DVHSLPQYASRT 68 + P IF ++ +LV II+ GI V + + + + Sbjct: 59 VLPPIFGMVFLILVWEIISAKSSGIPSPLVTFQSAQALFADPFYSNGPNDQGIGWNILAS 118 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ ++ L + + + L + PI+ +++ + L +L ++ F P Sbjct: 119 LKRVGMGFGMAALVGIPLGFMIGRFKFLSGMFNPIISLLKPVSPLAWLPIGLLVFKAADP 178 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 AAI++IF +W M + + +P+D V++ +LS W+ + P Sbjct: 179 --------AAIWSIFICSIWPMIINTAVGVQRVPQDYMNVAKVLKLSEWKIVTKILFPSV 230 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ A++ + Sbjct: 231 LPYMLTGVRLAIGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVPHIIIAIVVI 284 Query: 249 LGVIFLYDQLL 259 V + +Q+L Sbjct: 285 GVVGLILEQIL 295 >gi|169796004|ref|YP_001713797.1| nitrate ABC transporter, membrane protein [Acinetobacter baumannii AYE] gi|213157262|ref|YP_002319307.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii AB0057] gi|215483461|ref|YP_002325678.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB307-0294] gi|301344714|ref|ZP_07225455.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB056] gi|301510320|ref|ZP_07235557.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB058] gi|301596302|ref|ZP_07241310.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB059] gi|169148931|emb|CAM86806.1| putative transport protein (ABC superfamily, membrane); putative nitrate ABC transporter, membrane [Acinetobacter baumannii AYE] gi|213056422|gb|ACJ41324.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii AB0057] gi|213986090|gb|ACJ56389.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter baumannii AB307-0294] Length = 284 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 20/259 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 F ++ N +++ +FW V G+A N T DV++ +W Sbjct: 20 FQQLRSYPAHLKNYAIAFTSIVFWIAVWQGLAQFKVNLGFVNFSNVPTPLDVIHALWTFF 79 Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + Sbjct: 80 QLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + + G + IL N + G A A S + Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +I+PG P +TG G W + +E+ S G+G + ES ++ Sbjct: 196 YEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249 Query: 555 VVLGVLIMCCFVLALNRFL 573 +V+G++++ + + + Sbjct: 250 IVVGMVLIGALGMFSSTLV 268 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 94/228 (41%), Gaps = 14/228 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +N+ P D++ + + + ++ + R++ V++ L LA Sbjct: 55 VNLGFVNFSNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 114 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + ++L L+P L++++ IP + ++ ++ F +E + IF F ++ + Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASMIFITFIGALFPIL 166 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S S + + +P ++P ++ + + M WF +V +E Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 MI GIG + + Q+ I+ M+ + + L+ Sbjct: 227 MISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTLV 268 >gi|306828147|ref|ZP_07461410.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Streptococcus pyogenes ATCC 10782] gi|304429684|gb|EFM32730.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Streptococcus pyogenes ATCC 10782] Length = 575 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 91.1 bits (225), Expect = 5e-16, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|167041505|gb|ABZ06255.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_007I05] Length = 631 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV + + + I +P+GI++G P +L P + PLV++ Sbjct: 440 SFLRVFLGLSLGIIFGVPLGIFMGLNRFAKGFFDPLVELYRPVPPLAWAPLVITVFGI-- 497 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N+ L+ ++ + AGAS A S + W+ R +I P P Sbjct: 498 --DNVGKVFLLFMVALSIMIISARAGASGTQLSKIHAAHSLGASRWQILRNVIFPNSLPE 555 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G W + +E + TTG+G + + + + + + +M Sbjct: 556 ILTGIRVAVGMCWGTLVAAEFLAG------TTGIGFVENVARKYMQYEVIWITIFVMGML 609 Query: 566 VLALN 570 L + Sbjct: 610 GLLFD 614 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 85/238 (35%), Gaps = 20/238 (8%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLP---QYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94 G E ++D+V + +P + + LR+ + + ++F +R Sbjct: 407 GTVEPNFKSKVLDVVTGKYEAFKIPVPTGHIWDSFLRVFLGLSLGIIFGVPLGIFMGLNR 466 Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 P++++ + +P L + + F GK +F +F + M S Sbjct: 467 FAKGFFDPLVELYRPVPPLAWAPLVITVFGIDNVGK--------VFLLFMVALSIMIISA 518 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 + S S WQ + P S+P ++ + +++ W +VA+E + Sbjct: 519 RAGASGTQLSKIHAAHSLGASRWQILRNVIFPNSLPEILTGIRVAVGMCWGTLVAAEFLA 578 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM---IVWSNK 269 GIG +A K I + M + L+D + + + I W K Sbjct: 579 GTT------GIGFVENVARKYMQYEVIWITIFVMGMLGLLFDLTIRKIIDKTIPWRGK 630 >gi|308186604|ref|YP_003930735.1| Nitrate transport permease protein nrtB [Pantoea vagans C9-1] gi|308057114|gb|ADO09286.1| Nitrate transport permease protein nrtB [Pantoea vagans C9-1] Length = 290 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 89/258 (34%), Gaps = 13/258 (5%) Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF 371 + K +R + + + + WQ+ + Sbjct: 25 IIPKAAVRPARLRPLLQRAIPAAGGLLLMLLVWQLAALSEPSFPSPYATWQAAQVLFADP 84 Query: 372 TYQDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 Y + + W ++ RV + +A+++ IP G +G ++ P LL Sbjct: 85 FYSNGPNDQGIGWNVLASLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPV 144 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 + P+ + + + + W ++ N G P D+ VA + Sbjct: 145 SPLAWLPIGLLLFQRAEPAASWT----IFICSIWPMIINTAEGVQRIPQDYLNVARVLQL 200 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + W R I+LP + P +TG + G AW + +E+ + G G+G +I Sbjct: 201 SEWTVMRRILLPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWN 254 Query: 549 KGSFPEVVLGVLIMCCFV 566 + +++ +LI+ Sbjct: 255 NLNVANILIAILIIGVVG 272 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 20/246 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINIL------LHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 +R P LL +LV + + + + + + Sbjct: 41 QRAIPAAGGLLLMLLVWQLAALSEPSFPSPYATWQAAQVLFADPFYSNGPNDQGIGWNVL 100 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++ L L + + + PI+ +++ + L +L ++ F Sbjct: 101 ASLQRVAIGFGLAALVGIPAGFLLGRFTFMARMFNPIIALLRPVSPLAWLPIGLLLFQRA 160 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P AA + IF +W M + + + IP+D V+R +LS W + +P Sbjct: 161 EP--------AASWTIFICSIWPMIINTAEGVQRIPQDYLNVARVLQLSEWTVMRRILLP 212 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +P ++ + +S+ W +VA+EM+ G GIG +I ++ IL A+L Sbjct: 213 AVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNVANILIAIL 266 Query: 247 TMLGVI 252 + V Sbjct: 267 IIGVVG 272 >gi|319745717|gb|EFV98014.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Streptococcus agalactiae ATCC 13813] Length = 575 Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ I + ++ +P + + L + T +L A +IS++ Sbjct: 54 LLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS ++ V+ PILD MQ++P +L V +F G V G + +FA+ Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ IP +L E S SF + QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L+++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L I + WQ + + + T V+V +I+ I Sbjct: 51 INPLLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + SF T + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271 >gi|33860929|ref|NP_892490.1| putative cyanate ABC transporter [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639661|emb|CAE18830.1| putative cyanate ABC transporter [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 260 Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 84/200 (42%), Gaps = 11/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + L + + I++ RV++ +A ++ IP+G+ +G S + P+ QLL + Sbjct: 61 PNDLGIGFNLLISLRRVLIGYSLAVLVAIPLGVLMGMSKLAQSSLNPYVQLLKPVSPLAW 120 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + N + ++ + W L N G ++ D+ V+ S + Sbjct: 121 LPVGLFVFR----NSEITGIFVIFITSIWPTLINTAFGVASINPDYLRVSKSLGASKSIT 176 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R +ILP I P + G + G AW + +E+ TG+G +I S Sbjct: 177 IRRVILPAIMPNILAGMRISMGTAWLVIVAAEMLLG-------TGIGYFIWNEWNNLSLE 229 Query: 554 EVVLGVLIMCCFVLALNRFL 573 + + ++I+ L++F Sbjct: 230 NIFVAIIIIGFTGFILDQFF 249 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 15/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+L +++L L S+ L P + +++ + L +L + F Sbjct: 70 LLISLRRVLIGYSLAVLVAIPLGVLMGMSKLAQSSLNPYVQLLKPVSPLAWLPVGLFVFR 129 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 N +E+ IF IF + +W + + +I D VS+S S + Sbjct: 130 N--------SEITGIFVIFITSIWPTLINTAFGVASINPDYLRVSKSLGASKSITIRRVI 181 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P MP ++ M +SM W +VA+EM++ GIG +I L I A Sbjct: 182 LPAIMPNILAGMRISMGTAWLVIVAAEMLLG-------TGIGYFIWNEWNNLSLENIFVA 234 Query: 245 MLTMLGVIFLYDQLL 259 ++ + F+ DQ Sbjct: 235 IIIIGFTGFILDQFF 249 >gi|313904100|ref|ZP_07837480.1| binding-protein-dependent transport systems inner membrane component [Eubacterium cellulosolvens 6] gi|313471249|gb|EFR66571.1| binding-protein-dependent transport systems inner membrane component [Eubacterium cellulosolvens 6] Length = 279 Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 91/233 (39%), Gaps = 12/233 (5%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV--LYVIWLGCITMFRVVVLIIIASII 400 L +FW + V + + ++ I++ RV++ +I+S++ Sbjct: 45 ALILFWVGAGAFGKLNTIVLPSFGTVVDTFWSGITSGQLLAALAISIRRVLLGYLISSVL 104 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 I +GI IG H Q+L P + PLV+ + + L+ G Sbjct: 105 GIVLGILIGLSRHAQRLTGLLIQVLRPIPPIAWIPLVILWMGIGENSK----VFLIFLGG 160 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 + +L NVI G EVA +++ +++P P TG A G W Sbjct: 161 FFTVLINVIDGIRYTDKKLTEVAWVMETPKFKYITRLVIPAALPSIFTGLKVALGSCWTC 220 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ + T+G+G I+ + G V++G+L + ++ L Sbjct: 221 VVAAELVA------STSGIGYMISNARNFGQMDVVIVGMLSIGLVGKLMDTIL 267 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 91/222 (40%), Gaps = 17/222 (7%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 +VD + L + + R+L +IS + V L SR + ++ ++ Sbjct: 70 VVDTFWSGITSGQLLAALAISIRRVLLGYLISSVLGIVLGILIGLSRHAQRLTGLLIQVL 129 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + IP + ++ +++ E + +F IF + + ++ + + L E Sbjct: 130 RPIPPIAWIPLVILWMGIG--------ENSKVFLIFLGGFFTVLINVIDGIRYTDKKLTE 181 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 V+ ++ L +P ++P + + +++ W VVA+E++ GIG Sbjct: 182 VAWVMETPKFKYITRLVIPAALPSIFTGLKVALGSCWTCVVAAELVA------STSGIGY 235 Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266 I+ A + ++ ML++ V L D +L + ++ W Sbjct: 236 MISNARNFGQMDVVIVGMLSIGLVGKLMDTILNAIGKRLLAW 277 >gi|146307132|ref|YP_001187597.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145575333|gb|ABP84865.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] Length = 283 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 13/217 (5%) Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 WQ+ + Y + + + W ++ RV V +A+++ IP+G IG ++ Sbjct: 66 TWQAALVLFADPFYDNGPNDMGIGWNILNSLGRVGVGFGLAALVGIPLGFAIGRFAFLAG 125 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + P LL + P+ + ++ + W I+ N AG ++ P Sbjct: 126 MLAPIISLLRPVSPLAWLPIGLLVFEAAG----PASIWVIFISSIWPIILNTAAGVASVP 181 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D+ VA ++ ++ I+ P + P+ +TG A G AW + +E+ + G Sbjct: 182 QDYLNVARVLKLSEFKVLTRILFPAVLPHLMTGIRLAIGVAWLVIVAAEMLTGG------ 235 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GLG ++ + + +++ ++I+ LAL + L Sbjct: 236 IGLGFWVWDEWNNLNVEHILIAIIIVGLVGLALEQTL 272 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 98/248 (39%), Gaps = 23/248 (9%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRM 72 LL + IG ++L + P + + + + R+ Sbjct: 40 LLGILAFIGFWSLLAQYSEGLPGPLSTWQAALVLFADPFYDNGPNDMGIGWNILNSLGRV 99 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 ++ L + L +L PI+ +++ + L +L ++ F P Sbjct: 100 GVGFGLAALVGIPLGFAIGRFAFLAGMLAPIISLLRPVSPLAWLPIGLLVFEAAGP---- 155 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 A+I+ IF S +W + + + ++P+D V+R +LS ++ + P +P L Sbjct: 156 ----ASIWVIFISSIWPIILNTAAGVASVPQDYLNVARVLKLSEFKVLTRILFPAVLPHL 211 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + + +++ W +VA+EM+ G G+G ++ ++ IL A++ + V Sbjct: 212 MTGIRLAIGVAWLVIVAAEMLTGGI------GLGFWVWDEWNNLNVEHILIAIIIVGLVG 265 Query: 253 FLYDQLLF 260 +Q L Sbjct: 266 LALEQTLL 273 >gi|91788795|ref|YP_549747.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] gi|91698020|gb|ABE44849.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] Length = 252 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 11/248 (4%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 E + + V L W+ +V I + + + ++F Sbjct: 2 EKLKNILAPLAVLVALIACWWVIVLQTESVIFPTPLQVVTGTMELVADGTLWEHIGASLF 61 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV + A+++ +P+G+W+G + P Q+L + PL + +++P Sbjct: 62 RVGTGFLSATLVALPMGLWMGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGNVSP 121 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L+ + + ++ AG + A +F ++ + +R +I+P + P + Sbjct: 122 ----IFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPEIIV 177 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS-FPEVVLGVLIMCCFVL 567 G G AW + +E+ + +GLG I +S G+ + V+ ++I+ L Sbjct: 178 GMRIGLGVAWLVVVAAEMIALR------SGLGYLIMDSRNAGNRYDLVIASMVIIGVIGL 231 Query: 568 ALNRFLWH 575 L+ + Sbjct: 232 LLDGTMRR 239 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 104/263 (39%), Gaps = 16/263 (6%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 + I + L+A + +I + + T P +V + +L ++ + R+ Sbjct: 5 KNILAPLAVLVALIACWWVIVLQTESVIFPT-PLQVVTGTMELVADGTLWEHIGASLFRV 63 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 + + + L + L PI I++ I + ++ +++F Sbjct: 64 GTGFLSATLVALPMGLWMGRVEGAYRTLNPIFQILRPISPIAWIPLAILWFGVGN----- 118 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 ++ IF IF + V+ M + I R + +F +S + F + +P +P + Sbjct: 119 ---VSPIFLIFIASVFPMIVQTAAGVHTIERRYLRAADNFGVSRYTLFRQVIIPAVLPEI 175 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD-LLAILYAMLTMLGV 251 + M + + W VVA+EMI + G+G I + + ++ +M+ + + Sbjct: 176 IVGMRIGLGVAWLVVVAAEMIAL------RSGLGYLIMDSRNAGNRYDLVIASMVIIGVI 229 Query: 252 IFLYDQLLFRPMIVWSNKFRLER 274 L D + R + S ++R R Sbjct: 230 GLLLDGTMRRLEGLKSIRWRYGR 252 >gi|255261600|ref|ZP_05340942.1| taurine ABC transporter, permease protein [Thalassiobium sp. R2A62] gi|255103935|gb|EET46609.1| taurine ABC transporter, permease protein [Thalassiobium sp. R2A62] Length = 420 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 15/202 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRVVV ++I IP+G +G P + + P PLV+ Sbjct: 227 GYSLFRVVVGFFFGALIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVIIWFGI 286 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+ W + +G S A S + W+ R++I+P Sbjct: 287 GESGK----IILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKWQLMRHVIIPNSL 342 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TGA A G W + +E+ + + G G I + + + V++G++++ Sbjct: 343 PEIFTGARVAMGVCWGTVVAAELVA------ASQGAGMMIMTAAKFQNTDIVIMGIILIG 396 Query: 564 CFVLALNRFLWHPLYLYGTRCL 585 ++ + Y R L Sbjct: 397 VIGFGIDMLM-----RYAERLL 413 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 82/213 (38%), Gaps = 17/213 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL ++ + R++ L S PI++ M+ +P L + Sbjct: 221 SLWEHLGYSLFRVVVGFFFGALIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLV 280 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W M + + + + S S WQ Sbjct: 281 IIWFGIGESGK--------IILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKWQL 332 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 ++ +P S+P + ++M W VVA+E++ G G I A K Q+ Sbjct: 333 MRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAASQ------GAGMMIMTAAKFQNTD 386 Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 ++ ++ + + F D L+ R ++ W K Sbjct: 387 IVIMGIILIGVIGFGIDMLMRYAERLLVPWKGK 419 >gi|77409771|ref|ZP_00786425.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77171620|gb|EAO74835.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 575 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ I + ++ +P + + L + T +L A +IS++ Sbjct: 54 LLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS ++ V+ PILD MQ++P +L V +F G V G + +FA+ Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ IP +L E S SF + QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L+++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L I + WQ + + + T V+V +I+ I Sbjct: 51 INPLLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + SF T + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271 >gi|170017667|ref|YP_001728586.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc citreum KM20] gi|169804524|gb|ACA83142.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc citreum KM20] Length = 568 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 18/240 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMVI 78 L+A + + I I L I T + L + +L T ++ A VI Sbjct: 46 LVAVPMPLMIAGITLIAILTTPKKYGFPLFTFVGLAIIANQNLWDDLMSTLTLVIMASVI 105 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 SL+ + AKS + V+ PILD MQ++P +L V +F G V G + Sbjct: 106 SLVIGIPLGIITAKSPKTAAVVKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASI 162 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFA + M + +P L E + SF + WQK L +P + ++ Sbjct: 163 IFA-----LPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNTILAGANQ 217 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 ++ VV + MI PG+G + A++ ++ + L ++ + + D+ Sbjct: 218 TIMLALSMVVTASMI-------GAPGLGRGVLSAVQHANIGSGFVNGLGLVILAIIIDRF 270 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 11/187 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V++ +I+ +I IP+GI P ++ ++P + P V+ V+ Sbjct: 95 TLTLVIMASVISLVIGIPLGIITAKSPKTAAVVKPILDFMQTMPGFVYLIPAVAFFGIGV 154 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + ++ G P E A SF T W+ + LP Sbjct: 155 VPGVFASIIF----ALPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNT 210 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + GA A + + + + GLG + + + + + L + Sbjct: 211 ILAGANQTIMLALSMVVTASMIG-------APGLGRGVLSAVQHANIGSGFVNGLGLVIL 263 Query: 566 VLALNRF 572 + ++RF Sbjct: 264 AIIIDRF 270 >gi|227432669|ref|ZP_03914642.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351551|gb|EEJ41804.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 573 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++IGI I + + + + + L T ++ A ++SL+ Sbjct: 58 LMIIGITVIAIVTTPKKIGFPLFTLLGLLLIANQGLWSDLMNTVTLVIMASIVSLIIGIP 117 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L AKS++ +V+ PILD MQ++P +L V +F G V G + IFA Sbjct: 118 LGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASIIFA---- 170 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + M + +P DL E + SF + WQK + L +P + ++ ++ Sbjct: 171 -LPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNTILAGANQTIMLALS 229 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ D+ + L ++ + + D+ Sbjct: 230 MVVTASMI-------GAPGLGRGVLSAVQHADVGSGFVNGLGLVILAIVIDRF 275 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 11/187 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V++ I++ II IP+GI + +QP + P V+ V+ Sbjct: 100 TVTLVIMASIVSLIIGIPLGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFGIGV 159 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + ++ G P D E A SF T W+ + LP Sbjct: 160 VPGVFASIIF----ALPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNT 215 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + GA A + + + + GLG + + + + L + Sbjct: 216 ILAGANQTIMLALSMVVTASMIG-------APGLGRGVLSAVQHADVGSGFVNGLGLVIL 268 Query: 566 VLALNRF 572 + ++RF Sbjct: 269 AIVIDRF 275 >gi|116617483|ref|YP_817854.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096330|gb|ABJ61481.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 571 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++IGI I + + + + + L T ++ A ++SL+ Sbjct: 56 LMIIGITVIAIVTTPKKIGFPLFTLLGLLLIANQGLWSDLMNTVTLVIMASIVSLIIGIP 115 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L AKS++ +V+ PILD MQ++P +L V +F G V G + IFA Sbjct: 116 LGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASIIFA---- 168 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + M + +P DL E + SF + WQK + L +P + ++ ++ Sbjct: 169 -LPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNTILAGANQTIMLALS 227 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ D+ + L ++ + + D+ Sbjct: 228 MVVTASMI-------GAPGLGRGVLSAVQHADVGSGFVNGLGLVILAIVIDRF 273 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 11/187 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V++ I++ II IP+GI + +QP + P V+ V+ Sbjct: 98 TVTLVIMASIVSLIIGIPLGILTAKSQKTAVVVQPILDFMQTMPGFVYLIPAVAFFGIGV 157 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + ++ G P D E A SF T W+ + LP Sbjct: 158 VPGVFASIIF----ALPPMVRMTSLGIRQVPVDLVEAADSFGSTTWQKLFKLELPSAKNT 213 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + GA A + + + + GLG + + + + L + Sbjct: 214 ILAGANQTIMLALSMVVTASMIG-------APGLGRGVLSAVQHADVGSGFVNGLGLVIL 266 Query: 566 VLALNRF 572 + ++RF Sbjct: 267 AIVIDRF 273 >gi|110638367|ref|YP_678576.1| nitrate ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110281048|gb|ABG59234.1| nitrate ABC transporter, permease component [Cytophaga hutchinsonii ATCC 33406] Length = 377 Score = 143 bits (362), Expect = 6e-32, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 86/213 (40%), Gaps = 14/213 (6%) Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + Y + ++ V ++++ I IP+GI +G + + I Q+L Sbjct: 162 SEIRYTGRPSFVDQIGTSLKTVFAGVLLSMFIAIPIGILLGLSETLRTSINWLIQILKPV 221 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ-----WYILFNVIAGASAFPNDFKEVA 483 V+ LV + + + S L+ F + W L N G ++ D+ V+ Sbjct: 222 SPVVWLLLVSMVIKTLLTDSTMDKSFLISFISVGLCGMWATLVNTSMGVASVDKDYINVS 281 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + W+ I+LP FP TG +W I E+ + ++ GLG+++ Sbjct: 282 KVLRLNVWKNIYKIVLPSSFPLIFTGIRITVSVSWMVLIAIELLA------QSPGLGSFV 335 Query: 544 AESTEKGSFP---EVVLGVLIMCCFVLALNRFL 573 E + G+ ++++ + ++ L++ + Sbjct: 336 WEQFQNGANDSNAKILVAMFVIGGIGFLLDKIM 368 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 85/196 (43%), Gaps = 10/196 (5%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + + +++S+ L S L + ++ I++ + + +L + L Sbjct: 179 SLKTVFAGVLLSMFIAIPIGILLGLSETLRTSINWLIQILKPVSPVVWLLLVSMVIKTLL 238 Query: 128 PGKVI-GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 + + L + ++ +W + + ++ +D VS+ RL+ W+ + + +P Sbjct: 239 TDSTMDKSFLISFISVGLCGMWATLVNTSMGVASVDKDYINVSKVLRLNVWKNIYKIVLP 298 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ---DLLAILY 243 S P + + +++S W ++A E++ PG+GS++ + IL Sbjct: 299 SSFPLIFTGIRITVSVSWMVLIAIELLA------QSPGLGSFVWEQFQNGANDSNAKILV 352 Query: 244 AMLTMLGVIFLYDQLL 259 AM + G+ FL D+++ Sbjct: 353 AMFVIGGIGFLLDKIM 368 >gi|153006707|ref|YP_001381032.1| binding-protein-dependent transport systems inner membrane component [Anaeromyxobacter sp. Fw109-5] gi|152030280|gb|ABS28048.1| binding-protein-dependent transport systems inner membrane component [Anaeromyxobacter sp. Fw109-5] Length = 274 Score = 143 bits (362), Expect = 6e-32, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 101/266 (37%), Gaps = 18/266 (6%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 L + + + + + +S + + + + W + + + Sbjct: 3 LRSQAIRLARQLLVPAIVIAAWEGISRAGWVSPIVLPAPSQVLLRWIDYARPLAPYDPAE 62 Query: 376 VLYVIWL--------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + W+ ++ RV + +++ +P+G+ +G +P + + P Q+L Sbjct: 63 GSRLAWIFSGELPHDALASLIRVAGGFALGAVLALPLGLLMGAKPMVYELMNPLVQILRP 122 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P + PL + N L+ G + IL N IAG + A + Sbjct: 123 IPPIAYIPLAILWFGLG----NPPAFFLISLGAFFPILMNTIAGVRNVDAIYLRAAKNLG 178 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + W + I++P PY + G G A+ IV+E+ + +GLG I E+ Sbjct: 179 ASEWTLFWRIMIPAAMPYILAGVRIGIGVAFIVVIVAEMIA------VNSGLGYRILEAR 232 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573 E +V+ G++ + L ++ F+ Sbjct: 233 EYFWSDKVIAGMISIGLAGLGIDFFM 258 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 90/240 (37%), Gaps = 18/240 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81 +V+ + +L + P D + + LP A + +R+ + + Sbjct: 35 PIVLPAPSQVLLRWIDYARPLAPYDPAEGSRLAWIFSGELPHDALASLIRVAGGFALGAV 94 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 L + ++ P++ I++ IP + ++ +++F P A F Sbjct: 95 LALPLGLLMGAKPMVYELMNPLVQILRPIPPIAYIPLAILWFGLGNPP--------AFFL 146 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + N+ +++ S W FW + +P +MP ++ + + + Sbjct: 147 ISLGAFFPILMNTIAGVRNVDAIYLRAAKNLGASEWTLFWRIMIPAAMPYILAGVRIGIG 206 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + V+ +EMI V G+G I A + ++ M+++ D + R Sbjct: 207 VAFIVVIVAEMIAVNS------GLGYRILEAREYFWSDKVIAGMISIGLAGLGIDFFMNR 260 >gi|225628474|ref|ZP_03786508.1| ABC transporter related protein [Brucella ceti str. Cudo] gi|225616320|gb|EEH13368.1| ABC transporter related protein [Brucella ceti str. Cudo] Length = 510 Score = 143 bits (362), Expect = 7e-32, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 86/250 (34%), Gaps = 13/250 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +S+ + I + ++ + + + T ++ ++ RV+ ++ Sbjct: 13 LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVG +G+ S I+P+ Q P PL + + ++ Sbjct: 73 LAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + G + A + +I+P P+ + G G AW Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576 + +E+ + +GLG + ++ P + + ++ + L ++R L Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242 Query: 577 LYLYGTRCLR 586 L + R + Sbjct: 243 LTQWQERAWK 252 Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 18/254 (7%) Query: 20 FDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 +LL+F + IG +L G P D+++ L L + R+LS V+ Sbjct: 10 LNLLSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVL 69 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L R ++ P + + IP L + +V E Sbjct: 70 GVALAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPK 121 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF IF + + + YQ + ++ R L +R F + VP S+P ++ + + Sbjct: 122 IFVIFLASFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRI 181 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + W VVA+E+I G+G + A DL I +++T+ + D+L Sbjct: 182 GLGSAWATVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRL 235 Query: 259 LF---RPMIVWSNK 269 L R + W + Sbjct: 236 LQAADRRLTQWQER 249 >gi|19745348|ref|NP_606484.1| glycine-betaine binding permease protein [Streptococcus pyogenes MGAS8232] gi|19747452|gb|AAL96983.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS8232] Length = 575 Score = 143 bits (362), Expect = 7e-32, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|158422309|ref|YP_001523601.1| nitrate transporter component [Azorhizobium caulinodans ORS 571] gi|158329198|dbj|BAF86683.1| nitrate transporter component [Azorhizobium caulinodans ORS 571] Length = 302 Score = 143 bits (362), Expect = 7e-32, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 80/200 (40%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + +++ RV V +A+++ + G IG + P Q+L P Sbjct: 99 PQDIGLGLRVLVSLQRVAVGFGLAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLA- 157 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 + + N ++ + W I+ N G P D++ VA + + Sbjct: 158 ---WLPLALAAFRDSNPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEF 214 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I+LP PY TG G +W A + +E+ + G G+G +I ++ P Sbjct: 215 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGG------VGIGFFIWDAWNSSRLP 268 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++++ ++ + L+R + Sbjct: 269 DIIVALVYIGVVGFVLDRLV 288 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R+ ++ + + L +S L PI +++++P L +L Sbjct: 103 GLGLRVLVSLQRVAVGFGLAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLAWLPLA 162 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + P +AIF IF + +W + + + NIP+D V++ RL+ + Sbjct: 163 LAAFRDSNP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEF 214 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW + +P + P + + + + W +VA+EM+ G GIG +I A L Sbjct: 215 FWKIMLPSAAPYIFTGLRIGVGLSWLAIVAAEMLTGGV------GIGFFIWDAWNSSRLP 268 Query: 240 AILYAMLTMLGVIFLYDQLL 259 I+ A++ + V F+ D+L+ Sbjct: 269 DIIVALVYIGVVGFVLDRLV 288 >gi|307130433|ref|YP_003882449.1| alkanesulfonates transport system permease [Dickeya dadantii 3937] gi|306527962|gb|ADM97892.1| Alkanesulfonates transport system permease protein [Dickeya dadantii 3937] Length = 569 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 88/566 (15%), Positives = 185/566 (32%), Gaps = 71/566 (12%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 L P ++R I + LA +L+ + + L + V I+L L Sbjct: 57 LTPRLTRHIVAPLLLPLAVLLLWSLSSTLGWMPPQILPAPSRVVTTAISLLQGDLLSQLL 116 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R++S + +L + L S R +L P + + IP LG++ +V F Sbjct: 117 ISLHRLVSGLAAGVLAGTLLGALMGASVRAERLLYPTVYALAQIPTLGWIPLFMVLFGID 176 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 K+ + + + +T + + ++P L +V+R+ RL + L +P Sbjct: 177 DGLKLA--------VLIKAVIVPVTLHSQRGVRDVPPALLDVARTLRLPRLTRLTRLTLP 228 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++P + +++S W ++ E++ GIG + + L +L + Sbjct: 229 SALPVWFTGLRLALSQAWVSLIVVELLASSQ------GIGYLMVWGRQLFQLDIVLVCIA 282 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 + +L + T + + Sbjct: 283 VIGLTG--------------------------------LLMEWGITQLDQRL-------- 302 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 ++ + R + L W + G +I + Sbjct: 303 --IAWPHPPVGRLHAAPVGQSIGLAVPLLLLALWQLASHHGWVDALLLPPPGEVLHAIWH 360 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 V+ + D + +++R +V + + G+ +G + P LL Sbjct: 361 GVSDGSLPDAMRH------SLWRALVGGALGVSAGLLAGLALGLSTRAEAVFTPTLTLLR 414 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 + PL+ + V N + + + +L G +EVA Sbjct: 415 QVALFAWLPLITAWVG----NDDGGKVTFIALVAFFPMLVATHRGVRQRSLALQEVAQVL 470 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + + R +ILPG P TG A AW +I +E G+G+ + + Sbjct: 471 RLPWFHRLRRLILPGAAPALFTGLRLAMIYAWLGAIGAEYFMSSG-----AGIGSLMINA 525 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRF 572 + P ++ G+L++ + Sbjct: 526 QQLLDMPIILSGMLLIGVTGALFDHL 551 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 87/228 (38%), Gaps = 16/228 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +++ + + SLP + R L + + + S R V Sbjct: 348 LPPPGEVLHAIWHGVSDGSLPDAMRHSLWRALVGGALGVSAGLLAGLALGLSTRAEAVFT 407 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L +++ + + +L + N GKV L A F M + ++ + Sbjct: 408 PTLTLLRQVALFAWLPLITAWVGNDDGGKVTFIALVAFF--------PMLVATHRGVRQR 459 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L+EV++ RL + + L +P + P L + ++M W + +E + Sbjct: 460 SLALQEVAQVLRLPWFHRLRRLILPGAAPALFTGLRLAMIYAWLGAIGAEYFMSSGA--- 516 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266 GIGS + A + D+ IL ML + L+D L L + M W Sbjct: 517 --GIGSLMINAQQLLDMPIILSGMLLIGVTGALFDHLGQRLEQRMTRW 562 >gi|242239916|ref|YP_002988097.1| nitrate ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242131973|gb|ACS86275.1| nitrate ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 304 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 13/212 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 WQ+ + Y + + W ++ RV V +A+++ IP G IG + Sbjct: 84 WQTWQAALTLFADPFYVAGPNDQGIGWNVLASIRRVAVGFGLAALVGIPAGFLIGRFRFM 143 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ P LL + P+ + + + + W ++ N G Sbjct: 144 AAMFNPLIALLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 199 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ + I+LP + P +TG + G AW + +E+ + G Sbjct: 200 IPQDYLNVARVLRLSEFTIMYKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGG---- 255 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G+G +I + P +++ + I+ Sbjct: 256 --VGIGFWIWNEWNNLNVPNIIIAIFIIGVVG 285 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 83/196 (42%), Gaps = 14/196 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 + + + R+ ++ L L + R + + P++ +++ + L +L Sbjct: 104 NDQGIGWNVLASIRRVAVGFGLAALVGIPAGFLIGRFRFMAAMFNPLIALLRPVSPLAWL 163 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F P A+ + IF +W M + + + IP+D V+R RLS Sbjct: 164 PIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLRLSE 215 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + + + +P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 216 FTIMYKILLPAVLPSVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNL 269 Query: 237 DLLAILYAMLTMLGVI 252 ++ I+ A+ + V Sbjct: 270 NVPNIIIAIFIIGVVG 285 >gi|330503532|ref|YP_004380401.1| nitrate ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328917818|gb|AEB58649.1| nitrate ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 264 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 13/217 (5%) Query: 360 AWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 WQ+ + Y + + + W ++ RV V +A+++ IP+G IG ++ Sbjct: 47 TWQAALVLFADPFYDNGPNDMGIGWNILNSLGRVGVGFGLAALVGIPLGFAIGRFAFLAG 106 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 + P LL + P+ + ++ + W I+ N AG ++ P Sbjct: 107 MLAPIISLLRPVSPLAWLPIGLLVFEAAG----PASIWVIFISSIWPIILNTAAGVASVP 162 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D+ VA ++ + I+ P + P+ +TG A G AW + +E+ + G Sbjct: 163 QDYLNVARVLKLSECKVLTRILFPAVLPHLMTGIRLAIGVAWLVIVAAEMLTGG------ 216 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GLG ++ + + +++ ++I+ LAL + L Sbjct: 217 IGLGFWVWDEWNNLNVEHILIAIIIVGLVGLALEQML 253 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 98/248 (39%), Gaps = 23/248 (9%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---------DVHSLPQYASRTTLRM 72 LL + IG ++L + P + + + + R+ Sbjct: 21 LLGILAFIGFWSLLAQYSEGLPGPLSTWQAALVLFADPFYDNGPNDMGIGWNILNSLGRV 80 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 ++ L + L +L PI+ +++ + L +L ++ F P Sbjct: 81 GVGFGLAALVGIPLGFAIGRFAFLAGMLAPIISLLRPVSPLAWLPIGLLVFEAAGP---- 136 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 A+I+ IF S +W + + + ++P+D V+R +LS + + P +P L Sbjct: 137 ----ASIWVIFISSIWPIILNTAAGVASVPQDYLNVARVLKLSECKVLTRILFPAVLPHL 192 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + + +++ W +VA+EM+ G G+G ++ ++ IL A++ + V Sbjct: 193 MTGIRLAIGVAWLVIVAAEMLTGGI------GLGFWVWDEWNNLNVEHILIAIIIVGLVG 246 Query: 253 FLYDQLLF 260 +Q+L Sbjct: 247 LALEQMLL 254 >gi|94989669|ref|YP_597769.1| glycine betaine-binding protein / glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10270] gi|94543177|gb|ABF33225.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10270] Length = 575 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 90.0 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|270262342|ref|ZP_06190614.1| transporter [Serratia odorifera 4Rx13] gi|270044218|gb|EFA17310.1| transporter [Serratia odorifera 4Rx13] Length = 294 Score = 143 bits (361), Expect = 9e-32, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 86/262 (32%), Gaps = 17/262 (6%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 I + PL + F + ++ + W Sbjct: 10 IPTPTRAEVVPLKIPAPPKPQPKARWSLPLQNAFRRAVPAALGLVLILVVWQIAALNSKG 69 Query: 358 G----IAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 WQ+ + Y + + W ++ RV +A+++ IP G +G Sbjct: 70 FPTPVATWQAALTLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLAALVGIPAGFLLGR 129 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +++ + P LL + P+ + + + W ++ N Sbjct: 130 FAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASTWT----IFICSIWPMILNTAE 185 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G + P D+ VA ++ W R I+ P + PY +TG + G AW + +E+ + G Sbjct: 186 GVARIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVIVAAEMLTGG 245 Query: 531 HIHLRTTGLGAYIAESTEKGSF 552 G+G +I + Sbjct: 246 ------VGIGFWIWNEWNNLNV 261 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 20/232 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYAS 66 RR P L+ ++V I + G + + + + Sbjct: 44 RRAVPAALGLVLILVVWQIAALNSKGFPTPVATWQAALTLFADPFYSAGPNDQGIGWNVL 103 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ + ++ L L + L +L PI+ +++ + L +L ++ F Sbjct: 104 ASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRA 163 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P A+ + IF +W M + + + IP+D V+R +LS W + P Sbjct: 164 EP--------ASTWTIFICSIWPMILNTAEGVARIPQDYLNVARVLKLSEWTVMRKILFP 215 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 216 AVLPYVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLNV 261 >gi|94993560|ref|YP_601658.1| glycine betaine-binding protein / glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10750] gi|94547068|gb|ABF37114.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus pyogenes MGAS10750] Length = 575 Score = 143 bits (361), Expect = 9e-32, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|71909972|ref|YP_281522.1| glycine betaine-binding protein/glycine betaine transporter permease [Streptococcus pyogenes MGAS5005] gi|71852754|gb|AAZ50777.1| glycine betaine-binding protein/glycine betaine transport system permease protein [Streptococcus pyogenes MGAS5005] Length = 575 Score = 143 bits (361), Expect = 9e-32, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|158423902|ref|YP_001525194.1| ABC-type nitrate/sulfonate/bicarbonate transport permease [Azorhizobium caulinodans ORS 571] gi|158330791|dbj|BAF88276.1| ABC-type nitrate/sulfonate/bicarbonate transport permease [Azorhizobium caulinodans ORS 571] Length = 273 Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ RV+V + IA + +PVG+ +G + P Q L + P+ V Sbjct: 82 LVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAFQFLRMISPLSWMPIAVMVFGV 141 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+ F T W IL AG + V+ S TGW +ILP I Sbjct: 142 GDA----PIYFLLAFATVWPILLATAAGVRQIDPQWLLVSRSLAATGWETLSRVILPAIL 197 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + +TG A G AW + E+ + GLG +I ++ ++ ++PE++ +L++ Sbjct: 198 GHVLTGVRLAIGIAWIVLVPCEMLG------VSAGLGYFILDTRDRLAYPELMATILVIG 251 Query: 564 CFVLALN 570 AL+ Sbjct: 252 IIGFALD 258 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 14/218 (6%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 + P + + L LP + R+L + I+L L SR+ Sbjct: 55 FAQKFSPTTALPALWRLLLQSDLPLNILVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEA 114 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 P ++ I L ++ V+ F + F + + VW + + + Sbjct: 115 ATTPAFQFLRMISPLSWMPIAVMVFGVG--------DAPIYFLLAFATVWPILLATAAGV 166 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 I VSRS +GW+ + +P + ++ + +++ W +V EM+ V Sbjct: 167 RQIDPQWLLVSRSLAATGWETLSRVILPAILGHVLTGVRLAIGIAWIVLVPCEMLGVSA- 225 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 G+G +I ++ +L + + F D Sbjct: 226 -----GLGYFILDTRDRLAYPELMATILVIGIIGFALD 258 >gi|26986952|ref|NP_742377.1| nitrate ABC transporter, permease protein, putative [Pseudomonas putida KT2440] gi|24981564|gb|AAN65841.1|AE016212_7 nitrate ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 260 Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 99/256 (38%), Gaps = 21/256 (8%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 F Q+ +N ++ L F + + AWQ + ++ ++ RV Sbjct: 21 FWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLT----------SSTLLAHLGSSLARV 70 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 A+++ + +G+ IG + P ++L PA + PL + L+ Sbjct: 71 FAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELS--- 127 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 + + G + IL N + G A A S W R ++LPG P VTG Sbjct: 128 -MVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGL 186 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G +W + +E+ S G+G Y ES ++P++V+G+L++ + + Sbjct: 187 AIGMGTSWFCLVTAEMISG------QFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSS 240 Query: 571 RFLWHPLYLYGTRCLR 586 + L T R Sbjct: 241 ALV-KRLGALATPWYR 255 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 89/219 (40%), Gaps = 14/219 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P+ ++D L +L + + R+ + + L L +S+ L+P Sbjct: 41 PTPKAVLDAAWQLLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLP 100 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L++++ IP + ++ ++ F +EL+ +F FT ++ + + + + Sbjct: 101 PLEVLRPIPAVAWIPLAILMF--------PSSELSMVFITFTGALFPILLNTVHGVEAVD 152 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L +RS W + +P ++P +V + + M WF +V +EMI Sbjct: 153 PRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMISG------Q 206 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GIG Y + Q+ I+ ML + + L+ R Sbjct: 207 FGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSALVKR 245 >gi|118592851|ref|ZP_01550240.1| Binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] gi|118434621|gb|EAV41273.1| Binding-protein-dependent transport systems inner membrane component [Stappia aggregata IAM 12614] Length = 319 Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 13/203 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++M R+++ I A++I I G+ +G I S I P+ ++L PA + PL + Sbjct: 125 AVSMQRILIGYITAAVIGILAGVLMGRSKLIRSLIYPYIEVLRPIPAVAWIPLAILMWPT 184 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + + + G + I+ N + G P A S + + + ++ILP Sbjct: 185 EEAS----IIYITLLGALFPIVLNTLHGVEQTPEVLVRAAKSLGASRLQIFWHVILPAAL 240 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G G +W + + E+ S + G+G + + ++P++V+G+L++ Sbjct: 241 PSIAAGLAIGMGVSWFSLLAGEIISGQY------GIGYFTWNAYSLINYPDIVVGMLVIG 294 Query: 564 CFVLALN---RFLWHPLYLYGTR 583 R PL + R Sbjct: 295 GLGTLSTYAVRLAMQPLLAWQKR 317 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 95/240 (39%), Gaps = 17/240 (7%) Query: 35 LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94 + P + L + + + R+L + + + + L +S+ Sbjct: 94 FYINFENIPSPEKVFTAFWTHLGETDFYIHIAVSMQRILIGYITAAVIGILAGVLMGRSK 153 Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 + ++ P +++++ IP + ++ ++ + E + I+ ++ + + Sbjct: 154 LIRSLIYPYIEVLRPIPAVAWIPLAILMW--------PTEEASIIYITLLGALFPIVLNT 205 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 + P L ++S S Q FW++ +P ++P + + + M WF ++A E+I Sbjct: 206 LHGVEQTPEVLVRAAKSLGASRLQIFWHVILPAALPSIAAGLAIGMGVSWFSLLAGEIIS 265 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWSNKFR 271 GIG + A + I+ ML + G+ L +L +P++ W + R Sbjct: 266 G------QYGIGYFTWNAYSLINYPDIVVGMLVIGGLGTLSTYAVRLAMQPLLAWQKRAR 319 >gi|22537935|ref|NP_688786.1| amino acid ABC transporter permease [Streptococcus agalactiae 2603V/R] gi|76798898|ref|ZP_00781104.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|22534834|gb|AAN00659.1|AE014273_6 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76585744|gb|EAO62296.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] Length = 575 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ I + ++ +P + + L + T +L A +IS++ Sbjct: 54 LLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS ++ V+ PILD MQ++P +L V +F G V G + +FA+ Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ IP +L E S SF + QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTVKQKLFKVELPLAKNTIMAGINQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L+++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272 Score = 87.7 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L I + WQ + + + T V+V +I+ I Sbjct: 51 INPLLFIVLITIAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + SF T + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTVKQKLFKVELPLAKNTIMAGINQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271 >gi|257885408|ref|ZP_05665061.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,501] gi|257821264|gb|EEV48394.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,501] Length = 571 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F+L++ + + + ++ + I L T +L + VIS++ Sbjct: 51 LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 108 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 109 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 165 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P++L E S SF + QK + L +P + ++ + + Sbjct: 166 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 220 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + + ++ + + D+ Sbjct: 221 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 268 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 77 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 129 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 130 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 185 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 186 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 238 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 239 VLSALQRAQVGNGFVNGVALVILAIIIDRF 268 >gi|115523285|ref|YP_780196.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] gi|115517232|gb|ABJ05216.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] Length = 299 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 23/264 (8%) Query: 4 YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV----- 58 Y L ++ R+ P + ++ +++ +I G + D + D Sbjct: 37 YGKLAREVAARVIPPLIVIVFSMVIWELICRRT-GSTLPPPSKVYSDTKELIFDPFFDRG 95 Query: 59 ---HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L + S + R+ ++ + L +S L PI ++++IP L + Sbjct: 96 GIDKGLFWHLSASLQRVAFGYSLAAVAGIGLGVLVGQSVWAMRGLDPIFQVLRTIPPLAW 155 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L + F + P +AIF IF + +W + + + NIP+D V+ RL+ Sbjct: 156 LPLALAAFRDGQP--------SAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLN 207 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + FW + +P + P + + + + W ++A+EM++ G GIG +I A Sbjct: 208 PLEFFWKIMLPSAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV------GIGFFIWDAWNS 261 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + I+ A+ + + F+ D+ + Sbjct: 262 SHISEIILALFYVGIIGFVLDRAI 285 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 76/195 (38%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV +A++ I +G+ +G + P Q+L P + Sbjct: 101 LFWHLSASLQRVAFGYSLAAVAGIGLGVLVGQSVWAMRGLDPIFQVLRTIPPLA----WL 156 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ + W I+ N G P D++ VA+ + ++ I+ Sbjct: 157 PLALAAFRDGQPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAAVVRLNPLEFFWKIM 216 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY TG G +W A I +E+ G G+G +I ++ E++L Sbjct: 217 LPSAAPYIFTGLRIGVGLSWLAIIAAEMLIGG------VGIGFFIWDAWNSSHISEIILA 270 Query: 559 VLIMCCFVLALNRFL 573 + + L+R + Sbjct: 271 LFYVGIIGFVLDRAI 285 >gi|152981435|ref|YP_001354775.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] gi|151281512|gb|ABR89922.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] Length = 276 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV A+++ IP+G+ IG I + P QLL P + PL + Sbjct: 83 SVTRVYGGFFAAALVGIPLGLLIGRIKVIRDLLDPTLQLLRPVPVTAWLPLSMIFFGIGP 142 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ G + I+FN G A N E A G +R ++LP P Sbjct: 143 N----AAIFLVFLGAFYPIVFNTTFGVKAVDNRLFEAALMLGCNGSSLFRQVVLPAAMPS 198 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G G AW +V E+ GLGA I + V+ G++++ Sbjct: 199 ILNGLRLGHGFAWILIVVGEM------TGVPEGLGAVIMDGRMLSRTDLVIAGMVVIGIV 252 Query: 566 VLALNRFL 573 + +R L Sbjct: 253 GYSTDRIL 260 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +LP + ++ R+ + L L + + + +L P L +++ +P+ +L + Sbjct: 75 TLPLHLWKSVTRVYGGFFAAALVGIPLGLLIGRIKVIRDLLDPTLQLLRPVPVTAWLPLS 134 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F AAIF +F + + F+ + + L E + +G Sbjct: 135 MIFFGIG--------PNAAIFLVFLGAFYPIVFNTTFGVKAVDNRLFEAALMLGCNGSSL 186 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P +MP ++ + + W +V EM V + G+G+ I Sbjct: 187 FRQVVLPAAMPSILNGLRLGHGFAWILIVVGEMTGVPE------GLGAVIMDGRMLSRTD 240 Query: 240 AILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268 ++ M+ + V + D++L ++ WS Sbjct: 241 LVIAGMVVIGIVGYSTDRILVAINNYLLKWSP 272 >gi|322412777|gb|EFY03685.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 575 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F +V+ + ++ +P + + L + T +L A +IS+L Sbjct: 54 LFFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQG-LWEQLINTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + V+ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 16/230 (6%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWI 402 F +V A + + FT+ +L++ G T V+V +I+ +I I Sbjct: 54 LFFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQGLWEQLINTFTLVLVASLISVLIGI 113 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + P + PA V+ V+ + + Sbjct: 114 PLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 169 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + +F TG + + LP + G A + + Sbjct: 170 PTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALSMVV 229 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + GLG + + + + L + + L+R Sbjct: 230 TGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|69245959|ref|ZP_00603731.1| Binding-protein-dependent transport systems inner membrane component:Substrate-binding region of ABC-type glycine betaine transport system [Enterococcus faecium DO] gi|293563167|ref|ZP_06677625.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E1162] gi|294623125|ref|ZP_06702011.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium U0317] gi|314939370|ref|ZP_07846611.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133a04] gi|314941573|ref|ZP_07848458.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133C] gi|314949600|ref|ZP_07852924.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0082] gi|314953707|ref|ZP_07856582.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133A] gi|314992163|ref|ZP_07857607.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133B] gi|314997654|ref|ZP_07862584.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133a01] gi|68195489|gb|EAN09933.1| Binding-protein-dependent transport systems inner membrane component:Substrate-binding region of ABC-type glycine betaine transport system [Enterococcus faecium DO] gi|281335146|gb|ADA62230.1| Glycine betaine ABC transport system, permease protein OpuAB / Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC [Enterococcus faecium] gi|291597494|gb|EFF28659.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium U0317] gi|291604858|gb|EFF34334.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E1162] gi|313588289|gb|EFR67134.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133a01] gi|313593266|gb|EFR72111.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133B] gi|313594291|gb|EFR73136.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133A] gi|313599632|gb|EFR78475.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133C] gi|313641355|gb|EFS05935.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0133a04] gi|313644024|gb|EFS08604.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Enterococcus faecium TX0082] Length = 575 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F+L++ + + + ++ + I L T +L + VIS++ Sbjct: 55 LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P++L E S SF + QK + L +P + ++ + + Sbjct: 170 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + + ++ + + D+ Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 272 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|33867016|ref|NP_898575.1| putative cyanate ABC transporter [Synechococcus sp. WH 8102] gi|33639617|emb|CAE09001.1| putative cyanate ABC transporter [Synechococcus sp. WH 8102] Length = 259 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 11/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + L + + I++ RV++ +A ++ IPVG+++G + S + P+ QLL + Sbjct: 60 PNDLGIGFNLLISLRRVLIGYTLAMVVAIPVGLFVGVSKTVKSSVDPYVQLLKPVSPLAW 119 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + N + ++ + W L N G + +D +VA S + Sbjct: 120 LPIGLFVFR----NSEVTGIFVIFITSIWPTLINTAIGVQSVDSDVLKVAKSLGASKTNT 175 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 +ILP + P + G + G AW + +E+ TG+G +I Sbjct: 176 ITKVILPAVMPNILAGMRISMGTAWLVIVAAEMLLG-------TGIGYFIWNEWNNLYVA 228 Query: 554 EVVLGVLIMCCFVLALNRFL 573 + + ++I+ L++ Sbjct: 229 NIFVAIIIIGITGYVLDQIF 248 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 82/195 (42%), Gaps = 15/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+L ++++ S+ + + P + +++ + L +L + F Sbjct: 69 LLISLRRVLIGYTLAMVVAIPVGLFVGVSKTVKSSVDPYVQLLKPVSPLAWLPIGLFVFR 128 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 N +E+ IF IF + +W + + ++ D+ +V++S S + Sbjct: 129 N--------SEVTGIFVIFITSIWPTLINTAIGVQSVDSDVLKVAKSLGASKTNTITKVI 180 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P MP ++ M +SM W +VA+EM++ GIG +I + I A Sbjct: 181 LPAVMPNILAGMRISMGTAWLVIVAAEMLLG-------TGIGYFIWNEWNNLYVANIFVA 233 Query: 245 MLTMLGVIFLYDQLL 259 ++ + ++ DQ+ Sbjct: 234 IIIIGITGYVLDQIF 248 >gi|257880362|ref|ZP_05660015.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,230,933] gi|257882213|ref|ZP_05661866.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,502] gi|257891020|ref|ZP_05670673.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,410] gi|257894273|ref|ZP_05673926.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,408] gi|260562336|ref|ZP_05832850.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium C68] gi|257814590|gb|EEV43348.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,230,933] gi|257817871|gb|EEV45199.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,502] gi|257827380|gb|EEV54006.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,410] gi|257830652|gb|EEV57259.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,231,408] gi|260073260|gb|EEW61601.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium C68] Length = 571 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F+L++ + + + ++ + I L T +L + VIS++ Sbjct: 51 LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 108 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 109 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 165 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P++L E S SF + QK + L +P + ++ + + Sbjct: 166 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 220 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + + ++ + + D+ Sbjct: 221 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 268 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 77 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 129 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 130 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 185 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 186 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 238 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 239 VLSALQRAQVGNGFVNGVALVILAIIIDRF 268 >gi|76788447|ref|YP_330414.1| glycine betaine/proline ABC transporter permease/substrate-binding protein [Streptococcus agalactiae A909] gi|77406685|ref|ZP_00783726.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77412028|ref|ZP_00788356.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|76563504|gb|ABA46088.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptococcus agalactiae A909] gi|77161934|gb|EAO72917.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77174704|gb|EAO77532.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 575 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 99/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + L + T +L A +IS++ Sbjct: 54 LLFIVLITAAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS ++ V+ PILD MQ++P +L V +F G V G + +FA+ Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ IP +L E S SF + QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L+++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L I WQ + + + T V+V +I+ I Sbjct: 51 INPLLFIVLITAAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + SF T + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271 >gi|227552551|ref|ZP_03982600.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecium TX1330] gi|257896894|ref|ZP_05676547.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium Com12] gi|293378476|ref|ZP_06624639.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecium PC4.1] gi|227178300|gb|EEI59272.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus faecium TX1330] gi|257833459|gb|EEV59880.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium Com12] gi|292642805|gb|EFF60952.1| ABC transporter, substrate-binding protein, QAT family [Enterococcus faecium PC4.1] Length = 574 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 16/242 (6%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76 N+ ++ L I ++ I I + + ++ + L T +L + Sbjct: 46 NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 VIS++ L AKS + ++ PILD MQ++P +L V +F G V G Sbjct: 106 VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + IFA+ + + + +P++L E S SF + QK + L +P + ++ + Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + VV + MI PG+G + A++ + + ++ + + D Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270 Query: 257 QL 258 + Sbjct: 271 RF 272 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|293553996|ref|ZP_06674598.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1039] gi|291601853|gb|EFF32103.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1039] Length = 574 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 16/242 (6%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76 N+ ++ L I ++ I I + + ++ + L T +L + Sbjct: 46 NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 VIS++ L AKS + ++ PILD MQ++P +L V +F G V G Sbjct: 106 VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + IFA+ + + + +P++L E S SF + QK + L +P + ++ + Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + VV + MI PG+G + A++ + + ++ + + D Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270 Query: 257 QL 258 + Sbjct: 271 RF 272 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|24379499|ref|NP_721454.1| putative ABC transporter, proline/glycine betaine permease protein [Streptococcus mutans UA159] gi|290580500|ref|YP_003484892.1| putative proline/glycine betaine ABC transporter permease [Streptococcus mutans NN2025] gi|24377438|gb|AAN58760.1|AE014944_10 putative ABC transporter, proline/glycine betaine permease protein [Streptococcus mutans UA159] gi|254997399|dbj|BAH88000.1| putative ABC transporter, proline/glycine betaine permease protein [Streptococcus mutans NN2025] Length = 576 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 98/235 (41%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 ++V+ + ++ T+P + + + SL T +L + IS++ Sbjct: 54 LLLIVLVTLAAFFLARKKWTLPTFTLLGLLFIYN-QSLWDDLVNTFTLVLVSSFISIVIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNNTVKQIINPILDFMQTMPAFVYLIPAVAFFG---IGIVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ IP +L E + +F + QK + + +P + ++ + ++ Sbjct: 170 PTVRF-----TNLAIREIPTELIEAADAFGSTSRQKLFKVELPLAKNTIMAGINQTIMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L ++ + + D+ Sbjct: 225 LSMVVTGSMI-------GAPGLGRGVLSALQHADIGSGFVNGLALVILAIVIDRF 272 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 70/233 (30%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 V+ +L I + W + + + + T V+V I+ + Sbjct: 51 VNPLLLIVLVTLAAFFLARKKWTLPTFTLLGLLFIYNQSLWDDLVNTFTLVLVSSFISIV 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + I P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNNTVKQIINPILDFMQTMPAFVYLIPAVAFFGIGIVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E A +F T + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIREIPTELIEAADAFGSTSRQKLFKVELPLAKNTIMAGINQTIMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + ++RF Sbjct: 227 MVVTGSMIG-------APGLGRGVLSALQHADIGSGFVNGLALVILAIVIDRF 272 >gi|21909680|ref|NP_663948.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS315] gi|21903863|gb|AAM78751.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS315] Length = 561 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 40 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 98 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 99 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 155 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 156 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 210 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 211 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 258 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 37 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 96 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 97 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 152 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 153 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 212 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 213 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 258 >gi|257888218|ref|ZP_05667871.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,141,733] gi|257824272|gb|EEV51204.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium 1,141,733] Length = 575 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 16/242 (6%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76 N+ ++ L I ++ I I + + ++ + L T +L + Sbjct: 46 NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 VIS++ L AKS + ++ PILD MQ++P +L V +F G V G Sbjct: 106 VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + IFA+ + + + +P++L E S SF + QK + L +P + ++ + Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + VV + MI PG+G + A++ + + ++ + + D Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270 Query: 257 QL 258 + Sbjct: 271 RF 272 Score = 81.9 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|289567008|ref|ZP_06447409.1| ABC transporter, glycine-betaine/proline permease [Enterococcus faecium D344SRF] gi|294615264|ref|ZP_06695141.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1636] gi|294617327|ref|ZP_06696966.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1679] gi|289161209|gb|EFD09108.1| ABC transporter, glycine-betaine/proline permease [Enterococcus faecium D344SRF] gi|291591861|gb|EFF23493.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1636] gi|291596400|gb|EFF27654.1| glycine betaine/L-proline ABC transporter, substrate-binding/permease protein [Enterococcus faecium E1679] Length = 575 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F+L++ + + + ++ + I L T +L + VIS++ Sbjct: 55 LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P++L E S SF + QK + L +P + ++ + + Sbjct: 170 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + + ++ + + D+ Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 272 Score = 81.9 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|261209289|ref|ZP_05923681.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium TC 6] gi|260076835|gb|EEW64570.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium TC 6] Length = 571 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F+L++ + + + ++ + I L T +L + VIS++ Sbjct: 51 LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 108 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 109 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 165 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P++L E S SF + QK + L +P + ++ + + Sbjct: 166 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 220 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + + ++ + + D+ Sbjct: 221 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 268 Score = 81.9 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 77 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 129 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 130 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 185 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 186 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 238 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 239 VLSALQRAQVGNGFVNGVALVILAIIIDRF 268 >gi|293570838|ref|ZP_06681885.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E980] gi|291609106|gb|EFF38381.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E980] Length = 575 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 16/242 (6%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76 N+ ++ L I ++ I I + + ++ + L T +L + Sbjct: 46 NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 VIS++ L AKS + ++ PILD MQ++P +L V +F G V G Sbjct: 106 VISIIIGVPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + IFA+ + + + +P++L E S SF + QK + L +P + ++ + Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + VV + MI PG+G + A++ + + ++ + + D Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270 Query: 257 QL 258 + Sbjct: 271 RF 272 Score = 81.9 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|293568393|ref|ZP_06679714.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E1071] gi|291588914|gb|EFF20741.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium E1071] Length = 575 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F+L++ + + + ++ + I L T +L + VIS++ Sbjct: 55 LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P++L E S SF + QK + L +P + ++ + + Sbjct: 170 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + + ++ + + D+ Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 272 Score = 81.9 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|15674389|ref|NP_268563.1| putative glycine-betaine binding permease [Streptococcus pyogenes M1 GAS] gi|13621479|gb|AAK33284.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes M1 GAS] Length = 575 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|28895060|ref|NP_801410.1| glycine-betaine binding permease protein [Streptococcus pyogenes SSI-1] gi|28810305|dbj|BAC63243.1| putative glycine-betaine binding permease protein [Streptococcus pyogenes SSI-1] Length = 575 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|193077347|gb|ABO12148.2| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii ATCC 17978] Length = 284 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 103/259 (39%), Gaps = 20/259 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 F ++ + +++ FW + G+A I N T DV++ +W Sbjct: 20 FQQLRSYPPRLKSYVIAFTSIAFWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWAFF 79 Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + Sbjct: 80 QLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + + G + IL N + G A A S + Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +I+PG P +TG G W + +E+ S G+G + ES ++ Sbjct: 196 YEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249 Query: 555 VVLGVLIMCCFVLALNRFL 573 +V+G++++ + + + Sbjct: 250 IVVGMVLIGALGMFSSTLV 268 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 99/241 (41%), Gaps = 14/241 (5%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 + ++ L IN+ + P D++ + + + ++ + R++ V+ Sbjct: 42 FWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVL 101 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L LA + ++L L+P L++++ IP + ++ ++ F +E + Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF F ++ + + + + L ++S S + + +P ++P ++ + + Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSI 213 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M WF +V +EMI GIG + + Q+ I+ M+ + + L Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267 Query: 259 L 259 + Sbjct: 268 V 268 >gi|209558734|ref|YP_002285206.1| L-proline Glycine Betaine ABC transport system permease protein proW [Streptococcus pyogenes NZ131] gi|209539935|gb|ACI60511.1| L-proline Glycine Betaine ABC transport system permease protein proW [Streptococcus pyogenes NZ131] Length = 575 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|296111716|ref|YP_003622098.1| betaine ABC transporter permease and substrate binding protein [Leuconostoc kimchii IMSNU 11154] gi|295833248|gb|ADG41129.1| betaine ABC transporter permease and substrate binding protein [Leuconostoc kimchii IMSNU 11154] Length = 568 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 30/262 (11%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMV 77 L A + + II + L + T I L + +L T ++ A V Sbjct: 45 GLTAVPMPLMIIGLTLIAVLTTRKKYGFPIFTFIGLALIANQNLWSDLMSTVTLVIMASV 104 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ISL+ L AKS + ++ PILD MQ++P +L V +F G V G + Sbjct: 105 ISLVIGIPLGILTAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFAS 161 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 IFA + M + +P L E + SF + WQK L +P + ++ Sbjct: 162 IIFA-----LPPMVRMTDLGIRQVPIALVEAADSFGSTTWQKLIKLELPNARNTILAGAN 216 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++ VV + MI PG+G + A++ D+ + L ++ + + D+ Sbjct: 217 QTIMLALSMVVTASMI-------GAPGLGRGVLSAVQRADVGSGFVNGLGLVILAIIIDR 269 Query: 258 L------------LFRPMIVWS 267 + +P W+ Sbjct: 270 FTQKLNTTPGQKSISKPWRRWA 291 Score = 87.3 bits (215), Expect = 7e-15, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + I N + D++ T+ V++ +I+ +I IP+GI P ++ ++P Sbjct: 79 GLALIANQNLWSDLMS-------TVTLVIMASVISLVIGIPLGILTAKSPKTAAIVKPIL 131 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + ++ G P E Sbjct: 132 DFMQTMPGFVYLIPAVAFFGIGVVPGVFASIIF----ALPPMVRMTDLGIRQVPIALVEA 187 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A SF T W+ + LP + GA A + + + + GLG Sbjct: 188 ADSFGSTTWQKLIKLELPNARNTILAGANQTIMLALSMVVTASMIG-------APGLGRG 240 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + L + + ++RF Sbjct: 241 VLSAVQRADVGSGFVNGLGLVILAIIIDRF 270 >gi|56807484|ref|ZP_00365427.1| COG2113: ABC-type proline/glycine betaine transport systems, periplasmic components [Streptococcus pyogenes M49 591] Length = 452 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T +L A +IS+L AK+ + ++ PILD MQ++P +L Sbjct: 9 QGLWKQLMNTFTLVLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIP 68 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ +IP +L E S +F +G Q Sbjct: 69 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRDIPTELIEASDAFGSTGKQ 120 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + +M VV MI PG+G + A++ D+ Sbjct: 121 KLFKVELPLAKNTIMAGVNQTMMLALSMVVTGSMI-------GAPGLGREVLSALQHADI 173 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + + L ++ + + D++ Sbjct: 174 GSGFVSGLALVILAIVLDRM 193 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 11/187 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T V+V +I+ +I IP+GIW+ + + P + PA V+ V+ Sbjct: 18 TFTLVLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGM 77 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + P + E + +F TG + + LP Sbjct: 78 VPGVFASVIF----ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNT 133 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G A + + + GLG + + + + L + Sbjct: 134 IMAGVNQTMMLALSMVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVIL 186 Query: 566 VLALNRF 572 + L+R Sbjct: 187 AIVLDRM 193 >gi|52142494|ref|YP_084335.1| sulfonate/taurine ABC transporter permease [Bacillus cereus E33L] gi|51975963|gb|AAU17513.1| ABC transporter, permease protein; possible sulfonate/taurine transporter [Bacillus cereus E33L] Length = 274 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 10/210 (4%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 I + + ++ RV+ I+ + + IPVG+ IG P + + P Sbjct: 59 IAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFDPVIN 118 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 + P F L + + L+ + T + + N I G A D A Sbjct: 119 FIRFIPPLAFITLFMLWFGIGEQSK----IFLITYATFFIVTINTITGVQAVEEDKIRSA 174 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 S + W+ ++I+P PY TGA A G ++ A + +E+ + G+G I Sbjct: 175 RSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVA------ANEGIGYMI 228 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + +G++I+ ++R Sbjct: 229 WNARLYFKTDWIFVGLVILGLMGFLMDRIF 258 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 88/218 (40%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ SL Y + LR+++ ++ L + L + Sbjct: 55 LPSPIAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFD 114 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ ++ IP L F+T +++F E + IF I + + +T + + + Sbjct: 115 PVINFIRFIPPLAFITLFMLWFGIG--------EQSKIFLITYATFFIVTINTITGVQAV 166 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 D +RS S WQ +++ +P ++P + ++M + +V +EM+ + Sbjct: 167 EEDKIRSARSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIVGAEMVAANE---- 222 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG I A I ++ + + FL D++ Sbjct: 223 --GIGYMIWNARLYFKTDWIFVGLVILGLMGFLMDRIF 258 >gi|262041819|ref|ZP_06015004.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040811|gb|EEW41897.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 294 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV V +A++ IP+G IG + P LL + Sbjct: 93 PNDMGIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRLVSPLAW 152 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + W ++ N G P D+ VA ++ W Sbjct: 153 LPIGLLLFQKAEPASSWT----IFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R I+ P + P +TG + G AW + +E+ + G G+G +I + Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGGL------GIGFWIWNEWNNLNV 261 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 14/179 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ ++ L L +S + P++ +++ + L +L Sbjct: 97 GIGWNVLASLQRVAVGFGLAALAGIPLGFLIGRSLFFARMFNPLIALLRLVSPLAWLPIG 156 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P A+ + IF +W M + + + IP+D V+R +LS W Sbjct: 157 LLLFQKAEP--------ASSWTIFICSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTV 208 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + P +P ++ + +S+ W +VA+EM+ G GIG +I ++ Sbjct: 209 MRKILFPAVLPAVLTGVRLSIGIAWLVIVAAEMLTGG------LGIGFWIWNEWNNLNV 261 >gi|42782116|ref|NP_979363.1| taurine ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42738040|gb|AAS41971.1| taurine ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 274 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 10/210 (4%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 I + + ++ RV+ I+ + + IPVG+ IG P + + P Sbjct: 59 IAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFDPVIN 118 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 + P F L + + L+ + T + + N I G A D A Sbjct: 119 FIRFIPPLAFITLFMLWFGIGEQSK----IFLITYATFFIVTINTITGVQAVEEDKIRSA 174 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 S + W+ ++I+P PY TGA A G ++ A + +E+ + G+G I Sbjct: 175 RSMGASEWQIMFHVIIPAALPYMYTGAKLAMGSSFMAIVGAEMVA------ANEGIGYMI 228 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + +G++I+ ++R Sbjct: 229 WNARLYFKTDWIFVGLVILGLMGFLMDRIF 258 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 88/218 (40%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ SL Y + LR+++ ++ L + L + Sbjct: 55 LPSPIAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNFVAIPVGLLIGRIPWLRALFD 114 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+++ ++ IP L F+T +++F E + IF I + + +T + + + Sbjct: 115 PVINFIRFIPPLAFITLFMLWFGIG--------EQSKIFLITYATFFIVTINTITGVQAV 166 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 D +RS S WQ +++ +P ++P + ++M + +V +EM+ + Sbjct: 167 EEDKIRSARSMGASEWQIMFHVIIPAALPYMYTGAKLAMGSSFMAIVGAEMVAANE---- 222 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG I A I ++ + + FL D++ Sbjct: 223 --GIGYMIWNARLYFKTDWIFVGLVILGLMGFLMDRIF 258 >gi|110678330|ref|YP_681337.1| taurine ABC transporter, permease protein [Roseobacter denitrificans OCh 114] gi|109454446|gb|ABG30651.1| taurine ABC transporter, permease protein [Roseobacter denitrificans OCh 114] Length = 422 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 15/202 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRVVV ++ +++ IP+G +G P + + P PLV+ Sbjct: 229 GYSLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 288 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+ W + +G S A S + W+ RY+I+P Sbjct: 289 GESGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQIMRYVIVPNSL 344 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TGA A G W + +E+ + G G I +++ + V++G++++ Sbjct: 345 PEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTDIVIMGIILIG 398 Query: 564 CFVLALNRFLWHPLYLYGTRCL 585 ++ + + R L Sbjct: 399 VIGFGIDMLM-----RWAERIL 415 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 17/213 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L ++ + R++ ++ L S PI++ M+ +P L + Sbjct: 223 TLVEHLGYSLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLV 282 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ GK I +F + +W M + + + + S S WQ Sbjct: 283 IIWAGIGESGK--------IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQI 334 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 Y+ VP S+P + ++M W VVA+E++ G G I A K Q+ Sbjct: 335 MRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTD 388 Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 ++ ++ + + F D L+ R ++ W K Sbjct: 389 IVIMGIILIGVIGFGIDMLMRWAERILVPWKGK 421 >gi|332853874|ref|ZP_08435033.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332865984|ref|ZP_08436752.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] gi|332728355|gb|EGJ59734.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332734914|gb|EGJ66001.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] Length = 284 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 F ++ + +++ FW + G+A N T DV++ +W Sbjct: 20 FQQLRSYPARLKSYAIAFTSIAFWIVIWQGLAQFKTNLGFVNFSNVPTPLDVIHALWAFF 79 Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++FRVV+ ++A++I + +G+ G +++ + P ++L PA + Sbjct: 80 QLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + + G + IL N + G A A S + Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +I+PG P +TG G W + +E+ S G+G + ES ++ Sbjct: 196 YEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249 Query: 555 VVLGVLIMCCFVLALNRFL 573 +V+G++++ + + + Sbjct: 250 IVVGMVLIGALGMFSSTLV 268 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 + ++ L N+ P D++ + + + ++ + R++ V+ Sbjct: 42 FWIVIWQGLAQFKTNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVL 101 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L LA + ++L L+P L++++ IP + ++ ++ F +E + Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF F ++ + + + + L ++S S + + +P ++P ++ + + Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSI 213 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M WF +V +EMI GIG + + Q+ I+ M+ + + L Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267 Query: 259 L 259 + Sbjct: 268 V 268 >gi|326692454|ref|ZP_08229459.1| ABC-type proline/glycine betaine transport system, permease component [Leuconostoc argentinum KCTC 3773] Length = 568 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 18/241 (7%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMV 77 L A + + I I L I T L + +L + T ++ A V Sbjct: 45 GLTAIPMPLMIAGITLIAILTTPKKIGFPAFTFFGLAIVANQNLWEDLMSTLTLVIMASV 104 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ISL+ L AKS + ++ PILD MQ++P +L V +F G V G + Sbjct: 105 ISLVIGIPLGILTAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFAS 161 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 IFA + M + +P L E + SF + WQK L +P + ++ Sbjct: 162 IIFA-----LPPMVRMTDLGIRQVPVSLVEAADSFGSTTWQKLIKLELPSARNTILAGAN 216 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++ VV + MI PG+G + A++ D+ L ++ + + D+ Sbjct: 217 QTIMLALSMVVTASMI-------GAPGLGRGVLSAVQHADIGLGFVNGLGLVILAIIIDR 269 Query: 258 L 258 Sbjct: 270 F 270 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 18/215 (8%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + + + N ++D++ T+ V++ +I+ +I IP+GI P ++ Sbjct: 74 AFTFFGLAIVANQNLWEDLMS-------TLTLVIMASVISLVIGIPLGILTAKSPKTAAI 126 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P + P V+ V+ + + ++ G P Sbjct: 127 VKPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASIIF----ALPPMVRMTDLGIRQVPV 182 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 E A SF T W+ + LP + GA A + + + + Sbjct: 183 SLVEAADSFGSTTWQKLIKLELPSARNTILAGANQTIMLALSMVVTASMIG-------AP 235 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + + + L + + ++RF Sbjct: 236 GLGRGVLSAVQHADIGLGFVNGLGLVILAIIIDRF 270 >gi|184158076|ref|YP_001846415.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acinetobacter baumannii ACICU] gi|332874536|ref|ZP_08442439.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] gi|183209670|gb|ACC57068.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii ACICU] gi|332737380|gb|EGJ68304.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] Length = 284 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 F ++ + +++ FW + G+A N T DV++ +W Sbjct: 20 FQQLRSYPARLKSYVIAFTSIAFWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFF 79 Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + Sbjct: 80 QLSAAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + + G + IL N + G A A S + Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +I+PG P +TG G W + +E+ S G+G + ES ++ Sbjct: 196 HEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249 Query: 555 VVLGVLIMCCFVLALNRFL 573 +V+G++++ + + + Sbjct: 250 IVVGMVLIGALGMFSSTLV 268 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 + ++ L +N+ P D++ + + + ++ + R++ V+ Sbjct: 42 FWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVL 101 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L LA + ++L L+P L++++ IP + ++ ++ F +E + Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF F ++ + + + + L ++S S + +P ++P ++ + + Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 213 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M WF +V +EMI GIG + + Q+ I+ M+ + + L Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267 Query: 259 L 259 + Sbjct: 268 V 268 >gi|312136841|ref|YP_004004178.1| binding-protein-dependent transport systems inner membrane component [Methanothermus fervidus DSM 2088] gi|311224560|gb|ADP77416.1| binding-protein-dependent transport systems inner membrane component [Methanothermus fervidus DSM 2088] Length = 250 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 88/236 (37%), Gaps = 12/236 (5%) Query: 340 VSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 ++ I W + I I +++ +T + T+ RVV+ +IA Sbjct: 10 SPLLVIILWSLLTFTNIIPNYILPNPGEVLISFYTLIKNGELFVHAYNTLMRVVLGFLIA 69 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 S I IP+GI IG+ I + P Q+L P + P + + ++ Sbjct: 70 SAIAIPLGIGIGWSETIENIFNPLIQILRPIPPLAWVPFALIWFGIGLKSE----VFIIF 125 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 G+ + IL N + F E A + ++LPG P V G G Sbjct: 126 IGSFFPILLNTVDAVKGVEKVFIESAYVLGANEQQILTKVVLPGSLPGIVLGMRVGFGIG 185 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + ++ +E+ + +GLG I +S +++G++ + ++ Sbjct: 186 FMCTVAAEMIA------AKSGLGYLIMDSMRLMDTGTMLVGIITIGILGFLIDTIF 235 Score = 126 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 90/220 (40%), Gaps = 14/220 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +++ + L +A T +R++ +I+ S + + Sbjct: 32 LPNPGEVLISFYTLIKNGELFVHAYNTLMRVVLGFLIASAIAIPLGIGIGWSETIENIFN 91 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ I++ IP L ++ F +++F + +F IF + + + ++ + Sbjct: 92 PLIQILRPIPPLAWVPFALIWFGIGLKSE--------VFIIFIGSFFPILLNTVDAVKGV 143 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + E + + Q + +P S+PG+V M + G+ VA+EMI Sbjct: 144 EKVFIESAYVLGANEQQILTKVVLPGSLPGIVLGMRVGFGIGFMCTVAAEMIAAKS---- 199 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G I +++ D +L ++T+ + FL D + + Sbjct: 200 --GLGYLIMDSMRLMDTGTMLVGIITIGILGFLIDTIFAK 237 >gi|25011877|ref|NP_736272.1| hypothetical protein gbs1838 [Streptococcus agalactiae NEM316] gi|77413910|ref|ZP_00790086.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|24413418|emb|CAD47497.1| Unknown [Streptococcus agalactiae NEM316] gi|77160043|gb|EAO71178.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] Length = 575 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + + ++ +P + + L + T +L A +IS++ Sbjct: 54 LLFIVLITVAVFFLAKKKWQLPTFTFIGLLFIYNQG-LWEQLINTFNLVLVASLISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS ++ V+ PILD MQ++P +L V +F G V G + +FA+ Sbjct: 113 VPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVVFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ IP +L E S SF + QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L+++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLSLVILAIVLDRV 272 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L I V WQ + + + T V+V +I+ I Sbjct: 51 INPLLFIVLITVAVFFLAKKKWQLPTFTFIGLLFIYNQGLWEQLINTFNLVLVASLISII 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGVPLGIWMAKSDKVKQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVVF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + SF T + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIREIPLELIEASDSFGSTAKQKLFKVELPLAKNTIMAGINQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLSLVILAIVLDR 271 >gi|254502502|ref|ZP_05114653.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222438573|gb|EEE45252.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 421 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 10/190 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV ++ S+I IP+G +G P + + P PLV+ Sbjct: 230 SLLRVCAGFLLGSLIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + AG S A S + + ++I+P P Sbjct: 290 SGK----IILLFLAALWIMTIAARAGVSGVNISKVHAAYSLGASKSQILWHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGA A G W + +E+ + G G I +++ V++G++++ Sbjct: 346 IFTGARVAMGVCWGTVVAAELVAAEK------GAGKMIVAASKFQLTDIVIMGIILIGVI 399 Query: 566 VLALNRFLWH 575 A++ + Sbjct: 400 GFAIDVLMRR 409 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 84/213 (39%), Gaps = 17/213 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L + + LR+ + ++ L S PI++ M+ +P L + Sbjct: 222 TLLDHLGWSLLRVCAGFLLGSLIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV 281 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W MT + + + + S S Q Sbjct: 282 IIWFGIGESGK--------IILLFLAALWIMTIAARAGVSGVNISKVHAAYSLGASKSQI 333 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 W++ VP S+P + ++M W VVA+E++ G G I A K Q Sbjct: 334 LWHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGKMIVAASKFQLTD 387 Query: 240 AILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269 ++ ++ + + F D L+ R ++ W + Sbjct: 388 IVIMGIILIGVIGFAIDVLMRRAENWLVPWKGR 420 >gi|253689108|ref|YP_003018298.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755686|gb|ACT13762.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 304 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 13/198 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 W + + Y + + W ++ RV + +A+++ IP G IG + Sbjct: 84 WATWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPTGFLIGRFTFL 143 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ + P LL + P+ + + + + W ++ N G Sbjct: 144 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 199 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ + R I+LP + P +TG + G AW + +E+ + G Sbjct: 200 IPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGG---- 255 Query: 535 RTTGLGAYIAESTEKGSF 552 G+G +I + Sbjct: 256 --VGIGFWIWNEWNNLNV 271 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 108/279 (38%), Gaps = 24/279 (8%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPIT 55 F Y L + + +FP + L V V I + + Sbjct: 43 FAYRPLLRKLFQPLFPAVLGLGLLVAVWQIAALNSENFPTPWATWLAALSLFADPFYIAG 102 Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + + + R+ ++ L L + L +L PI+ +++ + L + Sbjct: 103 PNDQGIGWNVLASLQRVGIGFGLAALVGIPTGFLIGRFTFLANMLNPIISLLRPVSPLAW 162 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L ++ F P A+ + IF +W M + + + IP+D V+R +LS Sbjct: 163 LPIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLS 214 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 215 EFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWIWNEWNN 268 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 ++ I+ A++ + + L +Q ++ +N+F + Sbjct: 269 LNVENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 303 >gi|283131336|dbj|BAI63341.1| glycine betaine-binding protein/glycine betaine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis] Length = 540 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + L + T +L A +IS+L Sbjct: 19 LLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQG-LWEQLINTFTLVLVASLISVLIG 77 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + V+ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 78 IPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 134 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 135 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 189 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 190 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 237 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 68/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + T V+V +I+ + Sbjct: 16 IHPLLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQGLWEQLINTFTLVLVASLISVL 75 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 76 IGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 131 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 132 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 191 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 192 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 237 >gi|163732636|ref|ZP_02140081.1| taurine ABC transporter, permease protein [Roseobacter litoralis Och 149] gi|161393996|gb|EDQ18320.1| taurine ABC transporter, permease protein [Roseobacter litoralis Och 149] Length = 422 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 15/202 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRVVV ++ +++ IP+G +G P + + P PLV+ Sbjct: 229 GYSLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 288 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+ W + +G S A S + W+ RY+I+P Sbjct: 289 GESGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQIMRYVIVPNSL 344 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TGA A G W + +E+ + G G I +++ + V++G++++ Sbjct: 345 PEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTDIVIMGIILIG 398 Query: 564 CFVLALNRFLWHPLYLYGTRCL 585 ++ + + R L Sbjct: 399 VIGFGIDMLM-----RWAERIL 415 Score = 126 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 17/213 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L ++ + R++ ++ L S PI++ M+ +P L + Sbjct: 223 TLVEHLGYSLFRVVVGFMLGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLV 282 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ GK I +F + +W M + + + + S S WQ Sbjct: 283 IIWAGIGESGK--------IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKWQI 334 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 Y+ VP S+P + ++M W VVA+E++ G G I A K Q+ Sbjct: 335 MRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMTASKFQNTD 388 Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 ++ ++ + + F D L+ R ++ W K Sbjct: 389 IVIMGIILIGVIGFGIDMLMRWAERILVPWKGK 421 >gi|258614687|ref|ZP_05712457.1| glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [Enterococcus faecium DO] Length = 560 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F+L++ + + + ++ + I L T +L + VIS++ Sbjct: 55 LFILLLTVAAFFISKKRPGLTLFTLIGLWFIY--NQGLWNDLMNTVTLVLLSSVISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 VPLGILMAKSSKAQSIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P++L E S SF + QK + L +P + ++ + + Sbjct: 170 PTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLS 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + + ++ + + D+ Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRF 272 Score = 81.5 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + S I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQSIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|239501805|ref|ZP_04661115.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii AB900] Length = 284 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 20/259 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 F ++ + +++ FW + G+A N T DV++ +W Sbjct: 20 FQQLRSYPARLKSYVIAFTSIAFWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFF 79 Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++FRVV ++A++I + +G+ G +++ + P ++L PA + Sbjct: 80 QLSAAFEHVESSVFRVVFGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + + G + IL N + G A A S + Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +I+PG P +TG G W + +E+ S G+G + ES ++ Sbjct: 196 HEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249 Query: 555 VVLGVLIMCCFVLALNRFL 573 +V+G++++ + + + Sbjct: 250 IVVGMVLIGALGMFSSTLV 268 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 + ++ L +N+ P D++ + + + ++ + R++ V+ Sbjct: 42 FWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVFGFVL 101 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L LA + ++L L+P L++++ IP + ++ ++ F +E + Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF F ++ + + + + L ++S S + +P ++P ++ + + Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 213 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M WF +V +EMI GIG + + Q+ I+ M+ + + L Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267 Query: 259 L 259 + Sbjct: 268 V 268 >gi|313890394|ref|ZP_07824025.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus pseudoporcinus SPIN 20026] gi|313121237|gb|EFR44345.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus pseudoporcinus SPIN 20026] Length = 575 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 15/199 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L ++ T +L A +IS++ AKS + ++ PILD MQ++P +L Sbjct: 88 QGLWEHLINTFTLVLVASLISIIIGIPLGIWMAKSTTVRQIVNPILDFMQTMPAFVYLIP 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V GA + IFA+ + + + NI +L E S +F + Q Sbjct: 148 AVAFFG---IGMVPGAFASVIFALPPTVRF-----TNLGISNISTELVEASDAFGSTPRQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + +P + ++ + +M VV MI PG+G + A++ D+ Sbjct: 200 KLLKVELPLAKNTIMAGINQTMMLALSMVVTGSMI-------GAPGLGREVLSALQHADV 252 Query: 239 LAILYAMLTMLGVIFLYDQ 257 + L ++ + + D+ Sbjct: 253 GTGFVSGLALVILAIILDR 271 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L I W + + + T V+V +I+ I Sbjct: 51 INPLLFIVLVTAAVFFLAKKKWPLATFTFLGLLFIYNQGLWEHLINTFTLVLVASLISII 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKSTTVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGAFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + G S + E + +F T + + LP + G A + Sbjct: 167 ALPPTVRFTNLGISNISTELVEASDAFGSTPRQKLLKVELPLAKNTIMAGINQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADVGTGFVSGLALVILAIILDR 271 >gi|325122146|gb|ADY81669.1| nitrate ABC transporter, permease protein [Acinetobacter calcoaceticus PHEA-2] Length = 284 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 103/248 (41%), Gaps = 20/248 (8%) Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----------I 385 N ++++ +FW + G+A I N T DV++ +W Sbjct: 31 KNYAIAFISIVFWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWTFFQLSTAFEHVES 90 Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + PL + Sbjct: 91 SVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPSSE 150 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + G + IL N + G A F A S + +I+PG P Sbjct: 151 AS----MIFITFIGALFPILLNTVHGVGAVDPRFVASAKSLGASDLAIIHEVIIPGALPN 206 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G W + +E+ S G+G + ES ++ +V+G++++ Sbjct: 207 IITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGAL 260 Query: 566 VLALNRFL 573 + + + Sbjct: 261 GMFSSTLV 268 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 + ++ L IN+ + P D++ + + + ++ + R++ V+ Sbjct: 42 FWIVIWQGLAQFKINLGIVNFSNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVL 101 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L LA + ++L L+P L++++ IP + ++ ++ F +E + Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF F ++ + + + + ++S S + +P ++P ++ + + Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRFVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 213 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M WF +V +EMI GIG + + Q+ I+ M+ + + L Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267 Query: 259 L 259 + Sbjct: 268 V 268 >gi|293395630|ref|ZP_06639913.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291421949|gb|EFE95195.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 299 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 82/238 (34%), Gaps = 17/238 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG----IAWQSIGYIVNHFTY--- 373 + + F ++ ++ W WQ+ + Y Sbjct: 38 PRSSLRWQQAFRRVVPAALGMVLVLAVWQIAALNSQGFPTPLATWQAALTLFADPFYSAG 97 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + W ++ RV +A+++ IP G +G ++ + P LL + Sbjct: 98 PNDQGIGWNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLAQMLNPIISLLRPVSPLAW 157 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + W ++ N G + P D+ VA ++ W Sbjct: 158 LPIGLLLFQRAEPASTWT----IFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTV 213 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 R I+ P + P+ +TG + G AW + +E+ + G G+G +I + Sbjct: 214 MRKILFPAVLPFVLTGVRLSIGIAWLVIVAAEMLTGG------VGIGFWIWNEWNNLN 265 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 88/231 (38%), Gaps = 20/231 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYAS 66 RR+ P ++ + V I + G + + + + Sbjct: 49 RRVVPAALGMVLVLAVWQIAALNSQGFPTPLATWQAALTLFADPFYSAGPNDQGIGWNVL 108 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ + ++ L L + L +L PI+ +++ + L +L ++ F Sbjct: 109 ASLQRVATGFGLAALVGIPAGFLLGRFAFLAQMLNPIISLLRPVSPLAWLPIGLLLFQRA 168 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P A+ + IF +W M + + + IP+D V+R +LS W + P Sbjct: 169 EP--------ASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFP 220 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 +P ++ + +S+ W +VA+EM+ G GIG +I + Sbjct: 221 AVLPFVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNNLN 265 >gi|332522360|ref|ZP_08398612.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Streptococcus porcinus str. Jelinkova 176] gi|332313624|gb|EGJ26609.1| ABC transporter, quaternary amine uptake transporter family, substrate-binding protein [Streptococcus porcinus str. Jelinkova 176] Length = 575 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L ++ T +L A +IS++ AKS + ++ PILD MQ++P +L Sbjct: 88 QGLWEHLINTFTLVLVASLISIIIGIPLGIWMAKSATVRQIVNPILDFMQTMPAFVYLIP 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + NI +L E S +F + Q Sbjct: 148 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLGISNISTELVEASDAFGSTPRQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + +P + ++ + +M VV MI PG+G + A++ D+ Sbjct: 200 KLLKVELPLAKNTIMAGINQTMMLALSMVVTGSMI-------GAPGLGREVLSALQHADI 252 Query: 239 LAILYAMLTMLGVIFLYDQ 257 + L ++ + + D+ Sbjct: 253 GTGFVSGLALVILAIILDR 271 Score = 87.7 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 82/274 (29%), Gaps = 13/274 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + L++ L L I + + + + + V Sbjct: 11 VAKLVEKLTEWLTHTFSGLFNFLQTIGSYVMDWITSVLLFINPLLFIVLVTAAVFFLAKK 70 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + ++ F Y L+ + T+ V+V +I+ II IP+GIW+ + Sbjct: 71 KWPLATFTFLGLLFIYNQGLWEHLINTFTL--VLVASLISIIIGIPLGIWMAKSATVRQI 128 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P + PA V+ V+ + + + G S Sbjct: 129 VNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGISNIST 184 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E + +F T + + LP + G A + + + Sbjct: 185 ELVEASDAFGSTPRQKLLKVELPLAKNTIMAGINQTMMLALSMVVTGSMIG-------AP 237 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + + + + L + + L+R Sbjct: 238 GLGREVLSALQHADIGTGFVSGLALVILAIILDR 271 >gi|227326127|ref|ZP_03830151.1| nitrate transporter permease component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 305 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 88/258 (34%), Gaps = 13/258 (5%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 I +P ++R F + F + + + I Sbjct: 25 ITPLPTKPATPAKVPAAPAFAYRPLLRKLFQQLFPAVLGLGLLVAVWQIAALNSENFPTP 84 Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 W + + Y + + W ++ RV + +A+++ IP G IG + Sbjct: 85 WTTWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFL 144 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ + P LL + P+ + + + + W ++ N G Sbjct: 145 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 200 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ + R I+LP + P +TG + G AW + +E+ + G Sbjct: 201 IPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGG---- 256 Query: 535 RTTGLGAYIAESTEKGSF 552 G+G +I + Sbjct: 257 --VGIGFWIWNEWNNLNV 272 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 109/279 (39%), Gaps = 24/279 (8%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPIT 55 F Y L + +++FP + L V V I + + Sbjct: 44 FAYRPLLRKLFQQLFPAVLGLGLLVAVWQIAALNSENFPTPWTTWLAALSLFADPFYIAG 103 Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + + + R+ ++ L L + L +L PI+ +++ + L + Sbjct: 104 PNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAW 163 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L ++ F P A+ + IF +W M + + + IP+D V+R +LS Sbjct: 164 LPIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLS 215 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 216 EFTIMRKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWIWNEWNN 269 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 ++ I+ A++ + + L +Q ++ +N+F + Sbjct: 270 LNVENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 304 >gi|323128141|gb|ADX25438.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 575 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQG-LWEQLINTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + V+ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 68/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQGLWEQLINTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|251783394|ref|YP_002997699.1| glycine betaine-binding protein/glycinebetaine transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392026|dbj|BAH82485.1| glycine betaine-binding protein/glycinebetaine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 575 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQG-LWEQLINTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + V+ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 68/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAAMFFLAKKKWPLPTFTFLGLLFIYNQGLWEQLINTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQVVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|154247972|ref|YP_001418930.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154162057|gb|ABS69273.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 273 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 92/227 (40%), Gaps = 18/227 (7%) Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWL--------GCITMFRVVVLIIIASIIWIPVGI 406 A+ + W + + + Y+ WL ++ RV + + + + +P+G+ Sbjct: 41 AAVAVRWWAYLAPMEAYDPAAGSYLAWLFSGEMIHDAIGSLTRVALGFFVGAGLALPLGL 100 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 ++G I I P Q+L P + PL + N L+ G + +L Sbjct: 101 FMGSSDTIYRHINPLMQVLRPIPPIAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLM 156 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N IAG + A S + +R +ILP PY ++GA G A+ IV+E+ Sbjct: 157 NTIAGVRHVDGIYIRAARSLGASRLTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEM 216 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + GLG I E+ E +++ G+ + LA++ + Sbjct: 217 IA------VNNGLGFRILEAREYFWSDKIIAGMFTIGLLGLAIDMAV 257 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 82/240 (34%), Gaps = 18/240 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81 +V+ + P + D + L + A + R+ + Sbjct: 34 PMVLPSPAAVAVRWWAYLAPMEAYDPAAGSYLAWLFSGEMIHDAIGSLTRVALGFFVGAG 93 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + + P++ +++ IP + ++ ++++F A+F Sbjct: 94 LALPLGLFMGSSDTIYRHINPLMQVLRPIPPIAYIPLSILWFGLG--------NAPAVFL 145 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + ++ +RS S F + +P + P ++ + + Sbjct: 146 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRLTIFRRVILPAATPYILSGARIGIG 205 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + V+ +EMI V + G+G I A + I+ M T+ + D + R Sbjct: 206 TAFIVVIVAEMIAVNN------GLGFRILEAREYFWSDKIIAGMFTIGLLGLAIDMAVSR 259 >gi|299770270|ref|YP_003732296.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter sp. DR1] gi|298700358|gb|ADI90923.1| Putative ABC transporter permease protein MJ0413 [Acinetobacter sp. DR1] Length = 284 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 20/259 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 F ++ + +++ +FW V G+A I N T DV++ +W Sbjct: 20 FQQLRSYPAHLKSYVIAFTSIVFWIAVWQGLAQFKINLGIVNFSNVPTPLDVIHALWAFF 79 Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++FRVVV ++A++I + +G+ G +++ + P ++L PA + Sbjct: 80 QLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + + G + IL N + G A A S + Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +I+PG P TG G W + +E+ S G+G + ES ++ Sbjct: 196 YEVIIPGALPNITTGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249 Query: 555 VVLGVLIMCCFVLALNRFL 573 +V+G++++ + + + Sbjct: 250 IVVGMVLIGALGMFSSTLV 268 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 94/228 (41%), Gaps = 14/228 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 IN+ + P D++ + + + ++ + R++ V++ L LA Sbjct: 55 INLGIVNFSNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAG 114 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + ++L L+P L++++ IP + ++ ++ F +E + IF F ++ + Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASMIFITFIGALFPIL 166 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S S + + +P ++P + + + M WF +V +E Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNITTGLSIGMGTCWFCLVTAE 226 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 MI GIG + + Q+ I+ M+ + + L+ Sbjct: 227 MISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTLV 268 >gi|188580473|ref|YP_001923918.1| ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179343971|gb|ACB79383.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium populi BJ001] Length = 273 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 18/224 (8%) Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWL--------GCITMFRVVVLIIIASIIWIPVGI 406 A+ W + + + + +WL +++RVVV ++ + + +P+G+ Sbjct: 41 AAVAARWWAYLAPLEAYDPAQGSWFLWLFSGEMLHDALASLYRVVVGFLVGAGLALPLGL 100 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 ++G I I P Q+L P + PL + N L+ G + +L Sbjct: 101 FMGTSDVIYRHINPLMQVLRPIPPIAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLM 156 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N IAG + A S + +R +ILP PY ++GA G A+ IV+E+ Sbjct: 157 NTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEM 216 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + GLG I E+ E +++ G+L + L ++ Sbjct: 217 IA------VNNGLGFRILEAREYFWSDKIIAGMLTIGALGLIID 254 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 86/240 (35%), Gaps = 18/240 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81 +V+ + P + D + L + A + R++ ++ Sbjct: 34 PMVLPSPAAVAARWWAYLAPLEAYDPAQGSWFLWLFSGEMLHDALASLYRVVVGFLVGAG 93 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + + P++ +++ IP + ++ ++++F A+F Sbjct: 94 LALPLGLFMGTSDVIYRHINPLMQVLRPIPPIAYIPLSILWFGLGN--------APAVFL 145 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + ++ +RS S F + +P + P ++ + + Sbjct: 146 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIG 205 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + V+ +EMI V + G+G I A + I+ MLT+ + + D + R Sbjct: 206 TAFIVVIVAEMIAVNN------GLGFRILEAREYFWSDKIIAGMLTIGALGLIIDMGVSR 259 >gi|310640756|ref|YP_003945514.1| glycine betaine abc transporter permease protein [Paenibacillus polymyxa SC2] gi|309245706|gb|ADO55273.1| Glycine betaine ABC transporter permease protein [Paenibacillus polymyxa SC2] Length = 864 Score = 141 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 22/243 (9%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L F+++IGII ++ +Q T ++ + I D T ++++ ++S++ Sbjct: 50 LVFIVIIGIIAFMIGRVQLTL--FTVIGFLLI--DNLGYWSETMNTLGLVITSALVSIVI 105 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 A S+ ++ P+LD MQ++P +L V +F G V G + IFAI Sbjct: 106 GIPIGIWCAYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSL---GVVPGVIASVIFAI 162 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +L E S +F + QK + + +P ++P L+ + ++ Sbjct: 163 P-----PTIRMTNLGIMQVSDELVEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIML 217 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259 VV + MI GIG+ + A+ + + A L ++ + + D+ L Sbjct: 218 SLSMVVIASMI-------GAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNL 270 Query: 260 FRP 262 F+P Sbjct: 271 FKP 273 Score = 95.8 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 83/226 (36%), Gaps = 13/226 (5%) Query: 349 FCVVCGVAIGIA--WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 F V+ G+ + Q + V F D L T+ V+ +++ +I IP+GI Sbjct: 52 FIVIIGIIAFMIGRVQLTLFTVIGFLLIDNLGYWSETMNTLGLVITSALVSIVIGIPIGI 111 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 W + S I P + PA V+ + V+++ L + +IF + Sbjct: 112 WCAYSKSASRIITPLLDFMQTMPAFVYL---LPAVTFFSLGVVPGVIASVIF-AIPPTIR 167 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 G ++ E + +F T + + LP P + G + + +++ + Sbjct: 168 MTNLGIMQVSDELVEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLSMVVIASM 227 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 G+GA + + + + L + + L+RF Sbjct: 228 IG-------AEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRF 266 >gi|260555053|ref|ZP_05827274.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] gi|260411595|gb|EEX04892.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] Length = 284 Score = 141 bits (357), Expect = 3e-31, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 F ++ + +++ FW + G+A N T DV++ +W Sbjct: 20 FQQLRSYPARLKSYVIAFTSIAFWIVIWQGLAQFKVNLGFVNFGNVPTPLDVIHALWAFF 79 Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++FRVV+ ++A++I + +G+ G +++ + P ++L PA + Sbjct: 80 QLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + + G + IL N + G A A S + Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +I+PG P +TG G W + +E+ S G+G + ES ++ Sbjct: 196 HEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249 Query: 555 VVLGVLIMCCFVLALNRFL 573 +V+G++++ + + + Sbjct: 250 IVVGMVLIGALGMFSSTLV 268 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 + ++ L +N+ P D++ + + + ++ + R++ V+ Sbjct: 42 FWIVIWQGLAQFKVNLGFVNFGNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVL 101 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L LA + ++L L+P L++++ IP + ++ ++ F +E + Sbjct: 102 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 153 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF F ++ + + + + L ++S S + +P ++P ++ + + Sbjct: 154 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 213 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M WF +V +EMI GIG + + Q+ I+ M+ + + L Sbjct: 214 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 267 Query: 259 L 259 + Sbjct: 268 V 268 >gi|77459382|ref|YP_348889.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77383385|gb|ABA74898.1| putative transport system permease [Pseudomonas fluorescens Pf0-1] Length = 274 Score = 141 bits (357), Expect = 3e-31, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 82/224 (36%), Gaps = 10/224 (4%) Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + V + I D +I ++ RV + A +I I +G+ IG Sbjct: 46 LGLVTFANVPTPLAVIEAALGLGDSGKLIQHLSASLGRVFAGYLAALVIGIALGLAIGRS 105 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + P ++L PA + PL + L+ + + G + IL N + G Sbjct: 106 KWAEDLLLPPLEVLRPIPAVAWIPLAILMFPSSELS----MVFITFTGALFPILLNTVHG 161 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 A S +ILPG P +TG G +W + +E+ S Sbjct: 162 VEGVDPRLIASAKSLGAGRRAILLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISG-- 219 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 G+G Y ES ++ ++V+G+L++ + + + Sbjct: 220 ----QFGIGYYTWESYTIQNYADIVVGMLLIGVLGMGSSLLIKR 259 Score = 130 bits (327), Expect = 8e-28, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 99/262 (37%), Gaps = 24/262 (9%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQET----------TVPRDIVDIVPITLDVH 59 F S +I + A + ++ L P +++ D Sbjct: 12 FRSMKIPKARWTTRATSIAFCLLFWQLAASHHWNLGLVTFANVPTPLAVIEAALGLGDSG 71 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L Q+ S + R+ + + +L+ +S+ +L+P L++++ IP + ++ Sbjct: 72 KLIQHLSASLGRVFAGYLAALVIGIALGLAIGRSKWAEDLLLPPLEVLRPIPAVAWIPLA 131 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F +EL+ +F FT ++ + + + + L ++S Sbjct: 132 ILMF--------PSSELSMVFITFTGALFPILLNTVHGVEGVDPRLIASAKSLGAGRRAI 183 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P + P ++ + + M WF +V +EMI GIG Y + Q+ Sbjct: 184 LLEVILPGAAPSIITGLAIGMGTSWFCLVTAEMISG------QFGIGYYTWESYTIQNYA 237 Query: 240 AILYAMLTMLGVIFLYDQLLFR 261 I+ ML + + L+ R Sbjct: 238 DIVVGMLLIGVLGMGSSLLIKR 259 >gi|257899649|ref|ZP_05679302.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium Com15] gi|257837561|gb|EEV62635.1| glycine betaine/L-proline ABC transporter [Enterococcus faecium Com15] Length = 575 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 16/242 (6%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAM 76 N+ ++ L I ++ I I + + ++ + L T +L + Sbjct: 46 NLLLVIPAPLFILLLTIAAFFISKKRPGLTLFTLIGLWFIYNQGLWNDLMNTVTLVLLSS 105 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 VIS++ L AKS + +++ PILD MQ++P +L V +F G V G Sbjct: 106 VISIIIGVPLGILMAKSSKAQIIIKPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFA 162 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + IFA+ + + + +P++L E S SF + QK + L +P + ++ + Sbjct: 163 SVIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTSRQKLFKLELPLAKSTIMAGI 217 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + VV + MI PG+G + A++ + + ++ + + D Sbjct: 218 NQTTMLSLSMVVIASMI-------GAPGLGRGVLSALQRAQVGNGFVNGVALVILAIIID 270 Query: 257 QL 258 + Sbjct: 271 RF 272 Score = 80.7 bits (198), Expect = 6e-13, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 71/210 (33%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I N + D++ T+ V++ +I+ II +P+GI + I+P Sbjct: 81 GLWFIYNQGLWNDLMN-------TVTLVLLSSVISIIIGVPLGILMAKSSKAQIIIKPIL 133 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + + G P + E Sbjct: 134 DFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRFTNLGIRQVPKELVEA 189 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + SF T + + LP + G + + +++ + GLG Sbjct: 190 SDSFGSTSRQKLFKLELPLAKSTIMAGINQTTMLSLSMVVIASMIG-------APGLGRG 242 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + + + + ++RF Sbjct: 243 VLSALQRAQVGNGFVNGVALVILAIIIDRF 272 >gi|300172857|ref|YP_003772022.1| OpuABC protein [Leuconostoc gasicomitatum LMG 18811] gi|299887235|emb|CBL91203.1| OpuABC [Leuconostoc gasicomitatum LMG 18811] Length = 568 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 30/262 (11%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTLRMLSAMV 77 L A + + I + + I T I L + +L T ++ A V Sbjct: 45 GLTAIPMPLMIAGLTVIAILTTPKKYGFPLFTLIGLALIANQNLWSDLMSTVTLVIMASV 104 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ISL+ + AKS + ++ PILD MQ++P +L V +F G V G + Sbjct: 105 ISLVIGIPLGIITAKSPKTAAIVKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFAS 161 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 IFA + M + +P L E + SF + WQK L +P + ++ Sbjct: 162 IIFA-----LPPMVRMTDLGIRQVPVALVEAADSFGSTTWQKLIKLELPNARNTILAGAN 216 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++ VV + MI PG+G + A++ D+ + L ++ + + D+ Sbjct: 217 QTIMLALSMVVTASMI-------GAPGLGRGVLSAVQRADVGSGFVNGLGLVILAIIIDR 269 Query: 258 L------------LFRPMIVWS 267 RP W+ Sbjct: 270 FTQKLNTKPGQKVATRPWRRWA 291 Score = 85.7 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 18/210 (8%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + I N + D++ T+ V++ +I+ +I IP+GI P ++ ++P Sbjct: 79 GLALIANQNLWSDLMS-------TVTLVIMASVISLVIGIPLGIITAKSPKTAAIVKPIL 131 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P V+ V+ + + ++ G P E Sbjct: 132 DFMQTMPGFVYLIPAVAFFGIGVVPGVFASIIF----ALPPMVRMTDLGIRQVPVALVEA 187 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A SF T W+ + LP + GA A + + + + GLG Sbjct: 188 ADSFGSTTWQKLIKLELPNARNTILAGANQTIMLALSMVVTASMIG-------APGLGRG 240 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++ + L + + ++RF Sbjct: 241 VLSAVQRADVGSGFVNGLGLVILAIIIDRF 270 >gi|126740663|ref|ZP_01756349.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6] gi|126718178|gb|EBA14894.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6] Length = 654 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 89/536 (16%), Positives = 173/536 (32%), Gaps = 44/536 (8%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I L V + A T +L A+ I + A + +L PILD+MQ+IPI Sbjct: 132 IYLAVFGQWESAMVTLASVLIAVPIGAGGGLMAGIWAYRHPLGERILSPILDLMQTIPIF 191 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L + F ++A+ A M +L + ++ + R Sbjct: 192 AYLVPILFMFG--------FGPVSALVATIIYATPPMIRITILALKAVDPEILDFGRMAG 243 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 + Q W + VP + L+ + + V+ + MI G G+G + A+ Sbjct: 244 TTERQLMWRVLVPSASQSLMVGVNQVIMLTLNMVIIASMIGAG-------GLGFDVLAAL 296 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQL---LFRPM--------IVWSNKFRLERTTGIYPAD 282 + D+ A A + ++ + D+L M W + + A Sbjct: 297 RRLDIGAGFEAGIAIVVLAIAVDRLSQAFAERMGQIQHVQPGSWLARHKRTALVTTLLAV 356 Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY 342 +WVL F + L S N+ K F + F + Sbjct: 357 TWVLGQF--SPLLLTYPESQTITTGVFWNDTVKYLNVNYFDLFEAVKVFFLHWFLLPIKK 414 Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L + + + W+ G + ++ G IT++ +I+A Sbjct: 415 VLLGLPWPWAIAMLSLLGWRIGGAKLALLCAALSTLILISGLWSKAMITVYLCGASVILA 474 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 ++I +P+G+ + + L P+ V+ VV + + L + Sbjct: 475 TLIGVPLGVLAALNRRAGAVVNLLIDTLQTLPSFVYLIPVVMLFRVGDFTAMIAIVLYAL 534 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 Y G + E T W+ R + LP P + G A Sbjct: 535 APAVRY----AAHGVRNINEELIEAGLVSGCTKWQLLRLVRLPLALPEILLGINQTIMLA 590 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +++ + LG + + K ++ L + + +R + Sbjct: 591 LSMLVITALVGTRD-------LGQEVYIALTKADTGRGLVAGLAIAFVAIIADRLI 639 >gi|222153813|ref|YP_002562990.1| glycine-betaine binding permease [Streptococcus uberis 0140J] gi|222114626|emb|CAR43642.1| putative glycine-betaine binding permease protein [Streptococcus uberis 0140J] Length = 575 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 94/234 (40%), Gaps = 16/234 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +++ + + ++ +P + + L + T +L A IS++ Sbjct: 54 LLFILLVTVAVYFLARKKWPLPVFTFLGLLFIYNQG-LWVHLINTFTLVLVASFISIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKSSTVRHIINPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + I ++L E S +F + QK + +P + ++ + +M Sbjct: 170 PTVRF-----TNLGIREISKELIEASDAFGSTPKQKLLKVELPLAKNTIMAGINQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV MI PG+G + A++ D+ + L ++ + + D+ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGTGFVSGLALVILAIVLDR 271 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 68/232 (29%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L I V W + + + T V+V I+ I Sbjct: 51 INPLLFILLVTVAVYFLARKKWPLPVFTFLGLLFIYNQGLWVHLINTFTLVLVASFISII 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + I P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKSSTVRHIINPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + G + E + +F T + + LP + G A + Sbjct: 167 ALPPTVRFTNLGIREISKELIEASDAFGSTPKQKLLKVELPLAKNTIMAGINQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGTGFVSGLALVILAIVLDR 271 >gi|71902822|ref|YP_279625.1| glycine betaine transport system permease protein [Streptococcus pyogenes MGAS6180] gi|71801917|gb|AAX71270.1| glycine betaine-binding protein [Streptococcus pyogenes MGAS6180] Length = 575 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGVFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADVGSGFVSGLALVILAIVLDRM 272 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGVFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADVGSGFVSGLALVILAIVLDRM 272 >gi|260554118|ref|ZP_05826379.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Acinetobacter sp. RUH2624] gi|260404746|gb|EEW98255.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Acinetobacter sp. RUH2624] Length = 284 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 F ++ + +++ FW + G+A N T DV++ +W Sbjct: 20 FRQLRSYPARLKSYVIAFTSIAFWIAIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFF 79 Query: 385 ----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++FRVV+ ++A++I + +G+ G +++ + P ++L PA + Sbjct: 80 QLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWI 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + + G + IL N + G A A S + Sbjct: 140 PLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAII 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +I+PG P +TG G W + +E+ S G+G + ES ++ Sbjct: 196 HEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSN 249 Query: 555 VVLGVLIMCCFVLALNRFL 573 +V+G++++ + + + Sbjct: 250 IVVGMVLIGALGMFSSTLV 268 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 93/228 (40%), Gaps = 14/228 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +N+ P D++ + + + ++ + R++ V++ L LA Sbjct: 55 VNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVIGFVLAALIGVGIGLLAG 114 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + ++L L+P L++++ IP + ++ ++ F +E + IF F ++ + Sbjct: 115 RYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASMIFITFIGALFPIL 166 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S S + +P ++P ++ + + M WF +V +E Sbjct: 167 LNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAE 226 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 MI GIG + + Q+ I+ M+ + + L+ Sbjct: 227 MISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTLV 268 >gi|307331451|ref|ZP_07610568.1| Substrate-binding region of ABC-type glycine betaine transport system [Streptomyces violaceusniger Tu 4113] gi|306882894|gb|EFN13963.1| Substrate-binding region of ABC-type glycine betaine transport system [Streptomyces violaceusniger Tu 4113] Length = 872 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L+ I LL +P + + +D L A T +L A VI+++F Sbjct: 48 PLLFAGILALLAWWLRGLLPAVLAFLGFALIDSIELWGEAMNTLALVLVAGVITIVFAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+++R + V+ P+LD MQ++P +L + +F G V G IF++ Sbjct: 108 LGIWASRNRAVSAVIRPVLDFMQTMPAFVYLIPGIFFFGL---GVVPGVVATVIFSMPPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F + + P ++P ++ + + Sbjct: 165 -----VRMTELGIRQVDAELVEAADAFGTHPRRTLLRVQFPLALPTIMAGVNQVIMLALS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G+GS + AI D+ + ++ + D++ Sbjct: 220 MVVIAGMV-------GAEGLGSTVFQAISSVDVAMGFEGGIAVVILAMYLDRM 265 Score = 92.7 bits (229), Expect = 2e-16, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 80/228 (35%), Gaps = 16/228 (7%) Query: 350 CVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + G+ +AW G + F D + + T+ V+V +I + +P+ Sbjct: 49 LLFAGILALLAWWLRGLLPAVLAFLGFALIDSIELWGEAMNTLALVLVAGVITIVFAVPL 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW +S+ I+P + PA V+ + + ++ L + +IF + Sbjct: 109 GIWASRNRAVSAVIRPVLDFMQTMPAFVYL---IPGIFFFGLGVVPGVVATVIF-SMPPG 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F R + P P + G A + +++ Sbjct: 165 VRMTELGIRQVDAELVEAADAFGTHPRRTLLRVQFPLALPTIMAGVNQVIMLALSMVVIA 224 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + GLG+ + ++ G + + + L+R Sbjct: 225 GMVG-------AEGLGSTVFQAISSVDVAMGFEGGIAVVILAMYLDRM 265 >gi|254456657|ref|ZP_05070086.1| probable taurine uptake ABC transporter permease protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083659|gb|EDZ61085.1| probable taurine uptake ABC transporter permease protein [Candidatus Pelagibacter sp. HTCC7211] Length = 641 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 10/190 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV + ++ II +P+G+++G P +L P + PL++S + Sbjct: 450 SFLRVFLGLVFGIIIGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLIISVLGI-- 507 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N L+ + ++ + AGAS A S + + RY+I P P Sbjct: 508 --DNTGKIFLLFMVSLSIMIISARAGASGTQLSKIHAAHSLGASKKQILRYVIFPNSLPE 565 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G W + +E + TTG+G + + + + + + IM Sbjct: 566 ILTGIRVAVGMCWGTLVAAEFLAG------TTGIGFVENVAKKYFQYEVIWITIFIMGML 619 Query: 566 VLALNRFLWH 575 L + L Sbjct: 620 GLLFDVTLRK 629 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 17/210 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + LR+ +V ++ +R P++++ + +P L + + Sbjct: 445 GHIWDSFLRVFLGLVFGIIIGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLIISV 504 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 GK IF +F + M S + S S Q Y Sbjct: 505 LGIDNTGK--------IFLLFMVSLSIMIISARAGASGTQLSKIHAAHSLGASKKQILRY 556 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P S+P ++ + +++ W +VA+E + GIG +A K I Sbjct: 557 VIFPNSLPEILTGIRVAVGMCWGTLVAAEFLAGTT------GIGFVENVAKKYFQYEVIW 610 Query: 243 YAMLTMLGVIFLYDQLLFR---PMIVWSNK 269 + M + L+D L + I W K Sbjct: 611 ITIFIMGMLGLLFDVTLRKLIDRYIPWRGK 640 >gi|261820839|ref|YP_003258945.1| nitrate ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261604852|gb|ACX87338.1| nitrate ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 304 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 86/221 (38%), Gaps = 14/221 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 W + + Y + + W ++ RV + +A+++ IP G IG + Sbjct: 84 WTTWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFL 143 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ + P LL + P+ + + + + W ++ N G Sbjct: 144 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 199 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ + I+LP + P +TG + G AW + +E+ + G Sbjct: 200 IPQDYLNVARVLKLSEFTIMHKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGG---- 255 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR-FLW 574 G+G +I + +++ ++++ L L + +W Sbjct: 256 --VGIGFWIWNEWNNLNVENIIIAIVVIGVIGLLLEQGLVW 294 Score = 133 bits (335), Expect = 9e-29, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 110/280 (39%), Gaps = 24/280 (8%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPI 54 +F Y L + +++FP + L V V I + + Sbjct: 42 VFAYRPLLRKLFQQLFPAVLGLGLLVAVWQIAALNSENFPTPWTTWLAALSLFADPFYIA 101 Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 + + + R+ ++ L L + L +L PI+ +++ + L Sbjct: 102 GPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLA 161 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L ++ F P A+ + IF +W M + + + IP+D V+R +L Sbjct: 162 WLPIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKL 213 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 S + + +P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 214 SEFTIMHKILLPAVLPNVLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWIWNEWN 267 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 ++ I+ A++ + + L +Q ++ +N+F + Sbjct: 268 NLNVENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 303 >gi|147920986|ref|YP_685204.1| putative ABC-type sulfonate import system, permease component [uncultured methanogenic archaeon RC-I] gi|110620600|emb|CAJ35878.1| putative ABC-type sulfonate import system, permease component [uncultured methanogenic archaeon RC-I] Length = 257 Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 94/248 (37%), Gaps = 13/248 (5%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---IAWQSIGYIVNHFTYQDVLYVIWLGCI 385 ++ +L + W + + I ++ + Sbjct: 2 SRVSKILMQLSGILILIVVWQVATGVLGLVKPVILPPPSDVLLTTIDMVMDGELFMHAGY 61 Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + A ++ +P+GI +G+ IS + P ++L P + L + + Sbjct: 62 SLLRVILGFLAAVVVAVPLGIAMGWVREISYVVDPVIEVLRPIPPIAWIGLALLWFNIGL 121 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L+ G + IL N ++G EVA +F T + R +++P P Sbjct: 122 TS----AVFLVFIGAVFPILLNTVSGVRNVDRKLIEVAYTFGATDFEILRKVVMPAALPT 177 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG G W + +E+ + GLG I E++ +V++G++++ Sbjct: 178 IYTGMRVGMGIGWMCVVAAEMVA------VKFGLGNLILEASNFLQTDKVLVGMIMIGIL 231 Query: 566 VLALNRFL 573 L +N Sbjct: 232 GLLINVAF 239 Score = 126 bits (318), Expect = 9e-27, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 107/251 (42%), Gaps = 23/251 (9%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDV------HSLPQYASRTTLRMLSAMVIS 79 +L++ ++ + G+ P + + L L +A + LR++ + + Sbjct: 14 ILILIVVWQVATGVLGLVKPVILPPPSDVLLTTIDMVMDGELFMHAGYSLLRVILGFLAA 73 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 ++ R + V+ P++++++ IP + ++ +++F +A+ Sbjct: 74 VVVAVPLGIAMGWVREISYVVDPVIEVLRPIPPIAWIGLALLWFNIGLT--------SAV 125 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F +F V+ + + + N+ R L EV+ +F + ++ + +P ++P + M + Sbjct: 126 FLVFIGAVFPILLNTVSGVRNVDRKLIEVAYTFGATDFEILRKVVMPAALPTIYTGMRVG 185 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD--- 256 M GW VVA+EM+ V G+G+ I A +L M+ + + L + Sbjct: 186 MGIGWMCVVAAEMVAVK------FGLGNLILEASNFLQTDKVLVGMIMIGILGLLINVAF 239 Query: 257 QLLFRPMIVWS 267 Q++ + W Sbjct: 240 QIVGDRIFAWQ 250 >gi|311108302|ref|YP_003981155.1| nitrate ABC transporter permease [Achromobacter xylosoxidans A8] gi|310762991|gb|ADP18440.1| nitrate ABC transporter, permease protein [Achromobacter xylosoxidans A8] Length = 276 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 93/254 (36%), Gaps = 17/254 (6%) Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV----AIGIAWQSIGYIVNHFTY-- 373 + + R + + + W V + G+ W++ + + Y Sbjct: 14 IALWRERLELALRAVVGPVAGFALFVLVWQVVALRIPEIPTPGVTWRAAVELFSDPFYDN 73 Query: 374 -QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + W ++ RV + +A++I IP G IG + + P LL Sbjct: 74 GPNDKGIGWNLLASLERVAIGFGLAALIGIPAGFAIGRYAAVRAMFSPIVSLLRPVSPLA 133 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + N + + W ++ N G S P D+ VA +++ W+ Sbjct: 134 ----WLPLGLLLFKAANPAAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWK 189 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++LP + PY +TG + G AW + +E+ + G TG+G ++ + Sbjct: 190 VTTKVLLPAVLPYVLTGVRLSIGTAWLVIVAAEMLTGG------TGIGFWLWDEWNNLKV 243 Query: 553 PEVVLGVLIMCCFV 566 +V+ + ++ Sbjct: 244 EHIVIAIFVIGIVG 257 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 95/248 (38%), Gaps = 24/248 (9%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQY 64 R + + FVLV ++ + + I T V + D + Sbjct: 26 RAVVGPVAGFALFVLVWQVVALRIPEI--PTPGVTWRAAVELFSDPFYDNGPNDKGIGWN 83 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ ++ L + + + PI+ +++ + L +L ++ F Sbjct: 84 LLASLERVAIGFGLAALIGIPAGFAIGRYAAVRAMFSPIVSLLRPVSPLAWLPLGLLLFK 143 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 P AAI+AIF +W M + + +P+D V+R LS W+ + Sbjct: 144 AANP--------AAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVL 195 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +P ++ + +S+ W +VA+EM+ G GIG ++ + I+ A Sbjct: 196 LPAVLPYVLTGVRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIA 249 Query: 245 MLTMLGVI 252 + + V Sbjct: 250 IFVIGIVG 257 >gi|282165192|ref|YP_003357577.1| ABC transporter permease protein [Methanocella paludicola SANAE] gi|282157506|dbj|BAI62594.1| ABC transporter permease protein [Methanocella paludicola SANAE] Length = 258 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 10/209 (4%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + + + ++ RV++ ++A+++ IP+G+ +G+ P IS P ++ Sbjct: 41 DVFMTMLSMALDGSLFVNAGWSLLRVLLGFLVAAVVAIPMGVAMGWLPSISLVFDPVIEV 100 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + P + L + + L+ G + IL N I G EVA Sbjct: 101 IRPIPPIAWIGLALLWFGIGLNS----AIFLVFIGAFFPILLNTIDGVRNVDKRLIEVAY 156 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F W R ++LP P TG G W + +E+ + GLG I Sbjct: 157 TFGAGDWNVLRKVVLPAASPIIYTGMRVGMGIGWMCVVAAEMIA------VKFGLGNMIL 210 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 E + V++G+L + LA+N Sbjct: 211 EGSNLLQTDVVMVGMLTIGLMGLAINYIF 239 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 14/224 (6%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 L P D+ + SL A + LR+L +++ + Sbjct: 30 LFKWIVLPPPTDVFMTMLSMALDGSLFVNAGWSLLRVLLGFLVAAVVAIPMGVAMGWLPS 89 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 + +V P++++++ IP + ++ +++F +AIF +F + + + Sbjct: 90 ISLVFDPVIEVIRPIPPIAWIGLALLWFGIGL--------NSAIFLVFIGAFFPILLNTI 141 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + N+ + L EV+ +F W + +P + P + M + M GW VVA+EMI V Sbjct: 142 DGVRNVDKRLIEVAYTFGAGDWNVLRKVVLPAASPIIYTGMRVGMGIGWMCVVAAEMIAV 201 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G+ I ++ MLT+ + + + Sbjct: 202 K------FGLGNMILEGSNLLQTDVVMVGMLTIGLMGLAINYIF 239 >gi|317404717|gb|EFV85106.1| NrtB protein [Achromobacter xylosoxidans C54] Length = 242 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 13/219 (5%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 G+ WQ+ + + Y + + W ++ RV + +A+++ IPVG IG + Sbjct: 22 GVTWQAAVALFSDPFYDNGPNDKGIGWNLLASLQRVGIGFGLAALVGIPVGFAIGRYAPV 81 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 + P LL + N + + W ++ N G S Sbjct: 82 RAMFSPIVSLLRPVSPLA----WLPLGLLLFKAANPAAIWAIFICSIWPMIINTAVGVSR 137 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA +++ W+ ++LP + PY +TG + G AW + +E+ + G Sbjct: 138 VPQDYLNVARVLNLSEWKVTTKVLLPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGG---- 193 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 TG+G ++ + +V+ + ++ L L L Sbjct: 194 --TGIGFWLWDEWNNLKVEHIVIAIFVIGIVGLILETLL 230 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 99/259 (38%), Gaps = 24/259 (9%) Query: 22 LLAFVLVIGIINILLHGI------QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 FVLV ++ + + I + V + + + R+ Sbjct: 1 FALFVLVWQVVAMRIPEIPTPGVTWQAAVALFSDPFYDNGPNDKGIGWNLLASLQRVGIG 60 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 ++ L + + + PI+ +++ + L +L ++ F P Sbjct: 61 FGLAALVGIPVGFAIGRYAPVRAMFSPIVSLLRPVSPLAWLPLGLLLFKAANP------- 113 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 AAI+AIF +W M + + +P+D V+R LS W+ + +P +P ++ Sbjct: 114 -AAIWAIFICSIWPMIINTAVGVSRVPQDYLNVARVLNLSEWKVTTKVLLPAVLPYMLTG 172 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + +S+ W +VA+EM+ G GIG ++ + I+ A+ + V + Sbjct: 173 VRLSIGTAWLVIVAAEMLTGGT------GIGFWLWDEWNNLKVEHIVIAIFVIGIVGLIL 226 Query: 256 DQLLFRPMIVWSNKFRLER 274 + L ++ + +F Sbjct: 227 ETL----LVALARRFTYTE 241 >gi|116749646|ref|YP_846333.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] gi|116698710|gb|ABK17898.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] Length = 314 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 10/191 (5%) Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 + + +M R+ + +IA +I IP+G+ +G+ + P + L P + PL Sbjct: 115 HCLMCVIFSMGRIYLGFMIACLIGIPLGLMMGWNRTFKNFTFPTFESLRPIPVISWIPLS 174 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L+ G + I+ N + G + D+ + A S + I Sbjct: 175 VIMFPLTEHS----IVFLVFLGAFYPIVLNTLLGVESVRADYIQGALSLGSKPRHIFFDI 230 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILPG P TG G AW + +E+ + G+ GLG ES ++P ++L Sbjct: 231 ILPGALPSIFTGMTVGMGLAWVMVVAAEMVAGGY------GLGYMTWESYILIAYPRIIL 284 Query: 558 GVLIMCCFVLA 568 G+ I+ Sbjct: 285 GMFIIGACGYL 295 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 86/242 (35%), Gaps = 15/242 (6%) Query: 19 IFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 I L+ V++ ++ + P ++ + + R+ + Sbjct: 73 ILSLVIIVILWQLVTTYKIPPFTRVPSPNEVWKEAVAFIPSTHCLMCVIFSMGRIYLGFM 132 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 I+ L + +R P + ++ IP++ ++ +V+ F E + Sbjct: 133 IACLIGIPLGLMMGWNRTFKNFTFPTFESLRPIPVISWIPLSVIMF--------PLTEHS 184 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +F +F + + + + ++ D + + S F+ + +P ++P + M Sbjct: 185 IVFLVFLGAFYPIVLNTLLGVESVRADYIQGALSLGSKPRHIFFDIILPGALPSIFTGMT 244 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + M W VVA+EM+ G G+G + I+ M + +L Sbjct: 245 VGMGLAWVMVVAAEMVAGG------YGLGYMTWESYILIAYPRIILGMFIIGACGYLSST 298 Query: 258 LL 259 +L Sbjct: 299 VL 300 >gi|160897817|ref|YP_001563399.1| nitrate ABC transporter inner membrane subunit [Delftia acidovorans SPH-1] gi|160363401|gb|ABX35014.1| nitrate ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 313 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV V +A+++ IP G IG +S P LL + P+ + Sbjct: 115 VGWNVLASLQRVAVGFGLAALVGIPAGFVIGRFNFLSRMFNPLISLLRPVSPLAWLPIGL 174 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + + W +L N G P D+ VA +++ W+ I+ Sbjct: 175 LVFK----GANPAAIWTIFICSIWPMLINTAVGVQRVPQDYMNVARVLNLSEWKIATTIL 230 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG A G AW + +E+ + G G+G ++ + + +++ Sbjct: 231 FPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVKNIIIA 284 Query: 559 VLIMCCFVLALNRFL 573 + ++ L L L Sbjct: 285 IFVIGIVGLLLEMAL 299 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 84/205 (40%), Gaps = 14/205 (6%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + R+ ++ L + + L + P++ +++ + L +L ++ Sbjct: 117 WNVLASLQRVAVGFGLAALVGIPAGFVIGRFNFLSRMFNPLISLLRPVSPLAWLPIGLLV 176 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F P AAI+ IF +W M + + +P+D V+R LS W+ Sbjct: 177 FKGANP--------AAIWTIFICSIWPMLINTAVGVQRVPQDYMNVARVLNLSEWKIATT 228 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + P +P ++ + +++ W +VA+EM+ G GIG ++ ++ I+ Sbjct: 229 ILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVKNII 282 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWS 267 A+ + V L + L + ++ Sbjct: 283 IAIFVIGIVGLLLEMALVKLATAFT 307 >gi|227112289|ref|ZP_03825945.1| nitrate transporter permease component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 305 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 87/221 (39%), Gaps = 14/221 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 W + + Y + + W ++ RV + +A+++ IP G IG + Sbjct: 85 WTTWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFL 144 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ + P LL + P+ + + + + W ++ N G Sbjct: 145 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 200 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ + R I+LP + P +TG + G AW + +E+ + G Sbjct: 201 IPQDYLNVARVLKLSEFTIMRKILLPAVLPNMLTGVRLSIGVAWLVIVAAEMLTGG---- 256 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR-FLW 574 G+G +I + +++ ++++ L L + +W Sbjct: 257 --VGIGFWIWNEWNNLNVENIIIAIVVIGVIGLLLEQGLVW 295 Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 109/277 (39%), Gaps = 24/277 (8%) Query: 4 YNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPITLD 57 Y +L + +++FP + L V V I + + + Sbjct: 46 YRLLLRKLFQQLFPAVLGLGLLVAVWQIAALNSENFPTPWTTWLAALSLFADPFYIAGPN 105 Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 + + R+ ++ L L + L +L PI+ +++ + L +L Sbjct: 106 DQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAWLP 165 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 ++ F P A+ + IF +W M + + + IP+D V+R +LS + Sbjct: 166 IGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLSEF 217 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + +P +P ++ + +S+ W +VA+EM+ G GIG +I + Sbjct: 218 TIMRKILLPAVLPNMLTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWIWNEWNNLN 271 Query: 238 LLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 + I+ A++ + + L +Q ++ +N+F + Sbjct: 272 VENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 304 >gi|163850691|ref|YP_001638734.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|218529414|ref|YP_002420230.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|163662296|gb|ABY29663.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|218521717|gb|ACK82302.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 273 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 18/227 (7%) Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWL--------GCITMFRVVVLIIIASIIWIPVGI 406 A+ + W + + + + + WL +++RVVV + + + +P+G+ Sbjct: 41 AAVAVRWWAYLAPLEAYDPEHGSWFAWLFSGEMLHDAMASLYRVVVGFAVGAGLALPLGL 100 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 ++G I I P Q+L P + PL + N L+ G + +L Sbjct: 101 FMGSSDLIYRHINPLMQVLRPIPPIAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLM 156 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N IAG + A S + +R +ILP PY ++GA G A+ IV+E+ Sbjct: 157 NTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEM 216 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + GLG I E+ E +++ G+L + L ++ + Sbjct: 217 IA------VNNGLGFRILEAREYFWSDKIIAGMLTIGALGLVIDMAV 257 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 85/240 (35%), Gaps = 18/240 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81 +V+ + P + D + L + A + R++ + Sbjct: 34 PMVLPSPAAVAVRWWAYLAPLEAYDPEHGSWFAWLFSGEMLHDAMASLYRVVVGFAVGAG 93 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + + P++ +++ IP + ++ ++++F A+F Sbjct: 94 LALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPLSILWFGLGN--------APAVFL 145 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + ++ +RS S F + +P + P ++ + + Sbjct: 146 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIG 205 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + V+ +EMI V + G+G I A + I+ MLT+ + + D + R Sbjct: 206 TAFIVVIVAEMIAVNN------GLGFRILEAREYFWSDKIIAGMLTIGALGLVIDMAVSR 259 >gi|254439504|ref|ZP_05052998.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198254950|gb|EDY79264.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 510 Score = 140 bits (354), Expect = 6e-31, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + + YQ+V + LG ++FRV+V ++ + I IP+G +G P + + Sbjct: 302 IAKYGYQNVYLTVHLGF-SLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRP 360 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P PLV+ + L+ W + +G S A S Sbjct: 361 VPPLALIPLVIIWFGIGEVGK----IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLG 416 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + W+ R++I+P P TGA A G W + +E+ + G+G I ++ Sbjct: 417 ASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEEGIGKMITTAS 470 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + + ++LGV+I+ ++ + + R L Sbjct: 471 KFQNTDIILLGVIIIGLVGFGIDMLM-----RWAERSL 503 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 17/212 (8%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + + R++ ++ S PI++ M+ +P L + + Sbjct: 312 LTVHLGFSLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVI 371 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++F GK IF +F + +W M + + + + S S WQ Sbjct: 372 IWFGIGEVGK--------IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLGASRWQIL 423 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 ++ +P S+P + ++M W VVA+E++ + GIG I A K Q+ Sbjct: 424 RHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEE------GIGKMITTASKFQNTDI 477 Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 IL ++ + V F D L+ R ++ W K Sbjct: 478 ILLGVIIIGLVGFGIDMLMRWAERSLVPWKGK 509 >gi|315641134|ref|ZP_07896213.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus italicus DSM 15952] gi|315483142|gb|EFU73659.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Enterococcus italicus DSM 15952] Length = 579 Score = 140 bits (354), Expect = 6e-31, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 17/236 (7%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L +LV+ +I ++ G + V ++ ++ I +L T ++ + V+S++ Sbjct: 54 LVLILVVSLIAFIISGKKWGLVLFSLIGLLYIY--NQNLWSDLMSTVTLVIVSSVVSIII 111 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 AKS R ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 112 GVPLGIWMAKSDRAEKIIQPILDFMQTMPGFVYLIPAVAFFG---IGMVPGVFASVIFAL 168 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + IP++L E S SF +G Q+ + L +P + ++ + + Sbjct: 169 PPTVRF-----TNLGIRQIPKELVEASDSFGSTGKQRLFKLELPLAKSTILAGINQTTML 223 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + L ++ + + D+ Sbjct: 224 ALSMVVIASMI-------GAPGLGRGVLSALQHAQVGNGFVNGLALVILAIVMDRF 272 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 78/233 (33%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + ++ I ++ + G W + + + Y + T+ V+V +++ I Sbjct: 51 IHPLVLILVVSLIAFIISGKKWGLVLFSLIGLLYIYNQNLWSDLMSTVTLVIVSSVVSII 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ IQP + P V+ V+ + + Sbjct: 111 IGVPLGIWMAKSDRAEKIIQPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + G P + E + SF TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLGIRQIPKELVEASDSFGSTGKQRLFKLELPLAKSTILAGINQTTMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + + + + L + + ++RF Sbjct: 227 MVVIASMIG-------APGLGRGVLSALQHAQVGNGFVNGLALVILAIVMDRF 272 >gi|325110800|ref|YP_004271868.1| binding-protein-dependent transporters inner membrane component [Planctomyces brasiliensis DSM 5305] gi|324971068|gb|ADY61846.1| binding-protein-dependent transport systems inner membrane component [Planctomyces brasiliensis DSM 5305] Length = 253 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 10/242 (4%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 + + VS +L + V + + + F+ + C+++ RV Sbjct: 6 IRAWLPVSLVLIWYAMSASGLVTPLLLPNPVDVATSAFSLSWSGELFRHICVSLLRVFEG 65 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 ++A+++ I +G IG + Q L P +FPL V ++ Sbjct: 66 FLLAAVLGILIGSAIGLWATFDKTVDWLLQTLKPIPPIGWFPLAVLWFGIGEVSK----V 121 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 ++ G + IL NVI G + + E+A + I W+++R +I+PG P +TG Sbjct: 122 FIIFLGAFFPILINVIDGIRQADHRYIELAKVYEIGWWKFFRKVIVPGAMPSILTGLRVG 181 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G AW + +E+ + +G+G I ++ + V++G+L + ++ L Sbjct: 182 IGFAWTCVVAAELIA------AESGVGYLIVDARQTFRADVVIVGMLTIGLLGTLMDVAL 235 Query: 574 WH 575 Sbjct: 236 RQ 237 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 102/266 (38%), Gaps = 21/266 (7%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 F+ R P L+ + + + L P D+ L ++ + Sbjct: 3 AFLIRAWLPVSLVLIWYAMSASGLVTPLL----LPNPVDVATSAFSLSWSGELFRHICVS 58 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LR+ +++ + + + + +L ++ IP +G+ V++F Sbjct: 59 LLRVFEGFLLAAVLGILIGSAIGLWATFDKTVDWLLQTLKPIPPIGWFPLAVLWFGIG-- 116 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E++ +F IF + + ++ + E+++ + + W+ F + VP + Sbjct: 117 ------EVSKVFIIFLGAFFPILINVIDGIRQADHRYIELAKVYEIGWWKFFRKVIVPGA 170 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 MP ++ + + + W VVA+E+I G+G I A + ++ MLT+ Sbjct: 171 MPSILTGLRVGIGFAWTCVVAAELIA------AESGVGYLIVDARQTFRADVVIVGMLTI 224 Query: 249 LGVIFLYDQLLFR---PMIVWSNKFR 271 + L D L + ++ W FR Sbjct: 225 GLLGTLMDVALRQLDARLVKWRQPFR 250 >gi|329901029|ref|ZP_08272674.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Oxalobacteraceae bacterium IMCC9480] gi|327549276|gb|EGF33852.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Oxalobacteraceae bacterium IMCC9480] Length = 273 Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + ++ +M+RVVV ++ + + +P+G+ +G + + + P Q+L P Sbjct: 65 LKWAFSGELLIDTFNSMYRVVVGFLVGAGLALPLGLSMGASKRVYAWLNPLMQVLRPIPP 124 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + N L+ G + +L N IAG + + A + + Sbjct: 125 IAYIPLSILWFGLG----NPPAVFLIAIGAFFPVLINTIAGVRNVDSIYLRAARNLGASQ 180 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + ++LP PY ++G G A+ IV+E+ + GLG I E+ E Sbjct: 181 STLFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYF 234 Query: 551 SFPEVVLGVLIMCCFVLALN 570 +++ G++ + L ++ Sbjct: 235 WSDKIIAGMISIGMLGLVID 254 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 81/203 (39%), Gaps = 14/203 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + R++ ++ S+R+ L P++ +++ IP + ++ Sbjct: 71 GELLIDTFNSMYRVVVGFLVGAGLALPLGLSMGASKRVYAWLNPLMQVLRPIPPIAYIPL 130 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++++F P A+F I + + + + N+ +R+ S Sbjct: 131 SILWFGLGNPP--------AVFLIAIGAFFPVLINTIAGVRNVDSIYLRAARNLGASQST 182 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P ++ + + + + V+ +EMI V + G+G I A + Sbjct: 183 LFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIAVNN------GLGFRILEAREYFWS 236 Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261 I+ M+++ + + D + R Sbjct: 237 DKIIAGMISIGMLGLVIDLAVTR 259 >gi|229197192|ref|ZP_04323926.1| ABC transporter, permease protein [Bacillus cereus m1293] gi|228586305|gb|EEK44389.1| ABC transporter, permease protein [Bacillus cereus m1293] Length = 272 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 10/231 (4%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 ++ W V I + + ++ RV+ I+ +++ I Sbjct: 36 LILTIWSVVAKFSDPQFLPSPIAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNLVAI 95 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 PVG+ IG P + + P + P F L + + L+++ T + Sbjct: 96 PVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFMLWFGIGEQSK----IFLIMYATFF 151 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + N I G A D A S + W+ ++I+P PY TGA A G ++ A + Sbjct: 152 IVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIV 211 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +E+ + G+G I + + +G++I+ ++R Sbjct: 212 GAEMVA------ANEGIGYMIWNARLYFKTDWIFVGLVILGLMGFLMDRIF 256 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 99/255 (38%), Gaps = 15/255 (5%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 N + + I + + + ++ Q P ++ SL Y Sbjct: 17 NFKIGLQKKLLQSGIIAWILILTIWSVVAKFSD-PQFLPSPIAVLYGAIELSQNGSLFIY 75 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + LR+++ ++ L L + L + P+++ ++ IP L F+T +++F Sbjct: 76 IGVSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFMLWFG 135 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E + IF I + + +T + + + D +RS S WQ +++ Sbjct: 136 IG--------EQSKIFLIMYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVI 187 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + ++M + +V +EM+ + GIG I A I Sbjct: 188 IPAALPYIYTGAKLAMGSSFMAIVGAEMVAANE------GIGYMIWNARLYFKTDWIFVG 241 Query: 245 MLTMLGVIFLYDQLL 259 ++ + + FL D++ Sbjct: 242 LVILGLMGFLMDRIF 256 >gi|260575135|ref|ZP_05843136.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sp. SW2] gi|259022757|gb|EEW26052.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sp. SW2] Length = 655 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 90/542 (16%), Positives = 177/542 (32%), Gaps = 61/542 (11%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L V + A T ++ A+ I ++ V A S R + P+LD+MQ++P + Sbjct: 134 LAVFGQWESAMITLASIVIAVPIGVMGGLVLGVAAYLSPRFDRLQSPVLDLMQTVPTFAY 193 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L + F +AA+ A + M +L +IP ++ + +R + Sbjct: 194 LVPILFLFG--------FGPVAALLATVIYAMPPMVRITTLALRSIPPEINDFARMVGCT 245 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 GWQ+ + +P ++P L+ + + V+ + MI G G+G + A++ Sbjct: 246 GWQRLRKVLLPAALPDLMVGVNQVIMLSLNMVIIASMIGAG-------GLGFDVLNALRR 298 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL 295 D+ A + A L + + D+L S L SW+ R L Sbjct: 299 LDIGAGVEAGLAITALAVALDRL--------SQALALRAGLPDAATGSWIK---RHPKTL 347 Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN------------------ 337 + L + G + + L N Sbjct: 348 AVLALVLATGLLGLVWPWLQTYPKAGELSTKAFWSDLVKSININYFDQLEAWRTFVLTYM 407 Query: 338 -QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVV 391 V L + V + WQ + L+++ G T++ Sbjct: 408 LLPVKRFLLALPWPWVVALVTLAGWQLGRARLAALCLGLSLFLVAAGLWEQAMTTVYLCG 467 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 V +++A ++ +P+G+ I L P+ V+ VV + Sbjct: 468 VSVVVAVLVGLPLGVLAASNATAGKVIGGVIDTLQTLPSFVYLIPVVMLFRVGDFSAMTA 527 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 + L + Y G A P + E + T W+ I LP P + G Sbjct: 528 VVLYALAPAVRY----TAHGLRAVPEELVEAGTVCGCTPWQVLTRIRLPMALPDILLGVN 583 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 A + +++ + LG + + + ++ + + + +R Sbjct: 584 QTIMLALSMLVITALVGTRD-------LGQEVYIALTRADTGAGIVAGVCVAALAIIADR 636 Query: 572 FL 573 + Sbjct: 637 LI 638 Score = 72.6 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 76/245 (31%), Gaps = 19/245 (7%) Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395 + R + + V + + + ++L + ++ + Sbjct: 88 TEGRGRKAVTLVPPLSWIAVTVAMGTLGVYARNLWLGLGVGALFLYLAVFGQWESAMITL 147 Query: 396 IASIIWIPVGIWIG--------FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 + +I +P+G+ G P P L+ P + ++ + + Sbjct: 148 ASIVIAVPIGVMGGLVLGVAAYLSPRFDRLQSPVLDLMQTVPTFAYLVPILFLFGFGPVA 207 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 L + ++ + P + + A TGW+ R ++LP P + Sbjct: 208 ALLATVIY----AMPPMVRITTLALRSIPPEINDFARMVGCTGWQRLRKVLLPAALPDLM 263 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G + N I++ + G GLG + + + V L + + Sbjct: 264 VGVNQVIMLSLNMVIIASMIGAG-------GLGFDVLNALRRLDIGAGVEAGLAITALAV 316 Query: 568 ALNRF 572 AL+R Sbjct: 317 ALDRL 321 >gi|302546698|ref|ZP_07299040.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302464316|gb|EFL27409.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 873 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 93/233 (39%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI+ +L ++ P + +D L A T +L A I+++F Sbjct: 49 LLLAGILAVLAWWLRGLL-PAVLAFAGFALIDSIELWGEAMNTLALVLVAGAITIVFAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+++R + + P+LD MQ++P +L + +F G V G IF++ Sbjct: 108 LGIWASRNRGVSASIRPVLDFMQTMPAFVYLIPGIFFFGL---GVVPGVVATVIFSMPPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F + + +P ++P ++ + + Sbjct: 165 -----VRMTELGIRQVDAELVEAADAFGTHPRRTLLRVQLPLALPTIMAGINQVIMLALS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G+GS + AI D+ + ++ + D++ Sbjct: 220 MVVIAGMV-------GAEGLGSTVFQAISSVDVAMGFEGGIAVVILAMYLDRM 265 Score = 93.8 bits (232), Expect = 7e-17, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 81/228 (35%), Gaps = 16/228 (7%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 ++ G+ +AW G + + D + + T+ V+V I + +P+ Sbjct: 49 LLLAGILAVLAWWLRGLLPAVLAFAGFALIDSIELWGEAMNTLALVLVAGAITIVFAVPL 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW +S+ I+P + PA V+ + + ++ L + +IF + Sbjct: 109 GIWASRNRGVSASIRPVLDFMQTMPAFVYL---IPGIFFFGLGVVPGVVATVIF-SMPPG 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F R + LP P + G A + +++ Sbjct: 165 VRMTELGIRQVDAELVEAADAFGTHPRRTLLRVQLPLALPTIMAGINQVIMLALSMVVIA 224 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + GLG+ + ++ G + + + L+R Sbjct: 225 GMVG-------AEGLGSTVFQAISSVDVAMGFEGGIAVVILAMYLDRM 265 >gi|312141398|ref|YP_004008734.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311890737|emb|CBH50056.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 271 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 98/253 (38%), Gaps = 10/253 (3%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 + R + + L + + +V ++ + + + Sbjct: 2 SSRQPSRSRWSAWWPPLTAIAVAVLLWWFATTILVSDDSLIREFAPQEVLPALGGLIERG 61 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ +M+R++V + IA++I IP+G+ IG P + ++P Q L + P+ Sbjct: 62 VLLPDTAASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPIA 121 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V+ H + L+ W I+ N AG A VA S T + Sbjct: 122 VALFGIGHR----PVFFLIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTERLTAV 177 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LP I + TG A G AW + +E+ +GLG I + ++ ++ +V+ Sbjct: 178 VLPAIRGHLQTGLRVALGIAWVVLVPAEMLG------VQSGLGYQILNARDQLAYDQVMA 231 Query: 558 GVLIMCCFVLALN 570 +L++ L+ Sbjct: 232 VILVIGLLGFLLD 244 Score = 106 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 90/258 (34%), Gaps = 25/258 (9%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETT-----------VPRDIVDIVPITLDV 58 SR+ + + L + +LL T P++++ + ++ Sbjct: 1 MSSRQPSRSRWSAWWPPLTAIAVAVLLWWFATTILVSDDSLIREFAPQEVLPALGGLIER 60 Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+L + I+ + L + + + P+ ++ I L + Sbjct: 61 GVLLPDTAASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPI 120 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V F + F I + VW + + + I V+RS + + Sbjct: 121 AVALFGIGHRP--------VFFLIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTE 172 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + +P L + +++ W +V +EM+ V G+G I A + Sbjct: 173 RLTAVVLPAIRGHLQTGLRVALGIAWVVLVPAEMLGV------QSGLGYQILNARDQLAY 226 Query: 239 LAILYAMLTMLGVIFLYD 256 ++ +L + + FL D Sbjct: 227 DQVMAVILVIGLLGFLLD 244 >gi|209521333|ref|ZP_03270048.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia sp. H160] gi|209498218|gb|EDZ98358.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia sp. H160] Length = 148 Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats. Identities = 78/141 (55%), Positives = 102/141 (72%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 N +RR+ PN +D +AF L+I +I + G +T P + I+LD LP+Y Sbjct: 8 NRTANASARRLLPNAWDFIAFPLIICLIAMASIGFHQTLAPMSTLKTQVISLDPAHLPEY 67 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A RTTLRML+AMV SL+FT Y TLAAKSRR VLVPILDI+QS+P+LG+++FTV +F+ Sbjct: 68 AMRTTLRMLAAMVASLVFTLTYGTLAAKSRRAEKVLVPILDILQSVPVLGYISFTVTFFL 127 Query: 125 NLYPGKVIGAELAAIFAIFTS 145 L+PG+V+GAELAAIFAIFTS Sbjct: 128 ALFPGRVLGAELAAIFAIFTS 148 >gi|288962927|ref|YP_003453221.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] gi|288915193|dbj|BAI76677.1| sulfonate/nitrate/taurine transport system permease protein [Azospirillum sp. B510] Length = 277 Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + +++ +++RVV+ I + + +P+G+ +G P I + P Q+L P Sbjct: 69 ILWALSGEMLFDAWSSLYRVVLGFAIGAGLALPLGLAMGGNPRIHALFDPLMQVLRPIPP 128 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + N L+ G + +L N IAG + A + Sbjct: 129 IAYIPLAILWFGLG----NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYLRAARNLGAGK 184 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + +ILP PY + GA G A+ IVSE+ + +GLG I E+ E Sbjct: 185 LTMFLRVILPAATPYILAGARIGIGTAFIVVIVSEMIA------VNSGLGFRILEAREFM 238 Query: 551 SFPEVVLGVLIMCCFVLALN 570 +++ G+ + LA++ Sbjct: 239 WSDKIIAGMFTIGLLGLAID 258 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 83/240 (34%), Gaps = 18/240 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR----TTLRMLSAMVISLL 81 +V+ ++ +P + D + + +L + R++ I Sbjct: 38 PVVLPSPVQVVVRWWAYLLPTEPYDPATSSWILWALSGEMLFDAWSSLYRVVLGFAIGAG 97 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + R+ + P++ +++ IP + ++ +++F A+F Sbjct: 98 LALPLGLAMGGNPRIHALFDPLMQVLRPIPPIAYIPLAILWFGLGN--------APAVFL 149 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + ++ +R+ F + +P + P ++ + + Sbjct: 150 IAIGAFFPVLMNTIAGVRHVDGIYLRAARNLGAGKLTMFLRVILPAATPYILAGARIGIG 209 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + V+ SEMI V G+G I A + I+ M T+ + D + R Sbjct: 210 TAFIVVIVSEMIAVNS------GLGFRILEAREFMWSDKIIAGMFTIGLLGLAIDIGMNR 263 >gi|104781070|ref|YP_607568.1| ABC transporter permease [Pseudomonas entomophila L48] gi|95110057|emb|CAK14762.1| putative ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 251 Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 13/210 (6%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V +W +++ R++V +++A +I +P+G+ +G H+ + P Sbjct: 44 TLQSLVELLGQGEVYGHVW---VSLKRILVGLVLALLIGVPLGLLVGSYRHLEAATTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + + + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 I ++ ++ ++ E++ VL++ L+ Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFMLDAL 240 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 14/221 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+ P+ + + L + + + R+L +V++LL L R L Sbjct: 34 GLSARFSPQATLQSLVELLGQGEVYGHVWVSLKRILVGLVLALLIGVPLGLLVGSYRHLE 93 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 P ++ I L ++ V+ + F + + +W + + Sbjct: 94 AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + + ++SRS + W+ + VP + ++ + +++ W +V EM+ V Sbjct: 146 VRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G +I ++ +L + + F+ D L Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFMLDAL 240 >gi|206974538|ref|ZP_03235454.1| taurine ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217960446|ref|YP_002339008.1| taurine ABC transporter, permease protein [Bacillus cereus AH187] gi|222096497|ref|YP_002530554.1| alkanesulfonates transport system permease; sulfonate ABC transporter , permease [Bacillus cereus Q1] gi|229139641|ref|ZP_04268211.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26] gi|206747181|gb|EDZ58572.1| taurine ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217063782|gb|ACJ78032.1| taurine ABC transporter, permease protein [Bacillus cereus AH187] gi|221240555|gb|ACM13265.1| alkanesulfonates transport system permease; sulfonate ABC transporter, permease [Bacillus cereus Q1] gi|228643772|gb|EEL00034.1| ABC transporter, permease protein [Bacillus cereus BDRD-ST26] Length = 274 Score = 140 bits (352), Expect = 1e-30, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 10/231 (4%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 ++ W V I + + ++ RV+ I+ +++ I Sbjct: 38 LILTIWSVVANFSDPQFLPSPIAVLYGAIELSQNGSLFIYIGVSFLRVIAGWILGNLVAI 97 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 PVG+ IG P + + P + P F L + + L+++ T + Sbjct: 98 PVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFMLWFGIGEQSK----IFLIMYATFF 153 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + N I G A D A S + W+ ++I+P PY TGA A G ++ A + Sbjct: 154 IVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVIIPAALPYIYTGAKLAMGSSFMAIV 213 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +E+ + G+G I + + +G++I+ ++R Sbjct: 214 GAEMVA------ANEGIGYMIWNARLYFKTDWIFVGLVILGLMGFLMDRIF 258 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 99/255 (38%), Gaps = 15/255 (5%) Query: 5 NILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQY 64 N + + I + + + ++ Q P ++ SL Y Sbjct: 19 NFKIGLQKKLLQSGIIAWILILTIWSVVANFSD-PQFLPSPIAVLYGAIELSQNGSLFIY 77 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + LR+++ ++ L L + L + P+++ ++ IP L F+T +++F Sbjct: 78 IGVSFLRVIAGWILGNLVAIPVGLLIGRIPWLRALFDPVINFIRFIPPLAFITLFMLWFG 137 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E + IF I + + +T + + + D +RS S WQ +++ Sbjct: 138 IG--------EQSKIFLIMYATFFIVTINTITGVQAVEEDKIRSARSMGASEWQIMFHVI 189 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + ++M + +V +EM+ + GIG I A I Sbjct: 190 IPAALPYIYTGAKLAMGSSFMAIVGAEMVAANE------GIGYMIWNARLYFKTDWIFVG 243 Query: 245 MLTMLGVIFLYDQLL 259 ++ + + FL D++ Sbjct: 244 LVILGLMGFLMDRIF 258 >gi|119474985|ref|ZP_01615338.1| Binding-protein-dependent transport systems inner membrane component [marine gamma proteobacterium HTCC2143] gi|119451188|gb|EAW32421.1| Binding-protein-dependent transport systems inner membrane component [marine gamma proteobacterium HTCC2143] Length = 316 Score = 140 bits (352), Expect = 1e-30, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 78/190 (41%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+M R++ IA ++ + +G+ +G + + P+ +++ PA + PL + Sbjct: 122 LISMRRILFAYSIAVVLGVTIGVLVGRSRIARAAVLPYIEVIRPIPAVAWIPLAILMWPT 181 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + + G + I+ N I G P A S + +++LP Sbjct: 182 EESS----IVYITFLGALFPIILNTIHGVKETPEVLVRAAVSLGAKKMEVFWHVVLPAAL 237 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G G +W + + E+ S + G+G + ++ ++P++V+G+LI+ Sbjct: 238 PSIAAGLSIGMGISWFSLLAGEIISGQY------GIGYFTWDAYSMINYPDIVVGMLIIG 291 Query: 564 CFVLALNRFL 573 + Sbjct: 292 GLGTLSTYLI 301 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 90/227 (39%), Gaps = 17/227 (7%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P + L ++ + R+L A I+++ L +SR ++P Sbjct: 99 PSPTTVGAAFLSHLGDAEFYKHILISMRRILFAYSIAVVLGVTIGVLVGRSRIARAAVLP 158 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +++++ IP + ++ ++ + E + ++ F ++ + + + P Sbjct: 159 YIEVIRPIPAVAWIPLAILMW--------PTEESSIVYITFLGALFPIILNTIHGVKETP 210 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L + S + FW++ +P ++P + + + M WF ++A E+I Sbjct: 211 EVLVRAAVSLGAKKMEVFWHVVLPAALPSIAAGLSIGMGISWFSLLAGEIISG------Q 264 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVW 266 GIG + A + I+ ML + G+ L L+ RP + W Sbjct: 265 YGIGYFTWDAYSMINYPDIVVGMLIIGGLGTLSTYLIGLMMRPALRW 311 >gi|254453930|ref|ZP_05067367.1| taurine ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198268336|gb|EDY92606.1| taurine ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 420 Score = 140 bits (352), Expect = 1e-30, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 16/218 (7%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + + YQ+V + LG ++FRV+V ++ + I IP+G +G P + + Sbjct: 212 IAKYGYQNVYLTVHLGF-SLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRP 270 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P PLV+ + L+ W + +G S A S Sbjct: 271 VPPLALIPLVIIWFGIGEVGK----IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLG 326 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + W+ R++I+P P TGA A G W + +E+ + G+G I ++ Sbjct: 327 ASRWQILRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEEGIGKMITTAS 380 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 + + ++LGV+I+ ++ + + R L Sbjct: 381 KFQNTDIILLGVIIIGLVGFGIDMLM-----RWAERSL 413 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 17/212 (8%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + + R++ ++ S PI++ M+ +P L + + Sbjct: 222 LTVHLGFSLFRVIVGFMLGAAIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVI 281 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++F GK IF +F + +W M + + + + S S WQ Sbjct: 282 IWFGIGEVGK--------IFLLFLAALWIMAIAARSGVSGVRITKVHAAYSLGASRWQIL 333 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 ++ +P S+P + ++M W VVA+E++ + GIG I A K Q+ Sbjct: 334 RHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEE------GIGKMITTASKFQNTDI 387 Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 IL ++ + V F D L+ R ++ W K Sbjct: 388 ILLGVIIIGLVGFGIDMLMRWAERSLVPWKGK 419 >gi|253997022|ref|YP_003049086.1| nitrate ABC transporter inner membrane subunit [Methylotenera mobilis JLW8] gi|253983701|gb|ACT48559.1| nitrate ABC transporter, inner membrane subunit [Methylotenera mobilis JLW8] Length = 280 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V W ++ RV + +A++I IP+G IG ++ P LL + P+ + Sbjct: 86 VGWNILASLQRVGLGFGLAALIGIPLGFIIGRFEFVARMTAPVISLLRPVSPLAWLPIGL 145 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N ++ W ++ N G + P D+ VA +++ W+ I+ Sbjct: 146 LVFKAA----NPAAIWVIFISAVWPMIINTAVGVNKVPQDYMNVAKVLNLSEWKIVTKIL 201 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P + PY +TG + G AW + +E+ + G G+G ++ + + +++ Sbjct: 202 FPFVLPYMMTGVRLSIGVAWLVIVAAEMLTGG------VGIGFWVWDEWNNLNVEHIIIA 255 Query: 559 VLIMCCFVLALNRFL 573 + I+ L L L Sbjct: 256 IFIVGIVGLLLEYAL 270 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 24/267 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINI---LLHGIQETTVPRDIVDIVPI---TLDVHSLPQYAS 66 R I P IF L V++ +I L G +T + P ++ + Sbjct: 32 RWILPPIFGLFFLVVIWAMIAAHTPELPGPIKTWASAVELFSDPFYDRGINDKGVGWNIL 91 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+ ++ L + + + + P++ +++ + L +L ++ F Sbjct: 92 ASLQRVGLGFGLAALIGIPLGFIIGRFEFVARMTAPVISLLRPVSPLAWLPIGLLVFKAA 151 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 P AAI+ IF S VW M + + +P+D V++ LS W+ + P Sbjct: 152 NP--------AAIWVIFISAVWPMIINTAVGVNKVPQDYMNVAKVLNLSEWKIVTKILFP 203 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 F +P ++ + +S+ W +VA+EM+ G GIG ++ ++ I+ A+ Sbjct: 204 FVLPYMMTGVRLSIGVAWLVIVAAEMLTGGV------GIGFWVWDEWNNLNVEHIIIAIF 257 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLE 273 + V L + L + + +F E Sbjct: 258 IVGIVGLLLEYALTQI----AKRFSYE 280 >gi|56751996|ref|YP_172697.1| sulfonate/nitrate transport system permease [Synechococcus elongatus PCC 6301] gi|81300915|ref|YP_401123.1| nitrate transport permease [Synechococcus elongatus PCC 7942] gi|2150109|gb|AAB58737.1| integral membrane protein [Synechococcus elongatus PCC 7942] gi|2330515|dbj|BAA21794.1| intrinsic membrane protein [Synechococcus elongatus PCC 7942] gi|56686955|dbj|BAD80177.1| sulfonate/nitrate transport system permease protein [Synechococcus elongatus PCC 6301] gi|81169796|gb|ABB58136.1| nitrate transport permease [Synechococcus elongatus PCC 7942] Length = 263 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 20/257 (7%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY--------- 373 +R P S V L I+ G S+ + + F + Sbjct: 2 VRTPVPLYLRWAVSILSVLAFLAIWQIAAASGFLGKTFPGSLRTLQDLFGWLSDPFFDNG 61 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + L + W I++ RV + ++A+++ IP+GI IG SS PF QLL + Sbjct: 62 PNDLGIGWNLLISLRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAW 121 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + L +++ + W L N G + DF +V+ S + WR Sbjct: 122 LPIGLFLFR----DSELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRT 177 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 +ILP P + G + G AW + +E+ TG+G +I S P Sbjct: 178 ILKVILPAALPSIIAGMRISMGIAWLVIVAAEMLLG-------TGIGYFIWNEWNNLSLP 230 Query: 554 EVVLGVLIMCCFVLALN 570 + ++I+ + L+ Sbjct: 231 NIFSAIIIIGIVGILLD 247 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 80/198 (40%), Gaps = 15/198 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ +++ + S + P + +++ + L +L Sbjct: 66 GIGWNLLISLRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAWLPIG 125 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + F + +EL +F I S +W + + N+ D +VS+S S W+ Sbjct: 126 LFLFRD--------SELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRT 177 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P ++P ++ M +SM W +VA+EM++ GIG +I L Sbjct: 178 ILKVILPAALPSIIAGMRISMGIAWLVIVAAEMLLG-------TGIGYFIWNEWNNLSLP 230 Query: 240 AILYAMLTMLGVIFLYDQ 257 I A++ + V L DQ Sbjct: 231 NIFSAIIIIGIVGILLDQ 248 >gi|73661766|ref|YP_300547.1| nitrate/sulfonate/bicarbinate ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494281|dbj|BAE17602.1| putative ABC-type nitrate sulfonate taurine bicarbonate transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 253 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I++FR +V ++A +I +P+G +G + I+P QL+ + P Sbjct: 54 GEIFSHLFISLFRFIVGFVLAILIGVPIGFLLGRVNALFHAIEPLLQLIRPISPIAWSPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV +L ++ + I+FN I G + ++AS+ ++TGW+ ++ Sbjct: 114 VVLWFGIG----SLPAMAIIFIAAFFPIVFNTIKGIRHIEPQYLKIASNLNLTGWQLYKN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKHIMGGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 100/251 (39%), Gaps = 14/251 (5%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 + P I ++ + +I I + P + + + + + + Sbjct: 4 ALTKKFTLPIISFIIFLFIWQCVIWIGNYQPILLPGPLLVAKSIWQFIISGEIFSHLFIS 63 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R + V+++L L + L + P+L +++ I + + F V++F Sbjct: 64 LFRFIVGFVLAILIGVPIGFLLGRVNALFHAIEPLLQLIRPISPIAWSPFVVLWFGIG-- 121 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 L A+ IF + + + F+ + + +I +++ + L+GWQ + + P + Sbjct: 122 ------SLPAMAIIFIAAFFPIVFNTIKGIRHIEPQYLKIASNLNLTGWQLYKNILFPGA 175 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 ++ + M++ W F+V+ EMI G+G I A +L +L A+ + Sbjct: 176 FKHIMGGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229 Query: 249 LGVIFLYDQLL 259 F+ D+ + Sbjct: 230 GLFGFIIDRFI 240 >gi|240137745|ref|YP_002962217.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|254560317|ref|YP_003067412.1| alkanesulfonate ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|240007714|gb|ACS38940.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|254267595|emb|CAX23437.1| alkanesulfonate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens DM4] Length = 261 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 10/203 (4%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 F + ++ +++RVVV + + + +P+G+++G I I P Q+L P Sbjct: 53 FAWLFSGEMLHDAMASLYRVVVGFAVGAGLALPLGLFMGSSDLIYRHINPLMQVLRPIPP 112 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + N L+ G + +L N IAG + A S + Sbjct: 113 IAYIPLSILWFGLG----NAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASR 168 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 +R +ILP PY ++GA G A+ IV+E+ + GLG I E+ E Sbjct: 169 MTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEMIA------VNNGLGFRILEAREYF 222 Query: 551 SFPEVVLGVLIMCCFVLALNRFL 573 +++ G+L + L ++ + Sbjct: 223 WSDKIIAGMLTIGALGLVIDMAV 245 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 85/240 (35%), Gaps = 18/240 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81 +V+ + P + D + L + A + R++ + Sbjct: 22 PMVLPSPAAVAVRWWAYLAPLEAYDPEHGSWFAWLFSGEMLHDAMASLYRVVVGFAVGAG 81 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + + P++ +++ IP + ++ ++++F A+F Sbjct: 82 LALPLGLFMGSSDLIYRHINPLMQVLRPIPPIAYIPLSILWFGLGN--------APAVFL 133 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + ++ +RS S F + +P + P ++ + + Sbjct: 134 IAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASRMTIFRRVILPAATPYILSGARIGIG 193 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + V+ +EMI V + G+G I A + I+ MLT+ + + D + R Sbjct: 194 TAFIVVIVAEMIAVNN------GLGFRILEAREYFWSDKIIAGMLTIGALGLVIDMAVSR 247 >gi|325673186|ref|ZP_08152879.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325556021|gb|EGD25690.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 271 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 97/253 (38%), Gaps = 10/253 (3%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 + R + + L + + + ++ + + + Sbjct: 2 SSRQPSRSRWSAWWPPLTAIAVAVLLWWFATTILASDDSLIREFAPQEVLPALGGLIERG 61 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ +M+R++V + IA++I IP+G+ IG P + ++P Q L + P+ Sbjct: 62 VLLPDTAASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPIA 121 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V+ H + L+ W I+ N AG A VA S T + Sbjct: 122 VALFGIGHR----PVFFLIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTERLTAV 177 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LP I + TG A G AW + +E+ +GLG I + ++ ++ +V+ Sbjct: 178 VLPAIRGHLQTGLRVALGIAWVVLVPAEMLG------VQSGLGYQILNARDQLAYDQVMA 231 Query: 558 GVLIMCCFVLALN 570 +L++ L+ Sbjct: 232 VILVIGLLGFLLD 244 Score = 107 bits (267), Expect = 7e-21, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 90/258 (34%), Gaps = 25/258 (9%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETT-----------VPRDIVDIVPITLDV 58 SR+ + + L + +LL T P++++ + ++ Sbjct: 1 MSSRQPSRSRWSAWWPPLTAIAVAVLLWWFATTILASDDSLIREFAPQEVLPALGGLIER 60 Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+L + I+ + L + + + P+ ++ I L + Sbjct: 61 GVLLPDTAASMWRLLVGLSIAAVIGIPLGLLIGLNPTVDRAVRPVTQFLRMISPLSWAPI 120 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V F + F I + VW + + + I V+RS + + Sbjct: 121 AVALFGIGHRP--------VFFLIAAAAVWPIVINTAAGVHAIDPGHLLVARSMGATRTE 172 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + +P L + +++ W +V +EM+ V G+G I A + Sbjct: 173 RLTAVVLPAIRGHLQTGLRVALGIAWVVLVPAEMLGV------QSGLGYQILNARDQLAY 226 Query: 239 LAILYAMLTMLGVIFLYD 256 ++ +L + + FL D Sbjct: 227 DQVMAVILVIGLLGFLLD 244 >gi|170738807|ref|YP_001767462.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168193081|gb|ACA15028.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 288 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 90/255 (35%), Gaps = 10/255 (3%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 L R L + + + + + + A+ A ++ T Sbjct: 22 LRRRLAGWAERAALPLVLVAGWEAFARSGALPPALLPAPSAVLHALADWMLGLDESTQSS 81 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 + ++ RV+ IA++ + +G+ IG+ + ++P Q+L P + P Sbjct: 82 SGHWPSDALASLSRVLAGYAIAALCGVGLGVAIGWWRLVERTVEPTLQMLRPIPPVSWIP 141 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L + L+ G + IL N I G + + + + + Sbjct: 142 LAIIWFGIADR----PAIFLVFLGAFFPILMNTIHGVRSVDRNLIRAGAMMGASERQLLA 197 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 I+LP P V+G A G AW ++ +E+ + +GLG + +S + V Sbjct: 198 RIVLPAALPAIVSGLRIAIGSAWMLTVTAEMVA------VKSGLGYVLWDSYYFLRYDIV 251 Query: 556 VLGVLIMCCFVLALN 570 + ++ + + Sbjct: 252 LAAMISIGLLGYLSD 266 Score = 121 bits (304), Expect = 4e-25, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 81/203 (39%), Gaps = 14/203 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 P A + R+L+ I+ L R + + P L +++ IP + ++ Sbjct: 81 SSGHWPSDALASLSRVLAGYAIAALCGVGLGVAIGWWRLVERTVEPTLQMLRPIPPVSWI 140 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 +++F A+ AIF +F + + + + ++ R+L S Sbjct: 141 PLAIIWFGI--------ADRPAIFLVFLGAFFPILMNTIHGVRSVDRNLIRAGAMMGASE 192 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 Q + +P ++P +V + +++ W V +EM+ V G+G + + Sbjct: 193 RQLLARIVLPAALPAIVSGLRIAIGSAWMLTVTAEMVAVKS------GLGYVLWDSYYFL 246 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 +L AM+++ + +L D L Sbjct: 247 RYDIVLAAMISIGLLGYLSDLCL 269 >gi|319949524|ref|ZP_08023574.1| ABC transporter integral membrane subunit [Dietzia cinnamea P4] gi|319436814|gb|EFV91884.1| ABC transporter integral membrane subunit [Dietzia cinnamea P4] Length = 231 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 89/198 (44%), Gaps = 10/198 (5%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 D +I ++++R+V + +A+++ +P+G+W+G R + P Q L + Sbjct: 33 DRGVLISDAAVSLYRLVAGLAVAALLGVPLGLWLGLRRRAEAVAGPLVQFLRMISPLSWA 92 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P+ ++ N + L+ W I+ + +G A + +VA + +GW Sbjct: 93 PVAIAVFGIG----NEPVIFLVAAAAIWPIMLSTSSGVHAMDPGYLDVARTMGASGWERL 148 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +++P + P + G A G AW + +E+ +GLG I + ++ ++ + Sbjct: 149 TRVVIPAVRPAILGGIRLALGTAWIVLVPAEMLG------VRSGLGYQILNARDQLAYDQ 202 Query: 555 VVLGVLIMCCFVLALNRF 572 V+ +L++ AL+ Sbjct: 203 VMAVILVIGVLGFALDSL 220 Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 14/203 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 LD L A+ + R+++ + ++ L RR V P++ ++ I L + Sbjct: 32 LDRGVLISDAAVSLYRLVAGLAVAALLGVPLGLWLGLRRRAEAVAGPLVQFLRMISPLSW 91 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + F IF + + +W + S + + +V+R+ S Sbjct: 92 APVAIAVFGIGN--------EPVIFLVAAAAIWPIMLSTSSGVHAMDPGYLDVARTMGAS 143 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 GW++ + +P P ++ + +++ W +V +EM+ V G+G I A + Sbjct: 144 GWERLTRVVIPAVRPAILGGIRLALGTAWIVLVPAEMLGV------RSGLGYQILNARDQ 197 Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258 ++ +L + + F D L Sbjct: 198 LAYDQVMAVILVIGVLGFALDSL 220 >gi|256783156|ref|ZP_05521587.1| ABC-transport protein, membrane component [Streptomyces lividans TK24] Length = 303 Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 21/267 (7%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--------TYQDVLYVI 380 E+ + + R L + V G+A+ A S G+ + T + Sbjct: 47 ESAPERSRSGRRGLPLVLNAVSVALGIALWWALASAGFKLPTPPEVVDRASTLIGDGTLA 106 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ RV++ + + + +PVG +G+ + I+P+ Q P PL V Sbjct: 107 DDALASLTRVLIGFGLGTAVAVPVGFLMGWYGILRGLIEPWIQFFRTIPPLAIIPLAVVA 166 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + ++ + + G A + +++P Sbjct: 167 MGI----DETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVP 222 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P+ + G G AW + +E+ + GLG + + P + +G++ Sbjct: 223 ASTPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLI 276 Query: 561 IMCCFVLALNRFLW---HPLYLYGTRC 584 + L ++R L L + R Sbjct: 277 SIGILGLLMDRVLLLAERRLTRWQERR 303 Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 97/264 (36%), Gaps = 17/264 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 RR P + + ++ L I + L + P ++VD + +L A + Sbjct: 53 SRSGRRGLPLVLNAVSVALGIALWWALASAGFKLPTPPEVVDRASTLIGDGTLADDALAS 112 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L + L L ++ P + ++IP L + VV Sbjct: 113 LTRVLIGFGLGTAVAVPVGFLMGWYGILRGLIEPWIQFFRTIPPLAIIPLAVVAMGIDET 172 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K IF IF + S +Q + N+ R L +R F + VP S Sbjct: 173 PK--------IFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVPAS 224 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 P ++ M + + W +VA+E+I G+G + A DL I ++++ Sbjct: 225 TPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLISI 278 Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269 + L D++L R + W + Sbjct: 279 GILGLLMDRVLLLAERRLTRWQER 302 >gi|219851713|ref|YP_002466145.1| binding-protein-dependent transport systems inner membrane component [Methanosphaerula palustris E1-9c] gi|219545972|gb|ACL16422.1| binding-protein-dependent transport systems inner membrane component [Methanosphaerula palustris E1-9c] Length = 269 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 9/197 (4%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ I++ RV+V + S+I IP+GI +G + Q+ P + PL Sbjct: 67 GSLVDNAIISLERVIVGFAVGSVIAIPLGIAMGRWALVHDLFDSLIQIFRPVPPLAWVPL 126 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ + + ++ GT + +L N + G + + E+A+ + R Sbjct: 127 ALAWFKIGLTS----MVFIIALGTFFPVLLNTLDGVRSVKKTWIEMAAILGANELQMLRT 182 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LP P TG G AW + +E+ ++GLG I S G P ++ Sbjct: 183 VVLPAALPTIWTGLRVGFGIAWMCVVAAEMMPG-----TSSGLGYLILYSYNFGQVPVII 237 Query: 557 LGVLIMCCFVLALNRFL 573 G++ + L ++ L Sbjct: 238 AGMIGIGVIGLGVDLLL 254 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 86/248 (34%), Gaps = 17/248 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV----HSLPQYASRTTLRMLSAMVI 78 + + + ++ I+++ ++ ++ SL A + R++ + Sbjct: 27 ILLIFLWELVAIVINNQFILPRLESVLMVIASPFTPILGTGSLVDNAIISLERVIVGFAV 86 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + + + + ++ I + +P L ++ + +F Sbjct: 87 GSVIAIPLGIAMGRWALVHDLFDSLIQIFRPVPPLAWVPLALAWFKIGLTSM-------- 138 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 +F I + + + + ++ + E++ + Q + +P ++P + + + Sbjct: 139 VFIIALGTFFPVLLNTLDGVRSVKKTWIEMAAILGANELQMLRTVVLPAALPTIWTGLRV 198 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 W VVA+EM+ + G+G I + + I+ M+ + + D L Sbjct: 199 GFGIAWMCVVAAEMMPGTSS-----GLGYLILYSYNFGQVPVIIAGMIGIGVIGLGVDLL 253 Query: 259 LFRPMIVW 266 L W Sbjct: 254 LGTVEKRW 261 >gi|332286228|ref|YP_004418139.1| ABC transporter permease protein [Pusillimonas sp. T7-7] gi|330430181|gb|AEC21515.1| ABC transporter permease protein [Pusillimonas sp. T7-7] Length = 257 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 10/191 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + + W ++ RV + ++A+ + IP+G IG P +++ P LL Sbjct: 56 PNDVGIGWNILASLSRVAIGFLLAAFVGIPIGFLIGRVPVVNAICSPVINLLRPISPLA- 114 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 + + + + W ++ N G P D+ VA +++ + Sbjct: 115 ---WLPLGLLLFKASDPAAIWAIFICSIWPMIINTADGVKRVPQDYLNVARVLNLSERKI 171 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + I+LP + PY +TG + G AW + +E+ + G TGLG ++ + + Sbjct: 172 FTRILLPSVLPYMMTGVRLSIGTAWLVIVAAEMLTGG------TGLGFWLWDEWNNLNVQ 225 Query: 554 EVVLGVLIMCC 564 +++ VL++ Sbjct: 226 NILIAVLVIGV 236 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 82/191 (42%), Gaps = 14/191 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + R+ +++ L + + + P++++++ I L +L Sbjct: 60 GIGWNILASLSRVAIGFLLAAFVGIPIGFLIGRVPVVNAICSPVINLLRPISPLAWLPLG 119 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F P AAI+AIF +W M + + +P+D V+R LS + Sbjct: 120 LLLFKASDP--------AAIWAIFICSIWPMIINTADGVKRVPQDYLNVARVLNLSERKI 171 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P +P ++ + +S+ W +VA+EM+ G G+G ++ ++ Sbjct: 172 FTRILLPSVLPYMMTGVRLSIGTAWLVIVAAEMLTGGT------GLGFWLWDEWNNLNVQ 225 Query: 240 AILYAMLTMLG 250 IL A+L + Sbjct: 226 NILIAVLVIGV 236 >gi|295111611|emb|CBL28361.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synergistetes bacterium SGP1] Length = 256 Score = 138 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 88/227 (38%), Gaps = 11/227 (4%) Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASIIWIPV 404 + W+ + + + + F V+ IT+ RV + + A I +P+ Sbjct: 19 LLWYFLARAIDRSLILPDFLVTMKTFFLGWFDKKVMSNLGITLMRVFMGCVYAVAIGLPL 78 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 G+ +G + P+ + P + PL + ++ + I Sbjct: 79 GLLMGSSRTALVALSPYVNSIRQVPIMAWVPLSIIWFGLGDG----PTIFMIAMSAVFPI 134 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 L N I+G ++K A W+ R +++PG P ++TG A GGAW + I + Sbjct: 135 LINTISGVMNIDPNYKNAARCMGAGTWQVLRDVVVPGALPSFLTGCRLALGGAWMSVICA 194 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 E + + G G + E+ + + P + +++ A+++ Sbjct: 195 EFIA------TSKGFGYIMVEAQVRMNTPLLYALMIMSALVGFAMDK 235 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 79/205 (38%), Gaps = 17/205 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T +R+ V ++ L SR + L P ++ ++ +PI+ ++ ++++F Sbjct: 60 TLMRVFMGCVYAVAIGLPLGLLMGSSRTALVALSPYVNSIRQVPIMAWVPLSIIWFGLGD 119 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IF I S V+ + + + NI + + +R WQ + VP Sbjct: 120 GP--------TIFMIAMSAVFPILINTISGVMNIDPNYKNAARCMGAGTWQVLRDVVVPG 171 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + +++ G W V+ +E I G G + A + + M+ Sbjct: 172 ALPSFLTGCRLALGGAWMSVICAEFIATSK------GFGYIMVEAQVRMNTPLLYALMIM 225 Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269 V F D+ LL + W K Sbjct: 226 SALVGFAMDKSIVLLEHSLTGWRYK 250 >gi|50121917|ref|YP_051084.1| nitrate transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612443|emb|CAG75893.1| nitrate transporter permease component [Pectobacterium atrosepticum SCRI1043] Length = 280 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 13/198 (6%) Query: 358 GIAWQSIGYIVNHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 W + + Y + + W ++ RV + +A+++ IP G IG + Sbjct: 60 WTTWLAALSLFADPFYIAGPNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFL 119 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 ++ + P LL + P+ + + + + W ++ N G Sbjct: 120 ANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASSWT----IFICSIWPMILNTAEGVRR 175 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P D+ VA ++ + R I+LP + P +TG + G AW + +E+ + G Sbjct: 176 IPQDYLNVARVLKLSEFTIMRKILLPAVLPNVLTGVRLSIGIAWLVIVAAEMLTGG---- 231 Query: 535 RTTGLGAYIAESTEKGSF 552 G+G +I + Sbjct: 232 --VGIGFWIWNEWNNLNV 247 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 109/279 (39%), Gaps = 24/279 (8%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINI------LLHGIQETTVPRDIVDIVPIT 55 F Y L + +++FP + L + V I + + Sbjct: 19 FAYRPLLRKLFQQLFPAVLGLGLLIAVWQIAALNSENFPTPWTTWLAALSLFADPFYIAG 78 Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + + + R+ ++ L L + L +L PI+ +++ + L + Sbjct: 79 PNDQGIGWNVLASLQRVGIGFGLAALVGIPAGFLIGRFTFLANMLNPIISLLRPVSPLAW 138 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L ++ F P A+ + IF +W M + + + IP+D V+R +LS Sbjct: 139 LPIGLLLFQRAEP--------ASSWTIFICSIWPMILNTAEGVRRIPQDYLNVARVLKLS 190 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P +P ++ + +S+ W +VA+EM+ G GIG +I Sbjct: 191 EFTIMRKILLPAVLPNVLTGVRLSIGIAWLVIVAAEMLTGGV------GIGFWIWNEWNN 244 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLER 274 ++ I+ A++ + + L +Q ++ +N+F + Sbjct: 245 LNVENIIIAIVVIGVIGLLLEQ----GLVWIANRFSYDN 279 >gi|195977325|ref|YP_002122569.1| glycine betaine transport system permease protein OpuAB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974030|gb|ACG61556.1| glycine betaine transport system permease protein OpuAB [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 576 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 99/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +++ + ++ +P + + + L T +L A +IS+L Sbjct: 54 LLFMLLVTCAMFFLARKKWPLPIFTLLGLLFVYNQG-LWAELINTFTLVLVASLISVLLG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS+ + V+ P+LD+MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKSKTVHQVINPMLDLMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F + QK + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRHIPTELVEASDAFGSTPKQKLLKVELPLAKHTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272 Score = 81.1 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L + W + + + + T V+V +I+ + Sbjct: 51 INPLLFMLLVTCAMFFLARKKWPLPIFTLLGLLFVYNQGLWAELINTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GIW+ + I P L+ PA V+ V+ + + Sbjct: 111 LGIPLGIWMAKSKTVHQVINPMLDLMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F T + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRHIPTELVEASDAFGSTPKQKLLKVELPLAKHTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272 >gi|148257774|ref|YP_001242359.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409947|gb|ABQ38453.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 269 Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 10/237 (4%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 L + S + + + AW + T + + ++ RV Sbjct: 20 LVGWEAFSRSGALPAALLPAPSTVVWAWTDWLVGTDGNTQTYSGHWVADMLASLSRVAAG 79 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 IA+++ + +G+ IG+ I I+P Q+L P + PL + N Sbjct: 80 FAIATVLGVALGVAIGWSRRIEIVIEPTLQMLRPIPPVSWIPLAIIWFGIA----NKPAI 135 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 L+ G + IL N I G + + + + + RYI++P P G Sbjct: 136 FLVFLGAFFPILLNTIHGVKSCDRNLIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIG 195 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW ++ +E+ + +GLG + +S + V+ + + + Sbjct: 196 IGSAWMLTVTAEMVA------VKSGLGYVLWDSYYFLRYDLVLAAMASIGLLGFCSD 246 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 17/206 (8%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ + I+ + SRR+ +V+ P L +++ IP + ++ +++F Sbjct: 69 MLASLSRVAAGFAIATVLGVALGVAIGWSRRIEIVIEPTLQMLRPIPPVSWIPLAIIWFG 128 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 A AIF +F + + + + + R+L S + Y+ Sbjct: 129 I--------ANKPAIFLVFLGAFFPILLNTIHGVKSCDRNLIRAGAMVGGSERKLLRYIV 180 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VP +MP + + + + W V +EM+ V G+G + + +L A Sbjct: 181 VPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKS------GLGYVLWDSYYFLRYDLVLAA 234 Query: 245 MLTMLGVIFLYD---QLLFRPMIVWS 267 M ++ + F D +L+ ++ W Sbjct: 235 MASIGLLGFCSDLSIRLVMARVLHWQ 260 >gi|312879364|ref|ZP_07739164.1| binding-protein-dependent transport systems inner membrane component [Aminomonas paucivorans DSM 12260] gi|310782655|gb|EFQ23053.1| binding-protein-dependent transport systems inner membrane component [Aminomonas paucivorans DSM 12260] Length = 274 Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 11/259 (4%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDV 376 R + L + ++W G+ S + + Sbjct: 7 RAGTRLPSERVPGPGGLSGLLLPGVIGLLWWGASRLGLWNPYLLPSPEQVFSSLGSLAAS 66 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + + R+ ++S++ +P+G+ +G RP + P + L P PL Sbjct: 67 GELARHVGASAGRIAAGFGLSSLVALPLGVLLGLRPRLGRLAYPTLEFLRHVPPLAVLPL 126 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ + +++ T + + N + G EV + ++ R Sbjct: 127 LILWFGIGEGSKMA----VILLATFFPVFLNTLEGVRRCDPGLLEVGRTLGLSEGEGVRR 182 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP P +TG G +W + I +E+ + +GLG I ++ +V Sbjct: 183 IVLPAALPSILTGLRLGLGYSWRSLIGAELIA------AASGLGYLIHDAEALSRPDVIV 236 Query: 557 LGVLIMCCFVLALNRFLWH 575 GVL++ A + + Sbjct: 237 AGVLVLGVIGAATDHLFFR 255 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 17/247 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L G + L P + + L ++ + R+ + +S L Sbjct: 34 LLWWGASRLGLWNPYLLPSPEQVFSSLGSLAASGELARHVGASAGRIAAGFGLSSLVALP 93 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L RLG + P L+ ++ +P L L +++F K+ LA F +F Sbjct: 94 LGVLLGLRPRLGRLAYPTLEFLRHVPPLAVLPLLILWFGIGEGSKMAVILLATFFPVF-- 151 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + L EV R+ LS + + +P ++P ++ + + + W Sbjct: 152 ------LNTLEGVRRCDPGLLEVGRTLGLSEGEGVRRIVLPAALPSILTGLRLGLGYSWR 205 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR---P 262 ++ +E+I G+G I A I+ +L + + D L FR Sbjct: 206 SLIGAELIAAAS------GLGYLIHDAEALSRPDVIVAGVLVLGVIGAATDHLFFRLAAR 259 Query: 263 MIVWSNK 269 + W + Sbjct: 260 VTPWRPR 266 >gi|166368071|ref|YP_001660344.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843] gi|166090444|dbj|BAG05152.1| ABC-transporter permease protein [Microcystis aeruginosa NIES-843] Length = 256 Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ + RV+V +++AS I +P+G+ IG + S + Q L + PL Sbjct: 59 GEIMPHILTSCRRVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFLRMISPLSWMPL 118 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + L + L+ W IL N AG +A + +A S T Sbjct: 119 AVMVLGIGDL----PVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQ 174 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 IILP I + +TG A G W + +E+ + GLG YI ++ ++ ++ E++ Sbjct: 175 IILPAILSHLLTGFRLAIGIIWIVLVPAEMLG------VSAGLGYYILDTRDRLAYSELM 228 Query: 557 LGVLIMCCFVLALN 570 +L++ L+ Sbjct: 229 AVILVIGAIGYLLD 242 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 72/196 (36%), Gaps = 14/196 (7%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + R++ +V++ L R L L + ++ I L ++ V+ Sbjct: 64 HILTSCRRVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFLRMISPLSWMPLAVMVL 123 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 +L F + + +W + + + + R ++ S + + + + Sbjct: 124 GIG--------DLPVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQI 175 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P + L+ +++ W +V +EM+ V G+G YI ++ Sbjct: 176 ILPAILSHLLTGFRLAIGIIWIVLVPAEMLGVSA------GLGYYILDTRDRLAYSELMA 229 Query: 244 AMLTMLGVIFLYDQLL 259 +L + + +L D L Sbjct: 230 VILVIGAIGYLLDWGL 245 >gi|303244148|ref|ZP_07330486.1| binding-protein-dependent transport systems inner membrane component [Methanothermococcus okinawensis IH1] gi|302485533|gb|EFL48459.1| binding-protein-dependent transport systems inner membrane component [Methanothermococcus okinawensis IH1] Length = 257 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 9/195 (4%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ I++ RV+ +IA I+ +P+GI +G+ I F +LL P + PL + Sbjct: 57 LVSNTIISIKRVLSGFLIAGIVAVPLGILMGYFSIIHDLFDTFIELLRPIPPLAWVPLAL 116 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++ G + IL N IAG + P E + +I Sbjct: 117 AWFGIGETS----MLFIIFIGAFFPILINTIAGVKSVPKILIESVQTLGAKEKDILLKVI 172 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P P +TG G AW + +E+ GLG I + VV Sbjct: 173 IPASSPGILTGLRVGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSRMDIVVAS 227 Query: 559 VLIMCCFVLALNRFL 573 ++I+ L+L+R L Sbjct: 228 MVIIGIIGLSLDRGL 242 Score = 114 bits (285), Expect = 6e-23, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 82/210 (39%), Gaps = 13/210 (6%) Query: 50 DIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQS 109 PI +L + R+LS +I+ + L + + +++++ Sbjct: 46 PQNPILGTGVNLVSNTIISIKRVLSGFLIAGIVAVPLGILMGYFSIIHDLFDTFIELLRP 105 Query: 110 IPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVS 169 IP L ++ + +F E + +F IF + + + + ++P+ L E Sbjct: 106 IPPLAWVPLALAWFGIG--------ETSMLFIIFIGAFFPILINTIAGVKSVPKILIESV 157 Query: 170 RSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYI 229 ++ + +P S PG++ + + W VVA+EM+ D G+G I Sbjct: 158 QTLGAKEKDILLKVIIPASSPGILTGLRVGAGIAWMCVVAAEMLPGSDA-----GLGYLI 212 Query: 230 ALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 A + ++ +M+ + + D+ L Sbjct: 213 MYAYSLSRMDIVVASMVIIGIIGLSLDRGL 242 >gi|125539527|gb|EAY85922.1| hypothetical protein OsI_07285 [Oryza sativa Indica Group] Length = 541 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 94/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q + ++ + + A T +L+A+ + Sbjct: 286 LLGMPAPIAILVFSLVAWQIAGLGMGAATLLSLVAIGAIGAWSQAMVTLALVLTALFFCI 345 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S+ V+ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 346 LIGLPLGIWLARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 402 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 403 A-----LPPIVRLTILGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTL 457 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 458 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAIGGVGIVILAIILDRL 508 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 97/301 (32%), Gaps = 21/301 (6%) Query: 274 RTTGIYPADSWVLYLFRKT--NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF 331 + P +L F K F ++ + + + VI F + Sbjct: 227 SSAPAQPEHFSLLDPFHKAWVPFDSWVTQGIDWLVLHFRPLFQGIRVPVDVILSGFQQLL 286 Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 L + + + + W G+ + + +T+ V+ Sbjct: 287 LGMPAPIAILVFSLVAWQIAGLGMGAATLLSLVAI--------GAIGAWSQAMVTLALVL 338 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 + +I +P+GIW+ H + I+P + PA V+ +V N+ Sbjct: 339 TALFFCILIGLPLGIWLARSKHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVP 394 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 ++ I I+ I G P D E A SF + + + LP P + G Sbjct: 395 GVVVTIIFALPPIVRLTILGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVN 454 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 A + +++ + + G GLG + + +G + + + L+R Sbjct: 455 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAIGGVGIVILAIILDR 507 Query: 572 F 572 Sbjct: 508 L 508 >gi|296109397|ref|YP_003616346.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus infernus ME] gi|295434211|gb|ADG13382.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus infernus ME] Length = 260 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 83/208 (39%), Gaps = 9/208 (4%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + ++ I++ RV+ IIAS++ +P+GI +G+ I++ +L Sbjct: 47 LLHPTVDLLGTGSLVSNALISIKRVLSGFIIASLLAVPLGILMGYFTVINALFDTVIELF 106 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL ++ ++ + ++ G + IL N I+G P E A + Sbjct: 107 RPIPPLAWVPLSLAWFGIGEVS----MVFIIFIGAFFPILINTISGVKGVPKPLIEAALT 162 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 +++P P +TG G AW + +E+ +GLG I Sbjct: 163 LGAKKRDILIKVVIPASSPSILTGLRVGIGIAWMCVVAAEMLPG-----SNSGLGYLITY 217 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + V+ ++++ L L+R L Sbjct: 218 AYSLSRMDIVIAAMIVIGLIGLILDRGL 245 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 85/204 (41%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L SL A + R+LS +I+ L L + + ++++ + IP L + Sbjct: 55 LGTGSLVSNALISIKRVLSGFIIASLLAVPLGILMGYFTVINALFDTVIELFRPIPPLAW 114 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + ++ +F E++ +F IF + + + + +P+ L E + + Sbjct: 115 VPLSLAWFGIG--------EVSMVFIIFIGAFFPILINTISGVKGVPKPLIEAALTLGAK 166 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + +P S P ++ + + + W VVA+EM+ ++ G+G I A Sbjct: 167 KRDILIKVVIPASSPSILTGLRVGIGIAWMCVVAAEMLPGSNS-----GLGYLITYAYSL 221 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ AM+ + + + D+ L Sbjct: 222 SRMDIVIAAMIVIGLIGLILDRGL 245 >gi|269125702|ref|YP_003299072.1| binding-protein-dependent transport systems inner membrane component [Thermomonospora curvata DSM 43183] gi|268310660|gb|ACY97034.1| binding-protein-dependent transport systems inner membrane component [Thermomonospora curvata DSM 43183] Length = 269 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 97/272 (35%), Gaps = 10/272 (3%) Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 P++ + G + + L + + + + ++ Sbjct: 5 LRPIAPARSRPPAGSGGASRRWRAPWPPLACLALAVALWWLLTSVIGADDRLLSSFAPQR 64 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + + ++ +++R+V+ ++IA+++ +P+G+ IG +P Q L Sbjct: 65 AVPAIGDLAERGVLVEDTLTSLWRLVMGLLIAAVVGVPLGLGIGLSQTAERATRPVLQFL 124 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + P+ V + + L+ W I+ N AG A VA S Sbjct: 125 RMISPLSWAPVAVGLFGIG----SEPVFFLVAAAAVWPIVLNTAAGVRAVDPGHILVARS 180 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 ++LP + +TG A G AW + +E+ +GLG I Sbjct: 181 LGARRGEILGSVVLPSARAHVLTGLRLALGIAWVVLVPAEMLG------VDSGLGYQILN 234 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 + ++ ++ +++ +L++ L+ L Sbjct: 235 ARDQLAYDQLMAVILVIGALGYVLDALARRAL 266 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 88/255 (34%), Gaps = 17/255 (6%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS---LPQYASRTT 69 R +P + L V + ++ ++ VP D+ L + + Sbjct: 27 RAPWPPLACLALAVALWWLLTSVIGADDRLLSSFAPQRAVPAIGDLAERGVLVEDTLTSL 86 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R++ ++I+ + S+ P+L ++ I L + V F Sbjct: 87 WRLVMGLLIAAVVGVPLGLGIGLSQTAERATRPVLQFLRMISPLSWAPVAVGLFGIG--- 143 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 F + + VW + + + + V+RS + + +P + Sbjct: 144 -----SEPVFFLVAAAAVWPIVLNTAAGVRAVDPGHILVARSLGARRGEILGSVVLPSAR 198 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 ++ + +++ W +V +EM+ V G+G I A + ++ +L + Sbjct: 199 AHVLTGLRLALGIAWVVLVPAEMLGVDS------GLGYQILNARDQLAYDQLMAVILVIG 252 Query: 250 GVIFLYDQLLFRPMI 264 + ++ D L R + Sbjct: 253 ALGYVLDALARRALA 267 >gi|125975285|ref|YP_001039195.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum ATCC 27405] gi|256003055|ref|ZP_05428047.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 2360] gi|281419275|ref|ZP_06250291.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum JW20] gi|125715510|gb|ABN54002.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum ATCC 27405] gi|255992746|gb|EEU02836.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 2360] gi|281407141|gb|EFB37403.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum JW20] gi|316939448|gb|ADU73482.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 1313] Length = 259 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ R + + A + I +G+ +G+ + S I+P Q+L +FP +V Sbjct: 62 VSLARFFIGYLAAIVAGITLGLLLGWNKSVWSFIEPVVQVLRPVSPIAWFPFIVLWFGIG 121 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +++ + IL + ++G + +VA SF I + IILP FP Sbjct: 122 DT----PAIVIIFIAGFFPILLSTVSGVGNVDAIYLKVADSFGIRQPQMLFKIILPAAFP 177 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G A G AW + E+ +GLG I ++ V+ G++ + Sbjct: 178 LIANGLHLALGSAWVFLVAGEMVG------AQSGLGYLIIDARNSLRSDLVLAGIIFIGA 231 Query: 565 FVLALNRFL 573 L L+R + Sbjct: 232 LGLLLDRLI 240 Score = 116 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 98/248 (39%), Gaps = 15/248 (6%) Query: 13 RRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +++ + + + + + + + P +++ + + +L + + R Sbjct: 7 KKVLKVVVSISVLIGIWQLAVLSGKYEPSLLPSPAKVLEGMAELIKDGTLLTHFRVSLAR 66 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 + +++ L ++ + + P++ +++ + + + F V++F Sbjct: 67 FFIGYLAAIVAGITLGLLLGWNKSVWSFIEPVVQVLRPVSPIAWFPFIVLWFGIG----- 121 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + AI IF + + + S + N+ +V+ SF + Q + + +P + P Sbjct: 122 ---DTPAIVIIFIAGFFPILLSTVSGVGNVDAIYLKVADSFGIRQPQMLFKIILPAAFPL 178 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + +++ W F+VA EM+ G+G I A +L ++ + + Sbjct: 179 IANGLHLALGSAWVFLVAGEMVG------AQSGLGYLIIDARNSLRSDLVLAGIIFIGAL 232 Query: 252 IFLYDQLL 259 L D+L+ Sbjct: 233 GLLLDRLI 240 >gi|282921823|ref|ZP_06329522.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A9765] gi|282593877|gb|EFB98867.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A9765] Length = 253 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L+ + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLSAIAIIFIAAFF----PIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 106/251 (42%), Gaps = 15/251 (5%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRT 68 + + I + F+ + ++ I+ H +V + V + Q+ + + Sbjct: 4 PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWSFIVTGEIFQHLAIS 63 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R ++ V++LL L ++R L + P+ +++ I + + F V++F Sbjct: 64 LWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 L+AI IF + + + F+ + + +I +++ + L+GW + + P + Sbjct: 122 ------SLSAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGA 175 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 ++ + M++ W F+V+ EMI G+G I A +L +L A+ + Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229 Query: 249 LGVIFLYDQLL 259 F+ D+ + Sbjct: 230 GLFGFIIDRFI 240 >gi|300918768|ref|ZP_07135339.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300414090|gb|EFJ97400.1| ABC transporter, permease protein [Escherichia coli MS 115-1] Length = 298 Score = 138 bits (347), Expect = 4e-30, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 19/264 (7%) Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---- 382 P + + + + +F + V Q+ + Sbjct: 43 VPLRPVASRHRWFLGFCFFVLFFALWALVTFTGLVSPTFLASPASMLQEGGLLFTDFDFT 102 Query: 383 --GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +T+ RV+ I+A II +P+GI +G I + +PF PA+ F PL++ Sbjct: 103 TDIGMTVMRVLGGFILACIIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILW 162 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + L++ G+ + I V A D E A + T R +I+P Sbjct: 163 AGIGEMQK----ILVIFIGSFFQITLMVAVAVGAARRDLVEAAYTLGATNKSVVRRVIIP 218 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P G AW IV+E+ ++G+G I S + +++ G++ Sbjct: 219 GAAPEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVNSQALLNTGQMIFGII 272 Query: 561 IMCCFVLALNRFLW---HPLYLYG 581 ++ C L + L+++ Sbjct: 273 VIGCIGLLSDLLFKAVNRRLFVWS 296 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 93/266 (34%), Gaps = 18/266 (6%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQY 64 + P R F + F + ++ L P ++ + Sbjct: 45 LRPVASRHRWFLGFCFFVLFFALWALVTFTGLVSPTFLASPASMLQEGGLLFTDFDFTTD 104 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T +R+L +++ + L + + P + + +P F+ +++ Sbjct: 105 IGMTVMRVLGGFILACIIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILWAG 164 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E+ I IF + +T + ++ RDL E + + + + Sbjct: 165 IG--------EMQKILVIFIGSFFQITLMVAVAVGAARRDLVEAAYTLGATNKSVVRRVI 216 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P + + + + W +V+ +E+I GIG I + + +++ Sbjct: 217 IPGAAPEIAELLRLVLGWAWTYVIVAELIGSSS------GIGHMIVNSQALLNTGQMIFG 270 Query: 245 MLTMLGVIFLYDQL---LFRPMIVWS 267 ++ + + L D L + R + VWS Sbjct: 271 IIVIGCIGLLSDLLFKAVNRRLFVWS 296 >gi|297191059|ref|ZP_06908457.1| ABC-transporter [Streptomyces pristinaespiralis ATCC 25486] gi|197723252|gb|EDY67160.1| ABC-transporter [Streptomyces pristinaespiralis ATCC 25486] Length = 304 Score = 138 bits (347), Expect = 4e-30, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 86/267 (32%), Gaps = 21/267 (7%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY--------IVNHFTYQDVLYVI 380 + + R L + VV G+ + A + G+ + T + Sbjct: 48 KAAPEQPRPGRRGLPLALNAVSVVLGIGVWWALSAAGFKLPAPPEVVSQAGTLIGNGMLA 107 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ RV+ + + +P+G +G+ P + I+P+ Q P PL + Sbjct: 108 DDILASLTRVLAGFALGTAAAVPIGFLMGWYPVLRGLIEPWIQFFRTIPPLAIIPLAIVV 167 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + ++ + + G A + +++P Sbjct: 168 MGI----DETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDVTIFARVVVP 223 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P+ + G G AW + +E+ + GLG + + P + +G++ Sbjct: 224 ASTPFILVGMRVGLGSAWATLVAAELVA------AQQGLGYRMQNAQLYYDLPTIFVGLI 277 Query: 561 IMCCFVLALNRFLW---HPLYLYGTRC 584 + L ++R L L + R Sbjct: 278 SIGILGLLMDRILLLAERKLTGWQERR 304 Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 17/264 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P RR P + ++ VL IG+ L + P ++V + L + Sbjct: 54 PRPGRRGLPLALNAVSVVLGIGVWWALSAAGFKLPAPPEVVSQAGTLIGNGMLADDILAS 113 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L+ + L L ++ P + ++IP L + +V Sbjct: 114 LTRVLAGFALGTAAAVPIGFLMGWYPVLRGLIEPWIQFFRTIPPLAIIPLAIVVMGIDET 173 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K IF IF + S +Q + N+ R L +R F + VP S Sbjct: 174 PK--------IFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDVTIFARVVVPAS 225 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 P ++ M + + W +VA+E++ G+G + A DL I ++++ Sbjct: 226 TPFILVGMRVGLGSAWATLVAAELVA------AQQGLGYRMQNAQLYYDLPTIFVGLISI 279 Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269 + L D++L R + W + Sbjct: 280 GILGLLMDRILLLAERKLTGWQER 303 >gi|221065520|ref|ZP_03541625.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] gi|220710543|gb|EED65911.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] Length = 268 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 71/190 (37%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +M RV +A+++ IP+G+ IG + + P Q+L P + PL + Sbjct: 73 LKSMSRVYGAFGLAALLGIPLGLVIGKNAAVRRFVDPTLQMLRPVPVTAWLPLSMIFFGV 132 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ G + I+ N G + E A+ G +R ++LP Sbjct: 133 GPN----AAIFLVFLGAFFPIVINTTFGVKSVEPRLFEAAAMLGCQGASMFRQVVLPAAM 188 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G G AW +V E+ GLGA I + V+ G++++ Sbjct: 189 PSIFNGLRLGHGIAWFLIVVGEM------TGVPEGLGAAIMDGRMLSRTDVVIAGMVVIG 242 Query: 564 CFVLALNRFL 573 +R L Sbjct: 243 FTGFVTDRLL 252 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 17/212 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L + ++ R+ A ++ L + K+ + + P L +++ +P+ +L + Sbjct: 67 TLGIHWLKSMSRVYGAFGLAALLGIPLGLVIGKNAAVRRFVDPTLQMLRPVPVTAWLPLS 126 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F AAIF +F + + + + ++ L E + G Sbjct: 127 MIFFGVG--------PNAAIFLVFLGAFFPIVINTTFGVKSVEPRLFEAAAMLGCQGASM 178 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F + +P +MP + + + WF +V EM V + G+G+ I Sbjct: 179 FRQVVLPAAMPSIFNGLRLGHGIAWFLIVVGEMTGVPE------GLGAAIMDGRMLSRTD 232 Query: 240 AILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268 ++ M+ + F+ D+LL ++ WS Sbjct: 233 VVIAGMVVIGFTGFVTDRLLVALNNRLLKWSP 264 >gi|227113615|ref|ZP_03827271.1| glycine betaine transporter membrane protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 417 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q ++ + ++ I + A T +L+A+ + Sbjct: 163 LLGMPAPIAILVFSLLAWQMSSFGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 222 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S R + P+LD MQ+ P +L V+ F G V G + IF Sbjct: 223 LIGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 279 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 280 A-----LPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 334 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 335 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 385 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 97/297 (32%), Gaps = 40/297 (13%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENF----LQLC 335 P DSWV T+ + ++ F + V + + P L Sbjct: 125 PLDSWV------THGIDWVVLHFRPVFQGVRVPVDFILSGFQQLLLGMPAPIAILVFSLL 178 Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395 + Q S+ + + + + AW IT+ V+ + Sbjct: 179 AWQMSSFGMGVATLLSLIAIGAIGAWS-------------------QAMITLALVLTALF 219 Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +I +P+GIW+ + I+P + PA V+ +V N+ ++ Sbjct: 220 FCVLIGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVV 275 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 I I+ I G P D E A SF + + + LP P + G Sbjct: 276 TIIFALPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLM 335 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A + +++ + + G GLG + + +G + + + L+R Sbjct: 336 LALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 385 >gi|146338568|ref|YP_001203616.1| ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146191374|emb|CAL75379.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 269 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 83/237 (35%), Gaps = 10/237 (4%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 L + S + + + AW + T + + ++ RV Sbjct: 20 LAGWEAFSRSGALPAALLPAPSTVVWAWADWLVGTDGNTQTYSGHWLADMLASLSRVAAG 79 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 IA+++ + +G+ IG+ I+P Q+L P + PL + N Sbjct: 80 FAIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFGIA----NKPAI 135 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 L+ G + IL N I G + + + + RYI++P P G Sbjct: 136 FLVFLGAFFPILLNTIHGVKTCDRNLIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIG 195 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW ++ +E+ + +GLG + +S + V+ + + + Sbjct: 196 IGSAWMLTVTAEMVA------VKSGLGYVLWDSYYFLRYDLVLAAMASIGLLGFCSD 246 Score = 116 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 76/195 (38%), Gaps = 14/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ + I+ + SR+ +V+ P L +++ IP + ++ +++F Sbjct: 69 MLASLSRVAAGFAIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFG 128 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 A AIF +F + + + + R+L S + Y+ Sbjct: 129 I--------ANKPAIFLVFLGAFFPILLNTIHGVKTCDRNLIRAGAMVGGSERKLLRYIV 180 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VP +MP + + + + W V +EM+ V G+G + + +L A Sbjct: 181 VPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKS------GLGYVLWDSYYFLRYDLVLAA 234 Query: 245 MLTMLGVIFLYDQLL 259 M ++ + F D ++ Sbjct: 235 MASIGLLGFCSDLVI 249 >gi|332974746|gb|EGK11662.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Desmospora sp. 8437] Length = 569 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 96/236 (40%), Gaps = 19/236 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + LV+ ++ L + + + +D + T +L+A ++S++ Sbjct: 52 VITALVLAVLVYLASRFSIALLTF----LGCLLIDNLGYWDASVETIALVLTATLLSIVI 107 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 L A++R ++ P+LD MQ++P +L V +F G V G + IF Sbjct: 108 GLPLGILTARNRSSQSLITPVLDFMQTMPAFVYLIPAVFFFAL---GAVPGIIASIIF-- 162 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + DL E + +F + QK + + +P + P ++ + ++ Sbjct: 163 ---SMPPTIRLTSLGIRQVSADLIEAADAFGSTSTQKLFKVQLPLAKPTIMAGINQTIML 219 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G+ + AI ++ L ++ + + D++ Sbjct: 220 SLSMVVIASMIGAG-------GLGTVVLQAITRLEVGRGFEGGLCIVIIAIVLDRV 268 Score = 95.0 bits (235), Expect = 4e-17, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 79/234 (33%), Gaps = 16/234 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L + V + + + + + T+ L + LG T+ V+ +++ Sbjct: 45 VLTAAPPVITALVLAVLVYLASRFSIALLTFLGCLLIDNLGYWDASVETIALVLTATLLS 104 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GI S I P + PA V+ V + + + + Sbjct: 105 IVIGLPLGILTARNRSSQSLITPVLDFMQTMPAFVYLIPAVFFFALGAVPGIIASIIF-- 162 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 + + G D E A +F T + + LP P + G + Sbjct: 163 --SMPPTIRLTSLGIRQVSADLIEAADAFGSTSTQKLFKVQLPLAKPTIMAGINQTIMLS 220 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + +++ + G GLG + ++ + G L + + L+R Sbjct: 221 LSMVVIASMIGAG-------GLGTVVLQAITRLEVGRGFEGGLCIVIIAIVLDR 267 >gi|308067985|ref|YP_003869590.1| glycine/betaine-binding protein precursor [Paenibacillus polymyxa E681] gi|305857264|gb|ADM69052.1| Glycine betaine-binding protein precursor [Paenibacillus polymyxa E681] Length = 618 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 22/243 (9%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L F+++IGII ++ +Q T ++ + I D T ++++ ++S++ Sbjct: 50 LVFIVIIGIIAFMIGRVQLTL--FTVIGFLLI--DNLGYWSETMNTLGLVITSALVSIVI 105 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 A S+ ++ P+LD MQ++P +L V +F G V G + IFAI Sbjct: 106 GIPIGIWCAYSKSASRIITPLLDFMQTMPAFVYLLPAVTFFSL---GVVPGVIASVIFAI 162 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +L E S +F + QK + + +P ++P L+ + ++ Sbjct: 163 P-----PTIRMTNLGIMQVSGELIEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIML 217 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---L 259 VV + MI GIG+ + A+ + + A L ++ + + D+ L Sbjct: 218 SLSMVVIASMI-------GAEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRFTQNL 270 Query: 260 FRP 262 F+P Sbjct: 271 FKP 273 Score = 93.1 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 82/226 (36%), Gaps = 13/226 (5%) Query: 349 FCVVCGVAIGIA--WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 F V+ G+ + Q + V F D L T+ V+ +++ +I IP+GI Sbjct: 52 FIVIIGIIAFMIGRVQLTLFTVIGFLLIDNLGYWSETMNTLGLVITSALVSIVIGIPIGI 111 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 W + S I P + PA V+ + V+++ L + +IF + Sbjct: 112 WCAYSKSASRIITPLLDFMQTMPAFVYL---LPAVTFFSLGVVPGVIASVIF-AIPPTIR 167 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 G + E + +F T + + LP P + G + + +++ + Sbjct: 168 MTNLGIMQVSGELIEASDAFGSTSAQKLFKVQLPLALPTLMAGINQTIMLSLSMVVIASM 227 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 G+GA + + + + L + + L+RF Sbjct: 228 IG-------AEGIGAVVYRAVTQLQIGKGFEAGLAVVVLAIVLDRF 266 >gi|257487776|ref|ZP_05641817.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330985354|gb|EGH83457.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008505|gb|EGH88561.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 283 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + VL+ I+ I + P +IV + L +L ++ S + LR+LS VI Sbjct: 40 VIIVLLEIIVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 98 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V+A SR L P ++SIP L ++ +++ E + I I Sbjct: 99 ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + ++ I R L EV + + S ++ + +P ++PGL + MS Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRNGMSL 210 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 211 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264 Query: 261 -RPMIVWSNKFRLERTTGI 278 + + W + F + G Sbjct: 265 EKRFLAWRDTFTGQSREGR 283 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 74/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG +W + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRNGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|290955278|ref|YP_003486460.1| glycine betaine ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260644804|emb|CBG67889.1| putative glycine betaine ABC transport system integral membrane protein [Streptomyces scabiei 87.22] Length = 672 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 75/522 (14%), Positives = 166/522 (31%), Gaps = 54/522 (10%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 F+ ++ R P L V + G ++ + + L + L Sbjct: 106 FVQELISQPSVGRPLP-QIGWLGVVGIAGYVSWAFGNWRVALLAVAGFTF----LGLQGL 160 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 Q + T +SA++++LLF A S R+ + P+LD MQ++P +L + Sbjct: 161 WQESMDTLALTVSAVLVALLFGIPLGVWAGLSDRVNRIATPLLDFMQTMPTFVYLAPLTL 220 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F+ +A A ++ +P E + S + Q Sbjct: 221 FFLIGG--------ASATIATVVYAAPPAIRITAHAIRTVPETTVEAADSLGATRRQALL 272 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P S +V + ++ V + +I PG+G + A++ D+ Sbjct: 273 KVLLPMSKRTVVMGVNQTIMAALAMVTIAALI-------DAPGLGKTVVQALQSLDVGTA 325 Query: 242 LYAMLTMLGVIFLYDQ-------------------LLFRPMIVWSNKFRLERTTGIYPAD 282 A L+++ + + D+ L +R ++ + + Sbjct: 326 FNAGLSIVVMAIVLDRVTTAASTREEEARRSKNRFLAWRRPLLGAGAVLTAVLVYMSHTY 385 Query: 283 SWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY 342 W + I ++ + + +N+ + + + + N Q + Sbjct: 386 VWAAEFPGEGGLGSSIASAADTTTTWVQDNLSGVTNAVRDLITNGLLNPFQSLLTDSPWW 445 Query: 343 MLDIFWFCVVCGV----AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398 ++ + + A +G +V + D T+ VV I+ Sbjct: 446 LVGAVLVALGVVLGGRRAGITTAVCVGLLVATGMWSD-------SMTTLASTVVATILVM 498 Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 ++ + G+W+G + ++P P V+ ++ + + Sbjct: 499 LLGVGFGVWMGRSRLVDRMLRPSLDAAQVMPPFVYLVPFLALFGATRFTAIVAAIVYAAP 558 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 I G P E A+S W+ + LP Sbjct: 559 VAMKII----ADGVRNVPATTVEAATSAGCNTWQIITKVQLP 596 >gi|253689683|ref|YP_003018873.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756261|gb|ACT14337.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 422 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q +++ + ++ I + A T +L+A+ + Sbjct: 168 LLGMPAPIAILVFSLLAWQMSSLGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 227 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S R + P+LD MQ+ P +L V+ F G V G + IF Sbjct: 228 LIGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 284 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 285 A-----LPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 339 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 340 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 390 Score = 99 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + P Sbjct: 130 PLDSWV------THGIDWVVLHFRPVFQGVRVPVDFILSGFQQFLLGMPAPI-------- 175 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F ++G+ ++ ++ + IT+ V+ + + Sbjct: 176 ---AILVFSLLAWQMSSLGMGVATLLSLIAIGAIGAWSQAM----ITLALVLTALFFCVL 228 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 229 IGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 284 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + + LP P + G A + Sbjct: 285 ALPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 344 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 345 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 390 >gi|33415329|gb|AAQ18182.1| NasE [Rhodobacter capsulatus] Length = 289 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 23/247 (9%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDI---------VPITLDVHSLPQYASRTTLRM 72 +L ++G+ L P DI L + R+ Sbjct: 45 VLVIAAILGLWQALSAPGAALPAPLDIWATSGDLIMHPFYVAGSQDMGLGWRVLTSLGRV 104 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 ++ + + + +S L + P+ +++++P L +L ++ FM+ P Sbjct: 105 GVGFGLAAVVGVIVGAVLGQSAWLMRGVDPLFQVLRTVPPLAWLPISLAAFMDSRP---- 160 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 +AIF IF + +W + + + IP+D V+ RL+ + F + VP + P + Sbjct: 161 ----SAIFVIFITAIWPILINTAAGVRAIPQDYRNVAAVLRLNPLEFFVKIMVPAAAPYI 216 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + + + W +VA+EM+ G GIG +I A L I A+L + Sbjct: 217 FSGLRIGVGLAWLAIVAAEMLTGGV------GIGFFIWDAWNSSMLTDIFVALLYIGATG 270 Query: 253 FLYDQLL 259 F D+L+ Sbjct: 271 FALDRLV 277 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 109/268 (40%), Gaps = 16/268 (5%) Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI---AWQSIGYIV 368 + R + R P + ++ +L ++ G A+ W + G ++ Sbjct: 20 ALPPPARKPILKRLQKPLVENVIPPVLVIAAILGLWQALSAPGAALPAPLDIWATSGDLI 79 Query: 369 NHFTY---QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 H Y + + W ++ RV V +A+++ + VG +G + + P Q+L Sbjct: 80 MHPFYVAGSQDMGLGWRVLTSLGRVGVGFGLAAVVGVIVGAVLGQSAWLMRGVDPLFQVL 139 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + P+ ++ ++ ++ W IL N AG A P D++ VA+ Sbjct: 140 RTVPPLAWLPISLAAF----MDSRPSAIFVIFITAIWPILINTAAGVRAIPQDYRNVAAV 195 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + ++ I++P PY +G G AW A + +E+ + G G+G +I + Sbjct: 196 LRLNPLEFFVKIMVPAAAPYIFSGLRIGVGLAWLAIVAAEMLTGG------VGIGFFIWD 249 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + ++ + +L + AL+R + Sbjct: 250 AWNSSMLTDIFVALLYIGATGFALDRLV 277 >gi|330961000|gb|EGH61260.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 282 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 18/258 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L VL+ I+ I + P +I+ + L +L ++ S + LR+LS +I Sbjct: 40 LVIVLLEIIVRIGWLPSYQMPAPSEILLTLR-DLADGALWKHISASLLRVLSGFLIGASL 98 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V+A SR L P ++SIP L ++ +++ K++ + A F + Sbjct: 99 ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSKIVMIAIGAFFPV 158 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + ++ I R L EV + + S ++ + +P ++PGL + MS Sbjct: 159 Y--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 211 AWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264 Query: 261 -RPMIVWSNKFRLERTTG 277 + + W + F + G Sbjct: 265 EKRFLAWRDTFNGQSREG 282 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 94/252 (37%), Gaps = 16/252 (6%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-- 385 PE L S R+ ++ V+ + + I W + L + G + Sbjct: 20 PERNLWQRSGTRLKGLVVPALVIVLLEIIVRIGWLPSYQMPAPSEILLTLRDLADGALWK 79 Query: 386 ----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 80 HISASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWL 139 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 + +++ G + + N +A EV + + +R R I+LP Sbjct: 140 GIGETSK----IVMIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPA 195 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P TG + AW + +E+ + T GLG +++ E V+ +++ Sbjct: 196 ALPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIV 249 Query: 562 MCCFVLALNRFL 573 + + L Sbjct: 250 LATLGKLSDGLL 261 >gi|197284311|ref|YP_002150183.1| glycine betaine transporter membrane protein [Proteus mirabilis HI4320] gi|194681798|emb|CAR41030.1| glycine betaine/L-proline ABC transporter, permease protein [Proteus mirabilis HI4320] Length = 409 Score = 137 bits (346), Expect = 5e-30, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 + I + +++ + + I I + A T +L++++ L+ Sbjct: 159 PVAIILFSLIAWQLSGKVMGISAF-ISLILIGAIGAWSEAMITLALVLTSLLFCLIIGLP 217 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A S R ++ P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 218 LGIWLAHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 270 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +P DL E ++SF + Q + + +P +MP ++ + ++ Sbjct: 271 -LPPIVRLTILGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 329 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ ++ + + D+L Sbjct: 330 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIILDRL 375 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 91/293 (31%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV + P+ + L + L + Q Sbjct: 115 PLDSWVTDGIDW--IVLHFRPIFQGIRVPVDLVLGGFENFLTSMPAPVAIILFSLIAWQL 172 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ I F + + AW IT+ V+ ++ I Sbjct: 173 SGKVMGISAFISLILIGAIGAWS-------------------EAMITLALVLTSLLFCLI 213 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ S ++P + PA V+ +V N+ ++ I Sbjct: 214 IGLPLGIWLAHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 269 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 270 ALPPIVRLTILGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 329 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + L+R Sbjct: 330 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIILDRL 375 >gi|297618911|ref|YP_003707016.1| binding-protein-dependent transport systems inner membrane component [Methanococcus voltae A3] gi|297377888|gb|ADI36043.1| binding-protein-dependent transport systems inner membrane component [Methanococcus voltae A3] Length = 253 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 9/208 (4%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + T +I I++ RV+ ++A + +P+GI +G+ ++ F +LL Sbjct: 40 LLNPTMTLLGTGTIIDNSIISITRVLTGFLVAFAVAVPLGIMMGYYKPVNDIFDTFMELL 99 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL ++ + + + F IL N +AG PN E + + Sbjct: 100 RPIPPLAWVPLTLAWFGVGSTSIIFIIFIGAFFP----ILINTVAGVKEVPNILVEASKT 155 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 TG R +I+P P +TG G AW + +E+ +GLG I Sbjct: 156 LGCTGINVLRKVIIPAASPSILTGLRVGAGIAWMCVVAAEMLPGSD-----SGLGYLIMY 210 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +V ++++ + L+R L Sbjct: 211 AYSLSRMDIIVAAMIVIGLIGIVLDRGL 238 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 98/244 (40%), Gaps = 19/244 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVHSLPQYASRTTLRMLSA 75 LL ++VI ++ + T +PR +++ L ++ + + R+L+ Sbjct: 8 LLPALVVIAWEVFAIYLGKPTVIPRLEAIVAVLLNPTMTLLGTGTIIDNSIISITRVLTG 67 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 +++ + + + + +++++ IP L ++ T+ +F + Sbjct: 68 FLVAFAVAVPLGIMMGYYKPVNDIFDTFMELLRPIPPLAWVPLTLAWFGVGSTSIIFIIF 127 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + A F I + + +P L E S++ +G + +P + P ++ Sbjct: 128 IGAFFPIL--------INTVAGVKEVPNILVEASKTLGCTGINVLRKVIIPAASPSILTG 179 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + + W VVA+EM+ D+ G+G I A + I+ AM+ + + + Sbjct: 180 LRVGAGIAWMCVVAAEMLPGSDS-----GLGYLIMYAYSLSRMDIIVAAMIVIGLIGIVL 234 Query: 256 DQLL 259 D+ L Sbjct: 235 DRGL 238 >gi|289627199|ref|ZP_06460153.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648668|ref|ZP_06480011.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868036|gb|EGH02745.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 283 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 VL+ I+ I + P +IV + L +L ++ S + LR+LS VI Sbjct: 40 AIIVLLEIIVRIGWLPSYQMPAPSEIVLTLS-DLADGALWKHISASLLRVLSGFVIGASL 98 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V+A SR L P ++SIP L ++ +++ E + I I Sbjct: 99 ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + ++ I R L EV + + S ++ + +P ++PGL + MS Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 211 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264 Query: 261 -RPMIVWSNKFRLERTTGI 278 + + W + F + G Sbjct: 265 EKRFLAWRDTFTGQSREGR 283 Score = 116 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + +W + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|302186230|ref|ZP_07262903.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae 642] Length = 282 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 18/258 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + VL+ I+ I + P +IV + L +L ++ S + LR+LS VI Sbjct: 40 VIIVLLEIIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 98 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V+A SR L P ++SIP L ++ +++ E + I I Sbjct: 99 ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + ++ I R L EV + + LS ++ + +P ++PGL + MS Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMSL 210 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR- 261 W F+VA+E+I G+G ++ + +L A++ + + L D LL R Sbjct: 211 SWMFLVAAELIAASK------GLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLARL 264 Query: 262 --PMIVWSNKFRLERTTG 277 + W + F + G Sbjct: 265 EKRFLAWRDTFNGQSREG 282 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 10/191 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + ++ +R R I+LP P Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + +W + +E+ + + GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ASKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFLWH 575 + L Sbjct: 253 LGKLSDGLLAR 263 >gi|182416893|ref|ZP_02948277.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium butyricum 5521] gi|237667160|ref|ZP_04527144.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379191|gb|EDT76692.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium butyricum 5521] gi|237655508|gb|EEP53064.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 256 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ RV+ +IA I+ + +GI IG + + Q+L P + PL Sbjct: 59 GQLMSNILASVCRVLEGFVIALILALILGIGIGLSKKLEIFTEITFQILKPIPPIAWIPL 118 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + +++ G + IL NVI G + E+ + + ++ + Sbjct: 119 AIIWFGIGESSK----IFIIVLGAFFPILLNVIDGIKNIDPKYLELEKVYEVKKIKFIKG 174 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILPG PY +TG G AW + +E+ + T G+G + + V+ Sbjct: 175 VILPGALPYIMTGIRVGLGNAWVCVVAAEMIA------ATKGVGYMLTDGRNLSRPDLVI 228 Query: 557 LGVLIMCCFVLALN 570 LG+LI+ ++ Sbjct: 229 LGMLIIGIVGKIMD 242 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 82/216 (37%), Gaps = 14/216 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +++ L L + R+L VI+L+ + S++L + Sbjct: 42 MPTPEKVIETTGEILRNGQLMSNILASVCRVLEGFVIALILALILGIGIGLSKKLEIFTE 101 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 I++ IP + ++ +++F E + IF I + + ++ + NI Sbjct: 102 ITFQILKPIPPIAWIPLAIIWFGIG--------ESSKIFIIVLGAFFPILLNVIDGIKNI 153 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 E+ + + + + + +P ++P ++ + + + W VVA+EMI Sbjct: 154 DPKYLELEKVYEVKKIKFIKGVILPGALPYIMTGIRVGLGNAWVCVVAAEMIA------A 207 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 G+G + ++ ML + V + D Sbjct: 208 TKGVGYMLTDGRNLSRPDLVILGMLIIGIVGKIMDD 243 >gi|227358548|ref|ZP_03842873.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] gi|227161259|gb|EEI46333.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] Length = 409 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 + I + +++ + + I I + A T +L++++ L+ Sbjct: 159 PVAIILFSLIAWQLSGKVMGISAF-ISLILIGAIGAWSEAMITLALVLTSLLFCLIIGLP 217 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A S R ++ P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 218 LGIWLAHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 270 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +P DL E ++SF + Q + + +P +MP ++ + ++ Sbjct: 271 -LPPIVRLTILGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 329 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ ++ + + D+L Sbjct: 330 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIILDRL 375 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 91/293 (31%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV + P+ + L + L + Q Sbjct: 115 PLDSWVTDGIDW--IVLHFRPIFQGIRVPVDLVLGGFENFLTSMPAPVAIILFSLIAWQL 172 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ I F + + AW IT+ V+ ++ I Sbjct: 173 SGKVMGISAFISLILIGAIGAWS-------------------EAMITLALVLTSLLFCLI 213 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ S ++P + PA V+ +V N+ ++ I Sbjct: 214 IGLPLGIWLAHSDRASKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 269 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 270 ALPPIVRLTILGIKQVPEDLIEAAQSFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 329 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + L+R Sbjct: 330 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGAGIVILAIILDRL 375 >gi|66045751|ref|YP_235592.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|63256458|gb|AAY37554.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas syringae pv. syringae B728a] gi|330971226|gb|EGH71292.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 282 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 22/272 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68 +R + L+ ++I ++ +++ + P +IV + L +L ++ S + Sbjct: 26 QRYRTPLKGLVVPAVIIVLLEMIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISAS 84 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LR+LS I V+A SR L P ++SIP L ++ +++ Sbjct: 85 LLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG-- 142 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E + I I + + + ++ I R L EV + + LS ++ + +P + Sbjct: 143 ------ETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAA 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGL + MS W F+VA+E+I G+G ++ + +L A++ + Sbjct: 197 LPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250 Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 + L D LL + + W + F + G Sbjct: 251 ATLGKLSDGLLASLEKRFLAWRDTFNGQSREG 282 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + ++ +R R I+LP P Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + +W + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|331014291|gb|EGH94347.1| ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 282 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 17/258 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 ++V+ I+ + + + L +L ++ S + LR+LS +I Sbjct: 39 ALIIIVLEIVVRIGWLPSYQMPAPSEIVLTLRDLADGALWKHISASLLRVLSGFLIGASL 98 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V+A SR L P ++SIP L ++ +++ KV+ + A F + Sbjct: 99 ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPV 158 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + ++ I R L EV + + S ++ + +P ++PGL + MS Sbjct: 159 Y--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 211 AWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264 Query: 261 -RPMIVWSNKFRLERTTG 277 R + W + F + Sbjct: 265 ERRFLAWRDTFNGQSRED 282 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + AW + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|330965303|gb|EGH65563.1| ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 282 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 115/272 (42%), Gaps = 22/272 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68 +R + L+ L+I ++ I++ + P +IV + L +L ++ S + Sbjct: 26 QRYRTPLKGLVVPTLIIVVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LR+LS +I V+A SR L P ++SIP L ++ +++ Sbjct: 85 LLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 KV+ + A F ++ + ++ I R L EV + + S ++ + +P + Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAA 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGL + MS W F+VA+E+I G+G ++ + +L A++ + Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250 Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 + L D LL R + W + F + Sbjct: 251 ATLGKLSDGLLAGLERRFLAWRDTFNGQSRED 282 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + AW + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|330953436|gb|EGH53696.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae Cit 7] Length = 281 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 19/259 (7%) Query: 23 LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 A ++++ +I + + P +IV + L +L ++ S + LR+LS VI Sbjct: 38 AAIIVLLEVIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGAS 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 V+A SR L P ++SIP L ++ +++ E + I Sbjct: 97 LALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + ++ I R L EV + + LS ++ + +P ++PGL + MS Sbjct: 149 IAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALPGLFTGLRSGMS 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 209 LSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAN 262 Query: 261 --RPMIVWSNKFRLERTTG 277 + + W + F + G Sbjct: 263 LEKRFLAWRDTFNGQSREG 281 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 76/189 (40%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 82 ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 141 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + ++ +R R I+LP P Sbjct: 142 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 197 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + +W + +E+ + T GLG +++ E V+ ++++ Sbjct: 198 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 251 Query: 565 FVLALNRFL 573 + L Sbjct: 252 LGKLSDGLL 260 >gi|317049220|ref|YP_004116868.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316950837|gb|ADU70312.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 281 Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 109/277 (39%), Gaps = 29/277 (10%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 R+H P + R+ L + +F + V A + +V+ D + ++ Sbjct: 16 APRRWHNPLMVPLKAISTRLRIGLGVAFFVLFVAV---WALVTFSGMVSPTFLADPITML 72 Query: 381 WLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 G +T+ RV+ ++A++I +P+GI +G + ++PF Sbjct: 73 EQGVSLFTEYNFSLDIGMTVMRVLAGFLLAALIGVPLGIMMGAYKMWEAFLEPFVSFCRY 132 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 PA+ F PL++ + L++ G+ + I+ V S+ D E A + Sbjct: 133 LPASAFVPLLILWAGIGEMQK----ILVIFIGSFFQIVLMVAVTVSSARRDLVEAAYTLG 188 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + R +++PG P G AW IV+E+ +G+G I +S Sbjct: 189 CSNRSIVRRVLIPGAAPGIAELLRLVLGWAWTYVIVAELIG------SESGIGHMIVDSQ 242 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYG 581 + +++ G++++ C L + L+ + Sbjct: 243 ALLNTGQIIFGIIVIGCIGLVSDYLFKVANRRLFAWS 279 Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 92/251 (36%), Gaps = 18/251 (7%) Query: 22 LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + FV V ++ P +++ ++ T +R+L+ +++ Sbjct: 44 FVLFVAVWALVTFSGMVSPTFLADPITMLEQGVSLFTEYNFSLDIGMTVMRVLAGFLLAA 103 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L + + L P + + +P F+ +++ E+ I Sbjct: 104 LIGVPLGIMMGAYKMWEAFLEPFVSFCRYLPASAFVPLLILWAGIG--------EMQKIL 155 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + ++ + RDL E + + S + +P + PG+ + + + Sbjct: 156 VIFIGSFFQIVLMVAVTVSSARRDLVEAAYTLGCSNRSIVRRVLIPGAAPGIAELLRLVL 215 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 W +V+ +E+I GIG I + + I++ ++ + + + D L Sbjct: 216 GWAWTYVIVAELIG------SESGIGHMIVDSQALLNTGQIIFGIIVIGCIGLVSDYLFK 269 Query: 261 ---RPMIVWSN 268 R + WSN Sbjct: 270 VANRRLFAWSN 280 >gi|225867769|ref|YP_002743717.1| glycine-betaine binding permease [Streptococcus equi subsp. zooepidemicus] gi|225701045|emb|CAW97837.1| putative glycine-betaine binding permease protein [Streptococcus equi subsp. zooepidemicus] Length = 576 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 98/235 (41%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +++ + ++ +P + + + L T +L A +IS+L Sbjct: 54 LLFMLLVTCAMFFLARKKWPLPTFTLLGLLFVYNQG-LWAELINTFTLVLVASLISVLLG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK++ + V+ P+LD+MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNKTVHQVINPMLDLMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ IP +L E S +F + QK + +P + ++ + +M Sbjct: 170 PTVRF-----TSLAIRQIPTELIEASDAFGSTPKQKLLKVELPLAKHTMMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272 Score = 82.7 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L + W + + + + T V+V +I+ + Sbjct: 51 INPLLFMLLVTCAMFFLARKKWPLPTFTLLGLLFVYNQGLWAELINTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GIW+ + I P L+ PA V+ V+ + + Sbjct: 111 LGIPLGIWMAKNKTVHQVINPMLDLMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F T + + LP + G A + Sbjct: 167 ALPPTVRFTSLAIRQIPTELIEASDAFGSTPKQKLLKVELPLAKHTMMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272 >gi|158425998|ref|YP_001527290.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332887|dbj|BAF90372.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 270 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 94/260 (36%), Gaps = 12/260 (4%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 L R+ RF P L L + S + + A+ AW + ++ T Sbjct: 2 AMLLRSWRPERFVVP--VLILAGWEMFSRSGALPPALLPAPSAVAWAWLDWVFDIDGNTQ 59 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + I+ + +RV IA+++ + +G+ IG+ I I+P Q+L P + Sbjct: 60 SYAGHWIFDVMASTWRVAAGFGIATVMAVFLGVAIGWSRFIEVTIEPTLQMLRPIPPVSW 119 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + L+ G + IL N I G + + + Sbjct: 120 IPLAIIWFGIADK----PAIFLVFLGAFFPILLNTIHGVKTVDRNLIRAGAMVGGGQRQL 175 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R+I+LP P G G AW ++ +E+ + +G+G + +S + Sbjct: 176 LRFIVLPAAMPSIFAGLRIGIGSAWMLTVTAEMVA------VKSGVGYVLWDSYYFLRYD 229 Query: 554 EVVLGVLIMCCFVLALNRFL 573 V+ + + + + Sbjct: 230 IVLAAMASIGLLGYLSDLLI 249 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 78/194 (40%), Gaps = 14/194 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +T R+ + I+ + SR + + + P L +++ IP + ++ +++F Sbjct: 70 MASTWRVAAGFGIATVMAVFLGVAIGWSRFIEVTIEPTLQMLRPIPPVSWIPLAIIWFGI 129 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 A+ AIF +F + + + + + R+L Q ++ + Sbjct: 130 --------ADKPAIFLVFLGAFFPILLNTIHGVKTVDRNLIRAGAMVGGGQRQLLRFIVL 181 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +MP + + + + W V +EM+ V G+G + + +L AM Sbjct: 182 PAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKS------GVGYVLWDSYYFLRYDIVLAAM 235 Query: 246 LTMLGVIFLYDQLL 259 ++ + +L D L+ Sbjct: 236 ASIGLLGYLSDLLI 249 >gi|261822715|ref|YP_003260821.1| glycine/betaine ABC transporter [Pectobacterium wasabiae WPP163] gi|261606728|gb|ACX89214.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium wasabiae WPP163] Length = 400 Score = 136 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q +++ + ++ I + A T +L+A+ + Sbjct: 146 LLGMPAPIAILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 205 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 206 LIGLPMGIWLARSERAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 262 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 263 A-----LPPIIRLTILGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 317 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 318 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 368 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + P Sbjct: 108 PLDSWV------THGIDWVVLHFRPIFQGIRVPVDFILGGFQQFLLGMPAPI-------- 153 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F ++G+ ++ ++ + IT+ V+ + + Sbjct: 154 ---AILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAM----ITLALVLTALFFCVL 206 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 207 IGLPMGIWLARSERAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 262 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + + LP P + G A + Sbjct: 263 ALPPIIRLTILGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 322 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 323 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 368 >gi|330875029|gb|EGH09178.1| ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 282 Score = 136 bits (344), Expect = 8e-30, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 22/272 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68 +R + L+ L+I ++ I++ + P +IV + L +L ++ S + Sbjct: 26 QRYRTPLKGLVVPALIIVVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LR+ S +I V+A SR L P ++SIP L ++ +++ Sbjct: 85 LLRVFSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 KV+ + A F ++ + ++ I R + EV + + S ++ + +P + Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKMVEVGQMYGFSRYRLTRRILLPAA 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGL + MS W F+VA+E+I G+G ++ + +L A++ + Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250 Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 + L D LL R + W + F + Sbjct: 251 ATLGKLSDGLLAGLERRFLAWRDTFNGQSRED 282 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 74/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVFSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKMVEVGQMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + AW + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|297197996|ref|ZP_06915393.1| binding-protein-dependent transport system inner membrane component [Streptomyces sviceus ATCC 29083] gi|197715001|gb|EDY59035.1| binding-protein-dependent transport system inner membrane component [Streptomyces sviceus ATCC 29083] Length = 665 Score = 136 bits (344), Expect = 8e-30, Method: Composition-based stats. Identities = 82/592 (13%), Positives = 182/592 (30%), Gaps = 56/592 (9%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 F+ +++ R P L V + G ++ + + + L + L Sbjct: 99 FVQDLISQPSGDRPVP-QIGWLGVVGLAGYVSWAVANWRVALLAVAGFTF----LGLQGL 153 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 Q + T LSA++++LLF A S R+ ++ P LD MQ++P + +L + Sbjct: 154 WQESMDTLSLTLSAVLVALLFAIPLGVWAGLSERVNRIVTPFLDFMQTMPTMVYLAPLTL 213 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F+ +A A ++ ++P E + S + Q Sbjct: 214 FFLIGG--------ASATIATVIYAAPPALRITAHAIRSVPPTTVEAAESMGATRRQSLL 265 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P S +V + ++ V + +I PG+G + A++ D+ Sbjct: 266 KVLLPMSRRTVVMGVNQTIMAALAMVTIAALI-------DAPGLGKTVVQALQSLDVGTA 318 Query: 242 LYAMLTMLGVIFLYDQL-------------LFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 A L ++ + + D++ P++ W + A + VL Sbjct: 319 FNAGLAIVVMAIVLDRVTTAASERAEAARRSGNPLLKWRRHLLV-----AGGAVAAVLVY 373 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYM----- 343 T S ++ + F + +N ++ Sbjct: 374 LSHTYLWAAEFPGDGGTGSTIAKAADNVTTWAQDHLSGLTNGFRDVITNGLLNPFQTLLT 433 Query: 344 ---LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 + +V + W++ V G T+ VV ++ ++ Sbjct: 434 DSPWWLVGAALVGIAVVLGGWRAGITTAVCVGLLVATGVWSDGMTTLASTVVATVLVMLL 493 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 + G+W+G + ++P P V+ ++ + + Sbjct: 494 GMVFGVWMGRSALVDRLVRPTLDAAQVMPPFVYLVPFLALFGATRFTAIVAAIVYAAPVA 553 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 I G P E A+S W+ + LP + Sbjct: 554 IKII----ADGVRTVPAATVEAATSSGCNTWQIITKVQLPMARSALTLATNQGLIYVLSM 609 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +V + G + +A ++ + + + L + + +R Sbjct: 610 VVVGGLVGAGALGYDV------VAGFSQGQLYGKGLAAGLAIVLLGVMFDRI 655 >gi|320324033|gb|EFW80116.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329022|gb|EFW85021.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 283 Score = 136 bits (344), Expect = 8e-30, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + VL+ I+ I + P +IV + L +L ++ S + LR+LS VI Sbjct: 40 VIIVLLEIIVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 98 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V+A SR L P ++SIP L ++ +++ E + I I Sbjct: 99 ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + ++ I R L EV + + S ++ + +P ++PGL + MS Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 211 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264 Query: 261 -RPMIVWSNKFRLERTTGI 278 + + W + F + G Sbjct: 265 EKRFLAWRDTFTGQSREGR 283 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + +W + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|302059728|ref|ZP_07251269.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 282 Score = 136 bits (343), Expect = 9e-30, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 114/272 (41%), Gaps = 22/272 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68 +R + L+ L+I ++ I++ + P +IV + L +L ++ S + Sbjct: 26 QRYRTPLKGLVVPALIIIVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LR+LS I V+A SR L P ++SIP L ++ +++ Sbjct: 85 LLRVLSGFFIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 KV+ + A F ++ + ++ I R L EV + + S ++ + +P + Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAA 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGL + MS W F+VA+E+I G+G ++ + +L A++ + Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250 Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 + L D LL + + W + F + Sbjct: 251 ATLGKLSDGLLAGLEKRFLAWRDTFNGQSRED 282 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 74/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFFIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + AW + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|213966988|ref|ZP_03395138.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301385173|ref|ZP_07233591.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302134136|ref|ZP_07260126.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928310|gb|EEB61855.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 282 Score = 136 bits (343), Expect = 9e-30, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 22/272 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68 +R + L+ L+I ++ I++ + P +IV + L +L ++ S + Sbjct: 26 QRYRTPLKGLVVPALIIIVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LR+LS +I V+A SR L P ++SIP L ++ +++ Sbjct: 85 LLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 KV+ + A F ++ + ++ I R L EV + + S ++ + +P + Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAA 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGL + MS W F+VA+E+I G+G ++ + +L A++ + Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250 Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 + L D LL + + W + F + Sbjct: 251 ATLGKLSDGLLAGLEKRFLAWRDTFNGQSRED 282 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + AW + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|167462264|ref|ZP_02327353.1| putative ABC transporter, proline/glycine betaine permease protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383435|ref|ZP_08057217.1| ABC transporter proline/glycine betaine permease-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152288|gb|EFX45112.1| ABC transporter proline/glycine betaine permease-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 575 Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 101/233 (43%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++I ++++++ + + + + ++ + T ++L++ VIS++ Sbjct: 51 FVMIAVLSLIILAVARWRMALFTFIGLLLVFNLGY-WDHTMMTLSQVLTSAVISIVLGVP 109 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L A+ + V+ P+LD MQ++P +L V +F G V G + +FAI Sbjct: 110 IGILCARRNGVQKVVTPLLDFMQTMPAFVYLLPAVSFFSL---GVVPGVIASVVFAIP-- 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + +P DL E + +F + QK L +P ++P ++ + ++ Sbjct: 165 ---PTIRLTNLGIRQVPMDLVEAADAFGSTPMQKLVKLQLPLAVPSIMAGINQTIMLSLS 221 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV S MI G+GS + A+ + + + A + ++ + + D+ Sbjct: 222 MVVISSMI-------GAQGLGSDVYRAVTQNKIGSGFEAGVAVVILAIILDRF 267 Score = 91.5 bits (226), Expect = 4e-16, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 89/236 (37%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L + V+ V I + + FT+ +L V LG +T+ +V+ +I Sbjct: 43 WLLQSVPWFVMIAVLSLIILAVARWRMALFTFIGLLLVFNLGYWDHTMMTLSQVLTSAVI 102 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 + ++ +P+GI R + + P + PA V+ + VS++ L + + Sbjct: 103 SIVLGVPIGILCARRNGVQKVVTPLLDFMQTMPAFVYL---LPAVSFFSLGVVPGVIASV 159 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 +F + G P D E A +F T + + LP P + G Sbjct: 160 VF-AIPPTIRLTNLGIRQVPMDLVEAADAFGSTPMQKLVKLQLPLAVPSIMAGINQTIML 218 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + ++S + GLG+ + + + + + + L+RF Sbjct: 219 SLSMVVISSMIG-------AQGLGSDVYRAVTQNKIGSGFEAGVAVVILAIILDRF 267 >gi|27378403|ref|NP_769932.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351551|dbj|BAC48557.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 283 Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 88/264 (33%), Gaps = 12/264 (4%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +P+ + G+ R P + S ML V + G+ Sbjct: 8 APVKPAFRLTRAFQGLERVVVPALLIAGWEAFARSGMLPPALLPAPSAVLHALGDWVFGF 67 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 TY + + + RV +AS + I G+ IG+ ++P Q+L Sbjct: 68 DETTQTYS--GHWLRDALASALRVFGGFALASALGILAGVAIGWSRLFEKTLEPTLQMLR 125 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P + PL + L+ G + +L N I G ++ + Sbjct: 126 PIPPVSWIPLAIIWFGIADK----PAIFLVFLGAFFPVLMNSIHGVKTVDHNLVRAGAMM 181 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + + I+LP P G A G AW ++ +E+ + +GLG + +S Sbjct: 182 GASQRQMLTDIVLPAALPSIFAGLRIAVGSAWMLTVTAEMVA------VKSGLGYVLWDS 235 Query: 547 TEKGSFPEVVLGVLIMCCFVLALN 570 + V+ ++ + + Sbjct: 236 YYFLRYDIVLAAMISIGLLGYLSD 259 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 85/222 (38%), Gaps = 15/222 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 + A + LR+ ++ + SR L P L +++ IP + ++ Sbjct: 76 GHWLRDALASALRVFGGFALASALGILAGVAIGWSRLFEKTLEPTLQMLRPIPPVSWIPL 135 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F A+ AIF +F + + + + + +L S Q Sbjct: 136 AIIWFGI--------ADKPAIFLVFLGAFFPVLMNSIHGVKTVDHNLVRAGAMMGASQRQ 187 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P ++P + + +++ W V +EM+ V G+G + + Sbjct: 188 MLTDIVLPAALPSIFAGLRIAVGSAWMLTVTAEMVAVKS------GLGYVLWDSYYFLRY 241 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYP 280 +L AM+++ + +L D L + ++ + +++ T Sbjct: 242 DIVLAAMISIGLLGYLSD-LGLKAIMARTLRWQQTTTVQGRA 282 >gi|83310958|ref|YP_421222.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Magnetospirillum magneticum AMB-1] gi|82945799|dbj|BAE50663.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Magnetospirillum magneticum AMB-1] Length = 294 Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 13/201 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R+ +A+I+ +P+GI +G + S + P ++L PA + P+ + Sbjct: 92 AMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYPVVEVLRPIPAIAWVPMSIML--- 148 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + + G+ + IL N + G +A + S +R++ LPG Sbjct: 149 -WPSNEESIVFITFLGSFFPILINTLHGVAAIDPALVRASRSLGAGEAALFRHVFLPGAL 207 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ TG G AW + I +E+ S G+G + E+ + ++VLG+L++ Sbjct: 208 PHIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYALVQYADIVLGMLLIG 261 Query: 564 CFVLA---LNRFLWHPLYLYG 581 LA L R L + + Sbjct: 262 VLGLASSGLIRLLGRAVMPWS 282 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 86/228 (37%), Gaps = 17/228 (7%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P ++ + ++ + + R+ + ++ + + L + P Sbjct: 69 PSPEAVLRRALVAFADPRFLEHIAMSVQRIGAGFALAAIVAVPLGIAMGRFAPLRSAVYP 128 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 ++++++ IP + ++ +++ + E + +F F + + + + I Sbjct: 129 VVEVLRPIPAIAWVPMSIMLW--------PSNEESIVFITFLGSFFPILINTLHGVAAID 180 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L SRS F ++ +P ++P + + + M W ++A+EMI Sbjct: 181 PALVRASRSLGAGEAALFRHVFLPGALPHIFTGLTVGMGVAWVSLIAAEMISG------Q 234 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWS 267 GIG + A I+ ML + + +LL R ++ WS Sbjct: 235 FGIGYFTWEAYALVQYADIVLGMLLIGVLGLASSGLIRLLGRAVMPWS 282 >gi|225869714|ref|YP_002745661.1| glycine-betaine binding permease protein [Streptococcus equi subsp. equi 4047] gi|225699118|emb|CAW92301.1| putative glycine-betaine binding permease protein [Streptococcus equi subsp. equi 4047] Length = 576 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 99/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +++ + ++ +P + + + L T +L A +IS+L Sbjct: 54 LLFMLLVTCAMFFLARKKWPLPIFTLLGLLFVYNQG-LWAELINTFTLVLVASLISVLLG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK++ + V+ P+LD+MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNKIVHQVINPMLDLMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + +L +IP +L E S +F + QK + +P + ++ + +M Sbjct: 170 PTVRF-----TNLALRHIPTELVEASDAFGSTPKQKLLKVELPLAKHTMMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272 Score = 78.4 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ +L + W + + + + T V+V +I+ + Sbjct: 51 INPLLFMLLVTCAMFFLARKKWPLPIFTLLGLLFVYNQGLWAELINTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GIW+ + I P L+ PA V+ V+ + + Sbjct: 111 LGIPLGIWMAKNKIVHQVINPMLDLMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F T + + LP + G A + Sbjct: 167 ALPPTVRFTNLALRHIPTELVEASDAFGSTPKQKLLKVELPLAKHTMMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGRGFVSGLALVILAIILDRM 272 >gi|70730546|ref|YP_260287.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344845|gb|AAY92451.1| ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 254 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 10/189 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R++V +++A +I +P+G+ +G H+ + P Q L + P+VV + Sbjct: 65 LVSLKRILVGLLLALLIGVPLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVMLMGV 124 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L+ F W IL N AG + +++ S T W R +ILPG+ Sbjct: 125 G----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQLSRSLSATRWETLRKVILPGVL 180 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + +TG + G W + E+ + GLG +I ++ ++ ++ E++ VL++ Sbjct: 181 GHVLTGVRLSIGILWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMAMVLLIG 234 Query: 564 CFVLALNRF 572 AL+ Sbjct: 235 VLGFALDAL 243 Score = 96.1 bits (238), Expect = 2e-17, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 14/196 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ + R+L ++++LL L R L P ++ I L ++ V+ Sbjct: 62 EHVLVSLKRILVGLLLALLIGVPLGLLVGSYRHLEAATTPAFQFLRMISPLSWMPVVVML 121 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + F + + +W + + + + ++SRS + W+ Sbjct: 122 MGVG--------DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQLSRSLSATRWETLRK 173 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P + ++ + +S+ W +V EM+ V G+G +I ++ Sbjct: 174 VILPGVLGHVLTGVRLSIGILWIVLVPCEMLGVSA------GLGYFILDTRDRLAYSELM 227 Query: 243 YAMLTMLGVIFLYDQL 258 +L + + F D L Sbjct: 228 AMVLLIGVLGFALDAL 243 >gi|149925532|ref|ZP_01913796.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Limnobacter sp. MED105] gi|149825649|gb|EDM84857.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Limnobacter sp. MED105] Length = 329 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 97/297 (32%), Gaps = 25/297 (8%) Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347 + + + + + + R + P L L S ++ S + Sbjct: 19 VVKASTLAPGAKEPALQAVDAPGSAPRVAARAKAEVAEKLPARELFLISAKKHSLAALMT 78 Query: 348 WFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGC-------------ITMFRVVV 392 + + VA + + V V ++ R++ Sbjct: 79 FLSIGALVAFWYVATLYRLDFYVRFNNIPTPGEVFTNMVELMQNQRFQTNIWKSVVRIMQ 138 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 +A+ + + +G+ G + + P ++L PA + P+ + + + Sbjct: 139 GFAMATALGVTLGLLCGRFAVVRGLMFPALEVLRPIPAIAWVPISIMLWPTTESS----I 194 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 + G + IL N +AG A S + +ILP P TG Sbjct: 195 IFITFIGAFFPILINTMAGVKGVDPVLLRAAKSLGANEFTMLTKVILPAALPNVFTGLAV 254 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 G AW + I +E+ S G+G + E+ +P +VLG++++ L Sbjct: 255 GMGVAWVSLIAAEMISG------QFGVGYFTWEAYSLIEYPNIVLGMIVIGVLGLLC 305 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 81/204 (39%), Gaps = 17/204 (8%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 ++ +R++ ++ L + + ++ P L++++ IP + ++ +++ + Sbjct: 131 KSVVRIMQGFAMATALGVTLGLLCGRFAVVRGLMFPALEVLRPIPAIAWVPISIMLW--- 187 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 E + IF F + + + + + L ++S + + + +P Sbjct: 188 -----PTTESSIIFITFIGAFFPILINTMAGVKGVDPVLLRAAKSLGANEFTMLTKVILP 242 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++P + + + M W ++A+EMI G+G + A + I+ M+ Sbjct: 243 AALPNVFTGLAVGMGVAWVSLIAAEMISG------QFGVGYFTWEAYSLIEYPNIVLGMI 296 Query: 247 TMLGVIFLY---DQLLFRPMIVWS 267 + + L LL R ++ W Sbjct: 297 VIGVLGLLCSGGILLLARLLMPWQ 320 >gi|319893575|ref|YP_004150450.1| ABC transporter permease protein [Staphylococcus pseudintermedius HKU10-03] gi|317163271|gb|ADV06814.1| ABC transporter permease protein [Staphylococcus pseudintermedius HKU10-03] Length = 254 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R +V +IA ++ IP+GI +G + I+P Q + + P Sbjct: 54 GEIFLHLGISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V L + + F I+FN I G N + ++A + ++ GW +R Sbjct: 114 IVLWFGIGSLPAIFIIFIAAFFP----IVFNTIKGVRTIDNHYLKIADNLNLHGWSLYRD 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 II PG F + ++G A G +W + E+ +GLG I +S + +V+ Sbjct: 170 IIFPGAFKHIMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++R + Sbjct: 224 SAIFFIGIFGFLIDRII 240 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 101/248 (40%), Gaps = 15/248 (6%) Query: 13 RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 ++ + F+L+ +I I + P + + + + + + R Sbjct: 7 KKYLRPFYTFALFLLLWQCVIWIGHYQPVLLPGPVHVAQSIGNFIITGEIFLHLGISLYR 66 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 + +I+++ L ++R L + P+L ++ I + + F V++F Sbjct: 67 FIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPFIVLWFGIG----- 121 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 L AIF IF + + + F+ + + I +++ + L GW + + P + Sbjct: 122 ---SLPAIFIIFIAAFFPIVFNTIKGVRTIDNHYLKIADNLNLHGWSLYRDIIFPGAFKH 178 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 ++ + +++ W F+V+ EMI G+G I + +L +L A+ + Sbjct: 179 IMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVLSAIFFIGIF 232 Query: 252 IFLYDQLL 259 FL D+++ Sbjct: 233 GFLIDRII 240 >gi|150399264|ref|YP_001323031.1| binding-protein-dependent transport systems inner membrane component [Methanococcus vannielii SB] gi|150011967|gb|ABR54419.1| binding-protein-dependent transport systems inner membrane component [Methanococcus vannielii SB] Length = 253 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 102/257 (39%), Gaps = 17/257 (6%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-----YVIWLGCIT 386 +++ N + + + W + + + + +VN V ++ I+ Sbjct: 1 MKILKNLAIPLLGILAWEFLAIYLNNQVILPKVESVVNILLNPGVGLLGTGNLVENTIIS 60 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + RV++ IA+++ IP+GI +G+ ++ I +LL P + PL ++ Sbjct: 61 IKRVLIGFFIAAMVAIPLGILMGYYSIVNELIDTPIELLRPIPPLAWVPLALAWFGIGES 120 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + + ++ G + IL N I+G + P E A + T + +++P P Sbjct: 121 SMH----FIIFIGAFFPILLNTISGVRSVPLIMIEAAKTLGGTTKHILKSVVIPASSPDI 176 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 +TG G AW + +E+ GLG I + VV ++++ Sbjct: 177 LTGLRVGVGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYLLSRMDVVVASMIVIGIIG 231 Query: 567 LALN---RFLWHPLYLY 580 + + RF+ + + Sbjct: 232 ILFDKGLRFIEKRYFSW 248 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 81/204 (39%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L + + R+L I+ + L + ++ +++++ IP L + Sbjct: 48 LGTGNLVENTIISIKRVLIGFFIAAMVAIPLGILMGYYSIVNELIDTPIELLRPIPPLAW 107 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + + +F F IF + + + + ++P + E +++ + Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILLNTISGVRSVPLIMIEAAKTLGGT 159 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + +P S P ++ + + + W VVA+EM+ D G+G I A Sbjct: 160 TKHILKSVVIPASSPDILTGLRVGVGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYLL 214 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ +M+ + + L+D+ L Sbjct: 215 SRMDVVVASMIVIGIIGILFDKGL 238 >gi|302876301|ref|YP_003844934.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|307687036|ref|ZP_07629482.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|302579158|gb|ADL53170.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] Length = 275 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 83/194 (42%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +I I++ RVV +I++++ I G+ +G + + P + PL Sbjct: 75 GQLIGDATISLKRVVEGYLISAVLGIFSGVIMGMNSKVDKFFFFVFSAIRQIPMLAWIPL 134 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V L+ +++I + + IL N ++G EV + ++++ W+ +R Sbjct: 135 IVLWFGIGELSK----IIVIILASFFPILLNTVSGIKRTDKGLIEVGNMYNLSRWKKFRK 190 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I P P G G +W A + +E+ + ++G+G + ++ V Sbjct: 191 IYFPSALPSIFVGLKLGLGISWMAVVGAEIIA------ASSGIGYRMNDARSLMQPEVVF 244 Query: 557 LGVLIMCCFVLALN 570 +G++++ L ++ Sbjct: 245 VGMIVIALIGLIMD 258 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 81/206 (39%), Gaps = 14/206 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L A+ + R++ +IS + + + ++ + ++ IP+L + Sbjct: 72 LISGQLIGDATISLKRVVEGYLISAVLGIFSGVIMGMNSKVDKFFFFVFSAIRQIPMLAW 131 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + V++F EL+ I I + + + + + + L EV + LS Sbjct: 132 IPLIVLWFGIG--------ELSKIIVIILASFFPILLNTVSGIKRTDKGLIEVGNMYNLS 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 W+KF + P ++P + + + + W VV +E+I GIG + A Sbjct: 184 RWKKFRKIYFPSALPSIFVGLKLGLGISWMAVVGAEIIAASS------GIGYRMNDARSL 237 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261 + M+ + + + D +L + Sbjct: 238 MQPEVVFVGMIVIALIGLIMDFVLTK 263 >gi|330891567|gb|EGH24228.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. mori str. 301020] Length = 283 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + VL+ I+ I + P +IV + L +L ++ S + LR+LS VI Sbjct: 40 VIIVLLEIIVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 98 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V+A SR L P ++SIP L ++ +++ E + I I Sbjct: 99 ALVFAARVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 150 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + ++ I R L EV + + S ++ + +P ++PGL + MS Sbjct: 151 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 210 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 211 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 264 Query: 261 -RPMIVWSNKFRLERTTGI 278 + + W + F + G Sbjct: 265 EKRFLAWRDTFTGQSREGR 283 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 74/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + +G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFVIGASLALVFAARVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + +W + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|332286150|ref|YP_004418061.1| substrate-binding region of ABC-type glycine betaine transport system [Pusillimonas sp. T7-7] gi|330430103|gb|AEC21437.1| substrate-binding region of ABC-type glycine betaine transport system [Pusillimonas sp. T7-7] Length = 654 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 97/232 (41%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 + + ++ L V + + L +T +L + ++S++ Sbjct: 419 VFLLLVAALSWHATRKPVATVLYVACLYLIGAVGLWDKLIQTFALVLVSTLVSIVLGVPI 478 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 +AA+SR L VL P+LD+MQ++P +L ++ F ++ A+FA Sbjct: 479 GIIAARSRLLRRVLTPVLDVMQTLPSFVYLIPVLMLFGLG--------KVPALFATIIYA 530 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 V + L + RD+ E +++F ++ WQ + +P + P ++ + + Sbjct: 531 VPPLIRLTILGLRQVDRDVMEAAQAFGVTRWQMLTRVTLPLARPSIMAGINQTTMMALAM 590 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + I+ D+ L A + ++ + + D++ Sbjct: 591 VVVASMI-------GARGLGEDVLAGIQTLDVGRGLQAGVAIVILAIVIDRI 635 Score = 95.8 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 92/279 (32%), Gaps = 18/279 (6%) Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 + W+ + ++ + + + G F F+ V ++ V + + Sbjct: 369 FPDWSIAALVNQQLMGVVKNYGGF-FRQASGFMLTTVLLPVERLMQAVPPWVFLLLVAAL 427 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +W + V Y LY+I + T V+V +++ ++ +P+GI Sbjct: 428 SWHATRKPVATVLYVACLYLIGAVGLWDKLIQTFALVLVSTLVSIVLGVPIGIIAARSRL 487 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + + P ++ P+ V+ V+ + I ++ I G Sbjct: 488 LRRVLTPVLDVMQTLPSFVYLIPVLMLFGLG----KVPALFATIIYAVPPLIRLTILGLR 543 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 D E A +F +T W+ + LP P + G A +V+ + Sbjct: 544 QVDRDVMEAAQAFGVTRWQMLTRVTLPLARPSIMAGINQTTMMALAMVVVASMIG----- 598 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + + + + + ++R Sbjct: 599 --ARGLGEDVLAGIQTLDVGRGLQAGVAIVILAIVIDRI 635 >gi|270261496|ref|ZP_06189769.1| transporter [Serratia odorifera 4Rx13] gi|270044980|gb|EFA18071.1| transporter [Serratia odorifera 4Rx13] Length = 287 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 111/291 (38%), Gaps = 28/291 (9%) Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY--IVN 369 V +L R + P + R ++ + V W + +V+ Sbjct: 7 PVAELEREPAALPPAKPHWHNPMMVPLRPVAGRLRWFLGLAFFVLFVALWGLATFTGLVS 66 Query: 370 HFTYQDVLYVIWLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 D L ++ G +T+FRV+ ++A+ I +P+GI +G + + Sbjct: 67 PTFLADPLTMLREGVLLFTEYDFSLDIGMTVFRVLSGFLLAAAIAVPLGIMMGSYKLVEA 126 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 ++PF PA+ F PL++ + L++ G+ + I+ V A Sbjct: 127 FLEPFVSFCRYLPASAFVPLLILWAGIGEMQK----ILVIFIGSFFQIVLMVAVTVGAAR 182 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D E A + + R +++PG P G AW IV+E+ + Sbjct: 183 RDLVEAAYTLGASNRSVVRRVLIPGAAPEIAELLRLVLGWAWTYVIVAELIG------SS 236 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGTRC 584 +G+G I +S + +++ G++++ C L + L+++ + Sbjct: 237 SGIGHMIVDSQALLNTGQIIFGIIVIGCIGLLSDLLFKAANKRLFIWSSLR 287 Score = 96.1 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 89/255 (34%), Gaps = 15/255 (5%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQY 64 + P R F + + FV + G+ L P ++ + + Sbjct: 33 LRPVAGRLRWFLGLAFFVLFVALWGLATFTGLVSPTFLADPLTMLREGVLLFTEYDFSLD 92 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T R+LS +++ + + + L P + + +P F+ +++ Sbjct: 93 IGMTVFRVLSGFLLAAAIAVPLGIMMGSYKLVEAFLEPFVSFCRYLPASAFVPLLILWAG 152 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E+ I IF + + + ++ RDL E + + S + Sbjct: 153 IG--------EMQKILVIFIGSFFQIVLMVAVTVGAARRDLVEAAYTLGASNRSVVRRVL 204 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P + + + + W +V+ +E+I GIG I + + I++ Sbjct: 205 IPGAAPEIAELLRLVLGWAWTYVIVAELIGSSS------GIGHMIVDSQALLNTGQIIFG 258 Query: 245 MLTMLGVIFLYDQLL 259 ++ + + L D L Sbjct: 259 IIVIGCIGLLSDLLF 273 >gi|163740809|ref|ZP_02148202.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10] gi|161385800|gb|EDQ10176.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10] Length = 650 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 79/540 (14%), Positives = 167/540 (30%), Gaps = 56/540 (10%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L V A T +L A+ I + A + +L P+LD+MQ+IPI + Sbjct: 130 LAVFGQWDSAMVTLASVLIAVPIGAGGGLLTGIWAYRHPVGERILSPLLDLMQTIPIFAY 189 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L + F ++A+ A M +L ++ ++ + R + Sbjct: 190 LVPILFMFG--------FGPVSALVATIIYATPPMIRVTILALKSVDPEILDFGRMAGTT 241 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 Q W + VP + L+ + + V+ + MI G G+G + A++ Sbjct: 242 PRQLMWRVLVPSASQSLMVGVNQVIMLTLNMVIIASMIGAG-------GLGFDVLAALRR 294 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL 295 D+ A A + ++ + D+L ++ + SW ++T + Sbjct: 295 LDIGAGFEAGIAIVVLAIAVDRLS----QAFAERMG---QVHHIAPGSWA-TRHKRTVLV 346 Query: 296 RFIGYSSWNFFSPLSNNVKKLCR----------------------TLGVIRFHFPENFLQ 333 + +W ++ ++ F F+ Sbjct: 347 LSLLIITWGLGRFSPLLLQYPISQTITTGDFWSETVKYLNVNYFDAFEAVKVFFLHWFML 406 Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 + + W+ + T + +T++ Sbjct: 407 PIKKTLLGIPWPWAVAMLTLVGWRAGGWRLALMCGSMSTLIAFSGLWAKAMVTVYLCGAS 466 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 +I+A++I +P+G+ I F L P+ V+ VV + + Sbjct: 467 VILATLIGVPLGVLAALNKRAGVAIGLFIDTLQTLPSFVYLIPVVMLFRVGDFTAMIAIV 526 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 L + Y G + + E T W+ R + LP P + G Sbjct: 527 LYALAPAVRY----AAHGMRSVSGELIEAGLVSGCTRWQLLRMVRLPMALPEILLGINQT 582 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 A + +++ + LG + + K ++ L + + +R + Sbjct: 583 IMLALSMLVITALVGTRD-------LGQEVYIALTKADTGRGLVAGLAIAFIAIIADRLV 635 >gi|296127569|ref|YP_003634821.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira murdochii DSM 12563] gi|296019385|gb|ADG72622.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] Length = 275 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 88/232 (37%), Gaps = 11/232 (4%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV-LYVIWLGCITMFRVVVLIIIASIIW 401 ++ + W+ + + + F V Y + IT+ RV IIA II Sbjct: 37 VIMVVWYFLAKKIDNNLLLPDFLLTCKEFFLSWVDPYTVQNLLITLERVFRGFIIACIIG 96 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+G+ +G+ I + P + P + PL + L+ Sbjct: 97 LPLGLIMGYSKPILLAVSPIINSIRQVPIMAWIPLAIVWFGLGDG----PTIFLITMSAI 152 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + ++ N I G ++ A S IILPG P ++TG A G W + Sbjct: 153 FPLIINTIDGVRGIDPNYINAARSMGARNIDIMFDIILPGALPSFLTGCRLALGLGWMSV 212 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 I +E + + G G + E+ ++ P++ +++ +++R L Sbjct: 213 ICAEFIA------TSKGFGFILVEAQQRLETPKLYALMIVSAIIGFSMDRVL 258 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 76/195 (38%), Gaps = 14/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T R+ +I+ + + S+ + + + PI++ ++ +PI+ ++ +V+F Sbjct: 78 LLITLERVFRGFIIACIIGLPLGLIMGYSKPILLAVSPIINSIRQVPIMAWIPLAIVWFG 137 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 IF I S ++ + + + I + +RS + + Sbjct: 138 LGDGP--------TIFLITMSAIFPLIINTIDGVRGIDPNYINAARSMGARNIDIMFDII 189 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + +++ GW V+ +E I G G + A + + + Sbjct: 190 LPGALPSFLTGCRLALGLGWMSVICAEFIATSK------GFGFILVEAQQRLETPKLYAL 243 Query: 245 MLTMLGVIFLYDQLL 259 M+ + F D++L Sbjct: 244 MIVSAIIGFSMDRVL 258 >gi|218511038|ref|ZP_03508916.1| binding-protein dependent transport system inner membrane protein [Rhizobium etli Brasil 5] Length = 264 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 10/210 (4%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 + +I ++ RV IA+++ I G+ IG + + + Sbjct: 48 VDVFAAALGLLQSPKLIAHVSSSLERVFAGYAIAAVVGIACGLIIGRSRKVGDFLLAPLE 107 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 LL PA + PL V L+ + + G + IL N + G A Sbjct: 108 LLRPIPAVAWIPLAVLMFPSSELS----MIFITFTGALFPILLNTVHGVEGVDPRLIAAA 163 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 S T +ILPG P VTG G +W + +E+ S G+G Y Sbjct: 164 KSLGSTRRAMLFEVILPGAAPSIVTGLAIGMGTSWFCLVTAEMISG------QFGIGYYT 217 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 E+ ++PE+++G+ ++ + + L Sbjct: 218 WEAYTLQNYPEIIVGMAVIGVLGIGSSTLL 247 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 97/241 (40%), Gaps = 17/241 (7%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ L Q P D+ L L + S + R+ + I+ + + Sbjct: 34 LDLGLVTFQNVPSPVDVFAAALGLLQSPKLIAHVSSSLERVFAGYAIAAVVGIACGLIIG 93 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +SR++G L+ L++++ IP + ++ V+ F +EL+ IF FT ++ + Sbjct: 94 RSRKVGDFLLAPLELLRPIPAVAWIPLAVLMF--------PSSELSMIFITFTGALFPIL 145 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L ++S + + + +P + P +V + + M WF +V +E Sbjct: 146 LNTVHGVEGVDPRLIAAAKSLGSTRRAMLFEVILPGAAPSIVTGLAIGMGTSWFCLVTAE 205 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVWSN 268 MI GIG Y A Q+ I+ M + + + + +I W Sbjct: 206 MISG------QFGIGYYTWEAYTLQNYPEIIVGMAVIGVLGIGSSTLLRAVGNALIPWQK 259 Query: 269 K 269 K Sbjct: 260 K 260 >gi|150401416|ref|YP_001325182.1| binding-protein-dependent transport systems inner membrane component [Methanococcus aeolicus Nankai-3] gi|150014119|gb|ABR56570.1| binding-protein-dependent transport systems inner membrane component [Methanococcus aeolicus Nankai-3] Length = 254 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 86/232 (37%), Gaps = 9/232 (3%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401 + + W + + S+ + ++ I++ RVV +IA ++ Sbjct: 17 WEIIAIWLNNPIILPRVESVLSVLLAPQQPILGTGINLMDNTIISIKRVVSGFLIAGLVA 76 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+GI +G+ I +LL P + PL ++ + + ++ G Sbjct: 77 VPIGISMGYFSTIRDFFDAGIELLRPIPPLAWVPLALAWFGIGETS----MLFIIFIGAF 132 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + IL N IAG P + A + II+P P +TG G AW Sbjct: 133 FPILINTIAGVKGVPTILIDSAQTLGAKQKDILLKIIIPASSPSILTGLRIGAGIAWMCV 192 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ GLG I + VV ++I+ L L++ L Sbjct: 193 VAAEMLPGSD-----AGLGYLIMYAYMLSRMDIVVASMIIIGLIGLTLDKVL 239 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 80/212 (37%), Gaps = 13/212 (6%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 + PI +L + R++S +I+ L + ++++ Sbjct: 41 LAPQQPILGTGINLMDNTIISIKRVVSGFLIAGLVAVPIGISMGYFSTIRDFFDAGIELL 100 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + IP L ++ + +F E + +F IF + + + + +P L + Sbjct: 101 RPIPPLAWVPLALAWFGIG--------ETSMLFIIFIGAFFPILINTIAGVKGVPTILID 152 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 +++ + +P S P ++ + + W VVA+EM+ D G+G Sbjct: 153 SAQTLGAKQKDILLKIIIPASSPSILTGLRIGAGIAWMCVVAAEMLPGSDA-----GLGY 207 Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 I A + ++ +M+ + + D++L Sbjct: 208 LIMYAYMLSRMDIVVASMIIIGLIGLTLDKVL 239 >gi|315924093|ref|ZP_07920319.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622495|gb|EFV02450.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 576 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 99/240 (41%), Gaps = 18/240 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL---DVHSLPQYASRTTLRMLSAMVI 78 L+ V+ I+ + + + + V I L L + T + A ++ Sbjct: 48 LVFLPPVLVILGLAVAAYFVANRKKGLPIFVLIGLLFVYNQGLWEDMMNTVTLVFMAALL 107 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 S++ L AK R +V+ PILD MQ++P +L V +F G V G + Sbjct: 108 SVVIGIPLGILMAKKDRAQVVIQPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASI 164 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFA+ + + + IPR+L E S +F + QK + + +P + ++ + Sbjct: 165 IFALPPTVRF-----TNLGIREIPRELIEASDAFGSTSSQKLFKIELPLARNTIMAGINQ 219 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 ++ VV + MI PG+G + A++ + + + ++ + + D+ Sbjct: 220 TIMLALSMVVTASMI-------GAPGLGRGVLSALQRAQVGNGFVSGMALVVLAIIIDRF 272 Score = 83.8 bits (206), Expect = 8e-14, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 91/280 (32%), Gaps = 24/280 (8%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 + + ++ + FFS + K + P + L ++ + + Sbjct: 17 HVVSWMTKAWAGFFSAVQWGGKGAMDAITRFLVFLPPVLVILGLAVAAYFVANRKKGLPI 76 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 + + ++ N ++D++ T+ V + +++ +I IP+GI + + Sbjct: 77 FVLI------GLLFVYNQGLWEDMMN-------TVTLVFMAALLSVVIGIPLGILMAKKD 123 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 IQP + PA V+ V+ + + + G Sbjct: 124 RAQVVIQPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASIIF----ALPPTVRFTNLGI 179 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P + E + +F T + I LP + G A + + + + Sbjct: 180 REIPRELIEASDAFGSTSSQKLFKIELPLARNTIMAGINQTIMLALSMVVTASMIG---- 235 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 236 ---APGLGRGVLSALQRAQVGNGFVSGMALVVLAIIIDRF 272 >gi|28869973|ref|NP_792592.1| ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853218|gb|AAO56287.1| ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 282 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 22/272 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68 +R + L+ L+I ++ I++ + P +IV + L +L ++ S + Sbjct: 26 QRYRTPLKGLVVPALIIIVLEIVVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISAS 84 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LR+LS +I V+A SR L P ++SIP L ++ +++ Sbjct: 85 LLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGET 144 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 KV+ + A F ++ + ++ I R L EV + + S ++ + +P + Sbjct: 145 SKVVLIAIGAFFPVY--------LNGVAAIRGIDRKLVEVGQMYGFSRYRLTQRILLPAA 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGL + MS W F+VA+E+I G+G ++ + +L A++ + Sbjct: 197 LPGLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVL 250 Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 + L D LL + + W + F + Sbjct: 251 ATLGKLSDGLLAGLEKRFLAWRDTFNGQSRED 282 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 83 ASLLRVLSGFLIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R + I+LP P Sbjct: 143 ETSK----VVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTQRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + AW + +E+ + T GLG +++ E V+ ++++ Sbjct: 199 GLFTGLRSGMSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|91780784|ref|YP_555991.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693444|gb|ABE36641.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 273 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 95/273 (34%), Gaps = 14/273 (5%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + L L + S + + + IAW + + T Sbjct: 3 SRFSSRFYRRIERGIVPVLLLAGWEAFSRSGILPAALLPAPSQVLIAWADWIFATDGNTQ 62 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + ++ + RV IA+++ + +G+ IG+ + S ++P Q L P + Sbjct: 63 TYSGHWLFDIAASSGRVFAGFGIATVLGVAIGMAIGWSRAVESLVEPTLQTLRPVPPVSW 122 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + N L+ G+ + +L + I G D + + Sbjct: 123 IPLAIIWFGIA----NKPAIFLVFMGSFFPVLLSTIHGVKTCDRDLLRAGAMTGGSPQML 178 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R+I+ P P +G A G AW ++ +E+ + +G+G + +S + Sbjct: 179 LRHIVFPAALPSIFSGLRIAIGSAWMLTVTAEMVA------VKSGVGYVLWDSYYFLRYD 232 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 V+ ++ + A + + R LR Sbjct: 233 IVIASMVSIGLLGFASDYVIKR----IAARILR 261 Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 77/196 (39%), Gaps = 14/196 (7%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + ++ R+ + I+ + SR + ++ P L ++ +P + ++ +++F Sbjct: 73 AASSGRVFAGFGIATVLGVAIGMAIGWSRAVESLVEPTLQTLRPVPPVSWIPLAIIWFGI 132 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 A AIF +F + + S + RDL S ++ Sbjct: 133 --------ANKPAIFLVFMGSFFPVLLSTIHGVKTCDRDLLRAGAMTGGSPQMLLRHIVF 184 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + + +++ W V +EM+ V G+G + + ++ +M Sbjct: 185 PAALPSIFSGLRIAIGSAWMLTVTAEMVAVKS------GVGYVLWDSYYFLRYDIVIASM 238 Query: 246 LTMLGVIFLYDQLLFR 261 +++ + F D ++ R Sbjct: 239 VSIGLLGFASDYVIKR 254 >gi|305662628|ref|YP_003858916.1| binding-protein-dependent transport systems inner membrane component [Ignisphaera aggregans DSM 17230] gi|304377197|gb|ADM27036.1| binding-protein-dependent transport systems inner membrane component [Ignisphaera aggregans DSM 17230] Length = 224 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 115/208 (55%), Gaps = 1/208 (0%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + LR+ SA ++S+ V A+S+ L ++L PI+D++QSIP+LGF Sbjct: 5 ELIVDLLYSLLRLFSAYILSISVALVIGISMARSKVLEVILYPIIDVLQSIPVLGFFPAV 64 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ +N++P IG E+A+I IFT QVWN+ +Y ++ ++P D +S + L+ + Sbjct: 65 LLFLVNIFPPP-IGVEMASIILIFTGQVWNLILGVYSAIKSLPSDFILLSEVYSLNTASR 123 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P ++ + N ++S +GG FF+ A E+I G+T L GIG+ I + D + Sbjct: 124 ILKIYIPAALFAIASNSVVSWAGGLFFLTACEIISFGNTEYRLRGIGTTIIELASKGDYI 183 Query: 240 AILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + A++ +L + L+ P+ + Sbjct: 184 DMYIAIMLLLAISIFLYIFLWNPLANIA 211 Score = 94.2 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 88/210 (41%), Gaps = 3/210 (1%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ +I ++ R+ I++ + + +GI + + + P +L + P FFP Sbjct: 3 IIELIVDLLYSLLRLFSAYILSISVALVIGISMARSKVLEVILYPIIDVLQSIPVLGFFP 62 Query: 436 LVVSCVSYYHLNP---NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 V+ + P + +L+ G W ++ V + + P+DF ++ + + Sbjct: 63 AVLLFLVNIFPPPIGVEMASIILIFTGQVWNLILGVYSAIKSLPSDFILLSEVYSLNTAS 122 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 I +P + ++ + G E+ S+G+ R G+G I E KG + Sbjct: 123 RILKIYIPAALFAIASNSVVSWAGGLFFLTACEIISFGNTEYRLRGIGTTIIELASKGDY 182 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYGT 582 ++ + ++++ + L FLW+PL Sbjct: 183 IDMYIAIMLLLAISIFLYIFLWNPLANIAA 212 >gi|152986057|ref|YP_001346556.1| taurine ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150961215|gb|ABR83240.1| probable permease of ABC taurine transporter [Pseudomonas aeruginosa PA7] Length = 272 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 97/270 (35%), Gaps = 24/270 (8%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382 P +R + + ++ A W + ++ + L +W Sbjct: 13 PVPRKRSLPGDRRRWAAGASVLALALLWWAATHFGWVDVLFLPAPEQLFEALQRLWQEGY 72 Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ + A + IP+G+ +G P + + P + P + Sbjct: 73 LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 132 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V L+ LL+ +L AG + + W+ Sbjct: 133 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 188 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 RY+ILP P +TG A G W+ + +E+ + GLG + + + + Sbjct: 189 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 242 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLYG 581 VV+G+L++ LA R++ +G Sbjct: 243 VVVGILLIAAVALAFELGLRWVQRRFAAWG 272 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 75 ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 134 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F EL+ + I+ + + + + + R + R S WQ Sbjct: 135 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 186 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 Y+ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 187 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 240 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + V ++ + + R W Sbjct: 241 DVVVVGILLIAAVALAFELGLRWVQRRFAAW 271 >gi|13022190|gb|AAK11681.1|AF342826_2 putative ABC transporter permease [Enterobacter cloacae] Length = 268 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 67/188 (35%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M RV +A ++ IP G+ IG + + P QLL P + PL + Sbjct: 75 SMSRVYGAFALAVLLAIPTGLLIGKNALVRRLVDPTLQLLRPVPVTAWLPLSMIFFGVGP 134 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ G + I N G + E A+ G +R ++LP P Sbjct: 135 N----AAIFLVCLGAFFPIAINTAFGVKSVEPRLFEAAAMLGCKGPSMFRQVVLPAAMPS 190 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G AW +V E+ GLGA I + V+ G++++ Sbjct: 191 IFNGLRMGHAIAWFLIVVGEM------TGVPEGLGAAIMDGRMLSRTDVVIAGMVVIGLT 244 Query: 566 VLALNRFL 573 +R L Sbjct: 245 GFITDRLL 252 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 87/213 (40%), Gaps = 17/213 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L + ++ R+ A +++L L K+ + ++ P L +++ +P+ +L Sbjct: 66 GTLYIHWIKSMSRVYGAFALAVLLAIPTGLLIGKNALVRRLVDPTLQLLRPVPVTAWLPL 125 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++++F AAIF + + + + + ++ L E + G Sbjct: 126 SMIFFGVG--------PNAAIFLVCLGAFFPIAINTAFGVKSVEPRLFEAAAMLGCKGPS 177 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P +MP + + M + WF +V EM V + G+G+ I Sbjct: 178 MFRQVVLPAAMPSIFNGLRMGHAIAWFLIVVGEMTGVPE------GLGAAIMDGRMLSRT 231 Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268 ++ M+ + F+ D+LL ++ WS Sbjct: 232 DVVIAGMVVIGLTGFITDRLLVTLNNRLLKWSP 264 >gi|188583387|ref|YP_001926832.1| ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179346885|gb|ACB82297.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium populi BJ001] Length = 283 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 97/271 (35%), Gaps = 10/271 (3%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + S+ +P+ + R + +++ + + + V Sbjct: 1 MSASAIETGAPIRAPRGRAVRLPRTLPLGRLALRGLALGLSLLAWHVAARYRLDLGLVTF 60 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + + ++ RV+ + A ++ + +G+ IG Sbjct: 61 RNVPTPAAAAQAAWALLHAPALPTHLGASLARVLSGFLAALVVGVALGLAIGRSRFARDL 120 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P ++L PA + PL + + + ++ + G + IL N + G + Sbjct: 121 LWPPLEVLRPIPAVAWIPLAILMFP----SSEVSMAFITFTGALFPILLNTVHGVESVHP 176 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 A S R +ILPG P VTGA G AW + +E+ S + Sbjct: 177 RLVAAARSLGAGDAAILREVILPGATPSIVTGAAIGMGTAWFCLVTAEMISGQY------ 230 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G+G + ES ++ ++V+G+L++ + Sbjct: 231 GIGYFTWESYTLQNYDDIVVGMLLIGVLGMG 261 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 14/222 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ L + P L +LP + + R+LS + +L+ Sbjct: 53 LDLGLVTFRNVPTPAAAAQAAWALLHAPALPTHLGASLARVLSGFLAALVVGVALGLAIG 112 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +SR +L P L++++ IP + ++ ++ F +E++ F FT ++ + Sbjct: 113 RSRFARDLLWPPLEVLRPIPAVAWIPLAILMF--------PSSEVSMAFITFTGALFPIL 164 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ L +RS + +P + P +V + M WF +V +E Sbjct: 165 LNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGATPSIVTGAAIGMGTAWFCLVTAE 224 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 MI GIG + + Q+ I+ ML + + Sbjct: 225 MISG------QYGIGYFTWESYTLQNYDDIVVGMLLIGVLGM 260 >gi|332971534|gb|EGK10484.1| ABC superfamily ATP binding cassette transporter, membrane protein [Kingella kingae ATCC 23330] Length = 266 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV V ++ A +I +P+G +G + + P Q L + P+VV Sbjct: 77 GASLQRVGVGLLAALMIGVPIGFALGLSRKVEQVVSPSFQFLRMISPLSWMPVVVMLFGI 136 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+ F W I+ N ++G + E+ S T I+LP + Sbjct: 137 GDA----PIYFLLAFAAVWSIILNTVSGVKNINPQWLELGRSLSATKSEMLFKIMLPAVV 192 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G W + E+ GLG +I ++ ++ ++ E++ ++++ Sbjct: 193 GDILNGLRLAIGIVWVVLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAIVLIG 246 Query: 564 CFVLALN 570 AL+ Sbjct: 247 VIGWALD 253 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 86/229 (37%), Gaps = 14/229 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + +I + P + + L +L + + R+ ++ +L+ Sbjct: 39 IGSLILAHSMPLANMLAPAAAIGSLKKLLLDGNLWAHIGASLQRVGVGLLAALMIGVPIG 98 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 SR++ V+ P ++ I L ++ V+ F + F + + V Sbjct: 99 FALGLSRKVEQVVSPSFQFLRMISPLSWMPVVVMLFGIG--------DAPIYFLLAFAAV 150 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W++ + + NI E+ RS + + + + +P + ++ + +++ W + Sbjct: 151 WSIILNTVSGVKNINPQWLELGRSLSATKSEMLFKIMLPAVVGDILNGLRLAIGIVWVVL 210 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 V EM+ V + G+G +I ++ A++ + + + D Sbjct: 211 VPCEMLGVNE------GLGYFILDTRDRLAYSELMAAIVLIGVIGWALD 253 >gi|238063035|ref|ZP_04607744.1| ABC nitrate transporter permease component [Micromonospora sp. ATCC 39149] gi|237884846|gb|EEP73674.1| ABC nitrate transporter permease component [Micromonospora sp. ATCC 39149] Length = 264 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RV + +A+++ I +G+ +G + S + P Q+L +FP+ + + Sbjct: 71 YISLRRVFLGFGLAALVGITLGLIMGAVRPVWSALNPLVQVLRPVSPLAWFPIWLYIIE- 129 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 P +++ W L N AGA A P D + VA F + ++++P Sbjct: 130 ---EPAQSAIIVIFITALWPTLINTAAGAGAIPRDQRNVALVFKFRPLAYLWHVLIPNAL 186 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG + G W + E+ +G+G ++ S +VV ++++ Sbjct: 187 PSIITGLRLSMGIGWMVIVAVEMLQG------NSGIGYFVWNSYNALELDKVVAAIVLIG 240 Query: 564 CFVLALNRFL 573 L L+ L Sbjct: 241 VIGLVLDAIL 250 Score = 121 bits (304), Expect = 4e-25, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 93/250 (37%), Gaps = 22/250 (8%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HSLPQYASRTTL 70 ++ ++ + + + G P D + L + + + Sbjct: 16 LWAVVGLAVFVALWQFASRGSATVPNPLDSARTLGDLLSRPFFNTTNDKGIGLHLYISLR 75 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ ++ L + R + L P++ +++ + L + + Sbjct: 76 RVFLGFGLAALVGITLGLIMGAVRPVWSALNPLVQVLRPVSPLAWFPIWLYI-------- 127 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + +AI IF + +W + IPRD V+ F+ W++ +P ++P Sbjct: 128 IEEPAQSAIIVIFITALWPTLINTAAGAGAIPRDQRNVALVFKFRPLAYLWHVLIPNALP 187 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ + +SM GW +VA EM+ GIG ++ + +L ++ A++ + Sbjct: 188 SIITGLRLSMGIGWMVIVAVEMLQGNS------GIGYFVWNSYNALELDKVVAAIVLIGV 241 Query: 251 VIFLYDQLLF 260 + + D +L Sbjct: 242 IGLVLDAILL 251 >gi|322508395|gb|ADX03849.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii 1656-2] gi|323518017|gb|ADX92398.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii TCDC-AB0715] Length = 251 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 98/244 (40%), Gaps = 20/244 (8%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC----------ITMFR 389 +++ FW + G+A N T DV++ +W ++FR Sbjct: 2 IAFTSIAFWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFR 61 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 VVV ++A++I + +G+ G +++ + P ++L PA + PL + + Sbjct: 62 VVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPSSEAS-- 119 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + + G + IL N + G A A S + +I+PG P +TG Sbjct: 120 --MIFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITG 177 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 G W + +E+ S G+G + ES ++ +V+G++++ + Sbjct: 178 LSIGMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFS 231 Query: 570 NRFL 573 + + Sbjct: 232 STLV 235 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 97/241 (40%), Gaps = 14/241 (5%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 + ++ L +N+ P D++ + + + ++ + R++ V+ Sbjct: 9 FWIVIWQGLAQFKVNLGFVNFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVL 68 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L LA + ++L L+P L++++ IP + ++ ++ F +E + Sbjct: 69 AALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASM 120 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF F ++ + + + + L ++S S + +P ++P ++ + + Sbjct: 121 IFITFIGALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIHEVIIPGALPNIITGLSI 180 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M WF +V +EMI GIG + + Q+ I+ M+ + + L Sbjct: 181 GMGTCWFCLVTAEMISG------QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTL 234 Query: 259 L 259 + Sbjct: 235 V 235 >gi|260425684|ref|ZP_05779664.1| taurine ABC transporter, permease protein [Citreicella sp. SE45] gi|260423624|gb|EEX16874.1| taurine ABC transporter, permease protein [Citreicella sp. SE45] Length = 421 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV+ ++I IP+G +G P + + P PLV+ Sbjct: 230 SLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L +L+ W + +G S A S + W+ R++I+P P Sbjct: 290 LGK----IILLFLAALWIMAIAARSGVSGVSISKVHAAYSLGASKWQIMRHVIVPNSLPD 345 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGA A G W + +E+ + G G I +++ V++G++++ Sbjct: 346 IFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASKFQLTDIVIMGIILIGVI 399 Query: 566 VLALNRFL 573 ++ + Sbjct: 400 GFGIDILM 407 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 17/214 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L ++ + R+++ L S PI++ M+ +P L + Sbjct: 221 STLWEHLGWSLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPL 280 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++ EL I +F + +W M + + + + S S WQ Sbjct: 281 VIIWAGIG--------ELGKIILLFLAALWIMAIAARSGVSGVSISKVHAAYSLGASKWQ 332 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP S+P + ++M W VVA+E++ G G I +A K Q Sbjct: 333 IMRHVIVPNSLPDIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASKFQLT 386 Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 ++ ++ + + F D L+ + ++ W + Sbjct: 387 DIVIMGIILIGVIGFGIDILMRLAEKALVPWKGR 420 >gi|220914798|ref|YP_002490106.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219952549|gb|ACL62939.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 283 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 85/263 (32%), Gaps = 12/263 (4%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 P + + R P L S L V + +G Sbjct: 9 PAVRHAAAWRIWSKLERVVVPVLILAGWEAFSRSGYLPQSLLPPPSAVLHALGDWVLGVD 68 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + Y + + +RV+ +IA + I +G IG+ ++P Q+L Sbjct: 69 GSTQDYSGTW--LRHALSSTWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRP 126 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P + PL + L+ G + L N I G + + Sbjct: 127 VPPVSWIPLAIIWFGIADK----PAIFLVFLGAFFPTLMNTIHGVKTIDRNLIRAGAMMG 182 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 TG + +I++P P G A G AW ++ +E+ + +G+G + +S Sbjct: 183 ATGRQLLMHIVVPAALPSIFAGLRIAIGSAWMLTVTAEMVA------VKSGVGYVLWDSY 236 Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570 + V+ ++ + + Sbjct: 237 YFLRYDMVIASMVSIGLLGYLSD 259 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 85/198 (42%), Gaps = 14/198 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 ++A +T R+L+ VI+ L + T SR L P L +++ +P + ++ ++ Sbjct: 79 LRHALSSTWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRPVPPVSWIPLAII 138 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F A+ AIF +F + + + I R+L +G Q Sbjct: 139 WFGI--------ADKPAIFLVFLGAFFPTLMNTIHGVKTIDRNLIRAGAMMGATGRQLLM 190 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 ++ VP ++P + + +++ W V +EM+ V G+G + + + Sbjct: 191 HIVVPAALPSIFAGLRIAIGSAWMLTVTAEMVAVKS------GVGYVLWDSYYFLRYDMV 244 Query: 242 LYAMLTMLGVIFLYDQLL 259 + +M+++ + +L D + Sbjct: 245 IASMVSIGLLGYLSDFAI 262 >gi|86748598|ref|YP_485094.1| binding-protein dependent transport system inner membrane protein [Rhodopseudomonas palustris HaA2] gi|86571626|gb|ABD06183.1| Binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris HaA2] Length = 306 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 96/288 (33%), Gaps = 23/288 (7%) Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG 358 + + P + R + +L+L + ++ + Sbjct: 17 AAAFRVGWLPSAATAPTAPRRGAASPGTYIRRWLKLNRGGLRALLIGAVALVLFLFAWHL 76 Query: 359 IAWQSIGYIVNHFTYQDVLYV-------------IWLGCITMFRVVVLIIIASIIWIPVG 405 + + + V V ++ R+++ +A++I +P+G Sbjct: 77 LTANRVVFFVRFTNVPSPAAVYDSLTRAMHDSKFFMHVLLSCRRILIGFSLAALIAVPLG 136 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 + +G I + P +++L PA + P+ + + + G+ + IL Sbjct: 137 MVMGRFKLIHEALFPISEVLRPIPAIAWVPMAIML----WPTNEQSIVFITFLGSFFPIL 192 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N + G + + +R + P P+ TG G AW + I +E Sbjct: 193 VNTLHGMKLVDPVLVRASQCLGAREFAIFREVYFPASLPHIFTGLTVGMGVAWVSLIAAE 252 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + S G+G + E+ + ++ LG++ + L + + Sbjct: 253 MISG------QFGIGYFTWEAYSLVQYADIALGMICIGVLGLGSSMLI 294 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 13 RRIFPNIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 R + L+ F+ ++ + P + D + + + + Sbjct: 58 RALLIGAVALVLFLFAWHLLTANRVVFFVRFTNVPSPAAVYDSLTRAMHDSKFFMHVLLS 117 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L ++ L + + + + L PI ++++ IP + ++ ++ + Sbjct: 118 CRRILIGFSLAALIAVPLGMVMGRFKLIHEALFPISEVLRPIPAIAWVPMAIMLW----- 172 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E + +F F + + + + + L S+ + F + P S Sbjct: 173 ---PTNEQSIVFITFLGSFFPILVNTLHGMKLVDPVLVRASQCLGAREFAIFREVYFPAS 229 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + + M W ++A+EMI GIG + A I M+ + Sbjct: 230 LPHIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYADIALGMICI 283 Query: 249 LGVIF---LYDQLLFRPMIVWS 267 + + + L R ++ WS Sbjct: 284 GVLGLGSSMLIRGLGRLVMPWS 305 >gi|50122424|ref|YP_051591.1| glycine betaine transporter membrane protein [Pectobacterium atrosepticum SCRI1043] gi|49612950|emb|CAG76401.1| glycine betaine/L-proline transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 393 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q +++ + ++ I + A T +L+A+ + Sbjct: 139 LLGMPAPIAILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 198 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S R + P+LD MQ+ P +L V+ F G V G + IF Sbjct: 199 LIGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 255 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 256 A-----LPPIIRLTILGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 310 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 311 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 361 Score = 97.7 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + P Sbjct: 101 PLDSWV------THGIDWVVLHFRPIFQGIRVPVDFILGGFQQFLLGMPAPI-------- 146 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F ++G+ ++ ++ + IT+ V+ + + Sbjct: 147 ---AILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAM----ITLALVLTALFFCVL 199 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 200 IGLPMGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 255 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + + LP P + G A + Sbjct: 256 ALPPIIRLTILGIRQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 315 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 316 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 361 >gi|330967519|gb|EGH67779.1| taurine ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 285 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYI 367 + L R + S + +L ++W G + +G Sbjct: 14 GIANLADKPPAARRPQVYPSTRTISALTLVTLLALWWAVTAGGWIEPLFLPPPADVLGKG 73 Query: 368 VNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 T + +W ++ R+ + + A++ IPVGI IG P + Sbjct: 74 WQLMTKGYMDSTLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYR 133 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P + PL+V + LL+ I G A S Sbjct: 134 PIPPLAYLPLIVIWFGIGEFSK----VLLIYLAIFAPIAIATATGVRTVDPTRVRAAQSL 189 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 T W+ R++I+P P +TG G W+ + +E+ + T+GLG + + Sbjct: 190 GATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSA 243 Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + VVLG+L++ A+ R L L + Sbjct: 244 AQFLVTDVVVLGILVIAIIAFAMELGLRALQRKLVPW 280 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ + L ++R V P+++ + IP L +L Sbjct: 84 STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYRPIPPLAYLPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTRVRAAQSLGATRWQ 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 249 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281 >gi|322832872|ref|YP_004212899.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] gi|321168073|gb|ADW73772.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] Length = 293 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 19/264 (7%) Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---- 382 P + + + + +F V V Q+ + + Sbjct: 38 VPLRPVASRRRWFLGFCFFVLFFAVWALVTFTGLVSPTFLASPASMLQEGILLFTDFDFT 97 Query: 383 --GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +T+ RV+ I+A I +P+GI +G I + +PF PA+ F PL++ Sbjct: 98 TDIGMTVMRVLGGFILACAIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILW 157 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + L++ G+ + I V A D E A + T R +I+P Sbjct: 158 AGIGEMQK----VLVIFIGSFFQITLMVAVTVGAARRDLVEAAYTLGATNQSVVRRVIIP 213 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P G AW IV+E+ ++G+G I S + +++ G++ Sbjct: 214 GAAPEIAELLRLVLGWAWTYVIVAELIG------SSSGIGHMIVNSQALLNTGQMIFGII 267 Query: 561 IMCCFVLALNRFLW---HPLYLYG 581 ++ C L + L+++ Sbjct: 268 VIGCIGLLSDLLFKAANRRLFVWS 291 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 92/266 (34%), Gaps = 18/266 (6%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQY 64 + P RR F + F V ++ L P ++ + Sbjct: 40 LRPVASRRRWFLGFCFFVLFFAVWALVTFTGLVSPTFLASPASMLQEGILLFTDFDFTTD 99 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T +R+L +++ L + + P + + +P F+ +++ Sbjct: 100 IGMTVMRVLGGFILACAIAVPLGILMGSYKLIEAFFEPFVSFCRYLPASAFVPLLILWAG 159 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E+ + IF + +T + ++ RDL E + + + + Sbjct: 160 IG--------EMQKVLVIFIGSFFQITLMVAVTVGAARRDLVEAAYTLGATNQSVVRRVI 211 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P + + + + W +V+ +E+I GIG I + + +++ Sbjct: 212 IPGAAPEIAELLRLVLGWAWTYVIVAELIGSSS------GIGHMIVNSQALLNTGQMIFG 265 Query: 245 MLTMLGVIFLYDQLLF---RPMIVWS 267 ++ + + L D L R + VWS Sbjct: 266 IIVIGCIGLLSDLLFKAANRRLFVWS 291 >gi|73668564|ref|YP_304579.1| sulfonate ABC transporter permease [Methanosarcina barkeri str. Fusaro] gi|72395726|gb|AAZ69999.1| sulfonate ABC transporter, permease protein [Methanosarcina barkeri str. Fusaro] Length = 261 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 11/198 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + ++ + I A +I IP+GI +G+ I+ I P ++L P + P + Sbjct: 59 IFTDTLTSLINFSIGIAGAFVIGIPLGIAMGWFKEINRAIDPIIEILRPIPPIAWIPFAI 118 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYI 497 H ++ G + I+ N G P + E A T RYI Sbjct: 119 IWFGLTH----QAAGFVVFAGMVFPIIINTYTGFKNVPKVYVEAARVLGCTRNLDLIRYI 174 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +P P V G A G W + +E+ +GLG I + V++ Sbjct: 175 AIPSAMPSIVAGIRIAMGVGWMCLVAAEMFG------SDSGLGYEIWHNYYMHRMDFVLV 228 Query: 558 GVLIMCCFVLALNRFLWH 575 +L++ L ++RF Sbjct: 229 YMLLLGFVGLLIDRFFRR 246 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 94/246 (38%), Gaps = 16/246 (6%) Query: 22 LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 L+ + + + +++ + D++ + + + + + + Sbjct: 19 LIVAIAIWQLAADVIVQNKFKLPSFYDVIISFSAIVKSGLIFTDTLTSLINFSIGIAGAF 78 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + PI++I++ IP + ++ F +++F AA F Sbjct: 79 VIGIPLGIAMGWFKEINRAIDPIIEILRPIPPIAWIPFAIIWFGL--------THQAAGF 130 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMS 199 +F V+ + + Y N+P+ E +R + Y+ +P +MP +V + ++ Sbjct: 131 VVFAGMVFPIIINTYTGFKNVPKVYVEAARVLGCTRNLDLIRYIAIPSAMPSIVAGIRIA 190 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 M GW +VA+EM G+G I + +L ML + V L D+ Sbjct: 191 MGVGWMCLVAAEMFGSDS------GLGYEIWHNYYMHRMDFVLVYMLLLGFVGLLIDRFF 244 Query: 260 FRPMIV 265 R + Sbjct: 245 RRYVDA 250 >gi|296120166|ref|ZP_06838719.1| nitrate ABC transporter, permease protein NrtB [Corynebacterium ammoniagenes DSM 20306] gi|295966858|gb|EFG80130.1| nitrate ABC transporter, permease protein NrtB [Corynebacterium ammoniagenes DSM 20306] Length = 260 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ ++A++I +PVG +G + + P Q+L + PL + Sbjct: 66 IFWHLLASLRRVLLGFLLAAVIALPVGFILGRSTTLRWAVDPVVQILRPVSPLAWLPLGL 125 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + +++ W IL N I + + +A + W YI Sbjct: 126 ALLK----DAENTAVFVILLSALWPILINTIDAVRSVNPTYINLADTIGTNWWSRIIYIW 181 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG + AW + +E+ G G+G ++ + + +V+ Sbjct: 182 LPASLPGIITGLRLSLSTAWLVIVAAEMLIGG------RGVGFFVWNAWNRLDIDAIVVA 235 Query: 559 VLIMCCFVLALNRFL 573 + I+ L L+ + Sbjct: 236 IFIIGIAGLVLDHLV 250 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 90/197 (45%), Gaps = 14/197 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R+L +++ + + +S L + P++ I++ + L +L + Sbjct: 68 WHLLASLRRVLLGFLLAAVIALPVGFILGRSTTLRWAVDPVVQILRPVSPLAWLPLGLAL 127 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + AE A+F I S +W + + ++ ++ ++ + + W + Y Sbjct: 128 LKD--------AENTAVFVILLSALWPILINTIDAVRSVNPTYINLADTIGTNWWSRIIY 179 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P S+PG++ + +S+S W +VA+EM++ G G+G ++ A D+ AI+ Sbjct: 180 IWLPASLPGIITGLRLSLSTAWLVIVAAEMLIGG------RGVGFFVWNAWNRLDIDAIV 233 Query: 243 YAMLTMLGVIFLYDQLL 259 A+ + + D L+ Sbjct: 234 VAIFIIGIAGLVLDHLV 250 >gi|260654834|ref|ZP_05860322.1| ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] gi|260630549|gb|EEX48743.1| ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] Length = 256 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 V+ IT+ RV A +I +PVG+ +G+ + P+ + P + PL Sbjct: 51 GKVMSNLYITLTRVFTGCAFAIMIGLPVGLLMGYSRTALVALSPYVNSIRQVPIMAWVPL 110 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + ++ + IL N I+G ++K A W+ R Sbjct: 111 SIIWFGLGDG----PTIFMITMSAVFPILINTISGVMNIDPNYKNAARCMGAKTWQVMRD 166 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LPG P ++TG A G AW + I +E + +TG G + E+ + P + Sbjct: 167 VVLPGALPNFLTGCRLALGSAWMSVICAEFIA------TSTGFGYIMVEAQVRMQTPLLY 220 Query: 557 LGVLIMCCFVLALN 570 +++ A++ Sbjct: 221 ALMIMSALVGFAID 234 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 78/205 (38%), Gaps = 17/205 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ + +++ L SR + L P ++ ++ +PI+ ++ ++++F Sbjct: 60 TLTRVFTGCAFAIMIGLPVGLLMGYSRTALVALSPYVNSIRQVPIMAWVPLSIIWFGLGD 119 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 IF I S V+ + + + NI + + +R WQ + +P Sbjct: 120 GP--------TIFMITMSAVFPILINTISGVMNIDPNYKNAARCMGAKTWQVMRDVVLPG 171 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + +++ W V+ +E I G G + A + M+ Sbjct: 172 ALPNFLTGCRLALGSAWMSVICAEFIATST------GFGYIMVEAQVRMQTPLLYALMIM 225 Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269 V F DQ LL R + W K Sbjct: 226 SALVGFAIDQSIVLLERCLTGWRYK 250 >gi|209885998|ref|YP_002289855.1| binding-protein-dependent transport systems inner membrane component [Oligotropha carboxidovorans OM5] gi|209874194|gb|ACI93990.1| binding-protein-dependent transport systems inner membrane component [Oligotropha carboxidovorans OM5] Length = 283 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 11/200 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ RV+V + A +I +P+G+ +G ++ P Q L + P+ V Sbjct: 91 MVSLRRVLVGLGFALLIGVPLGLAVGSYARLNIATSPAFQFLRMISPLSWMPIAVMVFGV 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ F W IL N G + +A S T W ++ILPG+ Sbjct: 151 GDN----PIYFMLAFAAVWPILLNTAEGVRRLQPSWLSLADSLAATRWETLWHVILPGVL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + +TG A G W + E+ + GLG +I ++ ++ ++ E++ VL++ Sbjct: 207 GHVLTGLRLAIGIVWIVLVPCEMLG------VSAGLGYFILDTRDRLAYSELMATVLMIG 260 Query: 564 CFVLALNRFLWHPLYLYGTR 583 L+ LY TR Sbjct: 261 ILGFMLDAGA-RALYQAATR 279 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 79/220 (35%), Gaps = 14/220 (6%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G P + + L LP + + R+L + +LL RL Sbjct: 62 EGFIRQFSPTTAIPKLAAMLAGPDLPVHIMVSLRRVLVGLGFALLIGVPLGLAVGSYARL 121 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 + P ++ I L ++ V+ F + F + + VW + + + Sbjct: 122 NIATSPAFQFLRMISPLSWMPIAVMVFGVG--------DNPIYFMLAFAAVWPILLNTAE 173 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + + ++ S + W+ W++ +P + ++ + +++ W +V EM+ V Sbjct: 174 GVRRLQPSWLSLADSLAATRWETLWHVILPGVLGHVLTGLRLAIGIVWIVLVPCEMLGVS 233 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 G+G +I ++ +L + + F+ D Sbjct: 234 A------GLGYFILDTRDRLAYSELMATVLMIGILGFMLD 267 >gi|227329900|ref|ZP_03833924.1| glycine betaine transporter membrane protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 415 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q +++ + ++ I + A T +L+A+ + Sbjct: 161 LLGMPAPIAILVFSLIAWQMSSLGMGVATLLSLIAIGAIGAWSQAMITLALVLTALFFCV 220 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S R + P+LD MQ+ P +L V+ F G V G + IF Sbjct: 221 LIGLPVGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 277 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 278 A-----LPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 332 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 333 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 383 Score = 97.7 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 97/303 (32%), Gaps = 21/303 (6%) Query: 272 LERTTGIYPADSWVLYLFRKT--NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329 L P +L F+ T ++ + + + + I F + Sbjct: 100 LNSAAPATPEHFNLLDPFKDTLIPLDSWVTHGIDWVVLHFRPIFQGVRVPVDFILGGFQQ 159 Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389 L + + + I W G+ + I + IT+ Sbjct: 160 FLLGMPAPIAILVFSLIAWQMSSLGMGVATLLSLIAI--------GAIGAWSQAMITLAL 211 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 V+ + +I +PVGIW+ + I+P + PA V+ +V N Sbjct: 212 VLTALFFCVLIGLPVGIWLARSERAAKFIRPLLDAMQTTPAFVYLVPIVMLFGIG----N 267 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + ++ I I+ I G P D E A SF + + + LP P + G Sbjct: 268 VPGVVVTIIFALPPIIRLTILGIRQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAG 327 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 A + +++ + + G GLG + + +G + + + L Sbjct: 328 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIIL 380 Query: 570 NRF 572 +R Sbjct: 381 DRL 383 >gi|209884786|ref|YP_002288643.1| taurine transport system permease protein TauC [Oligotropha carboxidovorans OM5] gi|209872982|gb|ACI92778.1| taurine transport system permease protein TauC [Oligotropha carboxidovorans OM5] Length = 286 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 74/197 (37%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + + +RV + + ++ +P+G+ IG+ P ++L P + PL Sbjct: 83 GDLFLAIGWSCYRVFMGFGLGMLLAVPLGVAIGWSRVCEDLFNPIVEILRPIPPLAWIPL 142 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + + + + G+ + IL IAG E A + + + Sbjct: 143 SIIWLGVGFKS----VLFITTLGSFFPILVATIAGVRNVDRRMIEFARTLGASTGQILLK 198 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++P P G A G +W + +E+ S GLG I ++ V+ Sbjct: 199 VVIPAAMPQTFVGMRIAVGFSWMVVVAAEMIS------VKYGLGWLIWKARFSFDTATVM 252 Query: 557 LGVLIMCCFVLALNRFL 573 G+ I+ + + + + Sbjct: 253 AGMAIIGLLSVLMTKAM 269 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 14/213 (6%) Query: 47 DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 D++ V + L + R+ + +L SR + PI++I Sbjct: 71 DVLKSVWVNAVEGDLFLAIGWSCYRVFMGFGLGMLLAVPLGVAIGWSRVCEDLFNPIVEI 130 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 ++ IP L ++ ++++ + + +F + + + + N+ R + Sbjct: 131 LRPIPPLAWIPLSIIWLGVGF--------KSVLFITTLGSFFPILVATIAGVRNVDRRMI 182 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 E +R+ S Q + +P +MP M +++ W VVA+EMI V G+G Sbjct: 183 EFARTLGASTGQILLKVVIPAAMPQTFVGMRIAVGFSWMVVVAAEMISVK------YGLG 236 Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 I A D ++ M + + L + + Sbjct: 237 WLIWKARFSFDTATVMAGMAIIGLLSVLMTKAM 269 >gi|289193148|ref|YP_003459089.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus sp. FS406-22] gi|288939598|gb|ADC70353.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus sp. FS406-22] Length = 269 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 23/254 (9%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLI 394 + + + W + + + + +VN T+ +I +++ RV+ Sbjct: 25 LPIAVVVAWEILAIYINNPVILPRVEAVVNVLTHPFEGILGTGSLIDNTIVSIKRVLGGF 84 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++AS + IP+GI +G+ I+S +LL P + PL ++ ++ + + Sbjct: 85 LLASAVAIPLGILMGYYRTINSLCDTLIELLRPIPPLAWVPLSLAWFGLGEMSMIFIIFI 144 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 F IL N I+G + P E A + G +++P P +TG Sbjct: 145 GAFFP----ILINTISGVKSVPTPLIEAALTLGAKGRDILIKVVIPASSPSILTGLRVGA 200 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR--- 571 G AW + +E+ GLG I + V+ ++I+ L L+R Sbjct: 201 GIAWMCVVAAEMLPS-----SNAGLGYLIMYAYSLSRMDVVIACMIIIGLIGLVLDRGLR 255 Query: 572 ------FLWHPLYL 579 F+W + Sbjct: 256 YIEDKYFVWRKMMK 269 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 82/204 (40%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L SL + R+L +++ L R + + ++++++ IP L + Sbjct: 64 LGTGSLIDNTIVSIKRVLGGFLLASAVAIPLGILMGYYRTINSLCDTLIELLRPIPPLAW 123 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + ++ +F E++ IF IF + + + + ++P L E + + Sbjct: 124 VPLSLAWFGLG--------EMSMIFIIFIGAFFPILINTISGVKSVPTPLIEAALTLGAK 175 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 G + +P S P ++ + + W VVA+EM+ + G+G I A Sbjct: 176 GRDILIKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPSSNA-----GLGYLIMYAYSL 230 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ M+ + + + D+ L Sbjct: 231 SRMDVVIACMIIIGLIGLVLDRGL 254 >gi|295706799|ref|YP_003599874.1| aliphatic sulfonates ABC transporter permease SsuC [Bacillus megaterium DSM 319] gi|294804458|gb|ADF41524.1| aliphatic sulfonates ABC transporter, permease protein SsuC [Bacillus megaterium DSM 319] Length = 284 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 94/236 (39%), Gaps = 17/236 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P DI+ + L + LR + ++ + S+R + Sbjct: 63 LPTPGDIILSFKQLIVSGELGANLQISILRAAIGFAVGAGLGLLFGVIVGFSKRTEHYMD 122 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + +++++P L +++F E++ I I + + + Y + + Sbjct: 123 PSIQMLRTVPHLALAPLFILWFG--------FGEISKILLIANGAFFPIYVNTYLGIRGV 174 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L +V+R + S W++ L +P ++P ++ + +S+ W +V +E++ + Sbjct: 175 DSKLFDVARVLQFSKWKQITKLILPAALPNILLGVRLSLGIAWLGLVVAELMGASE---- 230 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274 G+G I A + + ++ V L D ++L + ++ W + + E+ Sbjct: 231 --GVGYMIMDARQFSQTDVVFVGIIIFAVVGKLTDSFVRVLEKRLLKWRDSYAGEK 284 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ R + + + + + G+ +GF + P Q+L P PL + + Sbjct: 88 ISILRAAIGFAVGAGLGLLFGVIVGFSKRTEHYMDPSIQMLRTVPHLALAPLFILWFGFG 147 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ LL+ G + I N G + +VA + W+ +ILP P Sbjct: 148 EISK----ILLIANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALP 203 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G AW +V+E+ + G+G I ++ + V +G++I Sbjct: 204 NILLGVRLSLGIAWLGLVVAELMG------ASEGVGYMIMDARQFSQTDVVFVGIIIFAV 257 Query: 565 FVLALNRFL 573 + F+ Sbjct: 258 VGKLTDSFV 266 >gi|218531602|ref|YP_002422418.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|240140097|ref|YP_002964574.1| ABC superfamily transporter membrane protein [Methylobacterium extorquens AM1] gi|218523905|gb|ACK84490.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] gi|240010071|gb|ACS41297.1| ABC superfamily transporter membrane protein [Methylobacterium extorquens AM1] Length = 287 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV+ + A + + +G+ IG + P ++L PA + PL + Sbjct: 91 GASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFP- 149 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + ++ + G + IL N + G + A S R +ILPG Sbjct: 150 ---SSEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAA 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P VTGA G AW + +E+ S + G+G + ES ++ ++V+G+L++ Sbjct: 207 PSIVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLIG 260 Query: 564 CFVLA 568 + Sbjct: 261 LLGMG 265 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 14/215 (6%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 + P + +LP + + R+LS + +L +SR Sbjct: 64 FRNVPTPAAAAQAAWALVHAPALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARD 123 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L+P L++++ IP + ++ ++ F +E++ F FT ++ + + + Sbjct: 124 LLLPPLEVLRPIPAVAWIPLAILMF--------PSSEVSMAFITFTGALFPILLNTVHGV 175 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 ++ L +RS + +P + P +V + M WF +V +EMI Sbjct: 176 ESVHPRLVAAARSLGAGDAAILREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMISG--- 232 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 GIG + + Q+ I+ ML + + Sbjct: 233 ---QYGIGYFTWESYTLQNYDDIVVGMLLIGLLGM 264 >gi|107028845|ref|YP_625940.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116689996|ref|YP_835619.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|105898009|gb|ABF80967.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116648085|gb|ABK08726.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 291 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 104/285 (36%), Gaps = 28/285 (9%) Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGY 366 ++ + + R L + +R + M W + +A+ A Sbjct: 1 MAATLDLVKRRLADAPRSGDTRSPHSAARRRSTPMRRRAWRIASLAACIALWQAAVHWRL 60 Query: 367 IVNHFTYQDVL----------------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + T+ +V + ++ RV+ + A++ I +G+ IG Sbjct: 61 SLGIVTFANVPAPSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVTGIGLGLAIGR 120 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 + + P ++L PA + PL + L+ + + G + IL N + Sbjct: 121 YRALEDTLLPPLEMLRPIPAVAWIPLAILMFPSSELS----MMFITFVGALFPILLNTVH 176 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 GA A A S G + +ILPG P TG G AW + +E+ + Sbjct: 177 GAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIAGQ 236 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + G+G + ES ++P++V+G+ ++ + + + Sbjct: 237 Y------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ + P D+ + L LP + + R+L+ V + + Sbjct: 60 LSLGIVTFANVPAPSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVTGIGLGLAIG 119 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R L L+P L++++ IP + ++ ++ F +EL+ +F F ++ + Sbjct: 120 RYRALEDTLLPPLEMLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + L +RS G + + +P + P + + + M WF +V +E Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAE 231 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 MI GIG + + Q+ I+ M + + L+ R Sbjct: 232 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 >gi|242280135|ref|YP_002992264.1| ABC transporter transmembrane protein [Desulfovibrio salexigens DSM 2638] gi|242123029|gb|ACS80725.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio salexigens DSM 2638] Length = 278 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 80/216 (37%), Gaps = 21/216 (9%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 + + +++ RV++ +A+ + IP+G+ +G+ + F L P + P Sbjct: 55 MGSLAGNVLVSLVRVIMGYTLAAAVAIPLGVVMGYYGVVFKFFNGFLNLFRPIPPLAWVP 114 Query: 436 LVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 LV++ L N + ++ G + IL + I G Sbjct: 115 LVMAWFGISSLATLSGVETGQLYIYLDNIKFSMLFIIFIGAFYPILTSTIHGVRNVNKTL 174 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + A + +R +++P P +TG G AW + +E+ +G+ Sbjct: 175 IDSARVLGANERQIFRKVLIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-----SLSGI 229 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 G I + S V+ G++ + A++ H Sbjct: 230 GYMITHAFTLASTDIVIAGMISIGAVGAAMDAVFRH 265 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 17/221 (7%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 + + + + SL + +R++ ++ + + L++ Sbjct: 45 VFNPTEDLISMGSLAGNVLVSLVRVIMGYTLAAAVAIPLGVVMGYYGVVFKFFNGFLNLF 104 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAI------------FAIFTSQVWNMTFSMY 155 + IP L ++ + +F + G E + F IF + + S Sbjct: 105 RPIPPLAWVPLVMAWFGISSLATLSGVETGQLYIYLDNIKFSMLFIIFIGAFYPILTSTI 164 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + N+ + L + +R + Q F + +P +MP ++ M + + W +V++EM+ Sbjct: 165 HGVRNVNKTLIDSARVLGANERQIFRKVLIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG 224 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 L GIG I A ++ M+++ V D Sbjct: 225 -----SLSGIGYMITHAFTLASTDIVIAGMISIGAVGAAMD 260 >gi|241896021|ref|ZP_04783317.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Weissella paramesenteroides ATCC 33313] gi|241870752|gb|EER74503.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Weissella paramesenteroides ATCC 33313] Length = 575 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 96/236 (40%), Gaps = 16/236 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + ++ I +L ++ VP I I ++ L T ++ + +IS++ Sbjct: 55 VWLFIIGITIFAILMFGKKWGVPFFTF-IGLIIVENQGLWSDLMSTFTLVIISSLISVII 113 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 AK+ + ++ PILD MQ++P +L V +F G V G + IFA Sbjct: 114 GVPLGIWMAKNETVNKIIQPILDFMQTMPAFVYLIPAVAFFG---IGVVPGVFASVIFA- 169 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +P DL E + SF +G QK + + +P + + + ++ Sbjct: 170 ----LPPTVRMSNLGIRQVPTDLVEAADSFGSTGKQKLFKVELPLAQGTIFSGINQTLML 225 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ D+ +++ + + D+ Sbjct: 226 ALSMVVIASMI-------GAPGLGRGVLSAVQNADIGKGFVNGFSLVVLAIIIDRF 274 Score = 91.9 bits (227), Expect = 3e-16, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 77/238 (32%), Gaps = 11/238 (4%) Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394 + + L I + + G W + + + T V++ Sbjct: 48 GALSAIPVWLFIIGITIFAILMFGKKWGVPFFTFIGLIIVENQGLWSDLMSTFTLVIISS 107 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+ II +P+GIW+ ++ IQP + PA V+ V+ + + Sbjct: 108 LISVIIGVPLGIWMAKNETVNKIIQPILDFMQTMPAFVYLIPAVAFFGIGVVPGVFASVI 167 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + G P D E A SF TG + + LP +G Sbjct: 168 F----ALPPTVRMSNLGIRQVPTDLVEAADSFGSTGKQKLFKVELPLAQGTIFSGINQTL 223 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A + +++ + GLG + + + + + + + ++RF Sbjct: 224 MLALSMVVIASMIG-------APGLGRGVLSAVQNADIGKGFVNGFSLVVLAIIIDRF 274 >gi|291616929|ref|YP_003519671.1| SsuD [Pantoea ananatis LMG 20103] gi|291151959|gb|ADD76543.1| SsuD [Pantoea ananatis LMG 20103] Length = 649 Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 17/239 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P IV L Q+ + ++ R L I V + SR +L Sbjct: 425 LPAPEKIVTTFWQLAVSGELWQHLAISSWRALLGFSIGGSLGLVLGLITGTSRLGERLLD 484 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 L +++++P L + +++F E A IF + ++ + + Y + N+ Sbjct: 485 TSLQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRNV 536 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 R L E++RS+ LSGW F + +P ++P ++ + ++ W ++ +E I Sbjct: 537 DRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWLTLIVAETISANA---- 592 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTG 277 GIG A + ++ A++ + L D LL R + W ++ + T Sbjct: 593 --GIGYLAMNAREFLQTDVVMVAIILYALLGKLADVSALLLERVWLRWHPAYQRQEKTA 649 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 20/227 (8%) Query: 367 IVNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 IV F V +W I+ +R ++ I + + +G+ G + Q+L Sbjct: 431 IVTTFWQLAVSGELWQHLAISSWRALLGFSIGGSLGLVLGLITGTSRLGERLLDTSLQML 490 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P PLV+ L+ GT + I N G E+A S Sbjct: 491 RNVPHLALIPLVILWFGI----DESAKIFLVALGTLFPIYLNTYHGIRNVDRGLVEMARS 546 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + ++GW + +ILPG P + G A G W IV+E S G+G Sbjct: 547 YGLSGWSLFVQVILPGALPSIMVGVRFALGLMWLTLIVAETIS------ANAGIGYLAMN 600 Query: 546 STEKGSFPEVVLGVLIMCCFV-------LALNRFL--WHPLYLYGTR 583 + E V++ +++ L L R WHP Y + Sbjct: 601 AREFLQTDVVMVAIILYALLGKLADVSALLLERVWLRWHPAYQRQEK 647 >gi|170742628|ref|YP_001771283.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168196902|gb|ACA18849.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 277 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 96/254 (37%), Gaps = 13/254 (5%) Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 +P ++ +L G + +L S + + + V + ++ Sbjct: 1 MTPRTSFATRLSALRGALLPIGLLILWELASRAGLFSAVVLPPPSAVAARWVQSLVPALP 60 Query: 366 YIVNHFTYQDVL---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 Y +Y + L + ++ RVV I + +PVG+ +G + + P Sbjct: 61 YDPQSQSYGEWLLSGELPHDAVASLGRVVAGFAIGVGLALPVGLLMGTSDRLYGLVNPLL 120 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q+L P + PL + N L+ GT + +L N IAG + + Sbjct: 121 QILRPIPPIAYIPLAIVWFGLG----NPPALFLIALGTFFPVLVNTIAGVRQVDSIYIRA 176 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A + W +R +ILP P+ + G G A+ IV+E+ + + GLG Sbjct: 177 ARNLGAGPWTLFRRVILPAASPFVLAGMRIGIGTAFIVVIVAEMIA------VSDGLGYR 230 Query: 543 IAESTEKGSFPEVV 556 I E+ E +++ Sbjct: 231 ILEAREYMWSDKII 244 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 94/240 (39%), Gaps = 18/240 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRTTLRMLSAMVISLL 81 +V+ + + ++ VP D + L LP A + R+++ I + Sbjct: 38 AVVLPPPSAVAARWVQSLVPALPYDPQSQSYGEWLLSGELPHDAVASLGRVVAGFAIGVG 97 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 L S RL ++ P+L I++ IP + ++ +V+F P A+F Sbjct: 98 LALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPLAIVWFGLGNPP--------ALFL 149 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + + +R+ W F + +P + P ++ M + + Sbjct: 150 IALGTFFPVLVNTIAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAASPFVLAGMRIGIG 209 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + V+ +EMI V D G+G I A + I+ MLT+ + L D + R Sbjct: 210 TAFIVVIVAEMIAVSD------GLGYRILEAREYMWSDKIIGGMLTIGLLGLLIDAAMSR 263 >gi|218779229|ref|YP_002430547.1| binding-protein-dependent transport systems inner membrane component [Desulfatibacillum alkenivorans AK-01] gi|218760613|gb|ACL03079.1| binding-protein-dependent transport systems inner membrane component [Desulfatibacillum alkenivorans AK-01] Length = 276 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 95/262 (36%), Gaps = 24/262 (9%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD-----VLYVIWLG 383 + + + L + W + + + + ++ Sbjct: 5 KRIGRQAGRFVLPLALAVLWQAAAIWLDKQTVLPRLDAVAAVLFHPTEKILITGSLLENM 64 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RV++ ++A + +P+G+ +G+ ++ + ++L P + PL+++ + Sbjct: 65 AISLLRVILGFLLAVLTAVPLGLAMGYFKRVNHMVDSTVEMLRPIPPLAWVPLILAWLGI 124 Query: 444 YHLNPNLW--------------LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + +++ G + IL N I G + P ++ E A + Sbjct: 125 RGVPDIFPFLATSPIWSGIQFSTLIIIFIGAFFPILLNTIQGVRSIPREYIESARTLGAK 184 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 G I++P P VTG G W + +E+ ++GLG I + E Sbjct: 185 GLPLLVKILIPASLPLIVTGLRIGLGIGWMCLVAAEMMPG-----SSSGLGYLIWYAYEL 239 Query: 550 GSFPEVVLGVLIMCCFVLALNR 571 +V G++ + ++R Sbjct: 240 LRADIIVAGMVAIGAIGFIMDR 261 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 90/209 (43%), Gaps = 15/209 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL + + + LR++ ++++L +R+ ++ +++++ IP L ++ Sbjct: 58 GSLLENMAISLLRVILGFLLAVLTAVPLGLAMGYFKRVNHMVDSTVEMLRPIPPLAWVPL 117 Query: 119 TVVYFMNLYPGKVI----------GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 + + + G + + + IF + + + Q + +IPR+ E Sbjct: 118 ILAWLGIRGVPDIFPFLATSPIWSGIQFSTLIIIFIGAFFPILLNTIQGVRSIPREYIES 177 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 +R+ G + +P S+P +V + + + GW +VA+EM+ + G+G Sbjct: 178 ARTLGAKGLPLLVKILIPASLPLIVTGLRIGLGIGWMCLVAAEMMPGSSS-----GLGYL 232 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 I A + I+ M+ + + F+ D+ Sbjct: 233 IWYAYELLRADIIVAGMVAIGAIGFIMDR 261 >gi|317486680|ref|ZP_07945497.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316922063|gb|EFV43332.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 289 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+++RV ++A+++ +P G+++G+ P + L P + PL + Sbjct: 93 GISVWRVFQAFMLATLLGVPTGLFMGWNKTFKDYSFPLLETLRPIPMLAWVPLAILMWPG 152 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L G+ + + N + G + + A S + +ILPG Sbjct: 153 REAS----IVFLTFLGSYFATVLNTLLGVESIDESYFRAARSLGARPRDVFFKVILPGAM 208 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ TG + G AW + + E+ + + GLG I S +P +++ ++ + Sbjct: 209 PFIFTGLQISMGYAWFSLVAGEMLAGEY------GLGYLIWNSFMLVQYPVIIIAMITLG 262 Query: 564 CFV---LALNRFLWHPLYLY 580 L R + + L + Sbjct: 263 VIGSLSSLLIRMIGNRLMQW 282 Score = 116 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 82/209 (39%), Gaps = 17/209 (8%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + R+ A +++ L ++ P+L+ ++ IP+L ++ ++ + Sbjct: 91 HIGISVWRVFQAFMLATLLGVPTGLFMGWNKTFKDYSFPLLETLRPIPMLAWVPLAILMW 150 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 G E + +F F + + + +I +RS F+ + Sbjct: 151 --------PGREASIVFLTFLGSYFATVLNTLLGVESIDESYFRAARSLGARPRDVFFKV 202 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P +MP + + +SM WF +VA EM+ G+G I + I+ Sbjct: 203 ILPGAMPFIFTGLQISMGYAWFSLVAGEMLAG------EYGLGYLIWNSFMLVQYPVIII 256 Query: 244 AMLTMLGVI---FLYDQLLFRPMIVWSNK 269 AM+T+ + L +++ ++ W + Sbjct: 257 AMITLGVIGSLSSLLIRMIGNRLMQWKVR 285 >gi|302331920|gb|ADL22113.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JKD6159] Length = 253 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + + + Q+ + + R ++ V++LL L ++R L + Sbjct: 37 LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIE 96 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ +++ I + + F V++F L AI IF + + + F+ + + +I Sbjct: 97 PLFQLIRPISPIAWAPFVVLWFGIG--------SLPAIAIIFIAAFFPIVFNTIKGVRDI 148 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +++ + L+GW + + P + ++ + M++ W F+V+ EMI Sbjct: 149 EPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A +L +L A+ + F+ D+ + Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240 >gi|70733713|ref|YP_257353.1| aliphatic sulfonates ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348012|gb|AAY95618.1| aliphatic sulfonates ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 531 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 73/565 (12%), Positives = 178/565 (31%), Gaps = 74/565 (13%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P IS+R+ P + + F L + + ++ +V + L L + + + Sbjct: 22 PLISQRLLPWLLPISLFAL-WWLASRNQWMSEQILPAPALVWSSALELAHGELWSHLAIS 80 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ ++ + + SRRL ++ P + IP L ++ +V+F Sbjct: 81 LQRLFWGLLAGIAAGALLGGALGFSRRLERLVFPTFGALSQIPTLAWIPLFMVFFGIG-- 138 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E+ + + + V +T + + L E + RL L +P + Sbjct: 139 ------EVLKLVVLIKAVVVPVTLHTLVGVRDAQPRLREAAAVLRLPPALLVRRLVLPAA 192 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + ++++ GW ++A E++ + GIG + A + L + +L + Sbjct: 193 LPAFMAGVRLALATGWTSLLAVELLASSE------GIGYLMVWARQLFMLDIVFVCILVI 246 Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 + D+ + R ++ W + E FR+ + Sbjct: 247 GLLGVCMDRGIGWLDRRLVHWPHPATAE---------------FRRGPRYQGWQRLQPWL 291 Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG 365 + ++ + + + L + + + + + + +G Sbjct: 292 LPLALLALWQVASDQQWVDPNILPSPLAVLATTGNGLLDGSLLGGMGLSLGRTLGGLLLG 351 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + + + + + + IA W+P+ Sbjct: 352 GGLGFAFGLLLGLSRFSERLLGPTLAAIRQIAIFAWVPL--------------------- 390 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 + + L + + + + + E A Sbjct: 391 -----------LTAWFGLGELAKWV----FVALAAFFPLFIATQRSVAQLSPQLAEAAQV 435 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + W+ R ++LPG P G + AW +I +E G+G+ + Sbjct: 436 LRLNLWQRLRRLVLPGAAPGIFAGLRISLIYAWLGTIGAEYFM-----PSNGGIGSQMIS 490 Query: 546 STEKGSFPEVVLGVLIMCCFVLALN 570 + + ++ G+L++ LN Sbjct: 491 AQQLLRMDLIMAGMLLVGLTGALLN 515 Score = 90.8 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 14/179 (7%) Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 SR +L P L ++ I I ++ +F K + LAA F +F Sbjct: 365 SRFSERLLGPTLAAIRQIAIFAWVPLLTAWFGLGELAKWVFVALAAFFPLF--------I 416 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + +S+ + L E ++ RL+ WQ+ L +P + PG+ + +S+ W + +E Sbjct: 417 ATQRSVAQLSPQLAEAAQVLRLNLWQRLRRLVLPGAAPGIFAGLRISLIYAWLGTIGAEY 476 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + + GIGS + A + + I+ ML + L + L+ + + + + ++R Sbjct: 477 FMPSN-----GGIGSQMISAQQLLRMDLIMAGMLLVGLTGALLN-LIGQQLELRATRWR 529 >gi|332283820|ref|YP_004415731.1| ABC transporter permease protein [Pusillimonas sp. T7-7] gi|330427773|gb|AEC19107.1| ABC transporter permease protein [Pusillimonas sp. T7-7] Length = 693 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 86/593 (14%), Positives = 185/593 (31%), Gaps = 61/593 (10%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 ++ S+ I P + + V+G+ +L H + + + L V + Sbjct: 126 LTESLFFDGFSKDIPPLPW-----ITVVGLAALLGHWLGGWRTAL-LGAASFVYLAVFGV 179 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 Q + +T +L + + L + L +S V+ P+ D++QS+P +L VV Sbjct: 180 WQASMQTFSLVLITVPLVFLLGLIAGILMNRSPHFKSVITPLFDVLQSMPPFAYLVPIVV 239 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + +I L A+ + + L + + + E + + WQ W Sbjct: 240 LYGVGNVPAMIATALFAVPPVARC--------IALGLGGVSKGVIEAGQMMGCTRWQLLW 291 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P + L+ + + +V + +I G+GS + +++ L Sbjct: 292 RVQMPAARSALLVGLNQGVMQTLAMIVLAALIGAA-------GLGSELLTSLQSLRLGEA 344 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 L + ++ + + D+ S + L++ + P SW + + F+ S Sbjct: 345 LEQGIAIVVIAVVLDRF--------SRAYALKKPVYVDPGLSWWRRHPYLSLAIAFLLAS 396 Query: 302 SWNFFSP-----------------LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344 + + + L F L ++ Sbjct: 397 VSIASLLPELVLLTDKYGFTTAPYWNAGIDWINLNLYESVQAFRNFTLMEILIPTRNFFQ 456 Query: 345 DIFWFCVVCGVAI----GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 I W V VA+ W + + T++ + ++ Sbjct: 457 AIPWVTFVAVVALLGYRLGGWTVALIAGLLVLFPAATGLWHQAMTTLYMIGTAAVVCIST 516 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 +G+ S FP+ ++ VV L+ + + L + Sbjct: 517 GFFIGLLASRTAAWSRFASGVCDFFQTFPSFIYLIPVVMLFKVSDLSAIIAVLLFAVVPM 576 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 Y I G P E A+ T + + LP P + G A Sbjct: 577 IRY----TILGLRGVPTPIIEAATQQGTTRLQRLLKVELPIALPEIMLGVNQVIFMALFM 632 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ + LGA I + + ++ L + +A +R + Sbjct: 633 VAITALIGTQD-------LGAEINSARSGNEIGKALVAGLCIAFMGMAADRLI 678 >gi|332978589|gb|EGK15295.1| glycine/betaine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Psychrobacter sp. 1501(2011)] Length = 662 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 97/232 (41%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 LV+G+I +L + L +T ++ +++++++ Sbjct: 417 LVLGLIALLGWFATRKIWFAVACGAGLFLIGAFGLWPALVQTMALLIVSVLVTMVIGIPI 476 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L A S L V+ P+LD+MQ++P +L ++ F ++ A+FA Sbjct: 477 GILMAGSNVLRKVVTPVLDVMQTMPSFVYLIPVLMLFGIG--------KVPALFATVIYA 528 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + +P ++ E RSF + Q +++ +P ++P ++ + ++ Sbjct: 529 SPPLIRLTMLGIKQVPHEMVEAGRSFGSTHTQLLFWIKLPQALPNIMAGVNQAVMMSLSM 588 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + +I+ ++ L A ++ + + D++ Sbjct: 589 VVLASMI-------GAPGLGEDVLQSIQTLNIGQGLQAGTAIVIMAIIIDRI 633 Score = 97.3 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 109/303 (35%), Gaps = 18/303 (5%) Query: 276 TGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLC 335 T + + L + F + W+F + L+N++ + + G + F + Sbjct: 343 TSDSGSQTSTNDLAVNSTASAFAWFPEWSFETKLNNSLSYVVQNFGEV-FRSISHVALTY 401 Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFR 389 + +L + +V G+ + W + I L++I + TM Sbjct: 402 LLLPIENLLKVTPPWLVLGLIALLGWFATRKIWFAVACGAGLFLIGAFGLWPALVQTMAL 461 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 ++V +++ +I IP+GI + + + P ++ P+ V+ V+ Sbjct: 462 LIVSVLVTMVIGIPIGILMAGSNVLRKVVTPVLDVMQTMPSFVYLIPVLMLFGIG----K 517 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + + ++ + G P++ E SF T + +I LP P + G Sbjct: 518 VPALFATVIYASPPLIRLTMLGIKQVPHEMVEAGRSFGSTHTQLLFWIKLPQALPNIMAG 577 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 A + + +++ + GLG + +S + + + + + + + Sbjct: 578 VNQAVMMSLSMVVLASMIG-------APGLGEDVLQSIQTLNIGQGLQAGTAIVIMAIII 630 Query: 570 NRF 572 +R Sbjct: 631 DRI 633 >gi|269794999|ref|YP_003314454.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Sanguibacter keddieii DSM 10542] gi|269097184|gb|ACZ21620.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Sanguibacter keddieii DSM 10542] Length = 322 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 + RV+ +A+++ IP+G+ +G + P L P + PL + + Y Sbjct: 128 GASTVRVLSGFGLAALLAIPLGVIMGRFSLAFKMLDPTVNLTRPIPVTAWAPLTLLIIGY 187 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+ + IL N I+G P E AS + +ILP Sbjct: 188 GDGS----AIFLVFLAAFFPILLNTISGVRQVPVRLVEAASMLGTRSGQVLYKVILPASM 243 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 V G A G +W +V E +TGLGA I ++ + +V G++++ Sbjct: 244 RSIVGGLRIALGLSWVILVVGETVGI------STGLGAMITQARDMSKTDLIVAGMVVIG 297 Query: 564 CFVLALNRFL 573 +R L Sbjct: 298 LAGFVADRLL 307 Score = 116 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 81/201 (40%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L + +T+R+LS ++ L + + +L P +++ + IP+ + Sbjct: 121 GTLLDHLGASTVRVLSGFGLAALLAIPLGVIMGRFSLAFKMLDPTVNLTRPIPVTAWAPL 180 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 T++ +AIF +F + + + + + +P L E + Q Sbjct: 181 TLLIIGYGDG--------SAIFLVFLAAFFPILLNTISGVRQVPVRLVEAASMLGTRSGQ 232 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + +P SM +V + +++ W +V E + + G+G+ I A Sbjct: 233 VLYKVILPASMRSIVGGLRIALGLSWVILVVGETVGIST------GLGAMITQARDMSKT 286 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ M+ + F+ D+LL Sbjct: 287 DLIVAGMVVIGLAGFVADRLL 307 >gi|319793147|ref|YP_004154787.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315595610|gb|ADU36676.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 268 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 10/197 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 V+ ++ RV + +A+I + +G+ IG + P ++L PA + PL + Sbjct: 66 VLQHLSASLRRVFIGFGLAAIAGVALGLAIGRARWAEDTLLPPLEVLRPIPAVAWIPLAI 125 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + G + +L N + G A A S +R +I Sbjct: 126 LMFPSSEAS----MVFITFIGALFPVLLNTVHGVEAVDARLVASARSLGAGRLAVFREVI 181 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPG P VTG G AW + +E+ S G+G Y S ++ ++V+G Sbjct: 182 LPGALPSVVTGLAIGMGTAWFCLVTAEMISG------QFGIGYYTWMSYTIQNYADIVVG 235 Query: 559 VLIMCCFVLALNRFLWH 575 +L + + + + Sbjct: 236 MLFIGVLGMGSSALVRR 252 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 89/223 (39%), Gaps = 14/223 (6%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 Q PR++ + + + Q+ S + R+ ++ + ++R Sbjct: 44 FQNVPPPREVAESAWSLVQSPLVLQHLSASLRRVFIGFGLAAIAGVALGLAIGRARWAED 103 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L+P L++++ IP + ++ ++ F +E + +F F ++ + + + Sbjct: 104 TLLPPLEVLRPIPAVAWIPLAILMF--------PSSEASMVFITFIGALFPVLLNTVHGV 155 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + L +RS F + +P ++P +V + + M WF +V +EMI Sbjct: 156 EAVDARLVASARSLGAGRLAVFREVILPGALPSVVTGLAIGMGTAWFCLVTAEMISG--- 212 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GIG Y ++ Q+ I+ ML + + L+ R Sbjct: 213 ---QFGIGYYTWMSYTIQNYADIVVGMLFIGVLGMGSSALVRR 252 >gi|319763463|ref|YP_004127400.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gi|330824290|ref|YP_004387593.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317118024|gb|ADV00513.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gi|329309662|gb|AEB84077.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 279 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 105/281 (37%), Gaps = 15/281 (5%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +P ++ R G+ ++ + + W G + + + Sbjct: 8 APALGRQERRPRRRGLAPLEPVSARTRVALGVGFFVLFFVVWAFFTLGGFVSPTFLASPI 67 Query: 367 IVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + + +L +T++RV+ ++A+++ +P+GI +G + + ++PF Sbjct: 68 TMAREGWLLFTEFGFLHDIGMTVWRVLGGFVMAAVVAVPLGIAMGAHKGVEAFLEPFVSF 127 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 PA+ F PL++ L L++ G+ + I+ V D E A Sbjct: 128 CRYLPASAFIPLLILWAGLGELQK----LLVIFIGSVFQIILMVAVTVGNARKDLVEAAY 183 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + + R +++PG P G AW IV+E+ +G+G I Sbjct: 184 TLGASSSGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIG------SASGIGHMIT 237 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGT 582 +S + +++ G++++ L + L+ + Sbjct: 238 DSQALLNTGQIIFGIIVIGLIGLVSDVLFKAVNRRLFAWSA 278 Score = 95.4 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 81/229 (35%), Gaps = 17/229 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + T R+L V++ + + + L Sbjct: 63 LASPITMAREGWLLFTEFGFLHDIGMTVWRVLGGFVMAAVVAVPLGIAMGAHKGVEAFLE 122 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + + +P F+ +++ EL + IF V+ + + ++ N Sbjct: 123 PFVSFCRYLPASAFIPLLILWAGLG--------ELQKLLVIFIGSVFQIILMVAVTVGNA 174 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +DL E + + S + +P + P + + + + W +V+ +E+I Sbjct: 175 RKDLVEAAYTLGASSSGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIGSAS---- 230 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267 GIG I + + I++ ++ + + + D L + R + WS Sbjct: 231 --GIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDVLFKAVNRRLFAWS 277 >gi|330874200|gb|EGH08349.1| taurine ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 285 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 92/276 (33%), Gaps = 21/276 (7%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 P + + T + + ++ +F + G + GY+ Sbjct: 23 PAARRPRVYPSTRTISALTLVTLLALWWAVTAGGWIEPLFLPPPADVLGKGWLLMTKGYM 82 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + ++ R+ + + A++ IPVGI IG P + Sbjct: 83 DSTLWQH--------LGASLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYRP 134 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P + PL+V + LL+ I G A S Sbjct: 135 IPPLAYLPLIVIWFGIGEFSK----VLLIYLAIFAPIAIATATGVRTVDPTRVRAAQSLG 190 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 T W+ R++I+P P +TG G W+ + +E+ + T+GLG + + Sbjct: 191 ATRWQLIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAA 244 Query: 548 EKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + VVLG+L++ A+ R L L + Sbjct: 245 QFLVTDVVVLGILVIAIIAFAMELGLRALQRKLVPW 280 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ + L ++R V P+++ + IP L +L Sbjct: 84 STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGVFDPLIEFYRPIPPLAYLPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTRVRAAQSLGATRWQ 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 249 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281 >gi|71733936|ref|YP_274863.1| ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554489|gb|AAZ33700.1| ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 268 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + VL+ I+ I + P +IV + L +L ++ S + LR+LS VI Sbjct: 25 VIIVLLEIIVRIGWLPSYQMPAPSEIVLTLR-DLADGALWKHISASLLRVLSGFVIGASL 83 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V+A SR L P ++SIP L ++ +++ E + I I Sbjct: 84 ALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG--------ETSKIVLI 135 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + ++ I R L EV + + S ++ + +P ++PGL + MS Sbjct: 136 AIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 195 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 196 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 249 Query: 261 -RPMIVWSNKFRLERTTGI 278 + + W + F + G Sbjct: 250 EKRFLAWRDTFTGQSREGR 268 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ +I + + + W+G + ++P L + P+ + PL++ + Sbjct: 68 ASLLRVLSGFVIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIG 127 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + + +R R I+LP P Sbjct: 128 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGFSRYRLTRRILLPAALP 183 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + +W + +E+ + T GLG +++ E V+ ++++ Sbjct: 184 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLAT 237 Query: 565 FVLALNRFL 573 + L Sbjct: 238 LGKLSDGLL 246 >gi|49482416|ref|YP_039640.1| ABC transporter permease [Staphylococcus aureus subsp. aureus MRSA252] gi|221140719|ref|ZP_03565212.1| putative transport system permease [Staphylococcus aureus subsp. aureus str. JKD6009] gi|257424312|ref|ZP_05600741.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257426989|ref|ZP_05603391.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus subsp. aureus 65-1322] gi|257429626|ref|ZP_05606013.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257432273|ref|ZP_05608636.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257435232|ref|ZP_05611283.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282902764|ref|ZP_06310657.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus C160] gi|282907166|ref|ZP_06315014.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus Btn1260] gi|282907508|ref|ZP_06315350.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912411|ref|ZP_06320207.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp. aureus WBG10049] gi|282913030|ref|ZP_06320822.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M899] gi|282915503|ref|ZP_06323275.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus D139] gi|282921446|ref|ZP_06329164.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus C427] gi|282922657|ref|ZP_06330347.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus C101] gi|283767915|ref|ZP_06340830.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus H19] gi|283959621|ref|ZP_06377062.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293498084|ref|ZP_06665938.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus 58-424] gi|293511673|ref|ZP_06670367.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus M809] gi|293550283|ref|ZP_06672955.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M1015] gi|295426719|ref|ZP_06819358.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589080|ref|ZP_06947721.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|304380137|ref|ZP_07362857.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|49240545|emb|CAG39202.1| putative transport system permease [Staphylococcus aureus subsp. aureus MRSA252] gi|257273330|gb|EEV05432.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257276620|gb|EEV08071.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus subsp. aureus 65-1322] gi|257280107|gb|EEV10694.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257283152|gb|EEV13284.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257285828|gb|EEV15944.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|269939700|emb|CBI48068.1| putative transport system permease [Staphylococcus aureus subsp. aureus TW20] gi|282314878|gb|EFB45264.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus C101] gi|282315861|gb|EFB46245.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus C427] gi|282320606|gb|EFB50944.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus D139] gi|282323130|gb|EFB53449.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M899] gi|282324107|gb|EFB54423.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp. aureus WBG10049] gi|282328413|gb|EFB58684.1| nitrate ABC transporter, permease [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330065|gb|EFB59586.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus Btn1260] gi|282597223|gb|EFC02182.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus C160] gi|283461794|gb|EFC08878.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus H19] gi|283469415|emb|CAQ48626.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ST398] gi|283789213|gb|EFC28040.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290919330|gb|EFD96406.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M1015] gi|291097015|gb|EFE27273.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus 58-424] gi|291465631|gb|EFF08163.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus M809] gi|295129171|gb|EFG58798.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577591|gb|EFH96304.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|302750054|gb|ADL64231.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341118|gb|EFM07037.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436716|gb|ADQ75787.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH60] gi|315194629|gb|EFU25018.1| putative transport system permease [Staphylococcus aureus subsp. aureus CGS00] gi|329312871|gb|AEB87284.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus T0131] Length = 253 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + + + Q+ + + R ++ V++LL L ++R L + Sbjct: 37 LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIE 96 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ +++ I + + F V++F L AI IF + + + F+ + + +I Sbjct: 97 PLFQLIRPISPIAWAPFVVLWFGIG--------SLPAIAIIFIAAFFPIVFNTIKGVRDI 148 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +++ + L+GW + + P + ++ + M++ W F+V+ EMI Sbjct: 149 EPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A +L +L A+ + F+ D+ + Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240 >gi|209516010|ref|ZP_03264870.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia sp. H160] gi|209503470|gb|EEA03466.1| ABC nitrate/sulfonate/bicarbonate family transporter, fused inner membrane subunits [Burkholderia sp. H160] Length = 148 Score = 133 bits (336), Expect = 5e-29, Method: Composition-based stats. Identities = 78/132 (59%), Positives = 102/132 (77%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ PN +D +AF L+I +I + G ET P + I+LD +LP+YA RTTLRML Sbjct: 17 RVLPNRWDFVAFPLIICLIAMASIGFHETLAPMSTLKTQAISLDPANLPEYAMRTTLRML 76 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +AMV SL+FT Y TLAAKSRR G+VLVPILDI+QS+P+LG+++FTV +F+ L+PG+V+G Sbjct: 77 AAMVASLIFTLSYGTLAAKSRRAGLVLVPILDILQSVPVLGYISFTVTFFLALFPGRVLG 136 Query: 134 AELAAIFAIFTS 145 AELAAIFAIFTS Sbjct: 137 AELAAIFAIFTS 148 >gi|254562523|ref|YP_003069618.1| ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|254269801|emb|CAX25774.1| ABC superfamily transporter membrane protein [Methylobacterium extorquens DM4] Length = 291 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV+ + A + + +G+ IG + P ++L PA + PL + Sbjct: 95 GASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLRPIPAVAWIPLAILMFP- 153 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + ++ + G + IL N + G + A S R +ILPG Sbjct: 154 ---SSEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAA 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P VTGA G AW + +E+ S + G+G + ES ++ ++V+G+L++ Sbjct: 211 PSIVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWESYTLQNYDDIVVGMLLIG 264 Query: 564 CFVLA 568 + Sbjct: 265 LLGMG 269 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 14/222 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ L + P + +LP + + R+LS + +L Sbjct: 61 LDLGLVTFRNVPTPAAAAQAAWALVHAPALPTHLGASLARVLSGFLAALGVGVALGLAIG 120 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +SR +L+P L++++ IP + ++ ++ F +E++ F FT ++ + Sbjct: 121 RSRLARDLLLPPLEVLRPIPAVAWIPLAILMF--------PSSEVSMAFITFTGALFPIL 172 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ L +RS + +P + P +V + M WF +V +E Sbjct: 173 LNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPSIVTGAAIGMGTAWFCLVTAE 232 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 MI GIG + + Q+ I+ ML + + Sbjct: 233 MISG------QYGIGYFTWESYTLQNYDDIVVGMLLIGLLGM 268 >gi|317406801|gb|EFV86921.1| binding-protein-dependent transport system inner membrane component [Achromobacter xylosoxidans C54] Length = 205 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ RV V + +A I +P+G+ IG + + + P Q L + P+ V Sbjct: 17 LVSLRRVAVGLGLALAIGVPLGLAIGSYRRLEAALSPAMQFLRMISPLSWMPIAVMVFGV 76 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+ F W I N AG + ++A S T W R++ILPG+ Sbjct: 77 GDD----PVYFLLAFAAVWPIALNTAAGVQQLDARWLQLAQSMAATRWETLRHVILPGVL 132 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + +TG A G W + E+ + G+G +I ++ ++ ++ E++ VL++ Sbjct: 133 GHILTGVRLAIGILWIVLVPCEMLG------VSAGMGYFILDTRDRLAYSELMAMVLLIG 186 Query: 564 CFVLALNRFLWHPLYLY 580 AL+ LY Y Sbjct: 187 ALGFALDAAA-RALYRY 202 Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 75/201 (37%), Gaps = 14/201 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L LP + + R+ + ++L RRL L P + ++ I L + Sbjct: 7 LTGSDLPLHVLVSLRRVAVGLGLALAIGVPLGLAIGSYRRLEAALSPAMQFLRMISPLSW 66 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + V+ F + F + + VW + + + + ++++S + Sbjct: 67 MPIAVMVFGVG--------DDPVYFLLAFAAVWPIALNTAAGVQQLDARWLQLAQSMAAT 118 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 W+ ++ +P + ++ + +++ W +V EM+ V G+G +I Sbjct: 119 RWETLRHVILPGVLGHILTGVRLAIGILWIVLVPCEMLGVSA------GMGYFILDTRDR 172 Query: 236 QDLLAILYAMLTMLGVIFLYD 256 ++ +L + + F D Sbjct: 173 LAYSELMAMVLLIGALGFALD 193 >gi|190894928|ref|YP_001985221.1| putative glycine betaine/L-proline ABC transporter permease [Rhizobium etli CIAT 652] gi|190700589|gb|ACE94671.1| probable glycine betaine/L-proline ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 295 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 + RT + V+S+ L A+S RL ++ PILD+MQ++P +L V Sbjct: 96 MWDDTMRTVSMIFVCTVLSIAIGIPIGILMARSDRLQRIVNPILDVMQTMPSFVYLIPVV 155 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + GKV G I+AI M + + +D+ E + +F S QK Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTDLGIRLVDKDVLEAADAFGTSRSQKL 207 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P ++ + ++ VV + MI V G+G + AI Q Sbjct: 208 FKVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260 Query: 241 ILYAMLTMLGVIFLYDQL 258 ++ L ++G+ ++D++ Sbjct: 261 GIFNGLAIVGIAIIFDRV 278 Score = 84.6 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 87/280 (31%), Gaps = 18/280 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 N + I F + ++ L L Q + +L I WF Sbjct: 16 RNLKKAIDDGFRGFTRSYGDGIESLFVPLQHFLIAAERFMTQTPWPIITAIILAIAWFGS 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + ++ I + D + T+ + V +++ I IP+GI + Sbjct: 76 RSLKVVAGCLVTLMLIGYFDMWDDTMR-------TVSMIFVCTVLSIAIGIPIGILMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + + P ++ P+ V+ VV + + + ++ ++ G Sbjct: 129 DRLQRIVNPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A +F + + + LP P + G A +++ + Sbjct: 185 IRLVDKDVLEAADAFGTSRSQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|254303132|ref|ZP_04970490.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323324|gb|EDK88574.1| possible nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 250 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 83/189 (43%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+ ++S+ I +GI++G I Q + P + PL++ Sbjct: 59 LSLRRVLGGFFLSSVFGILLGIFMGISQKIKEFFQLTLTAIRQIPMIAWIPLIILWAGIG 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ ++++F + I+ N ++G + + EVA + ++ + + LP P Sbjct: 119 EISK----IVVILFAATFPIVVNTMSGVDSTSETYLEVAKMYGLSKKETFFKVYLPSALP 174 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG +W A + SE+ + ++G+G + ++ V++ ++++ Sbjct: 175 NIFTGLRLGLSSSWMAVVASELIA------SSSGIGYRLNDARSLMKSDVVIVCMIVIGL 228 Query: 565 FVLALNRFL 573 L +++ + Sbjct: 229 IGLLMDKLI 237 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 83/201 (41%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L S + R+L +S +F + S+++ L ++ IP++ ++ Sbjct: 51 GQLYNDLSLSLRRVLGGFFLSSVFGILLGIFMGISQKIKEFFQLTLTAIRQIPMIAWIPL 110 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++ E++ I I + + + + + + EV++ + LS + Sbjct: 111 IILWAGIG--------EISKIVVILFAATFPIVVNTMSGVDSTSETYLEVAKMYGLSKKE 162 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F+ + +P ++P + + + +S W VVASE+I GIG + A Sbjct: 163 TFFKVYLPSALPNIFTGLRLGLSSSWMAVVASELIASSS------GIGYRLNDARSLMKS 216 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ M+ + + L D+L+ Sbjct: 217 DVVIVCMIVIGLIGLLMDKLI 237 >gi|94311790|ref|YP_585000.1| binding-protein-dependent transport systems inner membrane component [Cupriavidus metallidurans CH34] gi|93355642|gb|ABF09731.1| taurine ABC-type transporter, permease component: TauT family [Cupriavidus metallidurans CH34] Length = 291 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 102/260 (39%), Gaps = 20/260 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDI---FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 R P + + R ++L + F V VA + S ++ + T Sbjct: 25 PARRARHPWMSPLVPVSPRARWLLGMSFFVAFFAVWAVATLGGFVSRTFLADPLTMAHEG 84 Query: 378 -------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 I +T++RVV ++A+++ +P+GI++G + +PF PA Sbjct: 85 WRLFTQYGFIGDIGMTVWRVVGGFVLAALLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPA 144 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + F PL++ L++ G+ + I+ V D E A + T Sbjct: 145 SAFIPLLILWAGIGETQK----LLVIFIGSFFQIVLMVAVTVGGARKDLVEAAYTLGATP 200 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 R +++PG P G AW IV+E+ ++G+G I +S Sbjct: 201 RGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALL 254 Query: 551 SFPEVVLGVLIMCCFVLALN 570 + +++ G++++ C L + Sbjct: 255 NTGQIIFGIIVIGCIGLVSD 274 Score = 95.4 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 79/239 (33%), Gaps = 15/239 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +AF V + + + P + + T R++ V++ Sbjct: 53 FVAFFAVWAVATLGGFVSRTFLADPLTMAHEGWRLFTQYGFIGDIGMTVWRVVGGFVLAA 112 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L + P + + +P F+ +++ K++ Sbjct: 113 LLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLL-------- 164 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + ++ +DL E + + + + +P + P + + + + Sbjct: 165 VIFIGSFFQIVLMVAVTVGGARKDLVEAAYTLGATPRGIVRRVLIPGAAPDIAETLRLVL 224 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W +V+ +E+I GIG I + + I++ ++ + + + D + Sbjct: 225 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGCIGLVSDLVF 277 >gi|294501451|ref|YP_003565151.1| aliphatic sulfonates ABC transporter permease SsuC [Bacillus megaterium QM B1551] gi|294351388|gb|ADE71717.1| aliphatic sulfonates ABC transporter, permease protein SsuC [Bacillus megaterium QM B1551] Length = 284 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 102/256 (39%), Gaps = 18/256 (7%) Query: 23 LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L ++V II + + P DIV + L + LR + Sbjct: 43 LLLIVVWQIIGSAGYVSKTVLPTPVDIVLSFKQLIVSGELGANLQISILRAAIGFAVGAG 102 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 ++ + S++ + P + +++++P L +++F E++ I Sbjct: 103 LGLLFGVIVGFSKKTEHYMDPSIQMLRTVPHLALAPLFILWFG--------FGEISKILL 154 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + Y + + L +V+R + S W++ L +P ++P ++ + +S+ Sbjct: 155 IANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALPNILLGVRLSLG 214 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W +V +E++ + G+G I A + + ++ V L D ++ Sbjct: 215 IAWLGLVVAELMGASE------GVGYMIMDARQFSQTDVVFVGIIIFAVVGKLTDSFVRV 268 Query: 259 LFRPMIVWSNKFRLER 274 L + ++ W + + E+ Sbjct: 269 LEKRLLKWRDSYAGEK 284 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ R + + + + + G+ +GF + P Q+L P PL + + Sbjct: 88 ISILRAAIGFAVGAGLGLLFGVIVGFSKKTEHYMDPSIQMLRTVPHLALAPLFILWFGFG 147 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ LL+ G + I N G + +VA + W+ +ILP P Sbjct: 148 EISK----ILLIANGAFFPIYVNTYLGIRGVDSKLFDVARVLQFSKWKQITKLILPAALP 203 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G AW +V+E+ + G+G I ++ + V +G++I Sbjct: 204 NILLGVRLSLGIAWLGLVVAELMG------ASEGVGYMIMDARQFSQTDVVFVGIIIFAV 257 Query: 565 FVLALNRFL 573 + F+ Sbjct: 258 VGKLTDSFV 266 >gi|302556764|ref|ZP_07309106.1| taurine ABC transporter, permease [Streptomyces griseoflavus Tu4000] gi|302474382|gb|EFL37475.1| taurine ABC transporter, permease [Streptomyces griseoflavus Tu4000] Length = 289 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 17/264 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P RR P + ++ L I + L + P ++V ++ +L + + Sbjct: 39 PGTGRRGLPLALNAVSVALGIALWWALASAGFKLPTPPEVVSRAGTLIEDGTLGEDVLAS 98 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L + L ++ P + +++P L + VV Sbjct: 99 LTRVLIGFALGTAAAVPVGFLMGWYGIARGLMEPWIQFFRTVPPLAIIPLAVVVMGIDET 158 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K IF IF + S +Q + N+ R L +R F + VP S Sbjct: 159 PK--------IFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDAVIFARVVVPAS 210 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 P ++ M + + W +VA+E+I G+G + A DL I ++++ Sbjct: 211 TPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLISI 264 Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269 + L D++L R + W + Sbjct: 265 GILGLLMDRILLLAERKLTGWQER 288 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 86/267 (32%), Gaps = 21/267 (7%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--------TYQDVLYVI 380 + + R L + V G+A+ A S G+ + T + + Sbjct: 33 KTAAERPGTGRRGLPLALNAVSVALGIALWWALASAGFKLPTPPEVVSRAGTLIEDGTLG 92 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ RV++ + + +PVG +G+ ++P+ Q P PL V Sbjct: 93 EDVLASLTRVLIGFALGTAAAVPVGFLMGWYGIARGLMEPWIQFFRTVPPLAIIPLAVVV 152 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + ++ + + G A + +++P Sbjct: 153 MGI----DETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAKDAVIFARVVVP 208 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P+ + G G AW + +E+ + GLG + + P + +G++ Sbjct: 209 ASTPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLI 262 Query: 561 IMCCFVLALNRFLW---HPLYLYGTRC 584 + L ++R L L + R Sbjct: 263 SIGILGLLMDRILLLAERKLTGWQERR 289 >gi|169629549|ref|YP_001703198.1| putative sulfonate ABC transporter, permease [Mycobacterium abscessus ATCC 19977] gi|169241516|emb|CAM62544.1| Putative sulfonate ABC transporter, permease [Mycobacterium abscessus] Length = 274 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 98/262 (37%), Gaps = 27/262 (10%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH--------------- 370 P + + +L W + A W +++ Sbjct: 6 RAPRAVPVGTVAAQKALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAPDKAFR 65 Query: 371 --FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + ++ I+++R+++ + +A++I +P G+ +G +P Q L Sbjct: 66 AAMDLLNRGVLLQDAGISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMI 125 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 + P+ V+ N + L+ W IL N AG + + VA SFH Sbjct: 126 SPLSWTPIAVAVFGIG----NQPVVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFHA 181 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 T +ILP I + TG A G AW + +E+ +GLG + + + Sbjct: 182 TRSEVLTAVILPAIRGHIQTGIRVALGVAWVVLVPAEMLG------VRSGLGYQVLNARD 235 Query: 549 KGSFPEVVLGVLIMCCFVLALN 570 + ++ +VV +L++ AL+ Sbjct: 236 QLAYDQVVAVILVIGILGYALD 257 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 99/267 (37%), Gaps = 20/267 (7%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILL---HGIQETTVPRDIVDIVPITLDVHSLPQYA 65 + RI+P + A V V + + +L + + T P L+ L Q A Sbjct: 21 ALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAPDKAFRAAMDLLNRGVLLQDA 80 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + R+L + ++ + L S P++ ++ I L + V F Sbjct: 81 GISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTPIAVAVFGI 140 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 +F I T+ VW + + + +I V+RSF + + + + Sbjct: 141 GNQP--------VVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFHATRSEVLTAVIL 192 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P + + +++ W +V +EM+ V G+G + A + ++ + Sbjct: 193 PAIRGHIQTGIRVALGVAWVVLVPAEMLGV------RSGLGYQVLNARDQLAYDQVVAVI 246 Query: 246 LTMLGVIFLYDQLLFRPMIVWSNKFRL 272 L + + + D R + +++FR+ Sbjct: 247 LVIGILGYALDMAAKRLL---ASRFRV 270 >gi|325959393|ref|YP_004290859.1| ABC transporter integral membrane subunit [Methanobacterium sp. AL-21] gi|325330825|gb|ADZ09887.1| ABC-type transporter, integral membrane subunit [Methanobacterium sp. AL-21] Length = 245 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 10/190 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ RV++ I+A+I+ +P+GI IG+ + + + +L P + P + Sbjct: 59 TLSRVILGFIVAAIVAVPLGILIGWSETVENYLSFIIGILRPIPPIAWIPFAILWFGLGL 118 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ G+ + IL + G + E A + + + ++ P P Sbjct: 119 GS----AIFIIFVGSVFPILISTADGVKRIDKVYIESAYTLGADKLQTIKKVVFPAALPN 174 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG G A ++ +E+ GLG I +T ++G+L + Sbjct: 175 IITGLKVGMGIALMCTVAAEMIG------SNNGLGYLILTATSMLDSASAIVGMLAIGVI 228 Query: 566 VLALNRFLWH 575 L Sbjct: 229 GLTFEYIFTR 238 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 85/219 (38%), Gaps = 14/219 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P D+ + L +L Q T R++ +++ + L S + L Sbjct: 34 PSPHDVFEAFKSLLMNGTLIQDTIDTLSRVILGFIVAAIVAVPLGILIGWSETVENYLSF 93 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 I+ I++ IP + ++ F +++F +AIF IF V+ + S + I Sbjct: 94 IIGILRPIPPIAWIPFAILWFGLGLG--------SAIFIIFVGSVFPILISTADGVKRID 145 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 + E + + Q + P ++P ++ + + M VA+EMI + Sbjct: 146 KVYIESAYTLGADKLQTIKKVVFPAALPNIITGLKVGMGIALMCTVAAEMIGSNN----- 200 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G I A D + + ML + + ++ + R Sbjct: 201 -GLGYLILTATSMLDSASAIVGMLAIGVIGLTFEYIFTR 238 >gi|163746321|ref|ZP_02153679.1| taurine ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161380206|gb|EDQ04617.1| taurine ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 421 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 73/192 (38%), Gaps = 10/192 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRVVV + +++ IP+G +G P + + P PLV+ Sbjct: 228 GYSLFRVVVGFALGALVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 287 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+ W + +G S A S + + R++I+P Sbjct: 288 GEVGK----IILLFLAALWIMAIAARSGVSGVNISKVHAAYSLGASKAQIMRHVIVPNSL 343 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TGA A G W + +E+ + G G I +++ V++G++++ Sbjct: 344 PEIFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASKFQLTDIVLMGIILIG 397 Query: 564 CFVLALNRFLWH 575 ++ + Sbjct: 398 VIGFGIDMLMRK 409 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 84/225 (37%), Gaps = 17/225 (7%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 + +I +L ++ + R++ + L S PI++ M Sbjct: 210 LGEISSQGYRDSTLWEHLGYSLFRVVVGFALGALVGIPLGYAMGLSGWFRGWFDPIVEFM 269 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + +P L + +++ GK I +F + +W M + + + Sbjct: 270 RPVPPLALIPLVIIWAGIGEVGK--------IILLFLAALWIMAIAARSGVSGVNISKVH 321 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 + S S Q ++ VP S+P + ++M W VVA+E++ G G Sbjct: 322 AAYSLGASKAQIMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGM 375 Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 I +A K Q +L ++ + + F D L+ R ++ W + Sbjct: 376 MIMVASKFQLTDIVLMGIILIGVIGFGIDMLMRKAERVLVPWKGR 420 >gi|116749648|ref|YP_846335.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] gi|116698712|gb|ABK17900.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] Length = 290 Score = 133 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 19/203 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV++ AS I IP+G+ +G+ + P +L + P + PL + + Sbjct: 97 SLFRVLLGFCTASAIAIPLGLTMGWNRIVRDLTMPGFELFRSVPPVAWVPLSIIIFA--- 153 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + G + + N GA + A + +R+I+LPG P Sbjct: 154 -QMEYSIVFITFTGAFFVVALNAKLGAESIDQSLFRAAWCLGANPRQVFRHILLPGSLPS 212 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G G AW + +E+ + + GLG ES FPEV+L + + Sbjct: 213 IFMGLALGMGIAWQTVVAAEMIAGQY------GLGYLAWESYSLIRFPEVILAMASIGVL 266 Query: 566 VLALNRFL---------WHPLYL 579 + L W +Y Sbjct: 267 GYVCSAILRGIANKYLAWRKVYT 289 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 76/193 (39%), Gaps = 14/193 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+L + +R + + +P ++ +S+P + ++ +++ F + Sbjct: 96 HSLFRVLLGFCTASAIAIPLGLTMGWNRIVRDLTMPGFELFRSVPPVAWVPLSIIIFAQM 155 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 E + +F FT + + + +I + L + + Q F ++ +P Sbjct: 156 --------EYSIVFITFTGAFFVVALNAKLGAESIDQSLFRAAWCLGANPRQVFRHILLP 207 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 S+P + + + M W VVA+EMI G+G + ++ AM Sbjct: 208 GSLPSIFMGLALGMGIAWQTVVAAEMIAG------QYGLGYLAWESYSLIRFPEVILAMA 261 Query: 247 TMLGVIFLYDQLL 259 ++ + ++ +L Sbjct: 262 SIGVLGYVCSAIL 274 >gi|224827319|ref|ZP_03700410.1| binding-protein-dependent transport systems inner membrane component [Lutiella nitroferrum 2002] gi|224600467|gb|EEG06659.1| binding-protein-dependent transport systems inner membrane component [Lutiella nitroferrum 2002] Length = 308 Score = 133 bits (336), Expect = 7e-29, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV +A + IP+G+ +G P + P + P+V+ Sbjct: 117 SLYRVFGAFALACVTAIPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPMVIIWFGIGE 176 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L+ + + +G + + A S + + R++IL P Sbjct: 177 FSK----VYLIFLAIFAPMAISARSGVRSVSIEQIHAAYSMGASRMQVIRHVILKSALPE 232 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG G W + E+ + T GLG + + E + V++GV+++ F Sbjct: 233 IFTGMRIGIGVGWTTLVAGEMVA------STRGLGFMVLNAAEFLASDVVIMGVIVIGLF 286 Query: 566 VLALNRFL 573 + + Sbjct: 287 AFTFDLLM 294 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 84/218 (38%), Gaps = 17/218 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 +L ++ + R+ A ++ + L SR V P ++ + +P L Sbjct: 104 GFANATLLEHTETSLYRVFGAFALACVTAIPIGVLMGVSRVARGVFDPPIEFYRPLPPLA 163 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L +++F E + ++ IF + M S + ++ + + S Sbjct: 164 YLPMVIIWFGIG--------EFSKVYLIFLAIFAPMAISARSGVRSVSIEQIHAAYSMGA 215 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 S Q ++ + ++P + M + + GW +VA EM+ G+G + A + Sbjct: 216 SRMQVIRHVILKSALPEIFTGMRIGIGVGWTTLVAGEMVA------STRGLGFMVLNAAE 269 Query: 235 EQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269 ++ ++ + F +D L L R ++ W K Sbjct: 270 FLASDVVIMGVIVIGLFAFTFDLLMRYLERVLVPWKGK 307 >gi|51245216|ref|YP_065100.1| ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50876253|emb|CAG36093.1| probable ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 279 Score = 133 bits (336), Expect = 7e-29, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 81/224 (36%), Gaps = 21/224 (9%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + +I I++ RV++ +A++I IP+G+ +G+ F + Sbjct: 47 HPTLDLLSMGSLIANVLISLVRVIMGYALAALIAIPLGVIMGYSQLTYKFFNGFLNIFRP 106 Query: 428 FPANVFFPLVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFNVIAG 471 P + PLV++ L N + ++ G + IL + I G Sbjct: 107 IPPLAWVPLVIAWFGIASLATLVGAETGKTFIYLNNIKFSMLFIIFIGAFYPILTSTIHG 166 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 + A + + ++ I++P P +TG G AW + +E+ Sbjct: 167 VRNVNVTLIDSARVLGASERQIFQKILIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-- 224 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 +G+G I + S V+ G++ + ++ H Sbjct: 225 ---SLSGVGYLITHAFTLASTDIVIAGMISIGFVGALMDIIFRH 265 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 17/216 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L + SL + +R++ ++ L + S+ L+I + IP L + Sbjct: 53 LSMGSLIANVLISLVRVIMGYALAALIAIPLGVIMGYSQLTYKFFNGFLNIFRPIPPLAW 112 Query: 116 LTFTVVYFMNLYPGKVIGAELAA------------IFAIFTSQVWNMTFSMYQSLCNIPR 163 + + +F ++GAE +F IF + + S + N+ Sbjct: 113 VPLVIAWFGIASLATLVGAETGKTFIYLNNIKFSMLFIIFIGAFYPILTSTIHGVRNVNV 172 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L + +R S Q F + +P +MP ++ M + + W +V++EM+ L Sbjct: 173 TLIDSARVLGASERQIFQKILIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-----SLS 227 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A ++ M+++ V L D + Sbjct: 228 GVGYLITHAFTLASTDIVIAGMISIGFVGALMDIIF 263 >gi|253730527|ref|ZP_04864692.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725667|gb|EES94396.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 253 Score = 133 bits (336), Expect = 7e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVGGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 104/251 (41%), Gaps = 15/251 (5%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRT 68 + + I + F+ + ++ I+ H P + + + + Q+ + + Sbjct: 4 PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAIS 63 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R + V++LL L ++R L + P+ +++ I + + F V++F Sbjct: 64 LWRFVGGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 L AI IF + + + F+ + + +I +++ + L+GW + + P + Sbjct: 122 ------SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRNILFPGA 175 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 ++ + M++ W F+V+ EMI G+G I A +L +L A+ + Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229 Query: 249 LGVIFLYDQLL 259 F+ D+ + Sbjct: 230 GLFGFIIDRFI 240 >gi|255283058|ref|ZP_05347613.1| taurine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] gi|255266360|gb|EET59565.1| taurine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] Length = 267 Score = 133 bits (336), Expect = 7e-29, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 13/225 (5%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +I + ++ ++++RV V A+++ I +GI +G+ + +P Sbjct: 51 LMAFIRSFTEPIGKQTMLVHIGVSLYRVAVAFFFATVVGISLGIAMGYSRLAEAIFKPIF 110 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + + P + PL + + ++ G +I N GA + Sbjct: 111 EFIRPIPPLAWIPLSILWFGLSDVGK----FFIIFLGCFSFITVNTYDGAKNVDPELIGA 166 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A + + I+LP PY G A W+A + +E+ G+G Sbjct: 167 ARMLGANERQIFFRIVLPSAVPYIFAGLQIAVTAGWSAVVGAEMIQ------SNEGVGWV 220 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF---LWHPLYLYGTRC 584 I G+ ++++G++ + L L L + + Sbjct: 221 IVRGMNTGNTVQIMVGIMAIGIVGFILANLTSALERRLCAWNEQK 265 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 99/257 (38%), Gaps = 21/257 (8%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLS 74 + LL+ ++V + ++ + ++ + + R+ Sbjct: 21 VISLLSLLVVWELAARFTGASMFLPPASQVLMAFIRSFTEPIGKQTMLVHIGVSLYRVAV 80 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A + + SR + PI + ++ IP L ++ ++++F GK Sbjct: 81 AFFFATVVGISLGIAMGYSRLAEAIFKPIFEFIRPIPPLAWIPLSILWFGLSDVGK---- 136 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 F IF +T + Y N+ +L +R + Q F+ + +P ++P + Sbjct: 137 ----FFIIFLGCFSFITVNTYDGAKNVDPELIGAARMLGANERQIFFRIVLPSAVPYIFA 192 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++++ GW VV +EMI + G+G I + + + I+ ++ + V F+ Sbjct: 193 GLQIAVTAGWSAVVGAEMIQSNE------GVGWVIVRGMNTGNTVQIMVGIMAIGIVGFI 246 Query: 255 YDQL---LFRPMIVWSN 268 L L R + W+ Sbjct: 247 LANLTSALERRLCAWNE 263 >gi|329732605|gb|EGG68955.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21193] Length = 253 Score = 133 bits (335), Expect = 7e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 106 bits (265), Expect = 9e-21, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 105/251 (41%), Gaps = 15/251 (5%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRT 68 + + I + F+ + ++ I+ H P + + + + Q+ + + Sbjct: 4 PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAIS 63 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R ++ V++LL L ++R L + P+ +++ I + + F V++F Sbjct: 64 LWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 L AI IF + + + F+ + + +I +++ + L+GW + + P + Sbjct: 122 ------SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIATNLNLTGWSLYRNILFPGA 175 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 ++ + M++ W F+V+ EMI G+G I A +L +L A+ + Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229 Query: 249 LGVIFLYDQLL 259 F+ D+ + Sbjct: 230 GLFGFIIDRFI 240 >gi|126641766|ref|YP_001084750.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Acinetobacter baumannii ATCC 17978] Length = 225 Score = 133 bits (335), Expect = 7e-29, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 86/210 (40%), Gaps = 10/210 (4%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 + I + + + ++FRVVV ++A++I + +G+ G +++ + P + Sbjct: 10 LDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLE 69 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 +L PA + PL + + + + G + IL N + G A A Sbjct: 70 VLRPIPAVAWIPLAILIFPSSEAS----MIFITFIGALFPILLNTVHGVGAVDPRLVASA 125 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 S + +I+PG P +TG G W + +E+ S G+G + Sbjct: 126 KSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG------QHGIGYFT 179 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 ES ++ +V+G++++ + + + Sbjct: 180 WESFTLQNYSNIVVGMVLIGALGMFSSTLV 209 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 91/222 (40%), Gaps = 14/222 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 P D++ + + + ++ + R++ V++ L LA + ++L Sbjct: 2 NFSNVPTPLDVIHALWAFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLA 61 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 L+P L++++ IP + ++ ++ F +E + IF F ++ + + Sbjct: 62 AFLMPPLEVLRPIPAVAWIPLAILIF--------PSSEASMIFITFIGALFPILLNTVHG 113 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + + L ++S S + + +P ++P ++ + + M WF +V +EMI Sbjct: 114 VGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISG-- 171 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG + + Q+ I+ M+ + + L+ Sbjct: 172 ----QHGIGYFTWESFTLQNYSNIVVGMVLIGALGMFSSTLV 209 >gi|91762075|ref|ZP_01264040.1| probable taurine uptake ABC transporter permease protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717877|gb|EAS84527.1| probable taurine uptake ABC transporter permease protein [Candidatus Pelagibacter ubique HTCC1002] Length = 637 Score = 133 bits (335), Expect = 7e-29, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 10/214 (4%) Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + + + F + + + RV++ +++ I +P+G+++G P Sbjct: 422 KVLSVVTGEFKLFKIPVPMGHIWDSFLRVLLGLVLGIIFGVPLGLFMGLNRFAKGFFDPL 481 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 +L P + PLV++ N+ L+ + ++ + AGA+ Sbjct: 482 IELYRPVPPLAWAPLVITVFGI----DNVGKVFLLFMVSFSIMIISARAGAAGTQLSKIH 537 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 + S + W+ R++I P P +TG A G W + +E + TTG+G Sbjct: 538 ASHSLGASKWQILRHVIFPNSLPEILTGVRVAVGMCWGTLVAAEFLAG------TTGIGF 591 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + + + + + + +M L + L Sbjct: 592 VENVAKKYFQYEVIWITIFVMGMLGLLFDVALRK 625 Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 17/193 (8%) Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 ++F +R P++++ + +P L + + F GK + Sbjct: 458 IIFGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLVITVFGIDNVGK--------V 509 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F +F M S S S S WQ ++ P S+P ++ + ++ Sbjct: 510 FLLFMVSFSIMIISARAGAAGTQLSKIHASHSLGASKWQILRHVIFPNSLPEILTGVRVA 569 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + W +VA+E + GIG +A K I + M + L+D L Sbjct: 570 VGMCWGTLVAAEFLAGTT------GIGFVENVAKKYFQYEVIWITIFVMGMLGLLFDVAL 623 Query: 260 FRPM---IVWSNK 269 + + I W K Sbjct: 624 RKIIDKTIPWHGK 636 >gi|159037257|ref|YP_001536510.1| binding-protein-dependent transport systems inner membrane component [Salinispora arenicola CNS-205] gi|157916092|gb|ABV97519.1| binding-protein-dependent transport systems inner membrane component [Salinispora arenicola CNS-205] Length = 663 Score = 133 bits (335), Expect = 7e-29, Method: Composition-based stats. Identities = 83/592 (14%), Positives = 181/592 (30%), Gaps = 57/592 (9%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62 L + I++ + +L ++ VI +++ V + + L Sbjct: 90 LVTFVQGLIAQPAYGRPVPVLGWLGVIALVSYASWAFANWRVALLAAGGFTL-FGLQGLW 148 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T L A+ +SLLF LA S R ++ P+LD+MQ++P +L + Sbjct: 149 QESMDTLALTLVAVFVSLLFGIPLGILAGLSDRFHRLITPVLDLMQTMPTFVYLAPLTLV 208 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F+ +A A + + ++P E + SF + Q+ Sbjct: 209 FLIG--------PASATIATLIYAMPPAIRITAHGIRSVPAPPVEATDSFGATRRQRLTK 260 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 +P S +V + ++ V + +I PG+G + A++ D+ Sbjct: 261 ALLPLSKRTIVLGVNQTIMAALAMVTVAALI-------DAPGLGKTVIKALQTTDVGTAF 313 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADS------------------- 283 A + ++ + + D+ + + R E+ P Sbjct: 314 NAGVAIVVMAIVLDR------VTTAASVRAEQGDSTNPRTRRMLLAGFGLLAAVCSYLSY 367 Query: 284 ---WVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340 W + + + NN+ L G ++ L Sbjct: 368 TYLWAAEFPAGVRLGEHLSQGATAVTTWAQNNLSDLT---GAVKDGVTIGLLNPLEALLT 424 Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 + +V A+ ++ + +T+ +V ++ + Sbjct: 425 ESPWWLMGAVIVALAALIGNLRAAAVAAVCVGLLVGSGLWHASMVTLAMTLVATMLVVTL 484 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 + VG+W+G I+P PA V+ V+ S + Sbjct: 485 GVVVGVWMGRSNRADRVIRPVLDAGQTMPAFVYLIPFVALFSVSR----FTAIFAGVVYA 540 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 + V G A P E A++ W+ + LP + Sbjct: 541 APVAIKIVADGVRAIPQSTVEAATAAGSNNWQTITKVQLPMARQSLTLATNQGLIYVLSM 600 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++ + G + +A ++ + + + + + + L+R Sbjct: 601 VVIGGLVGAGALGYDV------VAGFSQGQLYGKGLAAGVAIVVLGIMLDRI 646 >gi|304405835|ref|ZP_07387493.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304345078|gb|EFM10914.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 292 Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++FRV ++A II IP+G+ G + + I+P + + PA F PL++ V Sbjct: 102 GVSIFRVTGGFLLACIIGIPLGVLAGTFKYGEAFIEPPMEFIRYMPAVAFIPLIMVWVGI 161 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+ G + ++ V P D + + + + W+ ++LP I Sbjct: 162 G----EWAKIMLIFIGCFFQLVLMVADNVRRVPRDLLQASFTLGASRWKVIETVLLPAIQ 217 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G AW +V+E+ + +GLG I ++ + ++ +G++++ Sbjct: 218 PQLMHTLRLILGWAWTYLVVAELVA------VNSGLGYAIMKAQRYLNTDQIFVGIIVIG 271 Query: 564 CFVLALNRFL 573 L +R Sbjct: 272 LLGLISDRIF 281 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 86/218 (39%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +++ + L + + R+ +++ + LA + + Sbjct: 78 LPKPHEVLAELIHLLGTADYWHHIGVSIFRVTGGFLLACIIGIPLGVLAGTFKYGEAFIE 137 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P ++ ++ +P + F+ +V+ E A I IF + + + ++ + Sbjct: 138 PPMEFIRYMPAVAFIPLIMVWVGIG--------EWAKIMLIFIGCFFQLVLMVADNVRRV 189 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 PRDL + S + S W+ + +P P L+ + + + W ++V +E++ V Sbjct: 190 PRDLLQASFTLGASRWKVIETVLLPAIQPQLMHTLRLILGWAWTYLVVAELVAVNS---- 245 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A + + I ++ + + + D++ Sbjct: 246 --GLGYAIMKAQRYLNTDQIFVGIIVIGLLGLISDRIF 281 >gi|163737617|ref|ZP_02145034.1| ABC transporter permease protein [Phaeobacter gallaeciensis BS107] gi|161389143|gb|EDQ13495.1| ABC transporter permease protein [Phaeobacter gallaeciensis BS107] Length = 664 Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats. Identities = 85/540 (15%), Positives = 174/540 (32%), Gaps = 56/540 (10%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L V A T +L A+ I + A + +L P+LD+MQ+IPI + Sbjct: 144 LAVFGQWDSAMVTLASVLIAVPIGAGGGLLTGIWAYRHPVGERILSPLLDLMQTIPIFAY 203 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L + F ++A+ A M +L ++ ++ + R + Sbjct: 204 LVPILFMFG--------FGPVSALVATIIYATPPMIRVTILALKSVDPEILDFGRMAGTT 255 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 Q W + VP + L+ + + V+ + MI G G+G + A++ Sbjct: 256 PRQLMWRVLVPSASQSLMVGVNQVIMLTLNMVIIASMIGAG-------GLGFDVLAALRR 308 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFL 295 D+ A A + ++ + D+L S F + A ++T + Sbjct: 309 LDIGAGFEAGIAIVVLAIAVDRL--------SQAFAERMGQVHHIAPGSKATRHKRTVLV 360 Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN-----QRVSYMLDIFWFC 350 + +W ++ + E L N + V ++ Sbjct: 361 LSLLIITWGLGRFSPLLLQYPISQTITTGDFWSETVKYLNVNYFDAFEAVKVFFLHWFML 420 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----------------ITMFRVVVL 393 + +GI W ++ ++ + L C +T++ Sbjct: 421 PIKKTLLGIPWPWAVAMLTLVGWRAGGLRLALMCGSMSTLIAFSGLWAKAMVTVYLCGAS 480 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 +I+A++I +P+G+ I F L P+ V+ VV + + Sbjct: 481 VILATLIGVPLGVLAALNKRAGVAIGLFIDTLQTLPSFVYLIPVVMLFRVGDFTAMIAIV 540 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 L + Y G + + E T W+ R + LP P + G Sbjct: 541 LYALAPAVRY----AAHGMRSVSGELIEAGLVSGCTRWQLLRMVRLPMALPEILLGINQT 596 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 A + +++ + LG + + K ++ L + + +R + Sbjct: 597 IMLALSMLVITALVGTRD-------LGQEVYIALTKADTGRGLVAGLAIAFIAIIADRLV 649 >gi|71083507|ref|YP_266226.1| taurine uptake ABC transporter permease protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062620|gb|AAZ21623.1| probable taurine uptake ABC transporter permease protein [Candidatus Pelagibacter ubique HTCC1062] Length = 637 Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 10/214 (4%) Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + + + F + + + RV++ +++ I +P+G+++G P Sbjct: 422 KVLSVVTGEFKLFKIPVPMGHIWDSFLRVLLGLVLGIIFGVPLGLFMGLNRFAKGFFDPL 481 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 +L P + PLV++ N+ L+ + ++ + AGA+ Sbjct: 482 IELYRPVPPLAWAPLVITVFGI----DNVGKVFLLFMVSFSIMIISARAGAAGTQLSKIH 537 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 + S + W+ R++I P P +TG A G W + +E + TTG+G Sbjct: 538 ASHSLGASKWQILRHVIFPNSLPEILTGVRVAVGMCWGTLVAAEFLAG------TTGIGF 591 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + + + + + + +M L + L Sbjct: 592 VENVAKKYFQYEVIWITIFVMGMLGLLFDVALRK 625 Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 17/193 (8%) Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 ++F +R P++++ + +P L + + F GK + Sbjct: 458 IIFGVPLGLFMGLNRFAKGFFDPLIELYRPVPPLAWAPLVITVFGIDNVGK--------V 509 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F +F M S S S S WQ ++ P S+P ++ + ++ Sbjct: 510 FLLFMVSFSIMIISARAGAAGTQLSKIHASHSLGASKWQILRHVIFPNSLPEILTGVRVA 569 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + W +VA+E + GIG +A K I + M + L+D L Sbjct: 570 VGMCWGTLVAAEFLAGTT------GIGFVENVAKKYFQYEVIWITIFVMGMLGLLFDVAL 623 Query: 260 FRPM---IVWSNK 269 + + I W K Sbjct: 624 RKIIDKTIPWHGK 636 >gi|57651175|ref|YP_185058.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus COL] gi|87161514|ref|YP_492890.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193951|ref|YP_498738.1| hypothetical protein SAOUHSC_00138 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220330|ref|YP_001331153.1| hypothetical protein NWMN_0118 [Staphylococcus aureus subsp. aureus str. Newman] gi|161508439|ref|YP_001574098.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258451611|ref|ZP_05699637.1| ABC transporter [Staphylococcus aureus A5948] gi|262048266|ref|ZP_06021152.1| hypothetical protein SAD30_1687 [Staphylococcus aureus D30] gi|262051065|ref|ZP_06023290.1| hypothetical protein SA930_0646 [Staphylococcus aureus 930918-3] gi|284023186|ref|ZP_06377584.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 132] gi|294849107|ref|ZP_06789851.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A9754] gi|57285361|gb|AAW37455.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus COL] gi|87127488|gb|ABD22002.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201509|gb|ABD29319.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373130|dbj|BAF66390.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160367248|gb|ABX28219.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860659|gb|EEV83481.1| ABC transporter [Staphylococcus aureus A5948] gi|259160968|gb|EEW45987.1| hypothetical protein SA930_0646 [Staphylococcus aureus 930918-3] gi|259163576|gb|EEW48132.1| hypothetical protein SAD30_1687 [Staphylococcus aureus D30] gi|294823999|gb|EFG40424.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A9754] gi|315198394|gb|EFU28724.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320141497|gb|EFW33338.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142247|gb|EFW34062.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329731875|gb|EGG68235.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21189] Length = 253 Score = 133 bits (335), Expect = 9e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 105/251 (41%), Gaps = 15/251 (5%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRT 68 + + I + F+ + ++ I+ H +V + V + Q+ + + Sbjct: 4 PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWSFIVTGEIFQHLAIS 63 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R ++ V++LL L ++R L + P+ +++ I + + F V++F Sbjct: 64 LWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 L AI IF + + + F+ + + +I +++ + L+GW + + P + Sbjct: 122 ------SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGA 175 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 ++ + M++ W F+V+ EMI G+G I A +L +L A+ + Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229 Query: 249 LGVIFLYDQLL 259 F+ D+ + Sbjct: 230 GLFGFIIDRFI 240 >gi|15923164|ref|NP_370698.1| hypothetical protein SAV0174 [Staphylococcus aureus subsp. aureus Mu50] gi|15925878|ref|NP_373411.1| hypothetical protein SA0168 [Staphylococcus aureus subsp. aureus N315] gi|21281877|ref|NP_644963.1| hypothetical protein MW0148 [Staphylococcus aureus subsp. aureus MW2] gi|49485050|ref|YP_042271.1| putative transport system permease [Staphylococcus aureus subsp. aureus MSSA476] gi|148266599|ref|YP_001245542.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JH9] gi|150392638|ref|YP_001315313.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JH1] gi|156978504|ref|YP_001440763.1| hypothetical protein SAHV_0173 [Staphylococcus aureus subsp. aureus Mu3] gi|253316390|ref|ZP_04839603.1| hypothetical protein SauraC_09651 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253734736|ref|ZP_04868901.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|255004970|ref|ZP_05143571.2| hypothetical protein SauraM_00835 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794012|ref|ZP_05642991.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258408580|ref|ZP_05680865.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258421170|ref|ZP_05684097.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A9719] gi|258438920|ref|ZP_05690011.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|258444155|ref|ZP_05692489.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258447034|ref|ZP_05695184.1| ABC transporter, permease [Staphylococcus aureus A6300] gi|258448492|ref|ZP_05696605.1| ABC transporter, permease [Staphylococcus aureus A6224] gi|258455725|ref|ZP_05703680.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A5937] gi|269201825|ref|YP_003281094.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED98] gi|282893330|ref|ZP_06301563.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8117] gi|282926281|ref|ZP_06333913.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A10102] gi|295405444|ref|ZP_06815254.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8819] gi|296276222|ref|ZP_06858729.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MR1] gi|297209321|ref|ZP_06925720.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244781|ref|ZP_06928661.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8796] gi|300911320|ref|ZP_07128769.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|13700090|dbj|BAB41389.1| SA0168 [Staphylococcus aureus subsp. aureus N315] gi|14245941|dbj|BAB56336.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21203312|dbj|BAB94013.1| MW0148 [Staphylococcus aureus subsp. aureus MW2] gi|49243493|emb|CAG41917.1| putative transport system permease [Staphylococcus aureus subsp. aureus MSSA476] gi|147739668|gb|ABQ47966.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JH9] gi|149945090|gb|ABR51026.1| binding-protein-dependent transport systems inner membrane component [Staphylococcus aureus subsp. aureus JH1] gi|156720639|dbj|BAF77056.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|253727215|gb|EES95944.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|257787984|gb|EEV26324.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257840589|gb|EEV65048.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257842594|gb|EEV67016.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A9719] gi|257847796|gb|EEV71792.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|257850414|gb|EEV74362.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257854047|gb|EEV77000.1| ABC transporter, permease [Staphylococcus aureus A6300] gi|257858123|gb|EEV81011.1| ABC transporter, permease [Staphylococcus aureus A6224] gi|257861937|gb|EEV84710.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A5937] gi|262074115|gb|ACY10088.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED98] gi|282591610|gb|EFB96681.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A10102] gi|282764016|gb|EFC04143.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8117] gi|285815899|gb|ADC36386.1| ABC transporter permease protein with unknown substrate [Staphylococcus aureus 04-02981] gi|294969519|gb|EFG45538.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8819] gi|296886254|gb|EFH25188.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178298|gb|EFH37545.1| sulfonate/nitrate/taurine transport system permease [Staphylococcus aureus A8796] gi|300887499|gb|EFK82695.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|312828698|emb|CBX33540.1| binding-protein-dependent transport system inner membrane component family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130148|gb|EFT86136.1| hypothetical protein CGSSa03_04749 [Staphylococcus aureus subsp. aureus CGS03] gi|329725698|gb|EGG62177.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21172] Length = 253 Score = 133 bits (335), Expect = 9e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 105/251 (41%), Gaps = 15/251 (5%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRT 68 + + I + F+ + ++ I+ H P + + + + Q+ + + Sbjct: 4 PTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAIS 63 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R ++ V++LL L ++R L + P+ +++ I + + F V++F Sbjct: 64 LWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIG-- 121 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 L AI IF + + + F+ + + +I +++ + L+GW + + P + Sbjct: 122 ------SLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGA 175 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 ++ + M++ W F+V+ EMI G+G I A +L +L A+ + Sbjct: 176 FKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVLAAIFFI 229 Query: 249 LGVIFLYDQLL 259 F+ D+ + Sbjct: 230 GLFGFIIDRFI 240 >gi|15668589|ref|NP_247387.1| nitrate transporter protein NrtB homolog CmpB [Methanocaldococcus jannaschii DSM 2661] gi|2501405|sp|Q57856|Y413_METJA RecName: Full=Putative ABC transporter permease protein MJ0413 gi|1591119|gb|AAB98402.1| nitrate transporter protein (nrtB) homolog (cmpB) [Methanocaldococcus jannaschii DSM 2661] Length = 267 Score = 133 bits (335), Expect = 9e-29, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 18/223 (8%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 I +I I++ RV+ ++AS + IP+GI +G+ ++S +LL Sbjct: 54 LIHPFQGILGTGSLIDNTIISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELL 113 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL ++ ++ + + F IL N I+G P E A + Sbjct: 114 RPIPPLAWVPLSLAWFGLGEMSMIFIIFIGAFFP----ILINTISGVKGVPTPLIEAALT 169 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 G +++P P +TG G AW + +E+ GLG I Sbjct: 170 LGAKGRDILIKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPS-----SNAGLGYLIMY 224 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR---------FLWHPLYL 579 + V+ ++I+ L L+R F+W + Sbjct: 225 AYSLSRMDVVIACMIIIGLIGLVLDRGLRYIEDKYFVWRKMMK 267 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 82/204 (40%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L SL + R++S +++ L R + + ++++++ IP L + Sbjct: 62 LGTGSLIDNTIISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELLRPIPPLAW 121 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + ++ +F E++ IF IF + + + + +P L E + + Sbjct: 122 VPLSLAWFGLG--------EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAK 173 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 G + +P S P ++ + + W VVA+EM+ + G+G I A Sbjct: 174 GRDILIKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPSSNA-----GLGYLIMYAYSL 228 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ M+ + + + D+ L Sbjct: 229 SRMDVVIACMIIIGLIGLVLDRGL 252 >gi|21227463|ref|NP_633385.1| ABC transporter permease [Methanosarcina mazei Go1] gi|20905834|gb|AAM31057.1| ABC transporter, permease protein [Methanosarcina mazei Go1] Length = 262 Score = 133 bits (335), Expect = 9e-29, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 71/191 (37%), Gaps = 10/191 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ + I A I+ IP+GI +G+ + I P ++L P + P + Sbjct: 64 LTSLLHFSIGIAAAFILGIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVWFGL 123 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGI 502 H ++ G + I+ N G P + E A T RYI +P Sbjct: 124 TH----QAAGFVVFAGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRYIAIPSA 179 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P G A G W + +E+ + GLG I + V++ +L++ Sbjct: 180 MPSIAAGIRIAMGVGWMCLVAAEMFG-----VSNRGLGYQIWHNYYLHRMDFVLVYMLLL 234 Query: 563 CCFVLALNRFL 573 L ++RF Sbjct: 235 GFIGLFIDRFF 245 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 15/240 (6%) Query: 22 LLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 L+ V + ++ ++ D+V+ + + + + L + + Sbjct: 19 LVIAVAIWQLVADRIVQNKLLLPSFYDVVNSFTVIVKNGLIYTDTLTSLLHFSIGIAAAF 78 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + PI++I++ IP L ++ F +V+F AA F Sbjct: 79 ILGIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVWFGL--------THQAAGF 130 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVPFSMPGLVWNMMMS 199 +F ++ + + Y N+PR E ++ + Y+ +P +MP + + ++ Sbjct: 131 VVFAGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRYIAIPSAMPSIAAGIRIA 190 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 M GW +VA+EM V + G+G I + +L ML + + D+ Sbjct: 191 MGVGWMCLVAAEMFGVSNR-----GLGYQIWHNYYLHRMDFVLVYMLLLGFIGLFIDRFF 245 >gi|307324086|ref|ZP_07603295.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] gi|306890535|gb|EFN21512.1| binding-protein-dependent transport systems inner membrane component [Streptomyces violaceusniger Tu 4113] Length = 269 Score = 133 bits (334), Expect = 9e-29, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 18/266 (6%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINI-LLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 P R + P +F L+A VL + I + G+ + P + L +L Q A Sbjct: 17 PRGARRTVHPLVFHLIALVLGVAIWALTAAAGLADIPGPLSVSSRARELLADGTLTQDAL 76 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+L + L L +L P + ++IP L + +V Sbjct: 77 ASLQRVLLGFALGTLVAVPVGFLMGWYPVARGLLEPYVQFFRTIPPLALIPLVIVLMGIG 136 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 K IF IF + + + +Q + + R L + +R S F + +P Sbjct: 137 ETPK--------IFVIFLAAFMSCVVAAFQGVTGVDRTLIDAARVLGASDRTVFLKVVIP 188 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 S P ++ M + + W VVA+EMI G+G + A D+ I ++ Sbjct: 189 ASTPFILVGMRIGLGAAWATVVAAEMIG------AQKGLGFEMVHAQTYYDVPTIFVGLI 242 Query: 247 TMLGVIFLYDQLLF---RPMIVWSNK 269 ++ + + D+LL R + W + Sbjct: 243 SIGVIGLVMDRLLLVAERRLTAWQER 268 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 84/262 (32%), Gaps = 13/262 (4%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385 + ++ +L + + + + + + Sbjct: 18 RGARRTVHPLVFHLIALVLGVAIWALTAAAGLADIPGPLSVSSRARELLADGTLTQDALA 77 Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV++ + +++ +PVG +G+ P ++P+ Q P PLV+ + Sbjct: 78 SLQRVLLGFALGTLVAVPVGFLMGWYPVARGLLEPYVQFFRTIPPLALIPLVIVLMGIGE 137 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ + G + + A + + +++P P+ Sbjct: 138 T----PKIFVIFLAAFMSCVVAAFQGVTGVDRTLIDAARVLGASDRTVFLKVVIPASTPF 193 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G G AW + +E+ GLG + + P + +G++ + Sbjct: 194 ILVGMRIGLGAAWATVVAAEMIG------AQKGLGFEMVHAQTYYDVPTIFVGLISIGVI 247 Query: 566 VLALNRFLW---HPLYLYGTRC 584 L ++R L L + R Sbjct: 248 GLVMDRLLLVAERRLTAWQERR 269 >gi|124266117|ref|YP_001020121.1| ABC transporter permease [Methylibium petroleiphilum PM1] gi|124258892|gb|ABM93886.1| ABC transporter permease protein [Methylibium petroleiphilum PM1] Length = 258 Score = 133 bits (334), Expect = 9e-29, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 10/184 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV +A+ + +P+G+++G+ + P + L P + PL + S Sbjct: 60 ASVRRVATAFFLATGLGVPLGLFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFS-- 117 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L + + N + G + + A + W+ +R +I+PG P Sbjct: 118 --GTETPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGASKWQVFREVIVPGSMP 175 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y TG + G AW + + E+ S GLG I S +P +V+G++ + Sbjct: 176 YIFTGLQISVGVAWFSLVAGEMVSGE------FGLGYVINTSYTMVQYPTIVIGMVTLGA 229 Query: 565 FVLA 568 Sbjct: 230 VGYV 233 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 14/191 (7%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + R+ +A ++ S+ + PI + ++ IPIL ++ ++ F Sbjct: 57 HIWASVRRVATAFFLATGLGVPLGLFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMF 116 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 G E IF F + + + + +I + S WQ F + Sbjct: 117 S--------GTETPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGASKWQVFREV 168 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 VP SMP + + +S+ WF +VA EM+ G+G I + I+ Sbjct: 169 IVPGSMPYIFTGLQISVGVAWFSLVAGEMVSG------EFGLGYVINTSYTMVQYPTIVI 222 Query: 244 AMLTMLGVIFL 254 M+T+ V ++ Sbjct: 223 GMVTLGAVGYV 233 >gi|256392966|ref|YP_003114530.1| binding-protein-dependent transporters inner membrane component [Catenulispora acidiphila DSM 44928] gi|256359192|gb|ACU72689.1| binding-protein-dependent transport systems inner membrane component [Catenulispora acidiphila DSM 44928] Length = 314 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 88/260 (33%), Gaps = 11/260 (4%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 ++ + R G +R L+ S + V S G + Sbjct: 41 TDRAETRQRRDGELRTKAGRRLLRCVSLGAAILAWQLLTTHQVTFWIRFGNLPSAGAVAT 100 Query: 370 HFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 F +Q V + ++ R++ +IA + I GI + + P +++ Sbjct: 101 DFRHQLGTAVYYQDIAASLLRILGGFLIAGLAGIGTGIALARSRFAEDILGPLLEVVRPI 160 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 PA P+ + + + + + IL + A P ++ + Sbjct: 161 PAIALVPIAILAFP----SNEQGMVFITATAAFFPILVSTRHAVRALPTVVEDAVRTLGA 216 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 W R ++LPG P G G AW I +E+ S + G+G E+ Sbjct: 217 GRWTVLRRVVLPGALPGVFGGLSVGMGVAWICVISAEMISGQY------GIGYRTWEAYT 270 Query: 549 KGSFPEVVLGVLIMCCFVLA 568 +P VV+G+L + A Sbjct: 271 VVDYPSVVVGMLTIGLLGGA 290 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 17/210 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + + LR+L +I+ L A+SR +L P+L++++ IP + + ++ Sbjct: 113 QDIAASLLRILGGFLIAGLAGIGTGIALARSRFAEDILGPLLEVVRPIPAIALVPIAILA 172 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + G +F T+ + + S ++ +P +E+ R+ W Sbjct: 173 FPSNEQGM--------VFITATAAFFPILVSTRHAVRALPTVVEDAVRTLGAGRWTVLRR 224 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++PG+ + + M W V+++EMI GIG A D +++ Sbjct: 225 VVLPGALPGVFGGLSVGMGVAWICVISAEMISG------QYGIGYRTWEAYTVVDYPSVV 278 Query: 243 YAMLTMLGVI---FLYDQLLFRPMIVWSNK 269 MLT+ + +L R + W + Sbjct: 279 VGMLTIGLLGGATAAAVELAGRRVTGWLPR 308 >gi|323463373|gb|ADX75526.1| ABC transporter, permease protein [Staphylococcus pseudintermedius ED99] Length = 254 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R +V +IA ++ IP+GI +G + I+P Q + + P Sbjct: 54 GEIFLHLGISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V L + + F I+FN I G N + ++A + ++ GW +R Sbjct: 114 IVLWFGIGSLPAIFIIFIAAFFP----IIFNTIKGVRTIDNHYLKIADNLNLHGWSLYRD 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 II PG F + ++G A G +W + E+ +GLG I +S + +V+ Sbjct: 170 IIFPGAFKHIMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++R + Sbjct: 224 SSIFFIGIFGFLIDRII 240 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 101/248 (40%), Gaps = 15/248 (6%) Query: 13 RRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 ++ + F+L+ +I I + P + + + + + + R Sbjct: 7 KKYLRPFYTFALFLLLWQCVIWIGHYQPVLLPGPFHVAQSIGNFIITGEIFLHLGISLYR 66 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 + +I+++ L ++R L + P+L ++ I + + F V++F Sbjct: 67 FIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTIRPISPIAWSPFIVLWFGIG----- 121 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 L AIF IF + + + F+ + + I +++ + L GW + + P + Sbjct: 122 ---SLPAIFIIFIAAFFPIIFNTIKGVRTIDNHYLKIADNLNLHGWSLYRDIIFPGAFKH 178 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 ++ + +++ W F+V+ EMI G+G I + +L +L ++ + Sbjct: 179 IMSGIHVAVGTSWIFLVSGEMIG------AQSGLGFLIVDSRNMLNLEDVLSSIFFIGIF 232 Query: 252 IFLYDQLL 259 FL D+++ Sbjct: 233 GFLIDRII 240 >gi|28872433|ref|NP_795052.1| taurine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28855688|gb|AAO58747.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 285 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ + + A++ IPVGI IG P + P + PL+V Sbjct: 91 GASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPLIVIWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ I AG A S T W+ R++I+P Sbjct: 151 GEFSK----VLLIYLAIFAPIAIATAAGVRTVDPARVRAAQSLGATRWQLIRHVIVPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 207 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIA 260 Query: 564 CFVLALN---RFLWHPLYLY 580 A+ R L L + Sbjct: 261 IIAFAMELGLRALQRKLVPW 280 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ + L ++R + P+++ + IP L +L Sbjct: 84 STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATAAGVRTVDPARVRAAQSLGATRWQ 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 249 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281 >gi|227502579|ref|ZP_03932628.1| nitrate ABC transporter permease protein [Corynebacterium accolens ATCC 49725] gi|227076741|gb|EEI14704.1| nitrate ABC transporter permease protein [Corynebacterium accolens ATCC 49725] Length = 293 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 102/293 (34%), Gaps = 24/293 (8%) Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 + + S + + S + L + L I + + Sbjct: 1 MTTLKNHSASTSTAHSTGTHTAAPNSRRTAGRKKKRRESLWKAMGLGIALFIAFIAIWQA 60 Query: 355 VAIGI-----------AWQSIGYIVNHFTYQD---VLYVIWLGCITMFRVVVLIIIASII 400 VA W I++ Y+D + + W ++ RV++ IA +I Sbjct: 61 VAAAGWLSDIAPTPARTWDRAVEILSDPFYRDGPASVGIFWHMVASLRRVLIGFAIAMVI 120 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 IP+G W+G PF Q+L + PL ++ + + ++I Sbjct: 121 AIPLGFWLGSSATFRRATDPFVQILRPVSPLAWLPLGLALLR----DAENTAVFVIILSA 176 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 W L N I +K +A++ + YI+ P P +TG + AW Sbjct: 177 LWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPAALPGIITGMRQSLSTAWLV 236 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ G G+G ++ + +V+ ++++ LAL+ + Sbjct: 237 IVAAEMLVGGQ------GVGFFVWNMWNRLDIDAIVVVIVLIGVIGLALDYLV 283 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 94/247 (38%), Gaps = 23/247 (9%) Query: 22 LLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDV--------HSLPQYASRTTLRM 72 +AF+ + + P R V I D + + + R+ Sbjct: 51 FIAFIAIWQAVAAAGWLSDIAPTPARTWDRAVEILSDPFYRDGPASVGIFWHMVASLRRV 110 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L I+++ S P + I++ + L +L + + Sbjct: 111 LIGFAIAMVIAIPLGFWLGSSATFRRATDPFVQILRPVSPLAWLPLGLALLRD------- 163 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 AE A+F I S +W + +++ I + ++ + + Q+ Y+ P ++PG+ Sbjct: 164 -AENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPAALPGI 222 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + M S+S W +VA+EM+V G G+G ++ D+ AI+ ++ + + Sbjct: 223 ITGMRQSLSTAWLVIVAAEMLVGGQ------GVGFFVWNMWNRLDIDAIVVVIVLIGVIG 276 Query: 253 FLYDQLL 259 D L+ Sbjct: 277 LALDYLV 283 >gi|170745423|ref|YP_001766880.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] gi|170659024|gb|ACB28078.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] Length = 295 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 100/274 (36%), Gaps = 17/274 (6%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV- 376 R +R H E L + + ++ + VA+ + + +I ++ + Sbjct: 32 RARRWLRLHGAEFRAALIGLVSLVLFVALWQYLTANRVALYVRFLNIPTPMDVLGRAVIA 91 Query: 377 ---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 I+ R+++ ++A I +P+G+ +G + P ++L PA + Sbjct: 92 LRSPVFGDHVLISCRRILLGFLLAGGIAVPLGLLMGRYRLLREIAFPICEVLRPIPAIAW 151 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + + + + G+ + IL N + G + A T Sbjct: 152 VPMAIMLWPTNEGS----IVFITFLGSFFPILINTLQGMAQVDPVLVRAARCLGATEPAV 207 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 +R + LP P TG G AW + I +E+ S G+G + E+ +P Sbjct: 208 FREVYLPASLPQIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYP 261 Query: 554 EVVLGVLIMCCFVLAL---NRFLWHPLYLYGTRC 584 ++ LG++ + L R + + + Sbjct: 262 DIALGMITIGLLGLGSSFAIRLVGRLVMPWAAAR 295 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 13 RRIFPNIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 R + L+ FV + + L P D++ I L + + Sbjct: 45 RAALIGLVSLVLFVALWQYLTANRVALYVRFLNIPTPMDVLGRAVIALRSPVFGDHVLIS 104 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L +++ L + R L + PI ++++ IP + ++ ++ + Sbjct: 105 CRRILLGFLLAGGIAVPLGLLMGRYRLLREIAFPICEVLRPIPAIAWVPMAIMLW----- 159 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E + +F F + + + Q + + L +R + F + +P S Sbjct: 160 ---PTNEGSIVFITFLGSFFPILINTLQGMAQVDPVLVRAARCLGATEPAVFREVYLPAS 216 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + + M W ++A+EMI GIG + A I M+T+ Sbjct: 217 LPQIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYPDIALGMITI 270 Query: 249 LGVIF---LYDQLLFRPMIVWS 267 + +L+ R ++ W+ Sbjct: 271 GLLGLGSSFAIRLVGRLVMPWA 292 >gi|163852761|ref|YP_001640804.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|163664366|gb|ABY31733.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] Length = 291 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 92/262 (35%), Gaps = 10/262 (3%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +P+ + R + +++ L + V Sbjct: 18 APVRAPRGRPVRPARPSSLRRLALRGVALALSLMAWHLAASSRLDLGLVTFRNVPTPAAA 77 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + + ++ RV+ + A + + +G+ IG + P ++L Sbjct: 78 AQAAWALVHAPALPTHLGASLARVLSGFLAALGVGVALGLAIGRSRLARDLLLPPLEVLR 137 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 PA + PL + + + ++ + G + IL N + G + A S Sbjct: 138 PIPAVAWIPLAILMFP----SSEVSMAFITFTGALFPILLNTVHGVESVHPRLVAAARSL 193 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 R +ILPG P VTGA G AW + +E+ S + G+G + ES Sbjct: 194 GAGDAAILREVILPGAAPSIVTGAAIGMGTAWFCLVTAEMISGQY------GIGYFTWES 247 Query: 547 TEKGSFPEVVLGVLIMCCFVLA 568 ++ ++V+G+L++ + Sbjct: 248 YTLQNYDDIVVGMLLIGLLGMG 269 Score = 116 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 14/222 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ L + P + +LP + + R+LS + +L Sbjct: 61 LDLGLVTFRNVPTPAAAAQAAWALVHAPALPTHLGASLARVLSGFLAALGVGVALGLAIG 120 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +SR +L+P L++++ IP + ++ ++ F +E++ F FT ++ + Sbjct: 121 RSRLARDLLLPPLEVLRPIPAVAWIPLAILMF--------PSSEVSMAFITFTGALFPIL 172 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ L +RS + +P + P +V + M WF +V +E Sbjct: 173 LNTVHGVESVHPRLVAAARSLGAGDAAILREVILPGAAPSIVTGAAIGMGTAWFCLVTAE 232 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 MI GIG + + Q+ I+ ML + + Sbjct: 233 MISG------QYGIGYFTWESYTLQNYDDIVVGMLLIGLLGM 268 >gi|332383238|gb|AEE68085.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis CS] Length = 285 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV +A IP+G+ IG+ S + P Q L P + P ++ Sbjct: 92 STMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIRD 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L+ G + I+ N GA + AS + + R ++LP P Sbjct: 152 MG----SIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMPS 207 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG G +W A IVSE+ + +GLG + ++ G V+ ++ + Sbjct: 208 IFTGLRIGLGISWTAVIVSEMVA------VKSGLGYVLWDAYYVGRMDIVLANMVSIGMM 261 Query: 566 VLALNRFL 573 +R + Sbjct: 262 GFLSDRLI 269 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 14/193 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T+R+ +++ SR +L P++ ++ IPI +L F++ F Sbjct: 91 YSTMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIR 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 ++ +IF IF + + + Q ++ R+L + S Q + +P Sbjct: 151 --------DMGSIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLP 202 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +MP + + + + W V+ SEM+ V G+G + A + +L M+ Sbjct: 203 AAMPSIFTGLRIGLGISWTAVIVSEMVAVKS------GLGYVLWDAYYVGRMDIVLANMV 256 Query: 247 TMLGVIFLYDQLL 259 ++ + FL D+L+ Sbjct: 257 SIGMMGFLSDRLI 269 >gi|220924993|ref|YP_002500295.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219949600|gb|ACL59992.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 277 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 10/174 (5%) Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 ++ RV+ I + +PVG+ +G + + P Q+L P + PL + Sbjct: 81 AVASLGRVIAGFAIGVALALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPLAIVWFG 140 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 N L+ GT + +L N +AG + + A + W +R +ILP Sbjct: 141 LG----NPPALFLIAIGTFFPVLVNTVAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAA 196 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 P+ + G G A+ IV+E+ + + GLG I E+ E +++ Sbjct: 197 SPFVLAGMRIGIGTAFIVVIVAEMIA------VSDGLGYRILEAREYMWSDKII 244 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 89/244 (36%), Gaps = 14/244 (5%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 +F + + H + L LP A + R+++ Sbjct: 34 GLFSAVVLPPPSAVAVRWFHSLIPALPHDPQTQSYAEWLFSGELPHDAVASLGRVIAGFA 93 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 I + L S RL ++ P+L I++ IP + ++ +V+F P Sbjct: 94 IGVALALPVGLLMGTSDRLYGLVNPLLQILRPIPPIAYIPLAIVWFGLGNPP-------- 145 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 A+F I + + + + + +R+ W F + +P + P ++ M Sbjct: 146 ALFLIAIGTFFPVLVNTVAGVRQVDSIYIRAARNLGAGPWTLFRRVILPAASPFVLAGMR 205 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + + + V+ +EMI V D G+G I A + I+ MLT+ + L D Sbjct: 206 IGIGTAFIVVIVAEMIAVSD------GLGYRILEAREYMWSDKIIGGMLTIGLLGLLIDS 259 Query: 258 LLFR 261 + R Sbjct: 260 AMSR 263 >gi|163734595|ref|ZP_02142034.1| glycine betaine/proline ABC transporter, permease protein [Roseobacter litoralis Och 149] gi|161392088|gb|EDQ16418.1| glycine betaine/proline ABC transporter, permease protein [Roseobacter litoralis Och 149] Length = 663 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 78/492 (15%), Positives = 159/492 (32%), Gaps = 54/492 (10%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T ++ A ++ + LA + L P+L ++Q++P +L V++F Sbjct: 151 AMETMSVLVVAAPLAFVIGLSLGILAWRKPWFNRALKPVLSVLQTLPFFTYLLPAVIFFK 210 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G GA I+AI M L +P ++ E S WQ ++ Sbjct: 211 V---GPTAGAVATTIYAIP-----PMILMTTLGLQKVPAEVVEAGEMSGCSRWQLLRHVY 262 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + ++ + ++ +VV I +PG+G+ + + L Sbjct: 263 LPSARREILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSFEI 315 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWN 304 +T++ + + D++ W K + G ++ L F+ FI S + Sbjct: 316 GVTIVLLAVMLDRMS----KAWVAKQPVHFEKGTPWWKRHLIALIGVGLFVFFIVVSQFV 371 Query: 305 FFSP-------------------------LSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 + + R+ ++ P L Sbjct: 372 EVASTIGRRQNFSQGREIDVLIKGFLDINIVKTTTGFLRSFLNVQVLIPFRNFLLSIPTP 431 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +L + + + G + +V + D IT++ V+ + +A + Sbjct: 432 AFILLIVAFALWLGGKKQAVLAGIFFSLVALSGWWD------RSVITLYSVISAVTLAMM 485 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 +P+GIW S++I FP+ V+ + + + + + Sbjct: 486 FGLPLGIWAARTEKWSNRILLVCDTAQTFPSFVYLIPAIMLFGITDVAIVFSILIFAMVP 545 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 Y I G + P + E A T + + LP P G A A+ Sbjct: 546 LTRY----TIEGLRSVPEEMIEAADMAGATRRQKLWKVQLPLALPTMAVGFNQAIMFAFF 601 Query: 520 ASIVSEVASWGH 531 I++ Sbjct: 602 MVIIAAFIGTQD 613 Score = 91.9 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 97/238 (40%), Gaps = 19/238 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 AF+L+I + L G ++ + +V ++ + T ++SA+ ++++F Sbjct: 432 AFILLIVAFALWLGGKKQAVLAGIFFSLVALS----GWWDRSVITLYSVISAVTLAMMFG 487 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AA++ + ++ + D Q+ P +L ++ F ++A +F+I Sbjct: 488 LPLGIWAARTEKWSNRILLVCDTAQTFPSFVYLIPAIMLFGI--------TDVAIVFSIL 539 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + +T + L ++P ++ E + + QK W + +P ++P + ++ Sbjct: 540 IFAMVPLTRYTIEGLRSVPEEMIEAADMAGATRRQKLWKVQLPLALPTMAVGFNQAIMFA 599 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 +F V+ + I D +G + + D+ + + + +D + + Sbjct: 600 FFMVIIAAFIGTQD-------LGQELQRTLAGTDMGKNFVLGICVSLMALTFDLTIMK 650 Score = 70.3 bits (171), Expect = 9e-10, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 11/213 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W+ F + ++ + TM +VV +A +I + +GI +P + ++ Sbjct: 128 GWRMALLGAGTFIWTALIGQWTIAMETMSVLVVAAPLAFVIGLSLGILAWRKPWFNRALK 187 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P +L P FF ++ V ++ + P I+ ++ G P + Sbjct: 188 PVLSVLQTLP---FFTYLLPAVIFFKVGPTAGAVATTIY-AIPPMILMTTLGLQKVPAEV 243 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 E + W+ R++ LP + G +++ GL Sbjct: 244 VEAGEMSGCSRWQLLRHVYLPSARREILVGVNQVIMLCLAMVVLTAFIGM-------PGL 296 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GA + + + + L+R Sbjct: 297 GAKLLAMMGSFKLGRSFEIGVTIVLLAVMLDRM 329 >gi|295695572|ref|YP_003588810.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] gi|295411174|gb|ADG05666.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] Length = 304 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 94/260 (36%), Gaps = 10/260 (3%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ + P +L L + ++ V + N Sbjct: 43 RRKPSIFKPFQPISPTWYLALALCGFIGFLGIWSLVTYTGSVDKLFLPTPTDILQNGIRM 102 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + T++RV++ +A+++ +P+GI +G I + ++P PA+ F Sbjct: 103 FAEFNFLNDIFATVWRVLLGFALAAVVAVPLGILMGVYRPIEAILEPLVSFARYMPASAF 162 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL++ V ++ G+ + ++ V + E A + Sbjct: 163 IPLLILWVGIGDAEK----VSVIFLGSLFSLILMVAVHVHHVRRELTEAAYTLGAKDGFV 218 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R++++P FP G AW IV+E+ + +G+G I +S Sbjct: 219 VRHVVIPAAFPEIYDTLRLVLGWAWTYVIVAELVA------AKSGIGYVILQSQRMLQTA 272 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++ G++++ L + + Sbjct: 273 DIIFGIVVIGFIGLLSDLLM 292 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 88/240 (36%), Gaps = 15/240 (6%) Query: 21 DLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 + F+ + ++ + P DI+ + T R+L ++ Sbjct: 67 GFIGFLGIWSLVTYTGSVDKLFLPTPTDILQNGIRMFAEFNFLNDIFATVWRVLLGFALA 126 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 + L R + +L P++ + +P F+ +++ KV Sbjct: 127 AVVAVPLGILMGVYRPIEAILEPLVSFARYMPASAFIPLLILWVGIGDAEKVS------- 179 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 IF ++++ + + ++ R+L E + + ++ +P + P + + + Sbjct: 180 -VIFLGSLFSLILMVAVHVHHVRRELTEAAYTLGAKDGFVVRHVVIPAAFPEIYDTLRLV 238 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + W +V+ +E++ GIG I + + I++ ++ + + L D L+ Sbjct: 239 LGWAWTYVIVAELVAAKS------GIGYVILQSQRMLQTADIIFGIVVIGFIGLLSDLLM 292 >gi|33595618|ref|NP_883261.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33600132|ref|NP_887692.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33565696|emb|CAE40344.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] gi|33567730|emb|CAE31644.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] Length = 285 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 + RV +A IP+G+ IG+ S + P Q L P + P ++ Sbjct: 92 STMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIRD 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L+ G + I+ N GA + AS + + R ++LP P Sbjct: 152 MG----SIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLPAAMPS 207 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG G +W A IVSE+ + +GLG + ++ G V+ ++ + Sbjct: 208 IFTGLRIGLGISWTAVIVSEMVA------VKSGLGYVLWDAYYVGRMDIVLADMVSIGMM 261 Query: 566 VLALNRFL 573 +R + Sbjct: 262 GFLSDRLI 269 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 14/193 (7%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 +T+R+ +++ SR +L P++ ++ IPI +L F++ F Sbjct: 91 YSTMRVAQGFALAMATGIPLGLAIGWSRLTSQLLDPLIQGLRPIPITAWLPFSIALFGIR 150 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 ++ +IF IF + + + Q ++ R+L + S Q + +P Sbjct: 151 --------DMGSIFLIFLGGFYAIVVNTTQGARDVDRNLVRAASMMGASSGQLMRRVVLP 202 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +MP + + + + W V+ SEM+ V G+G + A + +L M+ Sbjct: 203 AAMPSIFTGLRIGLGISWTAVIVSEMVAVKS------GLGYVLWDAYYVGRMDIVLADMV 256 Query: 247 TMLGVIFLYDQLL 259 ++ + FL D+L+ Sbjct: 257 SIGMMGFLSDRLI 269 >gi|82749885|ref|YP_415626.1| ABC transporter permease [Staphylococcus aureus RF122] gi|82655416|emb|CAI79802.1| probable ABC transporter permease [Staphylococcus aureus RF122] Length = 253 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V I+A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFIVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIDSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLNLTGWPLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 93/218 (42%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + + + Q+ + + R ++ +++L+ L ++R L + Sbjct: 37 LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFIVALVVAIPLGFLLGRNRWLYNAIE 96 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ +++ I + + F V++F L AI IF + + + F+ + + +I Sbjct: 97 PLFQLIRPISPIAWAPFVVLWFGID--------SLPAIAIIFIAAFFPIVFNTIKGVRDI 148 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +++ + L+GW + + P + ++ + M++ W F+V+ EMI Sbjct: 149 EPQYLKIAANLNLTGWPLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A +L +L A+ + F+ D+ + Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240 >gi|148547319|ref|YP_001267421.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|148511377|gb|ABQ78237.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] Length = 251 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 13/210 (6%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V IW +++ R+++ +++A ++ +P+G+ +G H+ + P Sbjct: 44 TLASLVELLGQGEVYGHIW---VSLKRILIGLLLALLMGVPLGLLVGSYRHLEAATTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + + + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLTATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 I ++ ++ ++ E++ VL++ L+ Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 80/221 (36%), Gaps = 14/221 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+ P + + L + + + R+L ++++LL L R L Sbjct: 34 GLSARFSPAATLASLVELLGQGEVYGHIWVSLKRILIGLLLALLMGVPLGLLVGSYRHLE 93 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 P ++ I L ++ V+ + F + + +W + + Sbjct: 94 AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + + ++SRS + W+ + VP + ++ + +++ W +V EM+ V Sbjct: 146 VRQLDPRWLQLSRSLTATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G +I ++ +L + + F+ D L Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240 >gi|26990346|ref|NP_745771.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida KT2440] gi|24985304|gb|AAN69235.1|AE016558_5 sulfonate ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 251 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 13/210 (6%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V IW +++ R+++ +++A ++ +P+G+ +G H+ + P Sbjct: 44 TLASLVELLGQGEVYGHIW---VSLKRILIGLLLALLMGVPLGLLVGSYRHLEAVTTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + + + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 I ++ ++ ++ E++ VL++ L+ Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240 Score = 93.5 bits (231), Expect = 1e-16, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 14/221 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+ P + + L + + + R+L ++++LL L R L Sbjct: 34 GLSARFSPAATLASLVELLGQGEVYGHIWVSLKRILIGLLLALLMGVPLGLLVGSYRHLE 93 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 V P ++ I L ++ V+ + F + + +W + + Sbjct: 94 AVTTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + + ++SRS + W+ + VP + ++ + +++ W +V EM+ V Sbjct: 146 VRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G +I ++ +L + + F+ D L Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240 >gi|213971168|ref|ZP_03399286.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382297|ref|ZP_07230715.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302058532|ref|ZP_07250073.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|213924037|gb|EEB57614.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 285 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ + + A++ IPVGI IG P + P + PL+V Sbjct: 91 GASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPLIVIWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ I G A S T W+ R++I+P Sbjct: 151 GEFSK----VLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQLIRHVIVPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 207 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVTDVVVLGILVIA 260 Query: 564 CFVLALN---RFLWHPLYLY 580 A+ R L L + Sbjct: 261 IIAFAMELGLRALQRKLVPW 280 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ + L ++R + P+++ + IP L +L Sbjct: 84 STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQ 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVT 249 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281 >gi|220903849|ref|YP_002479161.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868148|gb|ACL48483.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 277 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 30/227 (13%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 + + I++ RV IA+ + +P+GI +G++P +++ + F L + P + P Sbjct: 54 MGTLPANTLISLARVFAGYFIAAALAVPLGIVMGYKPGVNTALSTFLGLFRSIPPLAWVP 113 Query: 436 LVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 LV++ L N + + ++ G + IL + I G P Sbjct: 114 LVLAWFGMLSLADVFSVPIGAAYPYFHNIKVSMIFIIFIGGFYPILTSAIHGVGMVPQTL 173 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + A +R ++LP P V G G +W + +E+ +G+ Sbjct: 174 TDAARVLGAGQMDIFRKVLLPYAAPSIVNGLRIGLGVSWMCLVSAEMLPG-----SLSGV 228 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNR---------FLWHPL 577 G I + G V+ G++ + L+R F+W L Sbjct: 229 GYLITHAYTVGRTDVVIAGMISIGVVGALLDRLFRFYEDRKFVWKRL 275 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 17/216 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + + +LP + R+ + I+ + + L L + +SIP L + Sbjct: 52 ISMGTLPANTLISLARVFAGYFIAAALAVPLGIVMGYKPGVNTALSTFLGLFRSIPPLAW 111 Query: 116 LTFTVVYFMNLYPGKVIGAELAA------------IFAIFTSQVWNMTFSMYQSLCNIPR 163 + + +F L V + A IF IF + + S + +P+ Sbjct: 112 VPLVLAWFGMLSLADVFSVPIGAAYPYFHNIKVSMIFIIFIGGFYPILTSAIHGVGMVPQ 171 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L + +R F + +P++ P +V + + + W +V++EM+ L Sbjct: 172 TLTDAARVLGAGQMDIFRKVLLPYAAPSIVNGLRIGLGVSWMCLVSAEMLPG-----SLS 226 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A ++ M+++ V L D+L Sbjct: 227 GVGYLITHAYTVGRTDVVIAGMISIGVVGALLDRLF 262 >gi|221215496|ref|ZP_03588460.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD1] gi|221164680|gb|EED97162.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans CGD1] Length = 291 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 10/234 (4%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401 + + W + V + + ++ RV+ A++ Sbjct: 52 WQAAVHWRLSLGVVTFANVPAPADVGPALWALLHSPKLPMHLFASVTRVLAGFAAAAVTG 111 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 + +G+ IG + + P ++L PA + PL + L+ + + G Sbjct: 112 VGLGLAIGRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPSSELS----MMFITFVGAL 167 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + IL N + GA A A S G+ + +ILPG P TG G AW Sbjct: 168 FPILLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCL 227 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + +E+ + + G+G + S ++P++V+G+ ++ + + + Sbjct: 228 VTAEMIAGQY------GIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ + P D+ + L LP + + R+L+ + + Sbjct: 60 LSLGVVTFANVPAPADVGPALWALLHSPKLPMHLFASVTRVLAGFAAAAVTGVGLGLAIG 119 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R L L+P L++++ IP + ++ ++ F +EL+ +F F ++ + Sbjct: 120 RYRALEDALLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + L +RS G+ + + +P + P + + + M WF +V +E Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 MI GIG + + Q+ I+ M + + L+ R Sbjct: 232 MIAG------QYGIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 >gi|222444461|ref|ZP_03606976.1| hypothetical protein METSMIALI_00072 [Methanobrevibacter smithii DSM 2375] gi|261350985|ref|ZP_05976402.1| ABC transporter, permease protein [Methanobrevibacter smithii DSM 2374] gi|222434026|gb|EEE41191.1| hypothetical protein METSMIALI_00072 [Methanobrevibacter smithii DSM 2375] gi|288860324|gb|EFC92622.1| ABC transporter, permease protein [Methanobrevibacter smithii DSM 2374] Length = 246 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+F+V +I+AS++ IP+GI +G+ + + +L P + P + Sbjct: 60 TLFKVFGGMILASVVAIPLGILLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGT 119 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ G + IL I G E A + +ILP P Sbjct: 120 A----PAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADDKTVLTQVILPSAVPP 175 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 V+G G A +I +E+ ++GLG I +T V+G+L++ Sbjct: 176 IVSGLKVGVGIALMCTISAEMIG------SSSGLGYLILTATNLFDTGTTVVGMLVIGLI 229 Query: 566 VLALNRFL 573 L L+ Sbjct: 230 GLILDYVF 237 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 79/218 (36%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + + L T ++ M+++ + L +L + Sbjct: 34 LPSPGSVCNSAWNIIQSGKLFVDTMDTLFKVFGGMILASVVAIPLGILLGWYSKLETLCS 93 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 ++ I++ IP + ++ F++++F AIF IF V+ + + Sbjct: 94 FVISILRPIPPIAWIPFSILWFGIG--------TAPAIFIIFIGCVFPILIYTIDGVKRT 145 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L E +++ + +P ++P +V + + + +++EMI Sbjct: 146 DKVLIESAQTLGADDKTVLTQVILPSAVPPIVSGLKVGVGIALMCTISAEMIGSSS---- 201 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A D + ML + + + D + Sbjct: 202 --GLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVF 237 >gi|154246028|ref|YP_001416986.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154160113|gb|ABS67329.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 319 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 13/203 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ R+ + +A+++ +P+G+ +G I + P ++L PA + P+ + Sbjct: 127 ISCRRIFLGFALAALVAVPMGLLMGRYALIKEFVFPVCEVLRPIPAIAWVPMSIML---- 182 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + G + IL N + G + A + + + P + P Sbjct: 183 WPTNEQSIVFITFLGAFFPILLNTLHGMANVDEVLVRAARCLGASERATFLEVYFPAVLP 242 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG G AW + I +E+ S G+G + E+ +P++ LG++ + Sbjct: 243 QIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYPDIALGMITIGV 296 Query: 565 FVLA---LNRFLWHPLYLYGTRC 584 LA L R + + + Sbjct: 297 LGLASSFLIRLVGRAVTPWSRAK 319 Score = 111 bits (278), Expect = 4e-22, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 82/236 (34%), Gaps = 17/236 (7%) Query: 35 LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94 L P +++ + + + R+ ++ L L + Sbjct: 95 LYVRFLNVPSPEQVLESARTAFSTGTFFDHIVISCRRIFLGFALAALVAVPMGLLMGRYA 154 Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 + + P+ ++++ IP + ++ +++ + E + +F F + + + Sbjct: 155 LIKEFVFPVCEVLRPIPAIAWVPMSIMLW--------PTNEQSIVFITFLGAFFPILLNT 206 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 + N+ L +R S F + P +P + + + M W ++A+EMI Sbjct: 207 LHGMANVDEVLVRAARCLGASERATFLEVYFPAVLPQIFTGLTVGMGVAWVSLIAAEMIS 266 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWS 267 GIG + A I M+T+ + +L+ R + WS Sbjct: 267 G------QFGIGYFTWEAYSLVQYPDIALGMITIGVLGLASSFLIRLVGRAVTPWS 316 >gi|327481588|gb|AEA84898.1| binding-protein dependent transport system inner membrane protein [Pseudomonas stutzeri DSM 4166] Length = 301 Score = 132 bits (333), Expect = 2e-28, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 78/201 (38%), Gaps = 13/201 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + A ++ + G+ IG + P+ +L PA + PL + + Sbjct: 107 SLERIALAYAYAVVLGVLCGVLIGRSRWAEDILLPYIELFRPIPAVAWIPLAILMLPTEQ 166 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + G + I+ N + G P+ A S + ++++PG P Sbjct: 167 SS----IVFITFLGAFFPIVLNTVHGVEQTPDVLVRAARSLGASDRAILWHVVIPGAMPS 222 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 V G G AW + + E+ S + G+G + S +PE+++G+L + Sbjct: 223 IVAGLAIGMGVAWFSLLAGEIISGQY------GIGYFTWTSYTLVKYPEIIIGMLTIGGL 276 Query: 566 VLALNRFLWH---PLYLYGTR 583 + PL + + Sbjct: 277 GTLCTLLVRKACVPLLRWQQQ 297 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 104/270 (38%), Gaps = 21/270 (7%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINI----LLHGIQETTVPRDIVDIVPITLDVHSL 61 P ++ R + LLA VL+ + L + P + + L Sbjct: 41 RRLPPMAGRYLVRVLALLAAVLIWHLATATGFNLFINFENVPAPLLVGQTLIQQLGSSEF 100 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + + R+ A +++ + L +SR +L+P +++ + IP + ++ ++ Sbjct: 101 YLHIVHSLERIALAYAYAVVLGVLCGVLIGRSRWAEDILLPYIELFRPIPAVAWIPLAIL 160 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + + + +F F + + + + P L +RS S W Sbjct: 161 --------MLPTEQSSIVFITFLGAFFPIVLNTVHGVEQTPDVLVRAARSLGASDRAILW 212 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 ++ +P +MP +V + + M WF ++A E+I GIG + + I Sbjct: 213 HVVIPGAMPSIVAGLAIGMGVAWFSLLAGEIISG------QYGIGYFTWTSYTLVKYPEI 266 Query: 242 LYAMLTMLGVIFLYDQLLFR---PMIVWSN 268 + MLT+ G+ L L+ + P++ W Sbjct: 267 IIGMLTIGGLGTLCTLLVRKACVPLLRWQQ 296 >gi|241896063|ref|ZP_04783359.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Weissella paramesenteroides ATCC 33313] gi|241870711|gb|EER74462.1| glycine betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane/binding protein [Weissella paramesenteroides ATCC 33313] Length = 576 Score = 132 bits (333), Expect = 2e-28, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V I L ++ P I I ++ L T ++ + +IS++ Sbjct: 56 WLFIVGVTIFAALMFGKKWGFPLFTF-IGLIIVENQGLWTSMMNTFTLVIISSLISVIIG 114 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA Sbjct: 115 VPLGIWMAKNEVVNKIVQPILDFMQTMPAFVYLIPAVAFFG---IGVVPGVFASVIFA-- 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + +P DL E + SF +G QK + + +P + + + ++ Sbjct: 170 ---LPPTVRMANLGIRQVPNDLVEAADSFGSTGTQKLFKIELPLAKKTIFSGINQTLMLA 226 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A+++ D+ ++++ + + D+L Sbjct: 227 LSMVVVASMI-------GAPGLGRGVLAAVQDADIGKGFVNGISLVILAIVIDRL 274 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 77/233 (33%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + L I + + G W + + + T V++ +I+ I Sbjct: 53 IPTWLFIVGVTIFAALMFGKKWGFPLFTFIGLIIVENQGLWTSMMNTFTLVIISSLISVI 112 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ ++ +QP + PA V+ V+ + + Sbjct: 113 IGVPLGIWMAKNEVVNKIVQPILDFMQTMPAFVYLIPAVAFFGIGVVPGVFASVIF---- 168 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + G PND E A SF TG + I LP +G A + Sbjct: 169 ALPPTVRMANLGIRQVPNDLVEAADSFGSTGTQKLFKIELPLAKKTIFSGINQTLMLALS 228 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +V+ + GLG + + + + + + + + ++R Sbjct: 229 MVVVASMIG-------APGLGRGVLAAVQDADIGKGFVNGISLVILAIVIDRL 274 >gi|114765802|ref|ZP_01444895.1| taurine ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114541801|gb|EAU44838.1| taurine ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 421 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 15/200 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV+ ++I IP+G +G P + + P PLV+ Sbjct: 230 SLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + +G S A S + + R++I+P P Sbjct: 290 TGK----IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKAQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGA A G W + +E+ + G G I +++ V++G++++ Sbjct: 346 IFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASKFQLTDIVIMGIILIGVI 399 Query: 566 VLALNRFLWHPLYLYGTRCL 585 ++ + + + L Sbjct: 400 GFGIDILM-----RFAEKAL 414 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 81/214 (37%), Gaps = 17/214 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L ++ + R+++ L S PI++ M+ +P L + Sbjct: 221 STLWEHLGWSLFRVIAGFFFGALIGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPL 280 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++ GK I +F + +W M + + + + S S Q Sbjct: 281 VIIWAGIGETGK--------IILLFLAALWIMAIAARSGVSGVKISKVHAAYSLGASKAQ 332 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP S+P + ++M W VVA+E++ G G I +A K Q Sbjct: 333 IMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASKFQLT 386 Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 ++ ++ + + F D L+ + ++ W + Sbjct: 387 DIVIMGIILIGVIGFGIDILMRFAEKALVPWKGR 420 >gi|22126005|ref|NP_669428.1| inner membrane permease for ABC transporter [Yersinia pestis KIM 10] gi|45441867|ref|NP_993406.1| putative transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51596533|ref|YP_070724.1| ABC taurine/sulfonate transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108807630|ref|YP_651546.1| putative transport system permease [Yersinia pestis Antiqua] gi|108811909|ref|YP_647676.1| transport system permease [Yersinia pestis Nepal516] gi|145598157|ref|YP_001162233.1| transport system permease [Yersinia pestis Pestoides F] gi|149365800|ref|ZP_01887835.1| putative transport system permease [Yersinia pestis CA88-4125] gi|153949819|ref|YP_001400823.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|165927246|ref|ZP_02223078.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938542|ref|ZP_02227098.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010611|ref|ZP_02231509.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210486|ref|ZP_02236521.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400827|ref|ZP_02306333.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167424872|ref|ZP_02316625.1| ABC transporter , permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466995|ref|ZP_02331699.1| ABC transporter , permease protein [Yersinia pestis FV-1] gi|170024194|ref|YP_001720699.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|186895593|ref|YP_001872705.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|218929379|ref|YP_002347254.1| putative transport system permease [Yersinia pestis CO92] gi|229837803|ref|ZP_04457962.1| putative transport system permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229894962|ref|ZP_04510140.1| putative transport system permease [Yersinia pestis Pestoides A] gi|229898364|ref|ZP_04513511.1| putative transport system permease [Yersinia pestis biovar Orientalis str. India 195] gi|229902209|ref|ZP_04517330.1| putative transport system permease [Yersinia pestis Nepal516] gi|270490685|ref|ZP_06207759.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|21958952|gb|AAM85679.1|AE013814_7 putative inner membrane permease for ABC transporter [Yersinia pestis KIM 10] gi|45436729|gb|AAS62283.1| putative transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51589815|emb|CAH21447.1| putative ABC taurine/sulfonate transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108775557|gb|ABG18076.1| transport system permease [Yersinia pestis Nepal516] gi|108779543|gb|ABG13601.1| putative transport system permease [Yersinia pestis Antiqua] gi|115347990|emb|CAL20915.1| putative transport system permease [Yersinia pestis CO92] gi|145209853|gb|ABP39260.1| transport system permease [Yersinia pestis Pestoides F] gi|149292213|gb|EDM42287.1| putative transport system permease [Yersinia pestis CA88-4125] gi|152961314|gb|ABS48775.1| ABC transporter , permease protein [Yersinia pseudotuberculosis IP 31758] gi|165913416|gb|EDR32037.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920914|gb|EDR38162.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990313|gb|EDR42614.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207666|gb|EDR52146.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167049680|gb|EDR61088.1| ABC transporter , permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056059|gb|EDR65837.1| ABC transporter , permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750728|gb|ACA68246.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|186698619|gb|ACC89248.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|229681105|gb|EEO77200.1| putative transport system permease [Yersinia pestis Nepal516] gi|229688654|gb|EEO80723.1| putative transport system permease [Yersinia pestis biovar Orientalis str. India 195] gi|229694169|gb|EEO84216.1| putative transport system permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702057|gb|EEO90078.1| putative transport system permease [Yersinia pestis Pestoides A] gi|262362187|gb|ACY58908.1| putative transport system permease [Yersinia pestis D106004] gi|262365521|gb|ACY62078.1| putative transport system permease [Yersinia pestis D182038] gi|270339189|gb|EFA49966.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|320014943|gb|ADV98514.1| putative transport system permease [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 273 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + ++ +++RV++ +I +++ +P+G+W+G + + P Q L P Sbjct: 65 LMWSLSGELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPP 124 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + N L+ G + IL N IAG + A + Sbjct: 125 IAYIPLAMLWFGLG----NPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQ 180 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 +R IILP PY +TG G A+ IV+E+ + +G+G I E+ E Sbjct: 181 ATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIA------VNSGVGYRILEAREYM 234 Query: 551 SFPEVVLGVLIMCCFVLALN 570 +V+ G+ + L ++ Sbjct: 235 WSDKVIAGMFTIGFLGLVID 254 Score = 111 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 78/212 (36%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L A + R++ +I L S+ ++ P++ ++ IP + ++ Sbjct: 71 GELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPL 130 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P A F I + + + + N+ +R+ Sbjct: 131 AMLWFGLGNPP--------AFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQAT 182 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P ++ M + + + V+ +EMI V G+G I A + Sbjct: 183 MFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNS------GVGYRILEAREYMWS 236 Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267 ++ M T+ + + D L R ++ W Sbjct: 237 DKVIAGMFTIGFLGLVIDLCMDRLNRRLLRWH 268 >gi|144898341|emb|CAM75205.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Magnetospirillum gryphiswaldense MSR-1] Length = 172 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 14/170 (8%) Query: 90 AAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWN 149 +S+ L PI +++++P L +L ++ F P +AIF IF + VW Sbjct: 8 IGQSKLAMRALDPIFQVLRTVPPLAWLPISLAAFKAADP--------SAIFVIFITSVWP 59 Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + + + NIP+D V+ RLS + F + +P S+P + + + + W +VA Sbjct: 60 IILNTAVGVRNIPQDYRNVAAVLRLSPLEFFAKIAMPASVPYIFTGLKIGIGLSWLAIVA 119 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 +EM++ G GIG +I A + I+ A++ + V F D+L+ Sbjct: 120 AEMLIGGV------GIGFFIWDAWNSSLMSEIILALVYVGLVGFALDRLI 163 Score = 130 bits (328), Expect = 6e-28, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 10/166 (6%) Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 IG + P Q+L P + P+ ++ + ++ + W I+ N Sbjct: 8 IGQSKLAMRALDPIFQVLRTVPPLAWLPISLAAFKAADPS----AIFVIFITSVWPIILN 63 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 G P D++ VA+ ++ ++ I +P PY TG G +W A + +E+ Sbjct: 64 TAVGVRNIPQDYRNVAAVLRLSPLEFFAKIAMPASVPYIFTGLKIGIGLSWLAIVAAEML 123 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G G+G +I ++ E++L ++ + AL+R + Sbjct: 124 IGG------VGIGFFIWDAWNSSLMSEIILALVYVGLVGFALDRLI 163 >gi|298693438|gb|ADI96660.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED133] gi|323440153|gb|EGA97867.1| ABC transporter permease [Staphylococcus aureus O11] gi|323443616|gb|EGB01230.1| ABC transporter permease [Staphylococcus aureus O46] Length = 253 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFVVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F I+FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFP----IVFNTIKGVRDIEPQYLKIAANLYLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 93/218 (42%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + + + Q+ + + R ++ V++L+ L ++R L + Sbjct: 37 LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALVVAIPLGFLLGRNRWLYNAIE 96 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ +++ I + + F V++F L AI IF + + + F+ + + +I Sbjct: 97 PLFQLIRPISPIAWAPFVVLWFGIG--------SLPAIAIIFIAAFFPIVFNTIKGVRDI 148 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +++ + L+GW + + P + ++ + M++ W F+V+ EMI Sbjct: 149 EPQYLKIAANLYLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A +L +L A+ + F+ D+ + Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240 >gi|75674870|ref|YP_317291.1| binding-protein dependent transport system inner membrane protein [Nitrobacter winogradskyi Nb-255] gi|74419740|gb|ABA03939.1| Binding-protein-dependent transport systems inner membrane component [Nitrobacter winogradskyi Nb-255] Length = 275 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 112/279 (40%), Gaps = 17/279 (6%) Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 L++ + R + + L + +S L +++ + + + + ++ + Sbjct: 2 LTDAPAEPRRIVSLPNGFRSAALSVLIAAASLSAGLLFWYWATLTSLDFYVRFDNVPTPI 61 Query: 369 N--HFTYQDVL--YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + + ++ + ++ R+ + +AS + I +G+ +G + I P+ ++ Sbjct: 62 QVANAFWHELGDKRFYFHILYSLRRIAIAYALASALGIGLGLAVGRSRLARAVILPYVEI 121 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + PA + PL + + + + G + IL N I G P A Sbjct: 122 IRPIPAVAWIPLAILMWPTEESS----IIYITALGAMFPILLNTIHGVEQTPEILVRAAQ 177 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S + +++++LP P+ VTG G +W + + E+ S + G+G + Sbjct: 178 SLGASRLAIFQHVVLPSALPHIVTGLAIGMGVSWFSLLAGEIISGQY------GIGYFTW 231 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + +PE+V+G++++ A R L PL + Sbjct: 232 NAYSLILYPEIVVGMIVIGLLGTASTHAVRLLTRPLLAW 270 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 86/236 (36%), Gaps = 17/236 (7%) Query: 35 LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94 P + + L + + R+ A ++ +SR Sbjct: 50 FYVRFDNVPTPIQVANAFWHELGDKRFYFHILYSLRRIAIAYALASALGIGLGLAVGRSR 109 Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 V++P ++I++ IP + ++ ++ + E + I+ ++ + + Sbjct: 110 LARAVILPYVEIIRPIPAVAWIPLAILMW--------PTEESSIIYITALGAMFPILLNT 161 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 + P L ++S S F ++ +P ++P +V + + M WF ++A E+I Sbjct: 162 IHGVEQTPEILVRAAQSLGASRLAIFQHVVLPSALPHIVTGLAIGMGVSWFSLLAGEIIS 221 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL---YDQLLFRPMIVWS 267 GIG + A I+ M+ + + +LL RP++ W Sbjct: 222 G------QYGIGYFTWNAYSLILYPEIVVGMIVIGLLGTASTHAVRLLTRPLLAWQ 271 >gi|256811246|ref|YP_003128615.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus fervens AG86] gi|256794446|gb|ACV25115.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus fervens AG86] Length = 256 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 18/212 (8%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +I I++ RV+ ++AS++ IP+GI +G +++ ++L P + PL Sbjct: 54 GSLIGNTIISIKRVLSGFLLASVVAIPLGILMGHYRVVNNFCDALIEVLRPIPPLAWVPL 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ ++ + + F IL N I+G P E A + G Sbjct: 114 SLAWFGLGEMSMIFIIFIGAFFP----ILINTISGVKGVPTPLIEAALTLGAKGKDILIK 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++P P +TG G AW + +E+ GLG I + V+ Sbjct: 170 VVIPASSPSILTGLRVGAGIAWMCVVAAEMLPS-----SNAGLGYLIMYAYSLSRMDVVI 224 Query: 557 LGVLIMCCFVLALNR---------FLWHPLYL 579 ++I+ L L+R F+W + Sbjct: 225 ACMIIIGLIGLVLDRGLRYIEDKYFVWRKMMK 256 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 82/204 (40%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L SL + R+LS +++ + L R + ++++++ IP L + Sbjct: 51 LGTGSLIGNTIISIKRVLSGFLLASVVAIPLGILMGHYRVVNNFCDALIEVLRPIPPLAW 110 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + ++ +F E++ IF IF + + + + +P L E + + Sbjct: 111 VPLSLAWFGLG--------EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAK 162 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 G + +P S P ++ + + W VVA+EM+ + G+G I A Sbjct: 163 GKDILIKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPSSNA-----GLGYLIMYAYSL 217 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ M+ + + + D+ L Sbjct: 218 SRMDVVIACMIIIGLIGLVLDRGL 241 >gi|148642351|ref|YP_001272864.1| nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC [Methanobrevibacter smithii ATCC 35061] gi|148551368|gb|ABQ86496.1| nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC [Methanobrevibacter smithii ATCC 35061] Length = 246 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+F+V +I+ASI+ IP+GI +G+ + + +L P + P + Sbjct: 60 TLFKVFGGMILASIVAIPLGILLGWYSKLETLCSFVISILRPIPPIAWIPFSILWFGIGT 119 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ G + IL I G E A + +ILP P Sbjct: 120 A----PAIFIIFIGCVFPILIYTIDGVKRTDKVLIESAQTLGADDKTVLTQVILPSAVPP 175 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 V+G G A +I +E+ ++GLG I +T V+G+L++ Sbjct: 176 IVSGLKVGVGIALMCTISAEMIG------SSSGLGYLILTATNLFDTGTTVVGMLVIGLI 229 Query: 566 VLALNRFL 573 L L+ Sbjct: 230 GLILDYVF 237 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 79/218 (36%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + + L T ++ M+++ + L +L + Sbjct: 34 LPSPGSVCNSAWNIIQSGKLFVDTMDTLFKVFGGMILASIVAIPLGILLGWYSKLETLCS 93 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 ++ I++ IP + ++ F++++F AIF IF V+ + + Sbjct: 94 FVISILRPIPPIAWIPFSILWFGIG--------TAPAIFIIFIGCVFPILIYTIDGVKRT 145 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L E +++ + +P ++P +V + + + +++EMI Sbjct: 146 DKVLIESAQTLGADDKTVLTQVILPSAVPPIVSGLKVGVGIALMCTISAEMIGSSS---- 201 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A D + ML + + + D + Sbjct: 202 --GLGYLILTATNLFDTGTTVVGMLVIGLIGLILDYVF 237 >gi|307132314|ref|YP_003884330.1| glycine betaine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306529843|gb|ADM99773.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 406 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 L + I+ L Q ++ + ++ + + A T +L+A+ + Sbjct: 150 LTGLPAPVAILVFSLLAWQVSSFGMGVATLLSLVAIGAIGAWSQAMVTLALVLTALFFCV 209 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 210 IIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFG---IGNVPGVVVTIIF 266 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E ++SF S Q + + +P +MP ++ + ++ Sbjct: 267 A-----LPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTL 321 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 322 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 372 Score = 96.9 bits (240), Expect = 9e-18, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 86/235 (36%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L V V +AWQ + + T ++ + +G +T+ V+ + Sbjct: 149 LLTGLPAPVAILVFSLLAWQVSSFGMGVATLLSLVAIGAIGAWSQAMVTLALVLTALFFC 208 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 II +P+GIW+ + ++P + PA V+ +V N+ ++ I Sbjct: 209 VIIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGIG----NVPGVVVTI 264 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G P D E A SF + + + LP P + G A Sbjct: 265 IFALPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 324 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 325 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 372 >gi|258424287|ref|ZP_05687168.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A9635] gi|257845553|gb|EEV69586.1| binding-protein-dependent transport system inner membrane component [Staphylococcus aureus A9635] Length = 253 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I+++R V ++A ++ IP+G +G + + I+P QL+ + P Sbjct: 54 GEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPF 113 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 VV L + + F FN I G + ++A++ ++TGW +R Sbjct: 114 VVLWFGIGSLPAIAIIFIAAFFPIA----FNTIKGVRDIEPQYLKIAANLNLTGWSLYRN 169 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+ PG F + G A G +W + E+ +GLG I ++ + +V+ Sbjct: 170 ILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------AQSGLGFLIVDARNMLNLEDVL 223 Query: 557 LGVLIMCCFVLALNRFL 573 + + F ++RF+ Sbjct: 224 AAIFFIGLFGFIIDRFI 240 Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + + + Q+ + + R ++ V++LL L ++R L + Sbjct: 37 LPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIE 96 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ +++ I + + F V++F L AI IF + + + F+ + + +I Sbjct: 97 PLFQLIRPISPIAWAPFVVLWFGIG--------SLPAIAIIFIAAFFPIAFNTIKGVRDI 148 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +++ + L+GW + + P + ++ + M++ W F+V+ EMI Sbjct: 149 EPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIG------A 202 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A +L +L A+ + F+ D+ + Sbjct: 203 QSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI 240 >gi|222054757|ref|YP_002537119.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221564046|gb|ACM20018.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 263 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 79/192 (41%), Gaps = 10/192 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ RV+ IA+++ + +GI IG + Q++ P + PL + Sbjct: 67 GISVLRVLEGFGIAALLGLSLGIAIGLSRTLDRLTDLVIQVIKPIPPIAWIPLAILWFGI 126 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ G + ++ N I G + F EVA + ++ +++PG Sbjct: 127 GEQSK----VYIIFLGAFFPVIINTIDGIRQTDHKFVEVARILEVPRRKFIGQMVIPGAL 182 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG AW + +E+ + ++G+G I ++ + V++G++ + Sbjct: 183 PAIMTGIRIGLMVAWMCVVAAELIA------ASSGIGYLIMDARQLSQSDVVLVGMITIG 236 Query: 564 CFVLALNRFLWH 575 ++ L Sbjct: 237 VIGKLMDSVLKR 248 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 97/252 (38%), Gaps = 18/252 (7%) Query: 23 LAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +A ++V + L + P I L + ++ + LR+L I+ L Sbjct: 23 VAILVVWQALFQLGYIKPIILPPPSRIALTFLDLLKSGEMAKHLGISVLRVLEGFGIAAL 82 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 SR L + ++ +++ IP + ++ +++F E + ++ Sbjct: 83 LGLSLGIAIGLSRTLDRLTDLVIQVIKPIPPIAWIPLAILWFGIG--------EQSKVYI 134 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF + + + + EV+R + + + +P ++P ++ + + + Sbjct: 135 IFLGAFFPVIINTIDGIRQTDHKFVEVARILEVPRRKFIGQMVIPGALPAIMTGIRIGLM 194 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 W VVA+E+I GIG I A + +L M+T+ + L D +L R Sbjct: 195 VAWMCVVAAELIAASS------GIGYLIMDARQLSQSDVVLVGMITIGVIGKLMDSVLKR 248 Query: 262 ---PMIVWSNKF 270 +I W F Sbjct: 249 LEKRLISWRISF 260 >gi|269119112|ref|YP_003307289.1| binding-protein-dependent transporters inner membrane component [Sebaldella termitidis ATCC 33386] gi|268612990|gb|ACZ07358.1| binding-protein-dependent transport systems inner membrane component [Sebaldella termitidis ATCC 33386] Length = 275 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 80/201 (39%), Gaps = 10/201 (4%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I++ RV+ I I+ + +G +G + + P + PL Sbjct: 75 GQIFQDVLISLSRVMQGYGIGLILGVFMGTLMGISGSTNKFFSGTFDAIRQIPPLAWIPL 134 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V+ + +L+ + + IL N I+G + P + EVA ++ W+ +R Sbjct: 135 VILWFGIGETSK----VILIAKASFFPILLNTISGIKSTPKAYIEVAKLYNKNSWKIFRQ 190 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I LP P G AW I +E+ + T+G+G I ++ V+ Sbjct: 191 IYLPYALPNIFVGLRLGLSSAWMTVIAAELIA------STSGIGYRINDARNLLQSDVVI 244 Query: 557 LGVLIMCCFVLALNRFLWHPL 577 G++++ + ++R L L Sbjct: 245 TGIIVVGLLGVIMDRILDRIL 265 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 101/258 (39%), Gaps = 24/258 (9%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV------HSLPQYASRTTLR 71 IF+ +A ++I +I + E P + I + + + Q + R Sbjct: 29 GIFNYIALPVII-VIFWISATKNELFSPVILPSIAMVFTSLISQISSGQIFQDVLISLSR 87 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ++ I L+ TL S D ++ IP L ++ +++F KV Sbjct: 88 VMQGYGIGLILGVFMGTLMGISGSTNKFFSGTFDAIRQIPPLAWIPLVILWFGIGETSKV 147 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 I A+ F + + + + P+ EV++ + + W+ F + +P+++P Sbjct: 148 ILIAKASFF--------PILLNTISGIKSTPKAYIEVAKLYNKNSWKIFRQIYLPYALPN 199 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + + +S W V+A+E+I GIG I A ++ ++ + + Sbjct: 200 IFVGLRLGLSSAWMTVIAAELIA------STSGIGYRINDARNLLQSDVVITGIIVVGLL 253 Query: 252 IFLYDQLL---FRPMIVW 266 + D++L R + W Sbjct: 254 GVIMDRILDRILRELTPW 271 >gi|83590814|ref|YP_430823.1| binding-protein dependent transport system inner membrane protein [Moorella thermoacetica ATCC 39073] gi|83573728|gb|ABC20280.1| Binding-protein-dependent transport systems inner membrane component [Moorella thermoacetica ATCC 39073] Length = 266 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 14/210 (6%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 Y++ I++ RV + IA I +P+G+ + P +++ ++PF ++ P + PL Sbjct: 63 GYLLKHVLISLARVGLGFTIAVAIGVPLGLAMALVPLVNNLVEPFVRIFGPIPGIAWVPL 122 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + ++ G+ + +L N G E A + W+ Sbjct: 123 AILWFGLGDK----AAIFIITMGSVFPVLINTYQGMKDVDQTLIEAARTMGAGPWQLLSR 178 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILP + PY VTG G AW I +E+ + GLG + G + Sbjct: 179 VILPSLIPYLVTGFRVGLGFAWRVVIAAEMVGVPN------GLGYMLGVGRGTGRTDITI 232 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 + ++++ +L + ++ PL R R Sbjct: 233 ITMVVLGAIMLVVEELIFAPL----ERRTR 258 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 109/267 (40%), Gaps = 22/267 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILL--------HGIQETTVPRDIVDIVPITLDVHSLPQY 64 +R++ + L F+L+ +I + + P I+ + TL L ++ Sbjct: 9 QRLWQGVLALSVFILIWYTASITGLFGRVPRDYSLLLLPPPGKILVTIFETLVSGYLLKH 68 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R+ I++ A + ++ P + I IP + ++ +++F Sbjct: 69 VLISLARVGLGFTIAVAIGVPLGLAMALVPLVNNLVEPFVRIFGPIPGIAWVPLAILWFG 128 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + AAIF I V+ + + YQ + ++ + L E +R+ WQ + Sbjct: 129 LG--------DKAAIFIITMGSVFPVLINTYQGMKDVDQTLIEAARTMGAGPWQLLSRVI 180 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +P LV + + W V+A+EM+ V + G+G + + + Sbjct: 181 LPSLIPYLVTGFRVGLGFAWRVVIAAEMVGVPN------GLGYMLGVGRGTGRTDITIIT 234 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFR 271 M+ + ++ + ++L+F P+ + +R Sbjct: 235 MVVLGAIMLVVEELIFAPLERRTRFWR 261 >gi|256393443|ref|YP_003115007.1| sulfate ABC transporter permease [Catenulispora acidiphila DSM 44928] gi|256359669|gb|ACU73166.1| binding-protein-dependent transport systems inner membrane component [Catenulispora acidiphila DSM 44928] Length = 441 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 99/255 (38%), Gaps = 13/255 (5%) Query: 13 RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 R ++P + +L V V ++ + + + P ++ + + Sbjct: 189 RAVYPPVLAILLIVAVWQVLYVAKIWPDWKLPGPSEVFTSLKGAFSSGDAWPSVGHSVEH 248 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 S+ L + R + L PIL +QS+P + ++ +++F Sbjct: 249 GAIGFGASVAIGTPLGLLVGRVRAVRAGLGPILSGLQSLPSVAWVPPALMFF-------- 300 Query: 132 IGAELAAIFAIFTSQVWN-MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 G + A ++A+ + ++ + L +P V R+ G Y+ +P ++P Sbjct: 301 -GPKPAMLYAVVLAGAVPSISVGVVSGLDQVPPLYLRVGRNLGARGLASVRYVLLPAALP 359 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 G + + + W ++A+E+IV + +G + A D+ A++ +L Sbjct: 360 GYLAGLRQGWAFSWRSLLAAEIIVESADLGHS--LGFLLKNAQDSNDMAGAFAAIVLILA 417 Query: 251 VIFLYDQLLFRPMIV 265 V +QL+F P+ Sbjct: 418 VGVAVNQLVFVPLER 432 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 86/267 (32%), Gaps = 12/267 (4%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 L H + + + + V + + W + + Sbjct: 172 ALETSPVHETGWLVAVLRAVYPPVLAILLIVAVWQVLYVAKIWPDWKLPGPSEVFTSLKG 231 Query: 379 VIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 G ++ + + I P+G+ +G + + + P L + P+ Sbjct: 232 AFSSGDAWPSVGHSVEHGAIGFGASVAIGTPLGLLVGRVRAVRAGLGPILSGLQSLPSVA 291 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + P + L +++ G I V++G P + V + G Sbjct: 292 WVPPALMFFG----PKPAMLYAVVLAGAVPSISVGVVSGLDQVPPLYLRVGRNLGARGLA 347 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 RY++LP P Y+ G +W + + +E+ + LG + + + Sbjct: 348 SVRYVLLPAALPGYLAGLRQGWAFSWRSLLAAEIIVESADLGHS--LGFLLKNAQDSNDM 405 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYL 579 ++++ +A+N+ ++ PL Sbjct: 406 AGAFAAIVLILAVGVAVNQLVFVPLER 432 >gi|77459517|ref|YP_349024.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77383520|gb|ABA75033.1| putative integral membrane transport protein [Pseudomonas fluorescens Pf0-1] Length = 279 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 18/268 (6%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 +L P RR+ LL + + I+ I + P +I + L +L ++ Sbjct: 20 LLNPLWRRRLKGLALPLLIVIALEFIVRIGWLPSYQMPAPSEIALTLT-DLAEGALWKHI 78 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + +R+L I V+A SR L P ++SIP L ++ +++ Sbjct: 79 GASLIRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAALRSIPSLAWVPLLLLWLGI 138 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 E + I I + + ++ ++ NI R L EV + S Q + + Sbjct: 139 D--------ETSKIVLIAIGAFFPVYVNVVAAIRNIDRKLVEVGHIYGFSPLQLVRRILL 190 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++PGL + MS W F+VA+E+I G+G ++ + +L A+ Sbjct: 191 PAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAI 244 Query: 246 LTMLGVIFLYDQLLF---RPMIVWSNKF 270 + + + L D LL R +VW + F Sbjct: 245 IVLALLGKLSDGLLAILERRWLVWRDAF 272 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 92/265 (34%), Gaps = 12/265 (4%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 + +L + + + +L + + + ++Q Sbjct: 4 DLPARLALSAPRRKLPLLNPLWRRRLKGLALPLLIVIALEFIVRIGWLPSYQMPAPSEIA 63 Query: 371 FTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 T D+ ++ RV++ I + + + W+G + ++P L + Sbjct: 64 LTLTDLAEGALWKHIGASLIRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAALRSI 123 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P+ + PL++ + + +L+ G + + NV+A EV + Sbjct: 124 PSLAWVPLLLLWLGIDETSK----IVLIAIGAFFPVYVNVVAAIRNIDRKLVEVGHIYGF 179 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + + R I+LP P TG + +W + +E+ + T GLG +++ E Sbjct: 180 SPLQLVRRILLPAALPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRE 233 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 V+ ++++ + L Sbjct: 234 TSRPDIVLAAIIVLALLGKLSDGLL 258 >gi|83951958|ref|ZP_00960690.1| glycine betaine/proline ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83836964|gb|EAP76261.1| glycine betaine/proline ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 660 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 90/545 (16%), Positives = 178/545 (32%), Gaps = 52/545 (9%) Query: 10 FISRRIFPNI--FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 F +R +PNI A ++ L G + + + + A + Sbjct: 96 FYGKRRWPNIGPIPWTAIAASAAVLGYYLGGWRFAL----LAGGTFVWTALIGQWDIAMQ 151 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T ++ A + + LA K ++ PIL ++Q++P +L V++F Sbjct: 152 TMSVLVVAAPFAFVIGLTLGILAWKFHGFERMIKPILSVLQTLPFFTYLLPAVIFFKV-- 209 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G GA I+AI M L + ++ E + + WQ + VP Sbjct: 210 -GPTAGAVATIIYAIP-----PMVLMTTLGLKKVSPEVVEAGKMSGCTRWQMLSRVYVPS 263 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + ++ + ++ +VV I +PG+G+ + + L +T Sbjct: 264 ARTEILVGLNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSFEIGVT 316 Query: 248 MLGVIFLYDQLL----------FRPMIVWSNKFRLERTTGIYPADSWVLY--------LF 289 ++ + + D+L F W + +L + Sbjct: 317 IVLLAIMLDRLSKAWVVKQPEHFERGTPWWKRHIYLLAGVGGFVLFLLLSQVIEVFAEIG 376 Query: 290 RKTNFLRF--IGYSSWNFFSP-LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346 R+ +F + I NF + V R ++ P L ++ + Sbjct: 377 RRQHFSQGKEIDNIIKNFLALEAVRGVTDWLRWFLNVKILIPFRDALLWVPTPAFVLVIV 436 Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 + V G GI IV + D IT++ V+ +I+A+++ IP+GI Sbjct: 437 AFAYGVGGRKPGIYAAVFFTIVAFSGWWD------RSVITLYTVISAVILATLLGIPLGI 490 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 S ++ FP+ ++ + + + + + Y Sbjct: 491 AAARSEKWSKRVLLACDTAQTFPSFIYLIPAIMLFGVNDVAVVFSILIFAMVPLCRY--- 547 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 + G + P + E A T + R + LP P G A A+ I++ Sbjct: 548 -TVEGLRSVPPEMTESADMSGATRRQKMRSVQLPIALPTMAVGFNQAIIFAFFMVIIAAF 606 Query: 527 ASWGH 531 Sbjct: 607 IGTQD 611 Score = 80.0 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 78/202 (38%), Gaps = 19/202 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T ++SA++++ L AA+S + ++ D Q+ P +L ++ F Sbjct: 470 TLYTVISAVILATLLGIPLGIAAARSEKWSKRVLLACDTAQTFPSFIYLIPAIMLFGVN- 528 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 ++A +F+I + + + L ++P ++ E + + QK + +P Sbjct: 529 -------DVAVVFSILIFAMVPLCRYTVEGLRSVPPEMTESADMSGATRRQKMRSVQLPI 581 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + ++ +F V+ + I D +G + + ++ + Sbjct: 582 ALPTMAVGFNQAIIFAFFMVIIAAFIGTQD-------LGQELQRTLAGTEMGKNFVLGMN 634 Query: 248 MLGVIFLYDQLLFRPMIVWSNK 269 + + +D + W+ K Sbjct: 635 VSLMALTFDLAI----SSWAEK 652 >gi|111074973|gb|ABH04834.1| ABC-type transporter permease component [Heliobacillus mobilis] Length = 248 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 10/184 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++ + +I+A + IP+G+ +G++ + ++P LL P V+ P ++ + + Sbjct: 57 SIYLLTSGLILALLTAIPLGLLVGWQRRLHQAVEPLTNLLGPIPPIVYIPYTIALLPTFT 116 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ ++ G W + N +AG A + A + ++ W ++LPG P+ Sbjct: 117 LS----SIFVIFIGAFWPLFINTVAGVQAVEKGLIDSARTLGVSRWTMLTRVLLPGALPH 172 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 ++G + A+ +E+ T+GLG Y+ ++ +P VV G+L++ Sbjct: 173 ILSGGSISLVLAFILLTAAEMIG------ATSGLGWYVKYFSDFADYPRVVAGILVIGIV 226 Query: 566 VLAL 569 VL L Sbjct: 227 VLLL 230 Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 80/188 (42%), Gaps = 14/188 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + + S ++++LL L RRL + P+ +++ IP + ++ +T+ Sbjct: 57 SIYLLTSGLILALLTAIPLGLLVGWQRRLHQAVEPLTNLLGPIPPIVYIPYTIALL---- 112 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 L++IF IF W + + + + + L + +R+ +S W + +P Sbjct: 113 ----PTFTLSSIFVIFIGAFWPLFINTVAGVQAVEKGLIDSARTLGVSRWTMLTRVLLPG 168 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P ++ +S+ + + A+EMI G+G Y+ D ++ +L Sbjct: 169 ALPHILSGGSISLVLAFILLTAAEMIG------ATSGLGWYVKYFSDFADYPRVVAGILV 222 Query: 248 MLGVIFLY 255 + V+ L Sbjct: 223 IGIVVLLL 230 >gi|149912652|ref|ZP_01901186.1| taurine ABC transporter, permease protein [Roseobacter sp. AzwK-3b] gi|149813058|gb|EDM72884.1| taurine ABC transporter, permease protein [Roseobacter sp. AzwK-3b] Length = 421 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 10/190 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+V +++ IP+G +G P + + P PLV+ Sbjct: 230 SLVRVIVGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + AG S A S + W+ RY+I+P P Sbjct: 290 TGK----IILLFLAALWIMTIAARAGVSGVAISKVHAAYSLGASKWQLMRYVIMPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGA A G W + +E+ + G G I ++ V++G++++ Sbjct: 346 IFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASRFQLTDIVLMGIILIGVI 399 Query: 566 VLALNRFLWH 575 ++ + Sbjct: 400 GYGIDILMRK 409 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 17/213 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L ++ + +R++ L S PI++ M+ +P L + Sbjct: 222 TLWEHLYWSLVRVIVGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLV 281 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ GK I +F + +W MT + + + + S S WQ Sbjct: 282 IIWAGIGETGK--------IILLFLAALWIMTIAARAGVSGVAISKVHAAYSLGASKWQL 333 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 Y+ +P S+P + ++M W VVA+E++ G G I +A + Q Sbjct: 334 MRYVIMPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASRFQLTD 387 Query: 240 AILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269 +L ++ + + + D L+ + ++ W + Sbjct: 388 IVLMGIILIGVIGYGIDILMRKAEKWLVPWKGR 420 >gi|91774063|ref|YP_566755.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit [Methanococcoides burtonii DSM 6242] gi|91713078|gb|ABE53005.1| ABC transporter permease protein [Methanococcoides burtonii DSM 6242] Length = 262 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 81/210 (38%), Gaps = 10/210 (4%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + + + ++ + I+ A ++ IP+G+ +G+ +++ + P ++ Sbjct: 45 DVLFAFIKIIEGGILFTDLATSLLHFGIGILFALLVGIPIGVVMGWFKNVNHALDPLIEI 104 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + P + P + H + ++ G + ++ N G + P + E A Sbjct: 105 IRPIPPLAWIPFAIVWFGLTHTS----AGFVVFIGAVFPVIINTFDGFKSVPKFYVEAAK 160 Query: 485 SFH-ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++ R++ LP P +G + G W + +E+ + TTGLG I Sbjct: 161 VLGCMSSGSLIRHVALPSAMPSIASGIRISMGVGWMCLVAAEMFG-----VSTTGLGYKI 215 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 V++ +LI+ L ++R Sbjct: 216 WWHYYLHQMDFVLVYMLILGFLGLFIDRLF 245 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 96/236 (40%), Gaps = 15/236 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML-SAMVISLLFTF 84 +++ ++ L+ + V I + + T+L ++ +LL Sbjct: 23 IVLWQLVADLVVNNKFILPSFTDVLFAFIKIIEGGILFTDLATSLLHFGIGILFALLVGI 82 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + + + L P+++I++ IP L ++ F +V+F +A F +F Sbjct: 83 PIGVVMGWFKNVNHALDPLIEIIRPIPPLAWIPFAIVWFGL--------THTSAGFVVFI 134 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFR-LSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 V+ + + + ++P+ E ++ +S ++ +P +MP + + +SM G Sbjct: 135 GAVFPVIINTFDGFKSVPKFYVEAAKVLGCMSSGSLIRHVALPSAMPSIASGIRISMGVG 194 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W +VA+EM V T G+G I + +L ML + + D+L Sbjct: 195 WMCLVAAEMFGVSTT-----GLGYKIWWHYYLHQMDFVLVYMLILGFLGLFIDRLF 245 >gi|171741918|ref|ZP_02917725.1| hypothetical protein BIFDEN_01017 [Bifidobacterium dentium ATCC 27678] gi|283457058|ref|YP_003361622.1| ABC transporter permease [Bifidobacterium dentium Bd1] gi|306824033|ref|ZP_07457406.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|309800758|ref|ZP_07694893.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|171277532|gb|EDT45193.1| hypothetical protein BIFDEN_01017 [Bifidobacterium dentium ATCC 27678] gi|283103692|gb|ADB10798.1| Permease protein of ABC transporter system [Bifidobacterium dentium Bd1] gi|304552686|gb|EFM40600.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|308222603|gb|EFO78880.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 275 Score = 131 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV +A++I +P+G+ +G S+ ++P L+ P + PL + + Sbjct: 78 YASLVRVFSGFGLAALIGVPLGVLMGRSKIASAMLEPTINLIRPIPVTAWVPLTLIMIGI 137 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+ + I+ N + P E A+ + + ++ P Sbjct: 138 GDRS----TIFLVFLAALFPIILNTVTAVEQVPERLLEAAAMLGTSKGKALWKVVFPAAL 193 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G AW +V E+ T GLGA I E+ +V G+ I+ Sbjct: 194 PGIIGGLRVAVGLAWALLVVGEMTGI------TVGLGAMITEAKNVSKTDLIVAGMFIIG 247 Query: 564 CFVLALNRFL 573 +R + Sbjct: 248 ILGFLSDRLI 257 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 86/201 (42%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L ++ + +R+ S ++ L L +S+ +L P +++++ IP+ ++ Sbjct: 71 AMLWKHTYASLVRVFSGFGLAALIGVPLGVLMGRSKIASAMLEPTINLIRPIPVTAWVPL 130 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 T++ + + IF +F + ++ + + ++ +P L E + S + Sbjct: 131 TLIMIGIG--------DRSTIFLVFLAALFPIILNTVTAVEQVPERLLEAAAMLGTSKGK 182 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 W + P ++PG++ + +++ W +V EM G+G+ I A Sbjct: 183 ALWKVVFPAALPGIIGGLRVAVGLAWALLVVGEM------TGITVGLGAMITEAKNVSKT 236 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ M + + FL D+L+ Sbjct: 237 DLIVAGMFIIGILGFLSDRLI 257 >gi|260550615|ref|ZP_05824824.1| taurine transporter [Acinetobacter sp. RUH2624] gi|260406326|gb|EEW99809.1| taurine transporter [Acinetobacter sp. RUH2624] Length = 289 Score = 131 bits (331), Expect = 3e-28, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 88 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW++ +P ++P ++ + + + GW +VA+E++ GIG + A + Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274 >gi|163761175|ref|ZP_02168251.1| Binding-protein-dependent transport systems inner membrane component [Hoeflea phototrophica DFL-43] gi|162281514|gb|EDQ31809.1| Binding-protein-dependent transport systems inner membrane component [Hoeflea phototrophica DFL-43] Length = 278 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 10/189 (5%) Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 + ++ R++ ++IA + +PVGI IG + Q L + P+ V Sbjct: 84 MTLPSLERIMHGMLIAIALGVPVGILIGRFGFLREITNIPFQFLRMISPLSWMPIAVMAF 143 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 + + + L+ W ILF+ AG D+ +VA + W IILP Sbjct: 144 ATWDG----AIVFLIAVAAVWPILFSTAAGLRRVEPDWFKVARNLGARPWHMLFTIILPA 199 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 I +TG A G AW + +E T+GLG I ++ + + + V+I Sbjct: 200 ISQDILTGIRLALGVAWIVLVPAEYLGI------TSGLGYAINDARDTLEYDRLAATVVI 253 Query: 562 MCCFVLALN 570 + L+ Sbjct: 254 IGVIGFTLD 262 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 76/215 (35%), Gaps = 14/215 (6%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P + + + + R++ M+I++ L + L + Sbjct: 64 APGPALTRLAEMVASGEAWAMTLPSLERIMHGMLIAIALGVPVGILIGRFGFLREITNIP 123 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 ++ I L ++ V+ F A +F I + VW + FS L + Sbjct: 124 FQFLRMISPLSWMPIAVMAFATWDG--------AIVFLIAVAAVWPILFSTAAGLRRVEP 175 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 D +V+R+ W + + +P ++ + +++ W +V +E + + Sbjct: 176 DWFKVARNLGARPWHMLFTIILPAISQDILTGIRLALGVAWIVLVPAEYLGI------TS 229 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G I A + + ++ + + F D + Sbjct: 230 GLGYAINDARDTLEYDRLAATVVIIGVIGFTLDFI 264 >gi|126699086|ref|YP_001087983.1| putative aliphatic sulfonate ABC transporter permease [Clostridium difficile 630] gi|255100508|ref|ZP_05329485.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-63q42] gi|115250523|emb|CAJ68347.1| ABC-type transport system, sulfonates-family permease [Clostridium difficile] Length = 256 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 99/249 (39%), Gaps = 16/249 (6%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI----- 385 + + Y + + + V + W S + +I+ G I Sbjct: 1 MFEKIHKRLKGYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVY 60 Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R+++ +I+S++ IP+G+ G + +P + + + P P+++ Sbjct: 61 ASVRRILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIG 120 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +++I + + I N + G N EV SF+++ R + II+P Sbjct: 121 EESK----IIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSML 176 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 V G G ++ A I +E+ + ++GLG I++ + V++G+ ++ Sbjct: 177 DIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFVIGF 230 Query: 565 FVLALNRFL 573 + + Sbjct: 231 LGILSDYLF 239 Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 100/247 (40%), Gaps = 15/247 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 L +++ I+ +L P + ++D + S+ + R+L +IS Sbjct: 15 FLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGFLISS 74 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L L ++++ P+ + M+S P L + +++F K+I LA+ F Sbjct: 75 LMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESKIIIIILASFF 134 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + N L EV +SF LS + F+ + +P SM +V + + + Sbjct: 135 PIF--------LNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSMLDIVVGLSLGL 186 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 + ++ +E+I G+G I+ +L + + + L D L Sbjct: 187 GYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLFS 240 Query: 261 RPMIVWS 267 + + +S Sbjct: 241 KIITKFS 247 >gi|302132199|ref|ZP_07258189.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 285 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ + + A++ IPVGI IG P + P + PL+V Sbjct: 91 GASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFSRPIPPLAYLPLIVIWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ I G A S T W+ R++I+P Sbjct: 151 GEFSK----VLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQLIRHVIVPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 207 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVTDVVVLGILVIA 260 Query: 564 CFVLALN---RFLWHPLYLY 580 A+ R L L + Sbjct: 261 IIAFAMELGLRALQRKLVPW 280 Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ + L ++R + P+++ + IP L +L Sbjct: 84 STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFSRPIPPLAYLPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQ 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVT 249 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281 >gi|254455396|ref|ZP_05068825.1| glycine betaine/L-proline transport system permease [Candidatus Pelagibacter sp. HTCC7211] gi|207082398|gb|EDZ59824.1| glycine betaine/L-proline transport system permease [Candidatus Pelagibacter sp. HTCC7211] Length = 717 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 86/540 (15%), Positives = 179/540 (33%), Gaps = 67/540 (12%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + +T +L A +S +F A KS+R+ L PIL +MQ++P L +V F Sbjct: 200 SMQTLSFILVAAPLSFIFGLGLGIAAYKSKRVEKALYPILLVMQTMPQYAVLVPALVLFG 259 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 + AA+ V M L IP ++ E R + WQ + Sbjct: 260 VG--------DHAAVIITMVVAVPPMILLTILGLRAIPPEVIEAGRMSGCTNWQLMVKVL 311 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + ++ + ++ + V I G+G + LA+ + ++ L A Sbjct: 312 IPTARRDILIGVNQ-------VIMVCFSMAVISAFIGAKGLGFNLLLALNQLNIGLALEA 364 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFI------ 298 L + + L D++ + W+NK + + + F + + I Sbjct: 365 GLCISLIAILLDKMS----LAWANKQTDYFGNLTFFQRNKNVIFFVASFVIGIILAYVGT 420 Query: 299 -----------------GYSSWNFFSPLSNNVK-------KLCRTLGVIRFHFPENFLQL 334 G S+ +F++ + + K T + P L L Sbjct: 421 FIFKGSFNYLFEIPHNKGISTADFWNKGVDWIFDTFFVYIKAFNTWLIQDVLQPMRALYL 480 Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLI 394 + +L + ++ G+ + + + + D +T + + Sbjct: 481 RMPAVATLVLVVGAGYIIGGIRSALVVCGLTLFIALSPWWD------RALVTFYMATFGV 534 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+ +I VG ++ + + FP+ V+ V+ + + + + Sbjct: 535 VISCLIGFSVGTLCFQNKKSAAFMLGVCDIFQTFPSFVYLIPVMMLFGITDTSVLIAVIV 594 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 Y I G + P E A+ + ++ I P FP+ + G Sbjct: 595 YATIPATRY----TIEGLRSVPIGLHEAATMSGVNKFQRLTKIEFPLAFPHMMLGLNQTI 650 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV-LIMCCFVLALNRFL 573 A I+ LG YI ++ + + L + + + L + + Sbjct: 651 VFALFMVIIGAFIGTED-------LGQYILKALSDKNGAGIGLTLGICVAFIGLIFDNLI 703 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 81/207 (39%), Gaps = 18/207 (8%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I L A T +VIS L F TL ++++ ++ + DI Q+ P Sbjct: 514 IALSPW--WDRALVTFYMATFGVVISCLIGFSVGTLCFQNKKSAAFMLGVCDIFQTFPSF 571 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L ++ F + + + A+ T + L ++P L E + Sbjct: 572 VYLIPVMMLFGI--------TDTSVLIAVIVYATIPATRYTIEGLRSVPIGLHEAATMSG 623 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 ++ +Q+ + P + P ++ + ++ F V+ I D +G YI A+ Sbjct: 624 VNKFQRLTKIEFPLAFPHMMLGLNQTIVFALFMVIIGAFIGTED-------LGQYILKAL 676 Query: 234 KEQDLLAILYAM-LTMLGVIFLYDQLL 259 +++ I + + + + ++D L+ Sbjct: 677 SDKNGAGIGLTLGICVAFIGLIFDNLI 703 >gi|296132128|ref|YP_003639375.1| binding-protein-dependent transport systems inner membrane component [Thermincola sp. JR] gi|296030706|gb|ADG81474.1| binding-protein-dependent transport systems inner membrane component [Thermincola potens JR] Length = 277 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 101/268 (37%), Gaps = 14/268 (5%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 +L IR ++ + +L I+ + ++ F Sbjct: 17 SLTRIRADVGRSWYMTGALSSFVGLLFIWALLSYGEYVNSTFLPTPSRVLAVFVQMLQSP 76 Query: 379 VIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 +W I+++RV + ++A++I IP+GI G + IQP + + PA F PLV Sbjct: 77 NLWSDIGISVYRVTMGFLLAAVIGIPLGILAGTFKFAEAAIQPLTEFIRYMPATAFIPLV 136 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + L++ GT + ++ V P D + + T ++ + Sbjct: 137 MVWAGIGEG----AKILVIFIGTFFQMVLMVADNIRLVPEDLLSASYTLGATRFQVITRV 192 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ++P + P + G AW +V+E+ + +GLG I ++ + + Sbjct: 193 LIPAMMPNLMDTLRLMIGWAWTYLVVAELVA------ANSGLGYSILKAQRFLKTDVIFV 246 Query: 558 GVLIMCCFVLALNRFLW---HPLYLYGT 582 G+L++ L +R L+ + Sbjct: 247 GILVIGILGLLTDRLFAFANKKLFPWAE 274 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 93/251 (37%), Gaps = 18/251 (7%) Query: 22 LLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + + + +++ + P ++ + L +L + R+ +++ Sbjct: 38 FVGLLFIWALLSYGEYVNSTFLPTPSRVLAVFVQMLQSPNLWSDIGISVYRVTMGFLLAA 97 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + LA + + P+ + ++ +P F+ +V+ E A I Sbjct: 98 VIGIPLGILAGTFKFAEAAIQPLTEFIRYMPATAFIPLVMVWAGIG--------EGAKIL 149 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + M + ++ +P DL S + + +Q + +P MP L+ + + + Sbjct: 150 VIFIGTFFQMVLMVADNIRLVPEDLLSASYTLGATRFQVITRVLIPAMMPNLMDTLRLMI 209 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 W ++V +E++ G+G I A + I +L + + L D+L Sbjct: 210 GWAWTYLVVAELVAANS------GLGYSILKAQRFLKTDVIFVGILVIGILGLLTDRLFA 263 Query: 261 ---RPMIVWSN 268 + + W+ Sbjct: 264 FANKKLFPWAE 274 >gi|158424127|ref|YP_001525419.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331016|dbj|BAF88501.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 289 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 89/281 (31%), Gaps = 20/281 (7%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + G + + Q +F + + AW + + Sbjct: 17 RRPWRLPIPRAGALVLALILPVALVILWQLSGKDGALFGGALPTPDRVWNAWVTWAFGPK 76 Query: 370 HFTY-QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + RV +A ++ +P+GI IG+ + + P Q L Sbjct: 77 GMGLNPYSGTWLESVTFSTIRVAKGFSLAILVGVPLGIAIGWWKLFAMVVDPTIQWLRPV 136 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P + P+ ++ + L+ G + I+ N G ++ A Sbjct: 137 PITAWLPISIAIFGIS----DFGSIFLITIGAFYPIVINTTHGTRDVEKNWIRAALMMGS 192 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + R ++LP P TG G AW A IVSE+ + +GLG + ++ Sbjct: 193 SPLTVMRRVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVA------VKSGLGYVLWDAYY 246 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL---------WHPLYLY 580 G V+ ++ + + + W L + Sbjct: 247 VGRMDIVIADMVSIGLLGYLSDVLIVRLEHTVLRWRRLQSF 287 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 79/200 (39%), Gaps = 14/200 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + + +T+R+ +++L + MV+ P + ++ +PI +L ++ Sbjct: 88 LESVTFSTIRVAKGFSLAILVGVPLGIAIGWWKLFAMVVDPTIQWLRPVPITAWLPISIA 147 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F ++ +IF I + + + ++ ++ + S Sbjct: 148 IFGI--------SDFGSIFLITIGAFYPIVINTTHGTRDVEKNWIRAALMMGSSPLTVMR 199 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + + + + W V+ SEM+ V G+G + A + + Sbjct: 200 RVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVAVKS------GLGYVLWDAYYVGRMDIV 253 Query: 242 LYAMLTMLGVIFLYDQLLFR 261 + M+++ + +L D L+ R Sbjct: 254 IADMVSIGLLGYLSDVLIVR 273 >gi|167422071|ref|ZP_02313824.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|166958883|gb|EDR55904.1| ABC transporter , permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] Length = 259 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + ++ +++RV++ +I +++ +P+G+W+G + + P Q L P Sbjct: 51 LMWSLSGELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPP 110 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + N L+ G + IL N IAG + A + Sbjct: 111 IAYIPLAMLWFGLG----NPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQ 166 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 +R IILP PY +TG G A+ IV+E+ + +G+G I E+ E Sbjct: 167 ATMFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIA------VNSGVGYRILEAREYM 220 Query: 551 SFPEVVLGVLIMCCFVLALN 570 +V+ G+ + L ++ Sbjct: 221 WSDKVIAGMFTIGFLGLVID 240 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 78/212 (36%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L A + R++ +I L S+ ++ P++ ++ IP + ++ Sbjct: 57 GELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPL 116 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P A F I + + + + N+ +R+ Sbjct: 117 AMLWFGLGNPP--------AFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQAT 168 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P ++ M + + + V+ +EMI V G+G I A + Sbjct: 169 MFRRIILPAATPYILTGMRVGIGTAFICVIVAEMIAVNS------GVGYRILEAREYMWS 222 Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267 ++ M T+ + + D L R ++ W Sbjct: 223 DKVIAGMFTIGFLGLVIDLCMDRLNRRLLRWH 254 >gi|83589331|ref|YP_429340.1| binding-protein dependent transport system inner membrane protein [Moorella thermoacetica ATCC 39073] gi|83572245|gb|ABC18797.1| Binding-protein-dependent transport systems inner membrane component [Moorella thermoacetica ATCC 39073] Length = 262 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 13/203 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ FRV ++A+ I +P+GI +G + + +P PA+ F PL + +S Sbjct: 68 GISFFRVTTGFLLAAAIGVPLGILMGSLKVVEAFFEPLLAFFRYMPASAFIPLTIIWLSI 127 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + ++ G + ++ V+ P D + A + +R +ILP Sbjct: 128 FETQK----IGVVFIGIFFQLVLMVMDVTHNVPQDLIDTAYTLGARPLEVFRRVILPAAL 183 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + A G AW IV+E+ + ++GLG I + + S P++ +G+L + Sbjct: 184 PGIMDTLRVALGWAWTYVIVAELVA------ASSGLGFLIMNAGRQLSTPDMFVGILTIG 237 Query: 564 CFVLALN---RFLWHPLYLYGTR 583 + + + L+ L+ + R Sbjct: 238 VLGIICDMSFKVLYRWLFPWTER 260 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 97/251 (38%), Gaps = 17/251 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + +L + + H P V + L + L + R+ + +++ Sbjct: 24 FVLLLLAWQLGVTVGHLPPTHLPPPGAVARAAVELAGNGLINDIGISFFRVTTGFLLAAA 83 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 L + + P+L + +P F+ T+++ E I Sbjct: 84 IGVPLGILMGSLKVVEAFFEPLLAFFRYMPASAFIPLTIIWLSIF--------ETQKIGV 135 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 +F + + + N+P+DL + + + + F + +P ++PG++ + +++ Sbjct: 136 VFIGIFFQLVLMVMDVTHNVPQDLIDTAYTLGARPLEVFRRVILPAALPGIMDTLRVALG 195 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W +V+ +E++ G+G I A ++ + +LT+ + + D ++ Sbjct: 196 WAWTYVIVAELVAASS------GLGFLIMNAGRQLSTPDMFVGILTIGVLGIICDMSFKV 249 Query: 259 LFRPMIVWSNK 269 L+R + W+ + Sbjct: 250 LYRWLFPWTER 260 >gi|325121890|gb|ADY81413.1| taurine transporter subunit [Acinetobacter calcoaceticus PHEA-2] Length = 289 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQTQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 88 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQTQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW++ +P ++P ++ + + + GW +VA+E++ GIG + A + Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274 >gi|33321797|gb|AAQ06631.1| osmoprotectant transport protein OusBW [Erwinia chrysanthemi] Length = 406 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 L + I+ L Q ++ + ++ + + A T +L+A+ + Sbjct: 150 LTGLPAPVAILVFSLLAWQVSSFGMGVATLLSLVAIGAIGAWSQAMVTLALVLTALSFCV 209 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 210 IIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFG---IGNVPGVVVTIIF 266 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E ++SF S Q + + +P +MP ++ + ++ Sbjct: 267 A-----LPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTL 321 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 322 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 372 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 86/235 (36%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L V V +AWQ + + T ++ + +G +T+ V+ + Sbjct: 149 LLTGLPAPVAILVFSLLAWQVSSFGMGVATLLSLVAIGAIGAWSQAMVTLALVLTALSFC 208 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 II +P+GIW+ + ++P + PA V+ +V N+ ++ I Sbjct: 209 VIIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGIG----NVPGVVVTI 264 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G P D E A SF + + + LP P + G A Sbjct: 265 IFALPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 324 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 325 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 372 >gi|222109084|ref|YP_002551350.1| ABC transporter permease protein (nitrate/sulfonates) [Agrobacterium radiobacter K84] gi|221728006|gb|ACM31056.1| ABC transporter permease protein (nitrate/sulfonates) [Agrobacterium radiobacter K84] Length = 313 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV+ IA+++ + +GI +G ++ Q+L P + PL + Sbjct: 117 AVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLADLMVQVLKPIPPIAWIPLSILWFGI 176 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +++ G + IL + + + E+A + + R +++PG Sbjct: 177 G----EEAKIFIIVLGAFFPILVSTLDAVHQTDVRYVELARVLEVPRLNFIRQVMIPGAL 232 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P ++G +W + +E+ + ++G+G I + + V+ G++ + Sbjct: 233 PQIMSGLRLGITMSWMCVVAAELIA------ASSGIGFLIMDGRVMSNASVVLAGMITLG 286 Query: 564 CFVLALN---RFLWHPLYLY 580 + RF L + Sbjct: 287 VLGKLTDDALRFAERRLVRW 306 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 89/233 (38%), Gaps = 17/233 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P IV + L ++ + ++ R+L I+ + + L + Sbjct: 93 LPAPSTIVRTIWNMTLSGELAEHVAVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLAD 152 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 ++ +++ IP + ++ ++++F E A IF I + + S ++ Sbjct: 153 LMVQVLKPIPPIAWIPLSILWFGIG--------EEAKIFIIVLGAFFPILVSTLDAVHQT 204 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 E++R + + +P ++P ++ + + ++ W VVA+E+I Sbjct: 205 DVRYVELARVLEVPRLNFIRQVMIPGALPQIMSGLRLGITMSWMCVVAAELIAASS---- 260 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 GIG I + +L M+T+ + L D + R ++ W F Sbjct: 261 --GIGFLIMDGRVMSNASVVLAGMITLGVLGKLTDDALRFAERRLVRWRAGFS 311 >gi|159027354|emb|CAO90540.1| srpM [Microcystis aeruginosa PCC 7806] Length = 256 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ + RV+V +++AS I +P+G+ IG + S + Q + PL Sbjct: 59 GEIMPHILTSCRRVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFRPMISPLSWMPL 118 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + L + L+ W IL N AG +A + +A S T Sbjct: 119 AVMVLGIGDL----PVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQ 174 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 IILP I + +TG A G W + +E+ + + GLG YI ++ ++ ++ E++ Sbjct: 175 IILPAILSHLLTGFRLAIGIIWIVLVQAEML------VVSAGLGYYILDTRDRLAYSELM 228 Query: 557 LGVLIMCCFVLALN 570 +L++ L+ Sbjct: 229 AVILVIGAIGYLLD 242 Score = 95.0 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 82/249 (32%), Gaps = 17/249 (6%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV---HSLPQYASRTTL 70 R ++ + +L+ + L L + + + Sbjct: 11 RALLPLWGMGFGLLLWWLFTSPLWHSNPILNDFSPERSFVALLRPFVGGEIMPHILTSCR 70 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ +V++ L R L L + I L ++ V+ Sbjct: 71 RVIVGLVLASAIGVPLGVLIGLYRSLESALSALFQFRPMISPLSWMPLAVMVLGIG---- 126 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +L F + + +W + + + + R ++ S + + + + +P + Sbjct: 127 ----DLPVYFLLTVAAIWPILLNTAAGVNAVDRSWLTLAHSLCATRGETVFQIILPAILS 182 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 L+ +++ W +V +EM+VV G+G YI ++ +L + Sbjct: 183 HLLTGFRLAIGIIWIVLVQAEMLVVSA------GLGYYILDTRDRLAYSELMAVILVIGA 236 Query: 251 VIFLYDQLL 259 + +L D L Sbjct: 237 IGYLLDWGL 245 >gi|307945113|ref|ZP_07660449.1| taurine ABC transporter, permease protein [Roseibium sp. TrichSKD4] gi|307770986|gb|EFO30211.1| taurine ABC transporter, permease protein [Roseibium sp. TrichSKD4] Length = 420 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 15/200 (7%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++ S+I IP+G +G + P + + P PLV+ + Sbjct: 229 SLLRVIGGFLLGSLIGIPLGYAMGLSSWVRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 288 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ W + AG S A S + + +II+P P Sbjct: 289 TGK----IALLFLAALWIMTIAARAGVSGVNITKVHAAYSLGASKTQILWHIIVPNSLPE 344 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TGA A G W + +E+ + G G I +++ V++G++++ Sbjct: 345 IFTGARVAMGVCWGTVVAAELVA------AQKGAGMMIIAASKFQLTDIVLMGIILIGIV 398 Query: 566 VLALNRFLWHPLYLYGTRCL 585 +++ + R L Sbjct: 399 GYSIDILM-----RMAERLL 413 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 86/213 (40%), Gaps = 17/213 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L ++ + LR++ ++ L S + PI++ M+ +P L + Sbjct: 221 TLWEHLGSSLLRVIGGFLLGSLIGIPLGYAMGLSSWVRGWFDPIVEFMRPVPPLALIPLV 280 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W MT + + + + S S Q Sbjct: 281 IIWFGIWETGK--------IALLFLAALWIMTIAARAGVSGVNITKVHAAYSLGASKTQI 332 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 W++ VP S+P + ++M W VVA+E++ G G I A K Q Sbjct: 333 LWHIIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AQKGAGMMIIAASKFQLTD 386 Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 +L ++ + V + D L+ R ++ W + Sbjct: 387 IVLMGIILIGIVGYSIDILMRMAERLLVPWKGR 419 >gi|224367910|ref|YP_002602073.1| ABC-type transporter, membrane spanning protein [Desulfobacterium autotrophicum HRM2] gi|223690626|gb|ACN13909.1| ABC-type transporter, membrane spanning protein [Desulfobacterium autotrophicum HRM2] Length = 300 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 26/257 (10%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLI 394 L W + + + + + + + + +++ RVV+ Sbjct: 36 APIFLIFLWLVLASRIDNQVILPGVWEVGTLLFHPTQDMIGMGSLASNVLVSLVRVVMGY 95 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------- 446 IA I +P+G+ +G+ F L P + PLV++ L Sbjct: 96 SIAGAIAVPLGVVMGYYGLAFRFFNGFLSLFRPIPPLAWVPLVMAWFGIASLATLTGVET 155 Query: 447 --------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + ++ G + IL I G + A + + +R I+ Sbjct: 156 GKSFIYLNNIKFSMLFIIFIGAFYPILTATIHGVRNVSVTLIDSARVLGASENQIFRKIL 215 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P P +TG G AW + +E+ +G+G I + S V+ G Sbjct: 216 IPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-----SLSGIGYMITHAFTLASTDIVIAG 270 Query: 559 VLIMCCFVLALNRFLWH 575 ++ + ++ H Sbjct: 271 MISIGVVGGLMDMVFRH 287 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 17/210 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL + +R++ I+ + L + + IP L ++ Sbjct: 78 GSLASNVLVSLVRVVMGYSIAGAIAVPLGVVMGYYGLAFRFFNGFLSLFRPIPPLAWVPL 137 Query: 119 TVVYFMNLYPGKVIGAELAA------------IFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 + +F + G E +F IF + + + + N+ L Sbjct: 138 VMAWFGIASLATLTGVETGKSFIYLNNIKFSMLFIIFIGAFYPILTATIHGVRNVSVTLI 197 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 + +R S Q F + +P +MP ++ M + + W +V++EM+ L GIG Sbjct: 198 DSARVLGASENQIFRKILIPAAMPSIITGMRIGLGIAWMCLVSAEMLPG-----SLSGIG 252 Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 I A ++ M+++ V L D Sbjct: 253 YMITHAFTLASTDIVIAGMISIGVVGGLMD 282 >gi|304398693|ref|ZP_07380565.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] gi|304353904|gb|EFM18279.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] Length = 363 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q T I +V I + A T +L+A++ + Sbjct: 109 LLGMPAPVAILVFALIAWQIATPAMGIATLVSLIAIGAIGAWSQAMVTLALVLTALMFCI 168 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 169 LIGLPLGIWLARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 225 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E S SF S Q + + +P +MP ++ + ++ Sbjct: 226 A-----LPPIVRLTILGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTL 280 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 281 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 331 Score = 91.5 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 89/281 (31%), Gaps = 26/281 (9%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 T + ++ F + V + + P + + I W Sbjct: 77 TTGIDWVVNHFRPLFQGIRVPVDYILSAFQQLLLGMP-------APVAILVFALIAWQIA 129 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + I I + +T+ V+ ++ +I +P+GIW+ Sbjct: 130 TPAMGIATLVSLIAI--------GAIGAWSQAMVTLALVLTALMFCILIGLPLGIWLARS 181 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + ++P + PA V+ +V N+ ++ I I+ I G Sbjct: 182 ERAARIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILG 237 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 P D E + SF + + + LP P + G A + +++ + + G Sbjct: 238 IKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG- 296 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G + + + L+R Sbjct: 297 ------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 331 >gi|239827957|ref|YP_002950581.1| binding-protein-dependent transporters inner membrane component [Geobacillus sp. WCH70] gi|239808250|gb|ACS25315.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. WCH70] Length = 281 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 92/276 (33%), Gaps = 19/276 (6%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG------IAWQSIGYI 367 + P + L IF C+ V I + I + Sbjct: 8 ARQPLLRKEWERRIPAFGNKKIKKWMTQAALPIFIICLWQLVGITGEVSKTVLPTPIDIV 67 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 + + +++FR ++ + I I GI +GF I P Q+L Sbjct: 68 QAAYQLTISGELFTHLKVSIFRAATGFLLGAGIGILAGIAVGFSTKTEDVIDPTVQMLRT 127 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P PL + + + LL+ G + + N G +VA H Sbjct: 128 IPHLAVAPLFILWFGFGETSK----ILLIAKGAFFPVYVNTFLGIRGVDAKLFDVARILH 183 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + W +I+P P ++G + G AW +V+E+ T G+G + ++ Sbjct: 184 FSRWEKITLLIIPSALPTILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDAR 237 Query: 548 EKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + + V +G+++ + R L L + Sbjct: 238 QFSNTDIVFVGIILFAVVGKLTDSLVRVLEKRLLRW 273 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 90/233 (38%), Gaps = 17/233 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P DIV L + + R + ++ + S + V+ Sbjct: 60 LPTPIDIVQAAYQLTISGELFTHLKVSIFRAATGFLLGAGIGILAGIAVGFSTKTEDVID 119 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + ++++IP L +++F K++ A F ++ + + + + Sbjct: 120 PTVQMLRTIPHLAVAPLFILWFGFGETSKILLIAKGAFFPVYV--------NTFLGIRGV 171 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L +V+R S W+K L +P ++P ++ + +S+ W +V +E++ Sbjct: 172 DAKLFDVARILHFSRWEKITLLIIPSALPTILSGIRLSLGAAWLGLVVAELMG------S 225 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271 GIG + A + + + ++ V L D L L + ++ W + ++ Sbjct: 226 TEGIGYMMMDARQFSNTDIVFVGIILFAVVGKLTDSLVRVLEKRLLRWQDTYK 278 >gi|317494363|ref|ZP_07952777.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917613|gb|EFV38958.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 282 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 101/286 (35%), Gaps = 23/286 (8%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + + +K R + +++ SN VS + V V + Sbjct: 2 SIHSTLKNDTREVANKVAVSRGRKVRVPSNVVVSAFTLLVILAVWWAVTALHLISPLFLP 61 Query: 368 VNHFTYQDVLYVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + + + G ++ R+++ ++ A +I +PVGI +G P + Sbjct: 62 APQQVLKQWVSISTQGFMDATLGQHLAASLSRILIALLAAVVIGVPVGIAMGLNPTVRGI 121 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P ++ P + PL++ + LL+ + AG + Sbjct: 122 LDPIIEIYRPVPPLAYLPLMIIWFGIGETSK----ILLIYLAIFAPVTLAAAAGVRSVEQ 177 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 A + + W+ Y++LP P +TG G W+ + +E+ + T Sbjct: 178 VRVRAAQALGASRWQVLWYVVLPNALPEILTGLRIGLGVGWSTLVAAELIA------ATR 231 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 GLG I + E + V+ G+ ++ AL R L L + Sbjct: 232 GLGFMIQSAGEFLATDVVIAGISVIAFIAFALELGLRALQRRLTPW 277 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 103/253 (40%), Gaps = 21/253 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVP----RDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 L+ + + + L P + V I +L Q+ + + R+L A++ Sbjct: 40 LVILAVWWAVTALHLISPLFLPAPQQVLKQWVSISTQGFMDATLGQHLAASLSRILIALL 99 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +++ + + +L PI++I + +P L +L +++F E + Sbjct: 100 AAVVIGVPVGIAMGLNPTVRGILDPIIEIYRPVPPLAYLPLMIIWFGIG--------ETS 151 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + +T + + ++ + +++ S WQ WY+ +P ++P ++ + Sbjct: 152 KILLIYLAIFAPVTLAAAAGVRSVEQVRVRAAQALGASRWQVLWYVVLPNALPEILTGLR 211 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 + + GW +VA+E+I G+G I A + ++ + + + F + Sbjct: 212 IGLGVGWSTLVAAELIA------ATRGLGFMIQSAGEFLATDVVIAGISVIAFIAFALEL 265 Query: 257 --QLLFRPMIVWS 267 + L R + W Sbjct: 266 GLRALQRRLTPWH 278 >gi|251788501|ref|YP_003003222.1| glycine betaine transporter membrane protein [Dickeya zeae Ech1591] gi|247537122|gb|ACT05743.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] Length = 400 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T +L+A+ ++ A S R V+ P+LD MQ+ P +L V+ F Sbjct: 188 AMVTLALVLTALFFCIILGLPLGIWLAHSDRAARVVRPLLDAMQTTPAFVYLVPIVMLFG 247 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA + + + +P DL E ++SF S Q + + Sbjct: 248 ---IGNVPGVVVTIIFA-----LPPIVRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQ 299 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +MP ++ + ++ VV + MI VG G+G + I D+ Sbjct: 300 LPLAMPTIMAGINQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVG 352 Query: 245 MLTMLGVIFLYDQL 258 ++++ + + D+L Sbjct: 353 GVSIVILAIILDRL 366 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 85/235 (36%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L V +AWQ + + T ++ + +G +T+ V+ + Sbjct: 143 LLTSLPAPVAILAFSLLAWQVSSFGMGVATLLSLVIIGAIGAWSQAMVTLALVLTALFFC 202 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 I+ +P+GIW+ + ++P + PA V+ +V N+ ++ I Sbjct: 203 IILGLPLGIWLAHSDRAARVVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 258 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G P D E A SF + + + LP P + G A Sbjct: 259 IFALPPIVRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 318 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 319 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVSIVILAIILDRL 366 >gi|159161960|ref|NP_396576.3| ABC transporter, membrane spanning protein (nitrate/sulfonates) [Agrobacterium tumefaciens str. C58] gi|15163531|gb|AAK91017.1| ABC transporter, membrane spanning protein (nitrate/sulfonates) [Agrobacterium tumefaciens str. C58] Length = 313 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV+ IA+++ + +GI +G ++ Q+L P + PL + Sbjct: 117 AVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLADLMVQVLKPIPPIAWIPLSILWFGI 176 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +++ G + IL + + + E+A + + R +++PG Sbjct: 177 G----EEAKIFIIVLGAFFPILVSTLDAVHQTDVRYVELARVLEVPRLNFIRQVMIPGAL 232 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P ++G +W + +E+ + ++G+G I + + V+ G++ + Sbjct: 233 PQIMSGLRLGITMSWMCVVAAELIA------ASSGIGFLIMDGRVMSNASVVLAGMITLG 286 Query: 564 CFVLALN---RFLWHPLYLY 580 + RF L + Sbjct: 287 VLGKLTDDALRFAERRLVRW 306 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 89/233 (38%), Gaps = 17/233 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P IV + L ++ + ++ R+L I+ + + L + Sbjct: 93 LPAPSTIVRTIWNMTLSGELAEHVAVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLAD 152 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 ++ +++ IP + ++ ++++F E A IF I + + S ++ Sbjct: 153 LMVQVLKPIPPIAWIPLSILWFGIG--------EEAKIFIIVLGAFFPILVSTLDAVHQT 204 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 E++R + + +P ++P ++ + + ++ W VVA+E+I Sbjct: 205 DVRYVELARVLEVPRLNFIRQVMIPGALPQIMSGLRLGITMSWMCVVAAELIAASS---- 260 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 GIG I + +L M+T+ + L D + R ++ W F Sbjct: 261 --GIGFLIMDGRVMSNASVVLAGMITLGVLGKLTDDALRFAERRLVRWRAGFS 311 >gi|239503534|ref|ZP_04662844.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB900] Length = 289 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 88 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW++ +P ++P ++ + + + GW +VA+E++ GIG + A + Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274 >gi|169796267|ref|YP_001714060.1| taurine ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|213156998|ref|YP_002319043.1| taurine transport system permease protein [Acinetobacter baumannii AB0057] gi|215483722|ref|YP_002325945.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB307-0294] gi|301345497|ref|ZP_07226238.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB056] gi|301594987|ref|ZP_07239995.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB059] gi|332855398|ref|ZP_08435854.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332867256|ref|ZP_08437506.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] gi|169149194|emb|CAM87074.1| Taurine transport protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|213056158|gb|ACJ41060.1| taurine transport system permease protein [Acinetobacter baumannii AB0057] gi|213985797|gb|ACJ56096.1| Taurine transport system permease protein tauC [Acinetobacter baumannii AB307-0294] gi|332727488|gb|EGJ58915.1| ABC transporter, permease protein [Acinetobacter baumannii 6013150] gi|332734089|gb|EGJ65222.1| ABC transporter, permease protein [Acinetobacter baumannii 6013113] Length = 289 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 88 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW++ +P ++P ++ + + + GW +VA+E++ GIG + A + Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274 >gi|22125122|ref|NP_668545.1| glycine betaine transporter membrane protein [Yersinia pestis KIM 10] gi|45442233|ref|NP_993772.1| glycine betaine transporter membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51597275|ref|YP_071466.1| glycine betaine transporter membrane protein [Yersinia pseudotuberculosis IP 32953] gi|108808368|ref|YP_652284.1| glycine betaine transporter membrane protein [Yersinia pestis Antiqua] gi|108811295|ref|YP_647062.1| glycine betaine transporter membrane protein [Yersinia pestis Nepal516] gi|149365459|ref|ZP_01887494.1| glycine betaine/L-proline transport system permease [Yersinia pestis CA88-4125] gi|153949330|ref|YP_001400041.1| glycine betaine transporter membrane protein [Yersinia pseudotuberculosis IP 31758] gi|165925220|ref|ZP_02221052.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939926|ref|ZP_02228464.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008318|ref|ZP_02229216.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212363|ref|ZP_02238398.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398795|ref|ZP_02304319.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421456|ref|ZP_02313209.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423494|ref|ZP_02315247.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468718|ref|ZP_02333422.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis FV-1] gi|170023360|ref|YP_001719865.1| glycine betaine transporter membrane protein [Yersinia pseudotuberculosis YPIII] gi|186896379|ref|YP_001873491.1| glycine betaine transporter membrane protein [Yersinia pseudotuberculosis PB1/+] gi|218929723|ref|YP_002347598.1| glycine betaine transporter membrane protein [Yersinia pestis CO92] gi|229838199|ref|ZP_04458358.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895455|ref|ZP_04510627.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898689|ref|ZP_04513834.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229901540|ref|ZP_04516662.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270489727|ref|ZP_06206801.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504445|ref|YP_003568507.1| glycine betaine/L-proline transport system permease [Yersinia pestis Z176003] gi|21957980|gb|AAM84796.1|AE013725_9 permease of high-affinity ABC transport system for glycine betaine and proline [Yersinia pestis KIM 10] gi|45437097|gb|AAS62649.1| glycine betaine/L-proline transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51590557|emb|CAH22198.1| ABC glycine/betaine/L-proline transporter, permease subunit proW [Yersinia pseudotuberculosis IP 32953] gi|108774943|gb|ABG17462.1| glycine betaine/L-proline transport system permease [Yersinia pestis Nepal516] gi|108780281|gb|ABG14339.1| glycine betaine/L-proline transport system permease [Yersinia pestis Antiqua] gi|115348334|emb|CAL21267.1| glycine betaine/L-proline transport system permease [Yersinia pestis CO92] gi|149291872|gb|EDM41946.1| glycine betaine/L-proline transport system permease [Yersinia pestis CA88-4125] gi|152960825|gb|ABS48286.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|165912145|gb|EDR30784.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922827|gb|EDR39978.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992700|gb|EDR45001.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206294|gb|EDR50774.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960945|gb|EDR56966.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051299|gb|EDR62707.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057664|gb|EDR67410.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749894|gb|ACA67412.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|186699405|gb|ACC90034.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|229681469|gb|EEO77563.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229688237|gb|EEO80308.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694565|gb|EEO84612.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701610|gb|EEO89637.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362564|gb|ACY59285.1| glycine betaine/L-proline transport system permease [Yersinia pestis D106004] gi|262366431|gb|ACY62988.1| glycine betaine/L-proline transport system permease [Yersinia pestis D182038] gi|270338231|gb|EFA49008.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294354904|gb|ADE65245.1| glycine betaine/L-proline transport system permease [Yersinia pestis Z176003] gi|320016145|gb|ADV99716.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 388 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ ++ I + A T +L+++ + Sbjct: 133 LLGMPAPVAILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAMVTLALVLTSLFFCI 192 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 193 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 249 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 250 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 304 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 305 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 355 Score = 93.5 bits (231), Expect = 8e-17, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + P Sbjct: 95 PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQTLLLGMPAPV-------- 140 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F + + ++ ++ + +T+ V+ + + Sbjct: 141 ---AILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 193 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 194 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 249 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 250 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 309 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 310 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 355 >gi|331017063|gb|EGH97119.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 285 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ + + A++ IPVGI IG P + P + PL+V Sbjct: 91 GASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPLIVIWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ I G A S T W+ R++I+P Sbjct: 151 GEFSK----VLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQLIRHVIVPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 207 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVTDVVVLGILVIA 260 Query: 564 CFVLALN---RFLWHPLYLY 580 A+ R L L + Sbjct: 261 IIAFAMELGLRALQRKLVPW 280 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ + L ++R + P+++ + IP L +L Sbjct: 84 STLWQHLGASLQRIGLALGAATLTAIPVGIAIGQNRIARGIFDPLIEFYRPIPPLAYLPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 144 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPARVRAAQSLGATRWQ 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 196 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFIVQSAAQFLVT 249 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 250 DVVVLGILVIAIIAFAMELGLRALQRKLVPWH 281 >gi|299134441|ref|ZP_07027634.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] gi|298591188|gb|EFI51390.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] Length = 257 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 80/185 (43%), Gaps = 10/185 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +++++I +P+G+ IG+ I P ++L PA + PL + Sbjct: 58 LTSLQRVFIAFVLSTVIGVPLGLIIGWSRTAREYIFPVLEMLRPIPALAWVPLAILMFK- 116 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + L + N + G + + A + W+ +R+I++PG Sbjct: 117 ---SSEGPVIFLTFLPAFFATTLNSMLGVHSIDESYFRAADCLGASRWQVFRHIVVPGSL 173 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ TG + G AW + + E+ + + GLG I S S+P +V+G++ + Sbjct: 174 PFVFTGLEISIGLAWFSLVAGEMIAGEY------GLGYVIYTSYTMVSYPTIVIGMITLG 227 Query: 564 CFVLA 568 Sbjct: 228 VVGYV 232 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 14/191 (7%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + R+ A V+S + + SR + P+L++++ IP L ++ ++ F Sbjct: 56 HILTSLQRVFIAFVLSTVIGVPLGLIIGWSRTAREYIFPVLEMLRPIPALAWVPLAILMF 115 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 + +E IF F + T + + +I + S WQ F ++ Sbjct: 116 KS--------SEGPVIFLTFLPAFFATTLNSMLGVHSIDESYFRAADCLGASRWQVFRHI 167 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 VP S+P + + +S+ WF +VA EMI G+G I + I+ Sbjct: 168 VVPGSLPFVFTGLEISIGLAWFSLVAGEMIAG------EYGLGYVIYTSYTMVSYPTIVI 221 Query: 244 AMLTMLGVIFL 254 M+T+ V ++ Sbjct: 222 GMITLGVVGYV 232 >gi|184157803|ref|YP_001846142.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acinetobacter baumannii ACICU] gi|332876491|ref|ZP_08444258.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] gi|183209397|gb|ACC56795.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii ACICU] gi|322508118|gb|ADX03572.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii 1656-2] gi|323517692|gb|ADX92073.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii TCDC-AB0715] gi|332735349|gb|EGJ66409.1| ABC transporter, permease protein [Acinetobacter baumannii 6014059] Length = 289 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 88 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW++ +P ++P ++ + + + GW +VA+E++ GIG + A + Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274 >gi|330820393|ref|YP_004349255.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia gladioli BSR3] gi|327372388|gb|AEA63743.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia gladioli BSR3] Length = 286 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 98/268 (36%), Gaps = 20/268 (7%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC----VVCGVAIGIAWQ 362 SP + R+ R + L + +V + AWQ Sbjct: 14 SPAAQGGAVAPRSGAASRLRGALLGAAGLLAALGIWWLAVALLAGHNAMVAQFSPLRAWQ 73 Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V ++ ++ R+ + A ++ +P G IG + + P Sbjct: 74 ALPTLVRDD------QLLTHVATSLRRIAAGLGCALLVGVPAGFAIGRLRWLEHALSPTL 127 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+ V + + L+ F W ++ + AG + + E+ Sbjct: 128 QFLRMISPLSWMPVAVMSLGVGDR----AVIFLLAFAAVWPLILSTAAGVAQLDRRWIEL 183 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 S T +I +PGI + +TG A G W + +E+ ++GLG Sbjct: 184 GRSLAATRAEMLWHIYVPGIAAHVLTGVRLAIGILWIVLVPAEMIG------VSSGLGYL 237 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN 570 I ++ ++ ++ E+ +L++ AL+ Sbjct: 238 ILDTRDRLAYSELAAVILVIGVLGFALD 265 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 83/232 (35%), Gaps = 17/232 (7%) Query: 28 VIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84 + + LL G P +P + L + + + R+ + + +LL Sbjct: 48 IWWLAVALLAGHNAMVAQFSPLRAWQALPTLVRDDQLLTHVATSLRRIAAGLGCALLVGV 107 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + R L L P L ++ I L ++ V+ + A IF + Sbjct: 108 PAGFAIGRLRWLEHALSPTLQFLRMISPLSWMPVAVMSLGVG--------DRAVIFLLAF 159 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + VW + S + + R E+ RS + + W++ VP ++ + +++ W Sbjct: 160 AAVWPLILSTAAGVAQLDRRWIELGRSLAATRAEMLWHIYVPGIAAHVLTGVRLAIGILW 219 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +V +EMI V G+G I + +L + + F D Sbjct: 220 IVLVPAEMIGVSS------GLGYLILDTRDRLAYSELAAVILVIGVLGFALD 265 >gi|326332738|ref|ZP_08198999.1| putative glycine betaine ABC transport system integral [Nocardioidaceae bacterium Broad-1] gi|325949437|gb|EGD41516.1| putative glycine betaine ABC transport system integral [Nocardioidaceae bacterium Broad-1] Length = 665 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 75/585 (12%), Positives = 182/585 (31%), Gaps = 55/585 (9%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 +S FP + ++ V + + I +V + ++ + + Sbjct: 102 LVSVPDFPRPVPQIGWLGVTALAAWVALAIAGWRTAV-LVGLSFLSFGMFGYWSDSMDLL 160 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 + A+ S++ A S+ VL +LD+MQ++P +L V++F Sbjct: 161 IVTFVAVAASVIIGLPLAVWVGTSKAANTVLSNLLDLMQTMPTFVYLLPIVLFFGIG--- 217 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 AA+ A + + + ++P E + + + Q+ + +P + Sbjct: 218 -----ASAAVVATLVYALPPIIRIAGYGIRSVPETTIEATDAAGQTAVQRLLKVQLPMAR 272 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 +V + ++ + + PG+G + A+ + ++ + ++ Sbjct: 273 KTIVVGLNQTIMAALSMATIASYVDG-------PGLGKPVLDALVKNNVGNAFVPGMLIV 325 Query: 250 GVIFLYDQLLFRPMIVWSNKFRL------------ERTTGIYPADSWVLYLFRKTN---- 293 + + D R S + L G + VL +T Sbjct: 326 VMAVMLD----RTTTAASERSELVARGGGGGATLRRAVVGAGALVALVLVYLSRTYGWAA 381 Query: 294 ------FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347 + ++ +F ++ + + N +Q + ++ + Sbjct: 382 EFPATTWGPWLSERVDSFVGWVTATFGGFTEAVKNVTSDLLLNPMQSLLAESPWWLTGVA 441 Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 + V A + + Y D+ + IT+ +V ++ ++ + +G+W Sbjct: 442 ILALAWIVGGLRASLAAVVCLAGIWYLDLWHD---AMITLNMTLVATLMVMVLALVLGVW 498 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 + R + ++P P V+ V++ + + Sbjct: 499 MARRRGVDLILRPLLDAGQTIPPFVYLIPVLALFGPTRFTAIVAGIVYAAPAAIKL---- 554 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 V G + E + S T W+ + LP V A +++ + Sbjct: 555 VADGVKGVSPNTIEASRSTGATTWQEITKVQLPMARGSLVLAANQGLLYVLAMAVIGGMV 614 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 G + LG +E KG L + + ++R Sbjct: 615 GAGALGYDVV-LGFSRSEEWGKG-----AAAGLTIVLLGIMIDRI 653 Score = 58.0 bits (139), Expect = 5e-06, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 285 VLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYML 344 + + ++ ++ V L R + V F P + ++ + Sbjct: 68 FRDSVLGSRDTNPVIQLTYQLGESFTSAVDWLQRLVSVPDFPRPVPQIGWLGVTALAAWV 127 Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + V +G+++ S G D+L V V + + II +P+ Sbjct: 128 ALAIAGWRTAVLVGLSFLSFGMFGYWSDSMDLLIVT----------FVAVAASVIIGLPL 177 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 +W+G ++ + L+ P V+ +V + + I Sbjct: 178 AVWVGTSKAANTVLSNLLDLMQTMPTFVYLLPIVLFFGIGASAAVVATLVY----ALPPI 233 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + P E + T + + LP V G A + + ++ Sbjct: 234 IRIAGYGIRSVPETTIEATDAAGQTAVQRLLKVQLPMARKTIVVGLNQTIMAALSMATIA 293 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ K + + +++ + L+R Sbjct: 294 SYVDG-------PGLGKPVLDALVKNNVGNAFVPGMLIVVMAVMLDR 333 >gi|262067155|ref|ZP_06026767.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC 33693] gi|291379113|gb|EFE86631.1| ABC transporter, permease protein [Fusobacterium periodonticum ATCC 33693] Length = 250 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 83/189 (43%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+ I+S++ I +GI++G Q + P + PL++ Sbjct: 59 LSLRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLILTAIRQIPMIAWIPLIILWAGIG 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ ++++F + I+ N + G + + EVA + ++ + + LP P Sbjct: 119 EVSK----IVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYLPSALP 174 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG G +W A + SE+ + ++G+G + ++ V++ ++I+ Sbjct: 175 NIFTGLRLGLGASWMAVVASELIA------SSSGIGYRLNDARSLMRSDVVIVCMIIIGL 228 Query: 565 FVLALNRFL 573 L +++ + Sbjct: 229 VGLLMDKLI 237 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 14/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L S + R+L+ IS + S + IL ++ IP++ + Sbjct: 48 LKSGQLSNDLSLSLRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLILTAIRQIPMIAW 107 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + +++ E++ I I + + + + + + EV++ + LS Sbjct: 108 IPLIILWAGIG--------EVSKIVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLS 159 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 F+ + +P ++P + + + + W VVASE+I GIG + A Sbjct: 160 KKDTFFKVYLPSALPNIFTGLRLGLGASWMAVVASELIASSS------GIGYRLNDARSL 213 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 ++ M+ + V L D+L+ Sbjct: 214 MRSDVVIVCMIIIGLVGLLMDKLI 237 >gi|145598908|ref|YP_001162984.1| glycine betaine transporter membrane protein [Yersinia pestis Pestoides F] gi|145210604|gb|ABP40011.1| glycine betaine/L-proline transport system permease [Yersinia pestis Pestoides F] Length = 384 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ ++ I + A T +L+++ + Sbjct: 129 LLGMPAPVAILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAMVTLALVLTSLFFCI 188 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 189 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 245 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 246 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 300 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 301 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 351 Score = 93.5 bits (231), Expect = 1e-16, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + P Sbjct: 91 PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQTLLLGMPAPV-------- 136 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F + + ++ ++ + +T+ V+ + + Sbjct: 137 ---AILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 189 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 190 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 245 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 246 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 305 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 306 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 351 >gi|325276455|ref|ZP_08142220.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] gi|324098415|gb|EGB96496.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] Length = 251 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 13/210 (6%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V IW +++ R++V +++A +I +P+G+ +G H+ + P Sbjct: 44 TLASLVELLGQGEVYGHIW---VSLKRILVGLLLALLIGVPLGLLVGSYRHLEAATTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + + + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 I ++ ++ ++ E++ VL++ L+ Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFLLDAL 240 Score = 91.5 bits (226), Expect = 4e-16, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 14/221 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+ P+ + + L + + + R+L ++++LL L R L Sbjct: 34 GLSARFAPQATLASLVELLGQGEVYGHIWVSLKRILVGLLLALLIGVPLGLLVGSYRHLE 93 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 P ++ I L ++ V+ + F + + +W + + Sbjct: 94 AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + + ++SRS + W+ + VP + ++ + +++ W +V EM+ V Sbjct: 146 VRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G +I ++ +L + + FL D L Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFLLDAL 240 >gi|153955671|ref|YP_001396436.1| ABC transporter permease [Clostridium kluyveri DSM 555] gi|219856045|ref|YP_002473167.1| hypothetical protein CKR_2702 [Clostridium kluyveri NBRC 12016] gi|146348529|gb|EDK35065.1| Predicted ABC transporter, permease protein [Clostridium kluyveri DSM 555] gi|219569769|dbj|BAH07753.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 260 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 71/193 (36%), Gaps = 10/193 (5%) Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 + R+ + +A I + G IG + I P +L P + P+ + Sbjct: 68 ALYSCIRIFIGCTLALPIAVIFGFLIGLTKFGENFILPIFDMLRPIPQIAWIPIAILIFP 127 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + + + G + IL N IAG A + E A S + W+ RY+ P Sbjct: 128 SVEGS----IIFITFLGAFFPILVNTIAGTQAANSLLIEAAKSMSASKWQLIRYVSFPSA 183 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P TG G +W + I +E+ S G+G Y S +PE ++G++ + Sbjct: 184 VPNIFTGLTIGIGSSWMSVIAAEMISG------KYGIGYYTWTSYTLMQYPETIIGMITI 237 Query: 563 CCFVLALNRFLWH 575 + Sbjct: 238 GVIGAICFSLVRK 250 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 103/263 (39%), Gaps = 21/263 (7%) Query: 13 RRIFPNIFDLLAFVLVIGIINIL----LHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 ++I +F +L F++V ++ L P D+ + + Q+A + Sbjct: 12 KKILCKVFSILVFIIVWQLLVNLNIKRPLMFGNLPSPLDVFQTLKTIIIQKEFYQHALYS 71 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 +R+ ++L ++ L ++ ++PI D+++ IP + ++ ++ F Sbjct: 72 CIRIFIGCTLALPIAVIFGFLIGLTKFGENFILPIFDMLRPIPQIAWIPIAILIF----- 126 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E + IF F + + + L E ++S S WQ Y+ P + Sbjct: 127 ---PSVEGSIIFITFLGAFFPILVNTIAGTQAANSLLIEAAKSMSASKWQLIRYVSFPSA 183 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + + + W V+A+EMI GIG Y + + M+T+ Sbjct: 184 VPNIFTGLTIGIGSSWMSVIAAEMISGK------YGIGYYTWTSYTLMQYPETIIGMITI 237 Query: 249 LGVIFL---YDQLLFRPMIVWSN 268 + + + L + ++VW Sbjct: 238 GVIGAICFSLVRKLEKIILVWRE 260 >gi|162419458|ref|YP_001607863.1| glycine betaine transporter membrane protein [Yersinia pestis Angola] gi|162352273|gb|ABX86221.1| glycine betaine/L-proline ABC transporter, permease protein [Yersinia pestis Angola] Length = 388 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ ++ I + A T +L+++ + Sbjct: 133 LLGMPAPVAILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAMVTLALVLTSLFFCI 192 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 193 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 249 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 250 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 304 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 305 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 355 Score = 93.8 bits (232), Expect = 8e-17, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + P Sbjct: 95 PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQALLLGMPAPV-------- 140 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F + + ++ ++ + +T+ V+ + + Sbjct: 141 ---AILVFALIAWQFSTLSMGAATLISLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 193 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 194 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 249 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 250 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 309 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 310 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 355 >gi|296451763|ref|ZP_06893490.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296880165|ref|ZP_06904132.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296259397|gb|EFH06265.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296428890|gb|EFH14770.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 256 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 96/239 (40%), Gaps = 16/239 (6%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLI 394 Y + + V + W S + +I+ G I ++ R+++ Sbjct: 11 GYYIFFIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGF 70 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S++ IP+G+ G + +P + + + P P+++ + + Sbjct: 71 LISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESK----II 126 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++I + + I N + G N EV SF+++ R + II+P V G Sbjct: 127 IIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSRKRIFYKIIIPNSMLDIVVGLSLGL 186 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G ++ A I +E+ + ++GLG I++ + V++G+ ++ + + Sbjct: 187 GYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLF 239 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 99/247 (40%), Gaps = 15/247 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRD-IVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +++ I+ +L P + ++D + S+ + R+L +IS Sbjct: 15 FFIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGFLISS 74 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L + ++++ P+ + M+S P L + +++F K+I LA+ F Sbjct: 75 LMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESKIIIIILASFF 134 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + N L EV +SF LS + F+ + +P SM +V + + + Sbjct: 135 PIF--------LNTLKGIKNCDNKLIEVGKSFNLSRKRIFYKIIIPNSMLDIVVGLSLGL 186 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 + ++ +E+I G+G I+ +L + + + L D L Sbjct: 187 GYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLFS 240 Query: 261 RPMIVWS 267 + + +S Sbjct: 241 KIITKFS 247 >gi|194290581|ref|YP_002006488.1| ABC transporter ATP-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193224416|emb|CAQ70427.1| putative ABC-type transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 288 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 13/271 (4%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 ++ L + P L + V + + V + T Sbjct: 25 RRRHPWLAPLVPVAPNTRWMLGLSFFVLFFGVWAVVTLGGFVPRTFLADPMTMAREGMTL 84 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 I +T++RVV ++A++I +P+GI++G + +PF PA+ F Sbjct: 85 FTEYNFIGDIGMTVWRVVGGFVLAAVIAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAF 144 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL++ L++ G+ + I+ V D E A + Sbjct: 145 IPLLILWAGIGETQK----LLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGI 200 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R +++PG P G AW IV+E+ ++G+G I +S + Sbjct: 201 VRRVLIPGAAPEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTG 254 Query: 554 EVVLGVLIMCCFVLALNRFLWH---PLYLYG 581 +++ G++++ C L + L+ + Sbjct: 255 QIIFGIIVIGCIGLVSDLVFKRANQRLFPWS 285 Score = 92.7 bits (229), Expect = 2e-16, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 84/247 (34%), Gaps = 18/247 (7%) Query: 19 IFDLLAFVLVIGIINILLHGI----QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + L FVL G+ ++ G P + ++ T R++ Sbjct: 44 MLGLSFFVLFFGVWAVVTLGGFVPRTFLADPMTMAREGMTLFTEYNFIGDIGMTVWRVVG 103 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 V++ + + P + + +P F+ +++ K++ Sbjct: 104 GFVLAAVIAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLL-- 161 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 IF + + + ++ +DL E + + + + +P + P + Sbjct: 162 ------VIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGIVRRVLIPGAAPEIAE 215 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + + + W +V+ +E+I GIG I + + I++ ++ + + + Sbjct: 216 ILRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGCIGLV 269 Query: 255 YDQLLFR 261 D + R Sbjct: 270 SDLVFKR 276 >gi|254975037|ref|ZP_05271509.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-66c26] gi|255092426|ref|ZP_05321904.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile CIP 107932] gi|255314165|ref|ZP_05355748.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-76w55] gi|255649944|ref|ZP_05396846.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-37x79] gi|260683098|ref|YP_003214383.1| putative aliphatic sulfonate ABC transporter permease [Clostridium difficile CD196] gi|260686696|ref|YP_003217829.1| putative aliphatic sulfonate ABC transporter permease [Clostridium difficile R20291] gi|260209261|emb|CBA62574.1| putative aliphatic sulfonate ABC transporter, permease protein [Clostridium difficile CD196] gi|260212712|emb|CBE03807.1| putative aliphatic sulfonate ABC transporter, permease protein [Clostridium difficile R20291] Length = 256 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 97/239 (40%), Gaps = 16/239 (6%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLI 394 Y + + + V + W S + +I+ G I ++ R+++ Sbjct: 11 GYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGF 70 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 +I+S++ IP+G+ G + +P + + + P P+++ + + Sbjct: 71 LISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESK----II 126 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 ++I + + I N + G N EV SF+++ R + II+P V G Sbjct: 127 IIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSMLDIVVGLSLGL 186 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G ++ A I +E+ + ++GLG I++ + V++G+ ++ + + Sbjct: 187 GYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLF 239 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 101/257 (39%), Gaps = 14/257 (5%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 I +R L+ +L + + + P ++D + S+ + Sbjct: 5 IHKRFKGYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVR 64 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+L +IS L + ++++ P+ + M+S P L + +++F K Sbjct: 65 RILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESK 124 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +I LA+ F IF + + + N L EV +SF LS + F+ + +P SM Sbjct: 125 IIIIILASFFPIF--------LNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSML 176 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 +V + + + + ++ +E+I G+G I+ +L + + Sbjct: 177 DIVVGLSLGLGYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIFVIGF 230 Query: 251 VIFLYDQLLFRPMIVWS 267 + L D L + + +S Sbjct: 231 LGILSDYLFSKIITKFS 247 >gi|324994216|gb|EGC26130.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325697943|gb|EGD39827.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 574 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.9 bits (188), Expect = 9e-12, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|324990295|gb|EGC22233.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 574 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.9 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|21225809|ref|NP_631588.1| ABC-transport protein, membrane protein [Streptomyces coelicolor A3(2)] gi|289767037|ref|ZP_06526415.1| ABC-transporter [Streptomyces lividans TK24] gi|7799280|emb|CAB90902.1| putative ABC-transport protein, membrane component [Streptomyces coelicolor A3(2)] gi|289697236|gb|EFD64665.1| ABC-transporter [Streptomyces lividans TK24] Length = 267 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 97/264 (36%), Gaps = 17/264 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 RR P + + ++ L I + L + P ++VD + +L A + Sbjct: 17 SRSGRRGLPLVLNAVSVALGIALWWALASAGFKLPTPPEVVDRASTLIGDGTLADDALAS 76 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L + L L ++ P + ++IP L + VV Sbjct: 77 LTRVLIGFGLGTAVAVPVGFLMGWYGILRGLIEPWIQFFRTIPPLAIIPLAVVAMGIDET 136 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K IF IF + S +Q + N+ R L +R F + VP S Sbjct: 137 PK--------IFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVPAS 188 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 P ++ M + + W +VA+E+I G+G + A DL I ++++ Sbjct: 189 TPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLISI 242 Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269 + L D++L R + W + Sbjct: 243 GILGLLMDRVLLLAERRLTRWQER 266 Score = 130 bits (328), Expect = 6e-28, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 21/267 (7%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--------TYQDVLYVI 380 E+ + + R L + V G+A+ A S G+ + T + Sbjct: 11 ESAPERSRSGRRGLPLVLNAVSVALGIALWWALASAGFKLPTPPEVVDRASTLIGDGTLA 70 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ RV++ + + + +PVG +G+ + I+P+ Q P PL V Sbjct: 71 DDALASLTRVLIGFGLGTAVAVPVGFLMGWYGILRGLIEPWIQFFRTIPPLAIIPLAVVA 130 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + ++ + + G A + +++P Sbjct: 131 MGI----DETPKIFVIFLAAFLACVISTFQGVVNVDRTLINAARVLGAGDATIFARVVVP 186 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P+ + G G AW + +E+ + GLG + + P + +G++ Sbjct: 187 ASTPFILVGMRVGLGSAWATLVAAELIA------AQEGLGYRMQNAQLYYDLPTIFVGLI 240 Query: 561 IMCCFVLALNRFLW---HPLYLYGTRC 584 + L ++R L L + R Sbjct: 241 SIGILGLLMDRVLLLAERRLTRWQERR 267 >gi|325689416|gb|EGD31421.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 574 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.9 bits (188), Expect = 9e-12, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|294085667|ref|YP_003552427.1| ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292665242|gb|ADE40343.1| ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 295 Score = 130 bits (328), Expect = 6e-28, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 84/204 (41%), Gaps = 13/204 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R+ + IA+ + +P+G+++G+ + P +L P + PL + + + Sbjct: 97 VSCQRIAIAFAIATGVGVPLGLFMGWSRKVRDFAFPLLELFRPIPILAWVPLSILLLPGF 156 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L + + N + G + +D+ A + W ++ +++PG P Sbjct: 157 EG----PVIFLATLASLFVTTLNAMLGVDSIDDDYFRAAGCLGSSKWDVFKNVVVPGALP 212 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + TG + G AW + + +E+ S GLG I ++ +V+G++ + Sbjct: 213 FIFTGLQISIGVAWFSLVAAEMVSGDL------GLGYLIVDAYMNNVTVPMVIGMITLGF 266 Query: 565 FVL---ALNRFLWHPLYLYGTRCL 585 + R L L + R L Sbjct: 267 IGYVTSVMVRILGDKLMDWQVREL 290 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 17/210 (8%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ + R+ A I+ SR++ P+L++ + IPIL ++ +++ Sbjct: 93 EHIRVSCQRIAIAFAIATGVGVPLGLFMGWSRKVRDFAFPLLELFRPIPILAWVPLSILL 152 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 G E IF + ++ T + + +I D + S W F Sbjct: 153 L--------PGFEGPVIFLATLASLFVTTLNAMLGVDSIDDDYFRAAGCLGSSKWDVFKN 204 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + VP ++P + + +S+ WF +VA+EM+ G+G I A + ++ Sbjct: 205 VVVPGALPFIFTGLQISIGVAWFSLVAAEMVSG------DLGLGYLIVDAYMNNVTVPMV 258 Query: 243 YAMLTMLGVIF---LYDQLLFRPMIVWSNK 269 M+T+ + + + ++L ++ W + Sbjct: 259 IGMITLGFIGYVTSVMVRILGDKLMDWQVR 288 >gi|56695581|ref|YP_165931.1| taurine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56677318|gb|AAV93984.1| taurine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 290 Score = 130 bits (328), Expect = 6e-28, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 73/202 (36%), Gaps = 15/202 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRV+ +++ IP+G +G P + + P PLV+ Sbjct: 97 GFSLFRVIAGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 156 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+ W + +G S A S + + RY+I+P Sbjct: 157 GETGK----IILLFLAALWIMAIAARSGVSGVRISKVHAAYSLGASKAQIMRYVIVPNSL 212 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TGA A G W + +E+ + G G I +++ V++G++++ Sbjct: 213 PEIFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIMVASKFQLTDIVIMGIILIG 266 Query: 564 CFVLALNRFLWHPLYLYGTRCL 585 ++ + + R L Sbjct: 267 VIGFGIDILM-----RWAERVL 283 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 82/214 (38%), Gaps = 17/214 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L ++ + R+++ L S PI++ M+ +P L + Sbjct: 90 STLWEHLGFSLFRVIAGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPL 149 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++ GK I +F + +W M + + + + S S Q Sbjct: 150 VIIWAGIGETGK--------IILLFLAALWIMAIAARSGVSGVRISKVHAAYSLGASKAQ 201 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 Y+ VP S+P + ++M W VVA+E++ G G I +A K Q Sbjct: 202 IMRYVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIMVASKFQLT 255 Query: 239 LAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 ++ ++ + + F D L+ R ++ W +K Sbjct: 256 DIVIMGIILIGVIGFGIDILMRWAERVLVPWKSK 289 >gi|227822582|ref|YP_002826554.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] gi|227341583|gb|ACP25801.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 295 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +V+ +I + + P+ + + A RT + VIS++ Sbjct: 61 PIVLVVIVAIAWLASRNLRVVAGTMVTPLLIGYFDMWLDAMRTISMIFVCTVISIVVGLP 120 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 ++S RL ++ P+LD+MQ++P +L V+ G++ G I+A Sbjct: 121 IGIAMSRSDRLQRIVSPVLDVMQTMPSFVYLIPVVMLLG---IGRIPGLIAVVIYA---- 173 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + M + + RD+ E + +F S WQK + +P ++P ++ + ++ Sbjct: 174 -LPPMIRLTDLGIRLVDRDVLEAADAFGCSKWQKLRNVELPLALPTIMAGINQTIMMALA 232 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q ++ L ++G+ ++D++ Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278 Score = 80.0 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 88/284 (30%), Gaps = 15/284 (5%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 + F S F + N + R G + + + Sbjct: 5 SEFPHMNDESLRQFKLSIDNAFRTFTRNYGDFIEGLFAPLSKFLIWAERLMTQTPWPIVL 64 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII----WIPVGIW 407 V VAI +V +L + + R + +I + ++I +P+GI Sbjct: 65 VVIVAIAWLASRNLRVVAGTMVTPLLIGYFDMWLDAMRTISMIFVCTVISIVVGLPIGIA 124 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 + + + P ++ P+ V+ VV + + + ++ ++ Sbjct: 125 MSRSDRLQRIVSPVLDVMQTMPSFVYLIPVVMLLGIGR----IPGLIAVVIYALPPMIRL 180 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 G D E A +F + W+ R + LP P + G A +++ + Sbjct: 181 TDLGIRLVDRDVLEAADAFGCSKWQKLRNVELPLALPTIMAGINQTIMMALAMVVIASMI 240 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 241 G-------VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|262278786|ref|ZP_06056571.1| taurine transporter [Acinetobacter calcoaceticus RUH2202] gi|262259137|gb|EEY77870.1| taurine transporter [Acinetobacter calcoaceticus RUH2202] Length = 289 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 106/260 (40%), Gaps = 20/260 (7%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR------DIVDIVPITLDVH 59 + F R F + V+ I + LH + E +P + + Sbjct: 29 LSSFFEKHRTLAVSFISVGSVVAIWFLITALHVVPELFLPSPQAVWQKFISVSQEGFMKA 88 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 89 TLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLL 148 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++F E + IF S + + S + + + E + S S Q Sbjct: 149 VIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQV 200 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 FW++ +P ++P ++ + + + GW +VA+E++ GIG + A + Sbjct: 201 FWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITD 254 Query: 240 AILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 255 TVILGIIVIAIVAVSFELFL 274 >gi|324992122|gb|EGC24044.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] Length = 574 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|242278151|ref|YP_002990280.1| glycine/betaine ABC transporter permease [Desulfovibrio salexigens DSM 2638] gi|242121045|gb|ACS78741.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio salexigens DSM 2638] Length = 278 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 91/200 (45%), Gaps = 15/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + T ++ + +++LLF LAA ++ + +++P+LD+MQ++P +L Sbjct: 85 GLWKATVSTIALVIVSTLLALLFGIPIGILAAMNKHVNKIVMPVLDVMQTMPAFVYLIPA 144 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + +F ++AAIF+ + + +P +L E + +F + WQ+ Sbjct: 145 IPFFGLG--------KVAAIFSTIIFAMPPSIRLTCLGIKQVPEELVECAEAFGSNRWQR 196 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + L +P + P ++ + ++ VV + MI G+G + AI+ + Sbjct: 197 LFKLELPIATPTIMAGVNQTVMLALSMVVIAAMI-------GAKGLGGEVWKAIQRLQMG 249 Query: 240 AILYAMLTMLGVIFLYDQLL 259 A + ++ V + D++L Sbjct: 250 KGFEAGIGIVIVAMIMDRVL 269 Score = 81.1 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 77/235 (32%), Gaps = 11/235 (4%) Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIAS 398 + + + + + ++ + + + + T+ V+V ++A Sbjct: 46 KACPPWLFIFIVAAITLRLTKSKRTTIFSIAGLLLIWNIGLWKATVSTIALVIVSTLLAL 105 Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 + IP+GI H++ + P ++ PA V+ + + I Sbjct: 106 LFGIPIGILAAMNKHVNKIVMPVLDVMQTMPAFVYLIPAIPFFGLG----KVAAIFSTII 161 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 + G P + E A +F W+ + LP P + G A Sbjct: 162 FAMPPSIRLTCLGIKQVPEELVECAEAFGSNRWQRLFKLELPIATPTIMAGVNQTVMLAL 221 Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +++ + GLG + ++ ++ + + + + ++R L Sbjct: 222 SMVVIAAMIG-------AKGLGGEVWKAIQRLQMGKGFEAGIGIVIVAMIMDRVL 269 >gi|262281922|ref|ZP_06059691.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA] gi|262262376|gb|EEY81073.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA] Length = 574 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIISSAISIVIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|332364432|gb|EGJ42206.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK355] Length = 574 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|327459433|gb|EGF05779.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] Length = 574 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|295839824|ref|ZP_06826757.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptomyces sp. SPB74] gi|295827665|gb|EDY44702.2| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptomyces sp. SPB74] Length = 1148 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 18/235 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 +L+ GI+ +L + T ++ L D L + A + ++ A VI+L+ Sbjct: 49 LLLAGILAVLAFWLLGLTA--GVLSFAGFALIDSLELWEPAMNSFSLVVVATVIALIVGV 106 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 AA+S+R ++ P+LD Q++P + +L + +F P A I A Sbjct: 107 PLGIWAARSQRASAIVRPVLDFTQTMPAMVYLIPAIFFFGVGVP--------AGIVATII 158 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +L E + +F + + + + +P ++P ++ + + Sbjct: 159 FGFAPAVRMTELGIRQVDEELVEAADAFGTTPRKTLFGVQLPLALPTIMAGINQVIMLNL 218 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 VV + MI G + AI D+ A ++++ + D+++ Sbjct: 219 SMVVIAGMIGGGGLGGS-------VYQAIGNVDIGLGSEAGISIVILAIYLDRVV 266 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 12/229 (5%) Query: 346 IFWFCVVCGVAIGIAWQSIGYI-VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + ++ +A + + G + F D L + + VVV +IA I+ +P+ Sbjct: 49 LLLAGILAVLAFWLLGLTAGVLSFAGFALIDSLELWEPAMNSFSLVVVATVIALIVGVPL 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW S+ ++P PA V+ + + ++ + + +IFG Sbjct: 109 GIWAARSQRASAIVRPVLDFTQTMPAMVYL---IPAIFFFGVGVPAGIVATIIFG-FAPA 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F T + + LP P + G + +++ Sbjct: 165 VRMTELGIRQVDEELVEAADAFGTTPRKTLFGVQLPLALPTIMAGINQVIMLNLSMVVIA 224 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + G + + ++ + + + L+R + Sbjct: 225 GMIGGGGLGGS-------VYQAIGNVDIGLGSEAGISIVILAIYLDRVV 266 >gi|153955397|ref|YP_001396162.1| ABC transporter permease [Clostridium kluyveri DSM 555] gi|219855814|ref|YP_002472936.1| hypothetical protein CKR_2471 [Clostridium kluyveri NBRC 12016] gi|146348255|gb|EDK34791.1| Predicted ABC transporter, permease component [Clostridium kluyveri DSM 555] gi|219569538|dbj|BAH07522.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 205 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + +++ R +A ++ IP+G+ IG+ I P Q+ A FP+ Sbjct: 8 GSLFENVFVSLKRSAAGFALALLVAIPLGLVIGWFKKFERFIDPLLQIFRQTSALALFPV 67 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + ++ +G QW IL + I G + A S + + +R Sbjct: 68 FILVFGIGETSK----IAIIFWGVQWPILISTIEGVKNVDPILIKSARSMGASQFTIFRK 123 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILP FP +TG + A I +E+ ++GLG + ++ K P++ Sbjct: 124 VILPSAFPSIITGIRLSATSAILVLIAAEMMG------ASSGLGYLLYDTQVKYQIPKMY 177 Query: 557 LGVLIMCCFVLALNRFL 573 ++ M + +N + Sbjct: 178 AAIITMSLIGIIVNYTI 194 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 76/198 (38%), Gaps = 14/198 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL + + R + ++LL + ++ + P+L I + L Sbjct: 8 GSLFENVFVSLKRSAAGFALALLVAIPLGLVIGWFKKFERFIDPLLQIFRQTSALALFPV 67 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F E + I IF W + S + + N+ L + +RS S + Sbjct: 68 FILVFGIG--------ETSKIAIIFWGVQWPILISTIEGVKNVDPILIKSARSMGASQFT 119 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P ++ + +S + ++A+EM+ G+G + + + Sbjct: 120 IFRKVILPSAFPSIITGIRLSATSAILVLIAAEMMGASS------GLGYLLYDTQVKYQI 173 Query: 239 LAILYAMLTMLGVIFLYD 256 + A++TM + + + Sbjct: 174 PKMYAAIITMSLIGIIVN 191 >gi|327472840|gb|EGF18267.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] Length = 574 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|86361141|ref|YP_473028.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86285243|gb|ABC94301.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 295 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++ II ++ + + + + + RT + V+S+ Sbjct: 61 PIITLIILVIAWFASRSLKIVAGCLVTLMLIGYFDMWDDTMRTVSMIFVCTVLSIAIGIP 120 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L A+S RL V+ PILD+MQ++P +L V+ GKV G I+AI Sbjct: 121 IGILMARSDRLQRVVNPILDVMQTMPSFVYLIPVVMLLG---IGKVPGLIAVVIYAIP-- 175 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + +D+ E + +F S QK + + +P ++P ++ + ++ Sbjct: 176 ---PMIRLTDLGIRLVDKDVLEAADAFGTSRAQKLFKVQLPLALPTIMAGINQTIMMALA 232 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q ++ L ++G+ ++D++ Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278 Score = 84.2 bits (207), Expect = 6e-14, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 18/280 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 N + I F + ++ L L Q +L I WF Sbjct: 16 RNLKKAIDDGFRGFTRSYGDGIESLFVPLQHFLIAAERFMTQTPWPIITLIILVIAWFAS 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + ++ I + D + T+ + V +++ I IP+GI + Sbjct: 76 RSLKIVAGCLVTLMLIGYFDMWDDTMR-------TVSMIFVCTVLSIAIGIPIGILMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + + P ++ P+ V+ VV + + + ++ ++ G Sbjct: 129 DRLQRVVNPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A +F + + + LP P + G A +++ + Sbjct: 185 IRLVDKDVLEAADAFGTSRAQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|327459038|gb|EGF05386.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 574 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|325693734|gb|EGD35653.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 574 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|325688426|gb|EGD30444.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 574 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|271964562|ref|YP_003338758.1| binding-protein-dependent transporter inner membrane component [Streptosporangium roseum DSM 43021] gi|270507737|gb|ACZ86015.1| binding-protein-dependent transport systems inner membrane component [Streptosporangium roseum DSM 43021] Length = 280 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 88/248 (35%), Gaps = 13/248 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 S +L + ++ V+ + I + T ++ ++ RV+ ++ Sbjct: 43 GSGLLGLVFWVVLANIGIQGFPGPLEVAERAVTSIGDGTLLGDALASLRRVLTGFVLGVA 102 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +PVG +G+ P I I+P+ Q P PL + + ++ Sbjct: 103 LAVPVGFLMGWYPVIRGLIEPWLQFFRMVPPLAIIPLAIVLMGI----DETPKIFVIFLA 158 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + + G + + A + +++P P+ + G G +W Sbjct: 159 SFLSSVVSTFQGVVSVDSTLINAARVLGAKDRTVFTGVVVPASTPFILVGMRIGLGASWA 218 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576 + +E+ + GLG + ++ P + + ++++ L ++R L Sbjct: 219 TVVAAELIA------AQEGLGYRMQQAQLYYDLPTIFVQLIVIGLIGLIMDRALLLAERR 272 Query: 577 LYLYGTRC 584 L + R Sbjct: 273 LTNWQERR 280 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 95/264 (35%), Gaps = 18/264 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 R P LV ++ + GIQ P ++ + ++ +L A + Sbjct: 31 SRTRRSTLPLTIGSGLLGLVFWVV-LANIGIQGFPGPLEVAERAVTSIGDGTLLGDALAS 89 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L+ V+ + L + ++ P L + +P L + +V Sbjct: 90 LRRVLTGFVLGVALAVPVGFLMGWYPVIRGLIEPWLQFFRMVPPLAIIPLAIVLMGIDET 149 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K IF IF + + S +Q + ++ L +R F + VP S Sbjct: 150 PK--------IFVIFLASFLSSVVSTFQGVVSVDSTLINAARVLGAKDRTVFTGVVVPAS 201 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 P ++ M + + W VVA+E+I G+G + A DL I ++ + Sbjct: 202 TPFILVGMRIGLGASWATVVAAELIA------AQEGLGYRMQQAQLYYDLPTIFVQLIVI 255 Query: 249 LGVIFLYDQLLF---RPMIVWSNK 269 + + D+ L R + W + Sbjct: 256 GLIGLIMDRALLLAERRLTNWQER 279 >gi|268590427|ref|ZP_06124648.1| glycine betaine/L-proline transport system permease protein ProW [Providencia rettgeri DSM 1131] gi|291314341|gb|EFE54794.1| glycine betaine/L-proline transport system permease protein ProW [Providencia rettgeri DSM 1131] Length = 391 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 L + + II L Q + + I + A T +L++++ + Sbjct: 135 LTSLPAPVAIIIFALLTWQLAGRAMGVATFISMIAIGAIGAWSEAMVTLSLVLTSLLFCI 194 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 195 VIGLPLGIWLARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 251 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 252 A-----LPPIIRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 306 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+ Sbjct: 307 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRF 357 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 95/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV + +P+ + + L + L + Q Sbjct: 97 PLDSWVTHAIDWVVLN--FRPVFQGIRAPIDFILSGFEQFLTSLPAPVAIIIFALLTWQL 154 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + F + + AW +T+ V+ ++ + Sbjct: 155 AGRAMGVATFISMIAIGAIGAWS-------------------EAMVTLSLVLTSLLFCIV 195 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 196 IGLPLGIWLARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 251 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + + LP P + G A + Sbjct: 252 ALPPIIRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 311 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+RF Sbjct: 312 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRF 357 >gi|73542404|ref|YP_296924.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gi|72119817|gb|AAZ62080.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 284 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 95/261 (36%), Gaps = 10/261 (3%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + ++ L + P L + V + + V Sbjct: 18 AAPARRRHPWLSPLVPVSPHARWVLGLSFFVLFFAVWALVTLGGFVPRTFLADPATMAHE 77 Query: 370 HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 T I +T++RV+ ++A+++ +P+GI +G + +PF P Sbjct: 78 GLTLFAQYNFIGDIGMTVWRVLGGFVLAAVLAVPLGILMGAYKAAEAFFEPFVSFCRYLP 137 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 A+ F PL++ L++ G+ + I+ V D E A + + Sbjct: 138 ASAFIPLLILWAGIGETQK----LLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGAS 193 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 + +++PG P G AW IV+E+ ++G+G I +S Sbjct: 194 SRGIVKRVLIPGAAPEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQAL 247 Query: 550 GSFPEVVLGVLIMCCFVLALN 570 + +++ G++++ C L + Sbjct: 248 LNTGQIIFGIIVIGCIGLVSD 268 Score = 93.8 bits (232), Expect = 7e-17, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 81/239 (33%), Gaps = 15/239 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + F V ++ + + P + ++ T R+L V++ Sbjct: 47 FVLFFAVWALVTLGGFVPRTFLADPATMAHEGLTLFAQYNFIGDIGMTVWRVLGGFVLAA 106 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + L + P + + +P F+ +++ K++ Sbjct: 107 VLAVPLGILMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLL-------- 158 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + ++ +DL E + + S + +P + P + + + + Sbjct: 159 VIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGASSRGIVKRVLIPGAAPEIAEILRLVL 218 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W +V+ +E+I GIG I + + I++ ++ + + + D + Sbjct: 219 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGCIGLVSDLVF 271 >gi|193077101|gb|ABO11872.2| ABC taurine transporter permease subunit [Acinetobacter baumannii ATCC 17978] Length = 289 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + SE+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 88 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW++ +P ++P ++ + + + GW +VASE++ GIG + A + Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLIT 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274 >gi|328945845|gb|EGG39996.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 574 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMSTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|160895595|ref|YP_001561177.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] gi|160361179|gb|ABX32792.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] Length = 296 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 11/261 (4%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV 376 R + + P L V + L + V+ + Sbjct: 37 RRRMAPLEPVSPTAKWVLGVAFFVLFFLVWAAVTLGGFVSPTFLASPMTMAREGVLLFTE 96 Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + +T++RV+ I+AS++ +P+GI +G + + +PF PA+ F PL Sbjct: 97 YGFLHDIGMTVWRVMGGFILASVVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPL 156 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ L++ G+ + I V D E A + + R Sbjct: 157 LILWAGVGETQK----LLVIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGVVRR 212 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++PG P G AW IV+E+ ++G+G I +S + +++ Sbjct: 213 VLIPGAAPGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQII 266 Query: 557 LGVLIMCCFVLALNRFLWHPL 577 G++++ L + F++ L Sbjct: 267 FGIIVIGLIGLVSD-FIFKSL 286 Score = 99.2 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 88/250 (35%), Gaps = 18/250 (7%) Query: 22 LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + F LV + + P + + + T R++ +++ Sbjct: 59 FVLFFLVWAAVTLGGFVSPTFLASPMTMAREGVLLFTEYGFLHDIGMTVWRVMGGFILAS 118 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + P + + +P F+ +++ K++ Sbjct: 119 VVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVGETQKLL-------- 170 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF V+ +T + ++ +DL E + + S + +P + PG+ + + + Sbjct: 171 VIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGVVRRVLIPGAAPGIAETLRLVL 230 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258 W +V+ +E+I GIG I + + I++ ++ + + + D + Sbjct: 231 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDFIFK 284 Query: 259 -LFRPMIVWS 267 L R M WS Sbjct: 285 SLNRRMFEWS 294 >gi|332358183|gb|EGJ36013.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1056] Length = 574 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|319779828|ref|YP_004139304.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165716|gb|ADV09254.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 295 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L+I + L + + + ++ +T +L + +I+++ Sbjct: 61 PLIISLAAGLAWLASRNLTTVAGTVVTLVAIGFLNMWDDTMKTVSMILVSTIIAIVLGAP 120 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 ++S R+ V+ P+LD+MQ++P +L V+ GKV G I+AI Sbjct: 121 VGIAMSRSERIQRVINPVLDVMQTMPSFVYLIPVVMLLG---IGKVPGVIAVVIYAIP-- 175 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + +D+ E + +F S WQK + +P ++P ++ + ++ Sbjct: 176 ---PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLRDVQIPLALPTIMAGVNQTIMMALA 232 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q L+ L ++G+ ++D++ Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAINNQYFTLGLFNGLAIVGIAIIFDRI 278 Score = 80.4 bits (197), Expect = 8e-13, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 17/230 (7%) Query: 349 FCVVCGVAIGIAWQSIGYI------VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 + ++ +A G+AW + + V L + T+ ++V IIA ++ Sbjct: 60 WPLIISLAAGLAWLASRNLTTVAGTVVTLVAIGFLNMWDDTMKTVSMILVSTIIAIVLGA 119 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 PVGI + I I P ++ P+ V+ VV + + + ++ Sbjct: 120 PVGIAMSRSERIQRVINPVLDVMQTMPSFVYLIPVVMLLGIG----KVPGVIAVVIYAIP 175 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 ++ G D E A +F + W+ R + +P P + G A + Sbjct: 176 PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLRDVQIPLALPTIMAGVNQTIMMALAMVV 235 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++ + GLG + ++ F + L + + +R Sbjct: 236 IASMIG-------VQGLGQPVLKAINNQYFTLGLFNGLAIVGIAIIFDRI 278 >gi|333028233|ref|ZP_08456297.1| putative glycine betaine ABC transport system permease [Streptomyces sp. Tu6071] gi|332748085|gb|EGJ78526.1| putative glycine betaine ABC transport system permease [Streptomyces sp. Tu6071] Length = 1116 Score = 130 bits (327), Expect = 8e-28, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 18/235 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 +L+ GI+ +L ++ T ++ V L D L + A + ++ A VI+L+ Sbjct: 15 LLLAGILAVLAFWLRGLTA--GVLSFVGFALIDSLELWEPAMNSFALVIVATVIALVIGV 72 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 A+S+R V+ P+LD Q++P + +L + +F P A I A Sbjct: 73 PLGIWTARSQRASAVVRPLLDFTQTMPAMVYLIPAIFFFGLGVP--------AGIVATII 124 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +L E + +F + + + +P ++P ++ + + Sbjct: 125 FGFAPAVRMTELGIRQVDEELVEAADAFGTTPRKTLLGVQLPLALPTIMAGVNQVIMLNL 184 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 VV + M+ G + AI D+ A ++++ + D+++ Sbjct: 185 SMVVIAGMVGAGGLGGS-------VYQAIGNVDIGLGSEAGVSIVVLAIFLDRVV 232 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 75/229 (32%), Gaps = 13/229 (5%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + V +++ + D L + + V+V +IA +I +P+ Sbjct: 15 LLLAGILAVLAFWLRGLTAGVLSFVGFALIDSLELWEPAMNSFALVIVATVIALVIGVPL 74 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW S+ ++P PA V+ + + ++ L + +IFG Sbjct: 75 GIWTARSQRASAVVRPLLDFTQTMPAMVYL---IPAIFFFGLGVPAGIVATIIFG-FAPA 130 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F T + + LP P + G + +++ Sbjct: 131 VRMTELGIRQVDEELVEAADAFGTTPRKTLLGVQLPLALPTIMAGVNQVIMLNLSMVVIA 190 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + G + + ++ + + + L+R + Sbjct: 191 GMVGAGGLGGS-------VYQAIGNVDIGLGSEAGVSIVVLAIFLDRVV 232 >gi|323353440|ref|ZP_08087973.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322121386|gb|EFX93149.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 574 Score = 130 bits (327), Expect = 8e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|313498427|gb|ADR59793.1| Binding-protein-dependent transport systems inner membrane component [Pseudomonas putida BIRD-1] Length = 251 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 13/210 (6%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V IW +++ R++V +++A ++ +P+G+ +G H+ + P Sbjct: 44 TLASLVELLGQGEVYGHIW---VSLKRILVGLLLALLMGVPLGLLVGSYRHLEAATTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + + + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 I ++ ++ ++ E++ VL++ L+ Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240 Score = 90.8 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 80/221 (36%), Gaps = 14/221 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+ P + + L + + + R+L ++++LL L R L Sbjct: 34 GLSARFSPAATLASLVELLGQGEVYGHIWVSLKRILVGLLLALLMGVPLGLLVGSYRHLE 93 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 P ++ I L ++ V+ + F + + +W + + Sbjct: 94 AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + + ++SRS + W+ + VP + ++ + +++ W +V EM+ V Sbjct: 146 VRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G +I ++ +L + + F+ D L Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240 >gi|222081336|ref|YP_002540699.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter K84] gi|221726015|gb|ACM29104.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter K84] Length = 268 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 10/193 (5%) Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ ++ RVV+ + + + +P+G+ +G I + P Q L P + PL Sbjct: 67 ELLGDLLASLQRVVLGFAVGAGLALPLGLLMGTDKTIERYLNPVIQFLRPIPPIAYIPLA 126 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + N L+ G + +L N I+G + + A++ +R + Sbjct: 127 ILWFGLG----NPPAIFLIAIGAFFPVLINTISGVRNVDSIYVRAATNLGADRLTLFRRV 182 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILP PY +TG G A+ IV+E+ + +GLG I E+ E +V+ Sbjct: 183 ILPAATPYILTGMRIGIGTAFIVVIVAEMIA------VNSGLGYRILEAREYMWSDKVIA 236 Query: 558 GVLIMCCFVLALN 570 G++ + LA++ Sbjct: 237 GMIAIGLLGLAID 249 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 14/203 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + R++ + L + + L P++ ++ IP + ++ Sbjct: 66 SELLGDLLASLQRVVLGFAVGAGLALPLGLLMGTDKTIERYLNPVIQFLRPIPPIAYIPL 125 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P AIF I + + + + N+ + + Sbjct: 126 AILWFGLGNPP--------AIFLIAIGAFFPVLINTISGVRNVDSIYVRAATNLGADRLT 177 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P ++ M + + + V+ +EMI V G+G I A + Sbjct: 178 LFRRVILPAATPYILTGMRIGIGTAFIVVIVAEMIAVNS------GLGYRILEAREYMWS 231 Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261 ++ M+ + + D + R Sbjct: 232 DKVIAGMIAIGLLGLAIDIGVNR 254 >gi|27378302|ref|NP_769831.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351449|dbj|BAC48456.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 301 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 77/189 (40%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R+ + +A+I+ +P+G+ +G + I P A++L PA + P+ + Sbjct: 110 LSCRRIFIGFSLAAIVGVPLGLIMGRFKLVHEIIFPVAEVLRPIPAIAWVPMAIML---- 165 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + G+ + IL N + G S A +R + P P Sbjct: 166 WPTNEQSIVFITFLGSFFPILVNTLHGMSLVDPVLVRAAQCLGARERSIFREVYFPASLP 225 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + TG G AW + I +E+ S + G+G + E+ + ++ LG++ + Sbjct: 226 HIFTGLTVGMGVAWVSLIAAEMISGQY------GIGYFTWEAYSLVQYADIALGMIAIGV 279 Query: 565 FVLALNRFL 573 L + + Sbjct: 280 LGLGSSLLI 288 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 85/251 (33%), Gaps = 18/251 (7%) Query: 13 RRIFPNIFDLLAFVLVIGII----NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 R I L+AF+LV ++ + P + + + + Sbjct: 52 RATAIGIASLIAFLLVWHLLTTYRVVFFVRFTNVPSPLAVYASFTKAIHDPKFLMHIVLS 111 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ ++ + + + + + ++ P+ ++++ IP + ++ ++ + Sbjct: 112 CRRIFIGFSLAAIVGVPLGLIMGRFKLVHEIIFPVAEVLRPIPAIAWVPMAIMLW----- 166 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E + +F F + + + + + L ++ F + P S Sbjct: 167 ---PTNEQSIVFITFLGSFFPILVNTLHGMSLVDPVLVRAAQCLGARERSIFREVYFPAS 223 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + + M W ++A+EMI GIG + A I M+ + Sbjct: 224 LPHIFTGLTVGMGVAWVSLIAAEMISG------QYGIGYFTWEAYSLVQYADIALGMIAI 277 Query: 249 LGVIFLYDQLL 259 + L+ Sbjct: 278 GVLGLGSSLLI 288 >gi|332364733|gb|EGJ42502.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1059] Length = 574 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|219870515|ref|YP_002474890.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Haemophilus parasuis SH0165] gi|219690719|gb|ACL31942.1| ABC-type nitrate/sulfonate/bicarbonate transport permease [Haemophilus parasuis SH0165] Length = 245 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 94/234 (40%), Gaps = 14/234 (5%) Query: 344 LDIFWFCVVCGVA----IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 L +FW +A I + + + + + ++ R++V + +A + Sbjct: 15 LVLFWQAGTLLLAQHIQIATDLSPLQTLNSLYALSISGEIFPHIWASVQRIIVGLTVALL 74 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 IP+G+ +G + P Q L + P+VV + L + L+ F Sbjct: 75 CGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLGVGDL----PVYFLIAFA 130 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 W ++ + +G + + ++ S + +II+P I + +TG + G AW Sbjct: 131 AIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPAITGHILTGLRVSLGIAWV 190 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + E+ GLG +I ++ ++ ++ E++ V+++ L+ L Sbjct: 191 VLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAVIVIGLIGWGLDSLL 238 Score = 104 bits (259), Expect = 6e-20, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 93/252 (36%), Gaps = 17/252 (6%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASR 67 + R L++ VL +LL + P ++ + + + Sbjct: 1 MKRNYLYGFTGLISLVLFWQAGTLLLAQHIQIATDLSPLQTLNSLYALSISGEIFPHIWA 60 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R++ + ++LL S+ L M P ++ I L ++ V++ Sbjct: 61 SVQRIIVGLTVALLCGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLGVG- 119 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 +L F I + +W++ S + +I +SRS S + ++ VP Sbjct: 120 -------DLPVYFLIAFAAIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPA 172 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++ + +S+ W +V EM+ V + G+G +I ++ A++ Sbjct: 173 ITGHILTGLRVSLGIAWVVLVPCEMLGVNE------GLGYFILDTRDRLAYSELMAAVIV 226 Query: 248 MLGVIFLYDQLL 259 + + + D LL Sbjct: 227 IGLIGWGLDSLL 238 >gi|293608377|ref|ZP_06690680.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|299770528|ref|YP_003732554.1| Taurine transport system permease protein tauC [Acinetobacter sp. DR1] gi|292828950|gb|EFF87312.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|298700616|gb|ADI91181.1| Taurine transport system permease protein tauC [Acinetobacter sp. DR1] Length = 289 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQAQVFWHVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 88 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQAQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW++ +P ++P ++ + + + GW +VA+E++ GIG + A + Sbjct: 200 VFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFMVQSAAQFLIT 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274 >gi|332363182|gb|EGJ40967.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK49] Length = 574 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|288574240|ref|ZP_06392597.1| binding-protein-dependent transport systems inner membrane component [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569981|gb|EFC91538.1| binding-protein-dependent transport systems inner membrane component [Dethiosulfovibrio peptidovorans DSM 11002] Length = 257 Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 74/199 (37%), Gaps = 10/199 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + + FRV+ I++ +P+G +G P P L P P+ Sbjct: 53 GSLARHTGASCFRVLTGFAISTATAVPLGFVLGLSPEARRLTDPTLDFLRHIPPLAVMPM 112 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ + +++I T + +L N G + EV F ++ R + Sbjct: 113 LILWFGIGEPSK----IVVIIMATFFPLLLNTRKGVDSCDKGLLEVGKVFGMSRKRRFME 168 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP P + G +W + I +E+ + ++G+G I ++ + +V Sbjct: 169 ILLPSALPSVLVGMRVGLSYSWRSLIGAELIA------ASSGIGYAIHDAEQLSRSDVIV 222 Query: 557 LGVLIMCCFVLALNRFLWH 575 L V++M + Sbjct: 223 LWVILMGIVGSLSDHAFLR 241 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 97/255 (38%), Gaps = 17/255 (6%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 +F + + + + P ++ + + SL ++ + R+L+ I Sbjct: 13 LFPAVVLSIWWLGSSTEMWNGYVIPNPGRVLQALQDAVADGSLARHTGASCFRVLTGFAI 72 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 S + S + P LD ++ IP L + +++F P K Sbjct: 73 STATAVPLGFVLGLSPEARRLTDPTLDFLRHIPPLAVMPMLILWFGIGEPSK-------- 124 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 I I + + + + + + + + L EV + F +S ++F + +P ++P ++ M + Sbjct: 125 IVVIIMATFFPLLLNTRKGVDSCDKGLLEVGKVFGMSRKRRFMEILLPSALPSVLVGMRV 184 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 +S W ++ +E+I GIG I A + I+ ++ M V L D Sbjct: 185 GLSYSWRSLIGAELIAASS------GIGYAIHDAEQLSRSDVIVLWVILMGIVGSLSDHA 238 Query: 259 LFRP---MIVWSNKF 270 R + W F Sbjct: 239 FLRLSLKLTPWEGTF 253 >gi|116249179|ref|YP_765020.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253829|emb|CAK12224.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 295 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++ II ++ + + + + + RT + V+S+ Sbjct: 61 PIITAIILVIAWFASRSLKVVLGCLVTLLLIGYFDMWDDTMRTVSMIFVCTVLSIAIGIP 120 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L A+S RL ++ PILD+MQ++P +L V+ GKV G I+AI Sbjct: 121 MGILMARSDRLQRIINPILDVMQTMPSFVYLIPVVMLLG---IGKVPGLIAVVIYAIP-- 175 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + +D+ E + +F S QK + + +P ++P ++ + ++ Sbjct: 176 ---PMIRLTDLGIRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALA 232 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q ++ L ++G+ ++D++ Sbjct: 233 MVVVASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278 Score = 83.8 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 87/280 (31%), Gaps = 18/280 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 N + I F + ++ L L Q + +L I WF Sbjct: 16 RNLKKAIDDGFRAFTRTYGDAIESLFSPLQHFLIAADRFMTQTPWPIITAIILVIAWFAS 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + ++ I + D + T+ + V +++ I IP+GI + Sbjct: 76 RSLKVVLGCLVTLLLIGYFDMWDDTMR-------TVSMIFVCTVLSIAIGIPMGILMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + I P ++ P+ V+ VV + + + ++ ++ G Sbjct: 129 DRLQRIINPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A +F + + + LP P + G A +V+ + Sbjct: 185 IRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALAMVVVASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|113868975|ref|YP_727464.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527751|emb|CAJ94096.1| ABC-type transporter, permease component: TauT family [Ralstonia eutropha H16] Length = 289 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 105/271 (38%), Gaps = 23/271 (8%) Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVNHFTYQDVLYVI 380 R P + +ML + +F + G+ + ++ + T +++ Sbjct: 26 RRRHPWLAPLVPVAPNTRWMLGLSFFVLFFGIWAVVTLGGFVPRTFLADPMTMAKEGFIL 85 Query: 381 WL-------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + +T++RVV ++A+++ +P+GI++G + +PF PA+ F Sbjct: 86 FTEHNFIGDIGMTVWRVVGGFVLAAVLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAF 145 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL++ L++ G+ + I+ V D E A + Sbjct: 146 IPLLILWAGIGETQK----LLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGI 201 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R +++PG P G AW IV+E+ ++G+G I +S + Sbjct: 202 VRRVLIPGAAPEIAEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTG 255 Query: 554 EVVLGVLIMCCFVLALNRFLWH---PLYLYG 581 +++ G++++ C L + L+ + Sbjct: 256 QIIFGIIVIGCIGLVSDLVFKRANQRLFPWS 286 Score = 93.5 bits (231), Expect = 9e-17, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 82/241 (34%), Gaps = 15/241 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + F + ++ + + P + I H+ T R++ V++ Sbjct: 51 FVLFFGIWAVVTLGGFVPRTFLADPMTMAKEGFILFTEHNFIGDIGMTVWRVVGGFVLAA 110 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + P + + +P F+ +++ K++ Sbjct: 111 VLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLL-------- 162 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + ++ +DL E + + + + +P + P + + + + Sbjct: 163 VIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGANSAGIVRRVLIPGAAPEIAEILRLVL 222 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 W +V+ +E+I GIG I + + I++ ++ + + + D + Sbjct: 223 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGCIGLVSDLVFK 276 Query: 261 R 261 R Sbjct: 277 R 277 >gi|255306450|ref|ZP_05350621.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile ATCC 43255] Length = 229 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 84/197 (42%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + ++ R+++ +I+S++ IP+G+ G + +P + + + P P+ Sbjct: 26 GSIFLNVYASVRRILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPM 85 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ + +++I + + I N + G N EV SF+++ R + Sbjct: 86 LILWFGIGEESK----IIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYK 141 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 II+P V G G ++ A I +E+ + ++GLG I++ + V+ Sbjct: 142 IIIPNSMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVL 195 Query: 557 LGVLIMCCFVLALNRFL 573 +G+ ++ + + Sbjct: 196 VGIFVIGFLGILSDYLF 212 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 14/201 (6%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+L +IS L L ++++ P+ + M+S P L + +++F Sbjct: 34 ASVRRILIGFLISSLMAIPLGVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIG 93 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 K+I LA+ F IF + + + N L EV +SF LS + F+ + +P Sbjct: 94 EESKIIIIILASFFPIF--------LNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIP 145 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 SM +V + + + + ++ +E+I G+G I+ +L + Sbjct: 146 NSMLDIVVGLSLGLGYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIF 199 Query: 247 TMLGVIFLYDQLLFRPMIVWS 267 + + L D L + + +S Sbjct: 200 VIGFLGILSDYLFSKIITKFS 220 >gi|332531267|ref|ZP_08407180.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] gi|332039374|gb|EGI75787.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] Length = 257 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 102/264 (38%), Gaps = 13/264 (4%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 ++ L V + +F + V+ + + I Sbjct: 2 APLQPVSARARWLLGLGFFVVFFGVWAFFTLGGYVSSTFLASPLTMAREGWLLFTEFNFI 61 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +T++RV+ ++A++I +P+GI +G + + ++PF PA+ F PL++ Sbjct: 62 HDIGMTVWRVLGGFVLAAVIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILW 121 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L L++ G+ + I+ V A D E A + + + +++P Sbjct: 122 AGIGELQK----VLVIFIGSVFQIVLMVAVTVGAARKDLVEAAYTLGASNGGIVKRVLIP 177 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P G AW IV+E+ ++G+G I +S + +++ G++ Sbjct: 178 GAAPEIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGII 231 Query: 561 IMCCFVLALN---RFLWHPLYLYG 581 ++ L + + L L+ + Sbjct: 232 VIGLIGLVSDFAFKALNRRLFAWS 255 Score = 95.0 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 85/250 (34%), Gaps = 18/250 (7%) Query: 22 LLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + F V + + P + + + T R+L V++ Sbjct: 20 FVVFFGVWAFFTLGGYVSSTFLASPLTMAREGWLLFTEFNFIHDIGMTVWRVLGGFVLAA 79 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + L P + + +P F+ +++ EL + Sbjct: 80 VIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGIG--------ELQKVL 131 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF V+ + + ++ +DL E + + S + +P + P + + + + Sbjct: 132 VIFIGSVFQIVLMVAVTVGAARKDLVEAAYTLGASNGGIVKRVLIPGAAPEIAETLRLVL 191 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ--- 257 W +V+ +E+I GIG I + + I++ ++ + + + D Sbjct: 192 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDFAFK 245 Query: 258 LLFRPMIVWS 267 L R + WS Sbjct: 246 ALNRRLFAWS 255 >gi|295111098|emb|CBL27848.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Synergistetes bacterium SGP1] Length = 278 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 30/239 (12%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + ++ ++ ++ RV ++A + +P+G+ +G+ ++ + A L Sbjct: 45 LLHPTKDLLNMGSLVGNVTVSFVRVFGGYLLAVFVAVPLGLAMGYWNWLNRMLGLMAGLF 104 Query: 426 AAFPANVFFPLVVSCVSY----------------YHLNPNLWLSLLMIFGTQWYILFNVI 469 P + PLV++ + N + + ++ G + IL N I Sbjct: 105 RPIPPLSWIPLVLAWFGVASMATILGIEEGAWYPFFSNIKISMLFIIFIGAFFPILVNTI 164 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G + + + W+ RY+ILP P TG G AW + +E+ Sbjct: 165 GGVQSVRVTLIDAVRVLGASPWQVVRYVILPYAAPQVFTGLRVGLGVAWMCLVSAEMMPG 224 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---------WHPLYL 579 +G+G I + V+ G++ + + ++ W LY Sbjct: 225 -----SISGVGYLITHAYTVAQTDVVIAGMIAIGVMGILIDSLFILIERRAFQWQSLYR 278 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 89/231 (38%), Gaps = 20/231 (8%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L++ SL + + +R+ ++++ L +L + + + IP L + Sbjct: 53 LNMGSLVGNVTVSFVRVFGGYLLAVFVAVPLGLAMGYWNWLNRMLGLMAGLFRPIPPLSW 112 Query: 116 LTFTVVYFMNLYPGKVIGAELAA------------IFAIFTSQVWNMTFSMYQSLCNIPR 163 + + +F ++G E A +F IF + + + + ++ Sbjct: 113 IPLVLAWFGVASMATILGIEEGAWYPFFSNIKISMLFIIFIGAFFPILVNTIGGVQSVRV 172 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L + R S WQ Y+ +P++ P + + + + W +V++EM+ + Sbjct: 173 TLIDAVRVLGASPWQVVRYVILPYAAPQVFTGLRVGLGVAWMCLVSAEMMPG-----SIS 227 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 G+G I A ++ M+ + + L D L+ R W + +R Sbjct: 228 GVGYLITHAYTVAQTDVVIAGMIAIGVMGILIDSLFILIERRAFQWQSLYR 278 >gi|327468560|gb|EGF14039.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 574 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|327490635|gb|EGF22416.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 574 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ IP +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQIPTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + P + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQIPTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|237740106|ref|ZP_04570587.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|294782809|ref|ZP_06748135.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA] gi|229422123|gb|EEO37170.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|294481450|gb|EFG29225.1| ABC transporter, permease protein [Fusobacterium sp. 1_1_41FAA] Length = 250 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 83/189 (43%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+ I+S++ I +GI++G Q + P + PL++ Sbjct: 59 LSLRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLTLTAIRQIPMIAWIPLIILWAGIG 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ ++++F + I+ N + G + + EVA + ++ + + LP P Sbjct: 119 EVSK----IVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYLPSALP 174 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG G +W A + SE+ + ++G+G + ++ V++ ++I+ Sbjct: 175 NIFTGLRLGLGASWMAVVASELIA------SSSGIGYRLNDARSLMRSDVVIVCMIIIGL 228 Query: 565 FVLALNRFL 573 L +++ + Sbjct: 229 VGLLMDKLI 237 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 79/204 (38%), Gaps = 14/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L S + R+L+ IS + S + L ++ IP++ + Sbjct: 48 LKSGQLSNDLSLSLRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLTLTAIRQIPMIAW 107 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + +++ E++ I I + + + + + + EV++ + LS Sbjct: 108 IPLIILWAGIG--------EVSKIVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLS 159 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 F+ + +P ++P + + + + W VVASE+I GIG + A Sbjct: 160 KKDTFFKVYLPSALPNIFTGLRLGLGASWMAVVASELIASSS------GIGYRLNDARSL 213 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 ++ M+ + V L D+L+ Sbjct: 214 MRSDVVIVCMIIIGLVGLLMDKLI 237 >gi|304397785|ref|ZP_07379661.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] gi|304354496|gb|EFM18867.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. aB] Length = 275 Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 99/269 (36%), Gaps = 19/269 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381 R +P + S +S +L ++W G+ + S + + Sbjct: 13 RRRLRWPFSTTFTLSMLSLSLLLLLWWGVTALGLIAPLFLPSPQQVFSKLLLIASAQGFM 72 Query: 382 LG------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+++ + A++I IPVGI +G P + P +L P + P Sbjct: 73 DATLWQHLAASLTRMLIALTAAAVIGIPVGILMGLSPVARGLLDPLIELYRPIPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG A S W+ R Sbjct: 133 LMVIWFGIGETSK----ILLISLAIFAPVTLSTLAGVRNTQQVRIRAARSLGANRWQLLR 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 WVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLYG 581 + G+ ++ +L R L L + Sbjct: 243 LAGIAVIAFIAFSLELGLRALQRRLTPWS 271 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 101/250 (40%), Gaps = 15/250 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 V +G+I L + + ++ +L Q+ + + RML A+ + + Sbjct: 41 VTALGLIAPLFLPSPQQVFSKLLLIASAQGFMDATLWQHLAASLTRMLIALTAAAVIGIP 100 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L S +L P++++ + IP L +L V++F K++ LA Sbjct: 101 VGILMGLSPVARGLLDPLIELYRPIPPLAYLPLMVIWFGIGETSKILLISLAIFA----- 155 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +T S + N + +RS + WQ ++ +P ++P ++ + + + GW Sbjct: 156 ---PVTLSTLAGVRNTQQVRIRAARSLGANRWQLLRWVILPGALPEILTGLRIGLGVGWS 212 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 +VA+E+I G+G + A E ++ A + ++ I +L R + Sbjct: 213 TLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAFIAFSLELGLRALQR 265 Query: 266 WSNKFRLERT 275 + E++ Sbjct: 266 RLTPWSGEQS 275 >gi|227821372|ref|YP_002825342.1| hypothetical amino acid ABC-transporter ATP-binding protein [Sinorhizobium fredii NGR234] gi|227340371|gb|ACP24589.1| hypothetical amino acid ABC-transporter ATP-binding protein [Sinorhizobium fredii NGR234] Length = 295 Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 97/233 (41%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++ +I ++ + + + +T + V+S+ Sbjct: 61 PIILVLIALIAWFASRNWKVVAGAVGTLLLIGYFDMWDDTMKTISMIFVCTVLSIAVGIP 120 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 + ++S R+ ++ P+LD+MQ++P +L V+ GKV G I+AI Sbjct: 121 LGIIMSRSDRVQNIINPVLDVMQTMPSFVYLIPVVMLLG---IGKVPGLIAVVIYAIP-- 175 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + +D+ E + +F S WQK + +P ++P ++ + ++ Sbjct: 176 ---PMIRLTNLGIRLVDKDVLEAADAFGSSSWQKLKNVQMPLALPTIMAGINQTIMMALA 232 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q ++ L ++G+ ++D++ Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 93/284 (32%), Gaps = 15/284 (5%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLG--VIRFHFPENFLQLCSNQRVSYMLDIFWF 349 T F S + + R G + F P F + + + ++ Sbjct: 5 TKFPHMNDDSLRELKKAIDEGFRTFTRAYGDGIESFFDPLQFFLIEAERFMTRTPWPIIL 64 Query: 350 CVVCGVAIGIA--WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 ++ +A + W+ + V + T+ + V +++ + IP+GI Sbjct: 65 VLIALIAWFASRNWKVVAGAVGTLLLIGYFDMWDDTMKTISMIFVCTVLSIAVGIPLGII 124 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 + + + I P ++ P+ V+ VV + + + ++ ++ Sbjct: 125 MSRSDRVQNIINPVLDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRL 180 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 G D E A +F + W+ + + +P P + G A +++ + Sbjct: 181 TNLGIRLVDKDVLEAADAFGSSSWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMI 240 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 241 G-------VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|310830348|ref|YP_003965448.1| ABC proline/glycine betaine transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753254|gb|ADO44397.1| ABC proline/glycine betaine transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 303 Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++V ++ + G + + I + L + T + +++++ Sbjct: 69 IVVFLVLVGITWGTSRSWKITAGAGVALIGIGWFGLWNDSMITLSMVTVCTLVAVIIGLP 128 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L A+S R ++ P+LD+MQ++P +L VV F GKV G I+A+ Sbjct: 129 IGILTARSDRAQRIITPVLDVMQTMPSFVYLIPVVVIFG---IGKVPGMIAVVIYAMP-- 183 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + R+ E + +F S QK W + +P ++P L+ + ++ Sbjct: 184 ---PMIRLTNLGIRLVDREAIEAADAFGSSERQKLWNVQLPLALPTLMTGVNQTIMMALS 240 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + M+ VG G+G + AI Q ++ + +D+ Sbjct: 241 MVVVASMVGVG-------GLGRNVLQAINNQFFTIGFLNGFALVAIAITFDR 285 Score = 78.8 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 81/275 (29%), Gaps = 11/275 (4%) Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356 + + + V+ + L + + +F V Sbjct: 22 AMRAMRRTIDTGFRDMVRGASSYIDAATAPVQSFLNTLEGLFVNTPWIVVFLVLVGITWG 81 Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 +W+ + IT+ V V ++A II +P+GI Sbjct: 82 TSRSWKITAGAGVALIGIGWFGLWNDSMITLSMVTVCTLVAVIIGLPIGILTARSDRAQR 141 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 I P ++ P+ V+ VV + + + + ++ G Sbjct: 142 IITPVLDVMQTMPSFVYLIPVVVIFGIGKVPGMIAVVIY----AMPPMIRLTNLGIRLVD 197 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 + E A +F + + + LP P +TG A + +V+ + G Sbjct: 198 REAIEAADAFGSSERQKLWNVQLPLALPTLMTGVNQTIMMALSMVVVASMVGVG------ 251 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F L + + +R Sbjct: 252 -GLGRNVLQAINNQFFTIGFLNGFALVAIAITFDR 285 >gi|225414562|ref|ZP_03761751.1| hypothetical protein CLOSTASPAR_05785 [Clostridium asparagiforme DSM 15981] gi|225041918|gb|EEG52164.1| hypothetical protein CLOSTASPAR_05785 [Clostridium asparagiforme DSM 15981] Length = 266 Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 93/245 (37%), Gaps = 25/245 (10%) Query: 346 IFWFCVVCGVAIGIAWQ---------------SIGYIVNHFTYQDVLYVIWLGCITMFRV 390 + W +V V + + WQ + +Y + + ++ RV Sbjct: 16 LLWIAIVFPVLVILLWQFASTHGLVKASLVPAPLTIAKTFLSYIESGKLWKNLSVSFGRV 75 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 +I ++ + G +G +++ +L P P+V+ + Sbjct: 76 ACGYVIGAVCGVVAGFLMGLFKPVNAAFSGIVSVLRPIPTIALVPIVILLAGIGFSSK-- 133 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 ++ FG+ W +L N + G + N EVA ++ I + II+P P +TG Sbjct: 134 --VAIIAFGSFWPVLLNTVHGIQSVDNKLLEVAYTYRIPTLKTIFKIIVPSSIPAILTGL 191 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 AW + + +E+ + +TG+G I S E + + + VL++ L ++ Sbjct: 192 RLGMSNAWMSVVAAEMIA------SSTGIGYLITLSRETANARVMYMCVLVIGVIGLFID 245 Query: 571 RFLWH 575 R L Sbjct: 246 RGLTR 250 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 95/249 (38%), Gaps = 23/249 (9%) Query: 22 LLAFVLVIGIINILLHGIQET---------TVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 LL +V ++ ILL T P I ++ L + S + R+ Sbjct: 16 LLWIAIVFPVLVILLWQFASTHGLVKASLVPAPLTIAKTFLSYIESGKLWKNLSVSFGRV 75 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 VI + V L + + I+ +++ IP + + ++ + K Sbjct: 76 ACGYVIGAVCGVVAGFLMGLFKPVNAAFSGIVSVLRPIPTIALVPIVILLAGIGFSSK-- 133 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 + I W + + + ++ L EV+ ++R+ + + + VP S+P + Sbjct: 134 ------VAIIAFGSFWPVLLNTVHGIQSVDNKLLEVAYTYRIPTLKTIFKIIVPSSIPAI 187 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + + + MS W VVA+EMI GIG I L+ + + + +L + + Sbjct: 188 LTGLRLGMSNAWMSVVAAEMIASST------GIGYLITLSRETANARVMYMCVLVIGVIG 241 Query: 253 FLYDQLLFR 261 D+ L R Sbjct: 242 LFIDRGLTR 250 >gi|120611631|ref|YP_971309.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] gi|120590095|gb|ABM33535.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] Length = 289 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 106/298 (35%), Gaps = 13/298 (4%) Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347 + R T + + R L + P L + ++ Sbjct: 1 MSRVTGAMPADPQPGAPAAPASAAVHAAPRRRLRPLEPVAPRTRWLLGAAFFALFVAVWS 60 Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 + V+ I + + + +T++RV+ ++A+++ +P+GI Sbjct: 61 VATLGGYVSPTFLASPITMVREGWLLFTQFGFLHDIGMTVWRVLGGFVLAALVAVPLGIA 120 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 +G + + ++PF PA+ F PL++ L L++ G+ + I+ Sbjct: 121 MGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGLGELQK----LLVIFIGSVFQIILM 176 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 V D E A + T R +++PG P G AW IV+E+ Sbjct: 177 VAVIVGNARKDLVEAAYTLGATPTGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELI 236 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGT 582 ++G+G I +S + +++ G++++ L + L+ + Sbjct: 237 G------SSSGIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDFLFKALNRRLFAWSA 288 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 18/270 (6%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHS 60 L + P R FV V + + + P +V + Sbjct: 32 RLRPLEPVAPRTRWLLGAAFFALFVAVWSVATLGGYVSPTFLASPITMVREGWLLFTQFG 91 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 T R+L V++ L + + L P + + +P F+ + Sbjct: 92 FLHDIGMTVWRVLGGFVLAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLI 151 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++ EL + IF V+ + + + N +DL E + + + Sbjct: 152 LWAGLG--------ELQKLLVIFIGSVFQIILMVAVIVGNARKDLVEAAYTLGATPTGIV 203 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P + P + + + + W +V+ +E+I GIG I + + Sbjct: 204 RRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQ 257 Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWS 267 I++ ++ + + + D L L R + WS Sbjct: 258 IIFGIIVIGLIGLVSDFLFKALNRRLFAWS 287 >gi|294626068|ref|ZP_06704676.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599604|gb|EFF43733.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 283 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 14/237 (5%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L F + + + L P + L + + LR+L+ I Sbjct: 34 LIFFAGLELASALGWTPSYLLPPPSQILRTLADEANRGLASHVGASVLRVLAGFSIGAGL 93 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + SR L +L P ++++P L ++ +++ E I I Sbjct: 94 GLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGID--------EAPKITLI 145 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + L + R L E+ S+ LS + + +P ++P + + S+S Sbjct: 146 AIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSL 205 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W F+VA+E+I G+G ++ + ++ A++ + + L D LL Sbjct: 206 AWMFLVAAELIA------ATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGLL 256 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 99/261 (37%), Gaps = 14/261 (5%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI----GYIVNHFT 372 R + P+ L+L ++ + IF+ + A+G + I+ Sbjct: 6 LRVSASVAGTPPQPRLRLPASSLGWLLPLIFFAGLELASALGWTPSYLLPPPSQILRTLA 65 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + ++ RV+ I + + + VG+ +G + + P Q L A P+ Sbjct: 66 DEANRGLASHVGASVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLA 125 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + PL++ + L+ G + + V++G E+ S+ ++ R Sbjct: 126 WVPLLLLWMGI----DEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPR 181 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R I+LP P TG T+ AW + +E+ + T GLG +++ E Sbjct: 182 LVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSRP 235 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 V+ ++++ + L Sbjct: 236 DIVIGAIVLLALLGKLSDGLL 256 >gi|241113176|ref|YP_002973011.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861384|gb|ACS59050.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 295 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++ II ++ + + + + + RT + V+S+ Sbjct: 61 PIITAIILVIAWFGSRSLKIVLGCLVTLLLIGYFDMWDDTMRTVSMIFVCTVLSIAIGIP 120 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L A+S RL V+ PILD+MQ++P +L V+ GKV G I+AI Sbjct: 121 MGILMARSDRLQRVINPILDVMQTMPSFVYLIPVVMLLG---IGKVPGLIAVVIYAIP-- 175 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + +D+ E + +F S QK + + +P ++P ++ + ++ Sbjct: 176 ---PMIRLTDLGIRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALA 232 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q ++ L ++G+ ++D++ Sbjct: 233 MVVVASMIGV-------QGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRV 278 Score = 83.8 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 87/280 (31%), Gaps = 18/280 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 N + I F + ++ L L Q + +L I WF Sbjct: 16 RNLKKAIDDGFRAFTRSYGDAIESLFSPLQHFLIAADRFMTQTPWPIITAIILVIAWFGS 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + ++ I + D + T+ + V +++ I IP+GI + Sbjct: 76 RSLKIVLGCLVTLLLIGYFDMWDDTMR-------TVSMIFVCTVLSIAIGIPMGILMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + I P ++ P+ V+ VV + + + ++ ++ G Sbjct: 129 DRLQRVINPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A +F + + + LP P + G A +V+ + Sbjct: 185 IRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALAMVVVASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|302518088|ref|ZP_07270430.1| glycine betaine ABC transport system permease [Streptomyces sp. SPB78] gi|302426983|gb|EFK98798.1| glycine betaine ABC transport system permease [Streptomyces sp. SPB78] Length = 1150 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 18/235 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 +L+ GI+ +L ++ T ++ V L D L + A + ++ A VI+L+ Sbjct: 49 LLLAGILAVLAFWLRGLTA--GVLSFVGFALIDSLELWEPAMNSFALVIVATVIALVIGV 106 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 A+S+R V+ P+LD Q++P + +L + +F P A I A Sbjct: 107 PLGIWTARSQRASAVVRPLLDFTQTMPAMVYLIPAIFFFGLGVP--------AGIVATII 158 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +L E + +F + + + +P ++P ++ + + Sbjct: 159 FGFAPAVRMTELGIRQVDEELVEAADAFGTTPRKTLLGVQLPLALPTIMAGVNQVIMLNL 218 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 VV + M+ G + AI D+ A ++++ + D+++ Sbjct: 219 SMVVIAGMVGAGGLGGS-------VYQAIGNVDIGLGSEAGVSIVVLAIFLDRVV 266 Score = 86.9 bits (214), Expect = 9e-15, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 75/229 (32%), Gaps = 13/229 (5%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + V +++ + D L + + V+V +IA +I +P+ Sbjct: 49 LLLAGILAVLAFWLRGLTAGVLSFVGFALIDSLELWEPAMNSFALVIVATVIALVIGVPL 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW S+ ++P PA V+ + + ++ L + +IFG Sbjct: 109 GIWTARSQRASAVVRPLLDFTQTMPAMVYL---IPAIFFFGLGVPAGIVATIIFG-FAPA 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F T + + LP P + G + +++ Sbjct: 165 VRMTELGIRQVDEELVEAADAFGTTPRKTLLGVQLPLALPTIMAGVNQVIMLNLSMVVIA 224 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + G + + ++ + + + L+R + Sbjct: 225 GMVGAGGLGGS-------VYQAIGNVDIGLGSEAGVSIVVLAIFLDRVV 266 >gi|302873274|ref|YP_003841907.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|307688559|ref|ZP_07631005.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|302576131|gb|ADL50143.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] Length = 253 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 10/197 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I+++R V IA+I I +G+ G+ I P Q+L +FP +V Sbjct: 54 LFKYIGISLYRFAVGYFIAAIFAIALGLIFGWYKKAWDIIDPIVQVLRPVSPIAWFPFIV 113 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 NL +++ + IL + + + +VAS+F I G + I+ Sbjct: 114 IIFGIG----NLPAIVIIFIAAFFPILLSTVTAVKNIEKSYLKVASNFEIKGLKLMGKIV 169 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP IFPY A G AW + E+ +GLG I ++ ++ G Sbjct: 170 LPAIFPYIANAMHIALGSAWVFLVAGEMVG------AQSGLGYLIIDARNNLRLDMLMAG 223 Query: 559 VLIMCCFVLALNRFLWH 575 ++ + L L++ + Sbjct: 224 IIFIGLIGLILDKLIAR 240 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 92/224 (41%), Gaps = 14/224 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G P ++V + ++ L +Y + R I+ +F + ++ Sbjct: 31 GKTSIPSPLEVVKAIKDMIEDKILFKYIGISLYRFAVGYFIAAIFAIALGLIFGWYKKAW 90 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 ++ PI+ +++ + + + F V+ F L AI IF + + + S + Sbjct: 91 DIIDPIVQVLRPVSPIAWFPFIVIIFGIG--------NLPAIVIIFIAAFFPILLSTVTA 142 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + NI + +V+ +F + G + + +P P + M +++ W F+VA EM+ Sbjct: 143 VKNIEKSYLKVASNFEIKGLKLMGKIVLPAIFPYIANAMHIALGSAWVFLVAGEMVG--- 199 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G I A L ++ ++ + + + D+L+ R Sbjct: 200 ---AQSGLGYLIIDARNNLRLDMLMAGIIFIGLIGLILDKLIAR 240 >gi|260555329|ref|ZP_05827550.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] gi|260411871|gb|EEX05168.1| nitrate ABC transporter, permease [Acinetobacter baumannii ATCC 19606] Length = 289 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 95 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + Y+ILP Sbjct: 155 GETTK----VLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQVFWYVILPTAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + +E+ + G+G + + + V+LG++++ Sbjct: 211 PHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFIVQSAAQFLITDTVILGIIVIA 264 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 265 IVAVSFELFL 274 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 88 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 148 LVIWFGIG--------ETTKVLLIFFSILAPVIISSAHGVLSHQLNRERAALSLGASQSQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FWY+ +P ++P ++ + + + GW +VA+E++ GIG + A + Sbjct: 200 VFWYVILPTALPHIITGIRIGLGVGWSTLVAAELVA------ADRGIGFIVQSAAQFLIT 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 254 DTVILGIIVIAIVAVSFELFL 274 >gi|209546966|ref|YP_002278884.1| amino acid ABC transporter permease [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538210|gb|ACI58144.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 295 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 + RT + ++S+ L A+S RL V+ PILD+MQ++P +L V Sbjct: 96 MWDDTMRTVSMIFVCTILSIAIGIPMGILMARSDRLQRVINPILDVMQTMPSFVYLIPVV 155 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + GKV G I+AI M + + +D+ E + +F S QK Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTDLGIRLVDKDVLEAADAFGTSRSQKL 207 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P ++ + ++ VV + MI V G+G + AI Q Sbjct: 208 FKVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260 Query: 241 ILYAMLTMLGVIFLYDQL 258 ++ L ++G+ ++D++ Sbjct: 261 GIFNGLAIVGIAIIFDRV 278 Score = 83.4 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 86/280 (30%), Gaps = 18/280 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 N + I F + ++ L L Q +L I WF Sbjct: 16 RNLKKAIDDGFRGFTRAYGDGIETLFVPLQHFLIAAERFMTQTPWPIITLIVLAIAWFAS 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + ++ I + D + T+ + V I++ I IP+GI + Sbjct: 76 RSLKIVFGCLVTLMLIGYFDMWDDTMR-------TVSMIFVCTILSIAIGIPMGILMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + I P ++ P+ V+ VV + + + ++ ++ G Sbjct: 129 DRLQRVINPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A +F + + + LP P + G A +++ + Sbjct: 185 IRLVDKDVLEAADAFGTSRSQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|281492007|ref|YP_003353987.1| glycine betaine/carnitine/choline ABC transporter permease/substrate-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281375716|gb|ADA65220.1| Glycine betaine/carnitine/choline ABC transporter, permease and substrate-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 573 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 16/235 (6%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFT 83 F L+I ++ IL + + + + ++L L T +L + ++S++ Sbjct: 53 FWLMIAVVTILAILVSGKKIAFPLFTFIGLSLIANQGLWSDLMSTITLVLLSSLLSIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS + ++ PILD MQ++P +L V +F G V G + IFA Sbjct: 113 VPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA-- 167 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +L E + SF + QK + L P + ++ + ++ Sbjct: 168 ---LPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ D+ + ++++ + + D+ Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 16/231 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIW 401 FW + + I FT+ + + G T+ V++ +++ II Sbjct: 53 FWLMIAVVTILAILVSGKKIAFPLFTFIGLSLIANQGLWSDLMSTITLVLLSSLLSIIIG 112 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+GIW+ ++ +QP + P V+ V+ + + Sbjct: 113 VPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----AL 168 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + G + E A SF T + + P + G A + Sbjct: 169 PPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMV 228 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + + + + + + + + ++RF Sbjct: 229 VIASMIG-------APGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272 >gi|167854721|ref|ZP_02477500.1| ABC transporter, permease protein [Haemophilus parasuis 29755] gi|167854135|gb|EDS25370.1| ABC transporter, permease protein [Haemophilus parasuis 29755] Length = 245 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 94/234 (40%), Gaps = 14/234 (5%) Query: 344 LDIFWFCVVCGVA----IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 L +FW +A I + + + + + ++ R++V + +A + Sbjct: 15 LVLFWQAGTLLLAQHIQIATDLSPLQTLNSLYALSISGEIFPHIWASVQRIIVGLTVALL 74 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 IP+G+ +G + P Q L + P+VV + L + L+ F Sbjct: 75 CGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLEVGDL----PVYFLIAFA 130 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 W ++ + +G + + ++ S + +II+P I + +TG + G AW Sbjct: 131 AIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPAITGHILTGLRVSLGIAWV 190 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + E+ GLG +I ++ ++ ++ E++ V+++ L+ L Sbjct: 191 VLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAVIVIGLIGWGLDSLL 238 Score = 103 bits (257), Expect = 9e-20, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 93/252 (36%), Gaps = 17/252 (6%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASR 67 + R L++ VL +LL + P ++ + + + Sbjct: 1 MKRNYLYGFTGLISLVLFWQAGTLLLAQHIQIATDLSPLQTLNSLYALSISGEIFPHIWA 60 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R++ + ++LL S+ L M P ++ I L ++ V++ Sbjct: 61 SVQRIIVGLTVALLCGIPLGLALGLSKTLEMCCTPAFQFLRMISPLSWMPIVVMFLEVG- 119 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 +L F I + +W++ S + +I +SRS S + ++ VP Sbjct: 120 -------DLPVYFLIAFAAIWSLILSTASGVKSIDPQWFLLSRSLAASKRETLCHIIVPA 172 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++ + +S+ W +V EM+ V + G+G +I ++ A++ Sbjct: 173 ITGHILTGLRVSLGIAWVVLVPCEMLGVNE------GLGYFILDTRDRLAYSELMAAVIV 226 Query: 248 MLGVIFLYDQLL 259 + + + D LL Sbjct: 227 IGLIGWGLDSLL 238 >gi|126665912|ref|ZP_01736893.1| glycine betaine/L-proline transport system permease [Marinobacter sp. ELB17] gi|126629846|gb|EBA00463.1| glycine betaine/L-proline transport system permease [Marinobacter sp. ELB17] Length = 686 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 89/549 (16%), Positives = 179/549 (32%), Gaps = 61/549 (11%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A +T +L A+ +S+L +A +++ VL P+L++ Q++P +L VV+F Sbjct: 169 AMQTLSFVLVAVPLSVLLGLTLGIIAFRNKTFEAVLAPLLNVAQTMPHFSYLIPVVVFFG 228 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G GA IFA M L + ++ E + Q + + Sbjct: 229 ---IGDHAGAISTVIFATP-----PMIRLTILGLKKVSPEVVEAGMMSGCNSRQLMFKVL 280 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + ++ + ++ + V + I G+G + +++ + L Sbjct: 281 IPTARHDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGYDLLVSLNMLKIGQALEL 333 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK-FRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSW 303 ++++ + + D+L + W+ K + + L F + Y + Sbjct: 334 GISIVLIAVVLDRLS----LAWAKKQVDYFADVPFHLRHKYSLAFVGILIFTSIVAYIAS 389 Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC---------- 353 F +N + + G+ F ++ + + +F + Sbjct: 390 MAFPDKANYFYFIHESQGLTTEKFWDSIVDWIITNTYDSVQSFNFFMITSILMPMKEAYL 449 Query: 354 ---GVAIGIAWQSIGYIVNHFTYQDVLYVIWL----------GCITMFRVVVLIIIASII 400 A GYIV V IT + +II+ I Sbjct: 450 SMPVAATLFLVAGTGYIVGGLRSAIVATAFIAFIALTPWWDRALITAYMTTFAVIISVTI 509 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 VGI P + + FP+ V+ V+ L+ + + + Sbjct: 510 GCSVGILCSRSPKATKFMLLVCDTFQTFPSFVYLIPVIMLFGVSDLSVLIAVIVYATIPA 569 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 Y + G S P +E S + + I LP FP+ + G + Sbjct: 570 TRY----TVEGLSNVPKSLQEAGSMSGVNRTQRLLKIELPLAFPHIMLGINQTVVFSLFM 625 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAEST--EKGSFPEVVLGVLIMCCFVLALNRFLWHPLY 578 I+ LG I +S G +VLG+ + LA++ + Sbjct: 626 IIIGAFIGTDD-------LGQLIMQSLSEANGMGQGIVLGLCV-AFIGLAVDHLI----N 673 Query: 579 LYGTRCLRL 587 + + R+ Sbjct: 674 TWAEQRKRV 682 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 18/207 (8%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I L A T A++IS+ L ++S + ++ + D Q+ P Sbjct: 483 IALTPW--WDRALITAYMTTFAVIISVTIGCSVGILCSRSPKATKFMLLVCDTFQTFPSF 540 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L ++ F ++L+ + A+ T + L N+P+ L+E Sbjct: 541 VYLIPVIMLFGV--------SDLSVLIAVIVYATIPATRYTVEGLSNVPKSLQEAGSMSG 592 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 ++ Q+ + +P + P ++ + ++ F ++ I D +G I ++ Sbjct: 593 VNRTQRLLKIELPLAFPHIMLGINQTVVFSLFMIIIGAFIGTDD-------LGQLIMQSL 645 Query: 234 KEQD-LLAILYAMLTMLGVIFLYDQLL 259 E + + + L + + D L+ Sbjct: 646 SEANGMGQGIVLGLCVAFIGLAVDHLI 672 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 23/237 (9%), Positives = 66/237 (27%), Gaps = 19/237 (8%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 VA G + + + I++ + + + ++ +P Sbjct: 122 WARIPALPWPAVAAGAFLAGQYLGGRNLSLLAGISTIYIAVFGQWTPAMQTLSFVLVAVP 181 Query: 404 VGIWIGF--------RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 + + +G + + P + P + + V ++ + + Sbjct: 182 LSVLLGLTLGIIAFRNKTFEAVLAPLLNVAQTMPHFSYL---IPVVVFFGIGDHAGAIST 238 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 +IF T ++ I G + E + +++P + G Sbjct: 239 VIFAT-PPMIRLTILGLKKVSPEVVEAGMMSGCNSRQLMFKVLIPTARHDILIGVNQVIM 297 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++++ GLG + S + + + + + L+R Sbjct: 298 QCLAMAVIASFIG-------AKGLGYDLLVSLNMLKIGQALELGISIVLIAVVLDRL 347 >gi|15673433|ref|NP_267607.1| betaine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|7188801|gb|AAF37879.1|AF234619_2 OpuABC [Lactococcus lactis] gi|12724442|gb|AAK05549.1|AE006375_3 betaine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|326406928|gb|ADZ63999.1| glycine betaine/carnitine/choline ABC transporter, permease and substrate-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 573 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 16/235 (6%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFT 83 F L+I ++ IL + + + + ++L L T +L + ++S++ Sbjct: 53 FWLMIAVVTILAILVSGKKIAFPLFTFIGLSLIANQGLWSDLMSTITLVLLSSLLSIIIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AKS + ++ PILD MQ++P +L V +F G V G + IFA Sbjct: 113 VPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA-- 167 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +L E + SF + QK + L P + ++ + ++ Sbjct: 168 ---LPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ D+ + ++++ + + D+ Sbjct: 225 LSMVVIASMI-------GAPGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 16/231 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIW 401 FW + + I FT+ + + G T+ V++ +++ II Sbjct: 53 FWLMIAVVTILAILVSGKKIAFPLFTFIGLSLIANQGLWSDLMSTITLVLLSSLLSIIIG 112 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+GIW+ ++ +QP + P V+ V+ + + Sbjct: 113 VPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----AL 168 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + G + E A SF T + + P + G A + Sbjct: 169 PPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMV 228 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + + + + + + + + ++RF Sbjct: 229 VIASMIG-------APGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272 >gi|271501794|ref|YP_003334820.1| binding-protein-dependent transporter inner membrane component [Dickeya dadantii Ech586] gi|270345349|gb|ACZ78114.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech586] Length = 400 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 23/242 (9%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 P +L F L+ I G+ I I + A T +L+A+ Sbjct: 148 PAPIAILVFSLLAWQIASFGMGVATLLSLIAIGAIGAWS--------QAMVTLALVLTAL 199 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 ++ A S R ++ P+LD MQ+ P +L V+ F G V G + Sbjct: 200 FFCIIIGLPLGIWLANSNRAVRIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVV 256 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 IFA + + + +P DL E ++SF S Q + + +P +MP ++ + Sbjct: 257 TIIFA-----LPPIVRLTLLGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGI 311 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 ++ VV + MI VG G+G + I D+ + ++ + + D Sbjct: 312 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILD 364 Query: 257 QL 258 +L Sbjct: 365 RL 366 Score = 92.7 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 85/235 (36%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L + V +AWQ + + T ++ + +G +T+ V+ + Sbjct: 143 LLTSVPAPIAILVFSLLAWQIASFGMGVATLLSLIAIGAIGAWSQAMVTLALVLTALFFC 202 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 II +P+GIW+ ++P + PA V+ +V N+ ++ I Sbjct: 203 IIIGLPLGIWLANSNRAVRIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 258 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ + G P D E A SF + + + LP P + G A Sbjct: 259 IFALPPIVRLTLLGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 318 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 319 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 366 >gi|331699980|ref|YP_004336219.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326954669|gb|AEA28366.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 270 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 10/192 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++R++V ++IA ++ + G+ IG + + +P Q L + P+ + Sbjct: 81 SLWRLLVGLLIAVVLGVVTGLAIGTWQSLETASRPVFQFLRMVSPLSWAPVAIGLFGIGD 140 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L+ W I+ N AG + F A S T ++LP I P+ Sbjct: 141 R----PVFFLVAAAAVWPIVLNTAAGVRSIDQGFLLAARSLGATPAETLTSVVLPAIRPH 196 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 +TG A G W + +E+ T+GLG I S ++ ++ +V+ +L++ Sbjct: 197 VLTGLRLALGIGWVVLVPAEMLG------VTSGLGYEILNSRDQLAYDKVMAVILVIGLL 250 Query: 566 VLALNRFLWHPL 577 L+ L Sbjct: 251 GSLLDALARRAL 262 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 81/225 (36%), Gaps = 14/225 (6%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 + + P+ + + L + R+L ++I+++ V + L Sbjct: 52 MLQDFAPQHAIPAIGALAAQGVLFPDIWTSLWRLLVGLLIAVVLGVVTGLAIGTWQSLET 111 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 P+ ++ + L + + F F + + VW + + + Sbjct: 112 ASRPVFQFLRMVSPLSWAPVAIGLFGIGDRP--------VFFLVAAAAVWPIVLNTAAGV 163 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +I + +RS + + + +P P ++ + +++ GW +V +EM+ V Sbjct: 164 RSIDQGFLLAARSLGATPAETLTSVVLPAIRPHVLTGLRLALGIGWVVLVPAEMLGV--- 220 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 G+G I + + ++ +L + + L D L R + Sbjct: 221 ---TSGLGYEILNSRDQLAYDKVMAVILVIGLLGSLLDALARRAL 262 >gi|49083481|gb|AAT51045.1| PA3936 [synthetic construct] Length = 273 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 21/244 (8%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382 P +R + + ++ A W + ++ + L +W Sbjct: 13 PVPRKRRLPGDRRRWAAGASVLALALLWWAATRFGWVDVLFLPAPEQLFEALQRLWQEGY 72 Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ + A + IP+G+ +G P + + P + P + Sbjct: 73 LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 132 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V L+ LL+ +L AG + + W+ Sbjct: 133 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 188 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 RY+ILP P +TG A G W+ + +E+ + GLG + + + + Sbjct: 189 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 242 Query: 555 VVLG 558 VV+G Sbjct: 243 VVVG 246 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 75 ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 134 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F EL+ + I+ + + + + + R + R S WQ Sbjct: 135 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 186 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 Y+ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 187 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 240 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + ++ + + R W Sbjct: 241 DVVVVGILLIAAIALAFELGLRWVQRRFAAW 271 >gi|75674654|ref|YP_317075.1| binding-protein dependent transport system inner membrane protein [Nitrobacter winogradskyi Nb-255] gi|74419524|gb|ABA03723.1| Binding-protein-dependent transport systems inner membrane component [Nitrobacter winogradskyi Nb-255] Length = 285 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 86/200 (43%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 T ++ +++ RV++ + +A +I +PVG+ +G +++ P Q L Sbjct: 80 VTMLGQPDLLVHVLVSLRRVLIGLALALLIGVPVGLAVGSYSRLNTATSPAFQFLRMISP 139 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + P+ V + + ++ F W I+ N G + +A S T Sbjct: 140 LSWMPIAVMVFGVG----DQPIYFMLAFAAVWPIMLNTAEGVRRLQPSWLSLADSLAATR 195 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W Y+ILPG+ + +TG A G W + E+ + GLG +I ++ ++ Sbjct: 196 WETLCYVILPGVLGHVLTGLRLAVGIVWIVLVPCEMLG------VSAGLGYFILDTRDRL 249 Query: 551 SFPEVVLGVLIMCCFVLALN 570 ++ E++ VL++ L+ Sbjct: 250 AYSELMATVLMIGVLGFLLD 269 Score = 95.8 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 77/220 (35%), Gaps = 14/220 (6%) Query: 37 HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRL 96 G P + + L L + + R+L + ++LL RL Sbjct: 64 QGFIRQFSPTTAIPELVTMLGQPDLLVHVLVSLRRVLIGLALALLIGVPVGLAVGSYSRL 123 Query: 97 GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQ 156 P ++ I L ++ V+ F + F + + VW + + + Sbjct: 124 NTATSPAFQFLRMISPLSWMPIAVMVFGVG--------DQPIYFMLAFAAVWPIMLNTAE 175 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + + ++ S + W+ Y+ +P + ++ + +++ W +V EM+ V Sbjct: 176 GVRRLQPSWLSLADSLAATRWETLCYVILPGVLGHVLTGLRLAVGIVWIVLVPCEMLGVS 235 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 G+G +I ++ +L + + FL D Sbjct: 236 A------GLGYFILDTRDRLAYSELMATVLMIGVLGFLLD 269 >gi|238022879|ref|ZP_04603305.1| hypothetical protein GCWU000324_02800 [Kingella oralis ATCC 51147] gi|237865687|gb|EEP66825.1| hypothetical protein GCWU000324_02800 [Kingella oralis ATCC 51147] Length = 249 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV V ++ IP+G +G P Q L + P+ V Sbjct: 60 GASLQRVAVGLMGTLAAGIPIGFALGLSRRAEEAAGPAFQFLRMVSPLSWMPVAVMLFGI 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 N + L+ F W I+ N +G + E+ S T I+LP + Sbjct: 120 G----NAPIYFLLAFAAVWPIILNTASGVRNINPQWLELGRSLSATRAEMLFKIMLPAVL 175 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G +W + E+ GLG +I ++ ++ ++ E++ ++++ Sbjct: 176 SDILNGLRLAIGISWVVLVPCEMLG------VNEGLGYFILDTRDRLAYSELMAAIVLIG 229 Query: 564 CFVLALN 570 L+ Sbjct: 230 IIGWLLD 236 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 81/229 (35%), Gaps = 14/229 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + +I + P + + L +L + + R+ ++ +L Sbjct: 22 IGSLILAQSMPLANMLTPAAALGSLAHLLPEAALWAHIGASLQRVAVGLMGTLAAGIPIG 81 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 SRR P ++ + L ++ V+ F F + + V Sbjct: 82 FALGLSRRAEEAAGPAFQFLRMVSPLSWMPVAVMLFGIG--------NAPIYFLLAFAAV 133 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + + + NI E+ RS + + + + +P + ++ + +++ W + Sbjct: 134 WPIILNTASGVRNINPQWLELGRSLSATRAEMLFKIMLPAVLSDILNGLRLAIGISWVVL 193 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 V EM+ V + G+G +I ++ A++ + + +L D Sbjct: 194 VPCEMLGVNE------GLGYFILDTRDRLAYSELMAAIVLIGIIGWLLD 236 >gi|76781920|gb|ABA54729.1| AbsT2 [Alcaligenes sp. O-1] Length = 244 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 70/197 (35%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + +M RVV IA ++ + +G+ + I PF + L FPL Sbjct: 42 FELFGALYASMKRVVSGFAIAVVVGVSIGVLMASSRIAEDVIDPFVEFLRPISPLALFPL 101 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + L+ + +L + AG ASS + W R Sbjct: 102 AILWFGIGDASK----IFLIALSCCFPVLLSTYAGVQGIDVALVRAASSLGASRWEIVRN 157 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILPG P +TG + G A I SE+ G+G + ++ + + Sbjct: 158 VILPGSIPSILTGVRISWGIALIVIIASEMVG------AVNGIGFMVLDAQQTFRTERLF 211 Query: 557 LGVLIMCCFVLALNRFL 573 G+ I+ +R L Sbjct: 212 SGIAIIAAIGYGTDRAL 228 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 17/216 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + R++S I+++ L A SR V+ P ++ ++ I L Sbjct: 43 ELFGALYASMKRVVSGFAIAVVVGVSIGVLMASSRIAEDVIDPFVEFLRPISPLALFPLA 102 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F + + IF I S + + S Y + I L + S S W+ Sbjct: 103 ILWFGIG--------DASKIFLIALSCCFPVLLSTYAGVQGIDVALVRAASSLGASRWEI 154 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P S+P ++ + +S ++ASEM+ + GIG + A + Sbjct: 155 VRNVILPGSIPSILTGVRISWGIALIVIIASEMVG------AVNGIGFMVLDAQQTFRTE 208 Query: 240 AILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRL 272 + + + + + D+ L R ++ W ++R+ Sbjct: 209 RLFSGIAIIAAIGYGTDRALRWLRRSLVPWHQEYRV 244 >gi|312865610|ref|ZP_07725835.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus downei F0415] gi|311098878|gb|EFQ57097.1| ABC transporter, substrate-binding protein, QAT family [Streptococcus downei F0415] Length = 575 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 19/237 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + +L++ + ++ T + I + + L T +L + +IS+L Sbjct: 57 WILMLLIVALAYLISKKWSFTI----LTAIGLLYIYNQELWGDLINTFTLVLLSSLISIL 112 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 AK+ V+ PILD MQ++P +L V +F G V G + IFA Sbjct: 113 IGIPLGIWMAKNETAKKVINPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFA 169 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + IP +L E S +F + QK + + +P + ++ + ++ Sbjct: 170 -----LPPTVRMTNLGIREIPTELVEASDAFGSTSQQKLFGVELPLAKNTIMAGINQTIM 224 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G+ + A++ ++ L ++ + + D+ Sbjct: 225 LSLSMVVTASMI-------GAPGLGNGVLSALQHAEIGNGFVNGLALVILAIIIDRF 274 Score = 80.7 bits (198), Expect = 6e-13, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 11/229 (4%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 + V I W Y + T V++ +I+ +I IP Sbjct: 57 WILMLLIVALAYLISKKWSFTILTAIGLLYIYNQELWGDLINTFTLVLLSSLISILIGIP 116 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +GIW+ I P + PA V+ V+ + + Sbjct: 117 LGIWMAKNETAKKVINPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALPP 172 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + G P + E + +F T + + LP + G + + + Sbjct: 173 TVRMTNLGIREIPTELVEASDAFGSTSQQKLFGVELPLAKNTIMAGINQTIMLSLSMVVT 232 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + ++RF Sbjct: 233 ASMIG-------APGLGNGVLSALQHAEIGNGFVNGLALVILAIIIDRF 274 >gi|297584982|ref|YP_003700762.1| binding-protein-dependent transporter inner membrane component [Bacillus selenitireducens MLS10] gi|297143439|gb|ADI00197.1| binding-protein-dependent transport systems inner membrane component [Bacillus selenitireducens MLS10] Length = 254 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++FR + A +I IP+G+ +G + + P Q+L + P +V Sbjct: 60 ISLFRFFAGYLSAVLIAIPLGLLLGRSNVMWRIVDPVVQVLRPVAPVAWSPFIVLWFGIG 119 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 N+ +++ + +L + ++ + ++A + I II P FP Sbjct: 120 ----NMPAIVIIFIAAFFPVLLSTVSAVKKVDRTYLKLAENLEIGKVSLLVKIIFPAAFP 175 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y G A G AW + E+ +GLG I ++ V+ G++ + Sbjct: 176 YIANGLHIAVGTAWIFLVAGEMIG------AQSGLGYLIVDARNALDLDLVLAGIITIGV 229 Query: 565 FVLALNRFL 573 L L++ + Sbjct: 230 LGLLLDKAV 238 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 89/218 (40%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + + + ++ + S + R + + ++L L +S + ++ Sbjct: 35 LPSPLVVGEGLVSLIRSGAMADHVSISLFRFFAGYLSAVLIAIPLGLLLGRSNVMWRIVD 94 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P++ +++ + + + F V++F + AI IF + + + S ++ + Sbjct: 95 PVVQVLRPVAPVAWSPFIVLWFGIG--------NMPAIVIIFIAAFFPVLLSTVSAVKKV 146 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 R +++ + + + P + P + + +++ W F+VA EMI Sbjct: 147 DRTYLKLAENLEIGKVSLLVKIIFPAAFPYIANGLHIAVGTAWIFLVAGEMIG------A 200 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I A DL +L ++T+ + L D+ + Sbjct: 201 QSGLGYLIVDARNALDLDLVLAGIITIGVLGLLLDKAV 238 >gi|148653178|ref|YP_001280271.1| glycine betaine ABC transporter substrate-binding protein [Psychrobacter sp. PRwf-1] gi|148572262|gb|ABQ94321.1| Substrate-binding region of ABC-type glycine betaine transport system [Psychrobacter sp. PRwf-1] Length = 652 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 98/232 (42%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L+IG++ +L + + L +T ++ +++++++ Sbjct: 411 LIIGLVALLGWLATRKIWFAVSCALGLFLIGAFGLWPALVQTMALLIVSVIVTMVVGIPM 470 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L A S L V+ P+LD+MQ++P +L ++ F ++ A+FA Sbjct: 471 GILMAGSSSLRKVVTPVLDVMQTMPSFVYLIPVLMLFGIG--------KVPALFATIIYA 522 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + +P ++ E RSF + Q ++ +P ++P ++ + ++ Sbjct: 523 LPPLIRLTMLGIKQVPHEMIEAGRSFGSNHKQLLIWIKLPQALPSIMAGINQAVMMSLSM 582 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + +I+ ++ L A ++ + + D++ Sbjct: 583 VVLASMI-------GAPGLGEDVLQSIQTLNIGQGLQAGTAIVIMAIIIDRI 627 Score = 91.9 bits (227), Expect = 3e-16, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 107/288 (37%), Gaps = 18/288 (6%) Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350 T+ F G+ W+F + L+N++ + + G + F + + ++ + Sbjct: 352 NTSAAAFSGFPEWSFENQLNNSLSYVVQNFGTV-FRSISHGTLTYLLLPIEKLMHLTPPW 410 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPV 404 ++ G+ + W + I + L++I + TM ++V +I+ ++ IP+ Sbjct: 411 LIIGLVALLGWLATRKIWFAVSCALGLFLIGAFGLWPALVQTMALLIVSVIVTMVVGIPM 470 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GI + + + P ++ P+ V+ V+ + I + Sbjct: 471 GILMAGSSSLRKVVTPVLDVMQTMPSFVYLIPVLMLFGIG----KVPALFATIIYALPPL 526 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + + G P++ E SF + +I LP P + G A + + +++ Sbjct: 527 IRLTMLGIKQVPHEMIEAGRSFGSNHKQLLIWIKLPQALPSIMAGINQAVMMSLSMVVLA 586 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + GLG + +S + + + + + + ++R Sbjct: 587 SMIG-------APGLGEDVLQSIQTLNIGQGLQAGTAIVIMAIIIDRI 627 >gi|313109371|ref|ZP_07795334.1| putative permease of ABC taurine transporter [Pseudomonas aeruginosa 39016] gi|310881836|gb|EFQ40430.1| putative permease of ABC taurine transporter [Pseudomonas aeruginosa 39016] Length = 272 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 21/244 (8%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382 P +R + + ++ A W + ++ + L +W Sbjct: 13 PVPRKRRLPGDRRRWAAGASVLALALLWWAATRFGWVDVLFLPAPEQLFEALQRLWQEGY 72 Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ + A + IP+G+ +G P + + P + P + Sbjct: 73 LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 132 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V L+ LL+ +L AG + + W+ Sbjct: 133 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 188 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 RY+ILP P +TG A G W+ + +E+ + GLG + + + + Sbjct: 189 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 242 Query: 555 VVLG 558 VV+G Sbjct: 243 VVVG 246 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 75 ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 134 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F EL+ + I+ + + + + + R + R S WQ Sbjct: 135 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 186 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 Y+ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 187 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 240 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + ++ + + R W Sbjct: 241 DVVVVGILLIAAIALAFELGLRWVQRRFAAW 271 >gi|255516844|ref|ZP_05384520.1| putative aliphatic sulfonate ABC transporter,permease protein [Clostridium difficile QCD-97b34] Length = 229 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 84/197 (42%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + ++ R+++ +I+S++ IP+G+ G + +P + + + P P+ Sbjct: 26 GSIFLNVYASVRRILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPM 85 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ + +++I + + I N + G N EV SF+++ R + Sbjct: 86 LILWFGIGEESK----IIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNLSKKRIFYK 141 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 II+P V G G ++ A I +E+ + ++GLG I++ + V+ Sbjct: 142 IIIPNSMLDIVVGLSLGLGYSFRAIIGAELIA------ASSGLGYLISDGKDMSRTDVVL 195 Query: 557 LGVLIMCCFVLALNRFL 573 +G+ ++ + + Sbjct: 196 VGIFVIGFLGILSDYLF 212 Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 14/201 (6%) Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R+L +IS L + ++++ P+ + M+S P L + +++F Sbjct: 34 ASVRRILIGFLISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIG 93 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 K+I LA+ F IF + + + N L EV +SF LS + F+ + +P Sbjct: 94 EESKIIIIILASFFPIF--------LNTLKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIP 145 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 SM +V + + + + ++ +E+I G+G I+ +L + Sbjct: 146 NSMLDIVVGLSLGLGYSFRAIIGAELIAASS------GLGYLISDGKDMSRTDVVLVGIF 199 Query: 247 TMLGVIFLYDQLLFRPMIVWS 267 + + L D L + + +S Sbjct: 200 VIGFLGILSDYLFSKIITKFS 220 >gi|294665704|ref|ZP_06730979.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604546|gb|EFF47922.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 283 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 14/237 (5%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L F + + + L P + L + + LR+L+ I Sbjct: 34 LIFFAGLELASALGWTPSYLLPPPSQILRTLADEANRGLASHVGASVLRVLAGFSIGAGL 93 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + SR L +L P ++++P L ++ +++ E I I Sbjct: 94 GLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGID--------EAPKITLI 145 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + L + R L E+ S+ LS + + +P ++P + + S+S Sbjct: 146 AIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSL 205 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W F+VA+E+I G+G ++ + ++ A++ + + L D LL Sbjct: 206 AWMFLVAAELIA------ATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGLL 256 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 99/261 (37%), Gaps = 14/261 (5%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI----GYIVNHFT 372 R + P+ L+L ++ + IF+ + A+G + I+ Sbjct: 6 LRVSASVAGTPPQPRLRLPASSLGWLLPLIFFAGLELASALGWTPSYLLPPPSQILRTLA 65 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + ++ RV+ I + + + VG+ +G + + P Q L A P+ Sbjct: 66 DEANRGLASHVGASVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLA 125 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + PL++ + L+ G + + V++G E+ S+ ++ R Sbjct: 126 WVPLLLLWMGI----DEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPR 181 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R I+LP P TG T+ AW + +E+ + T GLG +++ E Sbjct: 182 LVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSRP 235 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 V+ ++++ + L Sbjct: 236 DIVIGAIVLLALLGKLSDGLL 256 >gi|255262229|ref|ZP_05341571.1| glycine betaine/proline ABC transporter, permease protein [Thalassiobium sp. R2A62] gi|255104564|gb|EET47238.1| glycine betaine/proline ABC transporter, permease protein [Thalassiobium sp. R2A62] Length = 657 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 75/527 (14%), Positives = 168/527 (31%), Gaps = 41/527 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + A T ++ A ++ + + A KS V+ P+L ++Q++P +L V+ Sbjct: 143 WKIAMETMSVLVVAAPLAFVIGLLLGIAAWKSPAFNRVIKPVLSVLQTLPFFTYLLPAVI 202 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F G GA ++AI M L + ++ E + S WQ Sbjct: 203 FFKV---GPTAGAVATIVYAIP-----PMILMTTLGLQRVSPEVIEAGKMSGCSRWQMLR 254 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 ++ VP + ++ + ++ +VV I +PG+G+ + + L Sbjct: 255 HVYVPAARTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRS 307 Query: 242 LYAMLTMLGVIFLYDQLL----------FRPMIVWSNKFRLERTTGIYPADSWVLYLFRK 291 +T++ + D+L F W + + +L +F + Sbjct: 308 FEIGVTIVLLAVTLDRLSKAWVVKLPEHFERGTPWWVRHKYLVLGLAAFVGFTILAIFVE 367 Query: 292 -----TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346 + + + + G IR+ L + +S Sbjct: 368 WFGEIGRKQTWSKGKEMDTAIKTFLALDGVQAVTGSIRYVLNVWVLNPFRDFLLSIPTSA 427 Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 F +V + ++ F IT++ V+ + IA ++ +P+G+ Sbjct: 428 FIMFIVAFALAMASKKAAVLAAVFFGLVAFSGWWDRSVITLYSVLSAVAIAILLGLPIGV 487 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 + S ++ FP+ ++ + + + + + + Y Sbjct: 488 FAARSERWSRRVLLACDTAQTFPSFIYLIPAIMLFGITATSVVMSILIFAMVPLVRY--- 544 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 + G P + E A T + + LP P G A A+ I++ Sbjct: 545 -TVEGLRNVPPEMTEAADMSGATKMQKLVNVQLPLALPTMAVGFNQAIMFAFFMVIIAAF 603 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 LG + + + + + + L + + Sbjct: 604 IGTQD-------LGQELQRTLAGTDLGKNFVLGICVSLMALTCDMVI 643 >gi|300871643|ref|YP_003786516.1| hypothetical protein BP951000_2037 [Brachyspira pilosicoli 95/1000] gi|300689344|gb|ADK32015.1| hypothetical protein BP951000_2037 [Brachyspira pilosicoli 95/1000] Length = 249 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 10/196 (5%) Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 Y + IT+ RV +IA II +P+G+ +G+ I + P + P + PL Sbjct: 47 YTVQNLLITLERVFRGFLIACIIGLPLGLIMGYSKPILLAVSPIINSIRQVPIMAWIPLA 106 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + L+ + ++ N I G ++ A S I Sbjct: 107 IVWFGLGDG----PTIFLITMSAIFPLIINTIDGVRGIDPNYINAARSMGAKNIDIMLDI 162 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILPG P ++TG A G W + I +E + + G G + E+ ++ P++ Sbjct: 163 ILPGALPSFLTGCRLALGLGWMSVICAEFIA------TSKGFGFILVEAQQRLETPKLYA 216 Query: 558 GVLIMCCFVLALNRFL 573 +++ +++R L Sbjct: 217 LMIVSALIGFSMDRIL 232 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 75/195 (38%), Gaps = 14/195 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T R+ +I+ + + S+ + + + PI++ ++ +PI+ ++ +V+F Sbjct: 52 LLITLERVFRGFLIACIIGLPLGLIMGYSKPILLAVSPIINSIRQVPIMAWIPLAIVWFG 111 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 IF I S ++ + + + I + +RS + Sbjct: 112 LGDGP--------TIFLITMSAIFPLIINTIDGVRGIDPNYINAARSMGAKNIDIMLDII 163 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + +++ GW V+ +E I G G + A + + + Sbjct: 164 LPGALPSFLTGCRLALGLGWMSVICAEFIATSK------GFGFILVEAQQRLETPKLYAL 217 Query: 245 MLTMLGVIFLYDQLL 259 M+ + F D++L Sbjct: 218 MIVSALIGFSMDRIL 232 >gi|15599131|ref|NP_252625.1| permease of ABC taurine transporter [Pseudomonas aeruginosa PAO1] gi|107103453|ref|ZP_01367371.1| hypothetical protein PaerPA_01004523 [Pseudomonas aeruginosa PACS2] gi|116051976|ref|YP_789181.1| taurine ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218889782|ref|YP_002438646.1| putative permease of ABC taurine transporter [Pseudomonas aeruginosa LESB58] gi|254236829|ref|ZP_04930152.1| hypothetical protein PACG_02849 [Pseudomonas aeruginosa C3719] gi|254242624|ref|ZP_04935946.1| hypothetical protein PA2G_03383 [Pseudomonas aeruginosa 2192] gi|9950122|gb|AAG07323.1|AE004811_6 probable permease of ABC taurine transporter [Pseudomonas aeruginosa PAO1] gi|115587197|gb|ABJ13212.1| probable permease of ABC taurine transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126168760|gb|EAZ54271.1| hypothetical protein PACG_02849 [Pseudomonas aeruginosa C3719] gi|126196002|gb|EAZ60065.1| hypothetical protein PA2G_03383 [Pseudomonas aeruginosa 2192] gi|218770005|emb|CAW25767.1| probable permease of ABC taurine transporter [Pseudomonas aeruginosa LESB58] Length = 272 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 21/244 (8%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382 P +R + + ++ A W + ++ + L +W Sbjct: 13 PVPRKRRLPGDRRRWAAGASVLALALLWWAATRFGWVDVLFLPAPEQLFEALQRLWQEGY 72 Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ + A + IP+G+ +G P + + P + P + Sbjct: 73 LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 132 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V L+ LL+ +L AG + + W+ Sbjct: 133 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 188 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 RY+ILP P +TG A G W+ + +E+ + GLG + + + + Sbjct: 189 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 242 Query: 555 VVLG 558 VV+G Sbjct: 243 VVVG 246 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 75 ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 134 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F EL+ + I+ + + + + + R + R S WQ Sbjct: 135 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 186 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 Y+ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 187 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 240 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + ++ + + R W Sbjct: 241 DVVVVGILLIAAIALAFELGLRWVQRRFAAW 271 >gi|167033283|ref|YP_001668514.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166859771|gb|ABY98178.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 251 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 13/210 (6%) Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ +V +V IW +++ R++V +++A +I +P+G+ +G H+ + P Sbjct: 44 TLASLVELLGQGEVYGHIW---VSLKRILVGLLLALLIGVPLGLLVGSYRHLEAATTPAF 100 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L + P+VV + + + L+ F W IL N AG + ++ Sbjct: 101 QFLRMISPLSWMPVVVMLMGVG----DQPIYFLLAFAALWPILLNTAAGVRQLDARWLQL 156 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + S T W +I+PG+ + +TG A G W + E+ + GLG + Sbjct: 157 SRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLG------VSAGLGYF 210 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 I ++ ++ ++ E++ VL++ L+ Sbjct: 211 ILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 80/221 (36%), Gaps = 14/221 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G+ P + + L + + + R+L ++++LL L R L Sbjct: 34 GLSARFSPAATLASLVELLGQGEVYGHIWVSLKRILVGLLLALLIGVPLGLLVGSYRHLE 93 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 P ++ I L ++ V+ + F + + +W + + Sbjct: 94 AATTPAFQFLRMISPLSWMPVVVMLMGVG--------DQPIYFLLAFAALWPILLNTAAG 145 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + + ++SRS + W+ + VP + ++ + +++ W +V EM+ V Sbjct: 146 VRQLDARWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVRLAIGILWIVLVPCEMLGVSA 205 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G +I ++ +L + + F+ D L Sbjct: 206 ------GLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDAL 240 >gi|124266119|ref|YP_001020123.1| nitrate ABC transporter permease [Methylibium petroleiphilum PM1] gi|124258894|gb|ABM93888.1| nitrate ABC transporter, permease protein, putative [Methylibium petroleiphilum PM1] Length = 274 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 101/260 (38%), Gaps = 10/260 (3%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + L R+ + R L + A ++ ++ + Y Sbjct: 11 RVLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKAWAGLLGNAGY 70 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + Y+ ++ RV+ A +I IP+G+ + + + P +LL P + Sbjct: 71 WESWYL------SLVRVLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAW 124 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P + + + ++ + G + I+ NV+ GA + + + A + + W Sbjct: 125 VPASII----FWPTAEMSIAFVTFLGAFFTIVINVVGGAKSIDVRYFQAAQAMGASQWDI 180 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 +R ++LP P V G+ G W + +E+ S G GLG +I S GS+ Sbjct: 181 FRRVVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYE 240 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++V+G++ + A + L Sbjct: 241 QIVVGMISIGIAGFACSEAL 260 Score = 113 bits (284), Expect = 7e-23, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 104/257 (40%), Gaps = 15/257 (5%) Query: 10 FISRRIFPNIFDLLAFVLVIGI-------INILLHGIQETTVPRDIVDIVPITLDVHSLP 62 +SR I L AFV++ + + L I + P ++ L Sbjct: 12 VLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKAWAGLLGNAGYW 71 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + +R+L+ ++L + A S+ + V+ P ++++ IP L ++ ++++ Sbjct: 72 ESWYLSLVRVLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAWVPASIIF 131 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + AE++ F F + + ++ +I + +++ S W F Sbjct: 132 W--------PTAEMSIAFVTFLGAFFTIVINVVGGAKSIDVRYFQAAQAMGASQWDIFRR 183 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++P +V + M W VVA+EMI G G+G +I + I+ Sbjct: 184 VVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYEQIV 243 Query: 243 YAMLTMLGVIFLYDQLL 259 M+++ F + L Sbjct: 244 VGMISIGIAGFACSEAL 260 >gi|317121330|ref|YP_004101333.1| binding-protein-dependent transporters inner membrane component [Thermaerobacter marianensis DSM 12885] gi|315591310|gb|ADU50606.1| binding-protein-dependent transport systems inner membrane component [Thermaerobacter marianensis DSM 12885] Length = 356 Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 90/259 (34%), Gaps = 25/259 (9%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI---------------VNH 370 L +R + W ++ +A+ + W+ + + V Sbjct: 91 RGRGTGAGLTWRRRRPVLGRERWLSILSPIAMLLIWEILVRLGWLDARFFPPPSRVAVRF 150 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + I++ RV++ ++ + +G+ +G P + + ++P L P Sbjct: 151 ADMVADGTLFHHLGISLMRVILGFAAGAVPAVAIGLTMGLFPWVRAVLEPVVAALYPIPK 210 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 PL++ + + + G +L N +AG + +VA +F + Sbjct: 211 IALLPLLLMIFGVGET----FKVVTIALGCFTLVLVNTVAGVVNIERIYVDVARNFGASR 266 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 ++R + PG P G G + + +E+ +GLG I S + Sbjct: 267 LDFYRTVAWPGALPMIFAGLKLGMGVSLLLIVAAEMIG------ARSGLGYLIWNSYQVW 320 Query: 551 SFPEVVLGVLIMCCFVLAL 569 + +G+++M F Sbjct: 321 DMAAMYIGLVLMSFFGYVF 339 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 98/272 (36%), Gaps = 18/272 (6%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHS 60 + P + R + +I +A +L+ I+ L + P + + + Sbjct: 99 LTWRRRRPVLGRERWLSILSPIAMLLIWEILVRLGWLDARFFPPPSRVAVRFADMVADGT 158 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + + +R++ + + VL P++ + IP + L + Sbjct: 159 LFHHLGISLMRVILGFAAGAVPAVAIGLTMGLFPWVRAVLEPVVAALYPIPKIALLPLLL 218 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + F KV+ L + + + NI R +V+R+F S + Sbjct: 219 MIFGVGETFKVVTIALGCFTLVLV--------NTVAGVVNIERIYVDVARNFGASRLDFY 270 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + P ++P + + + M +VA+EMI G+G I + + D+ A Sbjct: 271 RTVAWPGALPMIFAGLKLGMGVSLLLIVAAEMIG------ARSGLGYLIWNSYQVWDMAA 324 Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWSNK 269 + ++ M +++ L R ++ W + Sbjct: 325 MYIGLVLMSFFGYVFTMALNELERVVLPWRPR 356 >gi|123441275|ref|YP_001005262.1| glycine betaine transporter membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088236|emb|CAL11025.1| glycine betaine/L-proline transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 393 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ + +V I + A T +L+++ + Sbjct: 138 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 197 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 198 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 254 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 255 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 309 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 310 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360 Score = 91.9 bits (227), Expect = 3e-16, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 96/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + P Sbjct: 100 PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 145 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + +T+ V+ + + Sbjct: 146 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 198 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 199 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 254 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 255 ALPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 314 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 315 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360 >gi|21241618|ref|NP_641200.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] gi|21106977|gb|AAM35736.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] Length = 283 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 14/237 (5%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L F + + + L P + L + + LR+L+ I Sbjct: 34 LVFFAGLELASALGWTPSYLLPPPSQILRTLADEASRGLASHVGASVLRVLAGFSIGAGL 93 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + SR L +L P ++++P L ++ +++ E I I Sbjct: 94 GLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGID--------EAPKITLI 145 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + L + R L E+ S+ LS + + +P ++P + + S+S Sbjct: 146 AIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSL 205 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W F+VA+E+I G+G ++ + ++ A++ + + L D LL Sbjct: 206 AWMFLVAAELIA------ATRGLGYLLSDGRETSRPDIVIGAIVLLALLGKLSDGLL 256 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 98/261 (37%), Gaps = 14/261 (5%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI----GYIVNHFT 372 R + P L+L ++ + +F+ + A+G + I+ Sbjct: 6 LRVSASVAGTPPRPRLRLPASSLGWLLPLVFFAGLELASALGWTPSYLLPPPSQILRTLA 65 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + ++ RV+ I + + + VG+ +G + + P Q L A P+ Sbjct: 66 DEASRGLASHVGASVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLA 125 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + PL++ + L+ G + + V++G E+ S+ ++ R Sbjct: 126 WVPLLLLWMGI----DEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPR 181 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R I+LP P TG T+ AW + +E+ + T GLG +++ E Sbjct: 182 LVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSRP 235 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 V+ ++++ + L Sbjct: 236 DIVIGAIVLLALLGKLSDGLL 256 >gi|297195393|ref|ZP_06912791.1| glycine betaine ABC transport system permease [Streptomyces pristinaespiralis ATCC 25486] gi|197719237|gb|EDY63145.1| glycine betaine ABC transport system permease [Streptomyces pristinaespiralis ATCC 25486] Length = 874 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 95/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L GI+ ++ ++ + +D L + A T +L A +++L+ Sbjct: 49 LLFAGILAVVAWWLRGLLAGVLAFAGFAL-IDSIELWEDAMSTLSLVLVATLVTLVIAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A++SR + ++ P+LD MQ++P + +L +++F G V G IFA+ Sbjct: 108 LGIWASRSRTVSTIVRPVLDFMQTMPAMVYLIPGIIFFGV---GVVPGIIATIIFALPPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDEELVEAAEAFGTTPRSTLLRVQLPLALPTIMAGINQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 220 MVVIAGMVGGGGLGGA-------VYRAIGNVDIGLGFEAGVSIVILAMYLDRM 265 Score = 87.7 bits (216), Expect = 6e-15, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 73/234 (31%), Gaps = 12/234 (5%) Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350 + + ++ LS + + + + + W+ Sbjct: 3 RIHLGDWVDSGVDWLQRHLSWLFDAISSLVTGMYDGIDAALSAPAPLLFAGILAVVAWW- 61 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + +A +A+ I + ++D + T+ V+V ++ +I +P+GIW Sbjct: 62 LRGLLAGVLAFAGFALIDSIELWEDAMS-------TLSLVLVATLVTLVIAVPLGIWASR 114 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +S+ ++P + PA V+ + + + + + Sbjct: 115 SRTVSTIVRPVLDFMQTMPAMVYLIPGIIFFGVGVVPGIIATIIF----ALPPGVRMTEL 170 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 G + E A +F T + LP P + G + +++ Sbjct: 171 GIRQVDEELVEAAEAFGTTPRSTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224 >gi|251790215|ref|YP_003004936.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] gi|247538836|gb|ACT07457.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] Length = 566 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 86/570 (15%), Positives = 183/570 (32%), Gaps = 82/570 (14%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 L P ++RRI + LA +L+ + + L + V ++L L Sbjct: 57 LTPRLTRRIVAPLLLPLAVLLLWSLSSTLGWMPPQILPAPSRVAATAVSLLQGDLLSQLL 116 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R++S + +L + L S R +L P + + IP LG++ +V F Sbjct: 117 ISLHRLVSGLAAGVLAGTLLGALMGASVRAERLLYPTVYALAQIPTLGWVPLFMVLFGID 176 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 K+ + + + +T + + ++P L +V+R+ + L +P Sbjct: 177 DGLKLA--------VLIKAVIVPVTLHSQRGVRDVPPALLDVARTL---RLTRLTRLILP 225 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++P + +++S W ++ E++ GIG + + L +L + Sbjct: 226 AALPVWFTGLRLALSQAWVSLIVVELLASSQ------GIGYLMVWGRQLFQLDIVLVCIA 279 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFF 306 + L W Sbjct: 280 VIGLTGLLM----------------------------------------------EWGIN 293 Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF----WFCVVCGVAIGIAWQ 362 + +G +R + + L + + + W + G + Sbjct: 294 QLDQRLIAWPHPPVGRLRAAPAGHAIGLVIPLLLLALWQLASHHGWVDALLLPPPGEVLR 353 Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 +I V + D + +++R + + + G+ +G + P Sbjct: 354 AIWQGVRDGSLPDAMRH------SLWRALAGGALGISAGLLAGLALGLSTRAEAVFTPTL 407 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 LL + PL+ + V N + + + +L G +EV Sbjct: 408 TLLRQVALFAWLPLITAWVG----NDDGGKVTFIALVAFFPMLVATHRGVHRRSLALQEV 463 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A + R R +ILP P TG A AW +I +E G+G+ Sbjct: 464 AQVLRLPWLRRLRLLILPDAAPALFTGLRLAMIYAWLGAIGAEYFMSSG-----AGIGSL 518 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + + P ++ G+L++ ++ Sbjct: 519 MINAQQLLDMPIILSGMLLIGVTGTLIDSL 548 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 16/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +++ + + SLP + R L+ + + + S R V Sbjct: 345 LPPPGEVLRAIWQGVRDGSLPDAMRHSLWRALAGGALGISAGLLAGLALGLSTRAEAVFT 404 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L +++ + + +L + N GKV L A F M + ++ + Sbjct: 405 PTLTLLRQVALFAWLPLITAWVGNDDGGKVTFIALVAFF--------PMLVATHRGVHRR 456 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L+EV++ RL ++ L +P + P L + ++M W + +E + Sbjct: 457 SLALQEVAQVLRLPWLRRLRLLILPDAAPALFTGLRLAMIYAWLGAIGAEYFMSSGA--- 513 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSN 268 GIGS + A + D+ IL ML + L D L L + M W N Sbjct: 514 --GIGSLMINAQQLLDMPIILSGMLLIGVTGTLIDSLGQRLEQRMTRWRN 561 >gi|294341848|emb|CAZ90277.1| putative Nitrate transport permease protein nrtB [Thiomonas sp. 3As] Length = 285 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 107/269 (39%), Gaps = 13/269 (4%) Query: 314 KKLCRTLGVIRFHFPEN-FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + ++ IR P ++ L + V ++ W + + + + Sbjct: 23 GQRWQSRLRIRAAIPRWVYIVLSISGFVLPLIAWQWIAASGWMGSLFLPSPLDVVHSFVD 82 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + I+++RVV+ ++A+ I +P+GI+IG + +QP + PA+ Sbjct: 83 WTQNG-LSNDTLISIYRVVMGFVLAAAIGVPLGIYIGAYKWFEALLQPVNDFVRYMPASA 141 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 F PLV+ V + ++ G + I+ V P ++ EVA + Sbjct: 142 FIPLVLLWVGIGEGSK----IAIIFIGVIFQIIVMVADAVRRVPENYLEVAYTMGARQGE 197 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + +I GI P + G AW +V+E+ + +GLG I +S + Sbjct: 198 VMQLVIWRGILPELLDILRINMGWAWTYLVVAEMVA------ANSGLGFQILQSQRFLNT 251 Query: 553 PEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 P++ +G+ I+ L + + +Y Sbjct: 252 PKIFVGIFIIGLIGLLFD-LAFRWIYRLA 279 Score = 95.4 bits (236), Expect = 3e-17, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 79/219 (36%), Gaps = 15/219 (6%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 G P D+V + + L + R++ V++ + Sbjct: 66 GSLFLPSPLDVVHSF-VDWTQNGLSNDTLISIYRVVMGFVLAAAIGVPLGIYIGAYKWFE 124 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 +L P+ D ++ +P F+ +++ K I IF ++ + + + Sbjct: 125 ALLQPVNDFVRYMPASAFIPLVLLWVGIGEGSK--------IAIIFIGVIFQIIVMVADA 176 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 + +P + EV+ + + + +P L+ + ++M W ++V +EM+ Sbjct: 177 VRRVPENYLEVAYTMGARQGEVMQLVIWRGILPELLDILRINMGWAWTYLVVAEMVAANS 236 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 G+G I + + + I + + + L+D Sbjct: 237 ------GLGFQILQSQRFLNTPKIFVGIFIIGLIGLLFD 269 >gi|21623830|dbj|BAC00966.1| ABC-type transporter membrane permease component [Pseudomonas putida] Length = 279 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 94/278 (33%), Gaps = 15/278 (5%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 P++ R +R P ++ + + + + I Sbjct: 7 PVTGKRNAHHRPAAKLRRPLPTRWISTLTLASLLLAWWLVTAAGWIEPLFLPSPADILSK 66 Query: 368 VNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Q + ++ R+ V ++ A++ IPVGI IG+ + P + Sbjct: 67 AGTLLTQGYMDASLWQHLGASLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFY 126 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL+V L+ LL+ I G A S Sbjct: 127 RPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQS 182 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 T + R++ILP P +TG G W+ + +E+ + T+GLG + Sbjct: 183 LGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQS 236 Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + + VVLG+L++ AL R L L + Sbjct: 237 AAQFLVTDVVVLGILLIALIAFALEMSLRALQRKLVPW 274 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 101/273 (36%), Gaps = 26/273 (9%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVH-- 59 P RR P + + + + L+ P DI+ L Sbjct: 17 RPAAKLRRPLPTRWISTLTLASLLLAWWLVTAAGWIEPLFLPSPADILSKAGTLLTQGYM 76 Query: 60 --SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 SL Q+ + R+ A++ + L +R +L P+++ + IP L +L Sbjct: 77 DASLWQHLGASLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLP 136 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 V++ EL+ + I+ + + + + + ++S + Sbjct: 137 LIVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATKA 188 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 Q ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 189 QLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLV 242 Query: 238 LLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 243 TDVVVLGILLIALIAFALEMSLRALQRKLVPWH 275 >gi|296387539|ref|ZP_06877014.1| taurine ABC transporter permease [Pseudomonas aeruginosa PAb1] Length = 262 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 86/244 (35%), Gaps = 21/244 (8%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--- 382 P +R + + ++ A W + ++ + L +W Sbjct: 3 PVPRKRRLPGDRRRWAAGASVLALALLWWAATRFGWVDVLFLPAPEQLFEALQRLWQEGY 62 Query: 383 --------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV++ + A + IP+G+ +G P + + P + P + Sbjct: 63 LDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYL 122 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V L+ LL+ +L AG + + W+ Sbjct: 123 PLIVIWFGIGELSK----VLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQVV 178 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 RY+ILP P +TG A G W+ + +E+ + GLG + + + + Sbjct: 179 RYVILPSALPEVLTGLRIALGVGWSTLVAAELIA------ANRGLGFMVQSAAQFLATDV 232 Query: 555 VVLG 558 VV+G Sbjct: 233 VVVG 236 Score = 113 bits (284), Expect = 7e-23, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 17/211 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + LR+L A+ ++L L + G L P+++ + IP L +L Sbjct: 65 ASLLQHVGTSLLRVLLALGAAVLTAIPLGVLMGLNPLAGAALDPLVEFYRPIPPLAYLPL 124 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F EL+ + I+ + + + + + R + R S WQ Sbjct: 125 IVIWFGIG--------ELSKVLLIYLALFAPLLIATAAGVRRVDRSRVQAVRCLGASRWQ 176 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 Y+ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 177 VVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAAN------RGLGFMVQSAAQFLAT 230 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + ++ + + R W Sbjct: 231 DVVVVGILLIAAIALAFELGLRWVQRRFAAW 261 >gi|83950286|ref|ZP_00959019.1| glycine betaine/proline ABC transporter, permease protein, putative [Roseovarius nubinhibens ISM] gi|83838185|gb|EAP77481.1| glycine betaine/proline ABC transporter, permease protein, putative [Roseovarius nubinhibens ISM] Length = 513 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 97/234 (41%), Gaps = 16/234 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 + + ++ + + + + L + Q A T +++A +I ++F Sbjct: 289 PITMAVLLFVAYRTAGPRTAIFVGASLA-YLALFGFWQTAMDTMSLVVAASIICVVFGLP 347 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 +KSRR ++ PILD+MQ+IP +L + +F GK G IFA+ Sbjct: 348 LGIWVSKSRRGKAIITPILDVMQTIPSFVYLLPAIAFFS---IGKPPGILATVIFAMP-- 402 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + +P + +E + +F + Q + +P +MP ++ + + Sbjct: 403 ---PMVRLTALGILQVPENTKEAALAFGANPRQLLTKVELPLAMPSIMTGINQVVMMSLS 459 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 VV + +I G G+G + A++ + + A + + + + D+++ Sbjct: 460 MVVVAALIGAG-------GMGYIVTEALENTETGRGVLAGIGIALLAMMIDRVV 506 Score = 90.4 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 87/245 (35%), Gaps = 11/245 (4%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L ++ V I ++ ++ ++ Y + TM Sbjct: 273 RGMLGAITSVFVGTPWPITMAVLLFVAYRTAGPRTAIFVGASLAYLALFGFWQTAMDTMS 332 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 VV II + +P+GIW+ + I P ++ P+ V+ + ++++ + Sbjct: 333 LVVAASIICVVFGLPLGIWVSKSRRGKAIITPILDVMQTIPSFVYL---LPAIAFFSIGK 389 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + +IF ++ G P + KE A +F + + LP P +T Sbjct: 390 PPGILATVIF-AMPPMVRLTALGILQVPENTKEAALAFGANPRQLLTKVELPLAMPSIMT 448 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G + + +V+ + G G+G + E+ E VL + + + Sbjct: 449 GINQVVMMSLSMVVVAALIGAG-------GMGYIVTEALENTETGRGVLAGIGIALLAMM 501 Query: 569 LNRFL 573 ++R + Sbjct: 502 IDRVV 506 >gi|317049860|ref|YP_004117508.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316951477|gb|ADU70952.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 277 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 15/263 (5%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 F + L + + ++ + + Q + ++ + Q + Sbjct: 20 WPFSRQLSLSLLSVALLLLVWWGVTALGLIAPLFLPAPQQVLKKLLLIASPQGFMDATLW 79 Query: 383 --GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ R++V + A++I IPVGI +G P I + P +L P + PL+V Sbjct: 80 QHLGASLARMLVALFFAALIGIPVGIAMGLSPAIRGLLDPLIELYRPVPPLAYLPLMVIW 139 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + LL+ + + +AG A + T W+ R++ILP Sbjct: 140 FGIGETSK----ILLIYLAIFAPVTLSTLAGVKNAQQVRIRAAQALGATRWQLLRWVILP 195 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P +TG G W+ + +E+ + T GLG + + E + V+ G+L Sbjct: 196 GALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIL 249 Query: 561 IMCCFVLALN---RFLWHPLYLY 580 ++ +L R L L + Sbjct: 250 VIALIAFSLELGLRALQRRLTPW 272 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 101/244 (41%), Gaps = 17/244 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 V +G+I L + + + ++ P +L Q+ + RML A+ + L Sbjct: 43 VTALGLIAPLFLPAPQQVLKKLLLIASPQGFMDATLWQHLGASLARMLVALFFAALIGIP 102 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 S + +L P++++ + +P L +L V++F E + I I+ + Sbjct: 103 VGIAMGLSPAIRGLLDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILLIYLA 154 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +T S + N + +++ + WQ ++ +P ++P ++ + + + GW Sbjct: 155 IFAPVTLSTLAGVKNAQQVRIRAAQALGATRWQLLRWVILPGALPEILTGLRIGLGVGWS 214 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRP 262 +VA+E+I G+G + A + +L +L + + F + + L R Sbjct: 215 TLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGILVIALIAFSLELGLRALQRR 268 Query: 263 MIVW 266 + W Sbjct: 269 LTPW 272 >gi|170724167|ref|YP_001751855.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] gi|169762170|gb|ACA75486.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] Length = 260 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 20/244 (8%) Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389 +F Q+ ++ ++ L F + + AWQ + V+ ++ R Sbjct: 20 SFWQVAASAKLDLGLFSFTYVPTPRAVLDAAWQLLTSSA----------VLAHLGSSLSR 69 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 V +A+++ + +G+ IG + P ++L PA + PL + L+ Sbjct: 70 VFAGYSVAALLGVALGLLIGRSQWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELS-- 127 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + + G + IL N + G A A S W R ++LPG P VTG Sbjct: 128 --MVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTG 185 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 G +W + +E+ S G+G Y ES ++P++++G+L++ + Sbjct: 186 LAIGMGTSWFCLVTAEMISG------QFGIGYYTWESYTLQNYPDIIVGMLLIGVLGMGS 239 Query: 570 NRFL 573 + + Sbjct: 240 SALV 243 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 93/228 (40%), Gaps = 14/228 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ L PR ++D L ++ + + R+ + ++ L L Sbjct: 30 LDLGLFSFTYVPTPRAVLDAAWQLLTSSAVLAHLGSSLSRVFAGYSVAALLGVALGLLIG 89 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 +S+ L+P L++++ IP + ++ ++ F +EL+ +F FT ++ + Sbjct: 90 RSQWAEDTLLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMVFITFTGALFPIL 141 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + + L +RS W + +P ++P +V + + M WF +V +E Sbjct: 142 LNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAE 201 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 MI GIG Y + Q+ I+ ML + + L+ Sbjct: 202 MISG------QFGIGYYTWESYTLQNYPDIIVGMLLIGVLGMGSSALV 243 >gi|83950025|ref|ZP_00958758.1| taurine ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83837924|gb|EAP77220.1| taurine ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 424 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 10/170 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRVVV +I +++ IP+G +G P + + P PLV+ Sbjct: 231 GYSLFRVVVGFLIGALVGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLVIIWFGI 290 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+ W + +G S A S + W+ RY+I+P Sbjct: 291 GEAGK----IILLFLAALWIMAIAARSGVSGVAISKVHAAYSLGASKWQIMRYVIIPNSL 346 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 P TGA A G W + +E+ + G G I ++ + Sbjct: 347 PEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMVASRFQNTD 390 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 85/213 (39%), Gaps = 17/213 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L ++ + R++ +I L S PI++ M+ +P L + Sbjct: 225 TLWEHLGYSLFRVVVGFLIGALVGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLV 284 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W M + + + + S S WQ Sbjct: 285 IIWFGIGEAGK--------IILLFLAALWIMAIAARSGVSGVAISKVHAAYSLGASKWQI 336 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 Y+ +P S+P + ++M W VVA+E++ G G I +A + Q+ Sbjct: 337 MRYVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEQGAGMMIMVASRFQNTD 390 Query: 240 AILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 ++ ++ + + F D L+ R ++ W + Sbjct: 391 IVILGIILIGVIGFGIDMLMRWAERVLVPWKGR 423 >gi|45358760|ref|NP_988317.1| binding-protein dependent transport system inner membrane protein [Methanococcus maripaludis S2] gi|45047626|emb|CAF30753.1| transport permease protein [Methanococcus maripaludis S2] Length = 253 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 96/247 (38%), Gaps = 14/247 (5%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-----IWLGCIT 386 +++ N + + + W + + + + +++ V + I ++ Sbjct: 1 MKILKNLTLPIIGILAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVS 60 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + RV++ IA IP+G+ +G+ I+ +LL P + PL ++ Sbjct: 61 IKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGES 120 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + + ++ G + IL N I+G + P E A + + + +++P P Sbjct: 121 SMH----FIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDI 176 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 +TG G AW + +E+ GLG I + VV ++I+ Sbjct: 177 LTGLRVGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSKMNIVVASMIIIGIIG 231 Query: 567 LALNRFL 573 + L++ L Sbjct: 232 IILDKGL 238 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 78/204 (38%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L + + R+L I+ F L + + +++++ IP L + Sbjct: 48 LGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAW 107 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + + +F F IF + + + + ++P + E +++ S Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGS 159 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + VP S P ++ + + W VVA+EM+ D G+G I A Sbjct: 160 TKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYSL 214 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ +M+ + + + D+ L Sbjct: 215 SKMNIVVASMIIIGIIGIILDKGL 238 >gi|239624587|ref|ZP_04667618.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520973|gb|EEQ60839.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 273 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D ++ ++ + +A II P+G+ +G+ + + P +L+ PA + Sbjct: 70 PDGATLMQNLFASLRLSLSGFGMAIIIGTPLGLLMGWYKPVQKLVNPIFELIRPIPAIAW 129 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL++ + NL S ++ F I+ N G + + + + W Sbjct: 130 IPLIILVLGIG----NLAKSFIIFFAAFVPIVINSYTGIRQVNKTYVNFSRTCGASNWTI 185 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + + +P P G + G AW+ + +E+ + GLG I + G Sbjct: 186 FLKVGVPSSLPMIFGGYKVSLGNAWSTLVAAEMLA------SDRGLGYMILMGRQYGKIN 239 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +++G+ ++ + L L Sbjct: 240 IILMGMAVIGVVGVILYALL 259 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 82/205 (40%), Gaps = 14/205 (6%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 + D +L Q + LS ++++ L + + ++ PI ++++ IP + Sbjct: 69 SPDGATLMQNLFASLRLSLSGFGMAIIIGTPLGLLMGWYKPVQKLVNPIFELIRPIPAIA 128 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 ++ ++ LA F IF + + + Y + + + SR+ Sbjct: 129 WIPLIILVLGIGN--------LAKSFIIFFAAFVPIVINSYTGIRQVNKTYVNFSRTCGA 180 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 S W F +GVP S+P + +S+ W +VA+EM+ G+G I + + Sbjct: 181 SNWTIFLKVGVPSSLPMIFGGYKVSLGNAWSTLVAAEMLA------SDRGLGYMILMGRQ 234 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLL 259 + IL M + V + LL Sbjct: 235 YGKINIILMGMAVIGVVGVILYALL 259 >gi|157371969|ref|YP_001479958.1| glycine betaine transporter membrane protein [Serratia proteamaculans 568] gi|157323733|gb|ABV42830.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] Length = 374 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q +++ +V I + A T +L+A+ + Sbjct: 119 LLGMPAPIAILLFSLIAWQLSSLGMGAATLVSLIAIGAIGAWSQAMVTLALVLTALFFCI 178 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S+ G V+ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 179 VIGLPLGIWLARSKHAGKVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 235 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 236 A-----LPPIVRLTILGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTL 290 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 291 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 341 Score = 93.1 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 97/291 (33%), Gaps = 26/291 (8%) Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS 341 +WV + T+ + ++ F + V + + P Sbjct: 77 KTWVPFDSWVTHGIDWLVLHFRPLFQGIRVPVDFILSGFQQLLLGMPAPI---------- 126 Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401 + +F ++G+ ++ ++ + +T+ V+ + +I Sbjct: 127 -AILLFSLIAWQLSSLGMGAATLVSLIAIGAIGAWSQAM----VTLALVLTALFFCIVIG 181 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+GIW+ H I+P + PA V+ +V N+ ++ I Sbjct: 182 LPLGIWLARSKHAGKVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFAL 237 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 I+ I G P D E A SF + + + LP P + G A + Sbjct: 238 PPIVRLTILGIKQVPEDLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMV 297 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 298 VIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 341 >gi|332704984|ref|ZP_08425069.1| ABC-type proline/glycine betaine transport system, permease component [Lyngbya majuscula 3L] gi|332356161|gb|EGJ35616.1| ABC-type proline/glycine betaine transport system, permease component [Lyngbya majuscula 3L] Length = 678 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 15/197 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + A T +++A+V +L A S R+ L P+LD MQ++P +L V+ Sbjct: 115 WEQAMTTLALVVTAVVFCVLIGISLGIACASSDRVEKFLRPLLDAMQTLPSFVYLVPVVM 174 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F G V G +FA+ + + + ++ E + +F + Q W Sbjct: 175 LFG---IGAVPGVIATLVFAVP-----PLIRLTNLGIRQVSTEVVEAAIAFGSTPRQMLW 226 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP ++ + ++ V + MI VG G+G + + ++ Sbjct: 227 EVQIPLAMPTILAGVNQAILLALSMSVVTSMIGVG-------GLGQMVLQGLGRVNVGLA 279 Query: 242 LYAMLTMLGVIFLYDQL 258 L+++ + + D++ Sbjct: 280 AVGGLSIVLIAVMLDRI 296 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 86/279 (30%), Gaps = 22/279 (7%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 ++ + + F P + + FL + + + I W Sbjct: 40 WITAVVNFLVDNFRPFFQAISLP---ITWTLEGIQSLFLSIPPLIFLIILALIVWQIAGG 96 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 +AI + T T+ VV ++ +I I +GI Sbjct: 97 KIAIYSLFA--------LTLIGFFGAWEQAMTTLALVVTAVVFCVLIGISLGIACASSDR 148 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + ++P + P+ V+ VV + + + ++ G Sbjct: 149 VEKFLRPLLDAMQTLPSFVYLVPVVMLFGIGAVPGVIATLVF----AVPPLIRLTNLGIR 204 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 + E A +F T + + +P P + G A A + S+V+ + G Sbjct: 205 QVSTEVVEAAIAFGSTPRQMLWEVQIPLAMPTILAGVNQAILLALSMSVVTSMIGVG--- 261 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + + + +G L + + L+R Sbjct: 262 ----GLGQMVLQGLGRVNVGLAAVGGLSIVLIAVMLDRI 296 >gi|145594188|ref|YP_001158485.1| binding-protein-dependent transport systems inner membrane component [Salinispora tropica CNB-440] gi|145303525|gb|ABP54107.1| binding-protein-dependent transport systems inner membrane component [Salinispora tropica CNB-440] Length = 664 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 83/590 (14%), Positives = 190/590 (32%), Gaps = 52/590 (8%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLP 62 L + I++ + +L ++ V+ +++ + V + + L Sbjct: 90 LVTFVQGLIAQPAYGRPVPVLGWLGVVALVSYVSWAFANWRVGLLAAGGFTL-FGLQGLW 148 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 Q + T L A+ +SLLF LA S R ++ P+LD+MQ++P +L + Sbjct: 149 QESMDTLALTLVAVFVSLLFGIPLGILAGVSDRFHRMITPVLDLMQTMPTFVYLAPLTLV 208 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F+ +A A + + ++P E + SF + Q+ Sbjct: 209 FLIG--------PASATIATLIYAMPPAIRITAHGIRSVPAPPVEATDSFGATRRQRLTK 260 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 +P S +V + ++ V + +I PG+G + A++ D+ Sbjct: 261 ALLPLSKRTIVLGVNQTIMAALAMVTVAALI-------DAPGLGKTVIKALQTTDVGTAF 313 Query: 243 YAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPAD----------------SWVL 286 A + ++ + + D+ + + R E+ G S++ Sbjct: 314 NAGVAIVVMAIVLDR------VTTAASIRAEQGGGESSPRIRRLLLAGFGLVAAVCSYLS 367 Query: 287 YLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDI 346 Y + + G + L + + N + + + Sbjct: 368 YTYLWASEFPDGGQLGEYLSQGATAVTTWAQNNLSDVTAAVKDGVTIALLNPLEALLAES 427 Query: 347 FWFCVVCGVAIGIA----WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 W+ + + + A ++ + IT+ +V ++ + + Sbjct: 428 PWWLMGAVIVVLAALIGNLRTAAVAAVCVGLLVGSGLWNASMITLAMTLVATLLVVTLGV 487 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 VG+W+G I+P PA V+ VV+ S + + + Sbjct: 488 VVGVWMGRSSRADRIIRPVLDAGQTMPAFVYLIPVVALFSVSRFSAIVAGVVYAAPVA-- 545 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + V G A P E A++ W+ + LP + + + Sbjct: 546 --IKIVADGVRAIPESTVEAATAAGSNSWQTITKVQLPMARQSLMLATNQGLIYVLSMVV 603 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G + +A ++ + + + + + + L+R Sbjct: 604 IGGLVGAGALGYEV------VAGFSQGQLYGKGLAAGVAIVVLGIMLDRI 647 >gi|322831482|ref|YP_004211509.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] gi|321166683|gb|ADW72382.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] Length = 399 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 16/235 (6%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFT 83 I I+ L Q +V + L A T +L+++ +L Sbjct: 147 LPAPIAILVFALLAWQMAGFGMGAATLVSLVLIGAIGAWSQAMVTLALVLTSLFFCILIG 206 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 A+S+R ++ P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 207 LPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA-- 261 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P DL E ++SF S Q + + +P +MP ++ + ++ Sbjct: 262 ---LPPVVRLTILGINQVPEDLIEAAKSFGSSPRQLLFKVQLPLAMPTIMAGINQTLMLA 318 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ ++ + + D+L Sbjct: 319 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGAGIVILAIILDRL 366 Score = 95.8 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 88/236 (37%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 + L+ + V +AWQ G+ + T ++ + +G +T+ V+ + Sbjct: 142 HGLESLPAPIAILVFALLAWQMAGFGMGAATLVSLVLIGAIGAWSQAMVTLALVLTSLFF 201 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 +I +P+GIW+ + I+P + PA V+ +V N+ ++ Sbjct: 202 CILIGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVT 257 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 I ++ I G + P D E A SF + + + LP P + G Sbjct: 258 IIFALPPVVRLTILGINQVPEDLIEAAKSFGSSPRQLLFKVQLPLAMPTIMAGINQTLML 317 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A + +++ + + G GLG + + +G + + L+R Sbjct: 318 ALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGAGIVILAIILDRL 366 >gi|218890352|ref|YP_002439216.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|218770575|emb|CAW26340.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 274 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 109/284 (38%), Gaps = 23/284 (8%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVI-----GIINILLHGIQETTVPRDIVDIVPIT 55 + L + R P + A L+ ++ + + P I+ + + Sbjct: 6 LRLARRVSRRAWRLRVPGTWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTL-VE 64 Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L + + R+ + I V T SRR L P +++IP L + Sbjct: 65 LARGELWGHVGASLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAW 124 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + +++F K++ L A F ++ ++ + + R E+ R +RLS Sbjct: 125 VPLLLLWFGIDETPKIVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLS 176 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P ++P L + ++S W F+VA+E+I G+G ++ + Sbjct: 177 RFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET 230 Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTT 276 ++ A+L + + L D L L R + W + F E Sbjct: 231 SRPDLVIAAILVLAALGKLSDGLLRSLERRALRWRDSFDGEGGA 274 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 19/265 (7%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCVVCGVAIGIAWQSIGYIV 368 +++ R +R L S+ ++ + W A ++ + Sbjct: 7 RLARRVSRRAWRLRVPGTWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA 66 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + V ++ RV I S + + VG W+G + ++P Q L A Sbjct: 67 RGELWGHVG-------ASLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAI 119 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P+ + PL++ +L+ G + + ++AG + E+ + + Sbjct: 120 PSLAWVPLLLLWFGI----DETPKIVLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRL 175 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + + R I+LP P TG A +W + +E+ + T GLG +++ E Sbjct: 176 SRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRE 229 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 V+ +L++ + L Sbjct: 230 TSRPDLVIAAILVLAALGKLSDGLL 254 >gi|318606880|emb|CBY28378.1| L-proline glycine betaine ABC transport system permease protein ProW [Yersinia enterocolitica subsp. palearctica Y11] Length = 393 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ + +V I + A T +L+++ + Sbjct: 138 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 197 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 198 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 254 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 255 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 309 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 310 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360 Score = 91.5 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 96/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + P Sbjct: 100 PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 145 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + +T+ V+ + + Sbjct: 146 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 198 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 199 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 254 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 255 ALPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 314 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 315 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360 >gi|254247922|ref|ZP_04941243.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Burkholderia cenocepacia PC184] gi|124872698|gb|EAY64414.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Burkholderia cenocepacia PC184] Length = 291 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 105/285 (36%), Gaps = 28/285 (9%) Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGY 366 ++ + + R L + +R + M W + +A+ A Sbjct: 1 MAATLDLVKRRLADAPRSGDTRSPHSAARRRSTPMRRRAWRIASLAACIALWQAAVHWRL 60 Query: 367 IVNHFTYQDVLYVIWLG----------------CITMFRVVVLIIIASIIWIPVGIWIGF 410 + T+ +V +G ++ RV+ + A++ I +G+ IG Sbjct: 61 SLGIVTFANVPAPADVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIGR 120 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 + + P ++L PA + PL + L+ + + G + IL N + Sbjct: 121 YRALEDTLLPPLEMLRPIPAVAWIPLAILMFPSSELS----MMFITFVGALFPILLNTVH 176 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 GA A A S G + +ILPG P TG G AW + +E+ + Sbjct: 177 GAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIAGQ 236 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + G+G + ES ++P++V+G+ ++ + + + Sbjct: 237 Y------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ + P D+ + L LP + + R+L+ V + + Sbjct: 60 LSLGIVTFANVPAPADVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIG 119 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R L L+P L++++ IP + ++ ++ F +EL+ +F F ++ + Sbjct: 120 RYRALEDTLLPPLEMLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + L +RS G + + +P + P + + + M WF +V +E Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAE 231 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 MI GIG + + Q+ I+ M + + L+ R Sbjct: 232 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 >gi|170733335|ref|YP_001765282.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169816577|gb|ACA91160.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 291 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 104/285 (36%), Gaps = 28/285 (9%) Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW--FCVVCGVAIGIAWQSIGY 366 ++ + + R L + +R + M W + +A+ A Sbjct: 1 MAATLDLVKRRLADAPRSGDTRSPHSAARRRSTPMRRRAWRIASLAACIALWQAAVHWRL 60 Query: 367 IVNHFTYQDVL----------------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + T+ +V + ++ RV+ + A++ I +G+ IG Sbjct: 61 SLGIVTFANVPAPSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIGR 120 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 + + P ++L PA + PL + L+ + + G + IL N + Sbjct: 121 YRALEDTLLPPLEMLRPIPAVAWIPLAILMFPSSELS----MMFITFVGALFPILLNTVH 176 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 GA A A S G + +ILPG P TG G AW + +E+ + Sbjct: 177 GAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAEMIAGQ 236 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + G+G + ES ++P++V+G+ ++ + + + Sbjct: 237 Y------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ + P D+ + L LP + + R+L+ V + + Sbjct: 60 LSLGIVTFANVPAPSDVGPALAAFLQSPKLPMHLFASITRVLAGFVAAAVAGIGLGLAIG 119 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R L L+P L++++ IP + ++ ++ F +EL+ +F F ++ + Sbjct: 120 RYRALEDTLLPPLEMLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + L +RS G + + +P + P + + + M WF +V +E Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAE 231 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 MI GIG + + Q+ I+ M + + L+ R Sbjct: 232 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 >gi|126740290|ref|ZP_01755979.1| glycine betaine/proline ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126718745|gb|EBA15458.1| glycine betaine/proline ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 660 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 87/544 (15%), Positives = 171/544 (31%), Gaps = 54/544 (9%) Query: 12 SRRIFP--NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 +R +P A V G+I L G + + I + + A +T Sbjct: 98 GKRRWPYLGPVPWAAVAGVAGVIGYALGGWRLAA----LGAGTFIWTALIGQWKMAMQTM 153 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 + A ++ A K + VL P+L ++Q++P +L V++F G Sbjct: 154 SVLTVAAPLAFAIGLGLGIAAWKFAWVERVLKPMLSVLQTLPFFTYLLPAVIFFKV---G 210 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 GA IFAI M L + ++ E + S WQ ++ VP + Sbjct: 211 PTAGAVATVIFAIP-----PMILMTTLGLKKVSPEVIEAGKMSGCSRWQMLRHVYVPAAR 265 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 ++ + ++ +VV I +PG+G+ + + L +T++ Sbjct: 266 TEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSFEIGVTIV 318 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPL 309 + D++ W K + W+ + T F+G+ P+ Sbjct: 319 LLAVTLDRMS----KAWVVK---QPVHFEKGTPWWIRHRMVLTALGVFLGFILLAQLFPI 371 Query: 310 SNNVKK----------------------LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347 ++ + + +R+ L + +S F Sbjct: 372 LGSIGRKQHFSQGKEIDVLIKGFLALDGIRAVTEWLRWFLNVKVLIPFRDTLLSIPTPAF 431 Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 VV + + FT IT++ V+ +++A +I IP+GI Sbjct: 432 ILMVVSFSYWLGGRRPAVFAAIFFTIVAFSGWWDRSIITLYAVISAVVLAMMIGIPLGIL 491 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 S ++ FP+ ++ + + + + Y Sbjct: 492 ASRSEAWSRRVLLACDTAQTFPSFIYLIPAIMLFGVNDVAVVFSILIFATVPLTRY---- 547 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G P + E A T + + LP P G A A+ I++ Sbjct: 548 TVEGLRTVPPEMTEAADMSGSTRRQKLLSVQLPLALPTMAVGFNQAIMFAFFMVIIAAFI 607 Query: 528 SWGH 531 Sbjct: 608 GTQD 611 Score = 82.7 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 77/201 (38%), Gaps = 19/201 (9%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T ++SA+V++++ LA++S ++ D Q+ P +L ++ F Sbjct: 470 TLYAVISAVVLAMMIGIPLGILASRSEAWSRRVLLACDTAQTFPSFIYLIPAIMLFGVN- 528 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 ++A +F+I +T + L +P ++ E + + QK + +P Sbjct: 529 -------DVAVVFSILIFATVPLTRYTVEGLRTVPPEMTEAADMSGSTRRQKLLSVQLPL 581 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + ++ +F V+ + I D +G + + +L L Sbjct: 582 ALPTMAVGFNQAIMFAFFMVIIAAFIGTQD-------LGQELQRTLAGTELGKNFVLGLN 634 Query: 248 MLGVIFLYDQLLFRPMIVWSN 268 + + +D + W+ Sbjct: 635 VSLMALTFDMAI----TAWAE 651 >gi|15598644|ref|NP_252138.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107102982|ref|ZP_01366900.1| hypothetical protein PaerPA_01004051 [Pseudomonas aeruginosa PACS2] gi|254236402|ref|ZP_04929725.1| hypothetical protein PACG_02382 [Pseudomonas aeruginosa C3719] gi|254242134|ref|ZP_04935456.1| hypothetical protein PA2G_02863 [Pseudomonas aeruginosa 2192] gi|9949589|gb|AAG06836.1|AE004765_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126168333|gb|EAZ53844.1| hypothetical protein PACG_02382 [Pseudomonas aeruginosa C3719] gi|126195512|gb|EAZ59575.1| hypothetical protein PA2G_02863 [Pseudomonas aeruginosa 2192] Length = 274 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 109/284 (38%), Gaps = 23/284 (8%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVI-----GIINILLHGIQETTVPRDIVDIVPIT 55 + L + R P + A L+ ++ + + P I+ + + Sbjct: 6 LRLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTL-VE 64 Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L + + R+ + I V T SRR L P +++IP L + Sbjct: 65 LARGELWGHVGASLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAW 124 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + +++F K++ L A F ++ ++ + + R E+ R +RLS Sbjct: 125 VPLLLLWFGIDETPKIVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLS 176 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P ++P L + ++S W F+VA+E+I G+G ++ + Sbjct: 177 RFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET 230 Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTT 276 ++ A+L + + L D L L R + W + F E Sbjct: 231 SRPDLVIAAILVLAALGKLSDGLLRSLERRALRWRDSFDGEGGA 274 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 19/265 (7%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCVVCGVAIGIAWQSIGYIV 368 +++ R +R L S+ ++ + W A ++ + Sbjct: 7 RLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA 66 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + V ++ RV I S + + VG W+G + ++P Q L A Sbjct: 67 RGELWGHVG-------ASLARVAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAI 119 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P+ + PL++ +L+ G + + ++AG + E+ + + Sbjct: 120 PSLAWVPLLLLWFGI----DETPKIVLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRL 175 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + + R I+LP P TG A +W + +E+ + T GLG +++ E Sbjct: 176 SRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRE 229 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 V+ +L++ + L Sbjct: 230 TSRPDLVIAAILVLAALGKLSDGLL 254 >gi|6019466|gb|AAD31786.2|AF126201_4 AtsB [Pseudomonas putida] Length = 535 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 74/562 (13%), Positives = 179/562 (31%), Gaps = 70/562 (12%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASR 67 I R+ P + L + ++ ++ H + E +P +V + L + Sbjct: 26 ARIGTRVLP--WVLPTLIALLWVVASHQHWMSEQILPAPSVVWQSAVEFGSGELWGHLWI 83 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ +++ + + T SRR +++P + IP L ++ +++F Sbjct: 84 SVQRLFWGLLMGIASGLLLGTWLGTSRRAQTLVLPTFVALAQIPTLAWIPLFMLFFGIG- 142 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 EL + + + V +T + + L E + + RL F L +P Sbjct: 143 -------ELLKLVVMVKAVVVPVTLHTLVGVRDAQPKLREAAAALRLPRHLLFLRLLLPA 195 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + + ++++ GW ++A E++ + GIG + + L + +L Sbjct: 196 ALPAFLTGVRLALATGWTSLLAVELLASSE------GIGYLMVWGRQLFMLFMLDLVLLC 249 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS 307 +L + +G FS Sbjct: 250 ILVIGL--------------------------------------------VGALLEKGFS 265 Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 + + + + P + + V I + + Sbjct: 266 TVEKRLLYWPQPATGEQQRGPIPRGWQSLLLPTALLGLWQASSSFGWVDQNILTSPLEVL 325 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 F+ + +++ R + +++ + G+ +G P L Sbjct: 326 RTLFSGLADGSLPEAMLLSLQRTLTGLVLGGGAGLLGGLLLGLSHPAERVFGPSLSALRQ 385 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 + PL+ + ++ + + +L G ++ E A + Sbjct: 386 VALFAWVPLLTAWFGLGEG----AKTVFVALAAFFPLLIATQRGIASLSPQLGEAARTLR 441 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + W+ R ++LPG P G + AW +I +E G+ + + + Sbjct: 442 LNLWQRLRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYFM-----PSGGGIASLMIGAQ 496 Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569 + +V+ +L++ L Sbjct: 497 QLFRMDQVMAAMLLIGLVGALL 518 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 T P +++ + L SLP+ + R L+ +V+ + L S V Sbjct: 318 LTSPLEVLRTLFSGLADGSLPEAMLLSLQRTLTGLVLGGGAGLLGGLLLGLSHPAERVFG 377 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L ++ + + ++ +F K + LAA F + + + + ++ Sbjct: 378 PSLSALRQVALFAWVPLLTAWFGLGEGAKTVFVALAAFF--------PLLIATQRGIASL 429 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E +R+ RL+ WQ+ L +P + P + + +S+ W + +E + Sbjct: 430 SPQLGEAARTLRLNLWQRLRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYFMPSG---- 485 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GI S + A + + ++ AML + V L L + + + ++R Sbjct: 486 -GGIASLMIGAQQLFRMDQVMAAMLLIGLVGALLGTL-GQRLESRATRWR 533 Score = 61.9 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 88/272 (32%), Gaps = 19/272 (6%) Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 ++ + K G + + RV + ++ VA W S + Sbjct: 1 MNGTLSKGWIGPGGLLRGLFATQGRARIGTRVLPWVLPTLIALLWVVASHQHWMSEQILP 60 Query: 369 NHFTYQDVLYVIWLGC------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 G I++ R+ +++ + +G W+G + + P Sbjct: 61 APSVVWQSAVEFGSGELWGHLWISVQRLFWGLLMGIASGLLLGTWLGTSRRAQTLVLPTF 120 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 LA P + PL + L + + ++ + + G +E Sbjct: 121 VALAQIPTLAWIPLFMLFFGIGELLKLVVMVKAVVVPV----TLHTLVGVRDAQPKLREA 176 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A++ + + ++LP P ++TG A W + + E+ + + G+G Sbjct: 177 AAALRLPRHLLFLRLLLPAALPAFLTGVRLALATGWTSLLAVELLA------SSEGIGYL 230 Query: 543 IA---ESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + V+L +L++ L + Sbjct: 231 MVWGRQLFMLFMLDLVLLCILVIGLVGALLEK 262 >gi|218532106|ref|YP_002422922.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|218524409|gb|ACK84994.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 305 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 10/184 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R++ +A + IP+G+ +G + + P ++ PA + P+ + Sbjct: 113 MSCRRILYGFSLAGAVAIPLGLLMGRFRILREIVFPICEVTRPIPAIAWVPMAIML---- 168 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + G+ + IL N + G + A +R + LP P Sbjct: 169 WPTNEESIVFITFLGSFFPILINTLQGMATVDPVLVRAARCLGAGEAALFREVYLPASLP 228 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG G AW + I +E+ S G+G + E+ + ++ LG++ + Sbjct: 229 QIFTGLTVGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYSDIALGMITIGV 282 Query: 565 FVLA 568 LA Sbjct: 283 LGLA 286 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 89/252 (35%), Gaps = 21/252 (8%) Query: 22 LLAFVLVIGIINI----LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 L F+ V ++ + P D++ + + + R+L Sbjct: 64 LAVFITVWQVLTVNRATFYVRFTNVPSPADVLARAVLAFHNPIFGDHIWMSCRRILYGFS 123 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++ L + R L ++ PI ++ + IP + ++ ++ + E + Sbjct: 124 LAGAVAIPLGLLMGRFRILREIVFPICEVTRPIPAIAWVPMAIMLW--------PTNEES 175 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +F F + + + Q + + L +R F + +P S+P + + Sbjct: 176 IVFITFLGSFFPILINTLQGMATVDPVLVRAARCLGAGEAALFREVYLPASLPQIFTGLT 235 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---L 254 + M W ++A+EMI GIG + A I M+T+ + L Sbjct: 236 VGMGVAWVSLIAAEMISG------QFGIGYFTWEAYSLVQYSDIALGMITIGVLGLASSL 289 Query: 255 YDQLLFRPMIVW 266 +L+ R + W Sbjct: 290 AIRLVGRIAMPW 301 >gi|293394761|ref|ZP_06639052.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291422712|gb|EFE95950.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 393 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 96/243 (39%), Gaps = 23/243 (9%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 P+ +L F L+ ++ L G I I + A T +L+A Sbjct: 141 MPSPIAILVFSLIAWQLSSLGMGAATLVSLIAIGAIGAWS--------QAMVTLALVLTA 192 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 + ++ A+SR V+ P+LD MQ+ P +L V+ F G V G Sbjct: 193 LFFCIIIGLPLGIWLARSRHAAKVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVV 249 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + IFA+ + + +P DL E + SF S Q + + +P +MP ++ Sbjct: 250 VTIIFALP-----PIVRLTILGINQVPADLIEAAESFGSSPRQLLFKVQLPLAMPTIMAG 304 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + ++ VV + MI VG G+G + I D+ + ++ + + Sbjct: 305 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIIL 357 Query: 256 DQL 258 D+L Sbjct: 358 DRL 360 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 100/293 (34%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + + P Sbjct: 100 PLDSWV------THGIDWLVLHFRPLFQGIRVPVDFILSGFQQLLLGMPSPI-------- 145 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F ++G+ ++ ++ + +T+ V+ + I Sbjct: 146 ---AILVFSLIAWQLSSLGMGAATLVSLIAIGAIGAWSQAM----VTLALVLTALFFCII 198 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ H + I+P + PA V+ +V N+ ++ I Sbjct: 199 IGLPLGIWLARSRHAAKVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 254 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G + P D E A SF + + + LP P + G A + Sbjct: 255 ALPPIVRLTILGINQVPADLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 314 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 315 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 360 >gi|119355995|ref|YP_910639.1| binding-protein-dependent transport systems inner membrane component [Chlorobium phaeobacteroides DSM 266] gi|119353344|gb|ABL64215.1| binding-protein-dependent transport systems inner membrane component [Chlorobium phaeobacteroides DSM 266] Length = 266 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 87/228 (38%), Gaps = 10/228 (4%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 + I + G ++ + ++ F +I ++ RV+ + +A ++ + Sbjct: 35 VWQIASALKLFGADFSESFSPLAAMLALFEMIKNGELIHHALPSLRRVLTGLSLAVVVAL 94 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+G+ +G+ I Q + + P+ + ++ + L+ W Sbjct: 95 PLGVLVGYFKRIEQLTYVVFQFMRMISPLAWMPIAIIIFGVG----DVAVIFLLWLVAIW 150 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 ++ N GA + +A + R +I+P P +TG A G +W + Sbjct: 151 PLILNTSHGAGRVSPLWVNMAKTMGAKDSGILRKVIIPAAVPDMLTGLRLAVGVSWIILV 210 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 +E+ GLG +I ++ ++ + +++ ++ + L+ Sbjct: 211 PAEMLGVPD------GLGYFILDTRDRFRYDQLMATIMAIGMIGYLLD 252 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 32/241 (13%), Positives = 95/241 (39%), Gaps = 17/241 (7%) Query: 19 IFDLLAFVLVIGI---INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 + ++ F++V I + + E+ P + + + L +A + R+L+ Sbjct: 26 LLGVVLFMIVWQIASALKLFGADFSESFSPLAAMLALFEMIKNGELIHHALPSLRRVLTG 85 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 + ++++ L +R+ + + M+ I L ++ ++ F + Sbjct: 86 LSLAVVVALPLGVLVGYFKRIEQLTYVVFQFMRMISPLAWMPIAIIIFGVG--------D 137 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 +A IF ++ +W + + + ++++ + +P ++P ++ Sbjct: 138 VAVIFLLWLVAIWPLILNTSHGAGRVSPLWVNMAKTMGAKDSGILRKVIIPAAVPDMLTG 197 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + +++ W +V +EM+ V D G+G +I ++ ++ + + +L Sbjct: 198 LRLAVGVSWIILVPAEMLGVPD------GLGYFILDTRDRFRYDQLMATIMAIGMIGYLL 251 Query: 256 D 256 D Sbjct: 252 D 252 >gi|167010889|ref|ZP_02275820.1| ABC-type anion transport system, duplicated permease component [Francisella tularensis subsp. holarctica FSC200] Length = 132 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 49/130 (37%), Positives = 74/130 (56%) Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + GT WY+LFNVI+G S P + E+ SFH+ G +WW +P +FPY V G I+A GG Sbjct: 1 MTGTSWYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGG 60 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHP 576 AWN++I +E+ WG ++ G+GA ++ +T + L V+ +C V F+W P Sbjct: 61 AWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLQDAALAVVALCSLVALCIIFIWKP 120 Query: 577 LYLYGTRCLR 586 LY + Sbjct: 121 LYKLAETKYK 130 Score = 93.8 bits (232), Expect = 7e-17, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 62/126 (49%) Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 T W + F++ N+P ++ E+++SF L G + ++ +P P +V ++ + G Sbjct: 1 MTGTSWYVLFNVISGFSNLPTEIIEMTKSFHLKGLKWWFKFAIPAVFPYIVCGIISAAGG 60 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 W +A+E+++ G I + GIG+ ++ L A++ + ++ L +++P Sbjct: 61 AWNSAIAAELVIWGSNTIKVDGIGALVSTTTANNQLQDAALAVVALCSLVALCIIFIWKP 120 Query: 263 MIVWSN 268 + + Sbjct: 121 LYKLAE 126 >gi|329954688|ref|ZP_08295748.1| glycine betaine transport system permease protein opuAB [Bacteroides clarus YIT 12056] gi|328527229|gb|EGF54233.1| glycine betaine transport system permease protein opuAB [Bacteroides clarus YIT 12056] Length = 275 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L I I + + ++ + ++ + L + +T +LS+ ++L Sbjct: 41 LYGIPFYITIAVLAILAWMKSGKGTAVFTVLGLLLIYGMGFWEETMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A S R ++ PILD MQ++P +L V++F G V GA IF Sbjct: 101 LLGVPLGIWTANSNRCNKIMRPILDFMQTMPAFVYLIPAVLFFGL---GTVPGAFATVIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATPWQLLYKVQLPLALPTIMTGINQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMISAG-------GLGEVVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263 Score = 85.0 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + V +AW G FT +L + +G T+ V+ + Sbjct: 39 HVLYGIPFYITIAVLAILAWMKSGKGTAVFTVLGLLLIYGMGFWEETMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A ++ +P+GIW + ++P + PA V+ V + + Sbjct: 99 ALLLGVPLGIWTANSNRCNKIMRPILDFMQTMPAFVYLIPAVLFFGLGTVPGAFATVIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATPWQLLYKVQLPLALPTIMTGINQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + S G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMISAG-------GLGEVVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263 >gi|239986557|ref|ZP_04707221.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces roseosporus NRRL 11379] Length = 873 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 18/234 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 +L GI+ ++ ++ P ++ V L D L A T +L A +++L+ Sbjct: 49 LLFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 A++S+ + V+ P+LD MQ++P + +L V++F G V G IFA+ Sbjct: 107 PLGIWASRSKTVSAVVRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +L E + +F + + +P ++P ++ + + G Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGL 218 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265 Score = 83.4 bits (205), Expect = 1e-13, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 11/227 (4%) Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362 F PL V L + + S ++ +L + G+ IAW Sbjct: 2 FRLPLGEWVDSAVDWLQTHLVWLFDAISSIVSGMFDGIAAVLSAPAPLLFAGIVAVIAWW 61 Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G T+ + +W + T+ V+V ++ +I +P+GIW +S+ Sbjct: 62 LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSKTVSAV 121 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P + PA V+ V + + + + G Sbjct: 122 VRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + E A +F T + LP P + G + +++ Sbjct: 178 ELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224 >gi|150402370|ref|YP_001329664.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C7] gi|150033400|gb|ABR65513.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C7] Length = 253 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 14/247 (5%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-----IWLGCIT 386 ++L N + + + W + + + + +++ V + I ++ Sbjct: 1 MKLLKNLTLPVLGILAWELLAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVS 60 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + RV++ +IA IP+GI +G+ I+ + +L P + PL ++ Sbjct: 61 IERVLIGFLIAGAFAIPIGILMGYYSLINDLLDMTVELFRPIPPLAWVPLALAWFGIGES 120 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + + ++ G + IL N I+G + P E A + + + +I+P P Sbjct: 121 SMH----FIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGSTKDILKSVIVPASSPDI 176 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 +TG G AW + +E+ GLG I + VV ++I+ Sbjct: 177 LTGLRIGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSKMNVVVASMIIIGIIG 231 Query: 567 LALNRFL 573 + L++ L Sbjct: 232 IILDKGL 238 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 79/204 (38%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L + + R+L +I+ F L + +L +++ + IP L + Sbjct: 48 LGTGNLIENTIVSIERVLIGFLIAGAFAIPIGILMGYYSLINDLLDMTVELFRPIPPLAW 107 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + + +F F IF + + + + ++P + E +++ S Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGS 159 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + VP S P ++ + + W VVA+EM+ D G+G I A Sbjct: 160 TKDILKSVIVPASSPDILTGLRIGAGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYSL 214 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ +M+ + + + D+ L Sbjct: 215 SKMNVVVASMIIIGIIGIILDKGL 238 >gi|226952054|ref|ZP_03822518.1| ABC taurine transporter permease subunit [Acinetobacter sp. ATCC 27244] gi|226837211|gb|EEH69594.1| ABC taurine transporter permease subunit [Acinetobacter sp. ATCC 27244] Length = 293 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV++ ++ A I +P+G+W+G + + + P +LL P + PL+V Sbjct: 99 AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + SE+ + G+G + + + VVLG++++ Sbjct: 215 PHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 269 IVAVSFELFL 278 Score = 121 bits (304), Expect = 4e-25, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 92/211 (43%), Gaps = 14/211 (6%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 +++ +L Q+ + + R+L A+V ++ ++ + VL P++++++ Sbjct: 82 LEVSQQGFMKATLWQHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLR 141 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 IP L +L V++F E + IF S + + S + + + E Sbjct: 142 PIPPLAYLPLLVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVISHQLNRERA 193 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 + S S Q FW++ +P ++P ++ + + + GW +VASE++ GIG Sbjct: 194 ALSLGASQSQVFWHVILPTALPHILTGIRIGLGVGWSTLVASELVA------ADRGIGFM 247 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + A + ++ ++ + V ++ L Sbjct: 248 VQSAAQFLITDTVVLGIIVIAIVAVSFELFL 278 >gi|254460099|ref|ZP_05073515.1| taurine ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206676688|gb|EDZ41175.1| taurine ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 436 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 12/189 (6%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 + WQ ++ N YQ ++ ++ RV++ ++ + + +P+G +G Sbjct: 220 VVWQRFVFL-NTEGYQG-FTLLEHTRYSLQRVLIGFLLGAAVGVPIGYAMGLTGWARGWF 277 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 P + + P PL++ + +L+ W ++ +G S Sbjct: 278 DPIVEFMRPIPPLALIPLIIIWFGIG----EIGKIVLLFLAALWIMIIAARSGVSGVAIT 333 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 A S + W+ +I+P P TGA A G W + +E+ + G Sbjct: 334 KVHAAYSLGASKWQILGKVIVPNSLPDIFTGARVAMGVCWGTVVAAELVA------ANVG 387 Query: 539 LGAYIAEST 547 LG I ++ Sbjct: 388 LGKMIVTAS 396 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 14/173 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L ++ + R+L ++ + PI++ M+ IP L + Sbjct: 237 TLLEHTRYSLQRVLIGFLLGAAVGVPIGYAMGLTGWARGWFDPIVEFMRPIPPLALIPLI 296 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W M + + + + S S WQ Sbjct: 297 IIWFGIGEIGK--------IVLLFLAALWIMIIAARSGVSGVAITKVHAAYSLGASKWQI 348 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 + VP S+P + ++M W VVA+E++ G+G I A Sbjct: 349 LGKVIVPNSLPDIFTGARVAMGVCWGTVVAAELVAANV------GLGKMIVTA 395 >gi|126733424|ref|ZP_01749171.1| taurine ABC transporter, permease protein [Roseobacter sp. CCS2] gi|126716290|gb|EBA13154.1| taurine ABC transporter, permease protein [Roseobacter sp. CCS2] Length = 444 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 86/217 (39%), Gaps = 12/217 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 W +G + Y++ LG ++FRV+V ++ +++ IP+G +G Sbjct: 228 AVWSRLG-EIATVGYRNSTLAEHLGY-SLFRVIVGFLLGALVGIPLGYAMGLSNWFRGWF 285 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 P + + P PLV+ + +L+ W + +G S Sbjct: 286 DPIVEFMRPVPPLALIPLVIIWAGIGEVGK----IILLFLAALWIMAIAARSGVSGVRIS 341 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 A S + W+ R++I+P P TGA A G W + +E+ + G Sbjct: 342 KVHAAYSLGASKWQIMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVAAEK------G 395 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 G I +++ S V++G++++ +++ + Sbjct: 396 AGMMIMVASKFQSTDIVLMGIILIGIIGFSIDMLMRQ 432 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 17/225 (7%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 + +I + +L ++ + R++ ++ L S PI++ M Sbjct: 233 LGEIATVGYRNSTLAEHLGYSLFRVIVGFLLGALVGIPLGYAMGLSNWFRGWFDPIVEFM 292 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + +P L + +++ GK I +F + +W M + + + Sbjct: 293 RPVPPLALIPLVIIWAGIGEVGK--------IILLFLAALWIMAIAARSGVSGVRISKVH 344 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 + S S WQ ++ +P S+P + ++M W VVA+E++ G G Sbjct: 345 AAYSLGASKWQIMRHVIIPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGM 398 Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269 I +A K Q +L ++ + + F D L+ + ++ W K Sbjct: 399 MIMVASKFQSTDIVLMGIILIGIIGFSIDMLMRQAEKWLVPWKGK 443 >gi|291443497|ref|ZP_06582887.1| LOW QUALITY PROTEIN: glycine betaine transport system permease protein [Streptomyces roseosporus NRRL 15998] gi|291346444|gb|EFE73348.1| LOW QUALITY PROTEIN: glycine betaine transport system permease protein [Streptomyces roseosporus NRRL 15998] Length = 866 Score = 128 bits (321), Expect = 4e-27, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 18/234 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 +L GI+ ++ ++ P ++ V L D L A T +L A +++L+ Sbjct: 49 LLFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 A++S+ + V+ P+LD MQ++P + +L V++F G V G IFA+ Sbjct: 107 PLGIWASRSKTVSAVVRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +L E + +F + + +P ++P ++ + + G Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGL 218 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 11/227 (4%) Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362 F PL V L + + S ++ +L + G+ IAW Sbjct: 2 FRLPLGEWVDSAVDWLQTHLVWLFDAISSIVSGMFDGIAAVLSAPAPLLFAGIVAVIAWW 61 Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G T+ + +W + T+ V+V ++ +I +P+GIW +S+ Sbjct: 62 LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSKTVSAV 121 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P + PA V+ V + + + + G Sbjct: 122 VRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + E A +F T + LP P + G + +++ Sbjct: 178 ELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224 >gi|299529137|ref|ZP_07042585.1| glycine betaine/L-proline transportsystem permease protein proW [Comamonas testosteroni S44] gi|298722893|gb|EFI63802.1| glycine betaine/L-proline transportsystem permease protein proW [Comamonas testosteroni S44] Length = 414 Score = 128 bits (321), Expect = 4e-27, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + A T +L+++ ++ L A S R P+LD MQ+ P +L Sbjct: 183 GIWSEAMVTLALVLTSLFFCIVIGLPVGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPV 242 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V+ F G V G + +FA + + + + DL E SR++ S Q Sbjct: 243 VMLFG---IGNVPGVIVTIVFA-----LPPLIRLTNLGIRQVRPDLIEASRAYGASPAQL 294 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 W + +P +MP ++ + ++ VV + MI VG G+G + I D+ Sbjct: 295 LWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMG 347 Query: 240 AILYAMLTMLGVIFLYDQL 258 L ++ + + D++ Sbjct: 348 LATVGGLGIVLLAIVLDRI 366 Score = 88.1 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 85/279 (30%), Gaps = 30/279 (10%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 + +P+ + + L I + L + Q L I + Sbjct: 118 VVDHFRPFFQAVRTPIDATLNGVTDVLQTIPMPALVLLIALLAWQFAGRKLAIGSAVSLL 177 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 VA+ W +T+ V+ + +I +PVGI + Sbjct: 178 IVALLGIWS-------------------EAMVTLALVLTSLFFCIVIGLPVGILLASSDR 218 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 +P + PA V+ VV N+ ++ I ++ G Sbjct: 219 AQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIVFALPPLIRLTNLGIR 274 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 D E + ++ + + + LP P + G A + + +++ + + G Sbjct: 275 QVRPDLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG--- 331 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 332 ----GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 366 >gi|239940068|ref|ZP_04692005.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces roseosporus NRRL 15998] Length = 867 Score = 128 bits (321), Expect = 4e-27, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 18/234 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 +L GI+ ++ ++ P ++ V L D L A T +L A +++L+ Sbjct: 49 LLFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 A++S+ + V+ P+LD MQ++P + +L V++F G V G IFA+ Sbjct: 107 PLGIWASRSKTVSAVVRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +L E + +F + + +P ++P ++ + + G Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGL 218 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 11/227 (4%) Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362 F PL V L + + S ++ +L + G+ IAW Sbjct: 2 FRLPLGEWVDSAVDWLQTHLVWLFDAISSIVSGMFDGIAAVLSAPAPLLFAGIVAVIAWW 61 Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G T+ + +W + T+ V+V ++ +I +P+GIW +S+ Sbjct: 62 LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSKTVSAV 121 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P + PA V+ V + + + + G Sbjct: 122 VRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + E A +F T + LP P + G + +++ Sbjct: 178 ELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224 >gi|221369069|ref|YP_002520165.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] gi|221162121|gb|ACM03092.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] Length = 296 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++V+ ++ ++ + + + L + T + V +++ Sbjct: 62 IVVLAVLLAIVWAGSRSWRIVAGSAVAMCAIGWFGLWEDTMVTLAMVSVCTVAAVIIGLP 121 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 LAA+S R+ ++ P+LD+MQ++P +L VV F GKV G I+A+ Sbjct: 122 IGILAARSDRMQRLVNPVLDVMQTLPSFVYLIPVVVIFG---IGKVPGMIAVVIYAVP-- 176 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + ++ E + +F S QK W + +P ++P L+ + ++ Sbjct: 177 ---PMIRLTNLGIRLVDAEVLEAAEAFGSSARQKLWNVQLPLALPALMTGINQTIMMSLS 233 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + M+ VG G+G + AI Q ++ + ++D+ Sbjct: 234 MVVVASMVGVG-------GLGKNVLQAINNQFFTLGFMNGFALVAIAIVFDR 278 Score = 79.6 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 82/276 (29%), Gaps = 11/276 (3%) Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355 R + + V+ + + + + + + Sbjct: 14 RTLRMMRKTIDGSFRDLVRSFSDAIDTATAPLQLALNAIERAFTSTPWIVVLAVLLAIVW 73 Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 A +W+ + + +T+ V V + A II +P+GI + Sbjct: 74 AGSRSWRIVAGSAVAMCAIGWFGLWEDTMVTLAMVSVCTVAAVIIGLPIGILAARSDRMQ 133 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P ++ P+ V+ VV + + + + ++ G Sbjct: 134 RLVNPVLDVMQTLPSFVYLIPVVVIFGIGKVPGMIAVVIY----AVPPMIRLTNLGIRLV 189 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E A +F + + + LP P +TG + + +V+ + G Sbjct: 190 DAEVLEAAEAFGSSARQKLWNVQLPLALPALMTGINQTIMMSLSMVVVASMVGVG----- 244 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + + + +R Sbjct: 245 --GLGKNVLQAINNQFFTLGFMNGFALVAIAIVFDR 278 >gi|264677530|ref|YP_003277436.1| glycine betaine/L-proline transportsystem permease protein proW [Comamonas testosteroni CNB-2] gi|262208042|gb|ACY32140.1| glycine betaine/L-proline transportsystem permease protein proW [Comamonas testosteroni CNB-2] Length = 414 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + A T +L+++ ++ L A S R P+LD MQ+ P +L Sbjct: 183 GIWSEAMVTLALVLTSLFFCIVIGLPVGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPV 242 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V+ F G V G + +FA + + + + DL E SR++ S Q Sbjct: 243 VMLFG---IGNVPGVIVTIVFA-----LPPLIRLTNLGIRQVRPDLIEASRAYGASPAQL 294 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 W + +P +MP ++ + ++ VV + MI VG G+G + I D+ Sbjct: 295 LWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMG 347 Query: 240 AILYAMLTMLGVIFLYDQL 258 L ++ + + D++ Sbjct: 348 LATVGGLGIVLLAIVLDRI 366 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 85/279 (30%), Gaps = 30/279 (10%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 + +P+ + + L I + L + Q L I + Sbjct: 118 VVDHFRPFFQAVRTPIDATLNGVTDVLQTIPMPALVLLIALLAWQFAGRKLAIGSAVSLL 177 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 VA+ W +T+ V+ + +I +PVGI + Sbjct: 178 IVALLGIWS-------------------EAMVTLALVLTSLFFCIVIGLPVGILLASSDR 218 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 +P + PA V+ VV N+ ++ I ++ G Sbjct: 219 AQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIVFALPPLIRLTNLGIR 274 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 D E + ++ + + + LP P + G A + + +++ + + G Sbjct: 275 QVRPDLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG--- 331 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 332 ----GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 366 >gi|306835145|ref|ZP_07468185.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium accolens ATCC 49726] gi|304569002|gb|EFM44527.1| nitrate ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium accolens ATCC 49726] Length = 292 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 79/195 (40%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ IA +I IP+G W+G PF Q+L + PL + Sbjct: 98 IFWHMVASLRRVLIGFAIAMVIAIPLGFWLGSSATFRRATDPFVQILRPVSPLAWLPLGL 157 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + ++I W L N I +K +A++ + YI+ Sbjct: 158 ALLR----DAENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIV 213 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P P +TG + AW + +E+ G G+G ++ + +V+ Sbjct: 214 GPTALPGIITGMRQSLSTAWLVIVAAEMLVGGQ------GVGFFVWNMWNRLDIDAIVVV 267 Query: 559 VLIMCCFVLALNRFL 573 ++++ LAL+ + Sbjct: 268 IVLIGVIGLALDYLV 282 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 94/247 (38%), Gaps = 23/247 (9%) Query: 22 LLAFVLVIGIINILLHGIQETTVP-RDIVDIVPITLDV--------HSLPQYASRTTLRM 72 +AF+ + + P R V I D + + + R+ Sbjct: 50 FIAFIAIWQAVAAAGWLSDIAPTPARTWDRAVEILSDPFYRDGPASVGIFWHMVASLRRV 109 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L I+++ S P + I++ + L +L + + Sbjct: 110 LIGFAIAMVIAIPLGFWLGSSATFRRATDPFVQILRPVSPLAWLPLGLALLRD------- 162 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 AE A+F I S +W + +++ I + ++ + + Q+ Y+ P ++PG+ Sbjct: 163 -AENTAVFVIILSALWPTLLNTIEAVRGIHPTYKNLAATLGTNRMQQLLYIVGPTALPGI 221 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + M S+S W +VA+EM+V G G+G ++ D+ AI+ ++ + + Sbjct: 222 ITGMRQSLSTAWLVIVAAEMLVGGQ------GVGFFVWNMWNRLDIDAIVVVIVLIGVIG 275 Query: 253 FLYDQLL 259 D L+ Sbjct: 276 LALDYLV 282 >gi|297617500|ref|YP_003702659.1| binding-protein-dependent transporters inner membrane component [Syntrophothermus lipocalidus DSM 12680] gi|297145337|gb|ADI02094.1| binding-protein-dependent transport systems inner membrane component [Syntrophothermus lipocalidus DSM 12680] Length = 264 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 86/216 (39%), Gaps = 13/216 (6%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + Q+ +I ++++RV+ ++A+++ IP+GI + + +PF + P Sbjct: 56 VSLQEEGVLIPYTLVSLYRVLAGFLVAAVLAIPLGIVMATSRKAEAFFEPFIDFVRYLPV 115 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 PL++ + ++ GT + ++ V S P + A + G Sbjct: 116 TALIPLMILYFGIG----DFEKVAVIFVGTFFQLVLMVQDTVSTVPKELLHAAYTLGTKG 171 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + ++LP P + G AW +V+E+ + +GLG I S Sbjct: 172 RAVYTKVLLPASLPGIMDNLRICMGWAWTYLVVAELVA------ANSGLGFMILRSQRFL 225 Query: 551 SFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583 + +G+L++ + + + L L+ + R Sbjct: 226 QTDRIFVGLLVIGGLGVVTDFAFKALSKALFPWWER 261 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 98/247 (39%), Gaps = 18/247 (7%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 P + +L+ ++++G +L + P + + L Y + R+ Sbjct: 16 PRTYMMLSVIVILGAWCVLSFSGRVNPIYLPSPAAVAKAFVSLQEEGVLIPYTLVSLYRV 75 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+ +++ + + A SR+ P +D ++ +P+ + ++YF Sbjct: 76 LAGFLVAAVLAIPLGIVMATSRKAEAFFEPFIDFVRYLPVTALIPLMILYFGIG------ 129 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 + + IF + + + ++ +P++L + + G + + +P S+PG+ Sbjct: 130 --DFEKVAVIFVGTFFQLVLMVQDTVSTVPKELLHAAYTLGTKGRAVYTKVLLPASLPGI 187 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + N+ + M W ++V +E++ G+G I + + I +L + G+ Sbjct: 188 MDNLRICMGWAWTYLVVAELVAANS------GLGFMILRSQRFLQTDRIFVGLLVIGGLG 241 Query: 253 FLYDQLL 259 + D Sbjct: 242 VVTDFAF 248 >gi|163757527|ref|ZP_02164616.1| taurine ABC transporter, permease protein [Hoeflea phototrophica DFL-43] gi|162285029|gb|EDQ35311.1| taurine ABC transporter, permease protein [Hoeflea phototrophica DFL-43] Length = 422 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 4/145 (2%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV+ ++ SII IP+G +G P + + P PL++ Sbjct: 229 GYSLGRVIAGFLLGSIIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLIIIWFGI 288 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L+ W + AG S A S + W+ R++ILP Sbjct: 289 G----EEGKVILLFLAALWIMTIAARAGVSGVRISKVHAAYSLGASKWQILRHVILPNSL 344 Query: 504 PYYVTGAITACGGAWNASIVSEVAS 528 P TGA A G W + +E+ + Sbjct: 345 PEIFTGARVAMGVCWGTVVAAELVA 369 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 8/156 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL ++ + R+++ ++ + S PI++ M+ +P L + Sbjct: 223 SLWEHLGYSLGRVIAGFLLGSIIGIPLGYAMGLSNWFRGWFDPIVEFMRPVPPLALIPLI 282 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GKVI +F + +W MT + + + + S S WQ Sbjct: 283 IIWFGIGEEGKVI--------LLFLAALWIMTIAARAGVSGVRISKVHAAYSLGASKWQI 334 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ +P S+P + ++M W VVA+E++ Sbjct: 335 LRHVILPNSLPEIFTGARVAMGVCWGTVVAAELVAA 370 >gi|110677434|ref|YP_680441.1| glycine betaine transporter, permease protein [Roseobacter denitrificans OCh 114] gi|109453550|gb|ABG29755.1| glycine betaine transporter, permease protein [Roseobacter denitrificans OCh 114] Length = 659 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 79/527 (14%), Positives = 168/527 (31%), Gaps = 48/527 (9%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + A T ++ + ++ + + A KS L+P L +MQ++P +L V+ Sbjct: 144 WEIAMETMSVLVISAPLAFMIGLLVGIYAWKSPSFNRALLPFLSVMQTLPFFTYLLPAVI 203 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F AA A + M L + ++ E + + +Q Sbjct: 204 FFKVG--------PTAAAVATTVFAIPPMILMTTLGLQKVSSEVVEAGKMSGCTRFQMMR 255 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 ++ +P + ++ + ++ +VV I +PG+G+ + + + Sbjct: 256 HVYLPSARTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLQMLGSFKIGRA 308 Query: 242 LYAMLTMLGVIFLYDQLL--------------------FRPMIVWSNKFRLERTTGIYPA 281 +T++ V D+L + ++ + F L Sbjct: 309 FEIGVTIVLVAITLDRLSKAWVAKLPEHFDRGTPFYIRHKYLVAGAVGFALFFALAQLVP 368 Query: 282 DSWVLYLFRKTNFLRFIGYSSWNFFSP-LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRV 340 + + + R I + + R + + P L Sbjct: 369 ILAEVGRRQSLSQGREIDQLIKAYLALDWVKASTDAMRYVLNVWILNPFRDFLLSIPTSA 428 Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 +L + V+ G + +V + D IT++ V+ + +A II Sbjct: 429 FIILVVAAGLVIAGPRQAVLAAVFFSLVALSGWWD------RSVITLYSVIAAVSLALII 482 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 IPVGI R + ++ FP+ ++ + + + + + + Sbjct: 483 GIPVGILAARRETTARRMLLVCDTAQTFPSFIYLIPAIMLFGITATSVVMSILIFAMVPL 542 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 Y I G + P + E A T + + LP P G A A+ Sbjct: 543 VRY----TIEGLRSVPAEMMEAADMSGATKLQKLWQVQLPLALPTMAVGFNQAIMFAFFM 598 Query: 521 SIVSEVASWGH--IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 I++ L+ T GAY+ ++ G ++ M Sbjct: 599 VIIAAFIGTQDLGQELQRTLAGAYLGKNLVLGLCVSLMALTFDMIVM 645 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 93/238 (39%), Gaps = 19/238 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 AF++++ +++ G ++ + +V ++ + T +++A+ ++L+ Sbjct: 428 AFIILVVAAGLVIAGPRQAVLAAVFFSLVALS----GWWDRSVITLYSVIAAVSLALIIG 483 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 LAA+ ++ + D Q+ P +L ++ F + + +I Sbjct: 484 IPVGILAARRETTARRMLLVCDTAQTFPSFIYLIPAIMLFGI--------TATSVVMSIL 535 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + L ++P ++ E + + QK W + +P ++P + ++ Sbjct: 536 IFAMVPLVRYTIEGLRSVPAEMMEAADMSGATKLQKLWQVQLPLALPTMAVGFNQAIMFA 595 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 +F V+ + I D +G + + L L L + + +D ++ + Sbjct: 596 FFMVIIAAFIGTQD-------LGQELQRTLAGAYLGKNLVLGLCVSLMALTFDMIVMK 646 >gi|118500401|gb|ABK97399.1| MsmF [uncultured bacterium Sargasso-2222818] Length = 285 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 10/185 (5%) Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+++ IA+ I +P+G+++G+ P + L P + PL + S Sbjct: 91 RILIAFAIATGIGVPLGLFMGWSKKFRDYSFPILETLRPIPILAWVPLAILMFS----GL 146 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 + L + + N + G ++ + A + + ++++PG P+ T Sbjct: 147 ETPVIFLATLASLFVTTLNTLLGVNSIDESYFRAAKCLGASNTDVFLHVVVPGALPFIFT 206 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G + G AW + + +E+ S GLG I +S ++ +V+ +L + F Sbjct: 207 GLEISVGVAWFSLVAAEMVSGE------FGLGYMINDSYMNITYVSMVIAMLTLGFFGWI 260 Query: 569 LNRFL 573 + F+ Sbjct: 261 TSAFV 265 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 17/209 (8%) Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + R+L A I+ S++ PIL+ ++ IPIL ++ ++ F Sbjct: 84 HIYYSCRRILIAFAIATGIGVPLGLFMGWSKKFRDYSFPILETLRPIPILAWVPLAILMF 143 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 G E IF + ++ T + + +I ++ S F ++ Sbjct: 144 S--------GLETPVIFLATLASLFVTTLNTLLGVNSIDESYFRAAKCLGASNTDVFLHV 195 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 VP ++P + + +S+ WF +VA+EM+ G+G I + ++++ Sbjct: 196 VVPGALPFIFTGLEISVGVAWFSLVAAEMVSG------EFGLGYMINDSYMNITYVSMVI 249 Query: 244 AMLTMLG---VIFLYDQLLFRPMIVWSNK 269 AMLT+ + + + + M+ W K Sbjct: 250 AMLTLGFFGWITSAFVRWVGNRMMQWRVK 278 >gi|119947028|ref|YP_944708.1| ABC transporter substrate binding inner membrane protein [Psychromonas ingrahamii 37] gi|119865632|gb|ABM05109.1| ABC transporter substrate binding inner membrane protein [Psychromonas ingrahamii 37] Length = 686 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 85/556 (15%), Positives = 181/556 (32%), Gaps = 75/556 (13%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A +T +L A+ +S+ LA K++ +L P+L++ QS+P +L VV+F Sbjct: 169 AMQTLSFVLVAVPVSVFLGLTSGILAFKNKSFESILTPLLNVAQSMPHFSYLIPVVVFFG 228 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 IG AI I + M L + ++ E + Q + + Sbjct: 229 -------IGDHAGAISTIIFAT-PPMIRLTILGLKKVSPEVLEAGMMSGCNARQLMFRVL 280 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + ++ + ++ + V + I G+G + +++ ++ L Sbjct: 281 IPTARHDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGYDLLVSLNMLNIGQALEL 333 Query: 245 MLTMLGVIFLYDQLLFRPMIVWSNK-------------------------------FRLE 273 ++++ + + D+L + W+NK + + Sbjct: 334 GVSIVLIAVVLDKLS----LAWANKQSDYFAELPFHLRHKHSLAFLGILIVTSAIAYAVT 389 Query: 274 RTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQ 333 + + + +F + + + V + + P Sbjct: 390 VVFPDKANYLYFINDSQGLTTEKFWDFIVDWIITNTYDAV-QSFNFFMITSILMPMKEAY 448 Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVL 393 L + L +V G+ I ++ + + D IT + Sbjct: 449 LSMPVAATLFLVAGTGYIVGGIRSAIIVTALIAFIALTPWWD------QALITAYMTTFA 502 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 +II+ I VGI P + I FP+ V+ V+ L+ + + Sbjct: 503 VIISVTIGCSVGILCSRTPRATKVILLVCDTFQTFPSFVYLIPVIMLFGVSDLSVLIAVI 562 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 + Y + G S P +E S + + I LP FP+ + G Sbjct: 563 VYATIPATRY----TVEGLSNVPKSLQEAGSMSGVNRMQRLLKIELPLAFPHIMLGINQT 618 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF--PEVVLGVLIMCCFVLALNR 571 A I+ LG I +S + + +VLG+ + LA++ Sbjct: 619 VIFALFMVIIGAFIGTDD-------LGQLIMQSLSQANAMGQGIVLGLCV-AFIGLAVDH 670 Query: 572 FLWHPLYLYGTRCLRL 587 + + + + ++ Sbjct: 671 LI----HTWAEQRKKV 682 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 88/291 (30%), Gaps = 17/291 (5%) Query: 286 LYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLD 345 L + ++ ++ N +++L LG ++ + S + + Sbjct: 70 LDITEESTMIQEFTRGLSGVILFSINLIRELL--LGGVKTVVAFTSWEFISANEWARIPA 127 Query: 346 IFWFCVVCGVAI---GIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIW 401 + W V G + + +S+ + T ++ W + T+ V+V + ++ + Sbjct: 128 LPWPAVAAGAFLIGHYLGGRSLSILAGTSTLYIAVFGQWTPAMQTLSFVLVAVPVSVFLG 187 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 + GI S + P + + P + VV + + Sbjct: 188 LTSGILAFKNKSFESILTPLLNVAQSMPHFSYLIPVVVFFGIGDHAGAISTIIF----AT 243 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 ++ I G + E + +++P + G + Sbjct: 244 PPMIRLTILGLKKVSPEVLEAGMMSGCNARQLMFRVLIPTARHDILIGVNQVIMQCLAMA 303 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ GLG + S + + + + + + L++ Sbjct: 304 VIASFIG-------AKGLGYDLLVSLNMLNIGQALELGVSIVLIAVVLDKL 347 >gi|120610182|ref|YP_969860.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] gi|120588646|gb|ABM32086.1| binding-protein-dependent transport systems inner membrane component [Acidovorax citrulli AAC00-1] Length = 451 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 19/237 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L V V+G++ G + +V + + Q A T +L+++ L+ Sbjct: 170 TLGMVAVVGLLAWQFAGRALALGAVVSLLLVAM----LGIWQEAMVTLSLVLTSLAFCLV 225 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 L A S R +L P LD MQ+ P +L V+ F G V G + +FA Sbjct: 226 LGLPLGILLASSDRAQRLLRPALDAMQTTPAFVYLVPVVMLFG---IGNVPGVVVTIVFA 282 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + L + DL E +R++ S Q W + +P +MP ++ + ++ Sbjct: 283 -----LPPLVRLTNLGLRQVRPDLVEAARAYGASPLQMLWKVQLPLAMPSIMAGINQALM 337 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + D+L Sbjct: 338 LSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAITLDRL 387 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 87/269 (32%), Gaps = 12/269 (4%) Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363 L+ V+ +R + S L + + + Sbjct: 131 WINQGLTWTVEHFRPAFQAVRAPVDATLAGVQSVLTGLPTLGMVAVVGLLAWQFAGRALA 190 Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 +G +V+ +L + +T+ V+ + ++ +P+GI + ++P Sbjct: 191 LGAVVSLLLVA-MLGIWQEAMVTLSLVLTSLAFCLVLGLPLGILLASSDRAQRLLRPALD 249 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 + PA V+ VV N+ ++ I ++ G D E A Sbjct: 250 AMQTTPAFVYLVPVVMLFGIG----NVPGVVVTIVFALPPLVRLTNLGLRQVRPDLVEAA 305 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++ + + + LP P + G A + + +++ + + G GLG + Sbjct: 306 RAYGASPLQMLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMV 358 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +G L + + L+R Sbjct: 359 LRGIGRLDMGLATVGGLGIVLLAITLDRL 387 >gi|116051468|ref|YP_789699.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|296388035|ref|ZP_06877510.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|313108805|ref|ZP_07794791.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|115586689|gb|ABJ12704.1| putative aliphatic sulfonates ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|310881293|gb|EFQ39887.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 274 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 108/284 (38%), Gaps = 23/284 (8%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVI-----GIINILLHGIQETTVPRDIVDIVPIT 55 + L + R P + A L+ ++ + + P I+ + + Sbjct: 6 LRLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTL-VE 64 Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L + + R+ + I T SRR L P +++IP L + Sbjct: 65 LARGELWGHVGASLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAW 124 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + +++F K++ L A F ++ ++ + + R E+ R +RLS Sbjct: 125 VPLLLLWFGIDETPKIVLIALGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLS 176 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P ++P L + ++S W F+VA+E+I G+G ++ + Sbjct: 177 RFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET 230 Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTT 276 ++ A+L + + L D L L R + W + F E Sbjct: 231 SRPDLVIAAILVLAALGKLSDGLLRSLERRALRWRDSFDGEGGA 274 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 19/265 (7%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCVVCGVAIGIAWQSIGYIV 368 +++ R +R L S+ ++ + W A ++ + Sbjct: 7 RLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA 66 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + V ++ RV I S + + VG W+G + ++P Q L A Sbjct: 67 RGELWGHVG-------ASLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAI 119 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P+ + PL++ +L+ G + + ++AG + E+ + + Sbjct: 120 PSLAWVPLLLLWFGI----DETPKIVLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRL 175 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + + R I+LP P TG A +W + +E+ + T GLG +++ E Sbjct: 176 SRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRE 229 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 V+ +L++ + L Sbjct: 230 TSRPDLVIAAILVLAALGKLSDGLL 254 >gi|77465073|ref|YP_354576.1| ABC proline/glycine betaine transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126464525|ref|YP_001045638.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|332560670|ref|ZP_08414988.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides WS8N] gi|77389491|gb|ABA80675.1| ABC proline/glycine betaine transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126106336|gb|ABN78866.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|332274468|gb|EGJ19784.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides WS8N] Length = 303 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++V+ ++ ++ + + + L + T + V +++ Sbjct: 69 IVVLAVLLAIVWAGSRSWRIVAGSAVAMCAIGWFGLWEDTMVTLAMVSVCTVAAVIIGLP 128 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 LAA+S R+ ++ P+LD+MQ++P +L VV F GKV G I+A+ Sbjct: 129 IGILAARSDRMQRLVNPVLDVMQTLPSFVYLIPVVVIFG---IGKVPGMIAVVIYAVP-- 183 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + ++ E + +F S QK W + +P ++P L+ + ++ Sbjct: 184 ---PMIRLTNLGIRLVDAEVLEAAEAFGSSARQKLWNVQLPLALPALMTGVNQTIMMSLS 240 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + M+ VG G+G + AI Q ++ + ++D+ Sbjct: 241 MVVVASMVGVG-------GLGKNVLQAINNQFFTLGFMNGFALVAIAIVFDR 285 Score = 79.6 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 82/276 (29%), Gaps = 11/276 (3%) Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355 R + + V+ + + + + + + Sbjct: 21 RTLRMMRKTIDGSFRDLVRSFSDAIDTATAPLQLALNAIERAFTSTPWIVVLAVLLAIVW 80 Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 A +W+ + + +T+ V V + A II +P+GI + Sbjct: 81 AGSRSWRIVAGSAVAMCAIGWFGLWEDTMVTLAMVSVCTVAAVIIGLPIGILAARSDRMQ 140 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 + P ++ P+ V+ VV + + + + ++ G Sbjct: 141 RLVNPVLDVMQTLPSFVYLIPVVVIFGIGKVPGMIAVVIY----AVPPMIRLTNLGIRLV 196 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 + E A +F + + + LP P +TG + + +V+ + G Sbjct: 197 DAEVLEAAEAFGSSARQKLWNVQLPLALPALMTGVNQTIMMSLSMVVVASMVGVG----- 251 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + + + +R Sbjct: 252 --GLGKNVLQAINNQFFTLGFMNGFALVAIAIVFDR 285 >gi|294651139|ref|ZP_06728474.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] gi|292822971|gb|EFF81839.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] Length = 293 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV++ ++ A I +P+G+W+G + + + P +LL P + PL+V Sbjct: 99 AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + SE+ + G+G + + + VVLG++++ Sbjct: 215 PHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 269 IVAVSFELFL 278 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 92/211 (43%), Gaps = 14/211 (6%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 +++ +L Q+ + + R+L A+V ++ ++ + VL P++++++ Sbjct: 82 LEVSQQGFMKATLWQHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLR 141 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 IP L +L V++F E + IF S + + S + + + E Sbjct: 142 PIPPLAYLPLLVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVISHQLNRERA 193 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 + S S Q FW++ +P ++P ++ + + + GW +VASE++ GIG Sbjct: 194 ALSLGASQSQVFWHVILPTALPHILTGIRIGLGVGWSTLVASELVA------ADRGIGFM 247 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + A + ++ ++ + V ++ L Sbjct: 248 VQSAAQFLITDTVVLGIIVIAIVAVSFELFL 278 >gi|289623910|ref|ZP_06456864.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651131|ref|ZP_06482474.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868938|gb|EGH03647.1| taurine ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 291 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 32/313 (10%) Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 RLE DS L K + + + S + ++ L L + Sbjct: 3 RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLAALLTLWWAVTAGG 62 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +++ + +L W G WQ +G ++ R+ Sbjct: 63 WIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLG-------------------ASLQRI 103 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + + A + IP+GI IG P + P + PL+V + Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 LL+ I G A S T W+ R+++LP P +TG Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGI 219 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G W+ + +E+ + T+GLG + + + VVLG+L++ A+ Sbjct: 220 RIGLGVGWSTLVAAELIA------ATSGLGFVVQSAAQFLVTDVVVLGILVIAVIAFAME 273 Query: 571 ---RFLWHPLYLY 580 R L L + Sbjct: 274 LGLRALQRRLVPW 286 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ ++L +R + P+++ + IP L +L Sbjct: 90 ATLWQHLGASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQ 201 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFVVQSAAQFLVT 255 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287 >gi|320326464|gb|EFW82516.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331757|gb|EFW87695.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330872583|gb|EGH06732.1| taurine ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 291 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 32/313 (10%) Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 RLE DS L K + + + S + ++ L L + Sbjct: 3 RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAVTAGG 62 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +++ + +L W G WQ +G ++ R+ Sbjct: 63 WIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLG-------------------ASLQRI 103 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + + A + IP+GI IG P + P + PL+V + Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 LL+ I G A S T W+ R+++LP P +TG Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGI 219 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G W+ + +E+ + T+GLG + + + VVLG+L++ A+ Sbjct: 220 RIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273 Query: 571 ---RFLWHPLYLY 580 R L L + Sbjct: 274 LGLRALQRRLVPW 286 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ ++L +R + P+++ + IP L +L Sbjct: 90 ATLWQHLGASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQ 201 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 255 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287 >gi|20088963|ref|NP_615038.1| sulfonate ABC transporter, permease protein [Methanosarcina acetivorans C2A] gi|19913811|gb|AAM03518.1| sulfonate ABC transporter, permease protein [Methanosarcina acetivorans C2A] Length = 262 Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 72/191 (37%), Gaps = 10/191 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ + I A I+ IP+GI +G+ ++ + P ++L P + P + Sbjct: 64 LTSLLHFSIGIAAAFILGIPLGIAMGWFKAVNRAVDPIIEILRPIPPLAWIPFAIVWFGL 123 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGI 502 H ++ G + I+ N G P + E A T R++ +P Sbjct: 124 TH----QAAGFVVFVGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRFVAIPSA 179 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P G A G W + +E+ + GLG I + V++ +L++ Sbjct: 180 MPSIAAGIRIAMGVGWMCLVAAEMFG-----VSNRGLGYQIWHNYYLHRMDFVLVYMLLL 234 Query: 563 CCFVLALNRFL 573 L ++RF Sbjct: 235 GFIGLLIDRFF 245 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 79/196 (40%), Gaps = 14/196 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + L + + + + + + PI++I++ IP L ++ F +V+F Sbjct: 63 TLTSLLHFSIGIAAAFILGIPLGIAMGWFKAVNRAVDPIIEILRPIPPLAWIPFAIVWFG 122 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYL 183 AA F +F ++ + + Y N+PR E ++ + ++ Sbjct: 123 L--------THQAAGFVVFVGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRFV 174 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P +MP + + ++M GW +VA+EM V + G+G I + +L Sbjct: 175 AIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSNR-----GLGYQIWHNYYLHRMDFVLV 229 Query: 244 AMLTMLGVIFLYDQLL 259 ML + + L D+ Sbjct: 230 YMLLLGFIGLLIDRFF 245 >gi|297161909|gb|ADI11621.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces bingchenggensis BCW-1] Length = 874 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI+ +L ++ VP + +D A T +L A I+++ Sbjct: 49 LLLAGILAVLAWWLRGL-VPAVLAFAGFALIDSIEQWDEAMETLSLVLVAGAITIVLAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+++R + +L P+LD MQ++P +L + +F G V G +FA+ Sbjct: 108 LGIWASRNRAVSALLRPVLDFMQTMPAFVYLIPGIFFFGV---GVVPGVIATIVFAMPPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F + + + +P ++P ++ + ++ Sbjct: 165 -----VRMTELGIRQVDAELVEAADAFGTTPRRTLLRVQLPLALPTIMAGVNQAIMLALS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ + ++ + D++ Sbjct: 220 MVVIAGMVGGGGLGSSVF-------EAISSVDVALGFEGGIAVVILAMYLDRM 265 Score = 85.4 bits (210), Expect = 3e-14, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 9/180 (5%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----GCITMFRVVVLIIIASIIWIPV 404 ++ G+ +AW G + + + + T+ V+V I ++ +P+ Sbjct: 49 LLLAGILAVLAWWLRGLVPAVLAFAGFALIDSIEQWDEAMETLSLVLVAGAITIVLAVPL 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW +S+ ++P + PA V+ + + + + Sbjct: 109 GIWASRNRAVSALLRPVLDFMQTMPAFVYLIPGIFFFGVGVVPGVIATIVF----AMPPG 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F T R + LP P + G A A + +++ Sbjct: 165 VRMTELGIRQVDAELVEAADAFGTTPRRTLLRVQLPLALPTIMAGVNQAIMLALSMVVIA 224 >gi|25027925|ref|NP_737979.1| putative nitrate transport permease protein [Corynebacterium efficiens YS-314] gi|23493208|dbj|BAC18179.1| putative nitrate transport permease protein [Corynebacterium efficiens YS-314] Length = 261 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 79/200 (39%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + W ++ RV+ +IA++I IP+G +G + + P Q+L + Sbjct: 62 PGSVGIFWHLLTSLRRVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAW 121 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ ++ + L+ +++ W IL N I + ++ + W Sbjct: 122 LPIGLALL----LDAERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLA 177 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + LP P +T + +W IV+E+ G G+G ++ + Sbjct: 178 ISRVWLPATLPGIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDID 231 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +V+ ++++ L L+ + Sbjct: 232 AIVVAIVLIGLTGLILDHLI 251 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 88/197 (44%), Gaps = 14/197 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R+L +I+ + L + + L L P++ I++ + L +L + Sbjct: 69 WHLLTSLRRVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAWLPIGLAL 128 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 ++ AE A+F I S +W + + ++ +I +++ + W Sbjct: 129 LLD--------AERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLAISR 180 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++PG++ + +S+S W ++ +EM+V G GIG ++ D+ AI+ Sbjct: 181 VWLPATLPGIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDIDAIV 234 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + + D L+ Sbjct: 235 VAIVLIGLTGLILDHLI 251 >gi|297570467|ref|YP_003691811.1| binding-protein-dependent transport systems inner membrane component [Desulfurivibrio alkaliphilus AHT2] gi|296926382|gb|ADH87192.1| binding-protein-dependent transport systems inner membrane component [Desulfurivibrio alkaliphilus AHT2] Length = 263 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 24/253 (9%) Query: 335 CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--------- 385 ++R + FW ++ + + W+ + + + + LG + Sbjct: 6 PHSRRPDLAGERFWSPLLAVLVFLLLWEVAARLYANPYLLPGPWQVGLGLVEVWRSGKLF 65 Query: 386 -----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +++R ++A ++ +P+G+ +G+ + + P QLL +FPL V Sbjct: 66 EHIAVSLYRFGAAYLLAVVLAVPLGLVLGWFTRLHRALDPLIQLLRPISPVAWFPLAVLW 125 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L + + F IL + IA + + +VA +F + W +++P Sbjct: 126 FKIGDLPAIFIIFIASFF----PILLSTIAAVRNVESTYLKVALNFGSSKWSLLHKVVIP 181 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 FPY + G A G W + E+ +GLG +I ++ V++G+L Sbjct: 182 AAFPYIMVGLHIALGVGWIHLVAGEMLG------AQSGLGYFILDARNFLRTDLVIVGML 235 Query: 561 IMCCFVLALNRFL 573 ++ L L+R + Sbjct: 236 LVGALGLLLDRLM 248 Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 105/256 (41%), Gaps = 14/256 (5%) Query: 4 YNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQ 63 ++ P R + + +L F+L+ + L P + + L + Sbjct: 7 HSRRPDLAGERFWSPLLAVLVFLLLWEVAARLYANPYLLPGPWQVGLGLVEVWRSGKLFE 66 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + + R +A +++++ + RL L P++ +++ I + + V++F Sbjct: 67 HIAVSLYRFGAAYLLAVVLAVPLGLVLGWFTRLHRALDPLIQLLRPISPVAWFPLAVLWF 126 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 +L AIF IF + + + S ++ N+ +V+ +F S W + Sbjct: 127 KIG--------DLPAIFIIFIASFFPILLSTIAAVRNVESTYLKVALNFGSSKWSLLHKV 178 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P + P ++ + +++ GW +VA EM+ G+G +I A ++ Sbjct: 179 VIPAAFPYIMVGLHIALGVGWIHLVAGEMLG------AQSGLGYFILDARNFLRTDLVIV 232 Query: 244 AMLTMLGVIFLYDQLL 259 ML + + L D+L+ Sbjct: 233 GMLLVGALGLLLDRLM 248 >gi|270265364|ref|ZP_06193625.1| transporter [Serratia odorifera 4Rx13] gi|270040768|gb|EFA13871.1| transporter [Serratia odorifera 4Rx13] Length = 375 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q ++ +V I + A T +L+A+ + Sbjct: 120 LLGMPAPIAILVFSLIAWQISSFSMGAATLVSLIAIGAIGAWSQAMVTLALVLTALFFCI 179 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S+ ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 180 VIGLPLGIWLARSKHAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 236 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 237 A-----LPPIVRLTILGIKQVPEDLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTL 291 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 292 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 342 Score = 91.9 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L + V IAWQ + + T ++ + +G +T+ V+ + Sbjct: 119 LLLGMPAPIAILVFSLIAWQISSFSMGAATLVSLIAIGAIGAWSQAMVTLALVLTALFFC 178 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ H + I+P + PA V+ +V N+ ++ I Sbjct: 179 IVIGLPLGIWLARSKHAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 234 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G P D E A SF + + + LP P + G A Sbjct: 235 IFALPPIVRLTILGIKQVPEDLIEAAESFGSSPRQLLFKVQLPLAMPTIMAGVNQTLMLA 294 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 295 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 342 >gi|146312799|ref|YP_001177873.1| glycine betaine transporter membrane protein [Enterobacter sp. 638] gi|145319675|gb|ABP61822.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] Length = 355 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q + I ++ + + A T +L+A+ + Sbjct: 102 LLGMPAPVAIMLFALIAWQFGSAGMGIATLISLVAIGAIGAWSQAMVTLALVLTALFFCI 161 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 162 IIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 219 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 273 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324 Score = 91.1 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 11/191 (5%) Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 +T+ V+ + II +P+GIW+ P + I+P + PA V+ +V Sbjct: 145 QAMVTLALVLTALFFCIIIGLPMGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLF 204 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 N+ ++ I I+ I G + P D E + SF + + + LP Sbjct: 205 GIG----NVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPL 260 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P + G A + +++ + + G GLG + + +G + Sbjct: 261 AMPTIMAGVNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVG 313 Query: 562 MCCFVLALNRF 572 + + L+R Sbjct: 314 IVILAIILDRL 324 >gi|332638601|ref|ZP_08417464.1| ABC-type proline/glycine betaine transport system, permease component [Weissella cibaria KACC 11862] Length = 572 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 15/176 (8%) Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 AK + ++ P+LD MQ++P +L V +F G V G + IFA Sbjct: 111 GVPLGIWMAKKETVAKIVQPVLDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA- 166 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +P+DL E + S+ + QK + L +P + ++ + ++ Sbjct: 167 ----LPPTVRMSNLGIRQVPKDLVEAADSYGSTPKQKLFKLELPLATGTILAGINQTIML 222 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ D+ L ++ + + D+ Sbjct: 223 ALSMVVIASMI-------GAPGLGRGVLSAVQNADIGKGFVNGLALVILAIIIDRF 271 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 16/230 (6%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF-----RVVVLIIIASIIWI 402 W ++ I + FT+ +L++ + VVV +++ +I + Sbjct: 53 WAVIIGVTIFAILSSGKKWGFAAFTFLGLLFIANQNLWSDLMNTLTLVVVSSLVSIVIGV 112 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + ++ +QP + P V+ V+ + + Sbjct: 113 PLGIWMAKKETVAKIVQPVLDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G P D E A S+ T + + LP + G A + + Sbjct: 169 PTVRMSNLGIRQVPKDLVEAADSYGSTPKQKLFKLELPLATGTILAGINQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++ + GLG + + + + + L + + ++RF Sbjct: 229 IASMIG-------APGLGRGVLSAVQNADIGKGFVNGLALVILAIIIDRF 271 >gi|330891653|gb|EGH24314.1| taurine ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 291 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 32/313 (10%) Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 RLE DS L K + + + S + ++ L L + Sbjct: 3 RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAVTAGG 62 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +++ + +L W G WQ +G ++ R+ Sbjct: 63 WIKPLFLPPPADVLSKGWLLATKGYMDATLWQHLG-------------------ASLQRI 103 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + + A + IP+GI IG P + P + PL+V + Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 LL+ I G A S T W+ R+++LP P +TG Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGI 219 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G W+ + +E+ + T+GLG + + + VVLG+L++ A+ Sbjct: 220 RIGLGVGWSTLVGAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273 Query: 571 ---RFLWHPLYLY 580 R L L + Sbjct: 274 LGLRALQRRLVPW 286 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 85/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ ++L +R + P+++ + IP L +L Sbjct: 90 ATLWQHLGASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQ 201 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +V +E+I G+G + A + Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVGAELIA------ATSGLGFMVQSAAQFLVT 255 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287 >gi|125717254|ref|YP_001034387.1| glycine/betaine ABC transporter permease [Streptococcus sanguinis SK36] gi|125497171|gb|ABN43837.1| ABC transporter, glycine-betaine/proline permease protein, putative [Streptococcus sanguinis SK36] Length = 574 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T ++ + IS++ AKS R+ V+ P+LD MQ++P +L Sbjct: 87 QGLWENLMNTVTLVIVSSAISIIIGIPLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIP 146 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + ++ I +L E S SF +G Q Sbjct: 147 AVAFFG---IGMVPGVFASVIFALPPTVRF-----TNLAIRQISTELIEASDSFGGTGKQ 198 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + A++ D+ Sbjct: 199 KLFKVELPLAKNTILAGVNQTIMLALSMVVTASMI-------GAPGLGRGVLSALQHADI 251 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+L Sbjct: 252 GSGFVNGVSLVILAIIIDRL 271 Score = 73.8 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 11/170 (6%) Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ + + I+P + PA V+ V+ + + Sbjct: 113 PLGIWMAKSNRVEAVIKPLLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF----ALP 168 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + + E + SF TG + + LP + G A + + Sbjct: 169 PTVRFTNLAIRQISTELIEASDSFGGTGKQKLFKVELPLAKNTILAGVNQTIMLALSMVV 228 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + + + + ++R Sbjct: 229 TASMIG-------APGLGRGVLSALQHADIGSGFVNGVSLVILAIIIDRL 271 >gi|323976150|gb|EGB71243.1| inner membrane transport system [Escherichia coli TW10509] Length = 275 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRTQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIASIAFLLELGLRALQRRLTPW 270 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L PI+++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRTQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIASIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|29347160|ref|NP_810663.1| glycine betaine/L-proline transport system permease [Bacteroides thetaiotaomicron VPI-5482] gi|253571897|ref|ZP_04849302.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 1_1_6] gi|298387517|ref|ZP_06997069.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 1_1_14] gi|29339059|gb|AAO76857.1| glycine betaine/L-proline transport system permease [Bacteroides thetaiotaomicron VPI-5482] gi|251838494|gb|EES66580.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 1_1_6] gi|298259724|gb|EFI02596.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 1_1_14] Length = 276 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L I I + ++ + ++ + L + +T +LS+ ++L Sbjct: 41 LFGIPFYITIAVLAALAWFKSGKGTAVFTLLGLLLIYGMGFWEETMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A S R ++ P+LD MQ++P +L V++F G V GA IF Sbjct: 101 LLGVPLGIWTANSDRCNKIMRPVLDFMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATPWQLLYKVQLPLALPTILTGINQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMISAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + V +AW G FT +L + +G T+ V+ + Sbjct: 39 HVLFGIPFYITIAVLAALAWFKSGKGTAVFTLLGLLLIYGMGFWEETMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A ++ +P+GIW + ++P + PA V+ V + + Sbjct: 99 ALLLGVPLGIWTANSDRCNKIMRPVLDFMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATPWQLLYKVQLPLALPTILTGINQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + S G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMISAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIVLDRI 263 >gi|148545502|ref|YP_001265604.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] gi|148509560|gb|ABQ76420.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida F1] Length = 279 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ + ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 85 GASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGI 144 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ LL+ I G A S + + R++ILP Sbjct: 145 GELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGASKAQLIRHVILPSAL 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 201 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIA 254 Query: 564 CFVLALN---RFLWHPLYLY 580 AL R L L + Sbjct: 255 LIAFALEMSLRALQRKLVPW 274 Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + R+ A+V + L +R +L P+++ + IP L +L Sbjct: 78 ASLWQHLGASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPL 137 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ EL+ + I+ + + + + + ++S S Q Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGASKAQ 189 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 190 LIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 244 DVVVLGILLIALIAFALEMSLRALQRKLVPWH 275 >gi|294679156|ref|YP_003579766.1| glycine betaine/L-proline ABC transporter permease ProW-2 [Rhodobacter capsulatus SB 1003] gi|294477972|gb|ADE87359.1| glycine betaine/L-proline ABC transporter, permease protein ProW-2 [Rhodobacter capsulatus SB 1003] Length = 303 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 L Q T + +++++ AA+S RL ++ P+LD+MQ++P +L Sbjct: 101 WVGLWQDTMVTLAMVSFCTLVAVVIGLPIGIAAARSDRLQRLVSPVLDVMQTLPSFVYLI 160 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 VV F GKV G I+A+ M + + R++ E + +F S Sbjct: 161 PVVVIFG---IGKVPGMIAVVIYAVP-----PMIRLTTLGIRLVDREVTEAAEAFGSSAR 212 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 QK W + +P ++P ++ + ++ VV + M+ VG G+G + AI Q Sbjct: 213 QKLWNVQLPLALPTIMTGVNQTIMMSLSMVVVASMVGVG-------GLGKNVLQAINNQF 265 Query: 238 LLAILYAMLTMLGVIFLYDQ 257 ++ + ++D+ Sbjct: 266 FTVGFLNGFALVAIAIVFDR 285 Score = 79.6 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 70/211 (33%), Gaps = 11/211 (5%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 W+ + + + +T+ V ++A +I +P+GI + + P Sbjct: 86 WKIVLGTAVALCLIGWVGLWQDTMVTLAMVSFCTLVAVVIGLPIGIAAARSDRLQRLVSP 145 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 ++ P+ V+ VV + + + + ++ G + Sbjct: 146 VLDVMQTLPSFVYLIPVVVIFGIGKVPGMIAVVIY----AVPPMIRLTTLGIRLVDREVT 201 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 E A +F + + + LP P +TG + + +V+ + G GLG Sbjct: 202 EAAEAFGSSARQKLWNVQLPLALPTIMTGVNQTIMMSLSMVVVASMVGVG-------GLG 254 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + ++ F L + + +R Sbjct: 255 KNVLQAINNQFFTVGFLNGFALVAIAIVFDR 285 >gi|301058810|ref|ZP_07199796.1| ABC transporter, permease protein [delta proteobacterium NaphS2] gi|300447095|gb|EFK10874.1| ABC transporter, permease protein [delta proteobacterium NaphS2] Length = 278 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 93/255 (36%), Gaps = 26/255 (10%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD-----VLYVIWLGCITMFRVVVLI 394 V +L + W + + + +V + + + +++ RV++ Sbjct: 14 VPVLLILIWIYAAWNIGNQVILPKVDSVVALLLHPTENLISMGSLSSNVAVSLVRVIMGY 73 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL-------- 446 ++A+ + IP+GI +G+ + F L P + PLV++ + Sbjct: 74 LLAAALGIPLGILMGYYGLAFRLMNTFLNLFRPIPPLAWVPLVMAWFGIASMATALGLET 133 Query: 447 --------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N + ++ G + IL + I G + A + ++ +R ++ Sbjct: 134 GRLYVYLNNLKFSMIFIIFIGGFYPILSSSIHGVMNVNRTLVDSARVLGASEYQVFRKVL 193 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P P + G G +W + +E+ +G+G I + S V+ G Sbjct: 194 IPAAMPSIINGLRIGLGISWMCLVSAEMLPG-----SISGVGYLITHAYTLASTDIVIAG 248 Query: 559 VLIMCCFVLALNRFL 573 ++ + A++R Sbjct: 249 MVSIGLVGAAMDRVF 263 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 88/224 (39%), Gaps = 17/224 (7%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 ++ + + SL + + +R++ +++ L ++ L++ Sbjct: 45 LLHPTENLISMGSLSSNVAVSLVRVIMGYLLAAALGIPLGILMGYYGLAFRLMNTFLNLF 104 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAE------------LAAIFAIFTSQVWNMTFSMY 155 + IP L ++ + +F +G E + IF IF + + S Sbjct: 105 RPIPPLAWVPLVMAWFGIASMATALGLETGRLYVYLNNLKFSMIFIIFIGGFYPILSSSI 164 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + N+ R L + +R S +Q F + +P +MP ++ + + + W +V++EM+ Sbjct: 165 HGVMNVNRTLVDSARVLGASEYQVFRKVLIPAAMPSIINGLRIGLGISWMCLVSAEMLPG 224 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + G+G I A ++ M+++ V D++ Sbjct: 225 -----SISGVGYLITHAYTLASTDIVIAGMVSIGLVGAAMDRVF 263 >gi|206560415|ref|YP_002231179.1| binding-protein-dependent transport system inner membrane protein [Burkholderia cenocepacia J2315] gi|198036456|emb|CAR52352.1| binding-protein-dependent transport system inner membrane protein [Burkholderia cenocepacia J2315] Length = 291 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 88/234 (37%), Gaps = 10/234 (4%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401 + + W + V ++ + ++ RV+ + A+ Sbjct: 52 WQAAVHWRLSLGIVTFANVPAPADVGPALASFLQSPKLPMHLFASITRVLAGFVAAAFAG 111 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 I +G+ IG + + P ++L PA + PL + L+ + + G Sbjct: 112 IGLGLAIGRYRALEDTLLPPLEMLRPIPAVAWIPLAILMFPSSELS----MMFITFVGAL 167 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + IL N + GA A A S G + +ILPG P TG G AW Sbjct: 168 FPILLNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCL 227 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + +E+ + + G+G + ES ++P++V+G+ ++ + + + Sbjct: 228 VTAEMIAGQY------GIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 88/230 (38%), Gaps = 14/230 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ + P D+ + L LP + + R+L+ V + Sbjct: 60 LSLGIVTFANVPAPADVGPALASFLQSPKLPMHLFASITRVLAGFVAAAFAGIGLGLAIG 119 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R L L+P L++++ IP + ++ ++ F +EL+ +F F ++ + Sbjct: 120 RYRALEDTLLPPLEMLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + L +RS G + + +P + P + + + M WF +V +E Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGLALYAEVILPGAAPSIFTGLSIGMGTAWFCLVTAE 231 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 MI GIG + + Q+ I+ M + + L+ R Sbjct: 232 MIAG------QYGIGYFTWESYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 >gi|259506319|ref|ZP_05749221.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] gi|259166099|gb|EEW50653.1| nitrate ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] Length = 257 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 79/200 (39%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + + W ++ RV+ +IA++I IP+G +G + + P Q+L + Sbjct: 58 PGSVGIFWHLLTSLRRVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAW 117 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ ++ + L+ +++ W IL N I + ++ + W Sbjct: 118 LPIGLALL----LDAERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLA 173 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + LP P +T + +W IV+E+ G G+G ++ + Sbjct: 174 ISRVWLPATLPGIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDID 227 Query: 554 EVVLGVLIMCCFVLALNRFL 573 +V+ ++++ L L+ + Sbjct: 228 AIVVAIVLIGLTGLILDHLI 247 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 88/197 (44%), Gaps = 14/197 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R+L +I+ + L + + L L P++ I++ + L +L + Sbjct: 65 WHLLTSLRRVLFGFLIAAVIAIPLGFLLGRVKVLRWALDPLIQILRPVSPLAWLPIGLAL 124 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 ++ AE A+F I S +W + + ++ +I +++ + W Sbjct: 125 LLD--------AERTAVFVIVLSALWPILINTIDAVLHIHPTYLKLTYTLGTPLWLAISR 176 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++PG++ + +S+S W ++ +EM+V G GIG ++ D+ AI+ Sbjct: 177 VWLPATLPGIITALRLSLSTSWLVIIVAEMLVGGQ------GIGFFVWNMWNRLDIDAIV 230 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + + D L+ Sbjct: 231 VAIVLIGLTGLILDHLI 247 >gi|292489868|ref|YP_003532758.1| Taurine transport permease tauC [Erwinia amylovora CFBP1430] gi|292900910|ref|YP_003540279.1| taurine ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200758|emb|CBJ47891.1| taurine ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291555305|emb|CBA23627.1| Taurine transport permease protein tauC [Erwinia amylovora CFBP1430] gi|312174051|emb|CBX82304.1| Taurine transport permease protein tauC [Erwinia amylovora ATCC BAA-2158] Length = 275 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 100/272 (36%), Gaps = 21/272 (7%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-------AWQSIGYIVNHF 371 +P + S + +L ++W + + W + I + Sbjct: 10 ARRKWPPRWPLSRQLTLSLATLLILLAVWWAVTRLQLIAPLFLPAPQQVWHQLLTIASPI 69 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + D + ++ R+V+ ++ A +I +P+GI +G + + P +L P Sbjct: 70 GFMD-ATLWQHLAASLTRMVIALLAAVVIGVPIGILMGLNDTLRGILDPLIELYRPVPPL 128 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + PL+V + LL+ + + +AG + A S + W Sbjct: 129 AYLPLMVIWFGIGETSK----ILLIYLAIFAPVTMSALAGVKSARQVRLRAARSLGASRW 184 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + +++LPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 185 QVLWFVVLPGALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLA 238 Query: 552 FPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ + AL R L L + Sbjct: 239 TDVVLAGIATIALIAFALELGLRALQRRLTPW 270 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 105/249 (42%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I L + + + PI +L Q+ + + RM+ A++ +++ Sbjct: 37 VWWAVTRLQLIAPLFLPAPQQVWHQLLTIASPIGFMDATLWQHLAASLTRMVIALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 L + L +L P++++ + +P L +L V++F E + I Sbjct: 97 IGVPIGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + +T S + + + +RS S WQ W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVTMSALAGVKSARQVRLRAARSLGASRWQVLWFVVLPGALPEILTGIRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + T+ + F + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIATIALIAFALELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|188535297|ref|YP_001909094.1| taurine transporter subunit [Erwinia tasmaniensis Et1/99] gi|188030339|emb|CAO98228.1| Taurine transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 275 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 14/224 (6%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W + I + + D + ++ R+V+ ++ A +I +PVGI +G + + Sbjct: 58 VWHQLLTIASPTGFMD-ATLWQHLAASLTRIVIALLAAVVIGVPVGILMGLNATLRGILD 116 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P +L P + PL+V + LL+ + + +AG + Sbjct: 117 PLIELYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVR 172 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 A S + W+ +++LPG P +TG G W+ + +E+ + T GL Sbjct: 173 LRAARSLGASRWQVLWFVVLPGALPEILTGVRIGLGVGWSTLVAAELIA------ATRGL 226 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 G + + E + V+ G+ ++ AL R L L + Sbjct: 227 GFMVQSAGEFLATDVVLAGITVIALIAFALELALRALQRRLTPW 270 Score = 111 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 100/242 (41%), Gaps = 17/242 (7%) Query: 29 IGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT 88 + +I L + + + P +L Q+ + + R++ A++ +++ Sbjct: 44 LQLIAPLFLPAPQQVWHQLLTIASPTGFMDATLWQHLAASLTRIVIALLAAVVIGVPVGI 103 Query: 89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVW 148 L + L +L P++++ + +P L +L V++F E + I I+ + Sbjct: 104 LMGLNATLRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILLIYLAIFA 155 Query: 149 NMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 + S + + + +RS S WQ W++ +P ++P ++ + + + GW +V Sbjct: 156 PVAMSALAGVKSAQQVRLRAARSLGASRWQVLWFVVLPGALPEILTGVRIGLGVGWSTLV 215 Query: 209 ASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIV 265 A+E+I G+G + A + +L + + + F + + L R + Sbjct: 216 AAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIALIAFALELALRALQRRLTP 269 Query: 266 WS 267 W Sbjct: 270 WH 271 >gi|325290616|ref|YP_004266797.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324966017|gb|ADY56796.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 259 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 101/244 (41%), Gaps = 14/244 (5%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 ++I P I + +V I ++ + P ++ + ++ + LR+ Sbjct: 16 QKIIPFILAIAFIFIVWQIGAMISNNATLLPGPTVVMKTFLEFIVSGEAIEHTVASLLRI 75 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 + A V+S + + L +L P++++++ I L ++ V++F GK Sbjct: 76 VLAWVLSAFIAIPIGVIMGRIALLEKLLHPVIELIRPISPLAWIPLAVLWFGIGLSGK-- 133 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 +F I + ++ + + + + L + +SF S + + +P +MP + Sbjct: 134 ------VFVIVIASLFPILLNTISGIKGVNPILLKAGQSFGFSQLRITTRICLPAAMPTI 187 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 V + +S W ++A+EM+ G+G I ++ ++ M+ + V Sbjct: 188 VTGLRISFGSAWMAIIAAEMVA------SRSGLGYMINDGMEILRPDIVIMGMVIIGVVG 241 Query: 253 FLYD 256 FL+D Sbjct: 242 FLFD 245 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 16/242 (6%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVL 393 + ++L I + +V + I+ + + L I G ++ R+V+ Sbjct: 19 IPFILAIAFIFIVWQIGAMISNNATLLPGPTVVMKTFLEFIVSGEAIEHTVASLLRIVLA 78 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 ++++ I IP+G+ +G + + P +L+ + PL V Sbjct: 79 WVLSAFIAIPIGVIMGRIALLEKLLHPVIELIRPISPLAWIPLAVLWFGIGLSGK----V 134 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 +++ + + IL N I+G + SF + R I LP P VTG + Sbjct: 135 FVIVIASLFPILLNTISGIKGVNPILLKAGQSFGFSQLRITTRICLPAAMPTIVTGLRIS 194 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G AW A I +E+ + +GLG I + E V++G++I+ + Sbjct: 195 FGSAWMAIIAAEMVA------SRSGLGYMINDGMEILRPDIVIMGMVIIGVVGFLFDAVF 248 Query: 574 WH 575 H Sbjct: 249 RH 250 >gi|42524163|ref|NP_969543.1| ABC transporter permease [Bdellovibrio bacteriovorus HD100] gi|39576371|emb|CAE80536.1| ABC transporter , permease component [Bdellovibrio bacteriovorus HD100] Length = 275 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 10/202 (4%) Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + +I + +RV + +I + +P+G+ +G I + P Q+L Sbjct: 66 SKLAWYFSGELIRDLWESFYRVFLGFVIGGGLALPLGLLMGASQRIYDYMNPLIQVLRPI 125 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P + PL + N L+ G + +L N I G A + + + Sbjct: 126 PPIAYIPLAILWFGLG----NPPAVFLIALGAFFPVLMNTIVGVRAVDSIYIRAGKNLGA 181 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + +R II+P PY ++G G + IV+E+ + GLG I E+ E Sbjct: 182 GSFLMFRKIIVPAAMPYILSGVRIGIGTGFICMIVAEMIA------VNNGLGYRILEARE 235 Query: 549 KGSFPEVVLGVLIMCCFVLALN 570 +++ G+ + LA++ Sbjct: 236 YFWSDKIIAGMFSIGLLGLAID 257 Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 82/212 (38%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ VI L S+R+ + P++ +++ IP + ++ Sbjct: 74 GELIRDLWESFYRVFLGFVIGGGLALPLGLLMGASQRIYDYMNPLIQVLRPIPPIAYIPL 133 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P A+F I + + + + + ++ + Sbjct: 134 AILWFGLGNPP--------AVFLIALGAFFPVLMNTIVGVRAVDSIYIRAGKNLGAGSFL 185 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + VP +MP ++ + + + G+ ++ +EMI V + G+G I A + Sbjct: 186 MFRKIIVPAAMPYILSGVRIGIGTGFICMIVAEMIAVNN------GLGYRILEAREYFWS 239 Query: 239 LAILYAMLTMLGVIFLYDQLLFR---PMIVWS 267 I+ M ++ + D ++ R ++ W Sbjct: 240 DKIIAGMFSIGLLGLAIDTVVSRLNNYLLRWH 271 >gi|13473801|ref|NP_105369.1| taurine transport system permease protein [Mesorhizobium loti MAFF303099] gi|14024552|dbj|BAB51155.1| taurine transport system permease protein [Mesorhizobium loti MAFF303099] Length = 286 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 23/274 (8%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 + + P + S + +S + + A + + ++ VI Sbjct: 22 VPWSRPGPKRKGVSARMISAVTILVVLAAWALSARLQLVSPVFLPSPVAVWNKLIVVISD 81 Query: 383 GCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 G + ++ RV ++ A +I +PVG+ IG P + L P Sbjct: 82 GFVDATLLQHTVASLGRVFAALVAALLIGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLA 141 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + PLV+ + L +++ M+ + + +G + A S T + Sbjct: 142 YLPLVIIWFGIGEPSKILVIAIAMLA----PVALSTASGVRGVSQERINAARSLGATKRQ 197 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R++ILP P +TG A G W+ + +E+ + T GLG I + + Sbjct: 198 VVRHVILPSALPSILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVT 251 Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583 V++G+L++ L R + L + R Sbjct: 252 DVVIMGILVIAAIAFVLEFTIRRIERALVPWAGR 285 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 103/259 (39%), Gaps = 27/259 (10%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPI----------TLDVHSLPQYASRTTLRML 73 A +++ + L + P + V + +L Q+ + R+ Sbjct: 41 AVTILVVLAAWALSARLQLVSPVFLPSPVAVWNKLIVVISDGFVDATLLQHTVASLGRVF 100 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A+V +LL S + P+L+ ++ IP L +L +++F P K Sbjct: 101 AALVAALLIGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPLVIIWFGIGEPSK--- 157 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 I I + + + S + + ++ +RS + Q ++ +P ++P ++ Sbjct: 158 -----ILVIAIAMLAPVALSTASGVRGVSQERINAARSLGATKRQVVRHVILPSALPSIL 212 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + +++ GW +VA+E++ G+G I A + ++ +L + + F Sbjct: 213 TGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVIMGILVIAAIAF 266 Query: 254 LY---DQLLFRPMIVWSNK 269 + + + R ++ W+ + Sbjct: 267 VLEFTIRRIERALVPWAGR 285 >gi|257483752|ref|ZP_05637793.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330987195|gb|EGH85298.1| taurine ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012097|gb|EGH92153.1| taurine ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 291 Score = 126 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 102/313 (32%), Gaps = 32/313 (10%) Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 RLE DS L K + + + S + ++ L L + Sbjct: 3 RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAITAGG 62 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +++ + +L W G WQ + ++ R+ Sbjct: 63 WIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLD-------------------ASLQRI 103 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + + A + IP+GI IG P + P + PL+V + Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 LL+ I G A S T W+ R+++LP P +TG Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQLIRHVVLPSALPDILTGI 219 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G W+ + +E+ + T+GLG + + + VVLG+L++ A+ Sbjct: 220 RIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273 Query: 571 ---RFLWHPLYLY 580 R L L + Sbjct: 274 LGLRALQRRLVPW 286 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ ++L +R + P+++ + IP L +L Sbjct: 90 ATLWQHLDASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPTKVRAAQSLGATRWQ 201 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 255 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287 >gi|183598093|ref|ZP_02959586.1| hypothetical protein PROSTU_01456 [Providencia stuartii ATCC 25827] gi|188020250|gb|EDU58290.1| hypothetical protein PROSTU_01456 [Providencia stuartii ATCC 25827] Length = 392 Score = 126 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 23/243 (9%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 P+ ++ F L+ + + GI I I + A T +L++ Sbjct: 139 LPSPIAIILFALIAWQLAGRVMGIATFVSMIVIGAIGAWS--------EAMVTLSLVLTS 190 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 ++ L+ A+S + ++ PILD MQ+ P +L V+ F G V G Sbjct: 191 LLFCLIIGLPLGIWLARSDKAASIVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVV 247 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + IFA + + + +P DL E + SF S Q + + +P +MP ++ Sbjct: 248 VTIIFA-----LPPIIRLTILGIKQVPADLIEAAESFGASPRQLLFKVQLPLAMPTIMAG 302 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + ++ VV + MI VG G+G + I D+ + ++ + + Sbjct: 303 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIVL 355 Query: 256 DQL 258 D+L Sbjct: 356 DRL 358 Score = 93.5 bits (231), Expect = 1e-16, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 89/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L + + IAWQ G ++ T+ ++ + +G + + V+ ++ Sbjct: 135 LLTSLPSPIAIILFALIAWQLAGRVMGIATFVSMIVIGAIGAWSEAMVTLSLVLTSLLFC 194 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 II +P+GIW+ +S ++P + PA V+ +V N+ ++ I Sbjct: 195 LIIGLPLGIWLARSDKAASIVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 250 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G P D E A SF + + + LP P + G A Sbjct: 251 IFALPPIIRLTILGIKQVPADLIEAAESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLA 310 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 311 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIVLDRL 358 >gi|327193789|gb|EGE60666.1| aliphatic sulfonate ABC transporter permease [Rhizobium etli CNPAF512] Length = 381 Score = 126 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 22/253 (8%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 L R+ G ++ + V L + ++ +A+ + G+I Sbjct: 107 LPRSFGRLKSSASNRPTFASHVRGVLASLLPRYGLLIAFLALWQVSSTRGWINPAIFPPL 166 Query: 376 --VLYVIWL----------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 +L +W I++ R A +I IP+G+++G + + P Q Sbjct: 167 NVILSALWTNLANGALLDDIAISLQRSGTAFAFAVVIGIPLGLFMGQFRAVEQALDPILQ 226 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 L A +P+ + + + ++ + T + +L I G E+A Sbjct: 227 LFRQTSALALYPVFILLLGLGETSK----IFVIFWATLFPVLLATIGGVKEVDQKLIEMA 282 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++ +R +ILP P G + A I +E+ G+G + Sbjct: 283 RTYGAGSLTVFRRVILPASVPAIFVGLRLSATTALLLLIAAEMIG------ANKGIGFQV 336 Query: 544 AESTEKGSFPEVV 556 + P + Sbjct: 337 MNAQYNFQIPLMF 349 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 85/229 (37%), Gaps = 15/229 (6%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRML 73 + P L+AF+ + + + P ++ + + L +L + + R Sbjct: 135 LLPRYGLLIAFLALWQVSSTRGWINPAIFPPLNVILSALWTNLANGALLDDIAISLQRSG 194 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A +++ + R + L PIL + + L ++ Sbjct: 195 TAFAFAVVIGIPLGLFMGQFRAVEQALDPILQLFRQTSALALYPVFILLLGLG------- 247 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E + IF IF + ++ + + + + + L E++R++ F + +P S+P + Sbjct: 248 -ETSKIFVIFWATLFPVLLATIGGVKEVDQKLIEMARTYGAGSLTVFRRVILPASVPAIF 306 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +S + ++A+EMI GIG + A + + Sbjct: 307 VGLRLSATTALLLLIAAEMIGANK------GIGFQVMNAQYNFQIPLMF 349 >gi|224370190|ref|YP_002604354.1| NtrB [Desulfobacterium autotrophicum HRM2] gi|223692907|gb|ACN16190.1| NtrB [Desulfobacterium autotrophicum HRM2] Length = 297 Score = 126 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 100/288 (34%), Gaps = 20/288 (6%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCR----TLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349 F ++ W L + + R T G +L + W Sbjct: 4 FFPWVRLRPWKGRRRLKLIDRLVWRPSQNTKGGYGLSASGGESGAGYEVFGISLLVVVWV 63 Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC------ITMFRVVVLIIIASIIWIP 403 A + + T + + + G ++ RV++ I IAS++ IP Sbjct: 64 LAGTFFLSSRALEPFNQFLPVPTLKALGIAVTQGHFWVSVWASLRRVLLGITIASVLGIP 123 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 GI IGF P + S Q L + P+ + + + L++ T W Sbjct: 124 GGIVIGFYPRLRSLSYSPIQFLRMISPLSWMPVALIVFVQF----ESAIVFLIVMATVWP 179 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 I+ N G + +A + ++ II+P P +T A G AW + Sbjct: 180 IMLNTATGVGNVNPSWIRMAMNQGANHFQLIWTIIVPVSLPNVLTSLRLALGIAWIVLVP 239 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +E ++GLG I ++ + S+ ++ ++ + L+R Sbjct: 240 AEFLG------VSSGLGYLINDARDTMSYDVLMAMIIAIGILGFLLDR 281 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 91/244 (37%), Gaps = 19/244 (7%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPITLDVHSLPQYASRTTLRML 73 +F + V+V + + P + + I + + R+L Sbjct: 52 VFGISLLVVVWVLAGTFFLSSRALEPFNQFLPVPTLKALGIAVTQGHFWVSVWASLRRVL 111 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 + I+ + + RL + + ++ I L ++ ++ F+ Sbjct: 112 LGITIASVLGIPGGIVIGFYPRLRSLSYSPIQFLRMISPLSWMPVALIVFVQF------- 164 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E A +F I + VW + + + N+ ++ + + +Q W + VP S+P ++ Sbjct: 165 -ESAIVFLIVMATVWPIMLNTATGVGNVNPSWIRMAMNQGANHFQLIWTIIVPVSLPNVL 223 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 ++ +++ W +V +E + V G+G I A ++ ++ + + F Sbjct: 224 TSLRLALGIAWIVLVPAEFLGVSS------GLGYLINDARDTMSYDVLMAMIIAIGILGF 277 Query: 254 LYDQ 257 L D+ Sbjct: 278 LLDR 281 >gi|289661671|ref|ZP_06483252.1| ABC transporter permease [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 326 Score = 126 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 89/225 (39%), Gaps = 15/225 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ + L Q+ + ++ R + I F L SR +L Sbjct: 101 LPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLD 160 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 L +++++P L + +++F E A +F + + + + Y + ++ Sbjct: 161 SALQMLRNVPHLALIPLVILWFGID--------EGAKLFLVALGTFFPIYLNTYHGVRSV 212 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E++R++ L G Q FW + +P ++P ++ + + W ++ +E I Sbjct: 213 DPALIEMARNYGLRGPQLFWDVLLPGALPSILVGIRFGLGLMWLTLIVAETISASS---- 268 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 GIG A + ++ A++ + L D L R + W Sbjct: 269 --GIGYLATNAREFLQTDIVVVAIVLYALLGKLAD-LAARGLEAW 310 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R V + I I +G+ G + Q+L P PLV+ Sbjct: 125 AISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLDSALQMLRNVPHLALIPLVILWFGI 184 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ GT + I N G + E+A ++ + G + + ++LPG Sbjct: 185 ----DEGAKLFLVALGTFFPIYLNTYHGVRSVDPALIEMARNYGLRGPQLFWDVLLPGAL 240 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G G W IV+E S ++G+G + E VV+ +++ Sbjct: 241 PSILVGIRFGLGLMWLTLIVAETIS------ASSGIGYLATNAREFLQTDIVVVAIVLYA 294 Query: 564 CFVLALN 570 + Sbjct: 295 LLGKLAD 301 >gi|308188379|ref|YP_003932510.1| Taurine transport permease protein tauC [Pantoea vagans C9-1] gi|308058889|gb|ADO11061.1| Taurine transport permease protein tauC [Pantoea vagans C9-1] Length = 275 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 96/273 (35%), Gaps = 15/273 (5%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 R F L + + + ++ + + Q ++ + Sbjct: 9 SLPVRRRLRWPFSTAFTLSVLSLSLLLLLWWGVTALGLIAPLFLPSPQQVFSKLLVIASA 68 Query: 374 QDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 Q + ++ R+++ + A+ I IPVGI +G P + P ++ P Sbjct: 69 QGFMDATLWQHLAASLTRMLIALTAAAAIGIPVGILMGLSPVARGLLDPLIEIYRPIPPL 128 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + PL+V + LL+ + + +AG A S W Sbjct: 129 AYLPLMVIWFGIGETSK----ILLIYLAIFAPVTLSTLAGVRNTQQVRIRAARSLGANRW 184 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + R++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 185 QLLRWVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLA 238 Query: 552 FPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581 V+ G+ ++ +L R L L + Sbjct: 239 TDVVLAGIAVIAFIAFSLELGLRALQRRLTPWS 271 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 101/250 (40%), Gaps = 15/250 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 V +G+I L + + +V +L Q+ + + RML A+ + Sbjct: 41 VTALGLIAPLFLPSPQQVFSKLLVIASAQGFMDATLWQHLAASLTRMLIALTAAAAIGIP 100 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L S +L P+++I + IP L +L V++F E + I I+ + Sbjct: 101 VGILMGLSPVARGLLDPLIEIYRPIPPLAYLPLMVIWFGIG--------ETSKILLIYLA 152 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 +T S + N + +RS + WQ ++ +P ++P ++ + + + GW Sbjct: 153 IFAPVTLSTLAGVRNTQQVRIRAARSLGANRWQLLRWVILPGALPEILTGLRIGLGVGWS 212 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIV 265 +VA+E+I G+G + A E ++ A + ++ I +L R + Sbjct: 213 TLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAFIAFSLELGLRALQR 265 Query: 266 WSNKFRLERT 275 + E++ Sbjct: 266 RLTPWSGEQS 275 >gi|299132234|ref|ZP_07025429.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] gi|298592371|gb|EFI52571.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] Length = 277 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 ++ + + RVVV +I + + +P+G+ +G I P ++L P Sbjct: 69 LSWALSGELPLDAFASFQRVVVGFLIGAGLALPLGLLMGANDKIYRLFNPLIEVLRPIPP 128 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + N L+ G + +L N IAG + A + ++ Sbjct: 129 IAYIPLAILWFGLG----NPPAYFLISIGAFFPVLLNTIAGVRHVDGIYIRAARNLGVSQ 184 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 ++ + +ILP PY ++GA G A+ IV+E+ + +GLG I E+ E Sbjct: 185 YQMFVRVILPAATPYILSGARIGMGTAFIVVIVAEMIA------VNSGLGFRILEAREYF 238 Query: 551 SFPEVVLGVLIMCCFVLALN 570 +++ G+ + L ++ Sbjct: 239 WSDKIIAGMFTIGFLGLGID 258 Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 84/212 (39%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 LP A + R++ +I L + ++ + P++++++ IP + ++ Sbjct: 75 GELPLDAFASFQRVVVGFLIGAGLALPLGLLMGANDKIYRLFNPLIEVLRPIPPIAYIPL 134 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P A F I + + + + ++ +R+ +S +Q Sbjct: 135 AILWFGLGNPP--------AYFLISIGAFFPVLLNTIAGVRHVDGIYIRAARNLGVSQYQ 186 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P ++ + M + V+ +EMI V G+G I A + Sbjct: 187 MFVRVILPAATPYILSGARIGMGTAFIVVIVAEMIAVNS------GLGFRILEAREYFWS 240 Query: 239 LAILYAMLTMLGVIFLYDQLLFRP---MIVWS 267 I+ M T+ + D ++ R ++ W Sbjct: 241 DKIIAGMFTIGFLGLGIDTVMTRINNHLLRWH 272 >gi|152985321|ref|YP_001347063.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150960479|gb|ABR82504.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 274 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 108/284 (38%), Gaps = 23/284 (8%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVI-----GIINILLHGIQETTVPRDIVDIVPIT 55 + L + R P + A L+ ++ + + P I+ + + Sbjct: 6 LRLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTL-VE 64 Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L + + R+ + I T SRR L P +++IP L + Sbjct: 65 LARGELWGHVGASLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAIPSLAW 124 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + +++F K++ L A F ++ ++ + + R E+ R +RLS Sbjct: 125 VPLLLLWFGIDETPKIVLIVLGAFFPVY--------LALVAGVRGVDRKWVELGRLYRLS 176 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + + +P ++P L + ++S W F+VA+E+I G+G ++ + Sbjct: 177 RFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRET 230 Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLERTT 276 ++ A+L + + L D L L R + W + F E Sbjct: 231 SRPDLVIAAILVLATLGKLSDGLLRSLERRALRWRDSFDGEGGA 274 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 96/265 (36%), Gaps = 19/265 (7%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCVVCGVAIGIAWQSIGYIV 368 +++ R +R L S+ ++ + W A ++ + Sbjct: 7 RLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA 66 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + V ++ RV I S + + VG W+G + ++P Q L A Sbjct: 67 RGELWGHVG-------ASLARVAAGFAIGSGLALAVGTWVGLSRRAEAYLEPSFQALRAI 119 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P+ + PL++ +L++ G + + ++AG + E+ + + Sbjct: 120 PSLAWVPLLLLWFGI----DETPKIVLIVLGAFFPVYLALVAGVRGVDRKWVELGRLYRL 175 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + + R I+LP P TG A +W + +E+ + T GLG +++ E Sbjct: 176 SRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIA------ATQGLGYLLSDGRE 229 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 V+ +L++ + L Sbjct: 230 TSRPDLVIAAILVLATLGKLSDGLL 254 >gi|291619197|ref|YP_003521939.1| TauC [Pantoea ananatis LMG 20103] gi|291154227|gb|ADD78811.1| TauC [Pantoea ananatis LMG 20103] Length = 276 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 105/271 (38%), Gaps = 19/271 (7%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 T+ R +P + S + +L ++W G+ + S +V+ Sbjct: 11 TVRHRRLRWPFSTSFTLSALSLLVLLFVWWSVTALGLIAPLFLPSPQQVVSKLLLVAGPQ 70 Query: 379 VIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + ++ R+++ + A+ I IPVGI +G P + + I P +L P Sbjct: 71 GFMDATLWQHLSASLTRMLIALTAAAAIGIPVGIAMGISPVVRALIDPLIELYRPVPPLA 130 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + PL+V + LL+ ++ + +AG A+S T W+ Sbjct: 131 YLPLMVIWFGIGETSK----ILLIYLAIFAPVVLSTVAGVRHAQQVRLRAAASLGATRWQ 186 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 187 QLRWVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 240 Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 241 DVVLAGIAVIAVIAFGLELSLRALQRRLTPW 271 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 102/249 (40%), Gaps = 19/249 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V +G+I L + V + ++ P +L Q+ S + RML A+ + Sbjct: 38 VWWSVTALGLIAPLFLPSPQQVVSKLLLVAGPQGFMDATLWQHLSASLTRMLIALTAAAA 97 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + ++ P++++ + +P L +L V++F E + I Sbjct: 98 IGIPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 149 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + + S + WQ+ ++ +P ++P ++ + + + Sbjct: 150 IYLAIFAPVVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWVILPGALPEILTGLRIGLG 209 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF----LYDQ 257 GW +VA+E+I G+G + A E ++ A + ++ VI L + Sbjct: 210 VGWSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAVIAFGLELSLR 262 Query: 258 LLFRPMIVW 266 L R + W Sbjct: 263 ALQRRLTPW 271 >gi|15964788|ref|NP_385141.1| putative permease protein [Sinorhizobium meliloti 1021] gi|307309676|ref|ZP_07589328.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti BL225C] gi|307319473|ref|ZP_07598900.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] gi|15073966|emb|CAC45607.1| Probable glycine betaine ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306894845|gb|EFN25604.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] gi|306899888|gb|EFN30511.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti BL225C] Length = 295 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 + +T + V+S+ + ++S R ++ P+LD+MQ++P +L V Sbjct: 96 MWDDTMKTISMIFVCTVLSIAIGIPMGIIMSRSDRFQNIVNPVLDVMQTMPSFVYLIPVV 155 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + GKV G I+AI M + + +D+ E + +F S WQK Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKL 207 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P ++P ++ + ++ VV + MI V G+G + AI Q Sbjct: 208 KNVQMPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260 Query: 241 ILYAMLTMLGVIFLYDQL 258 ++ L ++G+ ++D++ Sbjct: 261 GIFNGLAIVGIAIIFDRV 278 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 88/282 (31%), Gaps = 18/282 (6%) Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349 R + I +F + ++ L H + + + I WF Sbjct: 14 RLRQLKKIIDEGFRSFTRAYGDAIESFFDPLQFFLIHAERFMTRTPWPIILILIAVIAWF 73 Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 W+ + + L + T+ + V +++ I IP+GI + Sbjct: 74 A-------SRNWKIVAGAIGTLLLIGYLDMWDDTMKTISMIFVCTVLSIAIGIPMGIIMS 126 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 + + P ++ P+ V+ VV + + + ++ ++ Sbjct: 127 RSDRFQNIVNPVLDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTN 182 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G D E A +F + W+ + + +P P + G A +++ + Sbjct: 183 LGIRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMIG- 241 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ------VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|327395527|dbj|BAK12949.1| taurine transport system permease protein TauC [Pantoea ananatis AJ13355] Length = 276 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 19/266 (7%) Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383 R +P + S + +L ++W G+ + S +V+ Sbjct: 16 RLRWPFSTSFTLSALSLLVLLFVWWSVTALGLIAPLFLPSPQQVVSKLLLVAGPQGFMDA 75 Query: 384 CI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 + ++ R+++ + A+ I IPVGI +G P + + I P +L P + PL+ Sbjct: 76 TLWQHLSASLTRMLIALTAAAAIGIPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLM 135 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + LL+ ++ + +AG A+S T W+ R++ Sbjct: 136 VIWFGIGETSK----ILLIYLAIFAPVVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWV 191 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILPG P +TG G W+ + +E+ + T GLG + + E + V+ Sbjct: 192 ILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLA 245 Query: 558 GVLIMCCFVLALN---RFLWHPLYLY 580 G+ ++ L R L L + Sbjct: 246 GIAVIAVIAFGLELSLRALQRRLTPW 271 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 102/249 (40%), Gaps = 19/249 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V +G+I L + V + ++ P +L Q+ S + RML A+ + Sbjct: 38 VWWSVTALGLIAPLFLPSPQQVVSKLLLVAGPQGFMDATLWQHLSASLTRMLIALTAAAA 97 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + ++ P++++ + +P L +L V++F E + I Sbjct: 98 IGIPVGIAMGISPVVRALIDPLIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 149 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + + S + WQ+ ++ +P ++P ++ + + + Sbjct: 150 IYLAIFAPVVLSTVAGVRHAQQVRLRAAASLGATRWQQLRWVILPGALPEILTGLRIGLG 209 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF----LYDQ 257 GW +VA+E+I G+G + A E ++ A + ++ VI L + Sbjct: 210 VGWSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAVIAFGLELSLR 262 Query: 258 LLFRPMIVW 266 L R + W Sbjct: 263 ALQRRLTPW 271 >gi|259910017|ref|YP_002650373.1| taurine transporter subunit [Erwinia pyrifoliae Ep1/96] gi|224965639|emb|CAX57171.1| Taurine ABC transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283480113|emb|CAY76029.1| Taurine transport permease protein tauC [Erwinia pyrifoliae DSM 12163] Length = 275 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 99/266 (37%), Gaps = 19/266 (7%) Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFC----VVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 +P S + +L ++W ++ + + Q ++ + Sbjct: 15 PLRWPLRRRLTISLATLLVLLIVWWAVTRLQLIAPLFLPAPQQVWHQLMAIAGPTGFMDA 74 Query: 380 IWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ R+V+ ++ A +I +PVGI +G + + P +L P + PL+ Sbjct: 75 TLWQHLAASLTRIVIALLAAVVIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLM 134 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + LL+ + + +AG A S + W+ ++ Sbjct: 135 VIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKNAQQVRLRAARSLGASRWQVLWFV 190 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPG P +TG G W+ + +E+ + T GLG + + E + V+ Sbjct: 191 VLPGALPEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLA 244 Query: 558 GVLIMCCFVLALN---RFLWHPLYLY 580 G+ ++ AL R L H L + Sbjct: 245 GITVIALIAFALELALRALQHRLTPW 270 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 112/260 (43%), Gaps = 21/260 (8%) Query: 10 FISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQ 63 + RR+ ++ LL ++V + + L P+ + + P +L Q Sbjct: 19 PLRRRLTISLATLLVLLIVWWAVTRLQLIAPLFLPAPQQVWHQLMAIAGPTGFMDATLWQ 78 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + + R++ A++ +++ L + L +L P++++ + +P L +L V++F Sbjct: 79 HLAASLTRIVIALLAAVVIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWF 138 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 E + I I+ + + S + N + +RS S WQ W++ Sbjct: 139 GIG--------ETSKILLIYLAIFAPVAMSALAGVKNAQQVRLRAARSLGASRWQVLWFV 190 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P ++ + + + GW +VA+E+I G+G + A E ++ Sbjct: 191 VLPGALPEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVL 243 Query: 244 AMLTMLGVIFLYDQLLFRPM 263 A +T++ +I +L R + Sbjct: 244 AGITVIALIAFALELALRAL 263 >gi|315635363|ref|ZP_07890630.1| sulfonate ABC superfamily ATP binding cassette transporter, membrane protein [Arcobacter butzleri JV22] gi|315480348|gb|EFU71014.1| sulfonate ABC superfamily ATP binding cassette transporter, membrane protein [Arcobacter butzleri JV22] Length = 261 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 105/253 (41%), Gaps = 17/253 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +L V+ ++ L + P D++ L + + R L ++I Sbjct: 22 VLVLVVWQIVVQSGLVSSRVMPAPLDVISAGVTLTANGELIHHFLVSLQRALLGLIIGGS 81 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 F+ + S+ +L + ++++IP+L + +++F E + IF Sbjct: 82 IGFILGFITGLSKLAENLLDSTIQMIRTIPLLALVPLVILWFGIG--------EFSKIFL 133 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + + + + + L ++ +DL E+ + + L+ ++ F + +P +MP ++ + MS+ Sbjct: 134 LALAVFFPIYLNTFHGLRSVDKDLIEMGKVYGLNSYELFKNIILPGAMPSILVGLRMSLG 193 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258 W +++ +E I + GIG A + ++ +L + + D L Sbjct: 194 FMWLYLIVAETIASSE------GIGYMTMNAREFLQTDIMVLGILLYAVLGKISDILASV 247 Query: 259 LFRPMIVWSNKFR 271 L + + W ++ Sbjct: 248 LEKRYLKWHKGYQ 260 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 12/235 (5%) Query: 340 VSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 + ++ + W VV + + + I T +I +++ R ++ +II Sbjct: 20 IPVLVLVVWQIVVQSGLVSSRVMPAPLDVISAGVTLTANGELIHHFLVSLQRALLGLIIG 79 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 I +G G + + Q++ P PLV+ + L+ Sbjct: 80 GSIGFILGFITGLSKLAENLLDSTIQMIRTIPLLALVPLVILWFGIGEFSK----IFLLA 135 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 + I N G + D E+ + + + ++ IILPG P + G + G Sbjct: 136 LAVFFPIYLNTFHGLRSVDKDLIEMGKVYGLNSYELFKNIILPGAMPSILVGLRMSLGFM 195 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 W IV+E + + G+G + E +VLG+L+ + Sbjct: 196 WLYLIVAETIA------SSEGIGYMTMNAREFLQTDIMVLGILLYAVLGKISDIL 244 >gi|303229820|ref|ZP_07316600.1| ABC transporter, permease protein [Veillonella atypica ACS-134-V-Col7a] gi|302515580|gb|EFL57542.1| ABC transporter, permease protein [Veillonella atypica ACS-134-V-Col7a] Length = 250 Score = 126 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 10/231 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ L + G + +V + ++ R + II+ + Sbjct: 12 IAAWLIWELIVCLGGFNEALLPTPYKVLVGFGELIGDGVLFKDIADSLVRFFIGYIISVV 71 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + G+ +G+ I + I P Q++ + P +V +++ Sbjct: 72 AGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + +L + ++ + +VA +F I I+LP +FP +G A G AW Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + E+ TGLG I + +++ +L + L L+ Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232 Score = 106 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 15/237 (6%) Query: 22 LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +A L+ +I L P ++ + L + + + +R +IS+ Sbjct: 11 FIAAWLIWELIVCLGGFNEALLPTPYKVLVGFGELIGDGVLFKDIADSLVRFFIGYIISV 70 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + + + PI+ +++ I + +L F V++F + AI Sbjct: 71 VAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + S ++ NI +V+R+F + + + + +P PG+ + +++ Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 W F+V EM+ G+G I ++ A+LT+ V L D Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233 >gi|154251521|ref|YP_001412345.1| substrate-binding region of ABC-type glycine betaine transport system [Parvibaculum lavamentivorans DS-1] gi|154155471|gb|ABS62688.1| Substrate-binding region of ABC-type glycine betaine transport system [Parvibaculum lavamentivorans DS-1] Length = 633 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 98/237 (41%), Gaps = 16/237 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L +++++ + H + +P I+ + + L A +T ML ++ ++L Sbjct: 397 LPWWLIILAVAGAAWHASRHFALPV-ILAGLLFLIGTLGLWDLAIQTLALMLVSVFFAVL 455 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 A S +++P+LD MQ++P +L ++ F ++ A+FA Sbjct: 456 IGLPSGIAIAASDIARRIVLPVLDAMQTLPSFVYLIPALMLFGLG--------KVPALFA 507 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + L + R L E++ W++ + +P ++P ++ + + Sbjct: 508 TVIYATPPLIRLVDLGLRTVDRQLVEMAADLGADKWRQLIDIKLPLALPSIMAGVNQTTM 567 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + L I+ D+ L A + ++ + ++D++ Sbjct: 568 MALSMVVIASMI-------GARGLGEEVLLGIQRLDIGRGLAAGIAIVALAIVFDRI 617 Score = 84.2 bits (207), Expect = 6e-14, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 82/254 (32%), Gaps = 18/254 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW--- 381 FH +L + + + W+ ++ VA G AW + + +L++I Sbjct: 376 FHAASGWLLALIVALEAGLGALPWWLIILAVA-GAAWHASRHFALPVILAGLLFLIGTLG 434 Query: 382 ---LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 L T+ ++V + A +I +P GI I + P + P+ V+ + Sbjct: 435 LWDLAIQTLALMLVSVFFAVLIGLPSGIAIAASDIARRIVLPVLDAMQTLPSFVYLIPAL 494 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ V G E+A+ WR I Sbjct: 495 MLFGLG----KVPALFATVIYATPPLIRLVDLGLRTVDRQLVEMAADLGADKWRQLIDIK 550 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P + G A + +++ + GLG + ++ + Sbjct: 551 LPLALPSIMAGVNQTTMMALSMVVIASMIG-------ARGLGEEVLLGIQRLDIGRGLAA 603 Query: 559 VLIMCCFVLALNRF 572 + + + +R Sbjct: 604 GIAIVALAIVFDRI 617 >gi|125623880|ref|YP_001032363.1| glycine betaine-binding periplasmic protein precursor [Lactococcus lactis subsp. cremoris MG1363] gi|6119854|gb|AAF04259.1|AF139575_2 glycine-betaine binding permease protein [Lactococcus lactis] gi|7212814|gb|AAF40474.1|AF184955_2 OpuABC [Lactococcus lactis subsp. cremoris MG1363] gi|124492688|emb|CAL97642.1| glycine betaine-binding periplasmic protein precursor [Lactococcus lactis subsp. cremoris MG1363] gi|300070654|gb|ADJ60054.1| glycine betaine-binding periplasmic protein precursor [Lactococcus lactis subsp. cremoris NZ9000] Length = 573 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 17/237 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V+ I+ IL+ G + + + I L T +L + ++S++ Sbjct: 53 FWLMIAVVTILAILVSGKKFAFPLFAFIGLCLIA--NQGLWSDLMSTITLVLLSSLLSII 110 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 AKS + ++ PILD MQ++P +L V +F G V G + IFA Sbjct: 111 IGVPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA 167 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + + +L E + SF + QK + L P + ++ + ++ Sbjct: 168 -----LPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIM 222 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ D+ + ++++ + + D+ Sbjct: 223 LALSMVVIASMI-------GAPGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 75/231 (32%), Gaps = 16/231 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIW 401 FW + + I + F + + + G T+ V++ +++ II Sbjct: 53 FWLMIAVVTILAILVSGKKFAFPLFAFIGLCLIANQGLWSDLMSTITLVLLSSLLSIIIG 112 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+GIW+ ++ +QP + P V+ V+ + + Sbjct: 113 VPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----AL 168 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + G + E A SF T + + P + G A + Sbjct: 169 PPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMV 228 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + + + + + + + + ++RF Sbjct: 229 VIASMIG-------APGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272 >gi|332162774|ref|YP_004299351.1| glycine betaine transporter membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667004|gb|ADZ43648.1| glycine betaine transporter membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861135|emb|CBX71398.1| glycine betaine/L-proline transport system permease protein proW [Yersinia enterocolitica W22703] Length = 376 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ + +V I + A T +L+++ + Sbjct: 121 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 180 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 181 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 237 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 238 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 292 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 293 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 343 Score = 90.0 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 96/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + P Sbjct: 83 PLDSWV------TQGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 128 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + +T+ V+ + + Sbjct: 129 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 181 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 182 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 237 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 238 ALPPIVRLTILGIKQVPADLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 297 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 298 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 343 >gi|91762952|ref|ZP_01264917.1| glycine betaine/L-proline transport system permease [Candidatus Pelagibacter ubique HTCC1002] gi|91718754|gb|EAS85404.1| glycine betaine/L-proline transport system permease [Candidatus Pelagibacter ubique HTCC1002] Length = 717 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 95/545 (17%), Positives = 181/545 (33%), Gaps = 55/545 (10%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I + V + + +T +L A +S +F +A KS+R+ +L PIL +MQ++P Sbjct: 189 IYISVFGQWKPSMQTLSFILVAAPLSFIFGLTLGVMAFKSKRVEKLLYPILLVMQTMPQY 248 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 L +V F + AA+ V M L IP ++ E R Sbjct: 249 AVLVPAIVLFGIG--------DHAAVIITMVVAVPPMILLTLLGLRGIPPEVIEAGRMSG 300 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 + WQ + +P + ++ + ++ + V I G+G + LA+ Sbjct: 301 CNNWQLMTKVLIPTARRDILIGVNQ-------VIMVCFSMAVISAFIGAKGLGFNLLLAL 353 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 + ++ L A L + + L D++ + W+NK Y + + F Sbjct: 354 NQLNIGLALEAGLCISLIAILLDKMS----LAWANKQIDYFGNLTYFQRNKNILFFAAAV 409 Query: 294 FLRFI-----------------------GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 L I G S+ +F++ + + I + Sbjct: 410 ILGIIFSYLGSFYFKDGSNYLFEVPHNKGISTADFWNKGVDWIWDTFFHTLKIFNTWLIV 469 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFR 389 + M + +V G I +V T L W +T++ Sbjct: 470 DVLQPMRALYLRMPAVATLVLVIGAGYIIGGIRSALVVGGLTLFIALSPWWDRALVTLYM 529 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 + I++II VGI H ++ + + FP+ V+ V+ + Sbjct: 530 ATFGVFISTIIGFTVGILSFQNKHTANFMLGVCDIFQTFPSFVYLIPVMMLFGVTDTSVL 589 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + + + Y I G + P + A+ +T + I P FP+ + G Sbjct: 590 IAVIVYATIPATRY----TIEGLRSVPEALHDAATMSGVTKVQRLLKIEFPLAFPHMMLG 645 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV-LIMCCFVLA 568 A I+ LG YI ++ + L + L + L Sbjct: 646 LNQTIVFALFMVIIGAFIGTED-------LGQYILKALSDKKGAGIGLTLGLCVAFIGLI 698 Query: 569 LNRFL 573 + + Sbjct: 699 FDHLI 703 >gi|116512254|ref|YP_809470.1| ABC-type proline/glycine betaine transport system, permease component [Lactococcus lactis subsp. cremoris SK11] gi|116107908|gb|ABJ73048.1| ABC-type proline/glycine betaine transport system, permease component [Lactococcus lactis subsp. cremoris SK11] Length = 573 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 17/237 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V+ I+ IL+ G + + + I L T +L + ++S++ Sbjct: 53 FWLMIAVVTILAILVSGKKFAFPLFTFIGLCLIA--NQGLWSDLMSTITLVLLSSLLSII 110 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 AKS + ++ PILD MQ++P +L V +F G V G + IFA Sbjct: 111 IGVPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFA 167 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + + +L E + SF + QK + L P + ++ + ++ Sbjct: 168 -----LPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIM 222 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ D+ + ++++ + + D+ Sbjct: 223 LALSMVVIASMI-------GAPGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272 Score = 83.8 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 16/231 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIW 401 FW + + I + FT+ + + G T+ V++ +++ II Sbjct: 53 FWLMIAVVTILAILVSGKKFAFPLFTFIGLCLIANQGLWSDLMSTITLVLLSSLLSIIIG 112 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P+GIW+ ++ +QP + P V+ V+ + + Sbjct: 113 VPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF----AL 168 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + G + E A SF T + + P + G A + Sbjct: 169 PPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMV 228 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + + + + + + + + ++RF Sbjct: 229 VIASMIG-------APGLGRGVLAAVQSADIGKGFVSGISLVILAIIIDRF 272 >gi|83644216|ref|YP_432651.1| glycine betaine transporter membrane protein [Hahella chejuensis KCTC 2396] gi|83632259|gb|ABC28226.1| ABC-type proline/glycine betaine transport system, permease component [Hahella chejuensis KCTC 2396] Length = 369 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 16/239 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVIS 79 L A I I+ L Q + + ++ +TL + A T +L++++ Sbjct: 110 GLQAIPATIVILFFALLAWQLSGRKLAVGSLISLTLVGLIGAWNEAMVTLALVLTSVLFC 169 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 LL A+S R + P+LD MQ+ P +L V+ F G V G + I Sbjct: 170 LLIGLPTGIWLARSDRAASAVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVAVTII 226 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 FA + + + +P DL E +RSF S Q + + +P + P ++ + + Sbjct: 227 FA-----LPPLIRLTSLGIRQVPEDLVEAARSFGASPRQLLFKVQLPLATPTIMAGVNQT 281 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + VV + MI VG G+G + I D+ + ++ + + D++ Sbjct: 282 LMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVLLAIMLDRM 333 Score = 93.8 bits (232), Expect = 8e-17, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 90/280 (32%), Gaps = 12/280 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + L V +R+ + + + + F + Sbjct: 66 PFQDAVIPLDSWVEQGLDWVVNHFRPVFQAVRWPIDITLSSIEAGLQAIPATIVILFFAL 125 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 + ++G ++ T ++ +T+ V+ ++ +I +P GIW+ Sbjct: 126 LAWQLSGRKLAVGSLI-SLTLVGLIGAWNEAMVTLALVLTSVLFCLLIGLPTGIWLARSD 184 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 +S ++P + PA V+ +V ++ + ++ G Sbjct: 185 RAASAVRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVAVTIIF----ALPPLIRLTSLGI 240 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P D E A SF + + + LP P + G A + +++ + + G Sbjct: 241 RQVPEDLVEAARSFGASPRQLLFKVQLPLATPTIMAGVNQTLMLALSMVVIASMIAVG-- 298 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G + + + L+R Sbjct: 299 -----GLGQMVLRGIGRLDMGLATVGGVGIVLLAIMLDRM 333 >gi|330508590|ref|YP_004385018.1| ABC transporter permease [Methanosaeta concilii GP-6] gi|328929398|gb|AEB69200.1| ABC transporter, permease protein [Methanosaeta concilii GP-6] Length = 240 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 89/245 (36%), Gaps = 13/245 (5%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 ML W + + S +V F ++ ++ + + +I + Sbjct: 1 MLIALWETAAFLIDDRLILPSFSQVVFAFMENWRSILLDDLPVSALHFAIGMAGGLLIAL 60 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+G+ +G+ + S P ++L P + P + N ++ G + Sbjct: 61 PIGMIMGWFKFLDSIFDPIVEILRPIPPLAWIPFAIIWFGIT----NTAAGFIIFIGAVF 116 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 IL N G + P + E A T RY+ LP P G A G AW Sbjct: 117 PILTNTYMGFKSLPRVYVESAKVLGATKDLDLIRYVALPYSLPSIAAGIRIAMGIAWMCL 176 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 + +E+ + GLG I +S EV + ++++ LA++R Y+ Sbjct: 177 VAAEMFG-----VSKNGLGFKIWDSYGHYRMDEVFMYMIVLGLLGLAIDRTFR---YVVE 228 Query: 582 TRCLR 586 R L+ Sbjct: 229 ERMLK 233 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 14/191 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + L M LL + + L + PI++I++ IP L ++ F +++F Sbjct: 44 SALHFAIGMAGGLLIALPIGMIMGWFKFLDSIFDPIVEILRPIPPLAWIPFAIIWFGI-- 101 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVP 186 AA F IF V+ + + Y ++PR E ++ + Y+ +P Sbjct: 102 ------TNTAAGFIIFIGAVFPILTNTYMGFKSLPRVYVESAKVLGATKDLDLIRYVALP 155 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +S+P + + ++M W +VA+EM V G+G I + + + M+ Sbjct: 156 YSLPSIAAGIRIAMGIAWMCLVAAEMFGVSKN-----GLGFKIWDSYGHYRMDEVFMYMI 210 Query: 247 TMLGVIFLYDQ 257 + + D+ Sbjct: 211 VLGLLGLAIDR 221 >gi|326780348|ref|ZP_08239613.1| ABC-type glycine betaine transport, periplasmic subunit [Streptomyces cf. griseus XylebKG-1] gi|326660681|gb|EGE45527.1| ABC-type glycine betaine transport, periplasmic subunit [Streptomyces cf. griseus XylebKG-1] Length = 873 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 96/234 (41%), Gaps = 18/234 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 ++ GI+ ++ ++ P ++ V L D L A T +L A +++L+ Sbjct: 49 LIFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 A++SR + + P+LD MQ++P + +L V++F G V G IFA+ Sbjct: 107 PLGIWASRSRTVSAITRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +L E + +F + + +P ++P ++ + + G Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGL 218 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 11/227 (4%) Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362 F PL V L + + S ++ +L + G+ IAW Sbjct: 2 FRLPLGEWVDSAVDWLQTHLAWLFDAISSVVSGMFDGIAAVLSAPAPLIFAGIVAVIAWW 61 Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G T+ + +W + T+ V+V ++ +I +P+GIW +S+ Sbjct: 62 LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSRTVSAI 121 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 +P + PA V+ V + + + + G Sbjct: 122 TRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + E A +F T + LP P + G + +++ Sbjct: 178 ELVEAAEAFGTTSRNTLLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224 >gi|56696434|ref|YP_166791.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678171|gb|AAV94837.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 658 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 75/543 (13%), Positives = 169/543 (31%), Gaps = 48/543 (8%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 +R +PNI + + + ++ + + + T + A +T Sbjct: 94 LFGKRRWPNIGPIPWSAIA-AMTAVVGYYLGGWRMALLAGGTFVWTAMIGQ-WDIAMQTM 151 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 ++ A ++ V A KS VL P+L ++Q++P +L V++F G Sbjct: 152 SVLVVAAPLAFAIGLVLGISAWKSPSFDAVLRPVLAVLQTLPFFTYLLPAVIFFKV---G 208 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 GA ++AI M L + ++ E + + WQ ++ +P + Sbjct: 209 PTAGAVATTVYAIP-----PMILMTTLGLQKVSPEVVEAGKMSGCTRWQMLRHVYIPAAR 263 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 ++ + ++ +VV I +PG+G+ + + + +T++ Sbjct: 264 TEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKIGRSFEIGVTIV 316 Query: 250 GVIFLYDQLLFRPMIVWSNKFR---------------------LERTTGIYPADSWVLYL 288 + D++ ++ F + P S V Sbjct: 317 LLAVTLDRMSKAWVVKLPEHFERGTPFWIRHKFLLMAIGAFVGFTLIAQVVPILSEVGRK 376 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348 + + R + I P L + Sbjct: 377 QSWSQGKEIDTLIKGFLAIDAVQAITNSIRYVLNIWVLNPLRDFMLSIPTVAFVLFISAA 436 Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 +V G + + +V + D IT++ V+ + IA ++ +P+G+ Sbjct: 437 ALLVAGRREAVLAAAFFGLVALTGWWD------RSVITLYSVLAAVSIALLLGVPIGVVA 490 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 + ++ + FP+ ++ + + + + + + Y Sbjct: 491 ARKEKTANAVLLACDTAQTFPSFIYLIPAIMLFGITATSVVMSILIFSMVPLVRY----T 546 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 I G P++ E A T + + LP P G A A+ I++ Sbjct: 547 IEGLRNVPDEMTEAADMAGATRMQKLWNVQLPLALPTMAVGFNQAIMFAFFMVIIAAFIG 606 Query: 529 WGH 531 Sbjct: 607 TQD 609 Score = 84.6 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 93/240 (38%), Gaps = 19/240 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +AFVL I +L+ G +E + +V +T + T +L+A+ I+LL Sbjct: 426 TVAFVLFISAAALLVAGRREAVLAAAFFGLVALT----GWWDRSVITLYSVLAAVSIALL 481 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 +AA+ + ++ D Q+ P +L ++ F + + + Sbjct: 482 LGVPIGVVAARKEKTANAVLLACDTAQTFPSFIYLIPAIMLFGI--------TATSVVMS 533 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + L N+P ++ E + + QK W + +P ++P + ++ Sbjct: 534 ILIFSMVPLVRYTIEGLRNVPDEMTEAADMAGATRMQKLWNVQLPLALPTMAVGFNQAIM 593 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 +F V+ + I D +G + + DL + + + +D ++ + Sbjct: 594 FAFFMVIIAAFIGTQD-------LGQELQRTLAGTDLGKNFVLGICVTLMALTFDMVIMK 646 >gi|332716766|ref|YP_004444232.1| glycine betaine ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gi|325063451|gb|ADY67141.1| glycine betaine ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 295 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 100/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +VI I+ +L + + + + + + +T + V+S++ Sbjct: 61 PVVILIVGVLAWFASRSATIVGLCCGILFAIGWFGMWEDTMKTISMIFVCAVLSIVIGLP 120 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S RL ++ P+LD+MQ++P +L V+ G+V G I+AI Sbjct: 121 IGIAMARSNRLQSIVNPVLDVMQTMPSFVYLIPVVMLLG---IGRVPGVIAVVIYAIP-- 175 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + RD+ E + ++ S QK + + +P ++P ++ + ++ Sbjct: 176 ---PMIRLTNLGIRMVDRDVLEAADAYGSSKRQKLFKVQLPLALPTIMAGINQTIMMALA 232 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q ++ L ++G+ ++D++ Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278 Score = 77.3 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 29/281 (10%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 F R G + F+PL + + R L + + + + WF Sbjct: 27 RGFTRAYGGTIEGLFTPLQSFLIWAERLLIGTPWPVV-----------ILIVGVLAWFAS 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 +G+ + I ++D T+ + V +++ +I +P+GI + Sbjct: 76 RSATIVGLCCGILFAIGWFGMWED-------TMKTISMIFVCAVLSIVIGLPIGIAMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + S + P ++ P+ V+ VV + + + + + I ++ G Sbjct: 129 NRLQSIVNPVLDVMQTMPSFVYLIPVVMLLGIGRVPGVIAVVIYAI----PPMIRLTNLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A ++ + + + LP P + G A +++ + Sbjct: 185 IRMVDRDVLEAADAYGSSKRQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + ++ F V L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278 >gi|295399447|ref|ZP_06809429.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] gi|294978913|gb|EFG54509.1| binding-protein-dependent transport systems inner membrane component [Geobacillus thermoglucosidasius C56-YS93] Length = 279 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 91/254 (35%), Gaps = 13/254 (5%) Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389 + + + + + V+ + + + + + +++FR Sbjct: 28 RKWMIQAALPIFILFIWQLVGMTGAVSKTVLPTPVDIVQAAYQLTVSGELFTHLKVSVFR 87 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 V ++ + I + GI +GF + P Q+L P PL + + + Sbjct: 88 AVAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFGETSK- 146 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 LL+ G + + N G +VA H + W+ +I+P P ++G Sbjct: 147 ---VLLIAKGAFFPVYVNTFIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALPAILSG 203 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 + G AW +V+E+ T G+G + ++ + + V +G+++ Sbjct: 204 IRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAVVGKLT 257 Query: 570 N---RFLWHPLYLY 580 + R L L + Sbjct: 258 DSLVRVLEKRLLRW 271 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 106/270 (39%), Gaps = 19/270 (7%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET--TVPRDIVDIVPITLDVHSLPQY 64 +P F R + L F+L I + + + +T P DIV L + Sbjct: 21 IPAFGQFRKWMIQAALPIFILFIWQLVGMTGAVSKTVLPTPVDIVQAAYQLTVSGELFTH 80 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R ++ ++ + S + VL P + ++++IP L +++F Sbjct: 81 LKVSVFRAVAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFG 140 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 KV+ A F ++ + + + + L +V+R S W+K L Sbjct: 141 FGETSKVLLIAKGAFFPVYV--------NTFIGIRGVDAKLFDVARILHFSRWKKITLLI 192 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VP ++P ++ + +S+ W +V +E++ GIG + A + + + Sbjct: 193 VPSALPAILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVG 246 Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKFR 271 ++ V L D L L + ++ W + ++ Sbjct: 247 IILFAVVGKLTDSLVRVLEKRLLRWQDTYK 276 >gi|157369979|ref|YP_001477968.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] gi|157321743|gb|ABV40840.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] Length = 264 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 103/259 (39%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +A V V I P +V L Q+ + ++ R L I Sbjct: 19 VALVAVWQISVEAGWLSNRILPAPSAVVTAFWTLTKSGELWQHLTISSWRALIGFSIGGS 78 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + SR +L + +++++P L + +++F E A IF Sbjct: 79 IGLALGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ESAKIFL 130 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + ++ + + Y + NI R L E++RS+ LSG+Q F + +P ++P ++ + ++ Sbjct: 131 VALGTLFPIYLNTYHGIKNIDRGLLEMARSYGLSGFQLFAQVVLPGALPSIMVGVRFALG 190 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W ++ +E I GIG A + ++ A++ + L D QL Sbjct: 191 FMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADVSAQL 244 Query: 259 LFRPMIVWSNKFRLERTTG 277 L R + W ++L++ Sbjct: 245 LERVWLRWHPAYQLKQGEA 263 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 81/239 (33%), Gaps = 17/239 (7%) Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVV 391 R++ V +++ W S + T + I+ +R + Sbjct: 11 RLAPWALPVALVAVWQISVEAGWLSNRILPAPSAVVTAFWTLTKSGELWQHLTISSWRAL 70 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 + I I + +G G + Q++ P PLV+ Sbjct: 71 IGFSIGGSIGLALGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DESA 126 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 L+ GT + I N G E+A S+ ++G++ + ++LPG P + G Sbjct: 127 KIFLVALGTLFPIYLNTYHGIKNIDRGLLEMARSYGLSGFQLFAQVVLPGALPSIMVGVR 186 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 187 FALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239 >gi|296271876|ref|YP_003654507.1| binding-protein-dependent transporter inner membrane component [Arcobacter nitrofigilis DSM 7299] gi|296096051|gb|ADG92001.1| binding-protein-dependent transport systems inner membrane component [Arcobacter nitrofigilis DSM 7299] Length = 341 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 15/197 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + T ++++++ S+L +AKS + +L PILD MQ+ P +L V+ Sbjct: 126 WDASMTTLALVITSVLFSVLIGLPLGIWSAKSDMVEKILRPILDGMQTTPAFVYLIPIVM 185 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F G V G + IFA + + + +P DL E SRSF S Q + Sbjct: 186 LFG---IGNVPGVIVTIIFA-----LPPLIRLTNLGIRQVPADLIEASRSFGASSSQMLF 237 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P +MP ++ + ++ VV + MI VG G+G + I D+ Sbjct: 238 KVQLPVAMPTIMAGINQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDIGLA 290 Query: 242 LYAMLTMLGVIFLYDQL 258 + ++ + + D++ Sbjct: 291 AVGGIGIVILAVILDRI 307 Score = 85.7 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 80/228 (35%), Gaps = 12/228 (5%) Query: 345 DIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + F V+ + + + G V + + T+ V+ ++ + +I +P+ Sbjct: 92 VVIGFFVLLALQVSSKKMAFGTFV-SLAFIGFIGAWDASMTTLALVITSVLFSVLIGLPL 150 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW + ++P + PA V+ +V N+ ++ I + Sbjct: 151 GIWSAKSDMVEKILRPILDGMQTTPAFVYLIPIVMLFGIG----NVPGVIVTIIFALPPL 206 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G P D E + SF + + + LP P + G + + +++ Sbjct: 207 IRLTNLGIRQVPADLIEASRSFGASSSQMLFKVQLPVAMPTIMAGINQTLMLSLSMVVIA 266 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G + + + L+R Sbjct: 267 SMIAVG-------GLGQMVLRGIGRLDIGLAAVGGIGIVILAVILDRI 307 >gi|293393333|ref|ZP_06637646.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291424153|gb|EFE97369.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 279 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 104/279 (37%), Gaps = 18/279 (6%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 S + + R L + R + L + ++ I ++ + + Q + Sbjct: 9 SSVGQTARAPARRLTLPRNLWLSAATLLVT---LAVWWGITALGLISPLFLPSPQQVLHQ 65 Query: 367 IVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ + Q + ++ R+++ ++ A +I +PVGI +G + + P ++ Sbjct: 66 LLTIASPQGFMDATLWQHLAASLGRILLALLAAVMIGVPVGIAMGLNDTVRGILDPLIEI 125 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL+V + LL+ + + +AG + A Sbjct: 126 YRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVTLSTVAGVRSVAQVRLRAAR 181 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + W+ R+++LP P +TG G W+ + +E+ + T GLG + Sbjct: 182 ALGANRWQVLRFVVLPNALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQ 235 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + E + V+ G+ ++ L R L L + Sbjct: 236 SAGEFLATDVVIAGISVIAIIAFGLELGLRALQRRLTPW 274 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 105/249 (42%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + + +G+I+ L + + + + P +L Q+ + + R+L A++ +++ Sbjct: 41 VWWGITALGLISPLFLPSPQQVLHQLLTIASPQGFMDATLWQHLAASLGRILLALLAAVM 100 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + + +L P+++I + +P L +L V++F E + I Sbjct: 101 IGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 152 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + +T S + ++ + +R+ + WQ ++ +P ++P ++ + + + Sbjct: 153 IYLAIFAPVTLSTVAGVRSVAQVRLRAARALGANRWQVLRFVVLPNALPEILTGIRIGLG 212 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + ++ + + + F + + Sbjct: 213 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGLELGLRA 266 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 267 LQRRLTPWH 275 >gi|37519742|ref|NP_923119.1| ABC transporter permease protein [Gloeobacter violaceus PCC 7421] gi|35210733|dbj|BAC88114.1| ABC transporter permease protein [Gloeobacter violaceus PCC 7421] Length = 283 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 12/276 (4%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG-VAIGIAWQSIG 365 + + R L IR P+N L ++ L + V G V + Sbjct: 12 ARSGEPFRPRPRPLLGIRTDVPKNAYLLAMTLSIAVPLAGWVLLSVGGRVDPLFVPTPLA 71 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 ++ ++ RV + ++++++ IP+G+ IG + +P L Sbjct: 72 VWQAAVRLAQSGDLLNDSLASLSRVGLGFLLSALVAIPLGLLIGTFKLVEGLFEPVLGLF 131 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 PA F PL++ V ++ G+ +Y V P D+ +V+ + Sbjct: 132 RYMPAAAFIPLIILWVGL----DEPAKVAIIFIGSFFYNTLMVADAVKFVPADWLKVSYT 187 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + +ILP P + AWN +V+E+ + +GLG I Sbjct: 188 LGAGRRDAFFRVILPATLPSVIDTLRINIATAWNFVVVAELVA------ANSGLGYRILV 241 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 S E+ +G+L++ LA++ L+ Sbjct: 242 SQRFLKTDEIFVGILVIGLIGLAIDALF-KWLFRLA 276 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 87/228 (38%), Gaps = 17/228 (7%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P + L + + R+ ++S L L + + + P Sbjct: 67 PTPLAVWQAAVRLAQSGDLLNDSLASLSRVGLGFLLSALVAIPLGLLIGTFKLVEGLFEP 126 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +L + + +P F+ +++ P A + IF + T + ++ +P Sbjct: 127 VLGLFRYMPAAAFIPLIILWVGLDEP--------AKVAIIFIGSFFYNTLMVADAVKFVP 178 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 D +VS + F+ + +P ++P ++ + ++++ W FVV +E++ Sbjct: 179 ADWLKVSYTLGAGRRDAFFRVILPATLPSVIDTLRINIATAWNFVVVAELVAANS----- 233 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWS 267 G+G I ++ + I +L + + D L LFR + W+ Sbjct: 234 -GLGYRILVSQRFLKTDEIFVGILVIGLIGLAIDALFKWLFRLAVPWA 280 >gi|163789949|ref|ZP_02184385.1| hypothetical protein CAT7_06938 [Carnobacterium sp. AT7] gi|159874889|gb|EDP68957.1| hypothetical protein CAT7_06938 [Carnobacterium sp. AT7] Length = 249 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 21/220 (9%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----------GCITMFRVVVLIIIASI 399 ++ V + + W+ + + +NH + + I L +++R+++ I+I+ + Sbjct: 12 LIGLVGLFLIWEGLYFFINHPVIPEPIETIRLFIHLFPSLIPHILSSLYRILMAILISFL 71 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIWIG + P L+ P F P+ + + L+++ Sbjct: 72 IGVPLGIWIGASKWADRLLSPLVYLIYPIPKVAFLPVFMLLYGLGDASK----ISLVVWI 127 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + ++ +V G S + +V H + W+ + Y++ P I P ++G G A Sbjct: 128 IVFQLILSVRDGISQIDRSYYQVMRMMHASKWQTFIYLLCPAIIPQIISGLRVCIGIAIA 187 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 + +E + GLG YI + + E+ G+ Sbjct: 188 SLFFAE------NYATKYGLGYYIMNAWSVIDYSEMFCGI 221 Score = 96.9 bits (240), Expect = 9e-18, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 90/248 (36%), Gaps = 17/248 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L+ V + I L I +P I I SL + + R+L A++IS L Sbjct: 12 LIGLVGLFLIWEGLYFFINHPVIPEPIETIRLFIHLFPSLIPHILSSLYRILMAILISFL 71 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S+ +L P++ ++ IP + FL ++ + K+ +F Sbjct: 72 IGVPLGIWIGASKWADRLLSPLVYLIYPIPKVAFLPVFMLLYGLGDASKISLVVWIIVF- 130 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + S+ + I R +V R S WQ F YL P +P ++ + + + Sbjct: 131 -------QLILSVRDGISQIDRSYYQVMRMMHASKWQTFIYLLCPAIIPQIISGLRVCIG 183 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFLYDQL 258 + +E G+G YI A D + + + ++F + Sbjct: 184 IAIASLFFAE------NYATKYGLGYYIMNAWSVIDYSEMFCGILALCLLGFLLFKLIDI 237 Query: 259 LFRPMIVW 266 L R ++ W Sbjct: 238 LERLLVPW 245 >gi|331003007|ref|ZP_08326519.1| hypothetical protein HMPREF0491_01381 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413051|gb|EGG92426.1| hypothetical protein HMPREF0491_01381 [Lachnospiraceae oral taxon 107 str. F0167] Length = 262 Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 105/254 (41%), Gaps = 21/254 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLSAMV 77 + ++V +++ I++ ++ +++ + + R+ A Sbjct: 20 FASLLIVWELVSRFTKAGLFLPPASLILEKFILSFKEPIGKYTMLTHIGVSLYRVGVAFG 79 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +S +F S+ +L PI + ++ IP L ++ ++++F + + Sbjct: 80 LSTVFGIALGVSMGYSKLAEAILKPIFEFIRPIPPLAWIPMSILWFGLG--------DKS 131 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 F IF +T + Y+ N+ + L +R S Q F+ + +P S+P + + Sbjct: 132 KFFIIFLGCFCFITVNTYEGTKNVDKTLIGAARMLGASERQVFFDIVLPSSVPYIFAGLQ 191 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++++ GW VV +EM+ + G+G I + + + I+ ML + V F+ Sbjct: 192 IAVTAGWSAVVGAEMVHSNE------GVGWLIVMGMTYGKTVQIMVGMLAIGLVGFVLAT 245 Query: 258 L---LFRPMIVWSN 268 L R + W+N Sbjct: 246 GMAKLERRLCAWNN 259 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 10/204 (4%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 +I++ ++ ++++RV V ++++ I +G+ +G+ + ++P + + Sbjct: 50 FILSFKEPIGKYTMLTHIGVSLYRVGVAFGLSTVFGIALGVSMGYSKLAEAILKPIFEFI 109 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + P+ + + ++ G +I N G A Sbjct: 110 RPIPPLAWIPMSILWFGLGDKSK----FFIIFLGCFCFITVNTYEGTKNVDKTLIGAARM 165 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + + + I+LP PY G A W+A + +E+ G+G I Sbjct: 166 LGASERQVFFDIVLPSSVPYIFAGLQIAVTAGWSAVVGAEMVH------SNEGVGWLIVM 219 Query: 546 STEKGSFPEVVLGVLIMCCFVLAL 569 G ++++G+L + L Sbjct: 220 GMTYGKTVQIMVGMLAIGLVGFVL 243 >gi|325292270|ref|YP_004278134.1| glycine/betaine transport system; permease protein [Agrobacterium sp. H13-3] gi|325060123|gb|ADY63814.1| Glycine/betaine transport system; permease protein [Agrobacterium sp. H13-3] Length = 302 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 106/247 (42%), Gaps = 19/247 (7%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 S R+F ++ ++++ I+++ + T I + + L + A T Sbjct: 57 SSERLFIQTPWIVTMLVILAIVHLAGRSFKITGG----TAISLLMIGAVGLWRDAMTTLS 112 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 + A +I+++ L +S RL ++ P+LD+MQ++P +L VV F GK Sbjct: 113 IVAIATLIAIVIGLPLGILMGRSERLQRIINPVLDVMQTLPSFVYLIPVVVIFG---IGK 169 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 V G I+AI + + + R++ E + +F S QK + + +P ++P Sbjct: 170 VPGLIAVVIYAIP-----PVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALP 224 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ + ++ VV + M+ VG G+G + AI Q ++ Sbjct: 225 TIMTGINQTIMMALAMVVVASMVGVG-------GLGKNVLQAINNQFFTVGFLNGFALVA 277 Query: 251 VIFLYDQ 257 + ++D+ Sbjct: 278 IAIMFDR 284 Score = 87.7 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 11/231 (4%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 + + + G +++ G + + T+ V + +IA +I Sbjct: 65 TPWIVTMLVILAIVHLAGRSFKITGGTAISLLMIGAVGLWRDAMTTLSIVAIATLIAIVI 124 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 +P+GI +G + I P ++ P+ V+ VV + + ++ Sbjct: 125 GLPLGILMGRSERLQRIINPVLDVMQTLPSFVYLIPVVVIFGIG----KVPGLIAVVIYA 180 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 ++ G + E A +F + + + LP P +TG A Sbjct: 181 IPPVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALPTIMTGINQTIMMALAM 240 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +V+ + G GLG + ++ F L + + +R Sbjct: 241 VVVASMVGVG-------GLGKNVLQAINNQFFTVGFLNGFALVAIAIMFDR 284 >gi|300855011|ref|YP_003779995.1| putative nitrate/sulfonate/bicarbonate ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300435126|gb|ADK14893.1| predicted ABC nitrate/sulfonate/bicarbonate family transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 271 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 11/211 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +I ++FRV IA + I +GI +G + + P + PL Sbjct: 72 GQLINDLATSLFRVFKGYFIAVTLGISMGISMGISEKTNKFFTIVFNGIRQIPPLAWIPL 131 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + +++ G + IL N I G P + EVA + I ++ Sbjct: 132 FILWFGIGETSK----VIMIAMGAFFSILLNTINGIQNTPKQYLEVARLYKIKKVDLFKK 187 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LP P G G +W + + +E+ + ++G+G I ++ V+ Sbjct: 188 VYLPSAIPSIFVGLRLGAGASWMSVVAAEMIA------SSSGIGYRINDARSLMQSDVVI 241 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTRCLRL 587 +G++++ + ++ L + + +R RL Sbjct: 242 VGIIVIGVVGVLMDTIL-RKIAHFASRWERL 271 Score = 116 bits (292), Expect = 9e-24, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 97/258 (37%), Gaps = 20/258 (7%) Query: 19 IFDLLAFVLVIGIIN-----ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 I + L F ++I + + + D++ + L + + R+ Sbjct: 27 IINYLLFPILILVTWELISRLQIVSSILLPSIEDVIKSFISQIKSGQLINDLATSLFRVF 86 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 I++ S + + + ++ IP L ++ +++F KVI Sbjct: 87 KGYFIAVTLGISMGISMGISEKTNKFFTIVFNGIRQIPPLAWIPLFILWFGIGETSKVIM 146 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 + A F+I + + N P+ EV+R +++ F + +P ++P + Sbjct: 147 IAMGAFFSIL--------LNTINGIQNTPKQYLEVARLYKIKKVDLFKKVYLPSAIPSIF 198 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + + W VVA+EMI GIG I A ++ ++ + V Sbjct: 199 VGLRLGAGASWMSVVAAEMIASSS------GIGYRINDARSLMQSDVVIVGIIVIGVVGV 252 Query: 254 LYDQLLFRPMIVWSNKFR 271 L D +L R + +++++ Sbjct: 253 LMDTIL-RKIAHFASRWE 269 >gi|222082372|ref|YP_002541737.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727051|gb|ACM30140.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 295 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 + RT + ++S+ L A+S + ++ PILD+MQ++P +L V Sbjct: 96 MWDDTMRTVSMIFVCTILSIAIGIPIGILMARSNTVQRIINPILDVMQTMPSFVYLIPVV 155 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + GKV G I+AI M + + +D+ E + +F S QK Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTDLGIRLVDKDVLEAADAFGTSNAQKL 207 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P ++ + ++ VV + MI V G+G + AI Q Sbjct: 208 FKVQLPLALPTIMAGINQTIMMALAMVVVASMIGV-------QGLGQPVLKAIANQYFTL 260 Query: 241 ILYAMLTMLGVIFLYDQL 258 ++ L ++G+ ++D++ Sbjct: 261 GMFNGLAIVGIAVIFDRV 278 Score = 84.2 bits (207), Expect = 6e-14, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 85/280 (30%), Gaps = 18/280 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 N + I F + ++ L L Q +L I WF Sbjct: 16 RNLKKAIDDGFRGFTRAYGDTIESLFSPLQRFLIAADRFMTQTPWPIITLIILVIAWFAT 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + I + D + T+ + V I++ I IP+GI + Sbjct: 76 RSLKIVFSCLVILLLIGYFDMWDDTMR-------TVSMIFVCTILSIAIGIPIGILMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + I P ++ P+ V+ VV + + + ++ ++ G Sbjct: 129 NTVQRIINPILDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTDLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A +F + + + LP P + G A +V+ + Sbjct: 185 IRLVDKDVLEAADAFGTSNAQKLFKVQLPLALPTIMAGINQTIMMALAMVVVASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGMFNGLAIVGIAVIFDR 277 >gi|312109994|ref|YP_003988310.1| binding-protein-dependent transporters inner membrane component [Geobacillus sp. Y4.1MC1] gi|311215095|gb|ADP73699.1| binding-protein-dependent transport systems inner membrane component [Geobacillus sp. Y4.1MC1] Length = 279 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 90/254 (35%), Gaps = 13/254 (5%) Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389 + + + + + V+ + + + + + +++FR Sbjct: 28 RKWMIQAALPIFILFIWQLVGMTGAVSKTVLPTPVDIVQAAYQLTVSGELFTHLKVSVFR 87 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 ++ + I + GI +GF + P Q+L P PL + + + Sbjct: 88 AAAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFGFGETSK- 146 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 LL+ G + + N G +VA H + W+ +I+P P ++G Sbjct: 147 ---VLLIAKGAFFPVYVNTFIGIRGVDAKLFDVARILHFSRWKKITLLIVPSALPAILSG 203 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 + G AW +V+E+ T G+G + ++ + + V +G+++ Sbjct: 204 IRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVGIILFAVVGKLT 257 Query: 570 N---RFLWHPLYLY 580 + R L L + Sbjct: 258 DSLVRVLEKRLLRW 271 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 105/270 (38%), Gaps = 19/270 (7%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQET--TVPRDIVDIVPITLDVHSLPQY 64 +P F R + L F+L I + + + +T P DIV L + Sbjct: 21 IPAFGQFRKWMIQAALPIFILFIWQLVGMTGAVSKTVLPTPVDIVQAAYQLTVSGELFTH 80 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R + ++ + S + VL P + ++++IP L +++F Sbjct: 81 LKVSVFRAAAGFLLGAGIGLLAGIAVGFSTKTEDVLDPTVQMLRTIPHLAVAPLFILWFG 140 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 KV+ A F ++ + + + + L +V+R S W+K L Sbjct: 141 FGETSKVLLIAKGAFFPVYV--------NTFIGIRGVDAKLFDVARILHFSRWKKITLLI 192 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 VP ++P ++ + +S+ W +V +E++ GIG + A + + + Sbjct: 193 VPSALPAILSGIRLSLGAAWLGLVVAELMG------STEGIGYMMMDARQFSNTDIVFVG 246 Query: 245 MLTMLGVIFLYDQL---LFRPMIVWSNKFR 271 ++ V L D L L + ++ W + ++ Sbjct: 247 IILFAVVGKLTDSLVRVLEKRLLRWQDTYK 276 >gi|310765617|gb|ADP10567.1| taurine transporter subunit [Erwinia sp. Ejp617] Length = 275 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 21/266 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-------AWQSIGYIVNHFTYQDVL 377 +P S + +L ++W + + W + I + + D Sbjct: 16 LRWPLPRQLTISLATLLVLLIVWWAVTRLQLIAPLFLPAPQQVWHQLLTIASPTGFMD-A 74 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 + ++ R+V+ ++ A I +PVGI +G + + P +L P + PL+ Sbjct: 75 TLWQHLAASLTRIVIALLAAVAIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLM 134 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + LL+ + + +AG + A S + W+ ++ Sbjct: 135 VIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRLRAARSLGASRWQVLWFV 190 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +LPG P +TG G W+ + +E+ + T GLG + + E + V+ Sbjct: 191 VLPGALPEILTGVRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLA 244 Query: 558 GVLIMCCFVLALN---RFLWHPLYLY 580 G+ ++ AL R L L + Sbjct: 245 GITVIALIAFALELALRALQRRLTPW 270 Score = 111 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 103/254 (40%), Gaps = 22/254 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76 L+ ++ + + L P+ + + P +L Q+ + + R++ A+ Sbjct: 32 LVLLIVWWAVTRLQLIAPLFLPAPQQVWHQLLTIASPTGFMDATLWQHLAASLTRIVIAL 91 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + ++ L + L +L P++++ + +P L +L V++F E Sbjct: 92 LAAVAIGVPVGILMGLNDTLRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ET 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + I I+ + + S + + + +RS S WQ W++ +P ++P ++ + Sbjct: 144 SKILLIYLAIFAPVAMSALAGVKSAQQVRLRAARSLGASRWQVLWFVVLPGALPEILTGV 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + + GW +VA+E+I G+G + A + +L + + + F + Sbjct: 204 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGITVIALIAFALE 257 Query: 257 ---QLLFRPMIVWS 267 + L R + W Sbjct: 258 LALRALQRRLTPWH 271 >gi|319780587|ref|YP_004140063.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166475|gb|ADV10013.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 286 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 10/197 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ ++ RV ++ A ++ +PVG+ IG P + L P + PLVV Sbjct: 88 LLQHAIASLGRVFAALVAAILVGVPVGLAIGISTIGRGIFDPLLEFLRPIPPLAYLPLVV 147 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + L +++ M+ + + +G + A S T + R++I Sbjct: 148 IWFGIGEPSKILVITISMLA----PVALSTASGVRGVSQERINAARSLGATQRQVVRHVI 203 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG A G W+ + +E+ + T GLG I + + VV+G Sbjct: 204 LPSALPAILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVTDVVVMG 257 Query: 559 VLIMCCFVLALNRFLWH 575 +L++ L L Sbjct: 258 ILVIAAIAFVLEFTLRR 274 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 94/214 (43%), Gaps = 17/214 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+A + R+ +A+V ++L S + P+L+ ++ IP L +L Sbjct: 86 ATLLQHAIASLGRVFAALVAAILVGVPVGLAIGISTIGRGIFDPLLEFLRPIPPLAYLPL 145 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F P K I I S + + S + + ++ +RS + Q Sbjct: 146 VVIWFGIGEPSK--------ILVITISMLAPVALSTASGVRGVSQERINAARSLGATQRQ 197 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + +++ GW +VA+E++ G+G I A + Sbjct: 198 VVRHVILPSALPAILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVT 251 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269 ++ +L + + F+ + + + R ++ W+ + Sbjct: 252 DVVVMGILVIAAIAFVLEFTLRRIERVLVPWAGR 285 >gi|251799432|ref|YP_003014163.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247547058|gb|ACT04077.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length = 265 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 95/269 (35%), Gaps = 28/269 (10%) Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG---------------YIVNHFTYQDVL 377 Q + R L + +V V + + WQ +G + + Sbjct: 4 QTAAAGRTPGKLTLTGLALVFPVTLLVLWQVLGHYGYISELLFPTPYAIVEAGVSLASSG 63 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 + I++ RV++ + + + GI +G + P Q++ P+ PL Sbjct: 64 DLWSNIQISVTRVLLGFALGGSLALLFGIAVGLFRRTEKLLDPTIQMIRMIPSLAVVPLF 123 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + + LL+ + + N G N EVA + + + Sbjct: 124 ILWFGIGEESK----VLLIAKSAFFPLYINTFLGIRNVDNKLFEVARVLGFSRLKQITRL 179 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ILP P + GA + G +W +V+E+ + T+G+G ++++ + P V + Sbjct: 180 ILPAALPNIILGARLSIGLSWLGLVVAELIA------STSGIGYMMSDARQFADTPVVFV 233 Query: 558 GVLIMCCFVLALNRFLW---HPLYLYGTR 583 G+ I L + L L + R Sbjct: 234 GIFIFAVLGLFTDTLLALIERRLLRWKDR 262 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 97/266 (36%), Gaps = 26/266 (9%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQE---------TTVPRDIVDIVPITLDVHSLPQYASR 67 P L LV + ++L + P IV+ L Sbjct: 12 PGKLTLTGLALVFPVTLLVLWQVLGHYGYISELLFPTPYAIVEAGVSLASSGDLWSNIQI 71 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+L + ++ RR +L P + +++ IP L + +++F Sbjct: 72 SVTRVLLGFALGGSLALLFGIAVGLFRRTEKLLDPTIQMIRMIPSLAVVPLFILWFGIG- 130 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E + + I S + + + + + N+ L EV+R S ++ L +P Sbjct: 131 -------EESKVLLIAKSAFFPLYINTFLGIRNVDNKLFEVARVLGFSRLKQITRLILPA 183 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P ++ +S+ W +V +E+I GIG ++ A + D + + Sbjct: 184 ALPNIILGARLSIGLSWLGLVVAELIA------STSGIGYMMSDARQFADTPVVFVGIFI 237 Query: 248 MLGVIFLYDQLL---FRPMIVWSNKF 270 + D LL R ++ W +++ Sbjct: 238 FAVLGLFTDTLLALIERRLLRWKDRY 263 >gi|159905859|ref|YP_001549521.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C6] gi|159887352|gb|ABX02289.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C6] Length = 253 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 96/247 (38%), Gaps = 14/247 (5%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV-----IWLGCIT 386 ++L N + + + W + + + + +++ V + I I+ Sbjct: 1 MKLLKNLTLPIIGILAWELLAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIIS 60 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + RV++ IA IP+G+ +G+ I+ + +LL P + PL ++ Sbjct: 61 IKRVLIGFFIAGAFAIPIGLLMGYYSFINDLLDMTVELLRPIPPLAWVPLALAWFGIGES 120 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + + ++ G + IL N I+G P E A + + + +++P P Sbjct: 121 SMH----FIIFIGAFFPILINTISGVKGVPVIMVEAAKTLGGSTKDILKSVVVPASSPDI 176 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 +TG G AW + +E+ GLG I + VV ++I+ Sbjct: 177 LTGLRIGAGIAWMCVVAAEMLPGSD-----AGLGYLIMYAYSLSKMNVVVASMIIIGIIG 231 Query: 567 LALNRFL 573 + L++ L Sbjct: 232 IILDKGL 238 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 78/204 (38%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L + + R+L I+ F L + +L +++++ IP L + Sbjct: 48 LGTGNLIENTIISIKRVLIGFFIAGAFAIPIGLLMGYYSFINDLLDMTVELLRPIPPLAW 107 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + + +F F IF + + + + +P + E +++ S Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILINTISGVKGVPVIMVEAAKTLGGS 159 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + VP S P ++ + + W VVA+EM+ D G+G I A Sbjct: 160 TKDILKSVVVPASSPDILTGLRIGAGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYSL 214 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ +M+ + + + D+ L Sbjct: 215 SKMNVVVASMIIIGIIGIILDKGL 238 >gi|330806952|ref|YP_004351414.1| taurine ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375060|gb|AEA66410.1| Taurine ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 279 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 96/270 (35%), Gaps = 18/270 (6%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH----FTYQ 374 + P + S + +L ++W G+ + S ++ T Sbjct: 15 SRRATNDSRPSLSTRWISGLTLIALLAVWWAVTASGLIEPLFLPSPSAVLQKGWLLATSG 74 Query: 375 DVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + +W ++ R+ + ++ A + +PVGI IG + P + P + Sbjct: 75 YMDSTLWQHLAASLERIGLGLLFAVLTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAY 134 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL+V L+ LL+ I G A S T + Sbjct: 135 LPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDRAKLRAAQSLGATRAQL 190 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R++I+P P +TG G W+ + +E+ + T+GLG + + + Sbjct: 191 IRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTD 244 Query: 554 EVVLGVLIMCCFVLALN---RFLWHPLYLY 580 VVLG+L++ A+ R L L + Sbjct: 245 VVVLGILVIALIAFAMEMGLRALQRKLVPW 274 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 88/212 (41%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ ++ ++L +R VL P+++ + IP L +L Sbjct: 78 STLWQHLAASLERIGLGLLFAVLTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPL 137 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ EL+ + I+ + + + + + R ++S + Q Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDRAKLRAAQSLGATRAQ 189 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ VP ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 190 LIRHVIVPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 244 DVVVLGILVIALIAFAMEMGLRALQRKLVPWH 275 >gi|282864305|ref|ZP_06273361.1| Substrate-binding region of ABC-type glycine betaine transport system [Streptomyces sp. ACTE] gi|282560792|gb|EFB66338.1| Substrate-binding region of ABC-type glycine betaine transport system [Streptomyces sp. ACTE] Length = 879 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 88/233 (37%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L++ I +L +P + +D +L A T ++ A VI+++ Sbjct: 48 PLLMAAIFAVLAFWLRGIIPAVLTFAGFALIDSLALWDEAMATLSLVIVAAVITIVIAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA++ ++ L P+LD+MQ++P +L V++F G G +FA+ Sbjct: 108 MGIWAARNSKVSATLRPVLDVMQTMPAFVYLIPGVMFFGV---GVTPGVIATIVFAMPPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F + + +P ++P ++ + + Sbjct: 165 -----VRMTELGIRQVDGELVEAAEAFGTTPKHTLTRVQLPLALPTIMAGINQVIMLALS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV M G + AI + + + + ++ + D++ Sbjct: 220 MVVIGGMAGAGGLGEK-------VYAAITQLQVGLAAESGIAVVILAMYLDRM 265 Score = 85.4 bits (210), Expect = 3e-14, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 6/181 (3%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 +L F V+ GI + + F D L + T+ V+V +I +I + Sbjct: 49 LLMAAIFAVLAFWLRGIIPAVLTF--AGFALIDSLALWDEAMATLSLVIVAAVITIVIAV 106 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW +S+ ++P ++ PA V+ V + + Sbjct: 107 PMGIWAARNSKVSATLRPVLDVMQTMPAFVYLIPGVMFFGVGVTPGVIATIVF----AMP 162 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G + E A +F T + LP P + G A + + Sbjct: 163 PGVRMTELGIRQVDGELVEAAEAFGTTPKHTLTRVQLPLALPTIMAGINQVIMLALSMVV 222 Query: 523 V 523 + Sbjct: 223 I 223 >gi|325922412|ref|ZP_08184181.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Xanthomonas gardneri ATCC 19865] gi|325547109|gb|EGD18194.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Xanthomonas gardneri ATCC 19865] Length = 284 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 17/260 (6%) Query: 3 LYNILPPFISRRIFPNIFDLLA---FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59 L P + R+ + L F + I + L + P + Sbjct: 12 LSTTAPARLRLRLPASSLGWLLPLSFFGALEIASALGWTPRYLLPPPSQILTTLADEAGR 71 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + + LR+L+ I + SR L ++ P ++++P L ++ Sbjct: 72 GLASHIGASVLRVLAGFAIGAGLGLLIGVGVGLSRWLEQLIDPSFQALRAVPSLAWVPLL 131 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++ E I I + + + L + R L E+ S+ LS + Sbjct: 132 LLWMGID--------EAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKPRL 183 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P ++P + + S+S W F+VA+E+I G+G ++ + Sbjct: 184 VRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSRPD 237 Query: 240 AILYAMLTMLGVIFLYDQLL 259 ++ A++ + + L D +L Sbjct: 238 IVIGAIVLLALLGKLSDGVL 257 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 97/262 (37%), Gaps = 15/262 (5%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV-CGVAIGIAWQSI----GYIVNHF 371 R + P + ++L + +F + A+G + + I+ Sbjct: 6 LRVARSLSTTAPARLRLRLPASSLGWLLPLSFFGALEIASALGWTPRYLLPPPSQILTTL 65 Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + + ++ RV+ I + + + +G+ +G + I P Q L A P+ Sbjct: 66 ADEAGRGLASHIGASVLRVLAGFAIGAGLGLLIGVGVGLSRWLEQLIDPSFQALRAVPSL 125 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + PL++ + L+ G + + V++G E+ S+ ++ Sbjct: 126 AWVPLLLLWMGI----DEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKP 181 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 R R I+LP P TG T+ AW + +E+ + T GLG +++ E Sbjct: 182 RLVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIA------ATRGLGYLLSDGRETSR 235 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 V+ ++++ + L Sbjct: 236 PDIVIGAIVLLALLGKLSDGVL 257 >gi|182439684|ref|YP_001827403.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468200|dbj|BAG22720.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces griseus subsp. griseus NBRC 13350] Length = 873 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 96/234 (41%), Gaps = 18/234 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 ++ GI+ ++ ++ P ++ V L D L A T +L A +++L+ Sbjct: 49 LIFAGIVAVIAWWLRGL--PAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAV 106 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 A++SR + + P+LD MQ++P + +L V++F G V G IFA+ Sbjct: 107 PLGIWASRSRTVSAITRPVLDFMQTMPAMVYLIPGVIFFGV---GVVPGIIATIIFALPP 163 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +L E + +F + + +P ++P ++ + + G Sbjct: 164 G-----VRMTELGIRQVDGELVEAAEAFGTTSRNILLRVQLPLALPTIMAGINQVIMLGL 218 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 219 SMVVIAGMVGGGGLGGS-------VYRAIGNVDVGLGFEAGISIVILAMYLDRM 265 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 11/227 (4%) Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSN--QRVSYMLDIFWFCVVCGVAIGIAWQ 362 F PL V L + + S ++ +L + G+ IAW Sbjct: 2 FRLPLGEWVDSAVDWLQTHLAWLFDAISSVVSGMFDGIAAVLSAPAPLIFAGIVAVIAWW 61 Query: 363 SIGYIVNHFTYQDVLYV----IWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G T+ + +W + T+ V+V ++ +I +P+GIW +S+ Sbjct: 62 LRGLPAALLTFVGFALIDSVELWDEAMDTLTLVLVATLVTLVIAVPLGIWASRSRTVSAI 121 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 +P + PA V+ V + + + + G Sbjct: 122 TRPVLDFMQTMPAMVYLIPGVIFFGVGVVPGIIATIIF----ALPPGVRMTELGIRQVDG 177 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + E A +F T + LP P + G + +++ Sbjct: 178 ELVEAAEAFGTTSRNILLRVQLPLALPTIMAGINQVIMLGLSMVVIA 224 >gi|254470962|ref|ZP_05084365.1| taurine ABC transporter, permease protein [Pseudovibrio sp. JE062] gi|211960104|gb|EEA95301.1| taurine ABC transporter, permease protein [Pseudovibrio sp. JE062] Length = 289 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 72/187 (38%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++FRV+ +++ +++ IP+G+ +G P + + P PL++ Sbjct: 96 GISVFRVLAGVLLGALVGIPLGLAMGLSSVARGLFDPIVEFMRPIPPLALIPLIILWFGI 155 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ + + + +G ++ A S + + ++ILP Sbjct: 156 ----DETAKIFLLFLASLFIMTIAARSGVNSVKITKVHAAYSLGASRTQILFHVILPNAL 211 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TG TA G W + +E+ + G+G+ I + VV+G+ ++ Sbjct: 212 PEIFTGLRTAMGVCWGTVVAAELVAADK------GVGSMIMIAKNFLQTDTVVIGIFVIG 265 Query: 564 CFVLALN 570 + Sbjct: 266 LIGYTIE 272 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 99/260 (38%), Gaps = 22/260 (8%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIV-----DIVPITLDVHSLPQYASRTTLRM 72 +I ++ + GI + L D ++ + + + R+ Sbjct: 43 SILTVVVLLAAWGIASALGMLESFYWPSVDATITRMSKLLSAGFRNVAFWDHIGISVFRV 102 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+ +++ L S + PI++ M+ IP L + +++F Sbjct: 103 LAGVLLGALVGIPLGLAMGLSSVARGLFDPIVEFMRPIPPLALIPLIILWFGID------ 156 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 E A IF +F + ++ MT + + ++ + S S Q +++ +P ++P + Sbjct: 157 --ETAKIFLLFLASLFIMTIAARSGVNSVKITKVHAAYSLGASRTQILFHVILPNALPEI 214 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + +M W VVA+E++ G+GS I +A ++ + + + Sbjct: 215 FTGLRTAMGVCWGTVVAAELVA------ADKGVGSMIMIAKNFLQTDTVVIGIFVIGLIG 268 Query: 253 FLYD---QLLFRPMIVWSNK 269 + + + L R +I W K Sbjct: 269 YTIELGMRYLERWLIPWQGK 288 >gi|170724162|ref|YP_001751850.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] gi|169762165|gb|ACA75481.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] Length = 528 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 68/556 (12%), Positives = 170/556 (30%), Gaps = 74/556 (13%) Query: 18 NIFDLLAFVLVIGIINILL----HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 + + ++I ++ + ++ +V + L + + R+ Sbjct: 26 SRILAVLLPILIALLWVAASQQHWMSEQILPAPSLVWQSAVEFGSGELWGHLWISLQRLW 85 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +++ + + SR +++P + IP L ++ +++F Sbjct: 86 WGLLVGIASGLLLGAWLGTSRNAQTLVLPTFVALAQIPTLAWIPLFMLFFGIG------- 138 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 EL + + + V +T + + L E + + RL L +P ++P + Sbjct: 139 -ELLKLVVLVKAVVVPVTLHTLVGVRDTQPKLREAAAALRLPPHLLILRLLLPAALPAFL 197 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + ++++ GW ++A E++ + GIG + + L +L +L + V Sbjct: 198 TGVRLALATGWTSLLAVELLASSE------GIGYLMVWGRQLFMLDLVLLCILMIGLV-- 249 Query: 254 LYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNV 313 G FS L + Sbjct: 250 ---------------------------------------------GGLMDRGFSTLEKRL 264 Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + P L V+ ++ + I + + F Sbjct: 265 LYWPQPATGEHQRGPLPTGWLSLLLPVALLMLWQASSSFGWIDQNILTSPLDVVRTLFAG 324 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + +++ R + +++ + G+ +G + P L + Sbjct: 325 LADGSLPEAMLLSLQRTLTGLVLGGGAGLLSGLLLGLSHNAERLFGPSLSALRQVALFAW 384 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL+ + N+ + + +L G ++ E + + W+ Sbjct: 385 VPLLTAWFGLGEGAKNV----FVGLAAFFPLLIATQRGTASLSPQLGEAGRTLRLNQWQR 440 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R ++LPG P G + AW +I +E G+ + + + + Sbjct: 441 LRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYFMPSD-----GGIASLMIGAQQLFRMD 495 Query: 554 EVVLGVLIMCCFVLAL 569 +V+ +L++ L Sbjct: 496 QVMAAMLLIGLVGALL 511 Score = 98.1 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 T P D+V + L SLP+ + R L+ +V+ + L S + Sbjct: 311 LTSPLDVVRTLFAGLADGSLPEAMLLSLQRTLTGLVLGGGAGLLSGLLLGLSHNAERLFG 370 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L ++ + + ++ +F K + LAA F + + + ++ Sbjct: 371 PSLSALRQVALFAWVPLLTAWFGLGEGAKNVFVGLAAFF--------PLLIATQRGTASL 422 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E R+ RL+ WQ+ L +P + P + + +S+ W + +E + D Sbjct: 423 SPQLGEAGRTLRLNQWQRLRLLVLPGAAPAIFAGLRLSLIYAWLGTIGAEYFMPSD---- 478 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GI S + A + + ++ AML + V L L + + + + ++R Sbjct: 479 -GGIASLMIGAQQLFRMDQVMAAMLLIGLVGALLGNL-GQRLEMRATRWR 526 Score = 72.6 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 90/266 (33%), Gaps = 17/266 (6%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV----VCGVAIGIAWQSIG 365 K+ LG +R + ++ + W I A + Sbjct: 3 GILSKRAWVRLGPLRGPSTAQGRSRILAVLLPILIALLWVAASQQHWMSEQILPAPSLVW 62 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 F ++ +W I++ R+ +++ + +G W+G + + + P L Sbjct: 63 QSAVEFGSGELWGHLW---ISLQRLWWGLLVGIASGLLLGAWLGTSRNAQTLVLPTFVAL 119 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 A P + PL + L + L ++ + + G +E A++ Sbjct: 120 AQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TLHTLVGVRDTQPKLREAAAA 175 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + ++LP P ++TG A W + + E+ + + G+G + Sbjct: 176 LRLPPHLLILRLLLPAALPAFLTGVRLALATGWTSLLAVELLA------SSEGIGYLMVW 229 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR 571 + V+L +L++ ++R Sbjct: 230 GRQLFMLDLVLLCILMIGLVGGLMDR 255 >gi|242238345|ref|YP_002986526.1| glycine betaine transporter membrane protein [Dickeya dadantii Ech703] gi|242130402|gb|ACS84704.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech703] Length = 392 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 L + I+ L Q + + ++ I + A T +L+A+ L Sbjct: 138 LTGMPAPVAILLFSLLAWQIASAGMGVATLLALIVIGAIGAWSQAMITLSLVLTALFFCL 197 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + S+R V+ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 198 IIGLPLGVWLSHSQRAARVVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 254 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 255 A-----LPPIVRLTILGIRQVPADLVEAAESFGASPRQMLFKVKLPLAMPTIMAGVNQTL 309 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D++ Sbjct: 310 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVVLAIILDRI 360 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 85/235 (36%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L V + +AWQ + T ++ + +G IT+ V+ + Sbjct: 137 LLTGMPAPVAILLFSLLAWQIASAGMGVATLLALIVIGAIGAWSQAMITLSLVLTALFFC 196 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 II +P+G+W+ + ++P + PA V+ +V N+ ++ I Sbjct: 197 LIIGLPLGVWLSHSQRAARVVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 252 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G P D E A SF + + + LP P + G A Sbjct: 253 IFALPPIVRLTILGIRQVPADLVEAAESFGASPRQMLFKVKLPLAMPTIMAGVNQTLMLA 312 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 313 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVVLAIILDRI 360 >gi|157372796|ref|YP_001480785.1| taurine transporter subunit [Serratia proteamaculans 568] gi|157324560|gb|ABV43657.1| binding-protein-dependent transport systems inner membrane component [Serratia proteamaculans 568] Length = 279 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 99/267 (37%), Gaps = 17/267 (6%) Query: 321 GVIRFHFPENFLQLCSNQRV--SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 RF P N + V + + ++ + + Q + ++ + Q + Sbjct: 18 PTRRFSVPRNLWLSSATLLVVLAIWWGVTALNLISPLFLPAPQQVLHQLITIASPQGFMD 77 Query: 379 VIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ R++V ++ A II +PVGI +G + + P ++ P + PL Sbjct: 78 ATLWQHLAASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPL 137 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V + LL+ + + +AG + A + W+ R+ Sbjct: 138 MVIWFGIGETSK----ILLIYLAIFAPVTLSAVAGVRSVAQVRVRAARALGANRWQLLRF 193 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LP P +TG G W+ + +E+ + T GLG + + E + V+ Sbjct: 194 VVLPSALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVL 247 Query: 557 LGVLIMCCFVLALN---RFLWHPLYLY 580 G+ ++ L R L L + Sbjct: 248 AGIGVIAIIAFGLELGLRALQRRLTPW 274 Score = 116 bits (292), Expect = 9e-24, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 105/254 (41%), Gaps = 22/254 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76 L+ + G+ + L P+ ++ + P +L Q+ + + R+L A+ Sbjct: 36 LVVLAIWWGVTALNLISPLFLPAPQQVLHQLITIASPQGFMDATLWQHLAASLGRILVAL 95 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + +++ + + +L P+++I + +P L +L V++F E Sbjct: 96 LAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIG--------ET 147 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + I I+ + +T S + ++ + +R+ + WQ ++ +P ++P ++ + Sbjct: 148 SKILLIYLAIFAPVTLSAVAGVRSVAQVRVRAARALGANRWQLLRFVVLPSALPEILTGI 207 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + + GW +VA+E+I G+G + A + +L + + + F + Sbjct: 208 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIGVIAIIAFGLE 261 Query: 257 ---QLLFRPMIVWS 267 + L R + W Sbjct: 262 LGLRALQRRLTPWH 275 >gi|184200966|ref|YP_001855173.1| putative ABC transporter permease protein [Kocuria rhizophila DC2201] gi|183581196|dbj|BAG29667.1| putative ABC transporter permease protein [Kocuria rhizophila DC2201] Length = 293 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 93/230 (40%), Gaps = 10/230 (4%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 F + G + A++ + + V+ +++R++ +++A+ I + Sbjct: 62 AWWAFTYAAAGGSTMIAAFRPEQLPGAVGSLLERGVVVQDAVTSLWRLLGGLLLATAIGV 121 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+G+ IG + P Q L + P+ V+ ++ W Sbjct: 122 PLGLVIGSWQRVRWASAPVVQFLRMVSPLSWAPVAVALFGVGSAPVVFLVAA----AAVW 177 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I N AG +A VA + T + ++ P I PY +TG A G +W + Sbjct: 178 PITLNTAAGVAALDPAHLRVARTLGATPFERLLTVVFPSIRPYVMTGVRLALGISWVVLV 237 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +E+ +TGLG I + ++ ++ E+++ +L++ +AL+ Sbjct: 238 PAEMLG------VSTGLGYEILNARDRLAYDEMLVVILVIGLLGIALDAL 281 Score = 99 bits (248), Expect = 1e-18, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 84/242 (34%), Gaps = 17/242 (7%) Query: 20 FDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 F +L V G P + V L+ + Q A + R+L + Sbjct: 54 FGVLVTVAAWWAFTYAAAGGSTMIAAFRPEQLPGAVGSLLERGVVVQDAVTSLWRLLGGL 113 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +++ + +R+ P++ ++ + L + V F Sbjct: 114 LLATAIGVPLGLVIGSWQRVRWASAPVVQFLRMVSPLSWAPVAVALFGVG--------SA 165 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 +F + + VW +T + + + V+R+ + +++ + P P ++ + Sbjct: 166 PVVFLVAAAAVWPITLNTAAGVAALDPAHLRVARTLGATPFERLLTVVFPSIRPYVMTGV 225 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +++ W +V +EM+ V G+G I A +L +L + + D Sbjct: 226 RLALGISWVVLVPAEMLGVST------GLGYEILNARDRLAYDEMLVVILVIGLLGIALD 279 Query: 257 QL 258 L Sbjct: 280 AL 281 >gi|150395875|ref|YP_001326342.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150027390|gb|ABR59507.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 295 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 + +T + V+S+ + ++S R V+ P+LD+MQ++P +L V Sbjct: 96 MWDDTMKTISMIFVCTVLSIAVGIPMGIIMSRSDRFQNVVNPVLDVMQTMPSFVYLIPVV 155 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + GKV G I+AI M + + +D+ E + +F S WQK Sbjct: 156 MLLG---IGKVPGLIAVVIYAIP-----PMIRLTNLGIRLVDKDVLEAADAFGSSNWQKL 207 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P ++P ++ + ++ VV + MI V G+G + AI Q Sbjct: 208 KNVQMPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260 Query: 241 ILYAMLTMLGVIFLYDQL 258 ++ L ++G+ ++D++ Sbjct: 261 GIFNGLAIVGIAIIFDRV 278 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 88/282 (31%), Gaps = 18/282 (6%) Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWF 349 R + I +F + ++ L H + + + I WF Sbjct: 14 RLRQLKKIIDEGFRSFTRAYGDAIEAFFDPLQFFLIHAERFMTRTPWPIILILIALIAWF 73 Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG 409 W+ + + L + T+ + V +++ + IP+GI + Sbjct: 74 A-------SRNWKIVAGAIGTLLLIGYLDMWDDTMKTISMIFVCTVLSIAVGIPMGIIMS 126 Query: 410 FRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVI 469 + + P ++ P+ V+ VV + + + ++ ++ Sbjct: 127 RSDRFQNVVNPVLDVMQTMPSFVYLIPVVMLLGIG----KVPGLIAVVIYAIPPMIRLTN 182 Query: 470 AGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASW 529 G D E A +F + W+ + + +P P + G A +++ + Sbjct: 183 LGIRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMIG- 241 Query: 530 GHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ------VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|229587818|ref|YP_002869937.1| taurine ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359684|emb|CAY46532.1| taurine ABC transport system, permease protein [Pseudomonas fluorescens SBW25] Length = 278 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 83/219 (37%), Gaps = 14/219 (6%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 G+++ Y D LG ++ R+ + + A + +PVGI IG + P + Sbjct: 66 GWLLATSGYMDSTLWQHLGA-SLSRIGLGLGFAVLTAVPVGIAIGSNRIARGVLDPLIEF 124 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + PL+V L+ LL+ I G A Sbjct: 125 YRPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQ 180 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S + + R++ILP P +TG G W+ + +E+ + T+GLG + Sbjct: 181 SLGASRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQ 234 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + + VVLG+L++ A+ R L L + Sbjct: 235 SAAQFLVTDVVVLGILVIALIAFAMEMGLRALQRKLVPW 273 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 85/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ + ++L +R VL P+++ + IP L +L Sbjct: 77 STLWQHLGASLSRIGLGLGFAVLTAVPVGIAIGSNRIARGVLDPLIEFYRPIPPLAYLPL 136 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ EL+ + I+ + + + + + ++S S Q Sbjct: 137 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGASRAQ 188 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 189 LIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 242 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 243 DVVVLGILVIALIAFAMEMGLRALQRKLVPWH 274 >gi|27381358|ref|NP_772887.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354525|dbj|BAC51512.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 257 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 94/247 (38%), Gaps = 23/247 (9%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------------IT 386 S F +W + G V+ + L ++ G +T Sbjct: 8 TSRQRVAFGLAFFVLFVALWSWATFGGHVSKTFLANPLTMVQEGFDLLTKQGFMFDIGMT 67 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 ++RVV +A+II +P G+ +G + + ++PF PA+ F PL++ L Sbjct: 68 IWRVVGGFALAAIIAVPFGVLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGEL 127 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 L++ G+ + ++ V A D E A + + R ++LP P Sbjct: 128 QK----LLVIFIGSVFQVILMVAVTVGATRRDLVEAAYTLGASDRGIIRRVLLPSSAPEI 183 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G AW IV+E+ ++G+G I +S + +++ G++++ Sbjct: 184 AEILRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIVIGLIG 237 Query: 567 LALNRFL 573 L + Sbjct: 238 LVSDFLF 244 Score = 96.1 bits (238), Expect = 2e-17, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 92/257 (35%), Gaps = 19/257 (7%) Query: 20 FDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 F L FVL + + + G P +V L T R++ Sbjct: 15 FGLAFFVLFVALWSWATFGGHVSKTFLANPLTMVQEGFDLLTKQGFMFDIGMTIWRVVGG 74 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 ++ + + L + + L P + + +P F+ +++ E Sbjct: 75 FALAAIIAVPFGVLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG--------E 126 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 L + IF V+ + + ++ RDL E + + S + +P S P + Sbjct: 127 LQKLLVIFIGSVFQVILMVAVTVGATRRDLVEAAYTLGASDRGIIRRVLLPSSAPEIAEI 186 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + + + W +V+ +E+I GIG I + + I++ ++ + + + Sbjct: 187 LRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIVIGLIGLVS 240 Query: 256 DQLLFRPMIVWSNKFRL 272 D LF+ W ++L Sbjct: 241 D-FLFKAFNAWLFPWKL 256 >gi|302548557|ref|ZP_07300899.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Streptomyces hygroscopicus ATCC 53653] gi|302466175|gb|EFL29268.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Streptomyces himastatinicus ATCC 53653] Length = 317 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 76/189 (40%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R +A +I +P+G+ IG ++ + P ++ A P+ V + Sbjct: 123 ASLARSFTGFGLAVVIGVPLGLLIGRYRLVADLLGPLLEVFRNTAALALLPVFVLLLGIG 182 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++++ W IL N I+ ++A S ++ R ++ +ILP P Sbjct: 183 ETSK----ISIVLYACTWPILLNTISAVRQVDPTLLKLAKSMDLSSPRLFQKVILPASVP 238 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG A A + +E+ GLG I S + P++ G+L + Sbjct: 239 TIFTGIRLAGANAILVLVAAEMVG------AKEGLGYLINSSQYNFAIPQMHAGILTISV 292 Query: 565 FVLALNRFL 573 +A N+ L Sbjct: 293 IGVAFNQLL 301 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 99/257 (38%), Gaps = 18/257 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLRM 72 R + ++A + V I + + P ++ L L + R Sbjct: 69 RGLTKVAAIVALLAVWEITPRVGLVDRTFLPPFSEVARAWWELLADGQLADNTEASLARS 128 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 + ++++ L + R + +L P+L++ ++ L L V+ Sbjct: 129 FTGFGLAVVIGVPLGLLIGRYRLVADLLGPLLEVFRNTAALALLPVFVLLLGIG------ 182 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 E + I + + W + + ++ + L ++++S LS + F + +P S+P + Sbjct: 183 --ETSKISIVLYACTWPILLNTISAVRQVDPTLLKLAKSMDLSSPRLFQKVILPASVPTI 240 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + ++ + +VA+EM+ + G+G I + + + +LT+ + Sbjct: 241 FTGIRLAGANAILVLVAAEMVGAKE------GLGYLINSSQYNFAIPQMHAGILTISVIG 294 Query: 253 FLYDQLL---FRPMIVW 266 ++QLL R + W Sbjct: 295 VAFNQLLVTVERRLSSW 311 >gi|85860755|ref|YP_462957.1| sulfate transport system permease [Syntrophus aciditrophicus SB] gi|85723846|gb|ABC78789.1| sulfate transport system permease protein [Syntrophus aciditrophicus SB] Length = 280 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 86/232 (37%), Gaps = 21/232 (9%) Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 G+ + ++ + + ++ I++ RV+ ++A + IP+GI +G+ + Sbjct: 39 GVGQVAALFLQPTESLIAMGSLVTNVVISLVRVLAGYLLAVCLAIPLGILMGYYGTVYRL 98 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHL----------------NPNLWLSLLMIFGTQ 461 + F L P + PLV++ L N L + ++ G Sbjct: 99 LNGFLALFRPIPPLAWVPLVLAWFGVASLASMFGVEEGKAYLYLNNLKLSMIFIIFIGAF 158 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + +L + I G + + A W +R I+LP P V G G AW Sbjct: 159 YPVLTSAIHGVMGVRSTLLDSARVLGAGEWDIFRKILLPAAAPSIVNGMRIGLGVAWMCL 218 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ +G+G I + V+ G++ + L+ F Sbjct: 219 VSAEMLPG-----SISGVGYLITHAYTLARTDIVIAGMISIGIVGAVLDLFF 265 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 83/223 (37%), Gaps = 17/223 (7%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 + + + SL + +R+L+ ++++ L + +L L + + Sbjct: 48 LQPTESLIAMGSLVTNVVISLVRVLAGYLLAVCLAIPLGILMGYYGTVYRLLNGFLALFR 107 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAE------------LAAIFAIFTSQVWNMTFSMYQ 156 IP L ++ + +F + G E L+ IF IF + + S Sbjct: 108 PIPPLAWVPLVLAWFGVASLASMFGVEEGKAYLYLNNLKLSMIFIIFIGAFYPVLTSAIH 167 Query: 157 SLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVG 216 + + L + +R W F + +P + P +V M + + W +V++EM+ Sbjct: 168 GVMGVRSTLLDSARVLGAGEWDIFRKILLPAAAPSIVNGMRIGLGVAWMCLVSAEMLPG- 226 Query: 217 DTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + G+G I A ++ M+++ V + D Sbjct: 227 ----SISGVGYLITHAYTLARTDIVIAGMISIGIVGAVLDLFF 265 >gi|293604869|ref|ZP_06687266.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292816697|gb|EFF75781.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 256 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 84/240 (35%), Gaps = 25/240 (10%) Query: 346 IFWFCVVCGVAIGIAWQSI---------------GYIVNHFTYQDVLYVIWLGCITMFRV 390 + W V VA + W+ + + + D + + + RV Sbjct: 12 LIWVSVFSLVAFLLLWEGLCRAGAVDPIFLPAPSQVLARALSMSDQGTLFYNVLASTRRV 71 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 +V + A I+ IP+GI +G + P L P+ + PL + Sbjct: 72 MVGFLAAVIVAIPLGILLGTSKVARAVFDPIISFLRPLPSMSWIPLSLLWFGITETQKYS 131 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 ++ G+ L V+ + A + W+ R ++ PG P ++G Sbjct: 132 ----IVFMGSFVPALLYVMEASRGIDPVLVRAARNLGANRWQVMREVLFPGCLPQILSGM 187 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G +W I +E+ + GLG I E VVLG++++ VL + Sbjct: 188 KIILGLSWTCVISAELVA------SKEGLGFMIMNGKEFFQTDTVVLGMVLISFTVLVTD 241 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 102/260 (39%), Gaps = 18/260 (6%) Query: 12 SRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 +R I+ ++F L+AF+L+ G+ P ++ D +L +T Sbjct: 10 NRLIWVSVFSLVAFLLLWEGLCRAGAVDPIFLPAPSQVLARALSMSDQGTLFYNVLASTR 69 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R++ + +++ L S+ V PI+ ++ +P + ++ ++++F K Sbjct: 70 RVMVGFLAAVIVAIPLGILLGTSKVARAVFDPIISFLRPLPSMSWIPLSLLWFGITETQK 129 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 +F + ++ I L +R+ + WQ + P +P Sbjct: 130 YS--------IVFMGSFVPALLYVMEASRGIDPVLVRAARNLGANRWQVMREVLFPGCLP 181 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ M + + W V+++E++ + G+G I + ++ M+ + Sbjct: 182 QILSGMKIILGLSWTCVISAELVASKE------GLGFMIMNGKEFFQTDTVVLGMVLISF 235 Query: 251 VIFLYD---QLLFRPMIVWS 267 + + D +LL R ++ W Sbjct: 236 TVLVTDLCLRLLERWVLAWQ 255 >gi|116753834|ref|YP_842952.1| binding-protein-dependent transport systems inner membrane component [Methanosaeta thermophila PT] gi|116665285|gb|ABK14312.1| binding-protein-dependent transport systems inner membrane component [Methanosaeta thermophila PT] Length = 239 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 10/228 (4%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 W V + S +VN F +++ + I II +P+G+ Sbjct: 4 VWQISAMLVNDSLVLPSFLDVVNAFGSSWRDIFFQDLPVSLLHFFLGIFAGMIIAMPLGM 63 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 +G+ + I P +++ P + P + H + ++ G + IL Sbjct: 64 GMGWSRSLDKIIDPIVEVVRPIPPLAWIPFAIVWFGLTHES----AGFIVFIGAVFPILI 119 Query: 467 NVIAGASAFPNDFKEVASSFHITG-WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 N G P + E A T RY+ LP P G A G AW + +E Sbjct: 120 NTYVGFRNLPRVYVESAMVLGATRDRDLIRYVALPYALPSIAAGIRIAMGIAWMCLVAAE 179 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + T+GLG I V+L ++++ L +++ Sbjct: 180 MFG-----VSTSGLGYRIWSYYYLHKMEHVLLYMIVLGMLGLFIDKAF 222 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 14/210 (6%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + L + ++ SR L ++ PI+++++ IP L ++ F +V+F Sbjct: 43 SLLHFFLGIFAGMIIAMPLGMGMGWSRSLDKIIDPIVEVVRPIPPLAWIPFAIVWFGL-- 100 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG-WQKFWYLGVP 186 +A F +F V+ + + Y N+PR E + + Y+ +P Sbjct: 101 ------THESAGFIVFIGAVFPILINTYVGFRNLPRVYVESAMVLGATRDRDLIRYVALP 154 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 +++P + + ++M W +VA+EM V + G+G I + +L M+ Sbjct: 155 YALPSIAAGIRIAMGIAWMCLVAAEMFGVSTS-----GLGYRIWSYYYLHKMEHVLLYMI 209 Query: 247 TMLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 + + D+ + K+R+ T Sbjct: 210 VLGMLGLFIDKAFRSIIEDRLLKWRVGLTQ 239 >gi|238759169|ref|ZP_04620337.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia aldovae ATCC 35236] gi|238702585|gb|EEP95134.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia aldovae ATCC 35236] Length = 347 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ + +V I + A T +L+++ + Sbjct: 92 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 151 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 152 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 208 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 209 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 263 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 264 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 314 Score = 90.4 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + + P Sbjct: 54 PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 99 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + +T+ V+ + + Sbjct: 100 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 152 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 153 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 208 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 209 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 268 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 269 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 314 >gi|327439348|dbj|BAK15713.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Solibacillus silvestris StLB046] Length = 272 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 + + W +V + + RV+ + +I + Sbjct: 38 FILLVWQIASVFSEPMFLPSPYLTLVGAIEIASDGTLFLYMGYSFLRVLAGWTLGLLIAV 97 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P G+ IG + + +P + P F L + + L+++ T + Sbjct: 98 PFGLLIGTNKFVRALFEPVINFVRFIPPLAFITLFMLWFGIGEQSK----VFLIVYATFF 153 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I N + G + ND A S + ++ Y+++P PY TGA A G ++ A + Sbjct: 154 VITINTLTGVLSISNDKLLSAKSMGASKFQTLIYVVIPATIPYIFTGAKLAMGSSFMAIV 213 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +E+ + G+G I + + +G++++ ++R Sbjct: 214 GAEMVA------ANEGIGFMIWNARLYFKTDWIFVGLVVLGLMGFIMDRIF 258 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 103/242 (42%), Gaps = 15/242 (6%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 + L +LV I ++ + + +V + I D +L Y + LR+L+ Sbjct: 32 GMIGWLFILLVWQIASVFSEPMFLPSPYLTLVGAIEIASD-GTLFLYMGYSFLRVLAGWT 90 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 + LL + L ++ + + P+++ ++ IP L F+T +++F E + Sbjct: 91 LGLLIAVPFGLLIGTNKFVRALFEPVINFVRFIPPLAFITLFMLWFGIG--------EQS 142 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 +F I + + +T + + +I D ++S S +Q Y+ +P ++P + Sbjct: 143 KVFLIVYATFFVITINTLTGVLSISNDKLLSAKSMGASKFQTLIYVVIPATIPYIFTGAK 202 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++M + +V +EM+ + GIG I A I ++ + + F+ D+ Sbjct: 203 LAMGSSFMAIVGAEMVAANE------GIGFMIWNARLYFKTDWIFVGLVVLGLMGFIMDR 256 Query: 258 LL 259 + Sbjct: 257 IF 258 >gi|332529142|ref|ZP_08405106.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] gi|332041365|gb|EGI77727.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] Length = 298 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 95/236 (40%), Gaps = 18/236 (7%) Query: 38 GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLG 97 P DI + + L + + ++ R+ + I + V T+ SRR Sbjct: 71 NAHLLPAPSDIARTL-LAFGAQGLTTHVAASSARVFAGFAIGAVLAIVIGTVVGLSRRGE 129 Query: 98 MVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQS 157 +L P +++IP L ++ +++ E + + I + + + Sbjct: 130 ALLDPTFQALRAIPSLAWVPLLLLWLGID--------EASKVVLIAIGGFFPVYMGVASG 181 Query: 158 LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 ++ R L EV+R +RL + + +P ++P ++ + +S W F+VA+E+I Sbjct: 182 FRDVDRKLVEVARMYRLGPVELARRVLLPAALPAVLTGLRNGLSLAWMFMVAAELIA--- 238 Query: 218 TVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNKF 270 G+G + + +L A++ + + + D L R ++ W + + Sbjct: 239 ---ATKGLGYLLTDGREMGRPDIVLAAIVLLALLGKVTDTALAWLERRLLHWRDSY 291 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 10/184 (5%) Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I + + RV I +++ I +G +G + + P Q L Sbjct: 81 IARTLLAFGAQGLTTHVAASSARVFAGFAIGAVLAIVIGTVVGLSRRGEALLDPTFQALR 140 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 A P+ + PL++ + + +L+ G + + V +G EVA + Sbjct: 141 AIPSLAWVPLLLLWLGIDEASK----VVLIAIGGFFPVYMGVASGFRDVDRKLVEVARMY 196 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + R ++LP P +TG AW + +E+ + T GLG + + Sbjct: 197 RLGPVELARRVLLPAALPAVLTGLRNGLSLAWMFMVAAELIA------ATKGLGYLLTDG 250 Query: 547 TEKG 550 E G Sbjct: 251 REMG 254 >gi|134045438|ref|YP_001096924.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C5] gi|132663063|gb|ABO34709.1| binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis C5] Length = 253 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 81/208 (38%), Gaps = 9/208 (4%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + +I +++ RV++ IA IP+G+ +G+ I+ + +L Sbjct: 40 LLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLLDMSVELF 99 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL ++ + + ++ G + IL N I+G + P E A + Sbjct: 100 RPIPPLAWVPLALAWFGIGESSMH----FIIFIGAFFPILINTISGVKSVPVIMVEAAKT 155 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + + +++P P +TG G AW + +E+ GLG I Sbjct: 156 LGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSD-----AGLGYLIMY 210 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + VV ++I+ + L++ L Sbjct: 211 AYSLSKMNVVVASMIIIGIIGIILDKGL 238 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 78/204 (38%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L + + R+L I+ F L + +L +++ + IP L + Sbjct: 48 LGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLLDMSVELFRPIPPLAW 107 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + + +F F IF + + + + ++P + E +++ S Sbjct: 108 VPLALAWFGIGESSMH--------FIIFIGAFFPILINTISGVKSVPVIMVEAAKTLGGS 159 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + VP S P ++ + + W VVA+EM+ D G+G I A Sbjct: 160 TKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDA-----GLGYLIMYAYSL 214 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ +M+ + + + D+ L Sbjct: 215 SKMNVVVASMIIIGIIGIILDKGL 238 >gi|316934163|ref|YP_004109145.1| binding-protein-dependent transporter inner membrane component [Rhodopseudomonas palustris DX-1] gi|315601877|gb|ADU44412.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris DX-1] Length = 295 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 98/289 (33%), Gaps = 25/289 (8%) Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 S + S + + RT +L + R + + I ++ + + Sbjct: 1 MSLQSTVSSSAMGAPSMTRTSAAPARGGSRPPGKLAARLRATALALIVPLGLLLAWDLMV 60 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI---------------TMFRVVVLIIIASIIWIPV 404 W + +++ G I ++ RV +A++I IP+ Sbjct: 61 RWTGTRLVPPPSGIATMMWDFAFGGIYDDAYSASLPIHFWKSVQRVYGGFFLAALIGIPL 120 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 G+ IG P + + + P LL P + PL + + L+ G + I Sbjct: 121 GLMIGRIPLLRALLDPTLALLRPIPVTAWLPLSMIFFGLGPKS----AVFLVFLGAFYPI 176 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 L N + G + E A G + +R ++LP P G AW +V Sbjct: 177 LLNTVFGVKSVDVRLFEAAGMLGCNGPQLFRSVVLPAALPSIFNGLRLGASFAWILIVVG 236 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 E+ GLGA I + V+ G++I+ +R L Sbjct: 237 EM------TGVPEGLGAVIMDGRTLSRTDLVITGMIIIGITGFLSDRIL 279 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 86/213 (40%), Gaps = 17/213 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SLP + ++ R+ ++ L + + L +L P L +++ IP+ +L Sbjct: 93 ASLPIHFWKSVQRVYGGFFLAALIGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPL 152 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++++F +A+F +F + + + + ++ L E + +G Q Sbjct: 153 SMIFFGLG--------PKSAVFLVFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCNGPQ 204 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P + + + S W +V EM V + G+G+ I Sbjct: 205 LFRSVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPE------GLGAVIMDGRTLSRT 258 Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268 ++ M+ + FL D++L + WS Sbjct: 259 DLVITGMIIIGITGFLSDRILVMLSNYFLRWSP 291 >gi|261402938|ref|YP_003247162.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus vulcanius M7] gi|261369931|gb|ACX72680.1| binding-protein-dependent transport systems inner membrane component [Methanocaldococcus vulcanius M7] Length = 258 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 18/223 (8%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 I + +I I++ RV+ +AS + IP+GI +G +++ +LL Sbjct: 45 LIHPNQGILGTGNLIENTLISIKRVLSGFFLASAVAIPLGILMGHYKTVNNLFDTIIELL 104 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL ++ ++ + + F IL N I+G + P E A + Sbjct: 105 RPIPPLAWVPLSLAWFGLGEMSMIFIIFIGAFFP----ILINTISGVKSVPTPLIEAALT 160 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 G +++P P +TG G AW + +E+ GLG I Sbjct: 161 LGAKGRDILLKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPS-----SNAGLGYLIMY 215 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR---------FLWHPLYL 579 + V+ ++I+ L L+R F+W + Sbjct: 216 AYSISRMDVVIACMIIIGIIGLILDRGLRYIEDKYFVWRKMMK 258 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 83/204 (40%), Gaps = 13/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L +L + + R+LS ++ L + + + I+++++ IP L + Sbjct: 53 LGTGNLIENTLISIKRVLSGFFLASAVAIPLGILMGHYKTVNNLFDTIIELLRPIPPLAW 112 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + ++ +F E++ IF IF + + + + ++P L E + + Sbjct: 113 VPLSLAWFGLG--------EMSMIFIIFIGAFFPILINTISGVKSVPTPLIEAALTLGAK 164 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 G + +P S P ++ + + W VVA+EM+ + G+G I A Sbjct: 165 GRDILLKVVIPASSPSILTGLRVGAGIAWMCVVAAEMLPSSNA-----GLGYLIMYAYSI 219 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ M+ + + + D+ L Sbjct: 220 SRMDVVIACMIIIGIIGLILDRGL 243 >gi|294792570|ref|ZP_06757717.1| ABC transporter, permease protein [Veillonella sp. 6_1_27] gi|294456469|gb|EFG24832.1| ABC transporter, permease protein [Veillonella sp. 6_1_27] Length = 250 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ L + G + ++ + ++ R + II+ + Sbjct: 12 IAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDVADSLVRFFIGYIISVV 71 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +G+ +G+ I + I P Q++ + P +V +++ Sbjct: 72 AGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + +L + ++ + +VA +F I I+LP +FP +G A G AW Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + E+ TGLG I + +++ +L + L L+ Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 94/237 (39%), Gaps = 15/237 (6%) Query: 22 LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +A L+ +I L P ++ + L + + + +R +IS+ Sbjct: 11 FIAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDVADSLVRFFIGYIISV 70 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + + PI+ +++ I + +L F V++F + AI Sbjct: 71 VAGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + S ++ NI +V+R+F + + + + +P PG+ + +++ Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 W F+V EM+ G+G I ++ A+LT+ V L D Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233 >gi|39935744|ref|NP_948020.1| putative ABC transporter permease [Rhodopseudomonas palustris CGA009] gi|192291331|ref|YP_001991936.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Rhodopseudomonas palustris TIE-1] gi|39649597|emb|CAE28119.1| putative permease protein, subunit of ABC transporter [Rhodopseudomonas palustris CGA009] gi|192285080|gb|ACF01461.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 294 Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 25/260 (9%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--- 385 F +L + R + + I ++ + + W + +++ G I Sbjct: 29 RQFAKLTARLRTTALALIVPLGLLLVWDLMVRWTGTRLVPPPSGVATMMWDFAFGGIYDD 88 Query: 386 ------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ RV +A+++ IP+G+ IG P + + + P LL P + Sbjct: 89 AYSGSLPIHFWKSVQRVYGGFFLAALLGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAW 148 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + + L+ G + IL N + G + E A +G + Sbjct: 149 LPLSMIFFGLGPKS----AVFLVFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCSGPQL 204 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 +R ++LP P G AW +V E+ GLGA I + Sbjct: 205 FRSVVLPAALPSIFNGLRLGASFAWILIVVGEM------TGVPEGLGAVIMDGRTLSRTD 258 Query: 554 EVVLGVLIMCCFVLALNRFL 573 V+ G++I+ +R L Sbjct: 259 LVITGMIIIGITGFLSDRIL 278 Score = 106 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 86/213 (40%), Gaps = 17/213 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SLP + ++ R+ ++ L + + L +L P L +++ IP+ +L Sbjct: 92 GSLPIHFWKSVQRVYGGFFLAALLGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPL 151 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++++F +A+F +F + + + + ++ L E + SG Q Sbjct: 152 SMIFFGLG--------PKSAVFLVFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCSGPQ 203 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P + + + S W +V EM V + G+G+ I Sbjct: 204 LFRSVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPE------GLGAVIMDGRTLSRT 257 Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268 ++ M+ + FL D++L + WS Sbjct: 258 DLVITGMIIIGITGFLSDRILVSLSNYFLRWSP 290 >gi|317049234|ref|YP_004116882.1| binding-protein-dependent transporter inner membrane component [Pantoea sp. At-9b] gi|316950851|gb|ADU70326.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 371 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80 LL + ++ L Q + I ++ + L A T +L+A++ + Sbjct: 116 LLGMPAPVALVVFALIAWQIASPAMGIATLISLVLIGAIGAWSQAMVTLALVLTALLFCI 175 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 176 IIGLPLGIWLARSERAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 232 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E S SF S Q + + +P +MP ++ + ++ Sbjct: 233 A-----LPPIVRLTILGIKQVPADLIEASESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 287 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 288 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 338 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ + T ++ + +G + + V+ ++ Sbjct: 115 LLLGMPAPVALVVFALIAWQIASPAMGIATLISLVLIGAIGAWSQAMVTLALVLTALLFC 174 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 II +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 175 IIIGLPLGIWLARSERAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 230 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G P D E + SF + + + LP P + G A Sbjct: 231 IFALPPIVRLTILGIKQVPADLIEASESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 290 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 291 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 338 >gi|330981307|gb|EGH79410.1| binding-protein dependent transport system inner membrane protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 282 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 22/272 (8%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRT 68 +R + L+ ++I ++ +++ + P +IV + L +L ++ S + Sbjct: 26 QRYRAPLKGLVVPAVIIVLLEMIVRIGWLPAYQMPAPSEIVLTLR-DLADGALWKHISAS 84 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LR+LS I V+A SR L P ++SIP + ++ L Sbjct: 85 LLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPS--------LAWVALLL 136 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 + E + I I + + + ++ I R L EV + + LS ++ + +P + Sbjct: 137 LWLGIGETSKIVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAA 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +PGL + MS W F+VA+E+I G+G ++ + +L A++ + Sbjct: 197 LPGLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIIL 250 Query: 249 LGVIFLYDQLLF---RPMIVWSNKFRLERTTG 277 + L D LL + + W + F + G Sbjct: 251 ATLGKLSDGLLASLEKRFLAWRDTFNGQSREG 282 Score = 101 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 74/189 (39%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ I + + + W+G + ++P L + P+ + L++ + Sbjct: 83 ASLLRVLSGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVALLLLWLGIG 142 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +L+ G + + N +A EV + ++ +R R I+LP P Sbjct: 143 ETSK----IVLIAIGAFFPVYLNGVAAIRGIDRKLVEVGQMYGLSRYRLTRRILLPAALP 198 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG + +W + +E+ + T GLG +++ E V+ ++I+ Sbjct: 199 GLFTGLRSGMSLSWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIILAT 252 Query: 565 FVLALNRFL 573 + L Sbjct: 253 LGKLSDGLL 261 >gi|238796648|ref|ZP_04640154.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia mollaretii ATCC 43969] gi|238719379|gb|EEQ11189.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia mollaretii ATCC 43969] Length = 365 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ + +V I + A T +L+++ + Sbjct: 110 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 169 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 170 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 226 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 227 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 281 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 282 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 332 Score = 90.8 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + + P Sbjct: 72 PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 117 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + +T+ V+ + + Sbjct: 118 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 170 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 171 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 226 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 227 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 286 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 287 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 332 >gi|254360698|ref|ZP_04976847.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261491837|ref|ZP_05988416.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494692|ref|ZP_05991172.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091238|gb|EDN73243.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261309657|gb|EEY10880.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312492|gb|EEY13616.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 247 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + ++ R+ V ++ A +I +P+G+ +GF H+ P QLL + P+ Sbjct: 52 GEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRMISPLSWMPI 111 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V + L + L+ F T W ++ + +G + + ++ T Sbjct: 112 IVMLLGVGDL----PIYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSATRKELLCK 167 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I++P I + +TG A G AW + E+ GLG +I ++ ++ ++ E++ Sbjct: 168 IVVPAITGHVLTGLRVAVGIAWVVLVPCEMLG------VNQGLGYFILDTRDRLAYSELM 221 Query: 557 LGVLIMCCFVLALNRFL 573 ++I+ AL+ + Sbjct: 222 AVIIIIGLIGWALDSLI 238 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 79/221 (35%), Gaps = 14/221 (6%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 + P + + + + + R+ ++ +L+ L S+ L M Sbjct: 32 MASMLAPAKTWESFTWLISSGEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEM 91 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 + P +++ I L ++ V+ +L F + + VW++ S + Sbjct: 92 LCTPSFQLLRMISPLSWMPIIVMLLGVG--------DLPIYFLLAFATVWSLIISTTSGV 143 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 +I ++ R + + + VP ++ + +++ W +V EM+ V Sbjct: 144 KSIDPQWLQLGRVMSATRKELLCKIVVPAITGHVLTGLRVAVGIAWVVLVPCEMLGVNQ- 202 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G +I ++ ++ + + + D L+ Sbjct: 203 -----GLGYFILDTRDRLAYSELMAVIIIIGLIGWALDSLI 238 >gi|238755713|ref|ZP_04617047.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia ruckeri ATCC 29473] gi|238706080|gb|EEP98463.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia ruckeri ATCC 29473] Length = 360 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q +T+ + +V + + A T +L+++ + Sbjct: 105 LLGMPAPIAILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAMVTLALVLTSLFFCI 164 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 165 LIGLPLGIWLARSNNAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 221 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 222 A-----LPPIVRLTILGIKQVPADLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 276 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 277 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 327 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + + P Sbjct: 67 PLDSWV------THGIDWVVLHFRPVFQGIRVPVDFILSGFQHMLLGMPAPI-------- 112 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ +V + +T+ V+ + + Sbjct: 113 ---AILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAM----VTLALVLTSLFFCIL 165 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 166 IGLPLGIWLARSNNAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 221 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 222 ALPPIVRLTILGIKQVPADLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 281 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 282 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 327 >gi|70733776|ref|YP_257416.1| taurine ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348075|gb|AAY95681.1| taurine ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 279 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ + + A + IPVGI IG + P + P + PL+V Sbjct: 85 AASLQRIGLALGFAVLTAIPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVIWCGI 144 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ LL+ I G A S T + R++ILP Sbjct: 145 GELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVILPSAL 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 201 PDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIA 254 Query: 564 CFVLALN---RFLWHPLYLY 580 A+ R L L + Sbjct: 255 LIAFAMEMGLRALQRKLVPW 274 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 87/212 (41%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A+ ++L +R VL P+++ + IP L +L Sbjct: 78 STLWQHLAASLQRIGLALGFAVLTAIPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPL 137 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ EL+ + I+ + + + + + ++S + Q Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQ 189 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 190 LIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 244 DVVVLGILVIALIAFAMEMGLRALQRKLVPWH 275 >gi|312960707|ref|ZP_07775212.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas fluorescens WH6] gi|311284365|gb|EFQ62941.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas fluorescens WH6] Length = 273 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 110/280 (39%), Gaps = 23/280 (8%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLD 57 L ++ P R +P L +I ++ + + + P +I + L Sbjct: 8 LPHVTPTAPHRSAWPRRLKGLVLPALILLVLEIAVRVGWLPSYQMPAPSEIAVTLS-ELA 66 Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 +L ++ S + R+L I V+A SR L P ++SIP L ++ Sbjct: 67 EGALWKHISASLGRVLLGFAIGAGLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVP 126 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 +++ E + I I + + + ++ +I R L EV + + S Sbjct: 127 LLLLWLGID--------ETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFSRR 178 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + + +P ++PGL + +S W F+VA+E+I G+G ++ + Sbjct: 179 RLVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIA------ATKGLGYLLSDGRETSR 232 Query: 238 LLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFRLER 274 +L A++ + + + D L L + + W + F + Sbjct: 233 PDIVLAAIIVLALLGKVTDGLLAALEKRCLAWRDTFTGQE 272 Score = 111 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 96/264 (36%), Gaps = 16/264 (6%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 + + + P + +R+ ++ +V +A+ + W + Sbjct: 1 MSSKVQALPHVTPTAPHRSAWPRRLKGLVLPALILLVLEIAVRVGWLPSYQMPAPSEIAV 60 Query: 376 VLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 L + G + ++ RV++ I + + + W+G + ++P L + P Sbjct: 61 TLSELAEGALWKHISASLGRVLLGFAIGAGLALVFAAWVGLSREAEAYLEPTFAGLRSIP 120 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + + PL++ + + +L+ G + + N +A EV + + Sbjct: 121 SLAWVPLLLLWLGIDETSK----IVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFS 176 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 R R I+LP P TG + AW + +E+ + T GLG +++ E Sbjct: 177 RRRLVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIA------ATKGLGYLLSDGRET 230 Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573 V+ ++++ + L Sbjct: 231 SRPDIVLAAIIVLALLGKVTDGLL 254 >gi|283784185|ref|YP_003364050.1| taurine ABC transporter permease [Citrobacter rodentium ICC168] gi|282947639|emb|CBG87194.1| taurine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 277 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 106/277 (38%), Gaps = 21/277 (7%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI-------GIAWQSIGY 366 K + +++ +P + S ++ ++ ++W + G Q + Sbjct: 7 DKPRQRALKLKWRWPLSRQLTLSLGTLAVIVSVWWAVATLQLVSPLFLPPPGQVLQKLWV 66 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 I + D + ++ R+V+ ++ A+I+ IPVGI +G P I + P +L Sbjct: 67 IAGPQGFMD-ATLWQHLAASLTRIVLALLAAAIVGIPVGIAMGLSPAIRGVLDPIIELYR 125 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P + PL+V + LL+ + + +AG + A S Sbjct: 126 PVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRLRAAQSL 181 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + + ++ILPG P +TG G W+ + +E+ + T GLG + + Sbjct: 182 GASRSQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 235 Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 E + V+ G+ ++ L R L L + Sbjct: 236 GEFLATDVVLAGIAVIAVIAFMLELGLRALQRRLTPW 272 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 99/248 (39%), Gaps = 20/248 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77 + + + + L P ++ + P +L Q+ + + R++ A++ Sbjct: 35 VIVSVWWAVATLQLVSPLFLPPPGQVLQKLWVIAGPQGFMDATLWQHLAASLTRIVLALL 94 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 + + S + VL PI+++ + +P L +L V++F E + Sbjct: 95 AAAIVGIPVGIAMGLSPAIRGVLDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 146 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + + S + + + ++S S Q W++ +P ++P ++ + Sbjct: 147 KILLIYLAIFAPVAMSALAGVKSAQQVRLRAAQSLGASRSQVLWFVILPGALPEILTGLR 206 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + + GW +VA+E+I G+G + A E ++ A + ++ VI + Sbjct: 207 IGLGVGWSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAVIAFMLE 259 Query: 258 LLFRPMIV 265 L R + Sbjct: 260 LGLRALQR 267 >gi|222055625|ref|YP_002537987.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221564914|gb|ACM20886.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 300 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 81/202 (40%), Gaps = 10/202 (4%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V ++ ++ ++ +V ++A I +P+G+ IG+R + + PF ++L Sbjct: 93 VLELFVAELPDMLKGLVNSLILLVSGYLLALITGVPLGLLIGWRGRLFRAVNPFTKVLGP 152 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P V+ P ++ + + ++ G W I N + G P + A + Sbjct: 153 IPPIVYIPYAIALLPSFRA----ASIFVIFIGAFWPIFINTVNGVFNIPKGLIDSARVLN 208 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + +ILPG P TGA A + +E+ +G+G Y+ Sbjct: 209 LRETTLLFRVILPGAMPSICTGATLALVFSLVLLTAAELIG------ANSGIGWYVKNFA 262 Query: 548 EKGSFPEVVLGVLIMCCFVLAL 569 + + V++G++ + V + Sbjct: 263 DFADYQRVIVGIIFISLVVTGI 284 Score = 97.7 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 89/236 (37%), Gaps = 18/236 (7%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPI-TLDVHSLPQYA---SRTTLRMLSAM 76 D+ + + + ++ L+ G P+ L V LP + + ++S Sbjct: 60 DVASIIYLFLLLWFLVTGKSALLDKMLFPQPEPVLELFVAELPDMLKGLVNSLILLVSGY 119 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +++L+ L RL + P ++ IP + ++ + + Sbjct: 120 LLALITGVPLGLLIGWRGRLFRAVNPFTKVLGPIPPIVYIPYAIALL--------PSFRA 171 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 A+IF IF W + + + NIP+ L + +R L + + +P +MP + Sbjct: 172 ASIFVIFIGAFWPIFINTVNGVFNIPKGLIDSARVLNLRETTLLFRVILPGAMPSICTGA 231 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 +++ + A+E+I GIG Y+ D ++ ++ + V+ Sbjct: 232 TLALVFSLVLLTAAELIGANS------GIGWYVKNFADFADYQRVIVGIIFISLVV 281 >gi|264676297|ref|YP_003276203.1| taurine transporter permeaseprotein tauC [Comamonas testosteroni CNB-2] gi|262206809|gb|ACY30907.1| taurine transport system permeaseprotein tauC [Comamonas testosteroni CNB-2] Length = 285 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 97/267 (36%), Gaps = 10/267 (3%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 P + R + ++ P L L ++L + V VA + Sbjct: 15 EPAAAPASHGPRKMKLLHPVEPRVRLFLGVAFFALFLLFWTFLTVAGIVAPHFLASPLQA 74 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + + + +T++RV+ ++A++I +P+GI +G I + +PF Sbjct: 75 LKAAWKLFTEFGFLNDVGMTVWRVMGGFVLAAVIAVPLGIAMGAYKPIEAIFEPFVSFAR 134 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 PA+ F PL++ V ++ G + + V+ D E A + Sbjct: 135 YLPASAFIPLLIMWVGIGEAQKLS----IIFIGCFFQLTLMVMMIVGNARRDLVEAAYTL 190 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 T R ++LPG P G W +V+E+ +G+G I +S Sbjct: 191 GSTDSSVIRRVLLPGAAPEIAEALRQVLGLGWTYVVVAELIG------AASGIGHMIMDS 244 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573 + ++ G++I+ L + Sbjct: 245 QALMATDNIIAGIVIIGLVGLTSDLLF 271 Score = 98.1 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 80/247 (32%), Gaps = 15/247 (6%) Query: 14 RIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRM 72 R+F + F+L + + + P + T R+ Sbjct: 39 RLFLGVAFFALFLLFWTFLTVAGIVAPHFLASPLQALKAAWKLFTEFGFLNDVGMTVWRV 98 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 + V++ + + + + P + + +P F+ +++ K+ Sbjct: 99 MGGFVLAAVIAVPLGIAMGAYKPIEAIFEPFVSFARYLPASAFIPLLIMWVGIGEAQKLS 158 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 IF + +T + + N RDL E + + + + +P + P + Sbjct: 159 --------IIFIGCFFQLTLMVMMIVGNARRDLVEAAYTLGSTDSSVIRRVLLPGAAPEI 210 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + + GW +VV +E+I GIG I + I+ ++ + V Sbjct: 211 AEALRQVLGLGWTYVVVAELIGAAS------GIGHMIMDSQALMATDNIIAGIVIIGLVG 264 Query: 253 FLYDQLL 259 D L Sbjct: 265 LTSDLLF 271 >gi|229826018|ref|ZP_04452087.1| hypothetical protein GCWU000182_01382 [Abiotrophia defectiva ATCC 49176] gi|229789760|gb|EEP25874.1| hypothetical protein GCWU000182_01382 [Abiotrophia defectiva ATCC 49176] Length = 266 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 78/209 (37%), Gaps = 10/209 (4%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ + + I+++RV+V +IA++ + +G+++G+ + +P + Sbjct: 52 AFLTSFVVPVGKYTMQVHIAISLYRVLVAFLIATVAGVFLGVFMGYSRTFEAIFKPLFEF 111 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + P + P+ + + ++ G+ +I N G A Sbjct: 112 VRPIPPLAWIPMSILWFGIGDESKW----FIIFLGSFTFITVNTYDGTKNVDKTLMGAAR 167 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + + ++LP PY G A W+A + +E+ G+G I Sbjct: 168 MLGANERQVFTRVVLPSAVPYIFAGLQIAITAGWSAVVAAEMIRSDE------GVGWLIV 221 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G+ ++++G++ + L + Sbjct: 222 MGMSTGNTIQIMVGIVAIGAIGFILATLM 250 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 103/252 (40%), Gaps = 21/252 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV----HSLPQYASRTTLRMLSAMV 77 ++ F++V ++ I+ + V +++ + + + R+L A + Sbjct: 23 VIGFLVVWELVARFTGAKMFLPPASVIIQAFLTSFVVPVGKYTMQVHIAISLYRVLVAFL 82 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 I+ + SR + P+ + ++ IP L ++ ++++F K Sbjct: 83 IATVAGVFLGVFMGYSRTFEAIFKPLFEFVRPIPPLAWIPMSILWFGIGDESKW------ 136 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 F IF +T + Y N+ + L +R + Q F + +P ++P + + Sbjct: 137 --FIIFLGSFTFITVNTYDGTKNVDKTLMGAARMLGANERQVFTRVVLPSAVPYIFAGLQ 194 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++++ GW VVA+EMI G+G I + + + + I+ ++ + + F+ Sbjct: 195 IAITAGWSAVVAAEMI------RSDEGVGWLIVMGMSTGNTIQIMVGIVAIGAIGFILAT 248 Query: 258 L---LFRPMIVW 266 L L R + W Sbjct: 249 LMSALERRLCRW 260 >gi|282849631|ref|ZP_06259015.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|282580568|gb|EFB85967.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] Length = 250 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 V+ L + G + ++ + ++ R + II+ + Sbjct: 12 VAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISVV 71 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +G+ +G+ I + I P Q++ + P +V +++ Sbjct: 72 AGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + +L + ++ + +VA +F I I+LP +FP +G A G AW Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + E+ TGLG I + +++ +L + L L+ Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 94/237 (39%), Gaps = 15/237 (6%) Query: 22 LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +A L+ ++ + P ++ + L + + + +R +IS+ Sbjct: 11 FVAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISV 70 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + + PI+ +++ I + +L F V++F + AI Sbjct: 71 VAGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + S ++ NI +V+R+F + + + + +P PG+ + +++ Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 W F+V EM+ G+G I ++ A+LT+ V L D Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233 >gi|237730337|ref|ZP_04560818.1| taurine transporter subunit [Citrobacter sp. 30_2] gi|226905876|gb|EEH91794.1| taurine transporter subunit [Citrobacter sp. 30_2] Length = 276 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 104/273 (38%), Gaps = 19/273 (6%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFT 372 R V+ + +P + S ++ +L ++W + + Q + ++ Sbjct: 9 PRRQRVLNWRWPFSRQITLSLGTLAVILAVWWTVAALQLISPLFLPPPGQVLQKLIVIAG 68 Query: 373 YQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 Q + ++ R+V+ ++ A ++ +PVGI +G P + + P +L P Sbjct: 69 PQGFMDATLWQHLAASLTRIVIALLAAVLLGVPVGIAMGLSPTMRGILDPIIELYRPVPP 128 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL+V + LL+ + + +AG + A S + Sbjct: 129 LAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRVRAAQSLGASR 184 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + ++ILPG P +TG G W+ + +E+ + T GLG + + E Sbjct: 185 AQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFL 238 Query: 551 SFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + V+ G+ ++ L R L L + Sbjct: 239 ATDVVLAGIAVIAVIAFILELGLRALQRRLTPW 271 Score = 106 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 101/253 (39%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77 + + + + L P ++ + P +L Q+ + + R++ A++ Sbjct: 34 VILAVWWTVAALQLISPLFLPPPGQVLQKLIVIAGPQGFMDATLWQHLAASLTRIVIALL 93 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++L S + +L PI+++ + +P L +L V++F E + Sbjct: 94 AAVLLGVPVGIAMGLSPTMRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 145 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + + S + + + ++S S Q W++ +P ++P ++ + Sbjct: 146 KILLIYLAIFAPVAMSALAGVKSAQQVRVRAAQSLGASRAQVLWFVILPGALPEILTGLR 205 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 + + GW +VA+E+I G+G + A + +L + + + F+ + Sbjct: 206 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFILEL 259 Query: 257 --QLLFRPMIVWS 267 + L R + W Sbjct: 260 GLRALQRRLTPWH 272 >gi|15888234|ref|NP_353915.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15155886|gb|AAK86700.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 302 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 19/246 (7%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 S R+F ++ ++++ I+++ + T I + L + A T Sbjct: 58 SERLFIETPWIITMLVILAIVHLAGRSFKITGG----TAISLFMIGAVGLWRDAMTTLSI 113 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 + A +I+++ L +S RL ++ P+LD+MQ++P +L VV F GKV Sbjct: 114 VTIATLIAIVIGLPLGILMGRSERLQRLINPVLDVMQTLPSFVYLIPVVVIFG---IGKV 170 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 G I+AI + + + R++ E + +F S QK + + +P ++P Sbjct: 171 PGLIAVVIYAIP-----PVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALPT 225 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 ++ + ++ VV + M+ VG G+G + AI Q ++ + Sbjct: 226 IMTGINQTIMMALAMVVVASMVGVG-------GLGKNVLQAINNQFFTVGFLNGFALVAI 278 Query: 252 IFLYDQ 257 ++D+ Sbjct: 279 AIMFDR 284 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 11/231 (4%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 + + + G +++ G + + T+ V + +IA +I Sbjct: 65 TPWIITMLVILAIVHLAGRSFKITGGTAISLFMIGAVGLWRDAMTTLSIVTIATLIAIVI 124 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 +P+GI +G + I P ++ P+ V+ VV + + ++ Sbjct: 125 GLPLGILMGRSERLQRLINPVLDVMQTLPSFVYLIPVVVIFGIG----KVPGLIAVVIYA 180 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 ++ G + E A +F + + + LP P +TG A Sbjct: 181 IPPVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALPTIMTGINQTIMMALAM 240 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +V+ + G GLG + ++ F L + + +R Sbjct: 241 VVVASMVGVG-------GLGKNVLQAINNQFFTVGFLNGFALVAIAIMFDR 284 >gi|254455125|ref|ZP_05068560.1| glycine betaine/proline ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198263535|gb|EDY87807.1| glycine betaine/proline ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 628 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 84/576 (14%), Positives = 185/576 (32%), Gaps = 43/576 (7%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 F +R +PN+ + L + + + + + L A +T Sbjct: 64 FYGKRRWPNLGPIPWTALTAAVTVLCYYLGGWRLALLGFITFMWTAL--MGQWDIAMQTI 121 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 + + ++ + A KS R+ V+ P+L ++Q++P +L V++F G Sbjct: 122 SVLAVTVPLAFIIGLSLGIAAWKSARVDAVIKPVLSVLQTLPFFTYLLPAVIFFKV---G 178 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 GA ++AI M L + ++ E + S +Q ++ +P + Sbjct: 179 PTAGAVATTVYAIP-----PMILMTTLGLQKVSPEVVEAGKMSGCSKFQMLRHVYIPSAR 233 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 ++ + ++ S +VV + +PG+G+ + + L +T++ Sbjct: 234 TEILVGVNQ-------VIMLSLAMVVLTAFVGMPGLGAKLLQMLGSFKLGRSFEVGVTIV 286 Query: 250 GVIFLYDQLLFRPMIVWSNKF--------RLERTTGIYPADSWVLYLFRKTNFLRFIGYS 301 + D++ ++ F R + + + R+ IG Sbjct: 287 LLAVTLDRMSKAWVVKQPEHFERGTAFWVRHKMALIGLGLVVLLTMIAREIPIFAEIGRG 346 Query: 302 SWNFFSPLSNN-------VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 + + + T G +R L N +S + Sbjct: 347 QDFSIGKFLDVQIKAFLDIGWVKATTGFLRAFLNVQVLIPFRNFMLSIPTPAMILLIAAF 406 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 + GY + F+ + IT++ V +I+A+II +PV I Sbjct: 407 ALALAGRRQAGYALIFFSLVALSGWWDRAIITLYSVTSAVILAAIIGLPVAIMASRSDRG 466 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 S + FP+ V+ + ++ + ++ ++ I G Sbjct: 467 SRWMLLVCDTFQTFPSFVYLLPAIMLFGIT----DIAVIFSIVIFATVPLIRYTIEGLRT 522 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P + E A T ++ + LP P G A A+ I++ Sbjct: 523 VPPEMTEAADMAGATRFQKLVNVQLPLALPTMAIGFNQAIMFAFFMVIIAAFIGTQD--- 579 Query: 535 RTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 LG + + + + + + L + Sbjct: 580 ----LGQELQRTLAGTDLGKNFVLGICVSLMALTFD 611 Score = 86.9 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 78/200 (39%), Gaps = 15/200 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 A T + SA++++ + A +A++S R ++ + D Q+ P +L ++ Sbjct: 432 WDRAIITLYSVTSAVILAAIIGLPVAIMASRSDRGSRWMLLVCDTFQTFPSFVYLLPAIM 491 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 F ++A IF+I + + L +P ++ E + + +QK Sbjct: 492 LFGI--------TDIAVIFSIVIFATVPLIRYTIEGLRTVPPEMTEAADMAGATRFQKLV 543 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + ++ +F V+ + I D +G + + DL Sbjct: 544 NVQLPLALPTMAIGFNQAIMFAFFMVIIAAFIGTQD-------LGQELQRTLAGTDLGKN 596 Query: 242 LYAMLTMLGVIFLYDQLLFR 261 + + + +D + + Sbjct: 597 FVLGICVSLMALTFDLTIMK 616 >gi|251795736|ref|YP_003010467.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247543362|gb|ACT00381.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length = 272 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 12/255 (4%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFW-FCVVCGVAIGIAWQSIGYIVNHFT-YQDVLY 378 I+ + N +L V +L + W F + G A ++ Sbjct: 14 RRIKLNVSLNIRKLFKQSIVLILLALVWQFAPLAGFADPAFLPPFSDVIQALWNLILSGE 73 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + +M R + +A +I IP+G+ IG+ P + P +L A P+ + Sbjct: 74 LFHHFAASMIRSLSGFALALVIAIPLGLAIGWYPLARELLNPVMELFRNTAALALLPVFM 133 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + +++F W IL N IA + A S +++ ++ + +I Sbjct: 134 LILGIGETSK----IAIVLFACTWPILLNTIAAVGNVDPLLIKSARSMNLSSFKLFIKVI 189 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P TG A GA I +E+ GLG I S PE+ G Sbjct: 190 LPASVPTIFTGIRMAGTGAILVLIAAEMVG------AKEGLGYLITYSQYNFQIPEMFAG 243 Query: 559 VLIMCCFVLALNRFL 573 +L + L +N+ L Sbjct: 244 ILTIALLGLLINQGL 258 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 100/258 (38%), Gaps = 18/258 (6%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLR 71 R++F L+ LV + P V L + L + + + +R Sbjct: 25 RKLFKQSIVLILLALVWQFAPLAGFADPAFLPPFSDVIQALWNLILSGELFHHFAASMIR 84 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 LS ++L+ +L P++++ ++ L L ++ Sbjct: 85 SLSGFALALVIAIPLGLAIGWYPLARELLNPVMELFRNTAALALLPVFMLILGIG----- 139 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 E + I + + W + + ++ N+ L + +RS LS ++ F + +P S+P Sbjct: 140 ---ETSKIAIVLFACTWPILLNTIAAVGNVDPLLIKSARSMNLSSFKLFIKVILPASVPT 196 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + M+ +G ++A+EM+ + G+G I + + + +LT+ + Sbjct: 197 IFTGIRMAGTGAILVLIAAEMVGAKE------GLGYLITYSQYNFQIPEMFAGILTIALL 250 Query: 252 IFLYDQ---LLFRPMIVW 266 L +Q +L R + W Sbjct: 251 GLLINQGLSVLERKLSKW 268 >gi|299149362|ref|ZP_07042419.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_23] gi|298512549|gb|EFI36441.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_23] Length = 275 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L + I+ + + I ++ + L + +T +LS+ ++L Sbjct: 41 LFGIPFYLTILVLAAIAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +F A S R +L PILD+MQ++P +L V++F G V G IF Sbjct: 101 IFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFFGL---GTVPGVFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 85.4 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 85/236 (36%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + V IAW G ++ FT +L + +G T+ V+ + Sbjct: 39 HILFGIPFYLTILVLAAIAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I +P+GIW P ++P L+ PA V+ V + + Sbjct: 99 ALIFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFFGLGTVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|238790131|ref|ZP_04633908.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia frederiksenii ATCC 33641] gi|238721800|gb|EEQ13463.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia frederiksenii ATCC 33641] Length = 357 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q +T+ + +V + + A T +L+++ + Sbjct: 102 LLGMPAPIAILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAMVTLALVLTSLFFCI 161 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 162 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 219 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 273 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGMGIVILAIILDRL 324 Score = 90.8 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + + P Sbjct: 64 PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPI-------- 109 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ +V + +T+ V+ + + Sbjct: 110 ---AILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAM----VTLALVLTSLFFCIL 162 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 163 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 219 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 278 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGMGIVILAIILDRL 324 >gi|325290856|ref|YP_004267037.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324966257|gb|ADY57036.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 262 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 76/204 (37%), Gaps = 11/204 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF-RPHISSKIQPFAQLLAAFP 429 + + +++ R V+ + A II IP+G+ +G ++P L F Sbjct: 53 IGLAEDGLIFGHILVSLERTVLGFLFAIIIGIPLGVLLGGGFKTFERIVKPVLFFLGQFN 112 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 FP+ + + ++ ++ + + W ILFN I G + + S Sbjct: 113 PFSLFPIFILILGIGEVSK----VTMIFWVSLWPILFNTITGVREVDPLLIKSSKSMGAK 168 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 +R ++ P PY TG + G A+ I +E+ + GLG + + Sbjct: 169 RLTIFRKVVFPSSLPYIFTGIKMSSGIAFFMLIAAEMIG------ASRGLGWLVWNAQTN 222 Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573 P + +++ L +N Sbjct: 223 YQIPVLYAATVVISLLGLVINGLF 246 Score = 103 bits (258), Expect = 8e-20, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 82/234 (35%), Gaps = 18/234 (7%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK-SRRLGMVLV 101 P I+ + + + + + R + + +++ L + ++ Sbjct: 43 AAPSTIITTLIGLAEDGLIFGHILVSLERTVLGFLFAIIIGIPLGVLLGGGFKTFERIVK 102 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+L + ++ E++ + IF +W + F+ + + Sbjct: 103 PVLFFLGQFNPFSLFPIFILILGIG--------EVSKVTMIFWVSLWPILFNTITGVREV 154 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L + S+S F + P S+P + + MS +F ++A+EMI Sbjct: 155 DPLLIKSSKSMGAKRLTIFRKVVFPSSLPYIFTGIKMSSGIAFFMLIAAEMIGAS----- 209 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRL 272 G+G + A + + A + + + + + +LL R ++ W + Sbjct: 210 -RGLGWLVWNAQTNYQIPVLYAATVVISLLGLVINGLFRLLERKIVKWKDSVSF 262 >gi|266621607|ref|ZP_06114542.1| taurine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288866705|gb|EFC99003.1| taurine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 266 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 10/208 (4%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ + + ++ R+ + ++ + I IP GI IG+ ++ + Sbjct: 51 RFVKTFEKPINGYMIFGHILASLKRIFLALLFSLGIGIPFGILIGWNKTFNAIFGTLFEF 110 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + P + PL+V +++ GT ++ N G + +V Sbjct: 111 IRPIPPIAWLPLIVMWFGIG----EFPKVIIVFIGTFTPVVVNTATGIRLVEPLYLDVGR 166 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 FH + I LP G TA G + +E+ GLG I Sbjct: 167 MFHANDRKLLTEIALPSAMQSIFAGFRTATSGGLMVVLAAEMIG------AKAGLGFLIT 220 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + P +++G++++ ++ F Sbjct: 221 RGQDAFDVPLIMVGMIVIAIVGTVISIF 248 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 81/214 (37%), Gaps = 17/214 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R+ A++ SL + L ++ + + + ++ IP + +L V++ Sbjct: 67 GHILASLKRIFLALLFSLGIGIPFGILIGWNKTFNAIFGTLFEFIRPIPPIAWLPLIVMW 126 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F E + +F + + + + +V R F + + Sbjct: 127 FGIG--------EFPKVIIVFIGTFTPVVVNTATGIRLVEPLYLDVGRMFHANDRKLLTE 178 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P +M + + SGG V+A+EMI G+G I D+ I+ Sbjct: 179 IALPSAMQSIFAGFRTATSGGLMVVLAAEMIGAKA------GLGFLITRGQDAFDVPLIM 232 Query: 243 YAMLTMLG---VIFLYDQLLFRPMIVWSNKFRLE 273 M+ + VI ++ LL R + WS + + Sbjct: 233 VGMIVIAIVGTVISIFTDLLERRICPWSENIKSD 266 >gi|269798745|ref|YP_003312645.1| binding-protein-dependent transporters inner membrane component [Veillonella parvula DSM 2008] gi|269095374|gb|ACZ25365.1| binding-protein-dependent transport systems inner membrane component [Veillonella parvula DSM 2008] Length = 250 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 10/231 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 V+ L + G + ++ + ++ R + II+ + Sbjct: 12 VAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISVV 71 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +G+ +G+ I + I P Q++ + P +V +++ Sbjct: 72 AGVFLGLILGWYKGIWNYINPVVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + +L + ++ + +VA +F I I+LP +FP +G A G AW Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + E+ TGLG I + +++ +L + L L+ Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 94/237 (39%), Gaps = 15/237 (6%) Query: 22 LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +A L+ ++ + P ++ + L + + + +R +IS+ Sbjct: 11 FVAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISV 70 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + + P++ +++ I + +L F V++F + AI Sbjct: 71 VAGVFLGLILGWYKGIWNYINPVVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + S ++ NI +V+R+F + + + + +P PG+ + +++ Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 W F+V EM+ G+G I ++ A+LT+ V L D Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233 >gi|238762666|ref|ZP_04623635.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia kristensenii ATCC 33638] gi|238698971|gb|EEP91719.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia kristensenii ATCC 33638] Length = 358 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ + +V I + A T +L+++ + Sbjct: 103 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTSLFFCI 162 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 163 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 219 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 220 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 274 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 275 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 325 Score = 90.4 bits (223), Expect = 8e-16, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + + P Sbjct: 65 PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 110 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + +T+ V+ + + Sbjct: 111 ---AILVFALIAWQFSTLGMGVATLVSLIAIGAIGAWSQAM----VTLALVLTSLFFCIL 163 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 164 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 219 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 220 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 279 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 280 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 325 >gi|28870234|ref|NP_792853.1| glycine betaine/L-proline ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213970351|ref|ZP_03398480.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381134|ref|ZP_07229552.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302058923|ref|ZP_07250464.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132547|ref|ZP_07258537.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853480|gb|AAO56548.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924822|gb|EEB58388.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331015472|gb|EGH95528.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 321 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 15/203 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L + + A T +L+++V ++ L A+S RL VL P LD MQ++P + Sbjct: 89 LGLIGVWADAMTTLSLVLTSLVFCVVIGVPLGVLCARSDRLERVLRPGLDAMQTLPAFVY 148 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L V+ F G V G + IF++ + + +P D E +R+F + Sbjct: 149 LVPVVMLFG---IGNVPGVLVTIIFSVA-----PLVRLTNLGIRQVPEDKVEAARAFGCT 200 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 Q + + +P + P ++ + ++ VV + MI VG G+G + I Sbjct: 201 RRQMLFKVQLPLAAPTIMAGLNQALMLSLSMVVIASMISVG-------GLGLMVLRGIGR 253 Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258 D+ + ++ + D+L Sbjct: 254 LDMGLATVGGVGLVLLAIFLDRL 276 Score = 84.2 bits (207), Expect = 6e-14, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 83/233 (35%), Gaps = 13/233 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 V + I + ++ G + ++ T ++ V T+ V+ ++ + Sbjct: 57 VPPTIFIIFATLLGWQVGGKKVGVMCFV--TLTLLGLIGVWADAMTTLSLVLTSLVFCVV 114 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+G+ + ++P + PA V+ VV N+ L+ I Sbjct: 115 IGVPLGVLCARSDRLERVLRPGLDAMQTLPAFVYLVPVVMLFGIG----NVPGVLVTIIF 170 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + ++ G P D E A +F T + + LP P + G A + + Sbjct: 171 SVAPLVRLTNLGIRQVPEDKVEAARAFGCTRRQMLFKVQLPLAAPTIMAGLNQALMLSLS 230 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + S G GLG + + +G + + + L+R Sbjct: 231 MVVIASMISVG-------GLGLMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 276 >gi|299822937|ref|ZP_07054823.1| glycine betaine/proline ABC superfamily ATP binding cassette transporter [Listeria grayi DSM 20601] gi|299816466|gb|EFI83704.1| glycine betaine/proline ABC superfamily ATP binding cassette transporter [Listeria grayi DSM 20601] Length = 287 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 102/236 (43%), Gaps = 17/236 (7%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L F+L++ ++ + G + I+ ++ I L T ++ + +++++ Sbjct: 55 LVFILILAVLAFFISGKKIGLTAFVIIGLLFIR--DQELWDALVNTITLVIVSSLVAIII 112 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 +KS+ ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 GVPVGVWMSKSKIAESIIKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFAL 169 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + +P +L E S S+ +GWQK + +P + ++ + ++ Sbjct: 170 PPTVRF-----TNLGIRQVPVELVEASDSYGTTGWQKLIKVELPIAKSTIMAGINQTVML 224 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + A ++++ + + D+ Sbjct: 225 ALSMVVIASMI-------GAPGLGRQVLQALQRAQVGNGFVAGVSLVILAIIMDRF 273 Score = 80.7 bits (198), Expect = 6e-13, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + ++ I V+ G +++ + + T+ V+V ++A I Sbjct: 52 IPPLVFILILAVLAFFISGKKIGLTAFVIIGLLFIRDQELWDALVNTITLVIVSSLVAII 111 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +PVG+W+ S I+P + P V+ V+ + + Sbjct: 112 IGVPVGVWMSKSKIAESIIKPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF---- 167 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + G P + E + S+ TGW+ + LP + G A + Sbjct: 168 ALPPTVRFTNLGIRQVPVELVEASDSYGTTGWQKLIKVELPIAKSTIMAGINQTVMLALS 227 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + ++ ++ + + + + ++RF Sbjct: 228 MVVIASMIG-------APGLGRQVLQALQRAQVGNGFVAGVSLVILAIIMDRF 273 >gi|212703296|ref|ZP_03311424.1| hypothetical protein DESPIG_01339 [Desulfovibrio piger ATCC 29098] gi|212673256|gb|EEB33739.1| hypothetical protein DESPIG_01339 [Desulfovibrio piger ATCC 29098] Length = 278 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 91/279 (32%), Gaps = 29/279 (10%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWL 382 P + + V + I W + V + + I + + + Sbjct: 2 PGRIIFWAAPLLVPVLFFIVWESMATLVGNSLILPPLEEIGTLLAHPLDNVIAMGTLAGN 61 Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 I++ RV+ A ++ +P+G+ +G+ + + F + P + PLV++ Sbjct: 62 IGISLVRVLCGYAAAVLLGVPLGVAMGYYAGLHRLLNLFLGMFRPIPPLAWVPLVLAWFG 121 Query: 443 YYHL----------------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 L N + + ++ G + IL + + G + A Sbjct: 122 VSSLATAMGLPRSEIYYYLNNLKISMLFIIFIGALFPILTSAVHGVQTVNRTLVDSARVL 181 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + + I+LP P V G G AW + +E+ +G+G I + Sbjct: 182 GASERDIFTKILLPAAAPSIVNGLRIGLGVAWMCLVSAEMLPG-----SLSGVGYLITHA 236 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGT 582 G V+ G++ + L+ Y + Sbjct: 237 YTVGRTDVVIAGMISISVVGALLDMAFQWIERRKYAWKQ 275 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 97/263 (36%), Gaps = 24/263 (9%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLSAMVI 78 + F +V + L+ +I ++ LD + +L + +R+L Sbjct: 16 VLFFIVWESMATLVGNSLILPPLEEIGTLLAHPLDNVIAMGTLAGNIGISLVRVLCGYAA 75 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA---- 134 ++L L +L L + + IP L ++ + +F +G Sbjct: 76 AVLLGVPLGVAMGYYAGLHRLLNLFLGMFRPIPPLAWVPLVLAWFGVSSLATAMGLPRSE 135 Query: 135 --------ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 +++ +F IF ++ + S + + R L + +R S F + +P Sbjct: 136 IYYYLNNLKISMLFIIFIGALFPILTSAVHGVQTVNRTLVDSARVLGASERDIFTKILLP 195 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 + P +V + + + W +V++EM+ L G+G I A ++ M+ Sbjct: 196 AAAPSIVNGLRIGLGVAWMCLVSAEMLPG-----SLSGVGYLITHAYTVGRTDVVIAGMI 250 Query: 247 TMLGVIFLYD---QLLFRPMIVW 266 ++ V L D Q + R W Sbjct: 251 SISVVGALLDMAFQWIERRKYAW 273 >gi|118588253|ref|ZP_01545662.1| probable amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118438959|gb|EAV45591.1| probable amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 294 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++ + + ++ + + + + V L + RT + +++++ Sbjct: 60 PIILAVFALAVYFLSRKISVTVGTVLALVFIGVFGLWEDTMRTVAMVTVCTLLAIVLGMP 119 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 + A+S R+ + PILD+MQ++P +L V+ F GKV G I+AI Sbjct: 120 IGIVMARSDRVQGFVNPILDLMQTMPSFVYLIPVVMIFG---IGKVPGLIAVVIYAIP-- 174 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + D+ E + +F S QK + +P ++P ++ + + Sbjct: 175 ---PMIRLTNLGIRLVDTDVLEAADAFGSSARQKLMNVQLPLALPTIMAGINQCIMMSLS 231 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + +AI Q L A + + L+++ + ++D+ Sbjct: 232 MVVVASMIGV-------RGLGQEVLVAINNQYLTAGMLSGLSIVAIAIIFDR 276 Score = 72.6 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 74/226 (32%), Gaps = 14/226 (6%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIIIASIIWIPVG 405 V +A+ + I V + V L T+ V V ++A ++ +P+G Sbjct: 62 ILAVFALAVYFLSRKISVTVGTVLALVFIGVFGLWEDTMRTVAMVTVCTLLAIVLGMPIG 121 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 I + + + P L+ P+ V+ VV + + ++ ++ Sbjct: 122 IVMARSDRVQGFVNPILDLMQTMPSFVYLIPVVMIFGIG----KVPGLIAVVIYAIPPMI 177 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 G D E A +F + + + LP P + G + + +V+ Sbjct: 178 RLTNLGIRLVDTDVLEAADAFGSSARQKLMNVQLPLALPTIMAGINQCIMMSLSMVVVAS 237 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + GLG + + +L L + + +R Sbjct: 238 MIG-------VRGLGQEVLVAINNQYLTAGMLSGLSIVAIAIIFDR 276 >gi|169338022|ref|ZP_02621223.2| glycine betaine transport system permease protein opuAB [Clostridium botulinum C str. Eklund] gi|169295381|gb|EDS77514.1| glycine betaine transport system permease protein opuAB [Clostridium botulinum C str. Eklund] Length = 277 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 17/237 (7%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84 +IG+ I L + + T I+ ++ I +L Q T + ++ + VISLL Sbjct: 48 LFFIIGLSVIALILVNKKTALFTILGLLLIF--QMNLWQMFIETFVLVIISTVISLLIGI 105 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 L K R L ++ P+LD MQ++P +L V++F G V G IF++ Sbjct: 106 PIGILMNKKRILDKIITPVLDFMQTMPSFVYLIPAVMFFG---IGNVPGIISTVIFSMPP 162 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + L +P++LEEV +SF + + + + +P ++P ++ + S+ Sbjct: 163 A-----VRLTKLGLEQVPKELEEVGKSFGFNSIEMLYKIRIPLALPSIMAGINQSIMMAL 217 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 VV + MI G+GS + I+ D+ A L ++ + + D++ R Sbjct: 218 SMVVVASMI-------GTRGLGSQVLSGIQRNDIGVGFEAGLAVVILAIILDRITRR 267 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 78/231 (33%), Gaps = 12/231 (5%) Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPV 404 +F+ + +A+ + + +W I T V++ +I+ +I IP+ Sbjct: 48 LFFIIGLSVIALILVNKKTALFTILGLLLIFQMNLWQMFIETFVLVIISTVISLLIGIPI 107 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GI + + + I P + P+ V+ V ++ + + + Sbjct: 108 GILMNKKRILDKIITPVLDFMQTMPSFVYLIPAVMFFGIGNVPGIISTVIF----SMPPA 163 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G P + +EV SF I +P P + G + A + +V+ Sbjct: 164 VRLTKLGLEQVPKELEEVGKSFGFNSIEMLYKIRIPLALPSIMAGINQSIMMALSMVVVA 223 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + T GLG+ + ++ L + + L+R Sbjct: 224 SMIG-------TRGLGSQVLSGIQRNDIGVGFEAGLAVVILAIILDRITRR 267 >gi|259907586|ref|YP_002647942.1| glycine betaine transporter membrane protein [Erwinia pyrifoliae Ep1/96] gi|224963208|emb|CAX54692.1| Glycine betaine/L-proline transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283477428|emb|CAY73344.1| Glycine betaine/L-proline ABC transport system,inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 387 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q +++ + +V + + A T +L+A++ + Sbjct: 134 LLGMPAPVAIIVFALIAWQLSSLSMGVATLVSLVAIGAIGAWSQAMVTLALVLTALLFCI 193 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S+R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 194 VIGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 250 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 251 A-----LPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 305 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 306 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356 Score = 90.4 bits (223), Expect = 8e-16, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 95/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + + + + P Sbjct: 96 PLDSWV------TTAIDWVVTHFRPLFQGIRLPIDYILSAFQQLLLGMPAPV-------- 141 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F ++ + ++ +V + + V+ ++ + Sbjct: 142 ---AIIVFALIAWQLSSLSMGVATLVSLVAIGAIGAWSQAMVTLAL----VLTALLFCIV 194 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 195 IGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 250 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + + LP P + G A + Sbjct: 251 ALPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 310 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356 >gi|159186005|ref|NP_356598.2| ABC transporter, membrane spanning protein (glycine betaine) [Agrobacterium tumefaciens str. C58] gi|159141139|gb|AAK89383.2| ABC transporter, membrane spanning protein (glycine betaine) [Agrobacterium tumefaciens str. C58] Length = 295 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 98/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +VI I+ L + + + + + + +T + V+S++ Sbjct: 61 PVVILIVGALAWFASRSATIVSLCCGILFAIGWFGMWEDTMKTVSMIFVCAVMSIVIGLP 120 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S RL V+ P+LD+MQ++P +L V+ G+V G + A+ Sbjct: 121 IGIAMARSNRLQNVVNPVLDVMQTMPSFVYLIPVVMLLG---IGRVPG-----VIAVIIY 172 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + M + + D+ E + +F S QK + + +P ++P ++ + ++ Sbjct: 173 AIPPMIRLTNLGIRMVDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAGINQTIMMALA 232 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q ++ L ++G+ ++D++ Sbjct: 233 MVVIASMIGV-------QGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278 Score = 75.3 bits (184), Expect = 3e-11, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 92/281 (32%), Gaps = 29/281 (10%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 F R G + F+PL + + R L + + + + WF Sbjct: 27 RGFTRTYGGAIEGLFTPLQSFLIWAERLLIGAPWPVV-----------ILIVGALAWFAS 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + + + I ++D T+ + V +++ +I +P+GI + Sbjct: 76 RSATIVSLCCGILFAIGWFGMWED-------TMKTVSMIFVCAVMSIVIGLPIGIAMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + + + P ++ P+ V+ VV + + + +I ++ G Sbjct: 129 NRLQNVVNPVLDVMQTMPSFVYLIPVVMLLGIGR----VPGVIAVIIYAIPPMIRLTNLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 +D E A +F + + + LP P + G A +++ + Sbjct: 185 IRMVDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + ++ F V L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278 >gi|121610569|ref|YP_998376.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121555209|gb|ABM59358.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 275 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 101/281 (35%), Gaps = 23/281 (8%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + + R L + R ++L + +F + + + Sbjct: 2 RPVPRHLSAAAPLRRALTPLAPVSARSRWLLGLAFFVIFVALWTWFTLGGWVSPTFLASP 61 Query: 374 QDVLYVIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 +L WL +T++RV+ ++A+ + +P+GI +G I + +PF Sbjct: 62 PTMLRQAWLLLTEYGFVKDIGMTVWRVLAGFVLAAAVALPLGIAMGAYKGIEAFFEPFVS 121 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 PA+ F PL++ L++ G+ + I V + D E A Sbjct: 122 FCRYLPASAFIPLLILWAGIGEAQK----ILVIFIGSVFQITLMVAVTVGSARRDLVEAA 177 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 + +++PG P G AW IV+E+ ++G+G I Sbjct: 178 YTLGAGHRGIVTRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMI 231 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581 +S + +++ G++ + L + + L L+ + Sbjct: 232 TDSQALLNTGQIIFGIITIGLIGLLSDLAFKALNQRLFAWS 272 Score = 95.0 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 93/256 (36%), Gaps = 21/256 (8%) Query: 19 IFDLLAFVLVIGIINILLHGIQ----ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + L FV+ + + G P ++ + L + + T R+L+ Sbjct: 31 LLGLAFFVIFVALWTWFTLGGWVSPTFLASPPTMLRQAWLLLTEYGFVKDIGMTVWRVLA 90 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 V++ + + P + + +P F+ +++ Sbjct: 91 GFVLAAAVALPLGIAMGAYKGIEAFFEPFVSFCRYLPASAFIPLLILWAGIG-------- 142 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E I IF V+ +T + ++ + RDL E + + + +P + PG+ Sbjct: 143 EAQKILVIFIGSVFQITLMVAVTVGSARRDLVEAAYTLGAGHRGIVTRVLIPGAAPGIAE 202 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + + + W +V+ +E+I GIG I + + I++ ++T+ + L Sbjct: 203 TLRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIITIGLIGLL 256 Query: 255 YD---QLLFRPMIVWS 267 D + L + + WS Sbjct: 257 SDLAFKALNQRLFAWS 272 >gi|328468887|gb|EGF39847.1| glycine betaine/L-proline transport system permease [Vibrio parahaemolyticus 10329] Length = 361 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T +L+++ LL A+S+ + PILD MQ+ P +L V+ F Sbjct: 139 AMTTLALVLTSVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 198 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA + + + +P +L E SF + Q + + Sbjct: 199 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 250 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ VV + MI VG G+G + I D+ Sbjct: 251 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 303 Query: 245 MLTMLGVIFLYDQL 258 L ++ + L D++ Sbjct: 304 GLGIVILAILLDRI 317 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 ++ + +AWQ + + T ++++ +G T+ V+ + +I +P+G Sbjct: 102 IMVLILFLLAWQFSNFKLGLSTLVSLVFIGLIGAWSQAMTTLALVLTSVFFCLLIGLPMG 161 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+ + ++P + PA V+ +V N+ ++ I ++ Sbjct: 162 IWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVV 217 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 I G P + E SF + I LP P + G + + +++ Sbjct: 218 RLTILGIQQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIAS 277 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G L + + L+R Sbjct: 278 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317 >gi|328543758|ref|YP_004303867.1| ATP-binding cassette (ABC) superfamily transporter permease [polymorphum gilvum SL003B-26A1] gi|326413502|gb|ADZ70565.1| ATP-binding cassette (ABC) superfamily transporter, permease component [Polymorphum gilvum SL003B-26A1] Length = 276 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 89/280 (31%), Gaps = 16/280 (5%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV------AIGIAW 361 L + G R + L +L + W+ V + Sbjct: 2 SLEGAAGDIPALAGPARASQGKTLRSLGFAGLGMVLLMVLWWVGGVLVERNPNTVAFAGF 61 Query: 362 QSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 + + + ++ RV+ + +A I +P+GI +G P + Sbjct: 62 APVPALSRLADMVASGEAWAMIVPSLERVLGGLAVAIAIGVPLGILVGRVPMLREITNIP 121 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 Q L + P+ V + + L+ W +LF AG + + Sbjct: 122 FQFLRMISPLSWMPIAVMAFPTWDG----AIVFLIAIAALWPVLFATAAGLKRVDPAWFK 177 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 VA + W IILP I +TG A G AW + +E T+GLG Sbjct: 178 VARNLGARPWHMLFLIILPAISQDILTGIRLALGVAWIVLVPAEYLG------VTSGLGY 231 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYG 581 I ++ + + + V+I+ L+ + Sbjct: 232 AINDARDTLEYDRLAATVVIIGAIGFGLDFLCQQAIARLS 271 Score = 99.2 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 75/215 (34%), Gaps = 14/215 (6%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P + + + + R+L + +++ L + L + Sbjct: 62 APVPALSRLADMVASGEAWAMIVPSLERVLGGLAVAIAIGVPLGILVGRVPMLREITNIP 121 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 ++ I L ++ V+ F + A +F I + +W + F+ L + Sbjct: 122 FQFLRMISPLSWMPIAVMAF--------PTWDGAIVFLIAIAALWPVLFATAAGLKRVDP 173 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 +V+R+ W + + +P ++ + +++ W +V +E + V Sbjct: 174 AWFKVARNLGARPWHMLFLIILPAISQDILTGIRLALGVAWIVLVPAEYLGV------TS 227 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G I A + + ++ + + F D L Sbjct: 228 GLGYAINDARDTLEYDRLAATVVIIGAIGFGLDFL 262 >gi|227509979|ref|ZP_03940028.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane-spanning subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190585|gb|EEI70652.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane-spanning subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 283 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 18/243 (7%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSA 75 IFDL+ L I ++ + + T ++ I L + ++T +L++ Sbjct: 44 IFDLIPIWLFIVLVVGGTYWLNRKTKHWTLIGFEVIGLLYVWNQGYWRDMTQTLTLVLTS 103 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 +I+L+ AKS+ + +++ PILD MQ++P +L V +F G V G Sbjct: 104 SLIALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVI 160 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + IFA+ + +P DL E + S+ + WQK + +P + L+ Sbjct: 161 ASVIFAMP-----PTIRMTNLGIRQVPEDLIEAADSYGSTSWQKLIKVQLPLAKSTLMAG 215 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + SM VV + MI G+G+ + A+ D + A L ++ + + Sbjct: 216 VNQSMMLSLSMVVIASMI-------GAMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIIL 268 Query: 256 DQL 258 D++ Sbjct: 269 DRI 271 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 17/236 (7%) Query: 343 MLDIFWFCVVCGVAIGIA------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396 ++ I+ F V+ W IG+ V Y T+ V+ +I Sbjct: 47 LIPIWLFIVLVVGGTYWLNRKTKHWTLIGFEVIGLLYVWNQGYWRDMTQTLTLVLTSSLI 106 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +I +P+GIW+ + ++P + PA V+ V+ + + + Sbjct: 107 ALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFGIGMVPGVIASVIF- 165 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G P D E A S+ T W+ + LP + G + Sbjct: 166 ---AMPPTIRMTNLGIRQVPEDLIEAADSYGSTSWQKLIKVQLPLAKSTLMAGVNQSMML 222 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + GLG + + + L + + L+R Sbjct: 223 SLSMVVIASMIG-------AMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIILDRI 271 >gi|218549967|ref|YP_002383758.1| taurine transporter subunit [Escherichia fergusonii ATCC 35469] gi|218357508|emb|CAQ90147.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|325498342|gb|EGC96201.1| taurine transporter subunit [Escherichia fergusonii ECD227] Length = 275 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 R +P + S ++ ++ I+W C + + Q + +V Q + Sbjct: 13 RWRLRWPLSRQLTLSFSVLAVLVTIWWAVTACQLISPLFLPPPQQVLAKLVTIAGAQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 +M R+++ +I A +I IP G+ +G P I + P +L P + P Sbjct: 73 DATLWQHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V P + L L IF + + +AG + A S + Sbjct: 133 LMVIWFGIGE-TPKVLLIWLAIFA---PLTMSALAGVQSVQQVRIRAAQSLGANRVQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 Y+ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 YVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAVIAFLLELSLRALQRRLTPW 270 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 94/216 (43%), Gaps = 17/216 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+L A++ +++ S + +L PI+++ + +P L +L Sbjct: 74 ATLWQHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPL 133 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F KV+ LA +T S + ++ + ++S + Q Sbjct: 134 MVIWFGIGETPKVLLIWLAIFA--------PLTMSALAGVQSVQQVRIRAAQSLGANRVQ 185 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 WY+ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 186 VLWYVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 239 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 +L + + + FL + + L R + W + + Sbjct: 240 DVVLAGIAVIAVIAFLLELSLRALQRRLTPWHGEVK 275 >gi|238018381|ref|ZP_04598807.1| hypothetical protein VEIDISOL_00206 [Veillonella dispar ATCC 17748] gi|237864852|gb|EEP66142.1| hypothetical protein VEIDISOL_00206 [Veillonella dispar ATCC 17748] Length = 250 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 81/231 (35%), Gaps = 10/231 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ L + G + ++ + ++ R + +I+ + Sbjct: 12 IAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFMGYLISVV 71 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + G+ +G+ I + I P Q++ + P +V +++ Sbjct: 72 AGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + +L + ++ + +VA +F I I+LP +FP +G A G AW Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + E+ TGLG I + +++ +L + L L+ Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 15/237 (6%) Query: 22 LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +A L+ +I L P ++ + L + + + +R +IS+ Sbjct: 11 FIAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFMGYLISV 70 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + + + PI+ +++ I + +L F V++F + AI Sbjct: 71 VAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + S ++ NI +V+R+F + + + + +P PG+ + +++ Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 W F+V EM+ G+G I ++ A+LT+ V L D Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233 >gi|312958359|ref|ZP_07772880.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas fluorescens WH6] gi|311287423|gb|EFQ65983.1| sulfonate/nitrate/taurine transport system permease [Pseudomonas fluorescens WH6] Length = 278 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 90/278 (32%), Gaps = 27/278 (9%) Query: 320 LGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 L + + + + V+ + + + + VL Sbjct: 6 LPATAVKPAARTVIPVRRSLSTRWISVLTLVVLLAIWWAVTATGLIEPLFLPPPSAVLQK 65 Query: 380 IWLGCIT--------------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 WL T + R+ + + A + +PVGI IG + P + Sbjct: 66 GWLLATTGYMDSTLWQHLGASLSRIGLGLGFAVLTAVPVGIAIGSNRIARGILDPLIEFY 125 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL+V L+ LL+ I G A S Sbjct: 126 RPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQS 181 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + + R++ILP P +TG G W+ + +E+ + T+GLG + Sbjct: 182 LGASRAQLIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQS 235 Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + + VVLG+L++ A+ R L L + Sbjct: 236 AAQFLVTDVVVLGILVIALIAFAMEMGLRALQRKLVPW 273 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 98/267 (36%), Gaps = 26/267 (9%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDI----VPITLDVHSLPQ 63 RR + + ++V+ I + P ++ +L Q Sbjct: 22 RRSLSTRWISVLTLVVLLAIWWAVTATGLIEPLFLPPPSAVLQKGWLLATTGYMDSTLWQ 81 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + R+ + ++L +R +L P+++ + IP L +L V++ Sbjct: 82 HLGASLSRIGLGLGFAVLTAVPVGIAIGSNRIARGILDPLIEFYRPIPPLAYLPLIVIWC 141 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 EL+ + I+ + + + + + ++S S Q ++ Sbjct: 142 GIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGASRAQLIRHV 193 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P ++ + + + GW +VA+E+I G+G + A + ++ Sbjct: 194 ILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVL 247 Query: 244 AMLTMLGVIFLYD---QLLFRPMIVWS 267 +L + + F + + L R ++ W Sbjct: 248 GILVIALIAFAMEMGLRALQRKLVPWH 274 >gi|82778052|ref|YP_404401.1| glycine betaine transporter membrane protein [Shigella dysenteriae Sd197] gi|309786249|ref|ZP_07680877.1| glycine betaine/L-proline transport system permease protein proW [Shigella dysenteriae 1617] gi|81242200|gb|ABB62910.1| high-affinity transport system for glycine betaine and proline [Shigella dysenteriae Sd197] gi|308925994|gb|EFP71473.1| glycine betaine/L-proline transport system permease protein proW [Shigella dysenteriae 1617] Length = 354 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL+ + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLSMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLPLVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F + + Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGN--------VPGVV 212 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 T + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 213 VTITFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 90.8 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 88/242 (36%), Gaps = 15/242 (6%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 F QL + + +F +G+ ++ ++ + +T+ V Sbjct: 97 FQQLLLSMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAM----VTLPLV 152 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + ++ +I +P+GIW+ P + I+P + PA V+ +V N+ Sbjct: 153 LTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NV 208 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 ++ I I+ I G + P D E + SF + + + LP P + G Sbjct: 209 PGVVVTITFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGV 268 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A + +++ + + G GLG + + +G + + + L+ Sbjct: 269 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILD 321 Query: 571 RF 572 R Sbjct: 322 RL 323 >gi|310764905|gb|ADP09855.1| glycine betaine transporter membrane protein [Erwinia sp. Ejp617] Length = 387 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q ++ + +V + + A T +L+A++ + Sbjct: 134 LLGMPAPVAIIVFALIAWQLSSFSMGVATLVSLVAIGAIGAWSQAMVTLALVLTALLFCI 193 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S+R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 194 VIGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 250 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 251 A-----LPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 305 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 306 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 94/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + +I F + V + + P Sbjct: 96 PLDSWV------TTAIDWIVSHFRPLFQGIRLPVDYILNAFQQLLLGMPAPV-------- 141 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F + + ++ +V + + V+ ++ + Sbjct: 142 ---AIIVFALIAWQLSSFSMGVATLVSLVAIGAIGAWSQAMVTLAL----VLTALLFCIV 194 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 195 IGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 250 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + + LP P + G A + Sbjct: 251 ALPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 310 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356 >gi|78484380|ref|YP_390305.1| binding-protein dependent transport system inner membrane protein [Thiomicrospira crunogena XCL-2] gi|78362666|gb|ABB40631.1| ATP-binding cassette (ABC) superfamily transporter, permease component [Thiomicrospira crunogena XCL-2] Length = 276 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 93/251 (37%), Gaps = 16/251 (6%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385 + P + + +L + W+ +A ++ T+ + Y+I G I Sbjct: 21 NLPGWLQSVINATSGMGILLLVWWIGGILIASNPDTEAFAAFAPGPTFSALWYLIETGSI 80 Query: 386 ------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 +++R++ + +I +P G+ +G+ Q L + P+ V Sbjct: 81 WETIYSSLYRIITGLFWGVVIGVPTGVLVGYFLMFRQVANMPFQFLRMISPLAWMPIAVL 140 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + L+ T W I+F G ++ +VA + G++ R +I+ Sbjct: 141 AFETWDA----AIIFLLSMATIWPIVFGTAHGVQRIDPNWFQVARNLGADGYQMLRRVIM 196 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P I G A G AW + +E T+GLG I ++ + + + V Sbjct: 197 PAIAQDVFAGIRLAIGVAWVVLVPAEYLG------VTSGLGYAINDARDTLDYDTLAAIV 250 Query: 560 LIMCCFVLALN 570 +++ L+ Sbjct: 251 VVIGIIGYLLD 261 Score = 99.2 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 77/215 (35%), Gaps = 14/215 (6%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P + ++ S+ + + R+++ + ++ L V Sbjct: 63 APGPTFSALWYLIETGSIWETIYSSLYRIITGLFWGVVIGVPTGVLVGYFLMFRQVANMP 122 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 ++ I L ++ V+ F + A IF + + +W + F + I Sbjct: 123 FQFLRMISPLAWMPIAVLAFETW--------DAAIIFLLSMATIWPIVFGTAHGVQRIDP 174 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 + +V+R+ G+Q + +P + + +++ W +V +E + V Sbjct: 175 NWFQVARNLGADGYQMLRRVIMPAIAQDVFAGIRLAIGVAWVVLVPAEYLGV------TS 228 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G I A D + ++ + + +L D + Sbjct: 229 GLGYAINDARDTLDYDTLAAIVVVIGIIGYLLDFI 263 >gi|71083984|ref|YP_266704.1| glycine betaine/L-proline transport system permease [Candidatus Pelagibacter ubique HTCC1062] gi|71063097|gb|AAZ22100.1| glycine betaine/L-proline transport system permease [Candidatus Pelagibacter ubique HTCC1062] Length = 717 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 95/545 (17%), Positives = 180/545 (33%), Gaps = 55/545 (10%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 I + V + + +T +L A +S LF + +A KS+R+ L PIL +MQ++P Sbjct: 189 IYISVFGQWKPSMQTLSFILVAAPLSFLFGLTFGVMAFKSKRVEKFLYPILLVMQTMPQY 248 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 L +V F + AA+ V M L IP ++ E R Sbjct: 249 AVLVPAIVLFGIG--------DHAAVIITMVVAVPPMILLTLLGLRGIPSEVIEAGRMSG 300 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 + WQ + +P + ++ + ++ + V I G+G + LA+ Sbjct: 301 CNNWQLMTKVLIPTARRDILIGVNQ-------VIMVCFSMAVISAFIGAKGLGFNLLLAL 353 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTN 293 + ++ L A L + + L D++ + W+NK Y + + F Sbjct: 354 NQLNIGLALEAGLCISLIAILLDKMS----LAWANKQIDYFGNLTYFQRNKNILFFAAAV 409 Query: 294 FLRFI-----------------------GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 L I G S+ +F++ + + I + Sbjct: 410 ILGIIFSYLGSFYFKDGSNYLFEVPHNKGISTADFWNKGVDWIWDTFFHTLKIFNTWLIV 469 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGCITMFR 389 + M + +V G I +V T L W +T++ Sbjct: 470 DVLQPMRALYLRMPAVATLVLVIGAGYIIGGIRSALVVGGLTLFIALSPWWDRALVTLYM 529 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 + I++II VGI H ++ + + FP+ V+ V+ + Sbjct: 530 ATFGVFISTIIGFTVGIISFQNKHTANFMLGVCDIFQTFPSFVYLIPVMMLFGVTDTSVL 589 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + + + Y I G + P + A+ + + I P FP+ + G Sbjct: 590 IAVIVYATIPATRY----TIEGLRSVPEALHDAATMSGVNKVQRLLKIEFPLAFPHMMLG 645 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV-LIMCCFVLA 568 A I+ LG YI ++ + L + L + L Sbjct: 646 LNQTIVFALFMVIIGAFIGTED-------LGQYILKALSDKKGAGIGLTLGLCVAFIGLI 698 Query: 569 LNRFL 573 + + Sbjct: 699 FDHLI 703 >gi|303231730|ref|ZP_07318453.1| ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] gi|302513679|gb|EFL55698.1| ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] Length = 250 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 73/194 (37%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + ++ R + II+ + + G+ +G+ I + I P Q++ + P Sbjct: 49 GVLFKDIADSLVRFFIGYIISVVAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPF 108 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V +++ + +L + ++ + +VA +F I Sbjct: 109 IVLFFGIGQA----PAIVIIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFK 164 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP +FP +G A G AW + E+ TGLG I + ++ Sbjct: 165 IVLPAVFPGIASGLHIALGTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLM 218 Query: 557 LGVLIMCCFVLALN 570 + +L + L L+ Sbjct: 219 VAILTIGFVGLLLD 232 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 15/237 (6%) Query: 22 LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +A L+ +I L P ++ + L + + + +R +IS+ Sbjct: 11 FIAAWLIWELIVRLGGFNEALLPTPHKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISV 70 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + + + PI+ +++ I + +L F V++F + AI Sbjct: 71 VAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + S ++ NI +V+R+F + + + + +P PG+ + +++ Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 W F+V EM+ G+G I ++ A+LT+ V L D Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233 >gi|296101489|ref|YP_003611635.1| sulfonate/nitrate/taurine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055948|gb|ADF60686.1| sulfonate/nitrate/taurine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 275 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 90/237 (37%), Gaps = 14/237 (5%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 W + G + I + D LG ++ R++V ++ A II IPVGI Sbjct: 45 AWISPLFLPPPGQVLAKLITIAGPQGFMDATLWQHLGA-SLARILVALLAAVIIGIPVGI 103 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 +G P + + P +L P + PL+V + LL+ + Sbjct: 104 AMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAM 159 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 + +AG + A S + + ++ILPG P +TG G W+ + +E+ Sbjct: 160 SALAGVKSAQQVRIRAAQSLGASRTQVLLFVILPGALPEILTGLRIGLGVGWSTLVAAEL 219 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + T GLG + + E + V+ G+ ++ L R L L + Sbjct: 220 IA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFGLELGLRALQRRLTPW 270 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 89/218 (40%), Gaps = 17/218 (7%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 P +L Q+ + R+L A++ +++ S + +L P++++ + +P Sbjct: 68 PQGFMDATLWQHLGASLARILVALLAAVIIGIPVGIAMGLSPTVRGILDPLIELYRPVPP 127 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 L +L V++F E + I I+ + + S + + + ++S Sbjct: 128 LAYLPLMVIWFGIG--------ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSL 179 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 S Q ++ +P ++P ++ + + + GW +VA+E+I G+G + A Sbjct: 180 GASRTQVLLFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 233 Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 + +L + + + F + + L R + W Sbjct: 234 GEFLATDVVLAGIAVIAVIAFGLELGLRALQRRLTPWH 271 >gi|156935089|ref|YP_001439005.1| taurine transporter subunit [Cronobacter sakazakii ATCC BAA-894] gi|156533343|gb|ABU78169.1| hypothetical protein ESA_02940 [Cronobacter sakazakii ATCC BAA-894] Length = 275 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R++ ++ A++I IPVGI +G P + + + P +L P + PL+V Sbjct: 81 GASLGRMLTALLAAALIGIPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + + +AG + A S + W+ ++ILPG Sbjct: 141 GETSK----VLLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRWQLLWHVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 250 Query: 564 CFVLALN---RFLWHPLYLY 580 L R L L + Sbjct: 251 LVAFILELGLRALTRRLTPW 270 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 98/247 (39%), Gaps = 22/247 (8%) Query: 29 IGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 + L P+ ++ + P +L + + RML+A++ + L Sbjct: 39 WAATALQLVSPLFLPAPQQVLRQLITIAGPQGFMDATLWAHLGASLGRMLTALLAAALIG 98 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 + L +L P++++ + IP L +L V++F KV+ LA + Sbjct: 99 IPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGIGETSKVLLIYLAIFAPVA 158 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 S + + + + ++S S WQ W++ +P ++P ++ + + + G Sbjct: 159 MSAL--------AGVKSAQQVRIRAAQSLGASRWQLLWHVILPGALPEILTGLRIGLGVG 210 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLF 260 W +VA+E+I G+G + A + +L + + V F+ + + L Sbjct: 211 WSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIALVAFILELGLRALT 264 Query: 261 RPMIVWS 267 R + W Sbjct: 265 RRLTPWH 271 >gi|319782578|ref|YP_004142054.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168466|gb|ADV12004.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 267 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 89/254 (35%), Gaps = 22/254 (8%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---------ITMFRVVV 392 L + +V G+AIG + G + Q I L ++ RV+ Sbjct: 23 RGLALNLCGLVAGIAIGWVLTAGGAVGLPPPPQVASRFIDLIANGQLATDIMSSLARVMT 82 Query: 393 LIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWL 452 ++ I+ IPVG +G+ S I+P+ Q P PL + + Sbjct: 83 GFLLGVILAIPVGFVMGWYKVARSLIEPYLQFFRMIPPLAIIPLAIVTMGI----DETPK 138 Query: 453 SLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAIT 512 ++ + + G + A + +I+P P+ + G Sbjct: 139 VFVIFLASFLASVVATYQGVISVDKTMINAARVLGAKDMTIFLRVIIPASTPFILVGVRI 198 Query: 513 ACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 G AW + +E+ + TGLG + ++ P + + ++ + LA++R Sbjct: 199 GLGSAWATLVAAELIA------AQTGLGFRMQQAQLYYDLPTIFVSLITIGLLGLAMDRI 252 Query: 573 LW---HPLYLYGTR 583 L L ++ R Sbjct: 253 LLVIERRLTVWQER 266 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 86/240 (35%), Gaps = 17/240 (7%) Query: 33 NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92 + G P + + L + R+++ ++ ++ + Sbjct: 41 VLTAGGAVGLPPPPQVASRFIDLIANGQLATDIMSSLARVMTGFLLGVILAIPVGFVMGW 100 Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 + ++ P L + IP L + +V K +F IF + Sbjct: 101 YKVARSLIEPYLQFFRMIPPLAIIPLAIVTMGIDETPK--------VFVIFLASFLASVV 152 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + YQ + ++ + + +R F + +P S P ++ + + + W +VA+E+ Sbjct: 153 ATYQGVISVDKTMINAARVLGAKDMTIFLRVIIPASTPFILVGVRIGLGSAWATLVAAEL 212 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269 I G+G + A DL I +++T+ + D++L R + VW + Sbjct: 213 IAAQT------GLGFRMQQAQLYYDLPTIFVSLITIGLLGLAMDRILLVIERRLTVWQER 266 >gi|227512913|ref|ZP_03942962.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227523041|ref|ZP_03953090.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227083913|gb|EEI19225.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227089859|gb|EEI25171.1| glycine/betaine/carnitine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 283 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 18/243 (7%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD---VHSLPQYASRTTLRMLSA 75 IFDL+ L I ++ + + T ++ I L + ++T +L++ Sbjct: 44 IFDLIPIWLFIVLVVGGTYWLNRKTKHWTLIGFEVIGLLYVWNQGYWRDMTQTLTLVLTS 103 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 +I+L+ AKS+ + +++ PILD MQ++P +L V +F G V G Sbjct: 104 SLIALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVI 160 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 + IFA+ + +P DL E + S+ + WQK + +P + L+ Sbjct: 161 ASVIFAMP-----PTIRMTNLGIRQVPEDLIEAADSYGSTSWQKLVKVQLPLAKSTLMAG 215 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + SM VV + MI G+G+ + A+ D + A L ++ + + Sbjct: 216 VNQSMMLSLSMVVIASMI-------GAMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIIL 268 Query: 256 DQL 258 D++ Sbjct: 269 DRI 271 Score = 86.1 bits (212), Expect = 2e-14, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 17/236 (7%) Query: 343 MLDIFWFCVVCGVAIGIA------WQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIII 396 ++ I+ F V+ W IG+ V Y T+ V+ +I Sbjct: 47 LIPIWLFIVLVVGGTYWLNRKTKHWTLIGFEVIGLLYVWNQGYWRDMTQTLTLVLTSSLI 106 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A +I +P+GIW+ + ++P + PA V+ V+ + + + Sbjct: 107 ALVIGVPIGIWMAKSKVVEIIVKPILDFMQTMPAFVYLIPAVAFFGIGMVPGVIASVIF- 165 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + G P D E A S+ T W+ + LP + G + Sbjct: 166 ---AMPPTIRMTNLGIRQVPEDLIEAADSYGSTSWQKLVKVQLPLAKSTLMAGVNQSMML 222 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + GLG + + + L + + L+R Sbjct: 223 SLSMVVIASMIG-------AMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIILDRI 271 >gi|71737350|ref|YP_277000.1| taurine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557903|gb|AAZ37114.1| taurine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 291 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 103/313 (32%), Gaps = 32/313 (10%) Query: 271 RLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPEN 330 RLE DS L K + + + S + ++ L L + Sbjct: 3 RLEPVGSHELIDSRELTGISKPFAKQPAAPTPKVYLSTRAISILTLVALLTLWWAVTAGG 62 Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 +++ + +L W G WQ +G ++ R+ Sbjct: 63 WIEPLFLPPPADVLSKGWLLATKGYMDATLWQHLG-------------------ASLQRI 103 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + + A + IP+GI IG P + P + PL+V + Sbjct: 104 GLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPLIVIWFGIGEFSK-- 161 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 LL+ I G A S T W+ R+++LP P +TG Sbjct: 162 --VLLIYLAIFAPIAIATATGVRTVDPIKVRAAQSLGATLWQLIRHVVLPSALPDILTGI 219 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G W+ + +E+ + T+GLG + + + VVLG+L++ A+ Sbjct: 220 RIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILVIAVIAFAME 273 Query: 571 ---RFLWHPLYLY 580 R L L + Sbjct: 274 LGLRALQRRLVPW 286 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ A+ ++L +R + P+++ + IP L +L Sbjct: 90 ATLWQHLGASLQRIGLALAAAILTAIPIGIAIGHNRIAQGIFDPLIEFYRPIPPLAYLPL 149 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + + I+ + + + + + ++S + WQ Sbjct: 150 IVIWFGIG--------EFSKVLLIYLAIFAPIAIATATGVRTVDPIKVRAAQSLGATLWQ 201 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 202 LIRHVVLPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 255 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 256 DVVVLGILVIAVIAFAMELGLRALQRRLVPWH 287 >gi|37525249|ref|NP_928593.1| glycine betaine transporter membrane protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784676|emb|CAE13576.1| Glycine betaine/L-proline transport system permease protein proW [Photorhabdus luminescens subsp. laumondii TTO1] Length = 361 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 15/181 (8%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++ A S+R ++ P+LD MQ+ P +L V+ F G V G + Sbjct: 163 FCIIVGLPLGIWLAHSKRAAKIIQPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVIVT 219 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 IFA + + + +P DL E + SF S Q + + +P +MP ++ + Sbjct: 220 IIFA-----LPPIVRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVN 274 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++ VV + MI VG G+G + I D+ + ++ + L D+ Sbjct: 275 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAILLDR 327 Query: 258 L 258 L Sbjct: 328 L 328 Score = 90.8 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 85/280 (30%), Gaps = 12/280 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + + V IR F + Sbjct: 61 PFQHPLIPLDSWVTQAIDWIVLNFRPAFQGIRVPIDFVLSGFEQCLTSIPAPIAILFFAL 120 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 + I +++ ++ +T+ + ++ I+ +P+GIW+ Sbjct: 121 IAWQLSGIGMGITALISLVIIGEIG-AWHESMVTLSLALTSLLFCIIVGLPLGIWLAHSK 179 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + IQP + PA V+ +V N+ ++ I I+ I G Sbjct: 180 RAAKIIQPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVIVTIIFALPPIVRLTILGI 235 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P D E A SF + + + LP P + G A + +++ + + G Sbjct: 236 KQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG-- 293 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G + + + L+R Sbjct: 294 -----GLGQMVLRGIGRLDMGLATVGGVGIVILAILLDRL 328 >gi|147676909|ref|YP_001211124.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Pelotomaculum thermopropionicum SI] gi|146273006|dbj|BAF58755.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Pelotomaculum thermopropionicum SI] Length = 217 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 7/208 (3%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI---GIAWQSIGYIVNHFTYQ 374 R + V+R F + + R+ + IF + + +V + Sbjct: 14 RNVRVMRERIIGAFGRKQALYRMISVAAIFGAWQLAANHYHSNFLMPSPWKTMVTFISVV 73 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 V+ IT+ RV+ + A +I +P+G +G+ + + + P + P + Sbjct: 74 HDPEVVKNLLITLKRVLTGFLYALMIGVPLGFLMGYSKAVMNILDPLIDSVRQVPIMAWV 133 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + L+ F + ++ N IAG P D+ A S W + Sbjct: 134 PLTIVWFGLGDG----PTVFLIAFAGVFPVILNTIAGVQNIPKDYYNAARSMGAGPWSIF 189 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASI 522 +I+PG P +TG A G W + I Sbjct: 190 VNVIVPGSLPDILTGGRIAVGLGWMSVI 217 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 8/200 (4%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 F ++ + + A + H P + + + + T Sbjct: 26 AFGRKQALYRMISVAAIFGAWQLAANHYHSNFLMPSPWKTMVTFISVVHDPEVVKNLLIT 85 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L+ + +L+ L S+ + +L P++D ++ +PI+ ++ T+V+F Sbjct: 86 LKRVLTGFLYALMIGVPLGFLMGYSKAVMNILDPLIDSVRQVPIMAWVPLTIVWFGLGDG 145 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 +F I + V+ + + + NIP+D +RS W F + VP S Sbjct: 146 P--------TVFLIAFAGVFPVILNTIAGVQNIPKDYYNAARSMGAGPWSIFVNVIVPGS 197 Query: 189 MPGLVWNMMMSMSGGWFFVV 208 +P ++ +++ GW V+ Sbjct: 198 LPDILTGGRIAVGLGWMSVI 217 >gi|291618547|ref|YP_003521289.1| ProW [Pantoea ananatis LMG 20103] gi|291153577|gb|ADD78161.1| ProW [Pantoea ananatis LMG 20103] Length = 388 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 + I + ++ I + + I I + A T +L+A++ ++ Sbjct: 140 PVAIALFALIAWQIASPAMGIATL-ISLIAIGAIGAWSQAMITLALVLTALLFCIIIGLP 198 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 199 MGIWLARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 251 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +P DL E S SF S Q + + +P +MP ++ + ++ Sbjct: 252 -LPPIVRLTILGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 310 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRL 356 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 89/279 (31%), Gaps = 30/279 (10%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 + + P+ + + L + L + Q S + I + Sbjct: 108 VVNHFRPVFQSIRVPVDYILSAFQQLLLGMPAPVAIALFALIAWQIASPAMGIATLISLI 167 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 + AW IT+ V+ ++ II +P+GIW+ Sbjct: 168 AIGAIGAWS-------------------QAMITLALVLTALLFCIIIGLPMGIWLARSER 208 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + ++P + PA V+ +V N+ ++ I I+ I G Sbjct: 209 AARIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILGIK 264 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 P D E + SF + + + LP P + G A + +++ + + G Sbjct: 265 QVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG--- 321 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G + + + L+R Sbjct: 322 ----GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRL 356 >gi|114328963|ref|YP_746120.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114317137|gb|ABI63197.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 276 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 107/282 (37%), Gaps = 23/282 (8%) Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ- 362 + L ++ + G + + + +L W+ +A ++ Sbjct: 3 DLSVSLPVSLPAIRSHGGRLSLGLSGHVGRFLLGMGGLGILLAVWWLFTGPLAGAGSFSR 62 Query: 363 ------SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 ++ ++ + D+L +WL ++ RV+V + +A + +P+G+ +G + + Sbjct: 63 RFAPGLALTSLIEMGWHGDLLTHVWL---SLKRVLVGLAVALAVGVPLGLAVGSVRVVEA 119 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 P Q L + P+ V + + L+ F W IL + G Sbjct: 120 ATSPVFQFLRMISPLSWMPVAVMVLGVGDA----PIYFLLSFAAVWPILLSTADGVKQLD 175 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 + +A S T W I+LPG+ +TG A G W + +E+ Sbjct: 176 RRWLLLAQSLAATRWETLTRIVLPGVLAPILTGVRLAIGILWIVLVPAEMLG------VA 229 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWH 575 GLG + ++ ++ ++ E+ VL++ L+ R L+ Sbjct: 230 GGLGYLVLDTRDRMAYGELTAVVLVIGLLGFLLDAIARLLYR 271 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 70/198 (35%), Gaps = 14/198 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+L + ++L R + P+ ++ I L ++ Sbjct: 80 GDLLTHVWLSLKRVLVGLAVALAVGVPLGLAVGSVRVVEAATSPVFQFLRMISPLSWMPV 139 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V+ + F + + VW + S + + R +++S + W+ Sbjct: 140 AVMVLGVG--------DAPIYFLLSFAAVWPILLSTADGVKQLDRRWLLLAQSLAATRWE 191 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P + ++ + +++ W +V +EM+ V G+G + Sbjct: 192 TLTRIVLPGVLAPILTGVRLAIGILWIVLVPAEMLGVAG------GLGYLVLDTRDRMAY 245 Query: 239 LAILYAMLTMLGVIFLYD 256 + +L + + FL D Sbjct: 246 GELTAVVLVIGLLGFLLD 263 >gi|313496595|gb|ADR57961.1| TauC [Pseudomonas putida BIRD-1] Length = 279 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 105/281 (37%), Gaps = 21/281 (7%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 P++ R +R ++ + ++ +L ++W G + S G I Sbjct: 7 PVAGKHDAQTRPAATLRRPLSTRWISTLT---LASLLLVWWLVTAAGWVEPLFLPSPGDI 63 Query: 368 VNH----FTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 ++ T + +W ++ R+ + ++ A++ IPVGI IG+ + P Sbjct: 64 LSKAWTLLTQGYMDASLWQHLGASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLI 123 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P + PL+V L+ LL+ I G Sbjct: 124 EFYRPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRA 179 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S T + R++ILP P +TG G W+ + +E+ + T+GLG Sbjct: 180 AQSLGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFM 233 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + + + VVLG+L++ AL R L L + Sbjct: 234 VQSAAQFLVTDVVVLGILLIALIAFALEMSLRALQRKLVPW 274 Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 101/273 (36%), Gaps = 26/273 (9%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVH-- 59 P RR + + + ++ L+ P DI+ L Sbjct: 17 RPAATLRRPLSTRWISTLTLASLLLVWWLVTAAGWVEPLFLPSPGDILSKAWTLLTQGYM 76 Query: 60 --SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 SL Q+ + R+ A+V + L +R +L P+++ + IP L +L Sbjct: 77 DASLWQHLGASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLP 136 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 V++ EL+ + I+ + + + + + ++S + Sbjct: 137 LIVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATKA 188 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 Q ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 189 QLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLV 242 Query: 238 LLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 243 TDVVVLGILLIALIAFALEMSLRALQRKLVPWH 275 >gi|292489182|ref|YP_003532069.1| glycine betaine/L-proline ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900299|ref|YP_003539668.1| glycine betaine/L-proline ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200147|emb|CBJ47273.1| glycine betaine/L-proline ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291554616|emb|CBA22278.1| Glycine betaine/L-proline ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312173341|emb|CBX81596.1| Glycine betaine/L-proline ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 387 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I L Q ++V + +V + + A T +L+A++ + Sbjct: 134 LLGMPAPVAITVFALIAWQLSSVSMGVATLVSLVAIGAIGAWSQAMVTLALVLTALLFCI 193 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S+R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 194 IIGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 250 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 251 A-----LPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 305 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 306 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356 Score = 90.0 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + +I F + V + + P Sbjct: 96 PLDSWV------TTAIDWIVSHFRPLFQGIRLPVDYILSAFQQLLLGMPAPV-------- 141 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F ++ + ++ +V + + V+ ++ I Sbjct: 142 ---AITVFALIAWQLSSVSMGVATLVSLVAIGAIGAWSQAMVTLAL----VLTALLFCII 194 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 195 IGLPLGIWLARSQRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 250 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + + LP P + G A + Sbjct: 251 ALPPIVRLTILGIKQVPADLVEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 310 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356 >gi|221635657|ref|YP_002523533.1| nitrate transport permease protein NrtB [Thermomicrobium roseum DSM 5159] gi|221157705|gb|ACM06823.1| nitrate transport permease protein NrtB [Thermomicrobium roseum DSM 5159] Length = 271 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 95/236 (40%), Gaps = 13/236 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---GCITMFRVVVLIII 396 ++ ++ +W +G + ++ L + RV V + + Sbjct: 17 IALLVLFWWAATSFLPPVGAFARRFAPEFALRALGELAASGLLWPHLVASAQRVGVGLAL 76 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 ++++ IP+G+ IG P I+ + P QL+ + PL + + + L+ Sbjct: 77 SALLGIPLGVVIGSVPWIARLLGPSLQLVRMVSPLAWMPLALLVFGAGSRS----VVFLI 132 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 + T W I+ + G + V S + W R I+ PGI P + G A G Sbjct: 133 VLATLWPIVLSTADGVMRVDPRWLLVGRSLGASRWELLRTIVWPGIRPRVLGGMRLAVGV 192 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 AW + +E+ +GLG I ++ ++ + E++ +L++ LAL+ Sbjct: 193 AWIVLVPAEMLG------VDSGLGYAILDARDRLDYGELMAVLLVIGMSGLALDGL 242 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 14/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+ + +S L + + +L P L +++ + L ++ Sbjct: 57 GLLWPHLVASAQRVGVGLALSALLGIPLGVVIGSVPWIARLLGPSLQLVRMVSPLAWMPL 116 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F + +F I + +W + S + + V RS S W+ Sbjct: 117 ALLVFGAGSR--------SVVFLIVLATLWPIVLSTADGVMRVDPRWLLVGRSLGASRWE 168 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + P P ++ M +++ W +V +EM+ V G+G I A D Sbjct: 169 LLRTIVWPGIRPRVLGGMRLAVGVAWIVLVPAEMLGVDS------GLGYAILDARDRLDY 222 Query: 239 LAILYAMLTMLGVIFLYDQL 258 ++ +L + D L Sbjct: 223 GELMAVLLVIGMSGLALDGL 242 >gi|121608093|ref|YP_995900.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gi|121552733|gb|ABM56882.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 255 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 + RV+ + A+++ IP+GI++G + + P LL P+ + PL + Sbjct: 64 LASARRVMTGFLAATVVAIPLGIFLGMSRYARAAFDPILSLLRPLPSMSWIPLSLLWFGI 123 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 ++ G L VI A + + W+ R ++LPG Sbjct: 124 TETQKYS----IVFMGCFAPALVYVIEATRNVDPVLIRAAQNLGASRWQVMREVVLPGSL 179 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P ++G G AW I +E+ + GLG I E VVLG++++ Sbjct: 180 PQILSGLKIILGLAWTCVISAELVA------AREGLGFLIMNGKEFFQTEVVVLGMVMIS 233 Query: 564 CFVLALN---RFLWHPLYLY 580 VL + R + L + Sbjct: 234 LTVLLTDVVFRAIGRKLLRW 253 Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 85/230 (36%), Gaps = 17/230 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + +LP + + R+++ + + + SR Sbjct: 40 LPPPSAVWARGLAMASDGALPGHVLASARRVMTGFLAATVVAIPLGIFLGMSRYARAAFD 99 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 PIL +++ +P + ++ ++++F K +F + ++ N+ Sbjct: 100 PILSLLRPLPSMSWIPLSLLWFGITETQKYS--------IVFMGCFAPALVYVIEATRNV 151 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L +++ S WQ + +P S+P ++ + + + W V+++E++ Sbjct: 152 DPVLIRAAQNLGASRWQVMREVVLPGSLPQILSGLKIILGLAWTCVISAELVA------A 205 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSN 268 G+G I + ++ M+ + + L D + + R ++ W Sbjct: 206 REGLGFLIMNGKEFFQTEVVVLGMVMISLTVLLTDVVFRAIGRKLLRWQP 255 >gi|260467171|ref|ZP_05813348.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gi|259029024|gb|EEW30323.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 286 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 20/263 (7%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 + + P S + VS + + + A + + + VI Sbjct: 22 VPWSRPSPKRTGVSARIVSAVTILAVLALWALSARLQLVSPVFLPSPLAVWNKFIVVIRD 81 Query: 383 GCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 G + ++ RV +I A ++ +PVG+ IG P + L P Sbjct: 82 GFVDATLAQHAVASLGRVFAALIAAILVGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLA 141 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + PLV+ + L +++ M+ + + +G + A S T + Sbjct: 142 YLPLVIIWFGIGEPSKILVITIAMLA----PVALSTASGVRGVSQERINAARSLGATHAQ 197 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R++ILP P +TG A G W+ + +E+ + T GLG I + + Sbjct: 198 VVRHVILPSALPSILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVT 251 Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575 VV+G+L++ L + Sbjct: 252 DVVVMGILVIAAIAFVLEFTIRR 274 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 92/214 (42%), Gaps = 17/214 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+A + R+ +A++ ++L S + P+L+ ++ IP L +L Sbjct: 86 ATLAQHAVASLGRVFAALIAAILVGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPL 145 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P K I I + + + S + + ++ +RS + Q Sbjct: 146 VIIWFGIGEPSK--------ILVITIAMLAPVALSTASGVRGVSQERINAARSLGATHAQ 197 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + +++ GW +VA+E++ G+G I A + Sbjct: 198 VVRHVILPSALPSILTGLRIALGAGWSTLVAAELVA------ATRGLGFMIQSAAQFLVT 251 Query: 239 LAILYAMLTMLGVIFLY---DQLLFRPMIVWSNK 269 ++ +L + + F+ + + R + W+ + Sbjct: 252 DVVVMGILVIAAIAFVLEFTIRRIERVFVPWAGR 285 >gi|170724138|ref|YP_001751826.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] gi|169762141|gb|ACA75457.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida W619] Length = 279 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ + ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 85 GASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGI 144 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ LL+ I G A S T + R++ILP Sbjct: 145 GELSK----VLLIYLAIFAPIAIATATGVRTVDPARLRAAQSLGATKVQLIRHVILPSAL 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 201 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIA 254 Query: 564 CFVLALN---RFLWHPLYLY 580 AL R L L + Sbjct: 255 LIAFALEMGLRALQRKLVPW 274 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 102/273 (37%), Gaps = 26/273 (9%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-----QETTVPRDIVDIVPITLDVH-- 59 P +RR + + + ++ L+ P DI+ L Sbjct: 17 RPVEKARRQLATRWISTLTLASLLLVWWLVTAAGWIEPLFLPAPGDILAKAWSLLTQGYM 76 Query: 60 --SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 SL Q+ + R+ A+V + L +R +L P+++ + IP L +L Sbjct: 77 DASLWQHLGASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLP 136 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 V++ EL+ + I+ + + + + + ++S + Sbjct: 137 LIVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPARLRAAQSLGATKV 188 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 Q ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 189 QLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLV 242 Query: 238 LLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 243 TDVVVLGILLIALIAFALEMGLRALQRKLVPWH 275 >gi|11498247|ref|NP_069473.1| nitrate ABC transporter, permease protein (nrtB-2) [Archaeoglobus fulgidus DSM 4304] gi|2649975|gb|AAB90597.1| nitrate ABC transporter, permease protein (nrtB-2) [Archaeoglobus fulgidus DSM 4304] Length = 248 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 107/243 (44%), Gaps = 16/243 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDI------VPITLDVHSLPQYASRTTLRMLSAMVIS 79 V+ L+ + + P ++ ++ P + +L Q+A + R+L+A ++ Sbjct: 6 AFVLIFSWYLISALTDLPHPHEVAEVFFTLLVNPEPVLGKTLVQHAVASLFRVLAASFLA 65 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 ++ +R L + P ++ ++ IP L ++ + F L E++ I Sbjct: 66 FSIAVPLGIISGWNRTLMEFIAPAVEALRPIPPLAWIPLAYIIFAPL----PNTVEVSQI 121 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F +F + S++ N+P +L E++ F+ + VP S+ G++ + + Sbjct: 122 FIVFVGAFFPCFISVFDYARNVPEELLEMAEVFKAPERLIITDIVVPHSLQGIMSGVRIG 181 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI-FLYDQL 258 + GW ++A+EMI G+G +I + A + A + M+G+I ++ + L Sbjct: 182 LGVGWMSIIAAEMIATSGE-----GLGYFIMVMYNVGGRTAEIVAGMAMIGIIGYMMNWL 236 Query: 259 LFR 261 L R Sbjct: 237 LLR 239 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 86/241 (35%), Gaps = 9/241 (3%) Query: 339 RVSYMLDIFWFCVVCGVAI---GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII 395 + +++L W+ + + + ++ + ++ ++FRV+ Sbjct: 4 KGAFVLIFSWYLISALTDLPHPHEVAEVFFTLLVNPEPVLGKTLVQHAVASLFRVLAASF 63 Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 +A I +P+GI G+ + I P + L P + PL + + + Sbjct: 64 LAFSIAVPLGIISGWNRTLMEFIAPAVEALRPIPPLAWIPLAYIIFAPLPNTVEVSQIFI 123 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + +V A P + E+A F I++P ++G G Sbjct: 124 VFVGAFFPCFISVFDYARNVPEELLEMAEVFKAPERLIITDIVVPHSLQGIMSGVRIGLG 183 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK-GSFPEVVLGVLIMCCFVLALNRFLW 574 W + I +E+ + GLG +I G E+V G+ ++ +N L Sbjct: 184 VGWMSIIAAEMIATSGE-----GLGYFIMVMYNVGGRTAEIVAGMAMIGIIGYMMNWLLL 238 Query: 575 H 575 Sbjct: 239 R 239 >gi|324114593|gb|EGC08561.1| inner membrane transport system [Escherichia fergusonii B253] Length = 275 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 R +P + S ++ ++ I+W C + + Q + +V Q + Sbjct: 13 RWRLRWPLSRQLTLSFSVLAVLVTIWWAVTACQLISPLFLPPPQQVLAKLVTIAGAQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 +M R+++ +I A +I IP G+ +G P I + P +L P + P Sbjct: 73 DATLWQHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V P + L L IF + + +AG + A S + Sbjct: 133 LMVIWFGIGE-TPKVLLIWLAIFA---PLAMSALAGVQSVQQVRIRAAQSLGANRVQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 Y+ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 YVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAVIAFLLELSLRALQRRLTPW 270 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 93/216 (43%), Gaps = 17/216 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+L A++ +++ S + +L PI+++ + +P L +L Sbjct: 74 ATLWQHLAASMSRILLALIAAVVIGIPAGVAMGLSPTIRGILDPIIELYRPVPPLAWLPL 133 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F KV+ LA + S + ++ + ++S + Q Sbjct: 134 MVIWFGIGETPKVLLIWLAIFA--------PLAMSALAGVQSVQQVRIRAAQSLGANRVQ 185 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 WY+ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 186 VLWYVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 239 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 +L + + + FL + + L R + W + + Sbjct: 240 DVVLAGIAVIAVIAFLLELSLRALQRRLTPWHGEVK 275 >gi|228946522|ref|ZP_04108837.1| aliphatic sulfonates transport permease protein ssuC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813135|gb|EEM59441.1| aliphatic sulfonates transport permease protein ssuC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 282 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I++FR I + I +G +GF + P Q+L P PL Sbjct: 76 GELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + + LL+ G + + NV G + +VA + + Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNVFLGIRGVDSKLFDVARVLEFSKRKLITK 191 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILP P + GA + G AW + +V+E+ T G+G I ++ + + V Sbjct: 192 LILPATLPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245 Query: 557 LGVLIMCCFVLALNRFL 573 +G++I + + Sbjct: 246 VGIIIFAFVGKFSDSLV 262 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 17/236 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P DI + L + S + R + I + T+ S R L Sbjct: 59 LPTPLDIFVAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + +++++P L V++F KV+ A F + +++ + + Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNVFLGIRGV 170 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L +V+R S + L +P ++P L+ +S+ W +V +E++ Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPATLPNLLLGARLSLGVAWVSLVVAELMG------S 224 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274 GIG I A + + + ++ V D +LL + W + F+ E Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDGFKGET 280 >gi|307946988|ref|ZP_07662323.1| glycine betaine/proline ABC transporter, permease protein [Roseibium sp. TrichSKD4] gi|307770652|gb|EFO29878.1| glycine betaine/proline ABC transporter, permease protein [Roseibium sp. TrichSKD4] Length = 660 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 73/485 (15%), Positives = 155/485 (31%), Gaps = 34/485 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + A +T ++ + ++ L A K R ++ PIL ++Q++P +L V+ Sbjct: 146 WKMAMQTMSVIVVSAPLAFLMGLTLGVAAWKYRWFERMMKPILSVLQTLPFFTYLLPAVI 205 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F G GA FAI M L + ++ E + WQ Sbjct: 206 FFKV---GPTAGAVATITFAIP-----PMILMTTLGLKKVSPEVIEAGHMSGCTRWQMLS 257 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 ++ VP + ++ + ++ +VV I +PG+G+ + + L Sbjct: 258 HVYVPAARTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRS 310 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV-LYLFRKTNFLRFIGY 300 +T++ + + D++ ++ F S + L LF L + Sbjct: 311 FEIGVTIVLLAVMLDRMSKAWVVKQPVHFERGTPWWKRHQVSLIALVLFIGFTLLSQVFP 370 Query: 301 SSWNFFSP------------LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW 348 + + + + N L + + Sbjct: 371 ILAEVGRKQHLSQGKEIDVVIKSFLAIDAIKGTTEWLRWFLNVKVLIPFRNTLLAIPTPA 430 Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGI 406 F ++ I + V + W IT++ V+ + +A+II IP+G+ Sbjct: 431 FILLVVSFSYWVGGRRPGIYAAVFFTVVAFSGWWDRSVITLYTVISAVALAAIIGIPLGV 490 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 S I FP+ ++ + ++ + ++ ++ Sbjct: 491 VAARSSRWSKSILLACDTAQTFPSFIYLIPAIMLFGV----NDVAVVFSILIFAAVPLIR 546 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 I G S+ P + E A T + + P P G A ++ I++ Sbjct: 547 YTIIGLSSVPPEMTEAADMSGSTRRQKLMSVQFPLALPTMAVGFNQAIMFSFFMVIIAAF 606 Query: 527 ASWGH 531 Sbjct: 607 IGTQD 611 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 15/189 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T ++SA+ ++ + +AA+S R ++ D Q+ P +L ++ F Sbjct: 470 TLYTVISAVALAAIIGIPLGVVAARSSRWSKSILLACDTAQTFPSFIYLIPAIMLFGVN- 528 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 ++A +F+I + L ++P ++ E + + QK + P Sbjct: 529 -------DVAVVFSILIFAAVPLIRYTIIGLSSVPPEMTEAADMSGSTRRQKLMSVQFPL 581 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + ++ +F V+ + I D +G + + +L L Sbjct: 582 ALPTMAVGFNQAIMFSFFMVIIAAFIGTQD-------LGQELQRTLAGTELGKNFVLGLN 634 Query: 248 MLGVIFLYD 256 + + +D Sbjct: 635 VSLMALTFD 643 >gi|313894146|ref|ZP_07827711.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] gi|313440970|gb|EFR59397.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] Length = 250 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 10/231 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ L + G + ++ + ++ R + II+ + Sbjct: 12 IAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISVV 71 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + G+ +G+ I + I P Q++ + P +V +++ Sbjct: 72 AGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQA----PAIVIIFIA 127 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + +L + ++ + +VA +F I I+LP +FP +G A G AW Sbjct: 128 AFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIALGTAWI 187 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + E+ TGLG I + +++ +L + L L+ Sbjct: 188 FLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLD 232 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 15/237 (6%) Query: 22 LLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 +A L+ +I L P ++ + L + + + +R +IS+ Sbjct: 11 FIAAWLIWELIVRLGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLVRFFIGYIISV 70 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + + + + PI+ +++ I + +L F V++F + AI Sbjct: 71 VAGVFFGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIG--------QAPAIV 122 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + S ++ NI +V+R+F + + + + +P PG+ + +++ Sbjct: 123 IIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHIAL 182 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 W F+V EM+ G+G I ++ A+LT+ V L D Sbjct: 183 GTAWIFLVTGEMVG------SQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDW 233 >gi|270264393|ref|ZP_06192659.1| transporter [Serratia odorifera 4Rx13] gi|270041529|gb|EFA14627.1| transporter [Serratia odorifera 4Rx13] Length = 278 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R++V ++ A II +PVGI +G + + P ++ P + PL+V Sbjct: 84 AASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGI 143 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + + +AG + A + W+ R+++LP Sbjct: 144 GETSK----ILLIYLAIFAPVALSAVAGVRSVAQVRVRAARALGANRWQVLRFVVLPSAL 199 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 200 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIGVIA 253 Query: 564 CFVLALN---RFLWHPLYLY 580 L R L L + Sbjct: 254 IIAFGLELGLRALQRRLTPW 273 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 105/254 (41%), Gaps = 22/254 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-----HSLPQYASRTTLRMLSAM 76 L+A + G+ + L P+ ++ + + +L Q+ + + R+L A+ Sbjct: 35 LVALAVWWGVTALNLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILVAL 94 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 + +++ + + +L P+++I + +P L +L V++F E Sbjct: 95 LAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIG--------ET 146 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + I I+ + + S + ++ + +R+ + WQ ++ +P ++P ++ + Sbjct: 147 SKILLIYLAIFAPVALSAVAGVRSVAQVRVRAARALGANRWQVLRFVVLPSALPEILTGI 206 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + + GW +VA+E+I G+G + A + +L + + + F + Sbjct: 207 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIGVIAIIAFGLE 260 Query: 257 ---QLLFRPMIVWS 267 + L R + W Sbjct: 261 LGLRALQRRLTPWH 274 >gi|221068270|ref|ZP_03544375.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] gi|220713293|gb|EED68661.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] Length = 414 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + A T +L+++ + L A S P LD MQ+ P +L Sbjct: 183 GIWSEAMVTLALVLTSLFFCIAIGLPVGILLASSDLAQRWTRPFLDAMQTTPAFVYLVPV 242 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V+ F G V G + +FA + + + + DL E SR++ S Q Sbjct: 243 VMLFG---IGNVPGVIVTIVFA-----LPPLIRLTNLGIRQVRPDLIEASRAYGASPAQL 294 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 W + +P +MP ++ + ++ VV + MI VG G+G + I D+ Sbjct: 295 LWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMG 347 Query: 240 AILYAMLTMLGVIFLYDQL 258 L ++ + + D++ Sbjct: 348 LATVGGLGIVLLAIVLDRI 366 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 30/279 (10%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 + +P+ + + L I + L + Q L I + Sbjct: 118 VVDHFRPFFQAVRTPIDATLNGVTDVLQTIPMPALVLLIALLAWQFAGRKLAIGSAVALL 177 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 VA+ W +T+ V+ + I +PVGI + Sbjct: 178 CVALLGIWS-------------------EAMVTLALVLTSLFFCIAIGLPVGILLASSDL 218 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 +PF + PA V+ VV N+ ++ I ++ G Sbjct: 219 AQRWTRPFLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIVFALPPLIRLTNLGIR 274 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 D E + ++ + + + LP P + G A + + +++ + + G Sbjct: 275 QVRPDLIEASRAYGASPAQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG--- 331 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 332 ----GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 366 >gi|206579848|ref|YP_002240248.1| ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290509981|ref|ZP_06549351.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp. 1_1_55] gi|206568906|gb|ACI10682.1| ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289776697|gb|EFD84695.1| sulfonate/nitrate/taurine transport system permease [Klebsiella sp. 1_1_55] Length = 247 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 78/194 (40%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ I++ RV V + +A I+ IP G+ +G P Q L + P+ Sbjct: 52 GELVRNIAISLSRVAVGLGLALIVGIPCGLLMGCSAASERLAMPALQFLRMISPLSWMPV 111 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + + L+ F W +L N +G P + +A S T + Sbjct: 112 AVMLLGIGDR----PIWFLLSFAAVWPVLLNTASGVRQLPPGWLLLARSLSATRRETLWH 167 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 IILPG+ + +TG A G W + E+ ++GLG I ++ ++ + ++ Sbjct: 168 IILPGVRAHILTGVRLAIGILWIVLVPCEMLG------VSSGLGYAILDARDRLDYSALM 221 Query: 557 LGVLIMCCFVLALN 570 ++ + ++ Sbjct: 222 AVIVTIGAIGFLMD 235 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 87/231 (37%), Gaps = 14/231 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + G I G+ P + + + L L + + + R+ + ++L+ Sbjct: 21 IWGAITHFAGGMAGLFAPENALRSLQEMLAQGELVRNIAISLSRVAVGLGLALIVGIPCG 80 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L S + +P L ++ I L ++ V+ F + + V Sbjct: 81 LLMGCSAASERLAMPALQFLRMISPLSWMPVAVMLLGIGDRPIW--------FLLSFAAV 132 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + + + +P ++RS + + W++ +P ++ + +++ W + Sbjct: 133 WPVLLNTASGVRQLPPGWLLLARSLSATRRETLWHIILPGVRAHILTGVRLAIGILWIVL 192 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 V EM+ V G+G I A D A++ ++T+ + FL D L Sbjct: 193 VPCEMLGVSS------GLGYAILDARDRLDYSALMAVIVTIGAIGFLMDWL 237 >gi|325122701|gb|ADY82224.1| binding-protein-dependent transport systems inner membrane component [Acinetobacter calcoaceticus PHEA-2] Length = 279 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + L L + +T R+L +I ++A S+ L P ++SIP L Sbjct: 72 LDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 ++ +++ K+ + A F +T + ++ N+ R L EV + +R Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDRKLIEVGKVYR 183 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ +Q+ + +P + PG++ + S+S W F++A+E+I GIG ++ Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + ++ A++ + + + D L+ + + W ++R Sbjct: 238 ETSRPDIVIIAIILLALLGKITDTLM-KLIENWFLRWR 274 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I+ +RV+ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 79 LFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + L+ G + N +A EV + + ++ II Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDRKLIEVGKVYRLNAFQRIISII 194 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 LP P +TG + +W I +E+ + T G+G +++ E Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238 >gi|318081537|ref|ZP_07988853.1| binding-protein-dependent transporter inner membrane component [Streptomyces sp. SA3_actF] Length = 270 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 81/211 (38%), Gaps = 13/211 (6%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ RV++ ++ ++ +PVG +G+ P + + ++P+ Q A P PL Sbjct: 70 GSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPL 129 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + ++ + + + G +A + A + Sbjct: 130 AIVLLGIGET----PKVFVIFLASFLATVVAALQGVTATDRTLIDAARVLGAPDRVIFLK 185 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++P P+ + GA G +W + +E+ + GLG + + P + Sbjct: 186 VVIPASTPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIF 239 Query: 557 LGVLIMCCFVLALNRFLWHP---LYLYGTRC 584 +G+L + L ++R L L + R Sbjct: 240 VGLLTIGVVGLVMDRLLLRAERHLTSWQERR 270 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 17/240 (7%) Query: 33 NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92 + G+ + P + + SL + R+L V+ ++ L Sbjct: 44 VLAATGLVDVPGPWPVARRAGEMIADGSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGW 103 Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 + +L P + +++P L + +V K +F IF + Sbjct: 104 YPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGETPK--------VFVIFLASFLATVV 155 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Q + R L + +R F + +P S P L+ + + W +VA+E+ Sbjct: 156 AALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAEL 215 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269 I G+G + A DL I +LT+ V + D+LL R + W + Sbjct: 216 IA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLRAERHLTSWQER 269 >gi|325673723|ref|ZP_08153414.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|325555744|gb|EGD25415.1| taurine ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 272 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 75/190 (39%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 + RV+ ++A+ + IP+G+ +G + ++ L+ P + PL + + Y Sbjct: 78 AASTLRVLNGFLLAAALAIPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPLTLLIIGY 137 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+ + IL N G + P E A+ + I++P Sbjct: 138 GDRS----TIFLIFVAAFFPILLNTTVGVAQVPQRLLEAAAMLGTPKAKTLYKIVIPSAM 193 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 +G A G +W +V E +TGLGA I ++ + ++ G++ + Sbjct: 194 QSITSGLRIALGLSWVVLVVGETVGI------STGLGAMITQARDMSRTDLIIAGMVFIG 247 Query: 564 CFVLALNRFL 573 +RF+ Sbjct: 248 LAGFVTDRFM 257 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 82/201 (40%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL ++ + +TLR+L+ +++ L + + L +++++ IP+ + Sbjct: 71 GSLWRHLAASTLRVLNGFLLAAALAIPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPL 130 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 T++ + + IF IF + + + + + +P+ L E + + Sbjct: 131 TLLIIGYG--------DRSTIFLIFVAAFFPILLNTTVGVAQVPQRLLEAAAMLGTPKAK 182 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + +P +M + + +++ W +V E + + G+G+ I A Sbjct: 183 TLYKIVIPSAMQSITSGLRIALGLSWVVLVVGETVGIST------GLGAMITQARDMSRT 236 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ M+ + F+ D+ + Sbjct: 237 DLIIAGMVFIGLAGFVTDRFM 257 >gi|28211936|ref|NP_782880.1| putative glycine-betaine binding permease protein [Clostridium tetani E88] gi|28204379|gb|AAO36817.1| putative glycine-betaine binding permease protein [Clostridium tetani E88] Length = 275 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 105/233 (45%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++VI + +L + + + V + +D L +T +L + +I+LL Sbjct: 50 IVVIILFALLAYKLADKRVAIFTF-VGLFFIDSMQLWNQTMQTLALVLVSALIALLIGVP 108 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 + ++A++ + +L PILD MQ++P +L V++F GKV GA IF++ + Sbjct: 109 FGIMSARNEKANKILRPILDFMQTMPAFVYLIPAVLFFGM---GKVPGAIATVIFSMPPA 165 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + +P ++ E ++SF + Q + + +P ++P ++ + ++ Sbjct: 166 -----VRLTNLGIRQVPDEVVEAAKSFGSTPKQMLYKVQLPIALPTILAGVNQTIMLALS 220 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV S MI G G+G + I + + + L ++ + + D++ Sbjct: 221 MVVVSAMIGAG-------GLGREVYQGITQLKIGQGFESGLAVVILAMILDRM 266 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 77/230 (33%), Gaps = 13/230 (5%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 ++ I F ++ ++ + D + + T+ V+V +IA +I + Sbjct: 50 IVVIILFALLAYKLADKRVAIFTFV--GLFFIDSMQLWNQTMQTLALVLVSALIALLIGV 107 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P GI + ++P + PA V+ V + + + + Sbjct: 108 PFGIMSARNEKANKILRPILDFMQTMPAFVYLIPAVLFFGMGKVPGAIATVIF----SMP 163 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G P++ E A SF T + + LP P + G A + + Sbjct: 164 PAVRLTNLGIRQVPDEVVEAAKSFGSTPKQMLYKVQLPIALPTILAGVNQTIMLALSMVV 223 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 VS + G GLG + + + + L + + L+R Sbjct: 224 VSAMIGAG-------GLGREVYQGITQLKIGQGFESGLAVVILAMILDRM 266 >gi|28898501|ref|NP_798106.1| glycine betaine/L-proline transport system permease [Vibrio parahaemolyticus RIMD 2210633] gi|153836267|ref|ZP_01988934.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AQ3810] gi|260365056|ref|ZP_05777627.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus K5030] gi|260879548|ref|ZP_05891903.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AN-5034] gi|260894977|ref|ZP_05903473.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus Peru-466] gi|260901013|ref|ZP_05909408.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AQ4037] gi|28806719|dbj|BAC59990.1| glycine betaine/L-proline transport system permease [Vibrio parahaemolyticus RIMD 2210633] gi|149750542|gb|EDM61287.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AQ3810] gi|308086053|gb|EFO35748.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus Peru-466] gi|308093320|gb|EFO43015.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AN-5034] gi|308110813|gb|EFO48353.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus AQ4037] gi|308111687|gb|EFO49227.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio parahaemolyticus K5030] Length = 361 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T +L+++ LL A+S+ + PILD MQ+ P +L V+ F Sbjct: 139 AMTTLALVLTSVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 198 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA + + + +P +L E SF + Q + + Sbjct: 199 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 250 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ VV + MI VG G+G + I D+ Sbjct: 251 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 303 Query: 245 MLTMLGVIFLYDQL 258 L ++ + L D++ Sbjct: 304 GLGIVILAILLDRI 317 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 ++ + +AWQ + + T ++++ +G T+ V+ + +I +P+G Sbjct: 102 IMVLILFLLAWQFSNFKLGLSTLVSLVFIGLIGAWSQAMTTLALVLTSVFFCLLIGLPMG 161 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+ + ++P + PA V+ +V N+ ++ I ++ Sbjct: 162 IWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVV 217 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 I G P + E SF + I LP P + G + + +++ Sbjct: 218 RLTILGIQQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIAS 277 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G L + + L+R Sbjct: 278 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317 >gi|146309344|ref|YP_001189809.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] gi|145577545|gb|ABP87077.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] Length = 276 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 91/221 (41%), Gaps = 14/221 (6%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 + P + + + L ++ + + LR+ + I V T SRR Sbjct: 49 AHQMPAPSQVAQTLYLLAQSGELWRHLNASLLRVSAGFAIGAALAIVIGTWVGLSRRAEA 108 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 L P +++IP L ++ +++ K++ L A F ++ ++ + Sbjct: 109 YLEPTFQALRAIPSLAWVPLLLLWLGIDETPKIVLIALGAFFPVY--------LALLAGI 160 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 NI R L EV R + LS + +P ++P L + ++S W F+VA+E+I Sbjct: 161 RNIDRKLVEVGRLYGLSSLALVRRILLPAALPSLFTGLRGALSLSWMFLVAAELIA---- 216 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G ++ + ++ A+L + + L D LL Sbjct: 217 --ATRGLGYLLSDGRETSRPDLVIAAILLLALLGKLSDSLL 255 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 10/164 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV I + + I +G W+G + ++P Q L A P+ + PL++ + Sbjct: 77 ASLLRVSAGFAIGAALAIVIGTWVGLSRRAEAYLEPTFQALRAIPSLAWVPLLLLWLGI- 135 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +L+ G + + ++AG EV + ++ R I+LP P Sbjct: 136 ---DETPKIVLIALGAFFPVYLALLAGIRNIDRKLVEVGRLYGLSSLALVRRILLPAALP 192 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 TG A +W + +E+ + T GLG +++ E Sbjct: 193 SLFTGLRGALSLSWMFLVAAELIA------ATRGLGYLLSDGRE 230 >gi|206577481|ref|YP_002239418.1| aliphatic sulfonates ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288936268|ref|YP_003440327.1| binding-protein-dependent transporters inner membrane component [Klebsiella variicola At-22] gi|290510676|ref|ZP_06550046.1| aliphatic sulfonates transport permease ssuC [Klebsiella sp. 1_1_55] gi|206566539|gb|ACI08315.1| aliphatic sulfonates ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288890977|gb|ADC59295.1| binding-protein-dependent transport systems inner membrane component [Klebsiella variicola At-22] gi|289777392|gb|EFD85390.1| aliphatic sulfonates transport permease ssuC [Klebsiella sp. 1_1_55] Length = 263 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 107/259 (41%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V+V + + + + P ++ L Q+ + ++ R L I Sbjct: 19 VGTVIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQHLAISSWRALVGFAIGGS 78 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 V ++ SR +L + +++++P L + +++F E A IF Sbjct: 79 IGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ETAKIFL 130 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + ++ + + + + NI R L E++RS+ LSG+ F ++ +P ++P ++ + ++ Sbjct: 131 VSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPSIMVGVRFALG 190 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W ++ +E I GIG A + ++ A++ + L D QL Sbjct: 191 LMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVVAIILYAILGKLADVCAQL 244 Query: 259 LFRPMIVWSNKFRLERTTG 277 L R + W+ + L+ Sbjct: 245 LERLWLRWNPAYHLQEANA 263 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 86/249 (34%), Gaps = 26/249 (10%) Query: 350 CVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 +V +A + W S + + T + I+ +R +V I I + Sbjct: 22 VIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQHLAISSWRALVGFAIGGSIGL 81 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 +G+ G + Q+L P PLV+ L+ GT + Sbjct: 82 VLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DETAKIFLVSLGTLF 137 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I N G E+A S+ ++G+ +R++ILPG P + G A G W I Sbjct: 138 PIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPSIMVGVRFALGLMWLTLI 197 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------LALNRFL-- 573 V+E S G+G + E VV+ +++ L R Sbjct: 198 VAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILYAILGKLADVCAQLLERLWLR 251 Query: 574 WHPLYLYGT 582 W+P Y Sbjct: 252 WNPAYHLQE 260 >gi|260173414|ref|ZP_05759826.1| putative glycine betaine transport system permease protein [Bacteroides sp. D2] gi|315921686|ref|ZP_07917926.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695561|gb|EFS32396.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 274 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L + I+ + + I ++ + L + +T +LS+ ++L Sbjct: 41 LFGIPFYLTILALAAIAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 +F A S R +L PILD+MQ++P +L V++F G V G IF Sbjct: 101 IFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFFGL---GTVPGVFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 84.2 bits (207), Expect = 6e-14, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 84/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + IAW G ++ FT +L + +G T+ V+ + Sbjct: 39 HILFGIPFYLTILALAAIAWVKAGRGISIFTVLGLLLIYGMGFWEATMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I +P+GIW P ++P L+ PA V+ V + + Sbjct: 99 ALIFGVPLGIWTANSPRADKILRPILDLMQTMPAFVYLIPAVLFFGLGTVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|319794068|ref|YP_004155708.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gi|315596531|gb|ADU37597.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 389 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 17/232 (7%) Query: 29 IGIINILLHGIQETTVPRDIVDIVPITLDVHSL--PQYASRTTLRMLSAMVISLLFTFVY 86 + +I ++ + + L V L A T +L+++V ++ Sbjct: 124 LAMIALIGLFAWQFAGRALAIGTTVALLLVAMLGIWPEAMVTLSLVLTSLVFCMVIGLPL 183 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L A S R V+ P+LD MQ+ P +L V+ F G V G + IFA+ Sbjct: 184 GVLLASSDRAQRVMRPVLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIIFALA--- 237 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + L + DL E +R++ S WQ + +P +MP ++ + ++ Sbjct: 238 --PLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSM 295 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + D+L Sbjct: 296 VVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRL 340 Score = 87.7 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 86/269 (31%), Gaps = 12/269 (4%) Query: 304 NFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQS 363 L V+ +R + L + + + Sbjct: 84 WINQGLGWVVEHFRPFFQTVRLPIDSTLNWVQGLLTGLPTLAMIALIGLFAWQFAGRALA 143 Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 IG V +L + +T+ V+ ++ +I +P+G+ + ++P Sbjct: 144 IGTTVALLLVA-MLGIWPEAMVTLSLVLTSLVFCMVIGLPLGVLLASSDRAQRVMRPVLD 202 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 + PA V+ VV N+ ++ I ++ G D E A Sbjct: 203 AMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEAA 258 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 ++ + W+ + LP P + G A + + +++ + + G GLG + Sbjct: 259 RAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMV 311 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +G L + ++L+R Sbjct: 312 LRGIGRLDMGLATVGGLGIVLLAISLDRL 340 >gi|260596732|ref|YP_003209303.1| taurine transport system permease tauC [Cronobacter turicensis z3032] gi|260215909|emb|CBA28473.1| Taurine transport system permease protein tauC [Cronobacter turicensis z3032] Length = 230 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R++ ++ A++I IPVGI +G P + + + P +L P + PL+V Sbjct: 36 GASLGRMLTALLAAALIGIPVGIAMGLNPTLRAILDPLIELYRPIPPLAYLPLMVIWFGI 95 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + + +AG + A S + W+ Y+ILPG Sbjct: 96 GETSK----VLLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRWQLLWYVILPGAL 151 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 152 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIA 205 Query: 564 CFVLALN---RFLWHPLYLY 580 L R L L + Sbjct: 206 LVAFILELGLRALTRRLTPW 225 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 17/218 (7%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 P +L + + RML+A++ + L + L +L P++++ + IP Sbjct: 23 PQGFMDATLWAHLGASLGRMLTALLAAALIGIPVGIAMGLNPTLRAILDPLIELYRPIPP 82 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 L +L V++F KV+ LA + S + + + + ++S Sbjct: 83 LAYLPLMVIWFGIGETSKVLLIYLAIFAPVAMSAL--------AGVKSAQQVRIRAAQSL 134 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 S WQ WY+ +P ++P ++ + + + GW +VA+E+I G+G + A Sbjct: 135 GASRWQLLWYVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 188 Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 + +L + + V F+ + + L R + W Sbjct: 189 GEFLATDVVLAGIAVIALVAFILELGLRALTRRLTPWH 226 >gi|254502512|ref|ZP_05114663.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222438583|gb|EEE45262.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 278 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 100/232 (43%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++ ++ +++ + T + + + + RT + +++++ Sbjct: 44 PIILAVLVGIVYLMSRNTKITIGSLVALCVIGYLGMWEDTMRTIAMVTVCTMMAIVLGIP 103 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L A+S R+ ++ P+LD+MQ++P +L V+ F GKV G I+AI Sbjct: 104 LGILMARSDRIQSIINPVLDLMQTMPSFVYLIPVVMIFGL---GKVPGMIAVVIYAIP-- 158 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 M + + D+ E + +F S WQK + +P ++P ++ + ++ Sbjct: 159 ---PMIRLTNLGIRLVDTDVLEAADAFGSSSWQKLTNVQLPLALPTIMAGVNQTIMMALA 215 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + +I V G+G + AI Q L + L ++ + ++D+ Sbjct: 216 MVVVAALIGV-------KGLGQPVLNAIANQYLTMGVMNGLAIVAIAIIFDR 260 Score = 75.3 bits (184), Expect = 3e-11, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 11/186 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V V ++A ++ IP+GI + I S I P L+ P+ V+ VV Sbjct: 86 TIAMVTVCTMMAIVLGIPLGILMARSDRIQSIINPVLDLMQTMPSFVYLIPVVMIFGLGK 145 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + + I ++ G D E A +F + W+ + LP P Sbjct: 146 VPGMIAVVIYAIP----PMIRLTNLGIRLVDTDVLEAADAFGSSSWQKLTNVQLPLALPT 201 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G A +V+ + GLG + + V+ L + Sbjct: 202 IMAGVNQTIMMALAMVVVAALIG-------VKGLGQPVLNAIANQYLTMGVMNGLAIVAI 254 Query: 566 VLALNR 571 + +R Sbjct: 255 AIIFDR 260 >gi|299769519|ref|YP_003731545.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter sp. DR1] gi|298699607|gb|ADI90172.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter sp. DR1] Length = 279 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + L L + +T R+L +I V+A S+ L P ++SIP L Sbjct: 72 LDLAHSDLFAHIYISTWRVLLGFIIGSGLGLVFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 ++ +++ K+ + A F +T + ++ N+ R L EV + +R Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDRKLIEVGKVYR 183 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ +Q+ + +P + PG++ + S+S W F++A+E+I GIG ++ Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + ++ A++ + + + D L+ + + W ++R Sbjct: 238 ETSRPDIVIIAIILLALLGKVTDTLM-KLIENWLLRWR 274 Score = 113 bits (284), Expect = 7e-23, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 10/170 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I+ +RV++ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 79 LFAHIYISTWRVLLGFIIGSGLGLVFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + L+ G + N +A EV + + ++ II Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDRKLIEVGKVYRLNAFQRIISII 194 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 LP P +TG + +W I +E+ + T G+G +++ E Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238 >gi|318058231|ref|ZP_07976954.1| binding-protein-dependent transporter inner membrane component [Streptomyces sp. SA3_actG] Length = 271 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 95/270 (35%), Gaps = 22/270 (8%) Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ---------DVL 377 P +R+ + +V G+ + + G + + Sbjct: 12 VPAKGPAPRRARRLPPAPLLNLLALVLGLGVWWVLAATGLVDVPGPWPVARRAGEMIADG 71 Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ ++ RV++ ++ ++ +PVG +G+ P + + ++P+ Q A P PL Sbjct: 72 SLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPLA 131 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + + ++ + + + G +A + A + + Sbjct: 132 IVLLGIGET----PKVFVIFLASFLATVVAALQGVTATDRTLIDAARVLGAPDRVIFLKV 187 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ++P P+ + GA G +W + +E+ + GLG + + P + + Sbjct: 188 VIPASTPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIFV 241 Query: 558 GVLIMCCFVLALNRFLWHP---LYLYGTRC 584 G+L + L ++R L L + R Sbjct: 242 GLLTIGVVGLVMDRLLLRAERHLTSWQERR 271 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 17/240 (7%) Query: 33 NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92 + G+ + P + + SL + R+L V+ ++ L Sbjct: 45 VLAATGLVDVPGPWPVARRAGEMIADGSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGW 104 Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 + +L P + +++P L + +V K +F IF + Sbjct: 105 YPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGETPK--------VFVIFLASFLATVV 156 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Q + R L + +R F + +P S P L+ + + W +VA+E+ Sbjct: 157 AALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAEL 216 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269 I G+G + A DL I +LT+ V + D+LL R + W + Sbjct: 217 IA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLRAERHLTSWQER 270 >gi|311112824|ref|YP_003984046.1| nitrate/sulfonate/bicarbonate ABC transporter membrane protein [Rothia dentocariosa ATCC 17931] gi|310944318|gb|ADP40612.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Rothia dentocariosa ATCC 17931] Length = 317 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 94/254 (37%), Gaps = 16/254 (6%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY------IVNHFTYQDVLYV 379 + + + V +L + + G++ + ++ I F + Sbjct: 60 RVNTSVKRFSPKKLVGLLLPVALIALWYGLSTAGVFTAVQLPSPTKVIAAGFELAQRGDL 119 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 + I+ RV++ +I +++ + +G IG P L A P+ + PL++ Sbjct: 120 LTHVAISTQRVLLGFLIGAVLGLVLGALIGISVPARLVAAPTIGALRAVPSLAWVPLLLL 179 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 V + L+ G + + V A + E A +F + G R + + L Sbjct: 180 WVGIGENSK----VTLVAIGAFFPVYTTVSAALAHVDVKLVEAARAFGLKGIRLFTTVQL 235 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P + P V+G A AW + +E+ + GLG + +S G ++L + Sbjct: 236 PAVLPSVVSGLRLALAQAWLFLVAAELLG------ASMGLGYLLTDSQNNGRTDRLLLSI 289 Query: 560 LIMCCFVLALNRFL 573 +++ + + Sbjct: 290 VLLAILGKLTDALI 303 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 104/250 (41%), Gaps = 14/250 (5%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 F +++ + + L G+ + + P ++ L + + +T Sbjct: 68 FSPKKLVGLLLPVALIALWYGLSTAGVFTAVQLPSPTKVIAAGFELAQRGDLLTHVAIST 127 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R+L +I + V L S +V P + ++++P L ++ +++ Sbjct: 128 QRVLLGFLIGAVLGLVLGALIGISVPARLVAAPTIGALRAVPSLAWVPLLLLWVGIGENS 187 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 KV + A F ++T+ + +L ++ L E +R+F L G + F + +P + Sbjct: 188 KVTLVAIGAFFPVYTT--------VSAALAHVDVKLVEAARAFGLKGIRLFTTVQLPAVL 239 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P +V + ++++ W F+VA+E++ G+G + + +L +++ + Sbjct: 240 PSVVSGLRLALAQAWLFLVAAELLGAS------MGLGYLLTDSQNNGRTDRLLLSIVLLA 293 Query: 250 GVIFLYDQLL 259 + L D L+ Sbjct: 294 ILGKLTDALI 303 >gi|327440575|dbj|BAK16940.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Solibacillus silvestris StLB046] Length = 270 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 94/233 (40%), Gaps = 17/233 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P I I L LP + + R++ ++ L + S+ ++ Sbjct: 51 LPTPLKIASTFWILLANGELPVHFLASGQRVIFGFLLGALTAIILGIATGFSKIAQQLID 110 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L +++++P+L + +++F GKV+ L A F ++ +++ + + Sbjct: 111 PSLQMLRTVPLLSLIPLFILWFGVGEFGKVLMIALGAFFPVYV--------NIFLGIRLV 162 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L EV+ + S +K L P +MP L+ + ++M W +V SEM+ Sbjct: 163 DQKLYEVTGILQYSFKEKLTKLIFPSAMPNLLLGLRLAMGTSWLVLVVSEMMGASA---- 218 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271 GIG I A + ++ + + D L + + + W + ++ Sbjct: 219 --GIGYMIQDARAYSQTDIVFVGLILFIILGKFTDSLVGSIEKRALKWRDTYK 269 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 65/190 (34%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 + RV+ ++ ++ I +GI GF I P Q+L P PL + Sbjct: 75 LASGQRVIFGFLLGALTAIILGIATGFSKIAQQLIDPSLQMLRTVPLLSLIPLFILWFGV 134 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L++ G + + N+ G EV + +I P Sbjct: 135 G----EFGKVLMIALGAFFPVYVNIFLGIRLVDQKLYEVTGILQYSFKEKLTKLIFPSAM 190 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G +W +VSE+ + G+G I ++ V +G+++ Sbjct: 191 PNLLLGLRLAMGTSWLVLVVSEMMG------ASAGIGYMIQDARAYSQTDIVFVGLILFI 244 Query: 564 CFVLALNRFL 573 + + Sbjct: 245 ILGKFTDSLV 254 >gi|302555889|ref|ZP_07308231.1| binding-protein-dependent transport system inner membrane component [Streptomyces viridochromogenes DSM 40736] gi|302473507|gb|EFL36600.1| binding-protein-dependent transport system inner membrane component [Streptomyces viridochromogenes DSM 40736] Length = 667 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 76/520 (14%), Positives = 157/520 (30%), Gaps = 50/520 (9%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL 61 F+ ++ + R P L V + G ++ + + + L + L Sbjct: 101 FVQELISQPGAGRPVP-QIGWLGVVGIAGYLSWAVGNWRVALLAVAGFTF----LGLQGL 155 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 Q + T +SA+ ++LLF A S R ++ P LD MQ++P +L + Sbjct: 156 WQESMDTLALTVSAVFVALLFAIPLGVWAGLSDRFHRIVTPFLDFMQTMPTFVYLAPLTL 215 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F+ I + A ++ ++P E + S + Q Sbjct: 216 FFLIGPASATIATAIYAAPPAIRI--------TAHAIRSVPETTVEAADSLGATRRQALL 267 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P S +V + ++ V + +I PG+G + A++ D+ Sbjct: 268 KVLLPMSRRTVVMGVNQTIMAALAMVTIAALI-------DAPGLGKTVVQALQSLDVGTA 320 Query: 242 LYAMLTMLGVIFLYDQL-------------LFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 A L ++ + + D++ P++ W + + VL Sbjct: 321 FNAGLAIVVMAIVLDRVTTAASARADTARGSGSPLLKWR-----RQLLAAGGVAALVLVY 375 Query: 289 FRKTNFLRFIGYSSWNFFSPLSNNV--------KKLCRTLGVIRFHFPENFLQLCSNQRV 340 T S ++ L R L Sbjct: 376 LSHTYVWAAEFPGEGATGSSIAKTAADVTTWAQDNLSGLTNAFRDALTNALLNPFQALLT 435 Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 + +V A+ W++ V T+ V ++ ++ Sbjct: 436 DSPWWLVGAALVAVGAVLGGWRAGATTAVCVGLLVATGVWSDAMTTLASTAVATVLVMLL 495 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 + +G+W+G + ++P P V+ ++ + + Sbjct: 496 GVVLGVWMGRSALVDRLLRPSLDAAQVMPPFVYLVPFLALFGATRFTAIVAAVVYAAPVA 555 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 I G A P E A+S W+ + LP Sbjct: 556 IKII----ADGVRAVPATTVEAATSTGCNTWQIITKVQLP 591 >gi|145295416|ref|YP_001138237.1| hypothetical protein cgR_1353 [Corynebacterium glutamicum R] gi|140845336|dbj|BAF54335.1| hypothetical protein [Corynebacterium glutamicum R] Length = 260 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + W ++ RV++ ++A+II +PVG +G I + P Q+L + PL + Sbjct: 66 IFWHLMSSLRRVLLGFLVAAIIPLPVGFLLGRSTTIRWAVDPLVQVLRPVSPLAWLPLGL 125 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + + +++ W IL N I + +A + W YI Sbjct: 126 ALLK----DAENTAMFVIVLSALWPILINTIDAVRNVNPTYINLADTIGTPWWSRIIYIW 181 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +TG + AW +V+E+ G G+G ++ + + +V+ Sbjct: 182 LPASLPGIITGLRLSLSTAWLVIVVAEMLVGG------RGIGFFVWNAWNRLDIDAIVVA 235 Query: 559 VLIMCCFVLALNRFL 573 ++I+ L L+ + Sbjct: 236 IVIIGITGLILDHLI 250 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 89/197 (45%), Gaps = 14/197 (7%) Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R+L +++ + L +S + + P++ +++ + L +L + Sbjct: 68 WHLMSSLRRVLLGFLVAAIIPLPVGFLLGRSTTIRWAVDPLVQVLRPVSPLAWLPLGLAL 127 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 + AE A+F I S +W + + ++ N+ ++ + W + Y Sbjct: 128 LKD--------AENTAMFVIVLSALWPILINTIDAVRNVNPTYINLADTIGTPWWSRIIY 179 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P S+PG++ + +S+S W +V +EM+V G GIG ++ A D+ AI+ Sbjct: 180 IWLPASLPGIITGLRLSLSTAWLVIVVAEMLVGG------RGIGFFVWNAWNRLDIDAIV 233 Query: 243 YAMLTMLGVIFLYDQLL 259 A++ + + D L+ Sbjct: 234 VAIVIIGITGLILDHLI 250 >gi|126731790|ref|ZP_01747594.1| ABC transporter permease protein [Sagittula stellata E-37] gi|126707617|gb|EBA06679.1| ABC transporter permease protein [Sagittula stellata E-37] Length = 645 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 86/558 (15%), Positives = 179/558 (32%), Gaps = 42/558 (7%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 V G+ L +G + + V L + A T + +V+ Sbjct: 102 VTGVAVFLTYGASGRGLAI-LTAATLAYFAVFGLWEDAMLTVASVAFIVVVGFAIGLALG 160 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 TL + RL V PI D+MQ++PI +L V+ L+A+ + Sbjct: 161 TLIWRHPRLETVFSPIFDVMQTLPIFSYLVPVVLLVG--------FGPLSAVIVTLVFSL 212 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 M + +L +P ++ E+ S Q + +P + GL+ + + V Sbjct: 213 PPMARATVLALRQVPPEIRELGDMTGASQGQYILKMLIPSAKTGLMIGLNQLIMTTLAMV 272 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 + + MI G G+G + +++ L + L + + + + + Sbjct: 273 ILASMIGAG-------GLGGEVLQSLQILRFGRGLESGLAITLLAIVLYRYGS---ALAH 322 Query: 268 NKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCR--------- 318 + R + T+ + + V L + + + + L+ + L Sbjct: 323 RRPRHDATSTLGRDLAIVGALIALPSLAGLLWPVAQRYPEALTITSEPLWSGAIDFVNLH 382 Query: 319 ---TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 L +R N L + + + Sbjct: 383 SGEKLEALRVFLSLNLLIPLRGAIMGMGWASVALALCLVGWAASGPRLAIASAAVIAIIA 442 Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 IT+ V+V +++ I +P GIW S I L+ P+ V+ Sbjct: 443 ATGYWERAVITVHLVLVGVLLGIAIGVPFGIWSALSRRAKSVIDVAVDLIQTLPSLVYLV 502 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 +V + ++ L ++ ++ Y + P+ E S T + +R Sbjct: 503 PIVMLLGPGDVSAVLAIAAYVVGAVIRY----CDHALRSAPDSLIEAVRSTGATEAQVFR 558 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 + LP P + G A + +V+ + T GL + + Sbjct: 559 IVRLPFAVPGLLLGLNQAIMLGISMVVVTALVG-------TRGLEQETITALARVDPGRG 611 Query: 556 VLGVLIMCCFVLALNRFL 573 ++ ++C + ++R L Sbjct: 612 LVAGAMVCLIAITIDRLL 629 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 93/311 (29%), Gaps = 48/311 (15%) Query: 261 RPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL 320 RP+I W+ +F + S + + + P + + L + Sbjct: 53 RPLIAWTREFSAYVNIPLEFLQSLL----------------TKGWLIPGATAAETL--RI 94 Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 + + + L I + A+ W+ Sbjct: 95 PSLSWLSVTGVAVFLTYGASGRGLAILTAATLAYFAVFGLWED----------------- 137 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +T+ V ++++ I + +G I P + + P ++ P + VV Sbjct: 138 --AMLTVASVAFIVVVGFAIGLALGTLIWRHPRLETVFSPIFDVMQTLPIFSYLVPVVLL 195 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 V + L+ + + + + + P + +E+ + ++ +++P Sbjct: 196 VGFGPLSAVIVTLVF----SLPPMARATVLALRQVPPEIRELGDMTGASQGQYILKMLIP 251 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 + G I++ + G GLG + +S + F + L Sbjct: 252 SAKTGLMIGLNQLIMTTLAMVILASMIGAG-------GLGGEVLQSLQILRFGRGLESGL 304 Query: 561 IMCCFVLALNR 571 + + L R Sbjct: 305 AITLLAIVLYR 315 >gi|152981359|ref|YP_001354307.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] gi|151281436|gb|ABR89846.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Janthinobacterium sp. Marseille] Length = 296 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 85/237 (35%), Gaps = 14/237 (5%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 LA + + + L P + L L + S + R+ S I + Sbjct: 55 LAVLGFVEVAAQLGWIQARLLPPPSEIVQTLSALLEQGLLVHISASVARVFSGYAIGAVL 114 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 ++ S+ P +++IP L ++ +++F K I I Sbjct: 115 AILFGLFVGLSKHAEAFFEPTFQALRAIPSLAWVPLLLLWFGIDETPK--------ITLI 166 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + + N+ R L E+ + LS + +P ++P L + +S Sbjct: 167 AIGAFFPIYLGLVSGIRNVDRKLIELGEIYGLSAPALARRIVLPAALPSLFTGLRNGLSL 226 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W F+VA+E+I GIG + + +L A+ + + L D LL Sbjct: 227 AWMFLVAAELIA------ATKGIGYLLTDGRETSRPDVVLAAIFLLAILGKLTDGLL 277 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 18/249 (7%) Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLY------VIWLGC 384 + +++ ++ I V+ V + + W + L ++ Sbjct: 39 PVAKARKLGWLGWILPLAVLGFVEVAAQLGWIQARLLPPPSEIVQTLSALLEQGLLVHIS 98 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV I +++ I G+++G H + +P Q L A P+ + PL++ Sbjct: 99 ASVARVFSGYAIGAVLAILFGLFVGLSKHAEAFFEPTFQALRAIPSLAWVPLLLLWFGI- 157 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ G + I +++G E+ + ++ R I+LP P Sbjct: 158 ---DETPKITLIAIGAFFPIYLGLVSGIRNVDRKLIELGEIYGLSAPALARRIVLPAALP 214 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG AW + +E+ + T G+G + + E V+ + ++ Sbjct: 215 SLFTGLRNGLSLAWMFLVAAELIA------ATKGIGYLLTDGRETSRPDVVLAAIFLLAI 268 Query: 565 FVLALNRFL 573 + L Sbjct: 269 LGKLTDGLL 277 >gi|117619242|ref|YP_857864.1| glycine betaine/L-proline ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560649|gb|ABK37597.1| glycine betaine/L-proline ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 383 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 16/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L+IG++ ++ + + + + + + + A T +L+++ +L Sbjct: 127 LMIGLLTLIAWQLVNGRMALGTLFSLVVVGLIGA-WSDAMVTLSLVLTSLFFCVLIGLPV 185 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L A+S RL P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 186 GILLARSERLSRWTRPLLDAMQTTPAFVYLIPIVMLFG---IGNVPGVVVTVIFA----- 237 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + M + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 238 LPPMIRLTMLGIRQVPADLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALSM 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + + D+L Sbjct: 298 VVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAIVLDRL 342 Score = 93.5 bits (231), Expect = 9e-17, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 99/285 (34%), Gaps = 22/285 (7%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + + + V L +IR + ++++L ++ Sbjct: 75 PFQQALVPLDSWVEGGIGWLVDNLRPVFQLIRAPV------ELALGGMTHLLQTVPSTLM 128 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIW 407 G+ IAWQ + + T ++ V +G +T+ V+ + +I +PVGI Sbjct: 129 IGLLTLIAWQLVNGRMALGTLFSLVVVGLIGAWSDAMVTLSLVLTSLFFCVLIGLPVGIL 188 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 + +S +P + PA V+ +V ++ + + ++ Sbjct: 189 LARSERLSRWTRPLLDAMQTTPAFVYLIPIVMLFGIGNVPGVVVTVIF----ALPPMIRL 244 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G P D E A SF + + + LP P + G A + +++ + Sbjct: 245 TMLGIRQVPADLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMI 304 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + + +G L + + L+R Sbjct: 305 AVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAIVLDRL 342 >gi|94991665|ref|YP_599764.1| glycine betaine-binding protein / glycine betaine transport system permease protein [Streptococcus pyogenes MGAS2096] gi|94545173|gb|ABF35220.1| Glycine betaine-binding protein / Glycine betaine transport system permease protein [Streptococcus pyogenes MGAS2096] Length = 339 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 16/235 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +V+ + ++ +P + + + L + T +L A +IS+L Sbjct: 54 LLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQG-LWKQLMNTFTLVLVASLISVLIG 112 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 AK+ + ++ PILD MQ++P +L V +F G V G + IFA+ Sbjct: 113 IPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASVIFALP 169 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + ++ +IP +L E S +F +G QK + + +P + ++ + +M Sbjct: 170 PTVRF-----TNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLA 224 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV MI PG+G + A++ D+ + + L ++ + + D++ Sbjct: 225 LSMVVTGSMI-------GAPGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 Score = 78.4 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L I W + + + + T V+V +I+ + Sbjct: 51 IHPLLFIVLVTAGMFFLAKKKWPLPTFTLLGLLFIYNQGLWKQLMNTFTLVLVASLISVL 110 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GIW+ + + P + PA V+ V+ + + Sbjct: 111 IGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGVFASVIF---- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + P + E + +F TG + + LP + G A + Sbjct: 167 ALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALS 226 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + + + L + + L+R Sbjct: 227 MVVTGSMIG-------APGLGREVLSALQHADIGSGFVSGLALVILAIVLDRM 272 >gi|308186280|ref|YP_003930411.1| Sulfonate transport permease protein ssuC [Pantoea vagans C9-1] gi|308056790|gb|ADO08962.1| Sulfonate transport permease protein ssuC [Pantoea vagans C9-1] Length = 263 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 17/239 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P IV L Q+ + ++ R L I + + S+ +L Sbjct: 39 LPAPEKIVTTFWQLTASGELWQHLAISSWRALIGFSIGGSIGLILGLITGTSKTGERLLD 98 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 + +++++P L + +++F E A IF + ++ + + Y + NI Sbjct: 99 TSVQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRNI 150 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 R L E++RS+ LSGW F + +P ++P ++ + ++ W ++ +E I Sbjct: 151 DRGLVEMARSYGLSGWSLFIQVILPGALPNIMVGVRFALGLMWLTLIVAETISANA---- 206 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTG 277 GIG A + ++ A++ + L D LL R + W ++L+ Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVAALLLERVWLRWHPAYQLKEENA 263 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 74/209 (35%), Gaps = 19/209 (9%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R ++ I I + +G+ G + Q+L P PLV+ Sbjct: 63 AISSWRALIGFSIGGSIGLILGLITGTSKTGERLLDTSVQMLRNVPHLALIPLVILWFGI 122 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ GT + I N G E+A S+ ++GW + +ILPG Sbjct: 123 ----DESAKIFLVALGTLFPIYLNTYHGIRNIDRGLVEMARSYGLSGWSLFIQVILPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S G+G + E VV+ +++ Sbjct: 179 PNIMVGVRFALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILYA 232 Query: 564 CFV-------LALNRFL--WHPLYLYGTR 583 L L R WHP Y Sbjct: 233 LLGKLADVAALLLERVWLRWHPAYQLKEE 261 >gi|293609438|ref|ZP_06691740.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827890|gb|EFF86253.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 279 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + L L + +T R+L +I ++A S+ L P ++SIP L Sbjct: 72 LDLAHSDLFAHIYISTWRVLLGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 ++ +++ K+ + A F +T + ++ N+ + L EV + +R Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDKKLIEVGKVYR 183 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ +Q+ + +P + PG++ + S+S W F++A+E+I GIG ++ Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + ++ A++ + + + D L+ + + W ++R Sbjct: 238 ETSRPDIVIIAIILLALLGKVTDTLM-KLIENWLLRWR 274 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 10/170 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I+ +RV++ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 79 LFAHIYISTWRVLLGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + L+ G + N +A EV + + ++ II Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISII 194 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 LP P +TG + +W I +E+ + T G+G +++ E Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238 >gi|300718020|ref|YP_003742823.1| glycine betaine/L-proline transport system permease [Erwinia billingiae Eb661] gi|299063856|emb|CAX60976.1| glycine betaine/L-proline transport system permease protein [Erwinia billingiae Eb661] Length = 412 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +++ I +V I + A T +L+A++ + Sbjct: 159 LLGMPAPVAIVIFALIAWQMSSLGMGIATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 218 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 219 LIGLPLGIWLARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 275 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SF S Q + + +P +MP ++ + ++ Sbjct: 276 A-----LPPIVRLTILGIKQVPADLIEAGESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 330 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 331 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 381 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 95/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + +I F + V + + P Sbjct: 121 PLDSWV------TTGIDWIVSHFRPVFQGIRVPVDYILSAFQQLLLGMPAPV-------- 166 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + IF ++G+ ++ ++ + + V+ ++ + Sbjct: 167 ---AIVIFALIAWQMSSLGMGIATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCIL 219 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 220 IGLPLGIWLARSDRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 275 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E SF + + + LP P + G A + Sbjct: 276 ALPPIVRLTILGIKQVPADLIEAGESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 335 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 336 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 381 >gi|238794435|ref|ZP_04638045.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia intermedia ATCC 29909] gi|238726230|gb|EEQ17774.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia intermedia ATCC 29909] Length = 347 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL I I+ L Q +T+ + ++ + + A T +L+++ + Sbjct: 92 LLGMPAPIAILVFALIAWQFSTLGMGVATLISLVAIGAIGAWSQAMVTLALVLTSLFFCI 151 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 152 LIGLPMGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 208 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 209 A-----LPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTL 263 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 264 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 314 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + ++ F + V + + P Sbjct: 54 PLDSWV------THGIDWVVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPI-------- 99 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ +V + +T+ V+ + + Sbjct: 100 ---AILVFALIAWQFSTLGMGVATLISLVAIGAIGAWSQAM----VTLALVLTSLFFCIL 152 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 153 IGLPMGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 208 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 209 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 268 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 269 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 314 >gi|325529732|gb|EGD06588.1| sulfonate/nitrate/taurine transport system permease protein [Burkholderia sp. TJI49] Length = 115 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 78/114 (68%), Positives = 96/114 (84%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 + I+LD +LP+YA RTTLRML+AMV SL FT +Y TLAAKSRR GMVL+PILDI+Q Sbjct: 2 LQTQKISLDPSNLPEYALRTTLRMLAAMVASLAFTLIYGTLAAKSRRAGMVLIPILDILQ 61 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 S+P+LGF++FTV +F+ L+PG+V+GAELAAIFAIFTSQ WNMTFS YQSL +P Sbjct: 62 SVPVLGFISFTVTFFLALFPGRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVP 115 >gi|167041194|gb|ABZ05952.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_001L24] Length = 719 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 94/565 (16%), Positives = 186/565 (32%), Gaps = 61/565 (10%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 I I + V + + +T +L A IS L + +S+R+ L PIL++MQ Sbjct: 184 AAITMIYISVFGQWKPSMQTLSFVLVAAPISFLLGLALGIWSYRSKRVEAALNPILNVMQ 243 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 ++P ++ +V F G GA IFA M L + ++ + Sbjct: 244 TMPHYSYIVVIMVMFG---IGDHAGAIATIIFATP-----PMVRLTLLGLRKVSPEVVQA 295 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 + + +Q + + +P + ++ + ++ + V + I G+G Sbjct: 296 GKMSGCNEFQLLFKVLIPTARRDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGWN 348 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 + LA+ + + L A + + + L D++ + W++K + + Sbjct: 349 LLLALNQLRIGLALEAGICISLIAVLLDKMS----LAWAHKQTDYFAHLNFLQRNKYGLF 404 Query: 289 FRKTNFLRFIGYSSWNFF----------SPLSNNVKKLCRTLGVIRFHFPENFLQL---- 334 F + I S +F+ P + + + + + F QL Sbjct: 405 FVGAVIVGLILASFGSFYFKEGFNYLYEVPHNKGISGEPFWNAGVDWIWDTFFFQLKIFN 464 Query: 335 ---------CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGC 384 M + F +V G I +V FT L W Sbjct: 465 TWLIVDVLQPMRAAYLRMPIVATFVLVMGTGYIIGGIRSALVVGGFTLFIALSPWWDRAL 524 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T + +I + II + G + L FP+ V+ V+ Sbjct: 525 VTAYMATFGVIASGIIGVISGSLAAQNTTSTKIALGICDTLQTFPSFVYLIPVMMLFGIT 584 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + + Y I G + P + AS +T + I P FP Sbjct: 585 DTSVLIAVIIYATIPATRY----TIEGLRSVPQALHDAASMSGVTRLQRLFQIDFPLAFP 640 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GSFPEVVLGVLIM 562 + + G A I+ LG YI ++ G ++LG+ + Sbjct: 641 HIMLGINQTVVFALFMVIIGAFIGTED-------LGQYIMKALSDLKGGGKALILGLCV- 692 Query: 563 CCFVLALNRFLWHPLYLYGTRCLRL 587 LA++ + + + +L Sbjct: 693 AFIGLAVDNLIR----TWANKRKKL 713 >gi|325272379|ref|ZP_08138777.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] gi|324102504|gb|EGB99952.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas sp. TJI-51] Length = 236 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ V ++ A++ IPVGI IG+ + P + P + PL+V Sbjct: 42 GASLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGI 101 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ LL+ I G A S + + R++ILP Sbjct: 102 GELSK----VLLIFLAIFAPIAIATATGVRTVDPAKLRAAQSLGASKAQLIRHVILPSAL 157 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 158 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIA 211 Query: 564 CFVLALN---RFLWHPLYLY 580 AL R L L + Sbjct: 212 LIAFALEMSLRALQRKLVPW 231 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + R+ A++ + L +R +L P+++ + IP L +L Sbjct: 35 ASLWQHLGASLGRIGVALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPL 94 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ EL+ + IF + + + + + ++S S Q Sbjct: 95 IVIWCGIG--------ELSKVLLIFLAIFAPIAIATATGVRTVDPAKLRAAQSLGASKAQ 146 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 147 LIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 200 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 201 DVVVLGILLIALIAFALEMSLRALQRKLVPWH 232 >gi|327394926|dbj|BAK12348.1| glycine betaine/L-proline transport system permease protein proW [Pantoea ananatis AJ13355] Length = 383 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 + I + ++ I + + I I + A T +L+A++ ++ Sbjct: 135 PVAIALFALIAWQIASPAMGIATL-ISLIAIGAIGAWSQAMITLALVLTALLFCIIIGLP 193 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S R ++ P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 194 MGIWLARSERAARIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA---- 246 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +P DL E S SF S Q + + +P +MP ++ + ++ Sbjct: 247 -LPPIVRLTILGIKQVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 305 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 306 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRL 351 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 89/279 (31%), Gaps = 30/279 (10%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 + + P+ + + L + L + Q S + I + Sbjct: 103 VVNHFRPVFQSIRVPVDYILSAFQQLLLGMPAPVAIALFALIAWQIASPAMGIATLISLI 162 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 + AW IT+ V+ ++ II +P+GIW+ Sbjct: 163 AIGAIGAWS-------------------QAMITLALVLTALLFCIIIGLPMGIWLARSER 203 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + ++P + PA V+ +V N+ ++ I I+ I G Sbjct: 204 AARIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIVRLTILGIK 259 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 P D E + SF + + + LP P + G A + +++ + + G Sbjct: 260 QVPADLIEASESFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG--- 316 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G + + + L+R Sbjct: 317 ----GLGQMVLRGIGRLDMGLASVGGVGIVILAIILDRL 351 >gi|154151551|ref|YP_001405169.1| binding-protein-dependent transport systems inner membrane component [Candidatus Methanoregula boonei 6A8] gi|154000103|gb|ABS56526.1| binding-protein-dependent transport systems inner membrane component [Methanoregula boonei 6A8] Length = 280 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 87/200 (43%), Gaps = 11/200 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIG-FRPHISSKIQPFAQLLAAFPANVFFP 435 ++ +++ RV+V IA + +P+G +G + + + P Q+L FP Sbjct: 77 GELLTNIAVSLGRVLVGFFIALAVALPLGFLLGGWFKSFETAVNPLLQVLGQANPFTLFP 136 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 + ++ + L+ ++ + QW +LFN ++G ++A S I W+ +R Sbjct: 137 VFITLLGIGELSK----ISIIFWVCQWPVLFNTVSGIKNVDPAIVKMARSMGIGKWQMFR 192 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++LP P TG + A+ I +E+ ++GLG I ++ P++ Sbjct: 193 KVLLPAAMPSVFTGIRMSAVFAFFMLIGAEMIG------ASSGLGYMILQAQATFQMPKM 246 Query: 556 VLGVLIMCCFVLALNRFLWH 575 +G++ + + N L Sbjct: 247 WVGIVTVAFLGILFNWILLQ 266 Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 16/252 (6%) Query: 12 SRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 SR+ + F+L+ + L VP I+ + L + + Sbjct: 29 SRKFIHVTGAIFVFLLIWQLAPYFGLINPIIIPVPTTILQKMIQLTLSGELLTNIAVSLG 88 Query: 71 RMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R+L I+L L + + P+L ++ + Sbjct: 89 RVLVGFFIALAVALPLGFLLGGWFKSFETAVNPLLQVLGQANPFTLFPVFITLLGIG--- 145 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 EL+ I IF W + F+ + N+ + +++RS + WQ F + +P +M Sbjct: 146 -----ELSKISIIFWVCQWPVLFNTVSGIKNVDPAIVKMARSMGIGKWQMFRKVLLPAAM 200 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P + + MS +F ++ +EMI G+G I A + + ++T+ Sbjct: 201 PSVFTGIRMSAVFAFFMLIGAEMIGASS------GLGYMILQAQATFQMPKMWVGIVTVA 254 Query: 250 GVIFLYDQLLFR 261 + L++ +L + Sbjct: 255 FLGILFNWILLQ 266 >gi|269966457|ref|ZP_06180541.1| glycine betaine/L-proline transport system permease [Vibrio alginolyticus 40B] gi|269828914|gb|EEZ83164.1| glycine betaine/L-proline transport system permease [Vibrio alginolyticus 40B] Length = 361 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T +L+A+ LL A+S+ + PILD MQ+ P +L V+ F Sbjct: 139 AMTTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 198 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA + + + +P +L E SF + Q + + Sbjct: 199 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 250 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ VV + MI VG G+G + I D+ Sbjct: 251 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 303 Query: 245 MLTMLGVIFLYDQL 258 L ++ + L D++ Sbjct: 304 GLGIVILAILLDRI 317 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 12/280 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + S L+ V+ IR + + + + Sbjct: 50 PFQDAVLPLDSWVESGLNWLVEHGRPVFQAIRVPIDFILTSFETALVSTPAPIMVLILFL 109 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 +V + ++ T+ V+ + +I +P+GIW+ Sbjct: 110 LAWQFSNVKLGFSTLV-SLVFIGLIGAWSQAMTTLALVLTAVFFCLLIGLPMGIWLARSQ 168 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + ++P + PA V+ +V N+ ++ I ++ I G Sbjct: 169 TAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILGI 224 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P + E SF + I LP P + G + + +++ + + G Sbjct: 225 QQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-- 282 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 283 -----GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317 >gi|197124196|ref|YP_002136147.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Anaeromyxobacter sp. K] gi|196174045|gb|ACG75018.1| binding-protein-dependent transport systems inner membrane component [Anaeromyxobacter sp. K] Length = 269 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + + +++RVV + + + +P+G+ +G RP + + P Q+L P Sbjct: 61 VAWAFSGELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPP 120 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + + L+ G + +L N IAG + A + + Sbjct: 121 IAYIPLAILWFGLG----DPPAFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASE 176 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W + I++P PY + G G A+ IV+E+ + GLG I E+ E Sbjct: 177 WTLFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIA------VNAGLGYRILEAREYF 230 Query: 551 SFPEVVLGVLIMCCFVLALN 570 +V+ G++ + L ++ Sbjct: 231 WSDKVIAGMISIGIAGLGID 250 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 LP A + R++ + L + ++ P++ I++ IP + ++ Sbjct: 67 GELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPPIAYIPL 126 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P A F I + + + + N+ +R+ S W Sbjct: 127 AILWFGLGDPP--------AFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASEWT 178 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW + VP +MP ++ + + + + V+ +EMI V G+G I A + Sbjct: 179 LFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIAVNA------GLGYRILEAREYFWS 232 Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261 ++ M+++ D + R Sbjct: 233 DKVIAGMISIGIAGLGIDLGMSR 255 >gi|270261219|ref|ZP_06189492.1| transporter [Serratia odorifera 4Rx13] gi|270044703|gb|EFA17794.1| transporter [Serratia odorifera 4Rx13] Length = 264 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 102/259 (39%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V++ I P +V L Q+ + ++ R L I Sbjct: 19 VTLVVIWQISVEAGWLSNRILPAPSAVVTAFWTLTKSGELWQHLTISSWRALIGFSIGGS 78 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 V + SR +L + +++++P L + +++F E A IF Sbjct: 79 IGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID--------ESAKIFL 130 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + ++ + + Y + NI L E++RS+ LSG++ F + +P ++P ++ + ++ Sbjct: 131 VALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGVRFALG 190 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W ++ +E I GIG A + ++ A++ + L D QL Sbjct: 191 FMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADVSAQL 244 Query: 259 LFRPMIVWSNKFRLERTTG 277 L R + W ++L+ Sbjct: 245 LERVWLRWHPAYQLKPGEA 263 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 83/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRV 390 R++ V+ +++ W S + T + I+ +R Sbjct: 10 HRLAPWALPVTLVVIWQISVEAGWLSNRILPAPSAVVTAFWTLTKSGELWQHLTISSWRA 69 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 ++ I I + +G G + Q++ P PLV+ Sbjct: 70 LIGFSIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI----DES 125 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G + E+A S+ ++G+R + ++LPG P + G Sbjct: 126 AKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLFTQVVLPGALPSIMVGV 185 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 186 RFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239 >gi|220918976|ref|YP_002494280.1| binding-protein-dependent transport systems inner membrane component [Anaeromyxobacter dehalogenans 2CP-1] gi|219956830|gb|ACL67214.1| binding-protein-dependent transport systems inner membrane component [Anaeromyxobacter dehalogenans 2CP-1] Length = 269 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + + +++RVV + + + +P+G+ +G RP + + P Q+L P Sbjct: 61 LAWAFSGELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPP 120 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + + L+ G + +L N IAG + A + + Sbjct: 121 IAYIPLAILWFGLG----DPPAFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASE 176 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W + I++P PY + G G A+ IV+E+ + GLG I E+ E Sbjct: 177 WTLFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIA------VNAGLGYRILEAREYF 230 Query: 551 SFPEVVLGVLIMCCFVLALN 570 +V+ G++ + L ++ Sbjct: 231 WSDKVIAGMISIGIAGLGID 250 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 LP A + R++ + L + ++ P++ I++ IP + ++ Sbjct: 67 GELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPPIAYIPL 126 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P A F I + + + + N+ +R+ S W Sbjct: 127 AILWFGLGDPP--------AFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASEWT 178 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW + VP +MP ++ + + + + V+ +EMI V G+G I A + Sbjct: 179 LFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIAVNA------GLGYRILEAREYFWS 232 Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261 ++ M+++ D + R Sbjct: 233 DKVIAGMISIGIAGLGIDLGMSR 255 >gi|188533081|ref|YP_001906878.1| glycine betaine transporter membrane protein [Erwinia tasmaniensis Et1/99] gi|188028123|emb|CAO95980.1| Glycine betaine/L-proline transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 387 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q ++ + +V + + A T +L+A++ + Sbjct: 134 LLGMPAPVAIIVFALIAWQLSSFSMGVATLVSLVAIGAIGAWSQAMVTLALVLTALLFCI 193 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S+R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 194 IIGLPLGIWLARSQRAAKIIRPMLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 250 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 251 A-----LPPIVRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTL 305 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 306 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + T + P Sbjct: 96 PLDSWV------TTAIDWVVTHFRPLFQGVRLPVDYILSTFQQLLLGMPAPV-------- 141 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F + + ++ +V + + V+ ++ I Sbjct: 142 ---AIIVFALIAWQLSSFSMGVATLVSLVAIGAIGAWSQAMVTLAL----VLTALLFCII 194 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 195 IGLPLGIWLARSQRAAKIIRPMLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 250 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + + LP P + G A + Sbjct: 251 ALPPIVRLTILGIKQVPADLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 310 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 311 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 356 >gi|282855801|ref|ZP_06265106.1| sulfate transport system permease protein [Pyramidobacter piscolens W5455] gi|282586368|gb|EFB91631.1| sulfate transport system permease protein [Pyramidobacter piscolens W5455] Length = 280 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 21/201 (10%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + + I+ RV + ++ +P+GI +G ++ + ++L P + Sbjct: 56 QMGSMAVNVWISCLRVFGGYMAGLMLALPLGILMGHYKLVNRLLGSLVEILRPMPPLSWI 115 Query: 435 PLVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 PL+++ L + + +++ G + IL N + G S P Sbjct: 116 PLLLAWFGVASLATLFGVEEGEWYILLNSIKFTMLIVIFIGAFFPILLNTVHGVSGVPAT 175 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 + A + + ++LPG P VTG GGAW + +E+ +G Sbjct: 176 LIDSARVLGASERDIFFKVLLPGAAPSIVTGMRLGLGGAWMCLVAAEMMPG-----SISG 230 Query: 539 LGAYIAESTEKGSFPEVVLGV 559 +G I + V+ G+ Sbjct: 231 IGYLITHAYTVARTDIVMAGM 251 Score = 116 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 17/201 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + LR+ + L+ L + + +L +++I++ +P L ++ + +F Sbjct: 67 SCLRVFGGYMAGLMLALPLGILMGHYKLVNRLLGSLVEILRPMPPLSWIPLLLAWFGVAS 126 Query: 128 PGKVIGAE------------LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + G E + IF + + + + +P L + +R S Sbjct: 127 LATLFGVEEGEWYILLNSIKFTMLIVIFIGAFFPILLNTVHGVSGVPATLIDSARVLGAS 186 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 F+ + +P + P +V M + + G W +VA+EM+ + GIG I A Sbjct: 187 ERDIFFKVLLPGAAPSIVTGMRLGLGGAWMCLVAAEMMPG-----SISGIGYLITHAYTV 241 Query: 236 QDLLAILYAMLTMLGVIFLYD 256 ++ M+++ + L D Sbjct: 242 ARTDIVMAGMISIGIIGLLID 262 >gi|84489800|ref|YP_448032.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Methanosphaera stadtmanae DSM 3091] gi|84373119|gb|ABC57389.1| predicted ABC-type nitrate/sulfonate/bicarbonate transport system, permease protein [Methanosphaera stadtmanae DSM 3091] Length = 251 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 76/188 (40%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+++V++ +IIA+I+ I +G+ G+ + +L P + P + Sbjct: 65 TLYKVILGLIIAAIVGISLGLMAGWSKYFERLTSVIVSVLRPIPPIAWIPFSILWFGIG- 123 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L ++ G + I + G E A +F ++ + +ILP PY Sbjct: 124 ---SLPAIFIIFMGCVFPIFVYTVDGVHRTKKVLIESALTFGVSNEQMITEVILPSTIPY 180 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 V+G A G A +I E+ ++G+G I ST V+G+L++ Sbjct: 181 IVSGLKVAIGIALMCTISGEMIG------SSSGIGYMILTSTNLFDTGSTVVGMLLIGFI 234 Query: 566 VLALNRFL 573 + + Sbjct: 235 GIIFDYIF 242 Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 89/219 (40%), Gaps = 14/219 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P ++ + L L T +++ ++I+ + +A S+ + Sbjct: 40 PGPVEVFNSFINLLTSGRLVTDILDTLYKVILGLIIAAIVGISLGLMAGWSKYFERLTSV 99 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 I+ +++ IP + ++ F++++F L AIF IF V+ + + Sbjct: 100 IVSVLRPIPPIAWIPFSILWFGIG--------SLPAIFIIFMGCVFPIFVYTVDGVHRTK 151 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 + L E + +F +S Q + +P ++P +V + +++ ++ EMI Sbjct: 152 KVLIESALTFGVSNEQMITEVILPSTIPYIVSGLKVAIGIALMCTISGEMIGSSS----- 206 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GIG I + D + + ML + + ++D + + Sbjct: 207 -GIGYMILTSTNLFDTGSTVVGMLLIGFIGIIFDYIFTK 244 >gi|146276813|ref|YP_001166972.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145555054|gb|ABP69667.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 412 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 15/202 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRV+ + +++ IP+G + P P + + P PLV+ Sbjct: 219 GASLFRVLAGFLAGALVGIPLGYAMALSPWARGWFDPIVEFMRPVPPLALIPLVIIWFGI 278 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+ + W + +G ++ A S + + ++I+P Sbjct: 279 GEVGK----VILLFLASLWIMAIAARSGVTSVRLAKVHAAYSLGASRPQLLWHVIVPHSL 334 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TGA A G W + +E+ + G G I +++ V++GV+++ Sbjct: 335 PDLFTGARVAMGVCWGTVVAAELVAAEK------GAGMMIIAASKFQQTDVVLMGVILIG 388 Query: 564 CFVLALNRFLWHPLYLYGTRCL 585 ++ + L Sbjct: 389 LIGYGIDILM-----RLAESRL 405 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 14/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L + + R+L+ + L A S PI++ M+ +P L + Sbjct: 213 ALASHLGASLFRVLAGFLAGALVGIPLGYAMALSPWARGWFDPIVEFMRPVPPLALIPLV 272 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GKVI +F + +W M + + ++ + S S Q Sbjct: 273 IIWFGIGEVGKVI--------LLFLASLWIMAIAARSGVTSVRLAKVHAAYSLGASRPQL 324 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 W++ VP S+P L ++M W VVA+E++ G G I A K Q Sbjct: 325 LWHVIVPHSLPDLFTGARVAMGVCWGTVVAAELVA------AEKGAGMMIIAASKFQQTD 378 Query: 240 AILYAMLTMLGVIFLYDQLL 259 +L ++ + + + D L+ Sbjct: 379 VVLMGVILIGLIGYGIDILM 398 >gi|188583085|ref|YP_001926530.1| ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179346583|gb|ACB81995.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium populi BJ001] Length = 285 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 89/263 (33%), Gaps = 16/263 (6%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY 378 + + + L WF + A+ + Sbjct: 22 RRAGTGARLGASAVNRLAPLLGLAGLLALWFAGGLVLESVPAYAAFAGFAPGPALASFAE 81 Query: 379 VIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 +I G ++ R+ + A ++ P+G+ +G P +QP QLL Sbjct: 82 LIASGEAWRAAAPSLARIGQGLAAAFLLGAPLGLLVGSAPLAERILQPPFQLLRMISPLA 141 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + P+ V + + L+ W ILF+ AG + +A + Sbjct: 142 WMPVAVLAFPSWDG----AIVFLIAAAAIWPILFSTAAGVKRVDPVWLAMARNLGAGRLA 197 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 R +I+P + +TG A G AW + +E T+GLG I ++ + S+ Sbjct: 198 ALRAVIVPAVLQDILTGLRLALGVAWIVLVPAEYLG------VTSGLGYAINDARDTLSY 251 Query: 553 PEVVLGVLIMCCFVLALNRFLWH 575 + VL++ AL+ L Sbjct: 252 DRLAALVLLIGLIGYALDSVLGR 274 Score = 97.3 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 82/238 (34%), Gaps = 14/238 (5%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F + + ++ + P + + + A+ + R+ + + L Sbjct: 51 WFAGGLVLESVPAYAAFAGFAPGPALASFAELIASGEAWRAAAPSLARIGQGLAAAFLLG 110 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L + +L P +++ I L ++ V+ F + A +F I Sbjct: 111 APLGLLVGSAPLAERILQPPFQLLRMISPLAWMPVAVLAF--------PSWDGAIVFLIA 162 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + +W + FS + + ++R+ + VP + ++ + +++ Sbjct: 163 AAAIWPILFSTAAGVKRVDPVWLAMARNLGAGRLAALRAVIVPAVLQDILTGLRLALGVA 222 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 W +V +E + V G+G I A + +L + + + D +L R Sbjct: 223 WIVLVPAEYLGV------TSGLGYAINDARDTLSYDRLAALVLLIGLIGYALDSVLGR 274 >gi|126739819|ref|ZP_01755510.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. SK209-2-6] gi|126719051|gb|EBA15762.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. SK209-2-6] Length = 421 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVVV ++ SI+ IP+G +G P + + P PLV+ + Sbjct: 230 SLIRVVVGFVLGSIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ W + AG S A S + + R++I+P P Sbjct: 290 TGK----IFLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKAQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 8/156 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 +L ++ + +R++ V+ + S PI++ M+ +P L + Sbjct: 222 TLWEHLGWSLIRVVVGFVLGSIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV 281 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK IF +F + +W MT + + + + S S Q Sbjct: 282 IIWFGIWETGK--------IFLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKAQI 333 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ VP S+P + ++M W VVA+E++ Sbjct: 334 MRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369 >gi|86160168|ref|YP_466953.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85776679|gb|ABC83516.1| ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 269 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 98/256 (38%), Gaps = 11/256 (4%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 +L R+L + F + + VS ++ V+ N + Sbjct: 6 RLARSLA-VPVIFLAAWEGVSRAGWVSPIVLPAPSQVLLRWIAYARPFEPYAGGNWLAWA 64 Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + +++RVV + + + +P+G+ +G RP + + P Q+L P + Sbjct: 65 FSGELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPPIAYI 124 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + L+ G + +L N IAG + A + + W + Sbjct: 125 PLAILWFGLG----DPPAFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASEWTLF 180 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 I++P PY + G G A+ IV+E+ + GLG I E+ E + Sbjct: 181 WRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIA------VNAGLGYRILEAREYFWSDK 234 Query: 555 VVLGVLIMCCFVLALN 570 V+ G++ + L ++ Sbjct: 235 VIAGMISIGIAGLGID 250 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 LP A + R++ + L + ++ P++ I++ IP + ++ Sbjct: 67 GELPHDALTSLYRVVGGFAVGAGLALPLGLLMGSRPVVYELMNPLVQILRPIPPIAYIPL 126 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P A F I + + + + N+ +R+ S W Sbjct: 127 AILWFGLGDPP--------AFFLISLGAFFPVLMNTIAGVRNVDAIYVRAARNLGASEWT 178 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW + VP +MP ++ + + + + V+ +EMI V G+G I A + Sbjct: 179 LFWRIMVPAAMPYILAGVRIGIGVAFIVVIVAEMIAVNA------GLGYRILEAREYFWS 232 Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261 ++ M+++ D + R Sbjct: 233 DKVIAGMISIGIAGLGIDLGMSR 255 >gi|328957271|ref|YP_004374657.1| glycine betaine transport system permease protein OpuAB [Carnobacterium sp. 17-4] gi|328673595|gb|AEB29641.1| glycine betaine transport system permease protein OpuAB [Carnobacterium sp. 17-4] Length = 281 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + T +L A ++S++ + L AKS+ ++ P+LD MQ++P +L Sbjct: 90 QGLWEDLMNTLTLVLVASLLSVIIGVPFGILMAKSKIANAIITPVLDFMQTMPAFVYLIP 149 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFAI + + + + +L E + SF +G Q Sbjct: 150 AVAFFG---IGMVPGVFASLIFAIPPTVRF-----TNLGIRQVSHELVEAAESFGSTGAQ 201 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + + +P + ++ + ++ VV + MI PG+G + +++ + Sbjct: 202 KLFKVELPLAKSTIMAGINQTVMLALSMVVIASMI-------GAPGLGREVLSSLQRAQI 254 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + L ++ + + D+L Sbjct: 255 GTGFVSGLGLVVLAIIIDRL 274 Score = 73.0 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 11/187 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V+V +++ II +P GI + ++ I P + PA V+ V+ Sbjct: 99 TLTLVLVASLLSVIIGVPFGILMAKSKIANAIITPVLDFMQTMPAFVYLIPAVAFFGIGM 158 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + I T + G ++ E A SF TG + + LP Sbjct: 159 VPGVFASLIFAIPPTVRF----TNLGIRQVSHELVEAAESFGSTGAQKLFKVELPLAKST 214 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G A + +++ + GLG + S ++ + L + Sbjct: 215 IMAGINQTVMLALSMVVIASMIG-------APGLGREVLSSLQRAQIGTGFVSGLGLVVL 267 Query: 566 VLALNRF 572 + ++R Sbjct: 268 AIIIDRL 274 >gi|283853315|ref|ZP_06370564.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. FW1012B] gi|283571296|gb|EFC19307.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. FW1012B] Length = 251 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 8/186 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV+V +A ++ PVG+ +G P + P + P + PL + + Sbjct: 60 MSLTRVLVGTGLAVVLGAPVGLALGASPRLRGGFMPLVDFIRPIPPLAWVPLAILWLGLG 119 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + L+ G + ++ +G A + E WR ++LPG P Sbjct: 120 LAS----AAALIFLGAFFPVVLATCSGVRAVDRSYVEAVRILGGGRLAVWRKVLLPGCLP 175 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG G W + +E A + GLG I + + V+ G++ + Sbjct: 176 AALTGVRVGLGIGWMTLVAAEFAGVRGGY----GLGYMILSARDLQRIDMVMAGMVAIGL 231 Query: 565 FVLALN 570 LA+ Sbjct: 232 VGLAME 237 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 77/203 (37%), Gaps = 12/203 (5%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +LP +A + R+L ++++ S RL +P++D ++ IP L ++ Sbjct: 52 RTLPMHAWMSLTRVLVGTGLAVVLGAPVGLALGASPRLRGGFMPLVDFIRPIPPLAWVPL 111 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++ +A IF + + + + + R E R Sbjct: 112 AILWLGLGL--------ASAAALIFLGAFFPVVLATCSGVRAVDRSYVEAVRILGGGRLA 163 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + +P +P + + + + GW +VA+E V G+G I A Q + Sbjct: 164 VWRKVLLPGCLPAALTGVRVGLGIGWMTLVAAEFAGVRGGY----GLGYMILSARDLQRI 219 Query: 239 LAILYAMLTMLGVIFLYDQLLFR 261 ++ M+ + V + L R Sbjct: 220 DMVMAGMVAIGLVGLAMELGLKR 242 >gi|312961036|ref|ZP_07775541.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311284694|gb|EFQ63270.1| glycine betaine/L-proline ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 321 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 17/279 (6%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVI 78 F LLA I II L G Q I+ V +TL V + A T +L+++ Sbjct: 52 FGLLAIPPSIFIIIATLLGWQVGGRRIGILCFVTLTLLGVIGVWSDAMVTLALVLTSLFF 111 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + L A+S RL M L P+LD MQ++P +L V+ F G V G + Sbjct: 112 CAVIGIPLGVLCARSDRLEMFLRPVLDAMQTLPAFVYLVPVVMLFG---IGNVPGVLVTI 168 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IF++ + + +P D E +R+F + +Q + +P + P ++ + Sbjct: 169 IFSVA-----PLVRLTNLGIRQVPEDKVEAARAFGCTPYQMLRRVQLPLAAPTIMAGLNQ 223 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 ++ VV + MI VG G+G + I D+ L ++ + D+L Sbjct: 224 ALMLSLSMVVIASMISVG-------GLGMMVLRGIGRLDMGLATVGGLGLVLLAIFLDRL 276 Query: 259 LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRF 297 + M SN+ V L RK + Sbjct: 277 -TQAMGERSNRATKGEHWYQTGPAGVVYRLKRKNTIPKI 314 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 16/238 (6%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIG-----YIVNHFTYQDVLYVIWLGCITMFRVVVLI 394 + + L + +A + WQ G T V+ V +T+ V+ + Sbjct: 50 IQFGLLAIPPSIFIIIATLLGWQVGGRRIGILCFVTLTLLGVIGVWSDAMVTLALVLTSL 109 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 ++I IP+G+ + ++P + PA V+ VV N+ L Sbjct: 110 FFCAVIGIPLGVLCARSDRLEMFLRPVLDAMQTLPAFVYLVPVVMLFGIG----NVPGVL 165 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + I + ++ G P D E A +F T ++ R + LP P + G A Sbjct: 166 VTIIFSVAPLVRLTNLGIRQVPEDKVEAARAFGCTPYQMLRRVQLPLAAPTIMAGLNQAL 225 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + S G GLG + + +G L + + L+R Sbjct: 226 MLSLSMVVIASMISVG-------GLGMMVLRGIGRLDMGLATVGGLGLVLLAIFLDRL 276 >gi|330505559|ref|YP_004382428.1| ABC transporter permease [Pseudomonas mendocina NK-01] gi|328919845|gb|AEB60676.1| ABC transporter, permease protein [Pseudomonas mendocina NK-01] Length = 274 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 14/237 (5%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + + + + + + L L + ++LR+L+ I Sbjct: 33 AILLASLESVVRIGWIPAYLMPAPSELAVTLWELAEGPLWTHILASSLRVLAGFAIGASL 92 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V +L SRRL L P ++++P L ++ +++ KV + + F + Sbjct: 93 ALVLGSLVGLSRRLEAYLDPTFQALRAVPGLAWVPLLLIWLGIDESSKVTLIAIGSFFPV 152 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + ++ + N+ R L EV LS + VP + P L + +S Sbjct: 153 Y--------LNLVAGIRNVDRKLVEVGELCNLSRLATIRRIFVPAAQPYLFTGLRAGLSM 204 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W VVA+E++ GIG + + +L A+ T+ + L D LL Sbjct: 205 AWLCVVAAELLA------ATEGIGYLLTDGREVSRPDRVLVAIATLAVMGKLSDSLL 255 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 87/260 (33%), Gaps = 17/260 (6%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTY 373 + R+ L + ++ I W A ++ + + Sbjct: 13 RLAWRSWLPGLSSLQGWLLPAILLASLESVVRIGWIPAYLMPAPSELAVTLWELAEGPLW 72 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +L + RV+ I + + + +G +G + + + P Q L A P + Sbjct: 73 THIL-------ASSLRVLAGFAIGASLALVLGSLVGLSRRLEAYLDPTFQALRAVPGLAW 125 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL++ + L+ G+ + + N++AG EV +++ Sbjct: 126 VPLLLIWLGI----DESSKVTLIAIGSFFPVYLNLVAGIRNVDRKLVEVGELCNLSRLAT 181 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R I +P PY TG AW + +E+ + T G+G + + E Sbjct: 182 IRRIFVPAAQPYLFTGLRAGLSMAWLCVVAAELLA------ATEGIGYLLTDGREVSRPD 235 Query: 554 EVVLGVLIMCCFVLALNRFL 573 V++ + + + L Sbjct: 236 RVLVAIATLAVMGKLSDSLL 255 >gi|146310501|ref|YP_001175575.1| taurine transporter subunit [Enterobacter sp. 638] gi|145317377|gb|ABP59524.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] Length = 275 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R++V ++ A ++ IPVGI +G P + + P +L P + PL+V Sbjct: 81 AASLGRILVALLAAVVLGIPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + + +AG + A S + + ++ILPG Sbjct: 141 GETSK----ILLIYLAIFAPVAMSAVAGVKSAQQVRLRAAQSLGASRAQVLWFVILPGAL 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G++++ Sbjct: 197 PEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIMVIA 250 Query: 564 CFVLALN---RFLWHPLYLY 580 L R L L + Sbjct: 251 VIAFGLELGLRALQRRLTPW 270 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 92/218 (42%), Gaps = 17/218 (7%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 P +L Q+ + + R+L A++ +++ S + +L P++++ + +P Sbjct: 68 PQGFMDATLWQHLAASLGRILVALLAAVVLGIPVGIAMGLSPTVRGILDPLIELYRPVPP 127 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 L +L V++F K++ LA + S V + + + ++S Sbjct: 128 LAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSAV--------AGVKSAQQVRLRAAQSL 179 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 S Q W++ +P ++P ++ + + + GW +VA+E+I G+G + A Sbjct: 180 GASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSA 233 Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 + +L ++ + + F + + L R + W Sbjct: 234 GEFLATDVVLAGIMVIAVIAFGLELGLRALQRRLTPWH 271 >gi|241205023|ref|YP_002976119.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858913|gb|ACS56580.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 278 Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 98/270 (36%), Gaps = 18/270 (6%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQY 64 + P +A V + + + P D+ T LP Sbjct: 22 LRLPLPGLDKLTPYLVPVAIVALWQLASSAGWISSRIMPSPADVGLAFWSTTVSGQLPND 81 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R + +++ F+ SR + L ++++IP L + +++F Sbjct: 82 VLVSAGRAFAGLLVGGSIGFLLGIANGVSRISEQLTDTTLQMLRTIPHLAMIPLVILWFG 141 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E + +F ++ + + Y + N+ RDL E+ + + + W F + Sbjct: 142 IG--------EESKLFLTSLGVLFPVYLNTYHGVRNVDRDLIEMGKVYGMGNWTLFRKVI 193 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 P ++P + + ++ W ++ SE I GIG A + ++ A Sbjct: 194 FPGALPSIFVGLRYALGIMWLTLIVSESIAASS------GIGHMANNAREFMMTDVVVLA 247 Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 ++ + L D + L R ++VW+ ++ Sbjct: 248 LVIYAVLGKLADVIARALERRLLVWNPVYQ 277 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 88/283 (31%), Gaps = 32/283 (11%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R++ + L L +++ L + +A W S + + D Sbjct: 8 FVRSVASEKAGKAGLRLPLPGLDKLTPYLVPVAIVALWQLASSAGWISSRIM---PSPAD 64 Query: 376 VLYVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 V W ++ R +++ I +GI G Q+L Sbjct: 65 VGLAFWSTTVSGQLPNDVLVSAGRAFAGLLVGGSIGFLLGIANGVSRISEQLTDTTLQML 124 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P PLV+ + L G + + N G D E+ Sbjct: 125 RTIPHLAMIPLVILWFGIGEESK----LFLTSLGVLFPVYLNTYHGVRNVDRDLIEMGKV 180 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + + W +R +I PG P G A G W IVSE + ++G+G Sbjct: 181 YGMGNWTLFRKVIFPGALPSIFVGLRYALGIMWLTLIVSESIA------ASSGIGHMANN 234 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNR---------FLWHPLYL 579 + E VVL ++I + +W+P+Y Sbjct: 235 AREFMMTDVVVLALVIYAVLGKLADVIARALERRLLVWNPVYQ 277 >gi|304405669|ref|ZP_07387328.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304345708|gb|EFM11543.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 277 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 10/202 (4%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 + + ++ R + +A ++ IP+G+ IG+ P ++ + P +L A Sbjct: 70 GLLEGGDIAVHFQASIVRSLSGFSLAILLAIPLGLLIGWYPKVAELLTPLLELFRNTAAL 129 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 P+ V + + L+ + W IL N I G + A S + Sbjct: 130 ALLPVFVLILGIGETSK----VALVFYSCSWPILLNTINGVKNVDPLLIKSAKSMGLGSL 185 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 R ++ +ILP P TG A + + +E+ GLG I + Sbjct: 186 RLFQKVILPASVPTIFTGIRLAGAYSILVLVAAEMVG------AKAGLGYLINYTQFNFQ 239 Query: 552 FPEVVLGVLIMCCFVLALNRFL 573 P++ G++ + L N+ L Sbjct: 240 IPQMYAGIITISILGLLFNQLL 261 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 86/214 (40%), Gaps = 17/214 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L+ + + + +R LS +++L L ++ +L P+L++ ++ L Sbjct: 72 LEGGDIAVHFQASIVRSLSGFSLAILLAIPLGLLIGWYPKVAELLTPLLELFRNTAALAL 131 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L V+ E + + +F S W + + + N+ L + ++S L Sbjct: 132 LPVFVLILGIG--------ETSKVALVFYSCSWPILLNTINGVKNVDPLLIKSAKSMGLG 183 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + F + +P S+P + + ++ + +VA+EM+ G+G I Sbjct: 184 SLRLFQKVILPASVPTIFTGIRLAGAYSILVLVAAEMVGAKA------GLGYLINYTQFN 237 Query: 236 QDLLAILYAMLTMLGVIFLYDQL---LFRPMIVW 266 + + ++T+ + L++QL L R W Sbjct: 238 FQIPQMYAGIITISILGLLFNQLLITLERRFSSW 271 >gi|152975750|ref|YP_001375267.1| binding-protein-dependent transport systems inner membrane component [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024502|gb|ABS22272.1| binding-protein-dependent transport systems inner membrane component [Bacillus cytotoxicus NVH 391-98] Length = 283 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 84/231 (36%), Gaps = 10/231 (4%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 +L + + V+ + + + + I++FR V I + + Sbjct: 43 LLIWQFAGFLELVSKTVLPTPWDIFLAFQSLVQTGELFNHLSISVFRAAVGFFIGGSLGV 102 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 +G +GF + P Q+L P PL V + + LL+ G + Sbjct: 103 VLGTIVGFSTRSEQYLDPSIQMLRTVPHLAVAPLFVLWFGFGETSK----VLLIADGAFF 158 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + N G + +VA + + +I+P P + GA + G AW + + Sbjct: 159 PLYVNTFLGIRGVDSKLFDVARVLEFSKRKLITKLIIPAALPNLLLGARLSLGVAWVSLV 218 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 V+E+ T G+G I ++ + + V +G++I + + Sbjct: 219 VAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLV 263 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 90/255 (35%), Gaps = 18/255 (7%) Query: 24 AFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 +L+ L L P DI + L + S + R I Sbjct: 41 IVLLIWQFAGFLELVSKTVLPTPWDIFLAFQSLVQTGELFNHLSISVFRAAVGFFIGGSL 100 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 V T+ S R L P + +++++P L V++F KV+ A F Sbjct: 101 GVVLGTIVGFSTRSEQYLDPSIQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF-- 158 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + + + L +V+R S + L +P ++P L+ +S+ Sbjct: 159 ------PLYVNTFLGIRGVDSKLFDVARVLEFSKRKLITKLIIPAALPNLLLGARLSLGV 212 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259 W +V +E++ GIG I A + + + ++ V D +LL Sbjct: 213 AWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLL 266 Query: 260 FRPMIVWSNKFRLER 274 + W + ++ E Sbjct: 267 EVRCLKWRDNYKGES 281 >gi|332637580|ref|ZP_08416443.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Weissella cibaria KACC 11862] Length = 262 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 82/231 (35%), Gaps = 17/231 (7%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMFRVVVLII 395 L +V VA+ W Y+ + + +W I+++R + ++ Sbjct: 18 WLIPIALIIVWQVAVDAKWIDATYVPSPLAVLEQGVTLWQAGTLQQNMGISLYRATMGLL 77 Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I + +G+ G + Q++ P PL++ L Sbjct: 78 IGGAVGFVLGVANGLSRISHALFNSTIQMVRNIPHLALIPLIIIWFGIG----EPAKVTL 133 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + I N + G + E+ S+ +T W+ + +I PG P + G A G Sbjct: 134 VAIGVMFPIYINTLHGIQSIDPKLIEMGQSYRLTKWQMFTKVIFPGAMPTILMGLRYALG 193 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 W IVSE S ++G+G + + P + L ++I Sbjct: 194 VMWTTLIVSETIS------ASSGIGYMETNAQQFLDMPTIFLAIIIYAILG 238 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 90/237 (37%), Gaps = 15/237 (6%) Query: 23 LAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +A ++V + P +++ +L Q + R ++I Sbjct: 22 IALIIVWQVAVDAKWIDATYVPSPLAVLEQGVTLWQAGTLQQNMGISLYRATMGLLIGGA 81 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 FV SR + + ++++IP L + +++F P A + Sbjct: 82 VGFVLGVANGLSRISHALFNSTIQMVRNIPHLALIPLIIIWFGIGEP--------AKVTL 133 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + ++ + + + +I L E+ +S+RL+ WQ F + P +MP ++ + ++ Sbjct: 134 VAIGVMFPIYINTLHGIQSIDPKLIEMGQSYRLTKWQMFTKVIFPGAMPTILMGLRYALG 193 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 W ++ SE I GIG A + D+ I A++ + + D + Sbjct: 194 VMWTTLIVSETISASS------GIGYMETNAQQFLDMPTIFLAIIIYAILGKVSDWI 244 >gi|184158672|ref|YP_001847011.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Acinetobacter baumannii ACICU] gi|332874367|ref|ZP_08442278.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6014059] gi|183210266|gb|ACC57664.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii ACICU] gi|322507517|gb|ADX02971.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii 1656-2] gi|323518587|gb|ADX92968.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Acinetobacter baumannii TCDC-AB0715] gi|332737446|gb|EGJ68362.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6014059] Length = 279 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + L L + +T R+L +I ++A S+ L P ++SIP L Sbjct: 72 LDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 ++ +++ K+ + A F +T + ++ N+ + L EV + +R Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDKKLIEVGKVYR 183 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ +Q+ + +P + PG++ + S+S W F++A+E+I GIG ++ Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + ++ A++ + + + D L+ + + W ++R Sbjct: 238 ETSRPDIVIIAIILLALLGKITDTLM-KLIENWLLRWR 274 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I+ +RV+ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 79 LFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + L+ G + N +A EV + + ++ II Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISII 194 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 LP P +TG + +W I +E+ + T G+G +++ E Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238 >gi|153953414|ref|YP_001394179.1| ProW [Clostridium kluyveri DSM 555] gi|219854039|ref|YP_002471161.1| hypothetical protein CKR_0696 [Clostridium kluyveri NBRC 12016] gi|146346295|gb|EDK32831.1| ProW [Clostridium kluyveri DSM 555] gi|219567763|dbj|BAH05747.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 274 Score = 123 bits (310), Expect = 7e-26, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 104/236 (44%), Gaps = 19/236 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + ++V ++ + L G + I + +D L T ++ + +ISL+ Sbjct: 49 IIVIIVFSLLALKLSGKKVAV----FTAIGLLFIDCIELWPQTMETLALVIVSTLISLII 104 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 LA++S V+ PILD MQ++P +L V++F GKV GA IF++ Sbjct: 105 GIPLGILASRSEGFNRVIRPILDFMQTMPAFVYLIPAVLFFGM---GKVPGAISTVIFSM 161 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +P D+ E +RSF + Q + + +P ++P ++ + ++ Sbjct: 162 PPA-----VRLTNLGIRQVPEDVIEAARSFGSTKSQMLYKVQIPIALPTILAGVNQTIML 216 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV S MI G G+G + I + ++ + + + ++ + + D++ Sbjct: 217 SLSMVVISAMIGAG-------GLGREVYNGITQMEIGSGFESGIAVVILAMVLDRI 265 Score = 78.0 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 81/276 (29%), Gaps = 11/276 (3%) Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356 + FF + N + + ++ +S I Sbjct: 1 MFTFHVGPFFEFIVNWLTDNMEPFFHLITLINSTLIEGLETVLLSVPSIIVIIVFSLLAL 60 Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 + + + D + + T+ V+V +I+ II IP+GI + Sbjct: 61 KLSGKKVAVFTAIGLLFIDCIELWPQTMETLALVIVSTLISLIIGIPLGILASRSEGFNR 120 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 I+P + PA V+ V + + + + + G P Sbjct: 121 VIRPILDFMQTMPAFVYLIPAVLFFGMGKVPGAISTVIF----SMPPAVRLTNLGIRQVP 176 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 D E A SF T + + +P P + G + + ++S + G Sbjct: 177 EDVIEAARSFGSTKSQMLYKVQIPIALPTILAGVNQTIMLSLSMVVISAMIGAG------ 230 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + + + + L+R Sbjct: 231 -GLGREVYNGITQMEIGSGFESGIAVVILAMVLDRI 265 >gi|167761565|ref|ZP_02433692.1| hypothetical protein CLOSCI_03976 [Clostridium scindens ATCC 35704] gi|167661231|gb|EDS05361.1| hypothetical protein CLOSCI_03976 [Clostridium scindens ATCC 35704] Length = 219 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 5/213 (2%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 + ++ R+ + + ++ I WF V + + + Sbjct: 11 DRMRAATNAGDRGRWRKFGGRNRNVAALIGLAVICIIWFAAAHIVDKPFLFPYLEDVFKE 70 Query: 371 FTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 + LYV+ ITM RV+ + A II P+G+ +G+ P I + PF L P Sbjct: 71 VGFSLTDLYVLRNLGITMRRVLTGSLYAFIIGFPLGMLMGYSPQILKALSPFMNSLRQVP 130 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + PL + L+ F + I+ N I+G D+ A S + Sbjct: 131 IMAWVPLAIVWFGIGDG----PTIFLIAFSGIFTIILNTISGVQDISKDYYHAARSMGAS 186 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + + ++LPG P +TG A G W + I Sbjct: 187 TFGVIKDVVLPGSLPGVLTGLRLAVGLGWMSVI 219 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 71/162 (43%), Gaps = 8/162 (4%) Query: 47 DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 D+ V +L + + T R+L+ + + + F L S ++ L P ++ Sbjct: 66 DVFKEVGFSLTDLYVLRNLGITMRRVLTGSLYAFIIGFPLGMLMGYSPQILKALSPFMNS 125 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 ++ +PI+ ++ +V+F IF I S ++ + + + +I +D Sbjct: 126 LRQVPIMAWVPLAIVWFGIGDGP--------TIFLIAFSGIFTIILNTISGVQDISKDYY 177 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVV 208 +RS S + + +P S+PG++ + +++ GW V+ Sbjct: 178 HAARSMGASTFGVIKDVVLPGSLPGVLTGLRLAVGLGWMSVI 219 >gi|197295196|ref|YP_002153737.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944675|emb|CAR57279.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 275 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 27/263 (10%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------- 377 + R W V VA + W + + + Sbjct: 8 HRSSAPGTRRTGGARSPAPAAAGWLGVAGLVATVVVWWAAIHALTEPGSLGRQFAPDSAF 67 Query: 378 ----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +++ +++ R+ V + A + +P+G+ +G P + + P Q L Sbjct: 68 ASLRSLCADDHLLEHALVSLRRIGVGLGAALLAGVPLGLLLGRVPWVERMLSPTFQFLRM 127 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 + PL V + L+ F W +L + AG + ++ +S Sbjct: 128 VSPLSWMPLAVMSFGIGDR----AIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLA 183 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 T +I+LP I + G A G W + +E+ GLG I ++ Sbjct: 184 ATRSELLVHIVLPAIAGPLLNGIRLAIGILWIVLVPAEMLG------VNAGLGYLILDTR 237 Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570 ++ ++ E+ ++++ AL+ Sbjct: 238 DRLAYAELTAVIVVIGALGFALD 260 Score = 97.7 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 23/254 (9%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH---------SLP 62 +R P L ++ + + I T P + L Sbjct: 21 ARSPAPAAAGWLGVAGLVATVVVWWAAIHALTEPGSLGRQFAPDSAFASLRSLCADDHLL 80 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++A + R+ + +LL L + + +L P ++ + L ++ V+ Sbjct: 81 EHALVSLRRIGVGLGAALLAGVPLGLLLGRVPWVERMLSPTFQFLRMVSPLSWMPLAVMS 140 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + A F + + +W + S + I R ++ S + + + Sbjct: 141 FGIG--------DRAIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLAATRSELLVH 192 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P L+ + +++ W +V +EM+ V G+G I + Sbjct: 193 IVLPAIAGPLLNGIRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYAELT 246 Query: 243 YAMLTMLGVIFLYD 256 ++ + + F D Sbjct: 247 AVIVVIGALGFALD 260 >gi|222086307|ref|YP_002544840.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723755|gb|ACM26911.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 303 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 16/237 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + F++++ ++ ++ + + I I + V L T + +I++ Sbjct: 65 NTPWFIVILVMMGVVYAASRNLKI-VAGTAISMILIGVCGLWGDTMVTLAMVTVCTLIAI 123 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + L A+S RL ++ P LD+MQ++P +L V+ F GKV G I+ Sbjct: 124 VIGLPIGILMARSDRLQSIINPTLDVMQTMPTFVYLLPVVMIFG---IGKVPGLIAVVIY 180 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + + +++ E + +F S QK + + +P ++P ++ + ++ Sbjct: 181 AVP-----PIIRLTNLGIRLVDKEVLEAADAFGSSHRQKLFNVQIPLALPTIMAGINQTI 235 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + M+ VG G+G AI Q + ++ + ++D+ Sbjct: 236 MMALAMVVVASMVGVG-------GLGKNTLQAINNQFITVGFLNGFALVAIAIIFDR 285 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 71/231 (30%), Gaps = 11/231 (4%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 + + + A + + V + +T+ V V +IA +I Sbjct: 66 TPWFIVILVMMGVVYAASRNLKIVAGTAISMILIGVCGLWGDTMVTLAMVTVCTLIAIVI 125 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 +P+GI + + S I P ++ P V+ VV + + ++ Sbjct: 126 GLPIGILMARSDRLQSIINPTLDVMQTMPTFVYLLPVVMIFGIG----KVPGLIAVVIYA 181 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 I+ G + E A +F + + + +P P + G A Sbjct: 182 VPPIIRLTNLGIRLVDKEVLEAADAFGSSHRQKLFNVQIPLALPTIMAGINQTIMMALAM 241 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +V+ + G GLG ++ L + + +R Sbjct: 242 VVVASMVGVG-------GLGKNTLQAINNQFITVGFLNGFALVAIAIIFDR 285 >gi|213966520|ref|ZP_03394686.1| taurine ABC transporter, permease protein [Corynebacterium amycolatum SK46] gi|213950836|gb|EEB62252.1| taurine ABC transporter, permease protein [Corynebacterium amycolatum SK46] Length = 314 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 97/212 (45%), Gaps = 17/212 (8%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L Q+ T R+ + + + + + ++S+ + V+ P + ++S+P LG++ + Sbjct: 116 LWQHLLATLERIAVGLSLGIAAGVLVGLVLSRSQAVRAVVEPYISFLRSLPPLGYIGLLI 175 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 V+F +++ + +F + +T + + IP+D +R+ + Q F Sbjct: 176 VWFGVG--------DVSKVVLLFLATFPIITIATLTGIIGIPQDWNRAARTLGATNSQVF 227 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 ++ VP ++PGL+ + ++ W +VA+EM +PGIG ++ + + Sbjct: 228 RHVIVPGTLPGLINGIRLANGMSWACIVAAEM------NDGIPGIGGVAYVSGTQLETAL 281 Query: 241 ILYAMLTMLGVIFLYDQLLF---RPMIVWSNK 269 + AM+ + + DQ+L R + W K Sbjct: 282 TIAAMILIGITAVIVDQILLFAERRLAPWHGK 313 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 80/202 (39%), Gaps = 15/202 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 T+ R+ V + + + VG+ + + + ++P+ L + P + L++ Sbjct: 121 LATLERIAVGLSLGIAAGVLVGLVLSRSQAVRAVVEPYISFLRSLPPLGYIGLLIVWFGV 180 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 ++ +L+ T I + G P D+ A + T + +R++I+PG Sbjct: 181 GDVSK----VVLLFLATFPIITIATLTGIIGIPQDWNRAARTLGATNSQVFRHVIVPGTL 236 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G +W + +E+ + G+G S + + ++++ Sbjct: 237 PGLINGIRLANGMSWACIVAAEM------NDGIPGIGGVAYVSGTQLETALTIAAMILIG 290 Query: 564 CFVLALNRFLWHPLYLYGTRCL 585 + +++ L L+ R L Sbjct: 291 ITAVIVDQIL-----LFAERRL 307 >gi|328881264|emb|CCA54503.1| Glycine betaine ABC transport system, permease or glycine betaine-binding protein OpuABC [Streptomyces venezuelae ATCC 10712] Length = 603 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 94/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L GI+ ++ ++ + +D L A T +L A +++L+ Sbjct: 49 LLFAGILAVVAWWLRGLAAGVLAFAGFAL-VDSVQLWDEAMATLSLVLVATLVTLVIAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S+ + VL P+LD MQ++P + +L +++F G V G +FA+ Sbjct: 108 LGIWAARSKTVSAVLRPVLDFMQTMPAMVYLIPGIIFFGV---GVVPGIIATIVFALPPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDGELVEAAEAFGTTPRNTLLRVQLPLALPTIMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 220 MVVIAGMVGGGGLGGA-------VYRAIGNVDIGLGFEAGVSIVVLAMYLDRM 265 Score = 82.7 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 70/234 (29%), Gaps = 12/234 (5%) Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350 + ++ S + S + + + + + W+ Sbjct: 3 RLPLGEWVDSSVDWLQAQFSWLFDAVSTGVTGLYDGIDAVLSAPQPLLFAGILAVVAWW- 61 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + A +A+ + + + + T+ V+V ++ +I +P+GIW Sbjct: 62 LRGLAAGVLAFAGFALVDSVQLWDE-------AMATLSLVLVATLVTLVIAVPLGIWAAR 114 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +S+ ++P + PA V+ + + + + + Sbjct: 115 SKTVSAVLRPVLDFMQTMPAMVYLIPGIIFFGVGVVPGIIATIVF----ALPPGVRMTEL 170 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 G + E A +F T + LP P + G + +++ Sbjct: 171 GIRQVDGELVEAAEAFGTTPRNTLLRVQLPLALPTIMAGVNQVIMLGLSMVVIA 224 >gi|317491340|ref|ZP_07949776.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920887|gb|EFV42210.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 368 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 16/236 (6%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIV-PITLDVHSLPQYASRTTLRMLSAMVISLLF 82 I I+ L Q + ++ + + A T +L+++ +L Sbjct: 115 GMPAPIAILVFALIAWQCAGLGMGAATLIGLVAIGAIGAWSQAMVTLALVLTSLFFCMLI 174 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 A+S+ V+ P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 175 GLPLGIWLARSKGAARVIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA- 230 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 231 ----LPPIVRLTSLGIQQVPADLIEAAESFGSSPRQMLFKVQLPLAMPTIMAGVNQTLML 286 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 287 ALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 335 Score = 90.0 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 + V IAWQ G + T ++ + +G +T+ V+ + +I +P+G Sbjct: 120 IAILVFALIAWQCAGLGMGAATLIGLVAIGAIGAWSQAMVTLALVLTSLFFCMLIGLPLG 179 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+ + I+P + PA V+ +V N+ ++ I I+ Sbjct: 180 IWLARSKGAARVIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIV 235 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 G P D E A SF + + + LP P + G A + +++ Sbjct: 236 RLTSLGIQQVPADLIEAAESFGSSPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIAS 295 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G + + + L+R Sbjct: 296 MIAVG-------GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRL 335 >gi|332711923|ref|ZP_08431853.1| ABC-type proline/glycine betaine transport system, permease component [Lyngbya majuscula 3L] gi|332349251|gb|EGJ28861.1| ABC-type proline/glycine betaine transport system, permease component [Lyngbya majuscula 3L] Length = 664 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 83/194 (42%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A + +++A+V ++ + A S R+ VL P+LD MQ++P +L V+ F Sbjct: 114 AMVSLSLVVTAVVFCMVIGITFGIACASSDRIEKVLRPLLDAMQTLPSFVYLVPVVMLFG 173 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G +FAI + + + ++ E + +F + Q + + Sbjct: 174 ---IGAVPGVMATCVFAIP-----PLIRLTNLGIRQVSTEVVEAAIAFGSTPTQMLFEVQ 225 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +MP ++ + ++ V + MI VG G+G + + ++ Sbjct: 226 IPLAMPTILAGVNQAILLALSMSVVTSMIGVG-------GLGQMVLQGLGRVNVGLAAVG 278 Query: 245 MLTMLGVIFLYDQL 258 L+++ + + D++ Sbjct: 279 GLSIVLIAVMLDRI 292 Score = 86.1 bits (212), Expect = 2e-14, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 11/207 (5%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y V + L +++ VV ++ +I I GI I ++P + Sbjct: 97 YSVAALSLIGFLGAWTQAMVSLSLVVTAVVFCMVIGITFGIACASSDRIEKVLRPLLDAM 156 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P+ V+ VV + + + I ++ G + E A + Sbjct: 157 QTLPSFVYLVPVVMLFGIGAVPGVMATCVFAI----PPLIRLTNLGIRQVSTEVVEAAIA 212 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 F T + + +P P + G A A + S+V+ + G GLG + + Sbjct: 213 FGSTPTQMLFEVQIPLAMPTILAGVNQAILLALSMSVVTSMIGVG-------GLGQMVLQ 265 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +G L + + L+R Sbjct: 266 GLGRVNVGLAAVGGLSIVLIAVMLDRI 292 >gi|257867410|ref|ZP_05647063.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC30] gi|257873741|ref|ZP_05653394.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC10] gi|257877492|ref|ZP_05657145.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC20] gi|257801466|gb|EEV30396.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC30] gi|257807905|gb|EEV36727.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC10] gi|257811658|gb|EEV40478.1| glycine betaine/L-proline ABC transporter [Enterococcus casseliflavus EC20] Length = 574 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L T +L + ++S++ L AKS + ++ PILD MQ++P +L Sbjct: 88 QGLWTDLMNTVTLVLLSSLVSIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIP 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA + + I R+L E S SF +GWQ Sbjct: 148 AVAFFG---IGMVPGVFASVIFA-----LPPTVRMTNLGIRQISRELVEASDSFGGTGWQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 200 KLIKLELPLAKSTILAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 252 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+ Sbjct: 253 GNGFVSGVSLVILAIIMDRF 272 Score = 69.2 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 16/230 (6%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-MFRVVVLIIIASIIW----I 402 +V A + + FT+ +L++ G T + V L++++S++ I Sbjct: 54 LLMIVLLTAAAFFVSRKKFGLPAFTFVGLLFIYNQGLWTDLMNTVTLVLLSSLVSIIIGI 113 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GI + S + P + P V+ V+ + + Sbjct: 114 PLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALP 169 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G + E + SF TGW+ + LP + G A + + Sbjct: 170 PTVRMTNLGIRQISRELVEASDSFGGTGWQKLIKLELPLAKSTILAGVNQTTMLALSMVV 229 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++ + GLG + + ++ + + + + ++RF Sbjct: 230 IASMIG-------APGLGRGVLSALQRAQVGNGFVSGVSLVILAIIMDRF 272 >gi|153949190|ref|YP_001399348.1| ABC aliphatic sulfonates ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|167466455|ref|ZP_02331159.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis FV-1] gi|170022674|ref|YP_001719179.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|152960685|gb|ABS48146.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pseudotuberculosis IP 31758] gi|169749208|gb|ACA66726.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] Length = 264 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 17/240 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +V L Q+ + ++ R L I V + SR +L Sbjct: 39 LPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLN 98 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 + +++++P L + +++F E A IF + ++ + + Y + NI Sbjct: 99 SSVQMIRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIKNI 150 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E++RS+ LSG++ + +P ++P ++ + ++ W ++ +E I Sbjct: 151 DSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANS---- 206 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278 GIG A + ++ A++ + L D QLL R + W ++ + Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWLRWHPAYQQKSGEAQ 264 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIWLGCITMFRV 390 R++ + V VA+ W S + + I+ +R Sbjct: 10 HRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRA 69 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 ++ I I + +G+ G + Q++ P PLV+ Sbjct: 70 LIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGI----DES 125 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G + E+A S+ ++G+R ++LPG P + G Sbjct: 126 AKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGV 185 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 186 RFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239 >gi|91223853|ref|ZP_01259117.1| glycine betaine/L-proline transport system permease [Vibrio alginolyticus 12G01] gi|91191345|gb|EAS77610.1| glycine betaine/L-proline transport system permease [Vibrio alginolyticus 12G01] Length = 361 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T +L+A+ LL A+S+ + PILD MQ+ P +L V+ F Sbjct: 139 AMTTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 198 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA + + + +P +L E SF + Q + + Sbjct: 199 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 250 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ VV + MI VG G+G + I D+ Sbjct: 251 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 303 Query: 245 MLTMLGVIFLYDQL 258 L ++ + L D++ Sbjct: 304 GLGIVILAILLDRI 317 Score = 87.7 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 12/280 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + S L+ V+ IR + + + + Sbjct: 50 PFQDAVLPLDSWVESGLNWLVEHGRPVFQAIRVPIDFILTSFETALVSTPAPIMVLILFL 109 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 +V + ++ T+ V+ + +I +P+GIW+ Sbjct: 110 LAWQFSNVKLGFSTLV-SLVFIGLIGAWSQAMTTLALVLTAVFFCLLIGLPMGIWLARSQ 168 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + ++P + PA V+ +V N+ ++ I ++ I G Sbjct: 169 TAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILGI 224 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P + E SF + I LP P + G + + +++ + + G Sbjct: 225 QQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-- 282 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 283 -----GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317 >gi|300775527|ref|ZP_07085388.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Chryseobacterium gleum ATCC 35910] gi|300505554|gb|EFK36691.1| glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Chryseobacterium gleum ATCC 35910] Length = 275 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 106/240 (44%), Gaps = 16/240 (6%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD-VHSLPQYASRTTLRMLSAMVI 78 + L + I+ L + + +V ++L + L + T + + + Sbjct: 42 WVLTNTPFYVIILFFTLLALWKAGKAIAVVTAAGLSLIFLMGLWKETMETLALIFVSTIT 101 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 +L+ + LAAKS+ ++ P+LD+MQ++P +L V++F GKV GA Sbjct: 102 ALILSIPLGILAAKSKIADKIIRPLLDLMQTMPAFVYLIPAVLFFS---IGKVPGAFATI 158 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 IFA+ + + +P+D+ E +R+F +G Q + + +P +M ++ + Sbjct: 159 IFAMPPA-----VRLTALGIEAVPKDIVEAARAFGATGRQILFKVELPLAMKTILTGINQ 213 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 ++ VV + MI G G+G + I D+ + L+++ + + D++ Sbjct: 214 TILLSLSMVVIAGMIAAG-------GLGEKVLEGINNLDIGLGFESGLSVVILAIILDRI 266 Score = 78.4 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 79/238 (33%), Gaps = 16/238 (6%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394 + ++L F V+ +A G + T + + +G T+ + V Sbjct: 40 IEWVLTNTPFYVIILFFTLLALWKAGKAIAVVTAAGLSLIFLMGLWKETMETLALIFVST 99 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 I A I+ IP+GI I+P L+ PA V+ V S + + Sbjct: 100 ITALILSIPLGILAAKSKIADKIIRPLLDLMQTMPAFVYLIPAVLFFSIGKVPGAFATII 159 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + G A P D E A +F TG + + LP +TG Sbjct: 160 FAMPPAVRL----TALGIEAVPKDIVEAARAFGATGRQILFKVELPLAMKTILTGINQTI 215 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + E L + + L+R Sbjct: 216 LLSLSMVVIAGMIAAG-------GLGEKVLEGINNLDIGLGFESGLSVVILAIILDRI 266 >gi|239815502|ref|YP_002944412.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gi|239802079|gb|ACS19146.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 383 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 17/232 (7%) Query: 29 IGIINILLHGIQETTVPRDIVDIVPITLDVHSL--PQYASRTTLRMLSAMVISLLFTFVY 86 + +I ++ + + L V L A T +L+++V ++ Sbjct: 114 LAMIALIGLFAWQFAGRALAIGTTAALLLVAMLGIWPEAMVTLSLVLTSLVFCMIIGLPL 173 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L A S R ++ P+LD MQ+ P +L V+ F G V G + IFA+ Sbjct: 174 GVLLASSDRAQRLMRPVLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIIFALA--- 227 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + L + DL E +R++ S WQ + +P +MP ++ + ++ Sbjct: 228 --PLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSM 285 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + D+L Sbjct: 286 VVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRL 330 Score = 87.7 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 86/238 (36%), Gaps = 16/238 (6%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLI 394 V +L + + AWQ G + T +L V LG +T+ V+ + Sbjct: 104 VQGLLTGLPTLAMIALIGLFAWQFAGRALAIGTTAALLLVAMLGIWPEAMVTLSLVLTSL 163 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 + II +P+G+ + ++P + PA V+ VV N+ + Sbjct: 164 VFCMIIGLPLGVLLASSDRAQRLMRPVLDAMQTTPAFVYLVPVVMLFGIG----NVPGVI 219 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + I ++ G D E A ++ + W+ + LP P + G A Sbjct: 220 VTIIFALAPLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQAL 279 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + +G L + ++L+R Sbjct: 280 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRL 330 >gi|300709406|ref|YP_003735220.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3] gi|299123089|gb|ADJ13428.1| ABC transporter permease protein [Halalkalicoccus jeotgali B3] Length = 274 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 23/271 (8%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 T+ ++ F + + + + + + +F + + ++ + Sbjct: 2 STVDRVKRRFDAGTVPVLTKRARQALSVVLFFVLWAVLVRLEILGFGRFVGPVPALSTFV 61 Query: 378 YVIWLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + + RVVV +++A+ IP+G+ IG + P ++ Sbjct: 62 SALLGAPMTGSGATIYQHAAFSAMRVVVAMVLATATAIPLGLVIGASRRWEDALFPALEV 121 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 P + P+ + + + + ++ G + IL N I G +++ A Sbjct: 122 FRPVPPVAWVPIALLLMPTFRSG----VIFVVFLGAFFPILVNTIEGVGTVDDEYLRAAE 177 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S +R++I P P VTG T G AW + +E+ + G Sbjct: 178 SLGADSREVFRHVIFPATLPSIVTGVSTGVGLAWITVVAAEMIAGGIGIGYII------F 231 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 ++ V +G++ + A ++ Sbjct: 232 QAYRLLQTDVVAVGMIAIGILGYASATVVYR 262 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 103/260 (39%), Gaps = 21/260 (8%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI-------VPITLDVHSL 61 P +++R + +L FVL ++ + + G P + P+T ++ Sbjct: 17 PVLTKRARQALSVVLFFVLWAVLVRLEILGFGRFVGPVPALSTFVSALLGAPMTGSGATI 76 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 Q+A+ + +R++ AMV++ + SRR L P L++ + +P + ++ ++ Sbjct: 77 YQHAAFSAMRVVVAMVLATATAIPLGLVIGASRRWEDALFPALEVFRPVPPVAWVPIALL 136 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 G IF +F + + + + + + + + S + F Sbjct: 137 LMPTFRSG--------VIFVVFLGAFFPILVNTIEGVGTVDDEYLRAAESLGADSREVFR 188 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 ++ P ++P +V + + W VVA+EMI G + + A + + Sbjct: 189 HVIFPATLPSIVTGVSTGVGLAWITVVAAEMIAGGIGIGYII------FQAYRLLQTDVV 242 Query: 242 LYAMLTMLGVIFLYDQLLFR 261 M+ + + + +++R Sbjct: 243 AVGMIAIGILGYASATVVYR 262 >gi|86749954|ref|YP_486450.1| binding-protein dependent transport system inner membrane protein [Rhodopseudomonas palustris HaA2] gi|86572982|gb|ABD07539.1| Binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris HaA2] Length = 266 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 88/259 (33%), Gaps = 25/259 (9%) Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI---- 385 R + + F ++ + + W + +++ G I Sbjct: 2 RGRSFAVRLRSIALAVVVPFGLLLLWDVLVRWTGTRLVPPPSGVAVMMWDFAFGGIYDDA 61 Query: 386 -----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ RV +A+++ IP+G+ IG P + + + P LL P + Sbjct: 62 YSGSLPIHFWKSVQRVYGGFFLAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWL 121 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + L+ G + IL N I G + E A G + + Sbjct: 122 PLSMIFFGLGPKS----AVFLVFLGAFYPILLNTIFGVKSVDARLFEAAGMLGCRGPQLF 177 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 R ++LP P G AW +V E+ GLGA I + Sbjct: 178 RAVVLPAALPSIFNGLRLGASFAWILIVVGEM------TGVPEGLGAVIMDGRTLSRTDL 231 Query: 555 VVLGVLIMCCFVLALNRFL 573 V+ G++I+ +R L Sbjct: 232 VITGMIIIGITGFLSDRIL 250 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 17/213 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SLP + ++ R+ ++ L + + L +L P L +++ IP+ +L Sbjct: 64 GSLPIHFWKSVQRVYGGFFLAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWLPL 123 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++++F +A+F +F + + + + ++ L E + G Q Sbjct: 124 SMIFFGLG--------PKSAVFLVFLGAFYPILLNTIFGVKSVDARLFEAAGMLGCRGPQ 175 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P + + + S W +V EM V + G+G+ I Sbjct: 176 LFRAVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPE------GLGAVIMDGRTLSRT 229 Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268 ++ M+ + FL D++L + WS Sbjct: 230 DLVITGMIIIGITGFLSDRILVALSNYFLRWSP 262 >gi|325290257|ref|YP_004266438.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] gi|324965658|gb|ADY56437.1| binding-protein-dependent transport systems inner membrane component [Syntrophobotulus glycolicus DSM 8271] Length = 264 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 84/219 (38%), Gaps = 14/219 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P I + L+ +L ++ + R+ ++ + L K++ L P Sbjct: 49 PSPSKIYVAGWLMLENGTLLEHLMASLGRLAYGFCLAAVLAVPAGILIGKTKSFAQWLNP 108 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L +Q IP + ++ +++ E + + I + + + + + ++ Sbjct: 109 TLSFLQHIPPIAWIPLFILWLGIE--------EASKVAVITYASFFPIFLNTVYGVKSVD 160 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L EV R+F L+ Q + +P + + + + MS W +V +E+I Sbjct: 161 PKLVEVGRAFMLTPGQMIKRVYIPSATMPIFVGLRLGMSNCWRALVGAELIAAST----- 215 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GIG+ I A + + + T+ + D +L + Sbjct: 216 -GIGALITQARQSSQPDMMFVGIFTIGIAGIVIDGILLK 253 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 77/201 (38%), Gaps = 10/201 (4%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ ++ R+ +A+++ +P GI IG + + P L P + Sbjct: 63 ENGTLLEHLMASLGRLAYGFCLAAVLAVPAGILIGKTKSFAQWLNPTLSFLQHIPPIAWI 122 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL + + + ++ + + + I N + G + EV +F +T + Sbjct: 123 PLFILWLGIEEASK----VAVITYASFFPIFLNTVYGVKSVDPKLVEVGRAFMLTPGQMI 178 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 + + +P G W A + +E+ + +TG+GA I ++ + Sbjct: 179 KRVYIPSATMPIFVGLRLGMSNCWRALVGAELIA------ASTGIGALITQARQSSQPDM 232 Query: 555 VVLGVLIMCCFVLALNRFLWH 575 + +G+ + + ++ L Sbjct: 233 MFVGIFTIGIAGIVIDGILLK 253 >gi|91777773|ref|YP_552981.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91690433|gb|ABE33631.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 269 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 17/258 (6%) Query: 327 FPENFLQLCSNQRVSY-MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383 FP F +L RV+ L + ++ + T+ +L +I G Sbjct: 11 FPARFGRLTRFARVAGQRLSLLAIFLILWWVAAQRVPAFILPGPGKTWNALLDLIATGTF 70 Query: 384 ----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 IT++RVV ++A+++ P+GI +G + S +P ++ A ++ + Sbjct: 71 AEDLGITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAIWAIFALI 130 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + ++ IL NV GA + ++ E+A SF ++ + I L Sbjct: 131 WFGISNGT----TIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSRSKVMTKIYL 186 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P + PY+ +GA A G W S+V+E + G+G + ++ + +V Sbjct: 187 PTVLPYFFSGARLAFGFGWRVSLVAETIG------SSNGVGYRLRQAADLVQTDQVFAWT 240 Query: 560 LIMCCFVLALNRFLWHPL 577 L M ++ L + PL Sbjct: 241 LTMVVLMVVLEYGILKPL 258 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 102/264 (38%), Gaps = 19/264 (7%) Query: 5 NILPPFISR-----RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59 ++ P R R+ LLA L++ + P + + + Sbjct: 9 SVFPARFGRLTRFARVAGQRLSLLAIFLILWWVAAQRVPAFILPGPGKTWNALLDLIATG 68 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + T R+++ +++ L L +RRLG P+L ++ ++ + F Sbjct: 69 TFAEDLGITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAIWAIFA 128 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F IF +F + + +++Q ++ + E++RSF++S + Sbjct: 129 LIWFGISNG--------TTIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSRSKV 180 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P +P ++ GW + +E I + G+G + A Sbjct: 181 MTKIYLPTVLPYFFSGARLAFGFGWRVSLVAETIGSSN------GVGYRLRQAADLVQTD 234 Query: 240 AILYAMLTMLGVIFLYDQLLFRPM 263 + LTM+ ++ + + + +P+ Sbjct: 235 QVFAWTLTMVVLMVVLEYGILKPL 258 >gi|226314655|ref|YP_002774551.1| glycine betaine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097605|dbj|BAH46047.1| glycine betaine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 281 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 16/258 (6%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHS 60 FL++ + I + + L II L + V + + + L Sbjct: 29 FLFDFISAGIGGTVDLFSWILTGIPFWALIILFTLLAYRAGKVAIALFTFIGLLLIQNLG 88 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 +++ T +L+A +IS++ AK+ + V+ P+LD MQ++P +L + Sbjct: 89 YWEHSMETLALVLTAGLISVIIGIPVGIWCAKNDSVQKVVTPLLDFMQTMPAFVYLIPAI 148 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +F GKV G + IFA+ + +P DL E S +F + WQK Sbjct: 149 FFFGL---GKVPGVIASVIFAMP-----PTIRLTNLGIRQVPADLIEASEAFGSTYWQKL 200 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P + ++ + S+ VV + MI G+G+ + A+ + + Sbjct: 201 TKVQLPIAKTTMMAGINQSIMLALSMVVIASMI-------GAKGLGADVYRAVTQIKIGE 253 Query: 241 ILYAMLTMLGVIFLYDQL 258 A L ++ + L D+L Sbjct: 254 GFEAGLAIVILAILLDRL 271 Score = 81.9 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 16/237 (6%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLII 395 S++L F + + +A+++ + FT+ +L + LG T+ V+ + Sbjct: 46 SWILTGIPFWALIILFTLLAYRAGKVAIALFTFIGLLLIQNLGYWEHSMETLALVLTAGL 105 Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I+ II IPVGIW + + P + PA V+ + + + + Sbjct: 106 ISVIIGIPVGIWCAKNDSVQKVVTPLLDFMQTMPAFVYLIPAIFFFGLGKVPGVIASVIF 165 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G P D E + +F T W+ + LP + G + Sbjct: 166 ----AMPPTIRLTNLGIRQVPADLIEASEAFGSTYWQKLTKVQLPIAKTTMMAGINQSIM 221 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A + +++ + GLGA + + + E L + + L+R Sbjct: 222 LALSMVVIASMIG-------AKGLGADVYRAVTQIKIGEGFEAGLAIVILAILLDRL 271 >gi|325284546|ref|YP_004257085.1| ABC-type transporter, integral membrane subunit [Deinococcus proteolyticus MRP] gi|324316720|gb|ADY27831.1| ABC-type transporter, integral membrane subunit [Deinococcus proteolyticus MRP] Length = 264 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ RV+V + +A +I P+G+ +G + +P QLL + PL V + Sbjct: 74 LVSLKRVMVGLGLAFVIGAPLGLLVGSSRLLERATEPAFQLLRMISPLSWMPLAVMVLGV 133 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ W ILF G + ++ S T + +I LPGI Sbjct: 134 GDA----PIYLLLALAGLWPILFAAAGGVKNLNASWLDLGRSLSATRGEMFWHITLPGIL 189 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A G W + E+ GLG +I ++ ++ ++PE++ V+++ Sbjct: 190 GSLLQGVRLAIGTLWILLVPCEMLG------VRAGLGYFILDTRDRLAYPELMATVVLIG 243 Query: 564 CFVLALN 570 L+ Sbjct: 244 LLGYLLD 250 Score = 99.6 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 82/218 (37%), Gaps = 14/218 (6%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 E P + + L +L ++ + R++ + ++ + L SR L Sbjct: 47 FLEQFSPGAALPALTRLLAEGTLWEHLLVSLKRVMVGLGLAFVIGAPLGLLVGSSRLLER 106 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 P +++ I L ++ V+ + LA +W + F+ + Sbjct: 107 ATEPAFQLLRMISPLSWMPLAVMVLGVGDAPIYLLLALAG--------LWPILFAAAGGV 158 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 N+ ++ RS + + FW++ +P + L+ + +++ W +V EM+ V Sbjct: 159 KNLNASWLDLGRSLSATRGEMFWHITLPGILGSLLQGVRLAIGTLWILLVPCEMLGV--- 215 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 G+G +I ++ ++ + + +L D Sbjct: 216 ---RAGLGYFILDTRDRLAYPELMATVVLIGLLGYLLD 250 >gi|226309964|ref|YP_002769858.1| glycine betaine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226092912|dbj|BAH41354.1| probable glycine betaine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 279 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 88/197 (44%), Gaps = 15/197 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 T +L+A +IS+ L A+ ++ PILD+MQ++P +L + Sbjct: 87 WDETMETLGLVLTATMISIAIGIPVGILCARHDTFRNLVTPILDLMQTMPAFVYLIPAIF 146 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F G+V G + IFA + + + +P ++EE + +F +GWQK Sbjct: 147 FFGL---GEVPGVIASVIFA-----LPPIVRLTNLGIRQVPAEMEEAADAFGATGWQKLV 198 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P++ ++ + + VV + MI G+G+ + A+ + D+ Sbjct: 199 KVQLPYAKSTILAGVNQCIMLALSMVVIAAMI-------GAKGLGADVYRAVSQVDIGRG 251 Query: 242 LYAMLTMLGVIFLYDQL 258 A L+++ + + D+L Sbjct: 252 FEAGLSIVIIAIVLDRL 268 Score = 85.0 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 11/220 (5%) Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 + S+ + V + L T+ V+ +I+ I IPVGI Sbjct: 60 AAAWVFAGRASMVFTVVGLSLIHNLGYWDETMETLGLVLTATMISIAIGIPVGILCARHD 119 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + + P L+ PA V+ + + + + I+ G Sbjct: 120 TFRNLVTPILDLMQTMPAFVYLIPAIFFFGLGEVPGVIASVIF----ALPPIVRLTNLGI 175 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P + +E A +F TGW+ + LP + G A + +++ + Sbjct: 176 RQVPAEMEEAADAFGATGWQKLVKVQLPYAKSTILAGVNQCIMLALSMVVIAAMIG---- 231 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLGA + + + L + + L+R Sbjct: 232 ---AKGLGADVYRAVSQVDIGRGFEAGLSIVIIAIVLDRL 268 >gi|328542595|ref|YP_004302704.1| ABC transporter permease [polymorphum gilvum SL003B-26A1] gi|326412341|gb|ADZ69404.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1] Length = 294 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 98/235 (41%), Gaps = 19/235 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L ++GI+ ++ + T + + + + + RT + + +++ Sbjct: 61 LVLAAIVGIVFLMSRSWRITLGSLAAL----MAIGYLGMWEDTMRTIAMVAVCTLTAIVL 116 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 A+S RL ++ P+LD+MQ++P+ +L V+ F GKV G I+AI Sbjct: 117 GIPIGIAMARSDRLQALVNPVLDLMQTMPVFVYLIPVVMIFGL---GKVPGVIAVVIYAI 173 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 M + + D+ E + +F S WQK + +P ++P ++ + + Sbjct: 174 P-----PMIRLTNLGIRLVSPDVLEAADAFGSSSWQKLRNVQLPLALPTIMAGINQCIMM 228 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + AI Q + L ++ + ++D+ Sbjct: 229 SLAMVVVASMIGV-------RGLGQPVLQAINNQYFTLGVLNGLAIVAIAIIFDR 276 Score = 81.1 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 83/265 (31%), Gaps = 11/265 (4%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 + TL + + + L S + V + +W+ Sbjct: 23 ESFKAFTRAYGETLETVFEPLRQFLIGLEQLLLTSPWPLVLAAIVGIVFLMSRSWRITLG 82 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + L + T+ V V + A ++ IP+GI + + + + P L+ Sbjct: 83 SLAALMAIGYLGMWEDTMRTIAMVAVCTLTAIVLGIPIGIAMARSDRLQALVNPVLDLMQ 142 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P V+ VV + + ++ ++ G D E A +F Sbjct: 143 TMPVFVYLIPVVMIFGLG----KVPGVIAVVIYAIPPMIRLTNLGIRLVSPDVLEAADAF 198 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + W+ R + LP P + G + +V+ + GLG + ++ Sbjct: 199 GSSSWQKLRNVQLPLALPTIMAGINQCIMMSLAMVVVASMIG-------VRGLGQPVLQA 251 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNR 571 F VL L + + +R Sbjct: 252 INNQYFTLGVLNGLAIVAIAIIFDR 276 >gi|302561573|ref|ZP_07313915.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptomyces griseoflavus Tu4000] gi|302479191|gb|EFL42284.1| glycine betaine/proline ABC transporter, permease/substrate-binding protein [Streptomyces griseoflavus Tu4000] Length = 872 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 93/233 (39%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI ++ ++ T LD L + + T ++ A VI+L+ + Sbjct: 49 LLLAGIFAVIAFWLRGTFAGVLTFGGFAF-LDSLELWEDSMVTLALVIVATVIALVISVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S R+ + PILD MQ++P + +L +++F G G IFA+ Sbjct: 108 VGIWAARSDRVSAFVRPILDFMQTLPAMIYLIPAILFFG---TGPAPGIVATLIFALAPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + ++L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALPTVMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + M+ G + +I + ++ A L ++ + D++ Sbjct: 220 MAAIAGMVGTGGLGGA-------VIESIGQLNIGLGSEAGLAIVILAIYLDRM 265 Score = 85.7 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 94/277 (33%), Gaps = 20/277 (7%) Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350 + ++ + + ++ LQ ++ + + F Sbjct: 3 RIPLGDWVNSAVDWLLANVTWLFDFFKAVFTGAYDGV-NAVLQAPEPLLLAGIFAVIAFW 61 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + A + + ++ + ++D +T+ V+V +IA +I +PVGIW Sbjct: 62 LRGTFAGVLTFGGFAFLDSLELWED-------SMVTLALVIVATVIALVISVPVGIWAAR 114 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +S+ ++P + PA ++ + + ++ P + +IF + Sbjct: 115 SDRVSAFVRPILDFMQTLPAMIYL---IPAILFFGTGPAPGIVATLIF-ALAPGVRMTEL 170 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA--ITACGGAWNASIVSEVAS 528 G + E A +F T + LP P + G + G + A+I V + Sbjct: 171 GIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALPTVMAGVNQVIMLGLS-MAAIAGMVGT 229 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G +G G E L ++I+ + Sbjct: 230 GGLGGAVIESIGQL-----NIGLGSEAGLAIVILAIY 261 >gi|300309716|ref|YP_003773808.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072501|gb|ADJ61900.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 273 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 10/200 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 + ++ +++RVV +I + + +P+G+ +G I + Q++ P Sbjct: 65 LAWAFSGELVMDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPP 124 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL + N L+ G + +L N IAG + + A + + Sbjct: 125 IAYIPLAILWFGLG----NPPALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQ 180 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + ++LP PY ++G G A+ IV+E+ + + GLG I E+ E Sbjct: 181 STLFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIA------VSNGLGFRIMEAREYF 234 Query: 551 SFPEVVLGVLIMCCFVLALN 570 +++ G++ + LA++ Sbjct: 235 WSDKIIAGMITIGLLGLAID 254 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 83/212 (39%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L A + R+++ +I L S+R+ ++ + +++ IP + ++ Sbjct: 71 GELVMDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPPIAYIPL 130 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F P A+F I + + + + + +R+ S Sbjct: 131 AILWFGLGNPP--------ALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQST 182 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P ++ + + + + V+ +EMI V + G+G I A + Sbjct: 183 LFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIAVSN------GLGFRIMEAREYFWS 236 Query: 239 LAILYAMLTMLGVIFLYDQLLFR---PMIVWS 267 I+ M+T+ + D + R M+ W Sbjct: 237 DKIIAGMITIGLLGLAIDLGMSRLNNYMLRWH 268 >gi|291299893|ref|YP_003511171.1| binding-protein-dependent transporter inner membrane component [Stackebrandtia nassauensis DSM 44728] gi|290569113|gb|ADD42078.1| binding-protein-dependent transport systems inner membrane component [Stackebrandtia nassauensis DSM 44728] Length = 641 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 81/525 (15%), Positives = 165/525 (31%), Gaps = 34/525 (6%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 L V L + T ++A+++S+L +S RL +L P+LD MQ +P Sbjct: 131 ALGVMDLWDESIETLGLTIAAVLLSMLLGVPLGIWMGRSPRLRTLLSPVLDAMQIMPTFT 190 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L + F P I + AI ++ +P + E S S Sbjct: 191 YLAPMALLFSIGNPSATIATLIYAIPVSIRIA--------ALAIEQVPATVVEASESLGS 242 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + WQ + +P + L+ + ++ VV +I G+G + ++ Sbjct: 243 TRWQTMVKVRLPLARRTLLLAVNQTIMMALSMVVI-------TALIDADGLGQDVVRGLQ 295 Query: 235 EQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERT-----TGIYPADSWVLYLF 289 + ++ L A L ++ + + D+ R + +F + R G +VL Sbjct: 296 QNNVGMSLEAGLAVVVLAIILDRF-TRIHDRRTTRFTIPRVYVWGFAGACAVIGFVLTAV 354 Query: 290 RKTNFLRFIGYSSWNFFSPLSNNVKKLCRTL-GVIRFHFPENFLQLCSNQRVSYMLDIFW 348 +F + S N + + + + + I+ L V Sbjct: 355 LPKDFPEALQVSMVNPVNHVVDVITTDWYGVTSAIKDAASYGILNPMQEFLVRVPFWTII 414 Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 V WQS + L + T+ V++ +++ I+ + +G+ Sbjct: 415 AIFVFLALRFAGWQSAVTAGVCLSAIVALGLWQKSMETLVTVLLGVVLTVIVGVALGVLS 474 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G + ++P PA V+ ++ + + ++ V Sbjct: 475 GRSDRFETALRPVLDAAQTMPAFVYLVPALALFGASRFTAIVAAIVYA----APPVVRLV 530 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 G E A S T + + LP + ++ + Sbjct: 531 SDGIRGVSPSVVEAARSCGSTSRQLLWKVQLPMSRRSLLLALNQGIVMVLAMVVIGGMVG 590 Query: 529 WGHIHLRTTGLGAYIAEST-EKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + F L + + L+R Sbjct: 591 -------AEGLGETVVTGFVQTEEFGAGFAAGLAIVLLGITLDRI 628 >gi|325568907|ref|ZP_08145200.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325157945|gb|EGC70101.1| proline/glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 574 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L T +L + ++S++ L AKS + ++ PILD MQ++P +L Sbjct: 88 QGLWTDLMNTVTLVLLSSLVSIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIP 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA + + I R+L E S SF +GWQ Sbjct: 148 AVAFFG---IGMVPGVFASVIFA-----LPPTVRMTNLGIRQISRELVEASDSFGGTGWQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 200 KLIKLELPLAKSTILAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 252 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+ Sbjct: 253 GNGFVSGVSLVILAIIMDRF 272 Score = 69.2 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 16/230 (6%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-MFRVVVLIIIASIIW----I 402 +V A + + FT+ +L++ G T + V L++++S++ I Sbjct: 54 LLMIVLLTAAAFFVSRKKFGLPAFTFVGLLFIYNQGLWTDLMNTVTLVLLSSLVSIIIGI 113 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GI + S + P + P V+ V+ + + Sbjct: 114 PLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALP 169 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G + E + SF TGW+ + LP + G A + + Sbjct: 170 PTVRMTNLGIRQISRELVEASDSFGGTGWQKLIKLELPLAKSTILAGVNQTTMLALSMVV 229 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++ + GLG + + ++ + + + + ++RF Sbjct: 230 IASMIG-------APGLGRGVLSALQRAQVGNGFVSGVSLVILAIIMDRF 272 >gi|312138999|ref|YP_004006335.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311888338|emb|CBH47650.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 266 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 75/190 (39%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 + RV+ ++A+ + IP+G+ +G + ++ L+ P + PL + + Y Sbjct: 72 AASTLRVLNGFLLAAALAIPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPLTLLIIGY 131 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+ + IL N G + P E A+ + I++P Sbjct: 132 GDRS----TIFLIFVAAFFPILLNTTVGVAQVPPRLLEAAAMLGTPKAKTLYKIVIPSAM 187 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 +G A G +W +V E +TGLGA I ++ + ++ G++ + Sbjct: 188 QSITSGLRIALGLSWVVLVVGETVGI------STGLGAMITQARDMSRTDLIIAGMVFIG 241 Query: 564 CFVLALNRFL 573 +RF+ Sbjct: 242 LAGFVTDRFM 251 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 81/201 (40%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL ++ + +TLR+L+ +++ L + + L +++++ IP+ + Sbjct: 65 GSLWRHLAASTLRVLNGFLLAAALAIPLGVLMGRFGPVRRALETTVNLVRPIPVTAWAPL 124 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 T++ + + IF IF + + + + + +P L E + + Sbjct: 125 TLLIIGYG--------DRSTIFLIFVAAFFPILLNTTVGVAQVPPRLLEAAAMLGTPKAK 176 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + +P +M + + +++ W +V E + + G+G+ I A Sbjct: 177 TLYKIVIPSAMQSITSGLRIALGLSWVVLVVGETVGIST------GLGAMITQARDMSRT 230 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 I+ M+ + F+ D+ + Sbjct: 231 DLIIAGMVFIGLAGFVTDRFM 251 >gi|107029251|ref|YP_626346.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116687123|ref|YP_840370.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] gi|105898415|gb|ABF81373.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia AU 1054] gi|116652838|gb|ABK13477.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia HI2424] Length = 275 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 90/263 (34%), Gaps = 27/263 (10%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------- 377 + R + W V VA W + +++ Sbjct: 8 RRSSAPDTRRAGGARYPARVAAGWLGVAGLVATVAVWWAAIHLLTEPGSLGRQFAPDSAF 67 Query: 378 ----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 ++ +++ R+ V + A +I +P+G+ +G + + P Q L Sbjct: 68 ASLRALCADDQLLEHALVSLRRIGVGLGTALLIGVPLGLLLGRVRWVERMLSPTFQFLRM 127 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 + PL V + L+ F W +L + AG + + ++ +S Sbjct: 128 VSPLSWMPLAVMSFGIGDR----AIYFLLGFAALWPVLMSTAAGVTQIDRRWLQLGASLA 183 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 T +I+LP I + G A G W + +E+ GLG I ++ Sbjct: 184 ATRRELLVHIVLPAIAGPLLNGIRLAIGILWIVLVPAEMLG------VNAGLGYLILDTR 237 Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570 ++ ++ E+ ++++ L+ Sbjct: 238 DRLAYSELTAVIVVIGALGFTLD 260 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 85/249 (34%), Gaps = 20/249 (8%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETT------VPRDIVDIVPITLDVHSLPQYASR 67 R+ + V + + +H + E P + L ++A Sbjct: 26 RVAAGWLGVAGLVATVAVWWAAIHLLTEPGSLGRQFAPDSAFASLRALCADDQLLEHALV 85 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ + +LL L + R + +L P ++ + L ++ V+ F Sbjct: 86 SLRRIGVGLGTALLIGVPLGLLLGRVRWVERMLSPTFQFLRMVSPLSWMPLAVMSFGIG- 144 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 + A F + + +W + S + I R ++ S + + ++ +P Sbjct: 145 -------DRAIYFLLGFAALWPVLMSTAAGVTQIDRRWLQLGASLAATRRELLVHIVLPA 197 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 L+ + +++ W +V +EM+ V G+G I + ++ Sbjct: 198 IAGPLLNGIRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYSELTAVIVV 251 Query: 248 MLGVIFLYD 256 + + F D Sbjct: 252 IGALGFTLD 260 >gi|22124163|ref|NP_667586.1| ABC transporter permease [Yersinia pestis KIM 10] gi|45443650|ref|NP_995189.1| putative aliphatic sulfonates transport permease [Yersinia pestis biovar Microtus str. 91001] gi|51597894|ref|YP_072085.1| ABC aliphatic sulfonates transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108809630|ref|YP_653546.1| putative aliphatic sulfonates transport permease [Yersinia pestis Antiqua] gi|108813704|ref|YP_649471.1| aliphatic sulfonates transport permease protein [Yersinia pestis Nepal516] gi|145597549|ref|YP_001161625.1| aliphatic sulfonates transport permease protein [Yersinia pestis Pestoides F] gi|153997436|ref|ZP_02022536.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis CA88-4125] gi|165927575|ref|ZP_02223407.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165937418|ref|ZP_02225981.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166012001|ref|ZP_02232899.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166214137|ref|ZP_02240172.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167401992|ref|ZP_02307475.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420559|ref|ZP_02312312.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425472|ref|ZP_02317225.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218930636|ref|YP_002348511.1| putative aliphatic sulfonates transport permease [Yersinia pestis CO92] gi|229836766|ref|ZP_04456931.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Pestoides A] gi|229839334|ref|ZP_04459493.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899898|ref|ZP_04515039.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229904210|ref|ZP_04519321.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Nepal516] gi|270488648|ref|ZP_06205722.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294505225|ref|YP_003569287.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Z176003] gi|21956920|gb|AAM83837.1|AE013624_6 putative transport system permease protein of aliphatic sulfonates ABC transporter [Yersinia pestis KIM 10] gi|45438520|gb|AAS64066.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Microtus str. 91001] gi|51591176|emb|CAH22841.1| ABC aliphatic sulfonates transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108777352|gb|ABG19871.1| aliphatic sulfonates transport permease protein [Yersinia pestis Nepal516] gi|108781543|gb|ABG15601.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Antiqua] gi|115349247|emb|CAL22214.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis CO92] gi|145209245|gb|ABP38652.1| aliphatic sulfonates transport permease protein [Yersinia pestis Pestoides F] gi|149289073|gb|EDM39153.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis CA88-4125] gi|165914523|gb|EDR33137.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165920469|gb|EDR37746.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989085|gb|EDR41386.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166204624|gb|EDR49104.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166961365|gb|EDR57386.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048578|gb|EDR59986.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055486|gb|EDR65279.1| putative ABC aliphatic sulfonates transporter, permease subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229678328|gb|EEO74433.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Nepal516] gi|229687390|gb|EEO79465.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695700|gb|EEO85747.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705709|gb|EEO91718.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Pestoides A] gi|262363287|gb|ACY60008.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis D106004] gi|262367334|gb|ACY63891.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis D182038] gi|270337152|gb|EFA47929.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294355684|gb|ADE66025.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis Z176003] gi|320017213|gb|ADW00785.1| putative aliphatic sulfonates transport permease protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 265 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 17/240 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +V L Q+ + ++ R L I V + SR +L Sbjct: 40 LPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLN 99 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 + +++++P L + +++F E A IF + ++ + + Y + NI Sbjct: 100 SSVQMIRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIKNI 151 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E++RS+ LSG++ + +P ++P ++ + ++ W ++ +E I Sbjct: 152 DSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANS---- 207 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278 GIG A + ++ A++ + L D QLL R + W ++ + Sbjct: 208 --GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWLRWHPAYQQKSGEAQ 265 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 82/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIWLGCITMFRV 390 R++ + V VA+ W S + + I+ +R Sbjct: 11 HRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRA 70 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 ++ I I + +G+ G + Q++ P PLV+ Sbjct: 71 LIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGI----DES 126 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G + E+A S+ ++G+R ++LPG P + G Sbjct: 127 AKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGV 186 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 187 RFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 240 >gi|150010418|ref|YP_001305161.1| glycine betaine/L-proline transport system permease [Parabacteroides distasonis ATCC 8503] gi|237708446|ref|ZP_04538927.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 9_1_42FAA] gi|149938842|gb|ABR45539.1| glycine betaine/L-proline transport system permease [Parabacteroides distasonis ATCC 8503] gi|229457667|gb|EEO63388.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 9_1_42FAA] Length = 271 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + +T +LS+ ++LL A KS R +L P+LD MQ++P +L V+ Sbjct: 82 WEETMQTLALVLSSTCMALLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVL 141 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F G V GA IFA+ + + +P ++ E +RSF + Q + Sbjct: 142 FFGL---GTVPGAFATIIFAMP-----PVVRLTGLGIRQVPENVIEAARSFGATPRQLLF 193 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P ++ + ++ VV S MI G G+G + I + + Sbjct: 194 KVQLPLALPTILTGINQTIMMALSMVVVSAMISAG-------GLGEVVLKGITQMKIGLG 246 Query: 242 LYAMLTMLGVIFLYDQL 258 + ++ + + D++ Sbjct: 247 FEGGIAVVILAIILDRI 263 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 84/235 (35%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F V + + +AW +G + FT +L + +G T+ V+ +A Sbjct: 40 ALYAIPFYVFIPLTVLLAWWKVGKGMGAFTLLGLLLIWGMGFWEETMQTLALVLSSTCMA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I IP+GIW G + ++P + PA V+ V + + Sbjct: 100 LLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G P + E A SF T + + LP P +TG A Sbjct: 158 --AMPPVVRLTGLGIRQVPENVIEAARSFGATPRQLLFKVQLPLALPTILTGINQTIMMA 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +VS + S G GLG + + + G + + + L+R Sbjct: 216 LSMVVVSAMISAG-------GLGEVVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|307151303|ref|YP_003886687.1| binding-protein-dependent transporter inner membrane component [Cyanothece sp. PCC 7822] gi|306981531|gb|ADN13412.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7822] Length = 265 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 77/199 (38%), Gaps = 10/199 (5%) Query: 372 TYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 T + IT++RV++ II S++ +G G+ I + P Q L P+ Sbjct: 59 TLASSGELFHHIGITLYRVILGFIIGSVMGTILGALTGYSEQIHDFLDPLLQSLRNIPSL 118 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 + PL + + Y + L+ G + + N+++G + EV + ++ + Sbjct: 119 AWVPLFILWMGIYETSK----VALIAVGVFFPVYLNLMSGVKSVERKLVEVGKVYRLSNF 174 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 + R I P P Y G + G W + +E+ + GLG + + G Sbjct: 175 QLIRRIFFPATLPAYFVGLRSGLGLGWMFVVAAEIMG------SSQGLGFLLVDGQTTGR 228 Query: 552 FPEVVLGVLIMCCFVLALN 570 ++ +L+ + Sbjct: 229 PTIILASILLFALLGKLTD 247 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 106/267 (39%), Gaps = 18/267 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASR 67 P +S R + L + I++++ + P +++ + L + Sbjct: 13 PLLSVRCLKGFWLPLFLLFGWEILSLIGYFPPNLLPAPSKVIETIWTLASSGELFHHIGI 72 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R++ +I + + L S ++ L P+L +++IP L ++ +++ Sbjct: 73 TLYRVILGFIIGSVMGTILGALTGYSEQIHDFLDPLLQSLRNIPSLAWVPLFILWMGIYE 132 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 KV + F ++ ++ + ++ R L EV + +RLS +Q + P Sbjct: 133 TSKVALIAVGVFFPVY--------LNLMSGVKSVERKLVEVGKVYRLSNFQLIRRIFFPA 184 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + + GW FVVA+E++ G+G + IL ++L Sbjct: 185 TLPAYFVGLRSGLGLGWMFVVAAEIMGSSQ------GLGFLLVDGQTTGRPTIILASILL 238 Query: 248 MLGVIFLYDQLLF---RPMIVWSNKFR 271 + L D L + ++ W + ++ Sbjct: 239 FALLGKLTDAALATLGKHLLYWQDSYQ 265 >gi|323138683|ref|ZP_08073749.1| binding-protein-dependent transport systems inner membrane component [Methylocystis sp. ATCC 49242] gi|322396038|gb|EFX98573.1| binding-protein-dependent transport systems inner membrane component [Methylocystis sp. ATCC 49242] Length = 277 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 99/269 (36%), Gaps = 24/269 (8%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--------QSIGYIVNH 370 T+ +R + + ++D+ ++ GV I W + Sbjct: 6 TIVRVRSPNIAARFPTMKKRVKNILIDLSGLALLLGVWIVCGWLIERNPATAAFAGFAPV 65 Query: 371 FTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 T + + +I G ++ R+ + IA + +P+G+ +G + QL Sbjct: 66 PTLRRLFSMILDGAALAACLPSLARISGGLAIAICMGVPIGVLVGRKEVFRRATHLPFQL 125 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ + + N + L++ + W I+F+ G D+ +A Sbjct: 126 LRMVSPLAWMPIAILVFPTW----NGAIVFLIVAASIWPIIFSTAHGLKKLDPDWFRLAH 181 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + + WR +I+P +TG A G AW + +E T+GLG I Sbjct: 182 NLGASNWRILSAVIVPATAQDMLTGVRLALGVAWIVLVPAEYLG------VTSGLGYAIN 235 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ + + + V+I+ L+ L Sbjct: 236 DARDTLEYDRLAATVVIIGVIGFLLDSVL 264 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 90/260 (34%), Gaps = 22/260 (8%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--------HS 60 P + +R+ + DL L++G+ + I+ P+ + Sbjct: 20 PTMKKRVKNILIDLSGLALLLGVWIVCGWLIERNPATAAFAGFAPVPTLRRLFSMILDGA 79 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 + R+ + I++ L + +++ + L ++ + Sbjct: 80 ALAACLPSLARISGGLAIAICMGVPIGVLVGRKEVFRRATHLPFQLLRMVSPLAWMPIAI 139 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + F A +F I + +W + FS L + D ++ + S W+ Sbjct: 140 LVFPTWNG--------AIVFLIVAASIWPIIFSTAHGLKKLDPDWFRLAHNLGASNWRIL 191 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + VP + ++ + +++ W +V +E + V G+G I A + Sbjct: 192 SAVIVPATAQDMLTGVRLALGVAWIVLVPAEYLGV------TSGLGYAINDARDTLEYDR 245 Query: 241 ILYAMLTMLGVIFLYDQLLF 260 + ++ + + FL D +L Sbjct: 246 LAATVVIIGVIGFLLDSVLL 265 >gi|257870168|ref|ZP_05649821.1| glycine betaine/L-proline ABC transporter [Enterococcus gallinarum EG2] gi|257804332|gb|EEV33154.1| glycine betaine/L-proline ABC transporter [Enterococcus gallinarum EG2] Length = 575 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 15/200 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L T +L + ++S++ L AKS + ++ PILD MQ++P +L Sbjct: 88 QGLWTDLMNTVTLVLLSSLVSIIIGIPLGILMAKSEKAQSIVTPILDFMQTMPGFVYLIP 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA + + I R+L E S SF +GWQ Sbjct: 148 AVAFFG---IGMVPGVFASVIFA-----LPPTVRMTNLGIRQISRELVEASDSFGGTGWQ 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 200 KLVKLELPLAKSTILAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 252 Query: 239 LAILYAMLTMLGVIFLYDQL 258 + ++++ + + D+ Sbjct: 253 GNGFVSGVSLVILAIIMDRF 272 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 86/275 (31%), Gaps = 13/275 (4%) Query: 298 IGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 + +F L+ L L + +M+ + + Sbjct: 11 VADWVESFTDWLTGTFSGLFSALQSFGQFVMDGMTNTLLFVPPLFMILLLTIAAFFVSSK 70 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + ++ F Y L+ + +T+ V++ +++ II IP+GI + S Sbjct: 71 KWGLTAFTFVGLLFIYNQGLWTDLMNTVTL--VLLSSLVSIIIGIPLGILMAKSEKAQSI 128 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P + P V+ V+ + + + G Sbjct: 129 VTPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIF----ALPPTVRMTNLGIRQISR 184 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 + E + SF TGW+ + LP + G A + +++ + Sbjct: 185 ELVEASDSFGGTGWQKLVKLELPLAKSTILAGVNQTTMLALSMVVIASMIG-------AP 237 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + ++ + + + + ++RF Sbjct: 238 GLGRGVLSALQRAQVGNGFVSGVSLVILAIIMDRF 272 >gi|282900985|ref|ZP_06308918.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] gi|281194076|gb|EFA69040.1| Nitrate transport permease [Cylindrospermopsis raciborskii CS-505] Length = 247 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 92/246 (37%), Gaps = 14/246 (5%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGV----AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITM 387 + + R + I W+ + + + + + V D + ++ Sbjct: 1 MTIPLPLRGLVIGSILWWVLTTPLWHQDPVVVDFSPERTSVALVQLLDSGAIFPHIFASL 60 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 RV V ++ A + +P GI +G ++ Q + + P+ V + L Sbjct: 61 RRVFVGLLAAIGLGVPCGILLGLSRYLDQATSALFQFIRMISPLSWMPIAVMVLGIGDL- 119 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + L+ W ++ N AG + + ++ T W +I+P I P+ + Sbjct: 120 ---PVYFLLTIAAIWALILNTSAGVVSVDRRWLLLSKGLCATQWEMISQVIIPAIIPHLL 176 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 TG A G W + +E+ GLG YI + ++ ++ E++ VLI+ Sbjct: 177 TGIRLAIGVIWIVLVPAEMLG------VNEGLGYYILNTRDRLAYSELMAVVLIIGLIGC 230 Query: 568 ALNRFL 573 L+ L Sbjct: 231 FLDITL 236 Score = 95.4 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 77/204 (37%), Gaps = 14/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 LD ++ + + R+ ++ ++ L SR L + ++ I L + Sbjct: 47 LDSGAIFPHIFASLRRVFVGLLAAIGLGVPCGILLGLSRYLDQATSALFQFIRMISPLSW 106 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + V+ +L F + + +W + + + ++ R +S+ + Sbjct: 107 MPIAVMVLGIG--------DLPVYFLLTIAAIWALILNTSAGVVSVDRRWLLLSKGLCAT 158 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 W+ + +P +P L+ + +++ W +V +EM+ V + G+G YI Sbjct: 159 QWEMISQVIIPAIIPHLLTGIRLAIGVIWIVLVPAEMLGVNE------GLGYYILNTRDR 212 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 ++ +L + + D L Sbjct: 213 LAYSELMAVVLIIGLIGCFLDITL 236 >gi|134300613|ref|YP_001114109.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] gi|134053313|gb|ABO51284.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] Length = 252 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 ++ F ++ ++++RV++ ++ A+++ +P+GI++G P + K P L Sbjct: 44 LHSFLISLRGELLSHLGVSLYRVLLSLLSATLLAVPLGIFLGKNPEVDRKAAPLLYLTYP 103 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P VF P+ + + + LL+ T + IL A ++ S Sbjct: 104 IPKVVFMPIFLIILGIGDSSK----ILLITLITFYQILVTTRDAAKNMAKEYIFSLKSLG 159 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + W +R++ LPG P +T G A ++E + TG+G +I +S Sbjct: 160 ASSWDLYRHVYLPGCLPAILTALRLGLGTAMAVLFLAE------TYATQTGIGFFIMDSL 213 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573 + ++ E+ G++ M L L Sbjct: 214 SRMNYEEMFAGIIAMGLMGFFLYILL 239 Score = 91.9 bits (227), Expect = 3e-16, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 79/217 (36%), Gaps = 15/217 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 +P D + I+L L + + R+L +++ + L K+ + P Sbjct: 38 PLPLDALHSFLISL-RGELLSHLGVSLYRVLLSLLSATLLAVPLGIFLGKNPEVDRKAAP 96 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 +L + IP + F+ ++ K I I + + + + N+ Sbjct: 97 LLYLTYPIPKVVFMPIFLIILGIGDSSK--------ILLITLITFYQILVTTRDAAKNMA 148 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 ++ +S S W + ++ +P +P ++ + + + + +E T Sbjct: 149 KEYIFSLKSLGASSWDLYRHVYLPGCLPAILTALRLGLGTAMAVLFLAE------TYATQ 202 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 GIG +I ++ + + ++ M + F LL Sbjct: 203 TGIGFFIMDSLSRMNYEEMFAGIIAMGLMGFFLYILL 239 >gi|330998254|ref|ZP_08322079.1| glycine betaine transport system permease protein opuAB [Paraprevotella xylaniphila YIT 11841] gi|329568643|gb|EGG50444.1| glycine betaine transport system permease protein opuAB [Paraprevotella xylaniphila YIT 11841] Length = 271 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + +T +LS+ ++LL A KS R +L P+LD MQ++P +L V+ Sbjct: 82 WEETMQTLALVLSSTCMALLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVL 141 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F G V GA IFA+ + + +P+++ E +RSF + Q + Sbjct: 142 FFGL---GTVPGAFATIIFAMP-----PVVRLTGLGIRQVPKNVIEAARSFGATPRQLLF 193 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + + ++ VV S MI G G+G + I + + Sbjct: 194 KVQLPLALPTIQTGINQTIMMALSMVVVSAMISAG-------GLGEVVLKGITQMKIGLG 246 Query: 242 LYAMLTMLGVIFLYDQL 258 + ++ + + D++ Sbjct: 247 FEGGIAVVILAIILDRI 263 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 83/235 (35%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F V + + +AW +G + FT +L + +G T+ V+ +A Sbjct: 40 ALYAIPFYVFIPLTVSLAWWKVGKGMGVFTLLGLLLIWGMGFWEETMQTLALVLSSTCMA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I IP+GIW G + ++P + PA V+ V + + Sbjct: 100 LLIGIPLGIWAGKSERCNRMLRPVLDCMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G P + E A SF T + + LP P TG A Sbjct: 158 --AMPPVVRLTGLGIRQVPKNVIEAARSFGATPRQLLFKVQLPLALPTIQTGINQTIMMA 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +VS + S G GLG + + + G + + + L+R Sbjct: 216 LSMVVVSAMISAG-------GLGEVVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|316935677|ref|YP_004110659.1| binding-protein-dependent transporter inner membrane component [Rhodopseudomonas palustris DX-1] gi|315603391|gb|ADU45926.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris DX-1] Length = 277 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV V + A ++ + +G+ G+ +S ++P + L P + P+ + Sbjct: 82 GASLQRVAVGFLFACVVGLALGLLCGWWRTVSDYVRPVIEALRPIPPLAWIPITILWFGL 141 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ G + + + A W+ + +++P Sbjct: 142 GDA----ASYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTDVLIPASL 197 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W + +E+ + TGLG I +S VV G++ + Sbjct: 198 PIILPGLRIALGVGWMCVVTAELIA------AQTGLGYLIQQSRMLFQINNVVAGMVTIG 251 Query: 564 CFVLALNRFL 573 A++ L Sbjct: 252 LIGFAMSAIL 261 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 15/259 (5%) Query: 4 YNILPPFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLP 62 Y ++ + R L AF ++ I L L P I + + SL Sbjct: 19 YAMIQDIFAGRPMRAAVGLTAFFVIWQAITQLNLVDGFLLPSPVAIAEALWDLALDGSLW 78 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 + + R+ + + + L R + + P+++ ++ IP L ++ T+++ Sbjct: 79 VHLGASLQRVAVGFLFACVVGLALGLLCGWWRTVSDYVRPVIEALRPIPPLAWIPITILW 138 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + A+ F +F V+ + + Y ++ + R+ + WQ F Sbjct: 139 FGLG--------DAASYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTD 190 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P S+P ++ + +++ GW VV +E+I G+G I + + ++ Sbjct: 191 VLIPASLPIILPGLRIALGVGWMCVVTAELIAAQT------GLGYLIQQSRMLFQINNVV 244 Query: 243 YAMLTMLGVIFLYDQLLFR 261 M+T+ + F +L R Sbjct: 245 AGMVTIGLIGFAMSAILER 263 >gi|218531725|ref|YP_002422541.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|218524028|gb|ACK84613.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 285 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 91/266 (34%), Gaps = 16/266 (6%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 V I F + L + L WF + A+ + Sbjct: 14 REVAAPAPRRAGIGARFGASALDRLAPLLGLAGLLALWFAGGLVLESVPAYAAFAGFAPG 73 Query: 371 FTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + ++ G ++ R+ + +A + P+G+ IG P +QP QL Sbjct: 74 PALASFVELLTSGEAWRAAAPSLARIGQGLAVAFGLGAPLGLLIGSVPLAERILQPPFQL 133 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ V + + L+ W ILF AG + +A Sbjct: 134 LRMISPLAWMPVAVLAFPSWDG----AIVFLIAAAAIWPILFATAAGVKRVDPVWLAMAR 189 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + R +I+P + +TG A G AW + +E T+GLG I Sbjct: 190 NLGAGRLAALRAVIVPAVLQDILTGLRLALGVAWIVLVPAEYLG------VTSGLGYAIN 243 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 ++ + S+ + VL++ AL+ Sbjct: 244 DARDTLSYDRLAALVLLIGLIGYALD 269 Score = 95.0 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 80/238 (33%), Gaps = 14/238 (5%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F + + ++ + P + L + A+ + R+ + ++ Sbjct: 51 WFAGGLVLESVPAYAAFAGFAPGPALASFVELLTSGEAWRAAAPSLARIGQGLAVAFGLG 110 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L +L P +++ I L ++ V+ F + A +F I Sbjct: 111 APLGLLIGSVPLAERILQPPFQLLRMISPLAWMPVAVLAF--------PSWDGAIVFLIA 162 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + +W + F+ + + ++R+ + VP + ++ + +++ Sbjct: 163 AAAIWPILFATAAGVKRVDPVWLAMARNLGAGRLAALRAVIVPAVLQDILTGLRLALGVA 222 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 W +V +E + V G+G I A + +L + + + D L R Sbjct: 223 WIVLVPAEYLGV------TSGLGYAINDARDTLSYDRLAALVLLIGLIGYALDTGLGR 274 >gi|332687053|ref|YP_004456827.1| glycine betaine ABC transporter permease OpuAB/ glycine betaine ABC transporter glycine betaine-binding protein OpuAC [Melissococcus plutonius ATCC 35311] gi|332371062|dbj|BAK22018.1| glycine betaine ABC transport system, permease protein OpuAB/ glycine betaine ABC transport system, glycine betaine-binding protein OpuAC [Melissococcus plutonius ATCC 35311] Length = 293 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 15/201 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L T +L + IS++ L AK ++ ++ PILD MQ++P +L Sbjct: 85 QNLWPDLMDTLTLVLVSSFISIVIGVPLGILMAKYNKVQTIITPILDFMQTMPGFVYLIP 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V +F G V G + IFA+ + + + +P++L E S SF + WQ Sbjct: 145 AVAFFG---IGIVPGVFASIIFALPPTVRF-----TNLGIRQVPKELVEASDSFGSTNWQ 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 K + L +P + ++ + + VV + MI PG+G + A++ + Sbjct: 197 KLFKLELPLAKSTIMAGVNQTTMLALSMVVIASMI-------GAPGLGRGVLSALQRAQV 249 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 + ++ + + D+ + Sbjct: 250 GNGFVNGVALVILAIIIDRFV 270 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 13/231 (5%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 + + +I F Y L+ + +T+ V+V I+ +I + Sbjct: 53 FIVLLTIAAFIVSKKKFGLSLFTFIGLLFIYNQNLWPDLMDTLTL--VLVSSFISIVIGV 110 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GI + + + I P + P V+ V+ + + Sbjct: 111 PLGILMAKYNKVQTIITPILDFMQTMPGFVYLIPAVAFFGIGIVPGVFASIIF----ALP 166 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G P + E + SF T W+ + LP + G A + + Sbjct: 167 PTVRFTNLGIRQVPKELVEASDSFGSTNWQKLFKLELPLAKSTIMAGVNQTTMLALSMVV 226 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ + GLG + + ++ + + + + ++RF+ Sbjct: 227 IASMIG-------APGLGRGVLSALQRAQVGNGFVNGVALVILAIIIDRFV 270 >gi|300718729|ref|YP_003743532.1| taurine ABC transporter permease [Erwinia billingiae Eb661] gi|299064565|emb|CAX61685.1| Taurine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 275 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +R +P S + +L I+W + + Q ++ + Q Sbjct: 12 RRVRLRWPFGRQITLSAATLLVILAIWWGVTALKLIAPLFLPAPQQVFHQLLTIASSQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+++ + A II +PVGI +G + P +L P + Sbjct: 72 MDATLWQHLAASLTRILIALFAAVIIGVPVGILMGLSATARGILDPLIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S W+ Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGGNRWQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIALIAFTLELGLRALQRRLTPW 270 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 101/254 (39%), Gaps = 22/254 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76 L+ + G+ + L P+ + + +L Q+ + + R+L A+ Sbjct: 32 LVILAIWWGVTALKLIAPLFLPAPQQVFHQLLTIASSQGFMDATLWQHLAASLTRILIAL 91 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 +++ L S +L P++++ + +P L +L V++F E Sbjct: 92 FAAVIIGVPVGILMGLSATARGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ET 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + I I+ + + S + + + ++S + WQ W++ +P ++P ++ + Sbjct: 144 SKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGGNRWQVLWFVILPGALPEILTGL 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + + GW +VA+E+I G+G + A + +L + + + F + Sbjct: 204 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIALIAFTLE 257 Query: 257 ---QLLFRPMIVWS 267 + L R + W Sbjct: 258 LGLRALQRRLTPWH 271 >gi|193212850|ref|YP_001998803.1| binding-protein-dependent transport systems inner membrane component [Chlorobaculum parvum NCIB 8327] gi|193086327|gb|ACF11603.1| binding-protein-dependent transport systems inner membrane component [Chlorobaculum parvum NCIB 8327] Length = 263 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 80/194 (41%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +I ++ RV+ +++A I+ +P+G+ +G+ + Q + + P+ Sbjct: 66 GELIHHAIPSIRRVLTSLLLAIIVALPIGVLVGYFKRVEQLTYVVFQFMRMISPLAWMPI 125 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + ++ ++ L+ W ++ N GA + ++ + R Sbjct: 126 AIIIFGVGDVS----VTFLLWLVAIWPLILNTSHGAGRVSPLWVNMSRTMGAKDTGILRK 181 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +I+P P +TG A G +W + +E+ GLG +I ++ ++ + +++ Sbjct: 182 VIIPAAVPDMLTGLRLAVGVSWIILVPAEMLGVPD------GLGYFILDTRDRFRYDQLM 235 Query: 557 LGVLIMCCFVLALN 570 ++++ L+ Sbjct: 236 ATIMVIGAIGYLLD 249 Score = 106 bits (266), Expect = 8e-21, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 93/239 (38%), Gaps = 17/239 (7%) Query: 21 DLLAFVLVIGIINIL---LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 +L F+ V + ++ ++ P + + L +A + R+L++++ Sbjct: 25 GILLFLAVWQLASMFKLFGADFSDSFSPVAAFSALFEMIKSGELIHHAIPSIRRVLTSLL 84 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++++ L +R+ + + M+ I L ++ ++ F +++ Sbjct: 85 LAIIVALPIGVLVGYFKRVEQLTYVVFQFMRMISPLAWMPIAIIIFGVG--------DVS 136 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 F ++ +W + + + +SR+ + +P ++P ++ + Sbjct: 137 VTFLLWLVAIWPLILNTSHGAGRVSPLWVNMSRTMGAKDTGILRKVIIPAAVPDMLTGLR 196 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 +++ W +V +EM+ V D G+G +I ++ ++ + + +L D Sbjct: 197 LAVGVSWIILVPAEMLGVPD------GLGYFILDTRDRFRYDQLMATIMVIGAIGYLLD 249 >gi|319788744|ref|YP_004090059.1| binding-protein-dependent transport systems inner membrane component [Ruminococcus albus 7] gi|315450611|gb|ADU24173.1| binding-protein-dependent transport systems inner membrane component [Ruminococcus albus 7] Length = 253 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M+R V ++ + +G+ +G P + + P QLL + P +V Sbjct: 61 SMYRFAVGYSVSVATAVVLGLILGRIPRVFQYVNPALQLLRPISPTAWMPFIVLLFGIG- 119 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ +++ + +L + ++ + +V+ +F I II P FP Sbjct: 120 ---DVPAIVIIFIAAFFPVLLSTVSAVGNIDPIYFKVSKNFGIKQPALTWKIIFPAAFPQ 176 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G A G AW + E+ +GLG I ++ ++ +L++ Sbjct: 177 IANGIHLALGTAWIFLVAGEMVG------AQSGLGYQIIDARNNIRADILLATILVIGVI 230 Query: 566 VLALNRFL 573 + L+ L Sbjct: 231 GILLDGIL 238 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 93/242 (38%), Gaps = 15/242 (6%) Query: 19 IFDLLAFVLVIGII-NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 + + +L+ ++ + + P+ D + + L + + R Sbjct: 11 VISIAILILIWQLLFTVSSYNEALFPSPKMAFDALVEMIQNGRLFENIKTSMYRFAVGYS 70 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +S+ V + + R+ + P L +++ I ++ F V+ F ++ Sbjct: 71 VSVATAVVLGLILGRIPRVFQYVNPALQLLRPISPTAWMPFIVLLFGIG--------DVP 122 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 AI IF + + + S ++ NI +VS++F + W + P + P + + Sbjct: 123 AIVIIFIAAFFPVLLSTVSAVGNIDPIYFKVSKNFGIKQPALTWKIIFPAAFPQIANGIH 182 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +++ W F+VA EM+ G+G I A +L +L + + L D Sbjct: 183 LALGTAWIFLVAGEMVG------AQSGLGYQIIDARNNIRADILLATILVIGVIGILLDG 236 Query: 258 LL 259 +L Sbjct: 237 IL 238 >gi|145297975|ref|YP_001140816.1| glycine betaine/L-proline transport system permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850747|gb|ABO89068.1| glycine betaine/L-proline transport system permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 383 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 16/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L++G++ ++ + + + + + + + A T +L+++ +L Sbjct: 127 LMMGMLALIAWQMVNGRMALGTL-LSLVGIGLIGAWSDAMVTLSLVLNSLFFCILIGLPV 185 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 + A+S RL P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 186 GIMLARSERLSTWTRPLLDAMQTTPAFVYLIPIVMLFG---IGNVPGVVVTVIFA----- 237 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + M + +P DL E + SF S Q + + +P +MP ++ + ++ Sbjct: 238 LPPMIRLTMLGIRQVPEDLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALSM 297 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + + D+L Sbjct: 298 VVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAIVLDRL 342 Score = 91.1 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 102/285 (35%), Gaps = 22/285 (7%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + + S + V+ L +IR + ++++L ++ Sbjct: 75 PFQQALVPLDVWVESGIGWLVENLRPVFQLIRAPV------EVTLNAMTHLLQTVPSTLM 128 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIW 407 G+ IAWQ + + T ++ + +G +T+ V+ + +I +PVGI Sbjct: 129 MGMLALIAWQMVNGRMALGTLLSLVGIGLIGAWSDAMVTLSLVLNSLFFCILIGLPVGIM 188 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 + +S+ +P + PA V+ +V ++ + + ++ Sbjct: 189 LARSERLSTWTRPLLDAMQTTPAFVYLIPIVMLFGIGNVPGVVVTVIF----ALPPMIRL 244 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 + G P D E A SF + + + LP P + G A + +++ + Sbjct: 245 TMLGIRQVPEDLVEAAHSFGASPSQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMI 304 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + + +G L + + L+R Sbjct: 305 AVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAIVLDRL 342 >gi|88801194|ref|ZP_01116736.1| ABC-type proline/glycine betaine transport system, permease component [Reinekea sp. MED297] gi|88776068|gb|EAR07301.1| ABC-type proline/glycine betaine transport system, permease component [Reinekea sp. MED297] Length = 357 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 99/239 (41%), Gaps = 16/239 (6%) Query: 20 FDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 F+ + ++++ ++ +L + V + L + + T ++++++ Sbjct: 103 FNAVPPLMMVALLGLLAWQLSGRKVGI-WTVVGMFVLGAVGAWEESMTTLSLVVTSVLFC 161 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 ++ A+S R ++ P+LD MQ+ P +L V+ F G V G + I Sbjct: 162 MVIGIPTGIGMARSDRAARIMRPVLDTMQTTPAFVYLVPVVMLFG---IGNVPGVVVTII 218 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 FA+ + + +P DL E + SF Q + + +P +MP ++ + + Sbjct: 219 FAVP-----PVIRLTNLGIRQVPEDLIEAANSFGADSKQMLFKVQLPLAMPTIMAGVNQT 273 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + G VV + MI VG G+G + I D+ + ++ + + D++ Sbjct: 274 LMLGLSMVVIASMISVG-------GLGLMVLRGIGRLDIGLATVGGIGIVILAIILDRM 325 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 75/228 (32%), Gaps = 19/228 (8%) Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI--------TMFRVVVLIIIASIIWIPV 404 + + + V+ + LG + T+ VV ++ +I IP Sbjct: 109 LMMVALLGLLAWQLSGRKVGIWTVVGMFVLGAVGAWEESMTTLSLVVTSVLFCMVIGIPT 168 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GI + + ++P + PA V+ VV N+ ++ I + Sbjct: 169 GIGMARSDRAARIMRPVLDTMQTTPAFVYLVPVVMLFGIG----NVPGVVVTIIFAVPPV 224 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G P D E A+SF + + LP P + G + +++ Sbjct: 225 IRLTNLGIRQVPEDLIEAANSFGADSKQMLFKVQLPLAMPTIMAGVNQTLMLGLSMVVIA 284 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + S G GLG + + +G + + + L+R Sbjct: 285 SMISVG-------GLGLMVLRGIGRLDIGLATVGGIGIVILAIILDRM 325 >gi|260869357|ref|YP_003235759.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O111:H- str. 11128] gi|257765713|dbj|BAI37208.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O111:H- str. 11128] gi|323180099|gb|EFZ65651.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 1180] Length = 354 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I +D A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIDAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 87.7 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 F QL + +F +G+ ++ ++ + + V Sbjct: 97 FQQLLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIDAIGAWSQAMVTLAL----V 152 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + ++ +I +P+GIW+ P + I+P + PA V+ +V N+ Sbjct: 153 LTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NV 208 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 ++ I I+ I G + P D E + SF + + + LP P + G Sbjct: 209 PGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGV 268 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A + +++ + + G GLG + + +G + + + L+ Sbjct: 269 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILD 321 Query: 571 RF 572 R Sbjct: 322 RL 323 >gi|283834315|ref|ZP_06354056.1| taurine uptake ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291069845|gb|EFE07954.1| taurine uptake ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 276 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 102/273 (37%), Gaps = 19/273 (6%) Query: 317 CRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFT 372 R + +P + S ++ +L ++W + + Q + ++ Sbjct: 9 PRRPRAQYWRWPFSRQITLSLGTLAVILALWWMVAALQLISPLFLPPPGQVLQKLLTIAG 68 Query: 373 YQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 Q + ++ R+VV ++ A ++ IPVGI +G P I + P +L P Sbjct: 69 PQGFMDATLWQHLAASLTRIVVALLAAVLLGIPVGIAMGLSPTIRGILDPIIELYRPVPP 128 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + PL+V + LL+ + + +AG + A S + Sbjct: 129 LAYLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASR 184 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + ++ILPG P +TG G W+ + +E+ + T GLG + + E Sbjct: 185 AQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFL 238 Query: 551 SFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + V+ G+ ++ L R L L + Sbjct: 239 ATDVVLAGIAVIAVIAFILELGLRALQRRLTPW 271 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 101/253 (39%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77 + L + + L P ++ + P +L Q+ + + R++ A++ Sbjct: 34 VILALWWMVAALQLISPLFLPPPGQVLQKLLTIAGPQGFMDATLWQHLAASLTRIVVALL 93 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++L S + +L PI+++ + +P L +L V++F E + Sbjct: 94 AAVLLGIPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 145 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + + S + + + ++S S Q W++ +P ++P ++ + Sbjct: 146 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 205 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 + + GW +VA+E+I G+G + A + +L + + + F+ + Sbjct: 206 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAVIAFILEL 259 Query: 257 --QLLFRPMIVWS 267 + L R + W Sbjct: 260 GLRALQRRLTPWH 272 >gi|30262879|ref|NP_845256.1| sulfonate ABC transporter, permease protein, putative [Bacillus anthracis str. Ames] gi|47528213|ref|YP_019562.1| sulfonate ABC transporter permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49185718|ref|YP_028970.1| sulfonate ABC transporter permease [Bacillus anthracis str. Sterne] gi|65320194|ref|ZP_00393153.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Bacillus anthracis str. A2012] gi|165868596|ref|ZP_02213256.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167631771|ref|ZP_02390098.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167637819|ref|ZP_02396098.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170685175|ref|ZP_02876399.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170704724|ref|ZP_02895190.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177649373|ref|ZP_02932375.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190565673|ref|ZP_03018593.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196032678|ref|ZP_03100092.1| putative sulfonate ABC transporter, permease protein [Bacillus cereus W] gi|227814276|ref|YP_002814285.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228927963|ref|ZP_04091008.1| aliphatic sulfonates transport permease protein ssuC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229604457|ref|YP_002867170.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254685477|ref|ZP_05149337.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254722884|ref|ZP_05184672.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254737934|ref|ZP_05195637.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254742893|ref|ZP_05200578.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254752248|ref|ZP_05204285.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254760765|ref|ZP_05212789.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|30257512|gb|AAP26742.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47503361|gb|AAT32037.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49179645|gb|AAT55021.1| sulfonate ABC transporter, permease protein, putative [Bacillus anthracis str. Sterne] gi|164715322|gb|EDR20839.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167514368|gb|EDR89735.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167532069|gb|EDR94705.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170130525|gb|EDS99386.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170670535|gb|EDT21274.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172084447|gb|EDT69505.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190563700|gb|EDV17665.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|195995429|gb|EDX59383.1| putative sulfonate ABC transporter, permease protein [Bacillus cereus W] gi|227006521|gb|ACP16264.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228831653|gb|EEM77245.1| aliphatic sulfonates transport permease protein ssuC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229268865|gb|ACQ50502.1| putative sulfonate ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 282 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I++FR I + I +G +GF + P Q+L P PL Sbjct: 76 GELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + + LL+ G + + N G + +VA + + Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILP P + GA + G AW + +V+E+ T G+G I ++ + + V Sbjct: 192 LILPATLPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245 Query: 557 LGVLIMCCFVLALNRFL 573 +G++I + + Sbjct: 246 VGIIIFAFVGKFSDSLV 262 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 17/236 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P DI + L + S + R + I + T+ S R L Sbjct: 59 LPTPLDIFVAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + +++++P L V++F KV+ A F + + + + + Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L +V+R S + L +P ++P L+ +S+ W +V +E++ Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPATLPNLLLGARLSLGVAWVSLVVAELMG------S 224 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274 GIG I A + + + ++ V D +LL + W + F+ E Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDGFKGET 280 >gi|282897797|ref|ZP_06305794.1| Nitrate transport permease [Raphidiopsis brookii D9] gi|281197281|gb|EFA72180.1| Nitrate transport permease [Raphidiopsis brookii D9] Length = 265 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 10/207 (4%) Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 IV+ F + + ++ RV+V ++IA + +P+GI++G + QL+ Sbjct: 58 IVSLFQLFNSHSIFPHIFASLRRVLVGLLIAISLGVPMGIFLGMYRSLDLATSVLFQLVR 117 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 + P+ V + L + L+ W ++ N AG +A + ++ S Sbjct: 118 MISPLSWMPIAVMVLGIGDL----PVYFLLSISAIWAVILNTSAGVTAVDTQWLLLSKSL 173 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 T W +I+P I P+ +TG A G W + +E+ GLG +I ++ Sbjct: 174 CATKWETISQVIIPAIIPHLLTGIRLAMGVIWIVLVPAEMLG------VNAGLGYFILDT 227 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFL 573 ++ ++ E+ ++I+ L+ L Sbjct: 228 RDRLAYSELAAVIVIIGLIGYFLDAVL 254 Score = 90.0 bits (222), Expect = 1e-15, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 78/204 (38%), Gaps = 14/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + HS+ + + R+L ++I++ R L + + +++ I L + Sbjct: 65 FNSHSIFPHIFASLRRVLVGLLIAISLGVPMGIFLGMYRSLDLATSVLFQLVRMISPLSW 124 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + V+ +L F + S +W + + + + +S+S + Sbjct: 125 MPIAVMVLGIG--------DLPVYFLLSISAIWAVILNTSAGVTAVDTQWLLLSKSLCAT 176 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 W+ + +P +P L+ + ++M W +V +EM+ V G+G +I Sbjct: 177 KWETISQVIIPAIIPHLLTGIRLAMGVIWIVLVPAEMLGVNA------GLGYFILDTRDR 230 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + ++ + + + D +L Sbjct: 231 LAYSELAAVIVIIGLIGYFLDAVL 254 >gi|254691563|ref|ZP_05154817.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 6 str. 870] gi|256256749|ref|ZP_05462285.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 9 str. C68] gi|260757191|ref|ZP_05869539.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 6 str. 870] gi|260882998|ref|ZP_05894612.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|297250105|ref|ZP_06933806.1| ABC transporter permease [Brucella abortus bv. 5 str. B3196] gi|260677299|gb|EEX64120.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 6 str. 870] gi|260872526|gb|EEX79595.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|297173974|gb|EFH33338.1| ABC transporter permease [Brucella abortus bv. 5 str. B3196] Length = 250 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 84/247 (34%), Gaps = 13/247 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +S+ + I + ++ + + + T ++ ++ RV+ ++ Sbjct: 13 LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVG +G S I+P+ Q P PL + + ++ Sbjct: 73 LAIPVGFLMGRYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + G + A + +I+P P+ + G G AW Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576 + +E+ + +GLG + ++ P + + ++ + L ++R L Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242 Query: 577 LYLYGTR 583 L + R Sbjct: 243 LTQWQER 249 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 92/245 (37%), Gaps = 17/245 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + G + G P D+++ L L + R+LS V+ + Sbjct: 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L + R ++ P + + IP L + +V E IF IF + Sbjct: 79 FLMGRYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + YQ + ++ R L +R F + VP S+P ++ + + + W V Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264 VA+E+I G+G + A DL I +++T+ + D+LL R + Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244 Query: 265 VWSNK 269 W + Sbjct: 245 QWQER 249 >gi|26986974|ref|NP_742399.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida KT2440] gi|24981588|gb|AAN65863.1|AE016214_8 taurine ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 279 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 104/281 (37%), Gaps = 21/281 (7%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI 367 P++ R +R ++ + ++ +L ++W G + S G I Sbjct: 7 PVAGKHNTQIRPAATLRRPLSTRWISTLT---LASLLMVWWLVTAAGWVEPLFLPSPGDI 63 Query: 368 VNH----FTYQDVLYVIWLGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + T + +W ++ R+ + ++ A++ IPVGI IG+ + P Sbjct: 64 LAKAWTLLTQGYMDASLWQHLSASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLI 123 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 + P + PL+V L+ LL+ I G Sbjct: 124 EFYRPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRA 179 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A S T + R++ILP P +TG G W+ + +E+ + T+GLG Sbjct: 180 AQSLGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFM 233 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + + + VVLG+L++ AL R L L + Sbjct: 234 VQSAAQFLVTDVVVLGILLIALIAFALEMSLRALQRKLVPW 274 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 104/274 (37%), Gaps = 26/274 (9%) Query: 6 ILPPFISRRIFPNIF----DLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVH- 59 I P RR + L + ++V ++ P DI+ L Sbjct: 16 IRPAATLRRPLSTRWISTLTLASLLMVWWLVTAAGWVEPLFLPSPGDILAKAWTLLTQGY 75 Query: 60 ---SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 SL Q+ S + R+ A+V + L +R +L P+++ + IP L +L Sbjct: 76 MDASLWQHLSASLGRIGLALVAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYL 135 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 V++ EL+ + I+ + + + + + ++S + Sbjct: 136 PLIVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATK 187 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 Q ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 188 AQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFL 241 Query: 237 DLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 242 VTDVVVLGILLIALIAFALEMSLRALQRKLVPWH 275 >gi|254228316|ref|ZP_04921743.1| ABC transporter, permease protein [Vibrio sp. Ex25] gi|262394381|ref|YP_003286235.1| L-proline glycine betaine ABC transport system permease proW [Vibrio sp. Ex25] gi|151939122|gb|EDN57953.1| ABC transporter, permease protein [Vibrio sp. Ex25] gi|262337975|gb|ACY51770.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio sp. Ex25] Length = 363 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T +L+A+ LL A+S+ + PILD MQ+ P +L V+ F Sbjct: 141 AMTTLALVLTAVFFCLLIGLPMGIWLARSQTAAKFVRPILDAMQTTPAFVYLVPIVMLFG 200 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA + + + +P +L E SF + Q + + Sbjct: 201 ---IGNVPGVVVTIIFA-----LPPVVRLTILGIQQVPEELIEAGHSFGANKKQMLYRIQ 252 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ VV + MI VG G+G + I D+ Sbjct: 253 LPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVG 305 Query: 245 MLTMLGVIFLYDQL 258 L ++ + L D++ Sbjct: 306 GLGIVILAILLDRI 319 Score = 87.3 bits (215), Expect = 7e-15, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 12/280 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + S L+ V+ IR + + + + Sbjct: 52 PFQDAVLPLDSWVESGLNWLVEHGRPVFQAIRVPIDFILTSFETALVSTPAPIMVLILFL 111 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 +V + ++ T+ V+ + +I +P+GIW+ Sbjct: 112 LAWQFSNVKLGFSTLV-SLVFIGLIGAWSQAMTTLALVLTAVFFCLLIGLPMGIWLARSQ 170 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + ++P + PA V+ +V N+ ++ I ++ I G Sbjct: 171 TAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILGI 226 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P + E SF + I LP P + G + + +++ + + G Sbjct: 227 QQVPEELIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG-- 284 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 285 -----GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 319 >gi|169795525|ref|YP_001713318.1| putative binding-protein-dependent transport systems inner membrane component [Acinetobacter baumannii AYE] gi|215483012|ref|YP_002325217.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB307-0294] gi|301344982|ref|ZP_07225723.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB056] gi|301513508|ref|ZP_07238745.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB058] gi|301597423|ref|ZP_07242431.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB059] gi|332850711|ref|ZP_08432958.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013150] gi|332866988|ref|ZP_08437305.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013113] gi|169148452|emb|CAM86318.1| putative binding-protein-dependent transport systems inner membrane component [Acinetobacter baumannii AYE] gi|213986297|gb|ACJ56596.1| Putative aliphatic sulfonates transport permease protein ssuC [Acinetobacter baumannii AB307-0294] gi|332730548|gb|EGJ61864.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013150] gi|332734317|gb|EGJ65445.1| putative aliphatic sulfonates transport permease protein SsuC [Acinetobacter baumannii 6013113] Length = 279 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + L L + +T R+L +I ++A S+ L P ++SIP L Sbjct: 72 LDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 131 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 ++ +++ K+ + A F +T + ++ N+ + L EV + +R Sbjct: 132 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDKKLIEVGKVYR 183 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ +Q+ + +P + PG++ + S+S W F++A+E+I GIG ++ Sbjct: 184 LNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGR 237 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + ++ A++ + + + D L+ + + W ++R Sbjct: 238 ETSRPDIVIIAIILLALLGKITDTLM-KLIENWLLRWR 274 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I+ +RV+ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 79 LFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 138 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + L+ G + N +A EV + + ++ II Sbjct: 139 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRIISII 194 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 LP P +TG + +W I +E+ + T G+G +++ E Sbjct: 195 LPAASPGILTGLRNSLSLSWMFMIAAELIA------ATQGIGYLLSDGRE 238 >gi|157147033|ref|YP_001454352.1| taurine transporter subunit [Citrobacter koseri ATCC BAA-895] gi|157084238|gb|ABV13916.1| hypothetical protein CKO_02810 [Citrobacter koseri ATCC BAA-895] Length = 275 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 19/267 (7%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVLY 378 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 14 LKWRWPFSRRITLSISTLAVILAVWWSVAALQLISPLFLPPPGQVLQKLIAIAGPQGFMD 73 Query: 379 VIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ R+++ ++ A II IPVGI +G P I + P +L P + PL Sbjct: 74 ATLWQHLAASLTRILLALLAAVIIGIPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPL 133 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V + LL+ + + +AG + A S + + Sbjct: 134 MVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGAGRVQVLWF 189 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILPG P +TG G W+ + +E+ + T GLG + + E + V+ Sbjct: 190 VILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVL 243 Query: 557 LGVLIMCCFVLALN---RFLWHPLYLY 580 G+ ++ L R L L + Sbjct: 244 AGIAVIAVIAFILELGLRALQRRLTPW 270 Score = 106 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 103/267 (38%), Gaps = 22/267 (8%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQ 63 PF R + + + + L P ++ + P +L Q Sbjct: 19 PFSRRITLSISTLAVILAVWWSVAALQLISPLFLPPPGQVLQKLIAIAGPQGFMDATLWQ 78 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + + R+L A++ +++ S + +L PI+++ + +P L +L V++F Sbjct: 79 HLAASLTRILLALLAAVIIGIPVGIAMGLSPTIRGILDPIIELYRPVPPLAYLPLMVIWF 138 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 E + I I+ + + S + + + ++S Q W++ Sbjct: 139 GIG--------ETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGAGRVQVLWFV 190 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +P ++P ++ + + + GW +VA+E+I G+G + A + +L Sbjct: 191 ILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLA 244 Query: 244 AMLTMLGVIFLYD---QLLFRPMIVWS 267 + + + F+ + + L R + W Sbjct: 245 GIAVIAVIAFILELGLRALQRRLTPWH 271 >gi|222102563|ref|YP_002539602.1| ABC transporter membrane spanning protein (aliphatic sulphonate) [Agrobacterium vitis S4] gi|221739164|gb|ACM39897.1| ABC transporter membrane spanning protein (aliphatic sulphonate) [Agrobacterium vitis S4] Length = 272 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 10/199 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +++ +++ RVV+ I + + + +G+ +G P I+P LA P + PL Sbjct: 71 GELLYHTGVSLRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALAQIPTLGWIPL 130 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ V +++ G + N +G ++E+ SF + W+ R Sbjct: 131 LMLLVGIEET----LKIIIIAKGAFVPVTLNTFSGIRNVSVKYREIGRSFRFSPWQQLRL 186 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP P TG AW + + E+ + + GLG + + V+ Sbjct: 187 IVLPAAAPTIFTGIRYGLTNAWTSLVGVELLA------SSEGLGYLLVWGRQMFWLDTVI 240 Query: 557 LGVLIMCCFVLALNRFLWH 575 + ++++ ++R L Sbjct: 241 VAMVVIGLVGFIMDRGLRR 259 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 14/220 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 PR + + + L + + R++ I L S R + Sbjct: 54 LPAPRYVYETASNLIGDGELLYHTGVSLRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIK 113 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P+ + IP LG++ ++ E I I +T + + + N+ Sbjct: 114 PLFLALAQIPTLGWIPLLMLLVGIE--------ETLKIIIIAKGAFVPVTLNTFSGIRNV 165 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 E+ RSFR S WQ+ + +P + P + + ++ W +V E++ + Sbjct: 166 SVKYREIGRSFRFSPWQQLRLIVLPAAAPTIFTGIRYGLTNAWTSLVGVELLASSE---- 221 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G + + L ++ AM+ + V F+ D+ L R Sbjct: 222 --GLGYLLVWGRQMFWLDTVIVAMVVIGLVGFIMDRGLRR 259 >gi|153808445|ref|ZP_01961113.1| hypothetical protein BACCAC_02739 [Bacteroides caccae ATCC 43185] gi|149128767|gb|EDM19984.1| hypothetical protein BACCAC_02739 [Bacteroides caccae ATCC 43185] Length = 275 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 99/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L I I+ + + + I ++ + L + +T +LS+ ++L Sbjct: 41 LFGIPFYITILALAVAAWMKAGRGTAIFTVLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R +L P+LD+MQ++P +L V++F G V G IF Sbjct: 101 VVGVPLGIWTANSPRADKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 85.4 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 82/236 (34%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + AW G FT +L + +G T+ V+ + Sbjct: 39 HVLFGIPFYITILALAVAAWMKAGRGTAIFTVLGLLLIYGMGFWEATMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A ++ +P+GIW P ++P L+ PA V+ V + + Sbjct: 99 ALVVGVPLGIWTANSPRADKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|254513156|ref|ZP_05125222.1| taurine ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] gi|221533155|gb|EEE36150.1| taurine ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] Length = 421 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV I ++I IP+G +G P + + P PLV+ + Sbjct: 230 SLLRVVAGFIAGALIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + AG S A S + W+ R++I+P P Sbjct: 290 TGK----IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 8/156 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+ + LR+++ + L S PI++ M+ +P L + Sbjct: 222 SLWQHLGWSLLRVVAGFIAGALIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV 281 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W MT + + + + S S WQ Sbjct: 282 IIWFGIWETGK--------IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQI 333 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ VP S+P + ++M W VVA+E++ Sbjct: 334 MRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369 >gi|325264227|ref|ZP_08130959.1| taurine ABC transporter, permease protein [Clostridium sp. D5] gi|324030711|gb|EGB91994.1| taurine ABC transporter, permease protein [Clostridium sp. D5] Length = 263 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 87/249 (34%), Gaps = 15/249 (6%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385 PEN ++ + W V +G I+N F V + + Sbjct: 6 SLPENMQKIICGAISILGFLLLWQAAVSLTGLGKIMPGPAVILNAFFRSFVEEIAGYTVL 65 Query: 386 -----TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ RV+V I+A ++ I +G+ +G + + PF +++ P + L + Sbjct: 66 GHIFWSLSRVLVGYILACLLGITLGLLMGRFRLMEAIFNPFYEMIRPIPPIAWISLAILW 125 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 ++ T + NV G A + A + + ++LP Sbjct: 126 FGIG----ESMTYFIIFLATFNVLTINVYRGTKALNQELAGCAKMLGANETQVFWTVVLP 181 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 PY G +W A + +E+ + G+G I + + P++ +G++ Sbjct: 182 ATVPYIFAGMQIGLSTSWAAVVAAEMVR------SSRGVGFLIVSGMDLNNIPQIFVGII 235 Query: 561 IMCCFVLAL 569 + L Sbjct: 236 AIGLVGFLL 244 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 103/251 (41%), Gaps = 18/251 (7%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRT 68 ++I +L F+L+ L + P I++ + +++ + + Sbjct: 12 QKIICGAISILGFLLLWQAAVSLTGLGKIMPGPAVILNAFFRSFVEEIAGYTVLGHIFWS 71 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L +++ L L + R + + P ++++ IP + +++ +++F Sbjct: 72 LSRVLVGYILACLLGITLGLLMGRFRLMEAIFNPFYEMIRPIPPIAWISLAILWFGIG-- 129 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E F IF + +T ++Y+ + ++L ++ + Q FW + +P + Sbjct: 130 ------ESMTYFIIFLATFNVLTINVYRGTKALNQELAGCAKMLGANETQVFWTVVLPAT 183 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + M + +S W VVA+EM+ G+G I + ++ I ++ + Sbjct: 184 VPYIFAGMQIGLSTSWAAVVAAEMV------RSSRGVGFLIVSGMDLNNIPQIFVGIIAI 237 Query: 249 LGVIFLYDQLL 259 V FL + Sbjct: 238 GLVGFLLATCM 248 >gi|297192568|ref|ZP_06909966.1| glycine betaine ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297151399|gb|EDY62016.2| glycine betaine ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 681 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 73/509 (14%), Positives = 149/509 (29%), Gaps = 39/509 (7%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL----DVHSLPQYASRTTLRML 73 N D + + V + V + + T M+ Sbjct: 125 NALDAMGWTGVFAAGVLFAWRAAGLGRSGVKVAATAFGAFAVCGLLGMWDATLLTIALMV 184 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 A+ + L + A S R+ +L P+LD MQ +P +L V+ F P Sbjct: 185 VAVTCAALLGVLIGLAAGLSDRVDRLLRPVLDTMQVLPAFAYLLPFVLVFGTGTP----- 239 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 AA+F M L + E S S + WQ+ +P + ++ Sbjct: 240 ---AALFCTVIYAAPPMARLTTLGLRGADPAVLEASTSLGANAWQRLRTARLPLARKQML 296 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + ++ VV + ++ G G+G + A+ D+ L A + ++ + Sbjct: 297 LGLNQTIMMALSMVVIAALVGAG-------GLGEEVYSALSTVDVGKALAAGIPIVLIAV 349 Query: 254 LYDQ---LLFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFS--- 307 D+ + + L + + F+ + F+ Sbjct: 350 WLDRTTAAAGDRIGRSAPGGGLLHGRSGWALAGGGVAAAVLLRFVAGTSWPDGWTFAIST 409 Query: 308 -------PLSNNVKKLCRTLG---VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 ++ N+ LG HF L + + V + Sbjct: 410 PVNKAQVWITENLSSGIPVLGGTETWSEHFTLWVLNPMRDGLTALPWWAVLLLVAALAWL 469 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 W + VL V T+ +V+ +++ + + GI + Sbjct: 470 VGTWMTALTATLAMAAIGVLGVWTKSLDTLSQVLAALVVTLFLGVLAGILCARAGRLERW 529 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 ++P + P V+ VV+ ++ + +++ I G Sbjct: 530 LRPVLDAMQTMPQFVYLIPVVALFGVARVS-AIVAAVVYALPAVVRI---TAQGLREVDP 585 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYY 506 E + S + + + LP P Sbjct: 586 AALEASRSLGASTRQQLLRVQLPLARPAL 614 Score = 79.6 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + T ++L+A+V++L + L A++ RL L P+LD MQ++P +L V F Sbjct: 495 SLDTLSQVLAALVVTLFLGVLAGILCARAGRLERWLRPVLDAMQTMPQFVYLIPVVALFG 554 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 A ++AI A + + Q L + E SRS S Q+ + Sbjct: 555 V--------ARVSAIVAAVVYALPAVVRITAQGLREVDPAALEASRSLGASTRQQLLRVQ 606 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P L + + VV ++ G + + ++ + A Sbjct: 607 LPLARPALQLAVNQGVVLVLAVVVVGALVGGGALGYD-------VVKGLSRGEMGLGMTA 659 Query: 245 MLTMLGVIFLYDQL 258 + ++ + + D++ Sbjct: 660 GVAIVCLGLVLDRI 673 >gi|84394016|ref|ZP_00992754.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio splendidus 12B01] gi|84375353|gb|EAP92262.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio splendidus 12B01] Length = 364 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-LDVHSLPQYASRTTLRMLSAMVISL 80 L++ +I + L Q + + + V +T + + A T +++++ L Sbjct: 98 LVSTPAPFMLIILFLVAWQFSNLKLGVATAVSLTMIGLIGAWSEAMTTLSLVMTSVFFCL 157 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S + PILD MQ+ P +L V+ F G V G + IF Sbjct: 158 LIGLPMGIWLARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 214 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SF S Q + + +P ++P ++ + ++ Sbjct: 215 A-----LPPVVRLTILGIQQVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTL 269 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + L D++ Sbjct: 270 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 93/281 (33%), Gaps = 14/281 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + S L+ V+ IR P +F+ + F ++ Sbjct: 53 PFAEAVLPVDTWVESGLNWLVEHGRPLFQAIR--VPIDFILSSFETALVSTPAPFMLIIL 110 Query: 353 CGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 VA + +G T ++ T+ V+ + +I +P+GIW+ Sbjct: 111 FLVAWQFSNLKLGVATAVSLTMIGLIGAWSEAMTTLSLVMTSVFFCLLIGLPMGIWLARS 170 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + ++P + PA V+ +V N+ ++ I ++ I G Sbjct: 171 NTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILG 226 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 P D E SF + + I LP P + G + + +++ + + G Sbjct: 227 IQQVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG- 285 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 286 ------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320 >gi|225619374|ref|YP_002720600.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira hyodysenteriae WA1] gi|225214193|gb|ACN82927.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease componen [Brachyspira hyodysenteriae WA1] Length = 278 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 10/196 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D + ++ + + + I IP+GI + + + P L+ P + Sbjct: 79 PDNGTLFQHILASLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAW 138 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+++ S ++ + N +G A VA +F + + Sbjct: 139 IPMMILWFGIGLG----AKSAIVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRRQM 194 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + + +P PY TG + G +W + +E+ + + GLG I + + Sbjct: 195 LKEVAIPTALPYIFTGLRVSLGSSWTSLCAAEMLA------ASRGLGFMIQLNRQLARAD 248 Query: 554 EVVLGVLIMCCFVLAL 569 +++G+L + L Sbjct: 249 LIIVGMLTIGAVGAIL 264 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 92/251 (36%), Gaps = 21/251 (8%) Query: 12 SRRIFPNIFDLLAFVLVIGII--NILLHGIQETTVPRDIVDIVPITL-----DVHSLPQY 64 S+ ++ ++ F+++ +I L P + L D +L Q+ Sbjct: 28 SKFFIISVISVVVFLIIWQLITDVFKLFPSYSLPSPYTVFKSFIYKLTNKAPDNGTLFQH 87 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + L+ + A ++ +V P+ D+++ IP + ++ +++F Sbjct: 88 ILASLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAWIPMMILWFG 147 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 K +F S + Y + + V+++F S Q + Sbjct: 148 IGLGAKSA--------IVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRRQMLKEVA 199 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P + + +S+ W + A+EM+ G+G I L + I+ Sbjct: 200 IPTALPYIFTGLRVSLGSSWTSLCAAEMLAAS------RGLGFMIQLNRQLARADLIIVG 253 Query: 245 MLTMLGVIFLY 255 MLT+ V + Sbjct: 254 MLTIGAVGAIL 264 >gi|167573338|ref|ZP_02366212.1| taurine ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 285 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 91/283 (32%), Gaps = 14/283 (4%) Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 K R R H V F V + + Sbjct: 13 ALPAAGTGSDKAPRERRRPRVHAGHAAAIATWAALVGGWWLAARFEWVSAALLPSPEAVL 72 Query: 365 GYIVNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 +V T D + ++ R+ +A IPVGI I + + P + Sbjct: 73 RKLVTLSTEGFDDATLGQHLFASLSRMAAAFALAIATAIPVGILIATNRIVRGVVDPIVE 132 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 P + PL+V + LL+ + AGA+ A Sbjct: 133 FYRPIPPLAYLPLMVVWFGIGDTSK----ILLIYLTMFAPLTIATAAGANGVSASRLRAA 188 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +S T ++ R+++LP P +TG A G W+ + +E+ + T GLG + Sbjct: 189 ASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMV 242 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583 ++ VV G+L++ LAL R L L + Sbjct: 243 YSASRFLVTDVVVAGILVIGAIALALEIGLRALQRRLTPWRAE 285 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 92/224 (41%), Gaps = 17/224 (7%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 R +V + D +L Q+ + RM +A +++ L A +R + V+ PI++ Sbjct: 73 RKLVTLSTEGFDDATLGQHLFASLSRMAAAFALAIATAIPVGILIATNRIVRGVVDPIVE 132 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 + IP L +L VV+F K I I+ + +T + + Sbjct: 133 FYRPIPPLAYLPLMVVWFGIGDTSK--------ILLIYLTMFAPLTIATAAGANGVSASR 184 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 + S + ++ ++ +P ++P ++ + +++ GW +VA+E+I G+ Sbjct: 185 LRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGL 238 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 G + A + ++ +L + + + + L R + W Sbjct: 239 GFMVYSASRFLVTDVVVAGILVIGAIALALEIGLRALQRRLTPW 282 >gi|148265891|ref|YP_001232597.1| binding-protein-dependent transport systems inner membrane component [Geobacter uraniireducens Rf4] gi|146399391|gb|ABQ28024.1| binding-protein-dependent transport systems inner membrane component [Geobacter uraniireducens Rf4] Length = 289 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + +++ R + +A ++ +P+G +G + Q L P P+ Sbjct: 88 GELFGHIGVSLQRALTGFFLAVVVAVPLGFLMGRYSRLEKIADLMIQGLRNTPHFALLPV 147 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + + + W+IL N I+G + + A S + + Sbjct: 148 FIMVLGIGESSK----IAITFLAAVWFILINTISGVKCVDPLYLKAAKSMGTSDTDLFIK 203 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILP P V+GA + A I +E+ + +GLG +I S PE+ Sbjct: 204 VILPASIPSIVSGARLGVKSSLMAVIGAEMLA------AKSGLGFFIQNSHLMYRIPEMY 257 Query: 557 LGVLIMCCFVLALNRFL 573 G+L + F L +N L Sbjct: 258 AGILALAIFGLLINYLL 274 Score = 99 bits (248), Expect = 1e-18, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R L+ ++++ L + RL + ++ +++ P L Sbjct: 88 GELFGHIGVSLQRALTGFFLAVVVAVPLGFLMGRYSRLEKIADLMIQGLRNTPHFALLPV 147 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ E + I F + VW + + + + + ++S S Sbjct: 148 FIMVLGIG--------ESSKIAITFLAAVWFILINTISGVKCVDPLYLKAAKSMGTSDTD 199 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P S+P +V + + V+ +EM+ G+G +I + + Sbjct: 200 LFIKVILPASIPSIVSGARLGVKSSLMAVIGAEMLAAKS------GLGFFIQNSHLMYRI 253 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 + +L + L + LL Sbjct: 254 PEMYAGILALAIFGLLINYLL 274 >gi|94500530|ref|ZP_01307061.1| ABC-type proline/glycine betaine transport system, permease component [Oceanobacter sp. RED65] gi|94427320|gb|EAT12299.1| ABC-type proline/glycine betaine transport system, permease component [Oceanobacter sp. RED65] Length = 313 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T +++++ +L ++S + ++ PILD MQ+ P +L V+ F Sbjct: 125 AMTTLSLVITSLFFCILIGLPMGIWLSRSDKAVSIVRPILDAMQTTPAFVYLIPIVMLFS 184 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 PGKV G + IFA+ M + +P DL E +R+F S Q + + Sbjct: 185 ---PGKVAGVIVTIIFAVP-----PMIRLTNLGIRQVPEDLIEAARAFGTSPKQLLFKVQ 236 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + ++ G VV + MI V PG+G + I D+ Sbjct: 237 LPLALPTIMAGVNQTLMLGLSMVVIASMIAV-------PGLGLMVLQGIGRNDIGIATVG 289 Query: 245 MLTMLGVIFLYDQL 258 L ++ + + D++ Sbjct: 290 GLGIVILAIILDRI 303 Score = 81.1 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 88/279 (31%), Gaps = 30/279 (10%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 + + P++ + + L VI L + + + + I + Sbjct: 55 IVPVLRPVFQVIAQPITWFLNAIESLLLVIPAPLIIIALAALAWKLSNRRIGIATLFGLL 114 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 + + AW T+ V+ + +I +P+GIW+ Sbjct: 115 AIGLIGAWD-------------------QAMTTLSLVITSLFFCILIGLPMGIWLSRSDK 155 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 S ++P + PA V+ +V S + ++ I ++ G Sbjct: 156 AVSIVRPILDAMQTTPAFVYLIPIVMLFSPG----KVAGVIVTIIFAVPPMIRLTNLGIR 211 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 P D E A +F + + + LP P + G + +++ + + Sbjct: 212 QVPEDLIEAARAFGTSPKQLLFKVQLPLALPTIMAGVNQTLMLGLSMVVIASMIA----- 266 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + + +G L + + L+R Sbjct: 267 --VPGLGLMVLQGIGRNDIGIATVGGLGIVILAIILDRI 303 >gi|152969527|ref|YP_001334636.1| alkanesulfonate transporter permease subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893997|ref|YP_002918731.1| alkanesulfonate transporter permease subunit [Klebsiella pneumoniae NTUH-K2044] gi|262040961|ref|ZP_06014183.1| aliphatic sulfonates ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330013856|ref|ZP_08307813.1| putative aliphatic sulfonates transport permease protein SsuC [Klebsiella sp. MS 92-3] gi|150954376|gb|ABR76406.1| putative ABC transporter [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546313|dbj|BAH62664.1| putative aliphatic sulfonates transporter permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041655|gb|EEW42704.1| aliphatic sulfonates ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328533327|gb|EGF60074.1| putative aliphatic sulfonates transport permease protein SsuC [Klebsiella sp. MS 92-3] Length = 263 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 107/259 (41%), Gaps = 18/259 (6%) Query: 23 LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V+V + + + + P ++ L Q+ + ++ R L I Sbjct: 19 VGTVIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQHLAISSWRALVGFAIGGS 78 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + ++ SR +L + +++++P L + +++F E A IF Sbjct: 79 IGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ETAKIFL 130 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + ++ + + + + NI R L E++RS+ LSG+ F ++ +P ++P ++ + ++ Sbjct: 131 VSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPSVMVGVRFALG 190 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W ++ +E I GIG A + ++ A++ + L D QL Sbjct: 191 LMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVVAIILYAILGKLADVCAQL 244 Query: 259 LFRPMIVWSNKFRLERTTG 277 L R + W+ + L+ Sbjct: 245 LERLWLRWNPAYHLQEANA 263 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 86/249 (34%), Gaps = 26/249 (10%) Query: 350 CVVCGVAIGIAWQSIGYIVNHF-------TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 +V +A + W S + + T + I+ +R +V I I + Sbjct: 22 VIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQHLAISSWRALVGFAIGGSIGL 81 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 +G+ G + Q+L P PLV+ L+ GT + Sbjct: 82 ILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DETAKIFLVSLGTLF 137 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I N G E+A S+ ++G+ +R++ILPG P + G A G W I Sbjct: 138 PIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPSVMVGVRFALGLMWLTLI 197 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV-------LALNRFL-- 573 V+E S G+G + E VV+ +++ L R Sbjct: 198 VAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILYAILGKLADVCAQLLERLWLR 251 Query: 574 WHPLYLYGT 582 W+P Y Sbjct: 252 WNPAYHLQE 260 >gi|238750477|ref|ZP_04611978.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia rohdei ATCC 43380] gi|238711408|gb|EEQ03625.1| Glycine betaine/L-proline transport system permease protein proW [Yersinia rohdei ATCC 43380] Length = 367 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + I+ L Q +T+ + +V + + A T +L+++ + Sbjct: 102 LLGMPAPVAILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAMVTLALVLTSLFFCI 161 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 162 LIGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P DL E + SF + Q + + +P +MP ++ + ++ Sbjct: 219 ALP-----PIVRLTILGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTL 273 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 324 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + +I F + V + + P Sbjct: 64 PLDSWV------THGIDWIVLHFRPLFQGIRVPVDFILSGFQHLLLGMPAPV-------- 109 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ +V + +T+ V+ + + Sbjct: 110 ---AILVFALIAWQFSTLGMGVATLVSLVAIGAIGAWSQAM----VTLALVLTSLFFCIL 162 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ + + I+P + PA V+ +V N+ ++ I Sbjct: 163 IGLPLGIWLARSNNAARIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G P D E A SF + + LP P + G A + Sbjct: 219 ALPPIVRLTILGIKQVPEDLIEAAESFGANPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 278 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAIILDRL 324 >gi|332800284|ref|YP_004461783.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp. Re1] gi|332698019|gb|AEE92476.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter sp. Re1] Length = 282 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L T +L+++++ +L A + + ++L PILD MQ++P +L Sbjct: 88 GLWDEMLFTLSIVLTSVILCILIGVPLGIYTAYNSKAEIILNPILDGMQTMPSFVYLIPA 147 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F + A+FA ++ N+P ++ E + SF S WQ Sbjct: 148 MIFFGLG--------TVPAVFATIIYSTPPCIRLTSLAIKNVPEEMREAAYSFGSSRWQT 199 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P +MP ++ + + VV S MI G+G + +AI D+ Sbjct: 200 LIKVELPQAMPTIMAGINQTTMMAMSMVVISSMI-------GAKGLGENVLIAINRSDIA 252 Query: 240 AILYAMLTMLGVIFLYDQL 258 + ++++ + + D++ Sbjct: 253 MGFNSGISIVFLAIIIDRI 271 Score = 78.4 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 11/202 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 T +L + T+ V+ +I+ +I +P+GI+ + + P + P+ Sbjct: 81 ITLIGLLGLWDEMLFTLSIVLTSVILCILIGVPLGIYTAYNSKAEIILNPILDGMQTMPS 140 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 V+ + + I + + P + +E A SF + Sbjct: 141 FVYLIPAMIFFGLG----TVPAVFATIIYSTPPCIRLTSLAIKNVPEEMREAAYSFGSSR 196 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 W+ + LP P + G A + ++S + GLG + + + Sbjct: 197 WQTLIKVELPQAMPTIMAGINQTTMMAMSMVVISSMIG-------AKGLGENVLIAINRS 249 Query: 551 SFPEVVLGVLIMCCFVLALNRF 572 + + + ++R Sbjct: 250 DIAMGFNSGISIVFLAIIIDRI 271 >gi|325264908|ref|ZP_08131636.1| sulfonate ABC transporter, permease protein SsuC [Clostridium sp. D5] gi|324029897|gb|EGB91184.1| sulfonate ABC transporter, permease protein SsuC [Clostridium sp. D5] Length = 268 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 76/216 (35%), Gaps = 11/216 (5%) Query: 359 IAWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + + + + F +W I ++ RV +A++ + +G G P Sbjct: 44 LLYVLVDFATGQFEITPYSGTLWGHLIHSLKRVASGFGLAAVCGLILGFLSGGIPIARRL 103 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P L+ P + P+ + N L+ + + I N + G S P Sbjct: 104 VDPLIHLVRTVPGIGWLPVAIVWFGIGEGN----TLFLIALASFFPIYINTVHGTSQVPE 159 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 G+ +R +ILP FP G G AW ++ E + T Sbjct: 160 VTLRAGRMLGAKGFALFRTVILPAAFPDVAVGLRLGLGVAWAYLVLGE------VTGVTE 213 Query: 538 GLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GLGA + + G V+ ++++ C + L Sbjct: 214 GLGAVMTDGRMLGHVDIVLATMIVIACAGKLTDVLL 249 Score = 103 bits (257), Expect = 9e-20, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 76/201 (37%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L + + R+ S ++ + + L+ ++ P++ +++++P +G+L Sbjct: 63 GTLWGHLIHSLKRVASGFGLAAVCGLILGFLSGGIPIARRLVDPLIHLVRTVPGIGWLPV 122 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +V+F +F I + + + + +P R G+ Sbjct: 123 AIVWFGIGEGN--------TLFLIALASFFPIYINTVHGTSQVPEVTLRAGRMLGAKGFA 174 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P + + + + W ++V +G+ G+G+ + + Sbjct: 175 LFRTVILPAAFPDVAVGLRLGLGVAWAYLV------LGEVTGVTEGLGAVMTDGRMLGHV 228 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 +L M+ + L D LL Sbjct: 229 DIVLATMIVIACAGKLTDVLL 249 >gi|294339047|emb|CAZ87396.1| Glycine betaine transport system permease protein opuAB [Thiomonas sp. 3As] Length = 286 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 +T +L+A V+ +L L+AKSR L L P+LDIMQ++P +L V++F Sbjct: 96 LIKTLALVLAAEVLVILIGVPTGILSAKSRLLEKTLRPVLDIMQTMPAFVYLVPAVIFFG 155 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G IFA + + + +P +L E ++SF + WQ + Sbjct: 156 L---GLVPGVISTTIFA-----LPPLIRLTTLGIRQVPHELVEATQSFGATWWQLLTKVQ 207 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P ++P ++ + S+ G VV S MI G G+G+ + I + D+ Sbjct: 208 IPSALPSIMAGVNQSIMLGLSMVVISAMIGAG-------GLGNVVLEGITQLDVGKGFVG 260 Query: 245 MLTMLGVIFLYDQL 258 L ++ + + D+L Sbjct: 261 GLCVVILAIILDRL 274 Score = 85.4 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 11/213 (5%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 W + V L T+ V+ ++ +I +P GI + ++ Sbjct: 73 GWSLAIFSVLGLGLVWNLGYWDDLIKTLALVLAAEVLVILIGVPTGILSAKSRLLEKTLR 132 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P ++ PA V+ V + + ++ ++ G P++ Sbjct: 133 PVLDIMQTMPAFVYLVPAVIFFGLGLVPGVISTTIF----ALPPLIRLTTLGIRQVPHEL 188 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 E SF T W+ + +P P + G + + ++S + G GL Sbjct: 189 VEATQSFGATWWQLLTKVQIPSALPSIMAGVNQSIMLGLSMVVISAMIGAG-------GL 241 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 G + E + + +G L + + L+R Sbjct: 242 GNVVLEGITQLDVGKGFVGGLCVVILAIILDRL 274 >gi|59711393|ref|YP_204169.1| glycine betaine transporter subunit [Vibrio fischeri ES114] gi|59479494|gb|AAW85281.1| glycine betaine transporter subunit [Vibrio fischeri ES114] Length = 360 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80 L++ ++ + L Q + + + + + + A T +++++ L Sbjct: 95 LVSTPAPFMLLILFLLAWQFSNLKLGVSTAISLLFIGLIGAWSQAMTTLALVMTSVFFCL 154 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+SR + PILD MQ+ P +L V+ F G V G + IF Sbjct: 155 LIGLPMGIWLARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 211 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SF + Q + + +P ++P ++ + ++ Sbjct: 212 A-----LPPVVRLTILGIQQVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTL 266 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + L D++ Sbjct: 267 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 14/229 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 F ++ + + ++ V+ + ++ T+ V+ + +I +P Sbjct: 100 APFMLLILFLLAWQFSNLKLGVSTAISLLFIGLIGAWSQAMTTLALVMTSVFFCLLIGLP 159 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 160 MGIWLARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPP 215 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ++ I G P D E SF + I LP P + G + + ++ Sbjct: 216 VVRLTILGIQQVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVI 275 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + + G GLG + + +G L + + L+R Sbjct: 276 ASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317 >gi|222053468|ref|YP_002535830.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221562757|gb|ACM18729.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 255 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 72/193 (37%), Gaps = 10/193 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + D+ + I++ R ++A + IP+G+++G I P Q+ Sbjct: 42 DVVRAIVELADMGTLWSHMGISLARFGAAYLLAVLAGIPLGLFLGRFIRCHKAIDPLIQV 101 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L +FPL V N ++ + + +L I+ A P + +VA Sbjct: 102 LRPISPIAWFPLAVLWFGIG----NAPAVFIIFLASFYPVLLATISAVRAVPPVYLKVAG 157 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F + +I+P FP + G A G W + E+ +GLG I Sbjct: 158 NFGARADMTFLRVIVPAAFPGIMVGLHIAVGTGWIHLVAGEMLG------AQSGLGFMIV 211 Query: 545 ESTEKGSFPEVVL 557 ++ +++ Sbjct: 212 DARNFLRTDQIMA 224 Score = 111 bits (278), Expect = 4e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 93/230 (40%), Gaps = 15/230 (6%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 R+ + L+AF L+ + ++ P D+V + D+ +L + + R Sbjct: 10 RLALPLTSLIAFTLLWQVAARRYP-PEQFPAPSDVVRAIVELADMGTLWSHMGISLARFG 68 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A ++++L + R + P++ +++ I + + V++F Sbjct: 69 AAYLLAVLAGIPLGLFLGRFIRCHKAIDPLIQVLRPISPIAWFPLAVLWFGIG------- 121 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 A+F IF + + + + ++ +P +V+ +F F + VP + PG++ Sbjct: 122 -NAPAVFIIFLASFYPVLLATISAVRAVPPVYLKVAGNFGARADMTFLRVIVPAAFPGIM 180 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 + +++ GW +VA EM+ G+G I A I+ Sbjct: 181 VGLHIAVGTGWIHLVAGEMLG------AQSGLGFMIVDARNFLRTDQIMA 224 >gi|91776909|ref|YP_546665.1| binding-protein-dependent transport systems inner membrane component [Methylobacillus flagellatus KT] gi|91710896|gb|ABE50824.1| binding-protein-dependent transport systems inner membrane component [Methylobacillus flagellatus KT] Length = 283 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 92/268 (34%), Gaps = 17/268 (6%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIG 365 + R P N L L I+W + G+ + + Sbjct: 15 GKPSAQQARKRLWAVRGGPGNHEFLVRCLGFMIPLAIWWAASLSGLIPETFLPDPPKVLK 74 Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 ++ + + W I+ RV ++A+++ +P+G+ G + I+P + Sbjct: 75 RLLLWISDEGFGQDFW---ISFVRVSSGFLLAAVLALPIGVLAGTFRRVQIFIEPLMDFI 131 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 PA F PLV+ + L+ GT + ++ + P E A + Sbjct: 132 RYMPAVAFVPLVLLWCGVGEASK----IALIFIGTFFQMVLMMAGNVRQVPMAQIEAAQT 187 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 T +ILP P + G AW +V+E+ + GLG I Sbjct: 188 MGATRRELLFKVILPSAAPALLDTIRVTLGWAWTYLVVAELVA------ANEGLGYAILR 241 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + ++ G+L++ L ++ L Sbjct: 242 AQRFLLTDKIFAGILVIGLIGLIQDQLL 269 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 85/192 (44%), Gaps = 14/192 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + +R+ S +++ + LA RR+ + + P++D ++ +P + F+ +++ Sbjct: 92 SFVRVSSGFLLAAVLALPIGVLAGTFRRVQIFIEPLMDFIRYMPAVAFVPLVLLWCGVG- 150 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E + I IF + M M ++ +P E +++ + + + + +P Sbjct: 151 -------EASKIALIFIGTFFQMVLMMAGNVRQVPMAQIEAAQTMGATRRELLFKVILPS 203 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + P L+ + +++ W ++V +E++ + G+G I A + I +L Sbjct: 204 AAPALLDTIRVTLGWAWTYLVVAELVAANE------GLGYAILRAQRFLLTDKIFAGILV 257 Query: 248 MLGVIFLYDQLL 259 + + + DQLL Sbjct: 258 IGLIGLIQDQLL 269 >gi|197334765|ref|YP_002155547.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio fischeri MJ11] gi|197316255|gb|ACH65702.1| glycine betaine/L-proline transport system permease protein ProW [Vibrio fischeri MJ11] Length = 360 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80 L++ ++ + L Q + + + + + + A T +++++ L Sbjct: 95 LVSTPAPFMLLILFLLAWQFSNLKLGVSTAISLLFIGLIGAWSQAMTTLALVMTSVFFCL 154 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+SR + PILD MQ+ P +L V+ F G V G + IF Sbjct: 155 LIGLPMGIWLARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 211 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SF + Q + + +P ++P ++ + ++ Sbjct: 212 A-----LPPVVRLTILGIQQVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTL 266 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + L D++ Sbjct: 267 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 14/229 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 F ++ + + ++ V+ + ++ T+ V+ + +I +P Sbjct: 100 APFMLLILFLLAWQFSNLKLGVSTAISLLFIGLIGAWSQAMTTLALVMTSVFFCLLIGLP 159 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +GIW+ + I+P + PA V+ +V N+ ++ I Sbjct: 160 MGIWLARSRTAAKFIRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPP 215 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ++ I G P D E SF + I LP P + G + + ++ Sbjct: 216 VVRLTILGIQQVPTDLIEAGHSFGANKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVI 275 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + + G GLG + + +G L + + L+R Sbjct: 276 ASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 317 >gi|238788929|ref|ZP_04632719.1| Taurine ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] gi|238722956|gb|EEQ14606.1| Taurine ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] Length = 290 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 95/270 (35%), Gaps = 33/270 (12%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYI--VNHFTYQDVLYVIWLGCI------ 385 R + FW + V++ + W ++ + ++ V+ + Sbjct: 26 RPKTSRRLPVAKGFWLSIATVVSVILLWWTVTALQLISPLFLPAPQQVLHQLLVIASPQG 85 Query: 386 ------------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 ++ R++V ++ A + +P GI +G + + P ++ P + Sbjct: 86 FMDATLWQHLAASLGRILVALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAY 145 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL+V + LL+ I +AG + A + + W+ Sbjct: 146 LPLMVIWFGIGETSK----ILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASHWQV 201 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 ++ILP P +TG G W+ + +E+ + T GLG + + E + Sbjct: 202 LWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATD 255 Query: 554 EVVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ + R + L + Sbjct: 256 VVIAGISVIAIIAFGMELSLRAIQRRLTPW 285 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 105/248 (42%), Gaps = 17/248 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L V + +I+ L + + + +V P +L Q+ + + R+L A++ ++ Sbjct: 52 LWWTVTALQLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILVALLAAVA 111 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + VL P+++I + +P L +L V++F E + I Sbjct: 112 LGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 163 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + +T + + ++ + +R+ S WQ W++ +P ++P ++ + + + Sbjct: 164 IYLAIFAPITLAAVAGVRSVAQVRVRAARALGASHWQVLWFVILPSALPEILTGIRIGLG 223 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258 GW +VA+E+I G+G + A + ++ + + + F L + Sbjct: 224 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRA 277 Query: 259 LFRPMIVW 266 + R + W Sbjct: 278 IQRRLTPW 285 >gi|262373174|ref|ZP_06066453.1| nitrate ABC transporter, permease [Acinetobacter junii SH205] gi|262313199|gb|EEY94284.1| nitrate ABC transporter, permease [Acinetobacter junii SH205] Length = 293 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV++ ++ A I +P+G+W+G + + + P +LL P + PL+V Sbjct: 99 AASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 158 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 159 GETTK----VLLIFFSILAPVIISSTHGVISHQLNRERAALSLGASQSQVFWHVILPTAL 214 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + +TG G W+ + SE+ + G+G + + + VVLG++++ Sbjct: 215 SHILTGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVVLGIIVIA 268 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 269 IVAVSFELFL 278 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 91/211 (43%), Gaps = 14/211 (6%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 +++ +L Q+ + + R+L A+V ++ ++ + VL P++++++ Sbjct: 82 LEVSQQGFMKATLWQHLAASISRVLLALVAAIAIGVPLGLWMGLNKWVRAVLDPLVELLR 141 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 IP L +L V++F E + IF S + + S + + + E Sbjct: 142 PIPPLAYLPLLVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVISHQLNRERA 193 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 + S S Q FW++ +P ++ ++ + + + GW +VASE++ GIG Sbjct: 194 ALSLGASQSQVFWHVILPTALSHILTGIRIGLGVGWSTLVASELVA------ADRGIGFM 247 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + A + ++ ++ + V ++ L Sbjct: 248 VQSAAQFLITDTVVLGIIVIAIVAVSFELFL 278 >gi|167041162|gb|ABZ05921.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_001B09] gi|167041912|gb|ABZ06651.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_133I24] Length = 719 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 94/565 (16%), Positives = 184/565 (32%), Gaps = 61/565 (10%) Query: 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQ 108 I I + V + + T +L A IS L + +S+R+ L PIL++MQ Sbjct: 184 AAITMIYISVFGQWKPSMETLSFVLVAAPISFLLGLALGIWSYRSKRIEAALNPILNVMQ 243 Query: 109 SIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV 168 ++P ++ +V F G GA IFA M L + ++ + Sbjct: 244 TMPHYSYIVVIMVMFG---IGDHAGAIATIIFATP-----PMVRLTLLGLRKVSPEVVQA 295 Query: 169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSY 228 + + +Q + + +P + ++ + ++ + V + I G+G Sbjct: 296 GKMSGCNEFQLLFKVLIPTARRDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGWN 348 Query: 229 IALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLYL 288 + LA+ + + L A + + + L D++ + W++K + Sbjct: 349 LLLALNQLRIGLALEAGICISLIAVLLDKMS----LAWAHKQTDYFANLNFLQRHKYGLF 404 Query: 289 FRKTNFLRFIGYSSWNFF----------SPLSNNVKKLCRTLGVIRFHFPENFLQL---- 334 F + I S +F+ P + + + + + F QL Sbjct: 405 FVGAVIVGLIFASFGSFYFKEGFNYLYEVPHNKGISGEPFWNAGVDWIWDTFFFQLKIFN 464 Query: 335 ---------CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LGC 384 M + F +V G I +V FT L W Sbjct: 465 TWLIVDVLQPMRAAYLRMPIVATFVLVMGTGYIIGGIRSALVVGGFTLFIALSPWWDRAL 524 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +T + +I + II + G + L FP+ V+ V+ Sbjct: 525 VTAYMATFGVIASGIIGVISGSLAAQNTTSTKIALGICDTLQTFPSFVYLIPVMMLFGIT 584 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + + Y I G + P + AS +T + I P FP Sbjct: 585 DTSVLIAVIIYATIPATRY----TIEGLRSVPPALHDAASMSGVTRLQRLFQIDFPLAFP 640 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK--GSFPEVVLGVLIM 562 + + G A I+ LG YI ++ G ++LG+ + Sbjct: 641 HIMLGINQTVVFALFMVIIGAFIGTED-------LGQYIMKALSDLKGGGKALILGLCV- 692 Query: 563 CCFVLALNRFLWHPLYLYGTRCLRL 587 LA++ + + + +L Sbjct: 693 AFIGLAVDNLIR----TWANKRKKL 713 >gi|170750957|ref|YP_001757217.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] gi|170657479|gb|ACB26534.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] Length = 286 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 13/201 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV +A+ +P+G+ IG P I + + P Q+L P + PL + Sbjct: 92 AASLSRVYGGFALAAAAALPLGLLIGRVPLIRALLDPALQVLRPVPVTAWLPLAMILFGL 151 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+ G + IL N + G + E A+ TG + ++LP Sbjct: 152 GPRS----AFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPAQFVRVVLPAAL 207 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TG G AW +V E+ TGLGA I E+ + V+ G+ ++ Sbjct: 208 PSIFTGLRLGLGFAWVVIVVGEM------TGVQTGLGAIIMEARQLSRTEIVICGMAVIG 261 Query: 564 CFVLALNRFLW---HPLYLYG 581 + + L + Sbjct: 262 VAGFVSDWLVMQLSRRLLAWS 282 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 82/213 (38%), Gaps = 17/213 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L + + + R+ ++ L + + +L P L +++ +P+ +L Sbjct: 85 GTLWTHLAASLSRVYGGFALAAAAALPLGLLIGRVPLIRALLDPALQVLRPVPVTAWLPL 144 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F +A F +F + + + + ++ L E + +G Sbjct: 145 AMILFGLG--------PRSAFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPA 196 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +F + +P ++P + + + + W +V EM V G+G+ I A + Sbjct: 197 QFVRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMTGVQT------GLGAIIMEARQLSRT 250 Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268 ++ M + F+ D L+ R ++ WS Sbjct: 251 EIVICGMAVIGVAGFVSDWLVMQLSRRLLAWSP 283 >gi|227494339|ref|ZP_03924655.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces coleocanis DSM 15436] gi|226832073|gb|EEH64456.1| nitrate/sulfonate/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces coleocanis DSM 15436] Length = 270 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 82/233 (35%), Gaps = 18/233 (7%) Query: 349 FCVVCGVAIGIAWQSIG------YIVNHFTYQDVLYVIWLG--CITMFRVVVLIIIASII 400 VV G+AI +IG V + Y + IW+ ++ RV+ + + + Sbjct: 34 VSVVGGIAIWWILATIGINLPTPLEVANRFYGMIANGIWITDTLASLARVLTGFAMGTAL 93 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 IPVG +G+ +P+ Q P PL + + ++ Sbjct: 94 AIPVGFLMGWYVPARGIFEPWIQFFRTVPPLAIIPLAIVLMGIG----EQPKIFVIFLAA 149 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 + + G A R + +++P P+ + G G AW Sbjct: 150 FLSCVISTFQGVINVDKTLINAARVLGAGDGRIFAKVVVPASTPFILVGMRVGLGSAWAT 209 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ + + GLG + + P + + ++ + F L ++R L Sbjct: 210 VVAAELIA------ASVGLGYRMQNAQIYYDMPTIFVSLITIGVFGLFMDRIL 256 Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 89/252 (35%), Gaps = 17/252 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 ++++ V I I IL P ++ + + + R+L+ + Sbjct: 32 NIVSVVGGIAIWWILATIGINLPTPLEVANRFYGMIANGIWITDTLASLARVLTGFAMGT 91 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L + P + +++P L + +V E IF Sbjct: 92 ALAIPVGFLMGWYVPARGIFEPWIQFFRTVPPLAIIPLAIVLMGIG--------EQPKIF 143 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + S +Q + N+ + L +R + F + VP S P ++ M + + Sbjct: 144 VIFLAAFLSCVISTFQGVINVDKTLINAARVLGAGDGRIFAKVVVPASTPFILVGMRVGL 203 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 W VVA+E+I G+G + A D+ I +++T+ D++L Sbjct: 204 GSAWATVVAAELIAASV------GLGYRMQNAQIYYDMPTIFVSLITIGVFGLFMDRILL 257 Query: 261 ---RPMIVWSNK 269 + W + Sbjct: 258 FAENKLTGWQER 269 >gi|298675885|ref|YP_003727635.1| binding-protein-dependent transporter inner membrane subunit [Methanohalobium evestigatum Z-7303] gi|298288873|gb|ADI74839.1| binding-protein-dependent transport systems inner membrane component [Methanohalobium evestigatum Z-7303] Length = 260 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 10/213 (4%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 + + + + + I++ + +I A +I IPVGI +G+ ++ P + Sbjct: 42 FDVVTSFISTVESGTLFIDFSISLMHFGIGVIAALLIGIPVGIVMGWFKTVNRISDPIIE 101 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 +L P + P + + H ++ G + I+ N G + P E A Sbjct: 102 ILRPIPPLAWIPFALVWLGLTHT----AAGFVIFVGAVFPIIINTYTGFKSVPKINVEAA 157 Query: 484 SSFH-ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + R+I P P G G W + +E + GLG Sbjct: 158 KVLGCVKQRSLIRHIAFPSSLPSITAGIRIGMGVGWMCLVAAEFFG-----VSKNGLGYK 212 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + V++ + ++ L +++ Sbjct: 213 LWWHYGLHQMDFVLMYMFMLGILGLIIDKVFRK 245 Score = 116 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 101/255 (39%), Gaps = 15/255 (5%) Query: 11 ISRRIFPNIFDLLAFVLVIGIIN-ILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 ++++ P I L+ V + I+ ++ D+V T++ +L S + Sbjct: 6 VAQKNAPEITSLIVAVTLWQIVAEYIIRRELLLPSFFDVVTSFISTVESGTLFIDFSISL 65 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 + ++ +LL + + + + PI++I++ IP L ++ F +V+ Sbjct: 66 MHFGIGVIAALLIGIPVGIVMGWFKTVNRISDPIIEILRPIPPLAWIPFALVWLGL---- 121 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPFS 188 AA F IF V+ + + Y ++P+ E ++ ++ P S Sbjct: 122 ----THTAAGFVIFVGAVFPIIINTYTGFKSVPKINVEAAKVLGCVKQRSLIRHIAFPSS 177 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + + M GW +VA+E V G+G + + +L M + Sbjct: 178 LPSITAGIRIGMGVGWMCLVAAEFFGVSKN-----GLGYKLWWHYGLHQMDFVLMYMFML 232 Query: 249 LGVIFLYDQLLFRPM 263 + + D++ + + Sbjct: 233 GILGLIIDKVFRKYI 247 >gi|167566227|ref|ZP_02359143.1| taurine ABC transporter, permease protein [Burkholderia oklahomensis EO147] Length = 285 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 91/283 (32%), Gaps = 14/283 (4%) Query: 305 FFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 K R R H V F V + + Sbjct: 13 ALPAAGTGSDKAPRERRRPRVHAGHAAAIATWAALVGGWWLAARFEWVSAALLPSPEAVL 72 Query: 365 GYIVNHFTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 +V T D + ++ R+ +A IPVGI I + + P + Sbjct: 73 RKLVTLSTEGFDDATLGQHLFASLSRMAAAFALAIATAIPVGILIATNRIVRGVVDPIVE 132 Query: 424 LLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVA 483 P + PL+V + LL+ + AGA+ A Sbjct: 133 FYRPIPPLAYLPLMVVWFGIGDASK----ILLIYLTMFAPLTIATAAGANGVSASRVRAA 188 Query: 484 SSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYI 543 +S T ++ R+++LP P +TG A G W+ + +E+ + T GLG + Sbjct: 189 ASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMV 242 Query: 544 AESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYGTR 583 ++ VV G+L++ LAL R L L + Sbjct: 243 YSASRFLVTDVVVAGILVIGAIALALEIGLRALQRRLTPWRAE 285 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 93/224 (41%), Gaps = 17/224 (7%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 R +V + D +L Q+ + RM +A +++ L A +R + V+ PI++ Sbjct: 73 RKLVTLSTEGFDDATLGQHLFASLSRMAAAFALAIATAIPVGILIATNRIVRGVVDPIVE 132 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 + IP L +L VV+F + + I I+ + +T + + Sbjct: 133 FYRPIPPLAYLPLMVVWFGIG--------DASKILLIYLTMFAPLTIATAAGANGVSASR 184 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 + S + ++ ++ +P ++P ++ + +++ GW +VA+E+I G+ Sbjct: 185 VRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGL 238 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 G + A + ++ +L + + + + L R + W Sbjct: 239 GFMVYSASRFLVTDVVVAGILVIGAIALALEIGLRALQRRLTPW 282 >gi|86147801|ref|ZP_01066108.1| glycine betaine/L-proline transport system permease [Vibrio sp. MED222] gi|85834439|gb|EAQ52590.1| glycine betaine/L-proline transport system permease [Vibrio sp. MED222] Length = 364 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80 L++ +I + L Q + + + V +T + A T +++++ L Sbjct: 98 LVSTPAPFMLIILFLVAWQFSNLKLGLATAVSLTFIGLIGAWSEAMTTLSLVMTSVFFCL 157 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S + PILD MQ+ P +L V+ F G V G + IF Sbjct: 158 LIGLPMGIWLARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 214 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P +L E SF S Q + + +P ++P ++ + ++ Sbjct: 215 A-----LPPVVRLTILGIQQVPEELIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTL 269 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + L D++ Sbjct: 270 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320 Score = 86.9 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 94/281 (33%), Gaps = 14/281 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + S L+ V+ IR P +F+ + F ++ Sbjct: 53 PFAEAVLPVDTWVESGLNWLVEHGRPLFQAIR--VPIDFILSSFETALVSTPAPFMLIIL 110 Query: 353 CGVAIGIAWQSIGYIVN-HFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 VA + +G T+ ++ T+ V+ + +I +P+GIW+ Sbjct: 111 FLVAWQFSNLKLGLATAVSLTFIGLIGAWSEAMTTLSLVMTSVFFCLLIGLPMGIWLARS 170 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + ++P + PA V+ +V N+ ++ I ++ I G Sbjct: 171 NTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILG 226 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 P + E SF + + I LP P + G + + +++ + + G Sbjct: 227 IQQVPEELIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG- 285 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 286 ------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320 >gi|224367278|ref|YP_002601441.1| ABC-type transporter, permease protein (membrane spanning protein) [Desulfobacterium autotrophicum HRM2] gi|223689994|gb|ACN13277.1| ABC-type transporter, permease protein (membrane spanning protein) [Desulfobacterium autotrophicum HRM2] Length = 258 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 85/201 (42%), Gaps = 10/201 (4%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + + ++ RV+ + +I +P+ I P ++ + L + P Sbjct: 49 LAETGELAKHLIVSFKRVLAGFSVTLVIAVPLSFLIYILPVFKRLLRVPLEFLRSVPPIS 108 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 PL++ + +++ + + + N++ G + +++E++ + Sbjct: 109 TIPLLILWFGIGEASKMA----VIVMASFFPVFLNLMGGLNTIEKEWQELSETLKFNHAE 164 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 + RY++ PG FP ++TG W A + +E+ + +GLG I +S E G Sbjct: 165 YIRYVLFPGAFPSFLTGIQLGLSYCWRALMGAEMIA------AASGLGYLILDSQEMGRI 218 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 +V +G++ + + L+R L Sbjct: 219 DKVFVGIITLGICGIVLDRVL 239 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 90/213 (42%), Gaps = 17/213 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L ++ + R+L+ ++L+ + L +L L+ ++S+P + + Sbjct: 53 GELAKHLIVSFKRVLAGFSVTLVIAVPLSFLIYILPVFKRLLRVPLEFLRSVPPISTIPL 112 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F K+ +A+ F +F ++ L I ++ +E+S + + + + Sbjct: 113 LILWFGIGEASKMAVIVMASFFPVF--------LNLMGGLNTIEKEWQELSETLKFNHAE 164 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 Y+ P + P + + + +S W ++ +EMI G+G I + + + Sbjct: 165 YIRYVLFPGAFPSFLTGIQLGLSYCWRALMGAEMIAAAS------GLGYLILDSQEMGRI 218 Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWSN 268 + ++T+ + D++ LF +I W + Sbjct: 219 DKVFVGIITLGICGIVLDRVLIKLFNRLIPWKD 251 >gi|186897091|ref|YP_001874203.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|186700117|gb|ACC90746.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] Length = 264 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 17/240 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +V L Q+ + ++ R L I V + SR +L Sbjct: 39 LLAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLN 98 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 + +++++P L + +++F E A IF + ++ + + Y + NI Sbjct: 99 SSVQMIRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIKNI 150 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E++RS+ LSG++ + +P ++P ++ + ++ W ++ +E I Sbjct: 151 DSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANS---- 206 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTGI 278 GIG A + ++ A++ + L D QLL R + W ++ + Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWLRWHPAYQQKSGEAQ 264 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIWLGCITMFRV 390 R++ + V VA+ W S ++ + I+ +R Sbjct: 10 HRLAPWILPVALVVGWQVAVEAGWLSNRILLAPSAVVTAFWALTKSGELWQHLTISSWRA 69 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 ++ I I + +G+ G + Q++ P PLV+ Sbjct: 70 LIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGI----DES 125 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G + E+A S+ ++G+R ++LPG P + G Sbjct: 126 AKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGV 185 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 186 RFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239 >gi|266621608|ref|ZP_06114543.1| taurine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288866706|gb|EFC99004.1| taurine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 258 Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 76/186 (40%), Gaps = 10/186 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ +++A +I +P+G +G+ +S ++P +++ P + PL + V Sbjct: 66 LVSLKVACSGLLLAIVIGVPLGWLMGWYKTVSRFVRPIFEIMRPIPPIAWIPLTILWVGI 125 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 ++++ F + + N AG + VA ++ + + + I +P Sbjct: 126 G----LEAKAMIIFFASFVPCVINATAGIKSTNQTLINVAKTYGASDFTIFLKIGIPSSL 181 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G A AW+ + +E+ + GLG I + G +VLG++ + Sbjct: 182 PMTFAGIRIALNSAWSTLVAAELLA------ANAGLGYMINMGRQFGRVDIIVLGMVTIG 235 Query: 564 CFVLAL 569 A Sbjct: 236 ILGFAF 241 Score = 106 bits (266), Expect = 8e-21, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 106/257 (41%), Gaps = 20/257 (7%) Query: 11 ISRRIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 + R ++ +L F+L+ G + + + P + + L+ S +T Sbjct: 5 LDRYAVISVLSVLTFLLIWQGCVTAGILSDKILPAPTKVFAALFDKLNNKSPDGSLLQTN 64 Query: 70 LRM-----LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + + S ++++++ L + + + PI +IM+ IP + ++ T+++ Sbjct: 65 ILVSLKVACSGLLLAIVIGVPLGWLMGWYKTVSRFVRPIFEIMRPIPPIAWIPLTILWVG 124 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 K + IF + + + + + L V++++ S + F +G Sbjct: 125 IGLEAKAM--------IIFFASFVPCVINATAGIKSTNQTLINVAKTYGASDFTIFLKIG 176 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P S+P + ++++ W +VA+E++ G+G I + + + I+ Sbjct: 177 IPSSLPMTFAGIRIALNSAWSTLVAAELLAANA------GLGYMINMGRQFGRVDIIVLG 230 Query: 245 MLTMLGVIFLYDQLLFR 261 M+T+ + F + + + Sbjct: 231 MVTIGILGFAFSWIFTK 247 >gi|167041614|gb|ABZ06361.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_009A22] Length = 719 Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats. Identities = 89/523 (17%), Positives = 168/523 (32%), Gaps = 54/523 (10%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 + I I + V + + T +L A IS L + +S+R+ L PIL++M Sbjct: 183 LAGITMIYISVFGQWKPSMETLSFVLVAAPISFLLGLALGIWSYRSKRVEAALNPILNVM 242 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 Q++P +L V F G GA IFA M L + ++ + Sbjct: 243 QTMPHYAYLVPITVLFG---IGDHAGAIATIIFATP-----PMVRLTLLGLRKVSPEVVQ 294 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 + + +Q + + +P + ++ + ++ + V + I G+G Sbjct: 295 AGKMSGCNEFQLLFRVLIPTARRDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGW 347 Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLY 287 + LA+ + + L A + + + L D+L + W++K + Sbjct: 348 NLLLALNQLRIGLALEAGICISLIAVLLDKLS----LAWAHKQTDYFAHLNFFQRHKYGL 403 Query: 288 LFRKTNFLRFIGYSSWNFF----------SPLSNNVKKLCRTLGVIRFHFPENFLQL--- 334 F + I S +F+ P + + + + + F QL Sbjct: 404 FFVGAVIVGLIFASVGSFYFKEGFNYLYEVPHNKGISGEPFWNAGVDWIWDTFFFQLKIF 463 Query: 335 ----------CSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW-LG 383 M + F +V G I +V FT L W Sbjct: 464 NTWLIVDVLQPMRAAYLRMPVVATFVLVMGTGYIIGGIRSALVVGGFTLFIALSPWWDRA 523 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T + +I + II + G + L FP+ V+ V+ Sbjct: 524 LVTAYMATFGVIASGIIGVVTGSLAAQNTTSTKIALGICDTLQTFPSFVYLIPVMMLFGI 583 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + + + Y + G + P + AS +T + I P F Sbjct: 584 TDTSVLIAVIIYATIPATRY----TVEGLRSVPPALHDAASMSGVTRLQRLLQIDFPLAF 639 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 P+ + G A I+ LG YI ++ Sbjct: 640 PHIMLGINQTVVFALFMVIIGAFIGTED-------LGQYILKA 675 >gi|297180193|gb|ADI16414.1| ABC-type proline/glycine betaine transport system, permease component [uncultured bacterium HF770_09N20] Length = 686 Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats. Identities = 85/552 (15%), Positives = 185/552 (33%), Gaps = 72/552 (13%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 + I L V + + +T +L A +S + A K+R++ + L P L++M Sbjct: 152 LAGFSTIYLAVFGQWEPSMQTLSFVLFAAPVSFILGLTLGIWAYKNRKVELTLNPFLNVM 211 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 Q +P +L +V+F G GA IFA M L + + E Sbjct: 212 QIMPHFSYLVPVMVFFG---IGDHAGAIATIIFATP-----PMVRLTVLGLKRVSPETLE 263 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 S +Q + + +P + ++ + ++ + V + I G+G Sbjct: 264 AGMMSGCSNFQLMYKVLIPTARRDILIGVNQ-------VIMQCLAMAVIASFIGAKGLGF 316 Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWVLY 287 + L++ + + + ++ + + D++ + W+NK + + + + Sbjct: 317 NLLLSLNGLRIGEAIEQGICIVLIAVVLDRMS----LAWANK-KTDYFADLT------FF 365 Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347 K + L + + + + + + I H ++ V ++ D F Sbjct: 366 KRHKYSLLFLVILVAGSVLAYVGTFFFREGFNYLYIVPHNKGITIKDTLQHGVDWIWDTF 425 Query: 348 WFCV---------------------VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL---- 382 +F + + VA +GYI+ ++ L Sbjct: 426 FFTLKGFNVFLIQQILMPMKAAYLSMPVVATLALTMGVGYIIGGIRSAAIVGGFILFIAL 485 Query: 383 ------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ITM+ + +I+++II + VG + + I FP+ ++ Sbjct: 486 TEWWDRALITMYLMSFAVIVSTIIGVTVGTLCAQNSYTAKFILLVCDTFQTFPSFIYLIP 545 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V+ + + + + Y + G + D + S + + W Sbjct: 546 VIMLFGVTDTSVCIAVIVYATVPATRY----TVEGLRSVSPDLHDAGSMSGVNRLQRWVK 601 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK----GSF 552 I LP FP+ G A + I+ + LG +I ++ G+ Sbjct: 602 IELPMSFPHMALGVNQTVVFALSMVIIGAMIGTDD-------LGQFILKALSDKNGTGNG 654 Query: 553 PEVVLGVLIMCC 564 + L V + Sbjct: 655 LTLGLCVAFIGL 666 >gi|218709173|ref|YP_002416794.1| glycine betaine/L-proline transport system permease ProW [Vibrio splendidus LGP32] gi|218322192|emb|CAV18306.1| Glycine betaine/L-proline transport system permease protein proW [Vibrio splendidus LGP32] Length = 364 Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80 L++ +I + L Q + + + + +T + A T +++++ L Sbjct: 98 LVSTPAPFMLIILFLVAWQFSNLKLGLATAISLTFIGLIGAWSGAMTTLSLVMTSVFFCL 157 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A+S + PILD MQ+ P +L V+ F G V G + IF Sbjct: 158 LIGLPMGIWLARSNTAAKFVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 214 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SF S Q + + +P ++P ++ + ++ Sbjct: 215 A-----LPPVVRLTILGIQQVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTL 269 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + L D++ Sbjct: 270 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320 Score = 88.8 bits (219), Expect = 3e-15, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 93/281 (33%), Gaps = 14/281 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + S L+ V+ IR P +F+ + F ++ Sbjct: 53 PFAEAVLPVDTWVESGLNWLVEHGRPLFQAIR--VPIDFILSSFETALVSTPAPFMLIIL 110 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR-VVVLIIIASIIWIPVGIWIGFR 411 VA + +G L W G +T V+ + +I +P+GIW+ Sbjct: 111 FLVAWQFSNLKLGLATAISLTFIGLIGAWSGAMTTLSLVMTSVFFCLLIGLPMGIWLARS 170 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + ++P + PA V+ +V N+ ++ I ++ I G Sbjct: 171 NTAAKFVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILG 226 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 P D E SF + + I LP P + G + + +++ + + G Sbjct: 227 IQQVPEDLIEAGHSFGASKKQMLYRIQLPLALPTIMAGVNQTLMLSLSMVVIASMIAVG- 285 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + + L+R Sbjct: 286 ------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 320 >gi|327439295|dbj|BAK15660.1| ABC-type proline/glycine betaine transport system, permease component [Solibacillus silvestris StLB046] Length = 287 Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 17/235 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F+L+I ++ G + I+ ++ I L + T +L + +I+++ Sbjct: 57 VFILIIAVLAFFATGKKFGLAIFSIIGLLFIL--NQGLWEQLMNTFTLVLFSSLIAIVIG 114 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L +KS+ + +L PILD MQ++P +L V +F G V G + IFA+ Sbjct: 115 IPLGILMSKSKVVEEILKPILDFMQTMPGFVYLIPAVAFFG---IGVVPGVFASVIFALP 171 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P L E + S+ + QK + +P S ++ + ++ Sbjct: 172 PTVRF-----TNLGIRQVPTHLIEAADSYGSTFTQKLVKVELPLSKSTIMAGINQTVLLS 226 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + A++ + A ++++ + D+L Sbjct: 227 LSMVVIASMI-------GAPGLGREVLSALQRAQIGNGFVAGISLVIFAIIVDRL 274 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 73/233 (31%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + I V+ A G + + + + + T V+ +IA + Sbjct: 53 IPPYVFILIIAVLAFFATGKKFGLAIFSIIGLLFILNQGLWEQLMNTFTLVLFSSLIAIV 112 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GI + + ++P + P V+ V+ + + Sbjct: 113 IGIPLGILMSKSKVVEEILKPILDFMQTMPGFVYLIPAVAFFGIGVVPGVFASVIF---- 168 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + G P E A S+ T + + LP + G + + Sbjct: 169 ALPPTVRFTNLGIRQVPTHLIEAADSYGSTFTQKLVKVELPLSKSTIMAGINQTVLLSLS 228 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + + ++ + + + F + ++R Sbjct: 229 MVVIASMIG-------APGLGREVLSALQRAQIGNGFVAGISLVIFAIIVDRL 274 >gi|328956608|ref|YP_004373994.1| aliphatic sulfonate ABC transporter [Carnobacterium sp. 17-4] gi|328672932|gb|AEB28978.1| aliphatic sulfonate ABC transporter [Carnobacterium sp. 17-4] Length = 245 Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 21/220 (9%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-----------GCITMFRVVVLIIIASI 399 + + + + W+ + Y+V H + + I+L ++FR++ I+I+ + Sbjct: 8 FIGLIGLFLVWECLYYVVAHPVIPNPIKTIYLFIQLFPVLLPHIFSSLFRILSAILISIL 67 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIWIG + + P L+ P F P+ + + L+++ Sbjct: 68 IGVPLGIWIGASKWANKLLSPLLYLIYPIPKVAFLPVFMLLFGLGDASK----ISLVVWI 123 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + ++ +V G + +V H + W+ + Y++ P I P ++G G A Sbjct: 124 IVFQLILSVRDGIKQIDPSYYQVLRMMHASKWQTFIYLLYPAILPQIISGLRVCIGIAVA 183 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 + +E + GLG YI + +P++ G+ Sbjct: 184 SLFFAE------NYATQYGLGYYIMNAWSVIDYPQMFCGI 217 Score = 97.7 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 90/248 (36%), Gaps = 17/248 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + + + + L + + +P I I L + + R+LSA++IS+L Sbjct: 8 FIGLIGLFLVWECLYYVVAHPVIPNPIKTIYLFIQLFPVLLPHIFSSLFRILSAILISIL 67 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S+ +L P+L ++ IP + FL ++ F K+ +F Sbjct: 68 IGVPLGIWIGASKWANKLLSPLLYLIYPIPKVAFLPVFMLLFGLGDASKISLVVWIIVF- 126 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + S+ + I +V R S WQ F YL P +P ++ + + + Sbjct: 127 -------QLILSVRDGIKQIDPSYYQVLRMMHASKWQTFIYLLYPAILPQIISGLRVCIG 179 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM---LTMLGVIFLYDQL 258 +A + + G+G YI A D + + + ++F L Sbjct: 180 ------IAVASLFFAENYATQYGLGYYIMNAWSVIDYPQMFCGILALCLLGFLLFKLIDL 233 Query: 259 LFRPMIVW 266 L R + W Sbjct: 234 LERFLTPW 241 >gi|167838946|ref|ZP_02465723.1| binding-protein-dependent transport systems inner membrane component [Burkholderia thailandensis MSMB43] Length = 291 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 77/182 (42%), Gaps = 10/182 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +++ RV + +A + +P+G+ IG + + + P QLL + P+ V Sbjct: 101 VSVMRVATGLGVALALGVPLGLLIGRVKWLDALLSPTFQLLRMISPLSWMPVAVMSFGIG 160 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + L+ F W IL + +G + + E+ S T +++LP I Sbjct: 161 ERS----ICFLLAFAALWPILMSTASGVAQIDRRWLELGESLAATRDELAWHVVLPAITA 216 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G A G W + +E+ + GLG + ++ ++ ++PE+ ++++ Sbjct: 217 SVLGGMRLAIGVLWIVLVPAEMLG------VSAGLGYLVLDTRDRLAYPELAAVIVVIGV 270 Query: 565 FV 566 Sbjct: 271 IG 272 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 84/224 (37%), Gaps = 14/224 (6%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P +D VP L L + + +R+ + + ++L L + + L +L P Sbjct: 78 APERALDSVPALLRDERLGMHVRVSVMRVATGLGVALALGVPLGLLIGRVKWLDALLSPT 137 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 +++ I L ++ V+ F E + F + + +W + S + I R Sbjct: 138 FQLLRMISPLSWMPVAVMSFGIG--------ERSICFLLAFAALWPILMSTASGVAQIDR 189 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 E+ S + + W++ +P ++ M +++ W +V +EM+ V Sbjct: 190 RWLELGESLAATRDELAWHVVLPAITASVLGGMRLAIGVLWIVLVPAEMLGVSA------ 243 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWS 267 G+G + + ++ + + D L + W+ Sbjct: 244 GLGYLVLDTRDRLAYPELAAVIVVIGVIGLALDALARAALARWT 287 >gi|297198469|ref|ZP_06915866.1| glycine betaine ABC transport system permease [Streptomyces sviceus ATCC 29083] gi|197717386|gb|EDY61420.1| glycine betaine ABC transport system permease [Streptomyces sviceus ATCC 29083] Length = 871 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 94/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI+ ++ ++ T +D L + A T +L A +I+L+ Sbjct: 49 LLLAGILAVIAFWLRGTLAGLLTFAGFAF-IDSLELWEDAMTTLSLVLVATIIALVIAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S R+ ++ P+LD MQ++P + +L +++F G G IFA+ Sbjct: 108 VGIWAARSSRVSGIVRPVLDFMQTLPAMIYLIPAILFFG---TGASAGIVATLIFALAPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + ++L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPRDTLLRVQLPLALPTVMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + M+ G + AI + ++ A + ++ + D++ Sbjct: 220 MAAIAGMVGTGGLGGD-------VNEAIGQLNVGLGSEAGVAIVILAIYLDRM 265 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 12/220 (5%) Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350 + ++ + +S L +T+ + + LQ ++ +L + F Sbjct: 3 RIPLGDWVNDTVDWLLDHVSWLFDFL-KTVFTGTYDGIDAVLQAPQPLLLAGILAVIAFW 61 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + +A + + +I + ++D T+ V+V IIA +I +PVGIW Sbjct: 62 LRGTLAGLLTFAGFAFIDSLELWED-------AMTTLSLVLVATIIALVIAVPVGIWAAR 114 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +S ++P + PA ++ + + + + + Sbjct: 115 SSRVSGIVRPVLDFMQTLPAMIYLIPAILFFGTGASAGIVATLIFALA----PGVRMTEL 170 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 G + E A +F T + LP P + G Sbjct: 171 GIRQVDKELVEAAEAFGTTPRDTLLRVQLPLALPTVMAGV 210 >gi|312114804|ref|YP_004012400.1| binding-protein-dependent transporters inner membrane component [Rhodomicrobium vannielii ATCC 17100] gi|311219933|gb|ADP71301.1| binding-protein-dependent transport systems inner membrane component [Rhodomicrobium vannielii ATCC 17100] Length = 294 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 80/237 (33%), Gaps = 22/237 (9%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTY--QDVLYVIWL----------GCITMFRVVVLII 395 W + +AI A G+I DV W I+ R + ++ Sbjct: 48 WALPILLIAIWEAGCRAGFIPARVLPAPSDVAIAFWATAKTGALFHHAAISTERALGGLL 107 Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 + I +G+ G + + Q++ P PLV+ L Sbjct: 108 VGGSIGFFLGVLNGLSKSAETLLDSLLQMIRNVPHLAIIPLVILWFGIG----EEAKLFL 163 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + I N G E+A + ++ + +R +ILPG P + G A G Sbjct: 164 VAIGVFFPIYLNTFHGIRTVDKGLIEMARVYGLSQFALFRRVILPGALPSVLVGLRYALG 223 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 W IV+E + + G+G + E V+LG++I + Sbjct: 224 IMWLTLIVAETIA------SSEGIGYMTMNAREFLQTDVVLLGIIIYAVLGKLADSL 274 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 96/236 (40%), Gaps = 17/236 (7%) Query: 39 IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGM 98 + P D+ T +L +A+ +T R L +++ F L S+ Sbjct: 69 ARVLPAPSDVAIAFWATAKTGALFHHAAISTERALGGLLVGGSIGFFLGVLNGLSKSAET 128 Query: 99 VLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSL 158 +L +L +++++P L + +++F E A +F + + + + + + Sbjct: 129 LLDSLLQMIRNVPHLAIIPLVILWFGIG--------EEAKLFLVAIGVFFPIYLNTFHGI 180 Query: 159 CNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDT 218 + + L E++R + LS + F + +P ++P ++ + ++ W ++ +E I + Sbjct: 181 RTVDKGLIEMARVYGLSQFALFRRVILPGALPSVLVGLRYALGIMWLTLIVAETIASSE- 239 Query: 219 VIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271 GIG A + +L ++ + L D L L + + W ++ Sbjct: 240 -----GIGYMTMNAREFLQTDVVLLGIIIYAVLGKLADSLTRALEQRALAWHPSYQ 290 >gi|296161625|ref|ZP_06844429.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295888102|gb|EFG67916.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 269 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 17/258 (6%) Query: 327 FPENFLQLCSNQRVSY-MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383 FP F +L +V+ L + ++ + T+ +L +I G Sbjct: 11 FPARFGRLTRFAKVAGQRLSLLAIFLIVWWLAAQRVPAFILPGPGKTWNALLDLIATGTF 70 Query: 384 ----CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 IT++RVV ++A+++ P+GI +G + S +P ++ A ++ + Sbjct: 71 AEDLGITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAIWAIFALI 130 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + ++ IL NV GA + ++ E+A SF ++ + I L Sbjct: 131 WFGISNGT----TIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSRSKVMTKIYL 186 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P + PY+ +GA A G W S+V+E + G+G + ++ + +V Sbjct: 187 PTVLPYFFSGARLAFGFGWRVSLVAETIG------SSNGVGYRLRQAADLVQTDQVFAWT 240 Query: 560 LIMCCFVLALNRFLWHPL 577 L M ++ L + PL Sbjct: 241 LTMVVLMVVLEYGILKPL 258 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 102/264 (38%), Gaps = 19/264 (7%) Query: 5 NILPPFISR-----RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH 59 ++ P R ++ LLA L++ + P + + + Sbjct: 9 SVFPARFGRLTRFAKVAGQRLSLLAIFLIVWWLAAQRVPAFILPGPGKTWNALLDLIATG 68 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + T R+++ +++ L L +RRLG P+L ++ ++ + F Sbjct: 69 TFAEDLGITLYRVVAGFLLAALVGTPLGILLGANRRLGSFCEPVLSVVNTVSAAIWAIFA 128 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F IF +F + + +++Q ++ + E++RSF++S + Sbjct: 129 LIWFGISNG--------TTIFVVFMEAMPLILTNVWQGAQSVNAEYVELARSFQMSRSKV 180 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P +P ++ GW + +E I + G+G + A Sbjct: 181 MTKIYLPTVLPYFFSGARLAFGFGWRVSLVAETIGSSN------GVGYRLRQAADLVQTD 234 Query: 240 AILYAMLTMLGVIFLYDQLLFRPM 263 + LTM+ ++ + + + +P+ Sbjct: 235 QVFAWTLTMVVLMVVLEYGILKPL 258 >gi|163845505|ref|YP_001623160.1| hypothetical protein BSUIS_B1419 [Brucella suis ATCC 23445] gi|163676228|gb|ABY40338.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 250 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 84/247 (34%), Gaps = 13/247 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +S+ + I + ++ + + + T ++ ++ RV+ ++ Sbjct: 13 LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVG +G+ S I+P Q P PL + + ++ Sbjct: 73 LAIPVGFLMGWYRIARSLIEPRVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + G + A + +I+P P+ + G G AW Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576 + +E+ + +GLG + ++ P + + ++ + L ++R L Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242 Query: 577 LYLYGTR 583 L + R Sbjct: 243 LTQWQER 249 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 91/245 (37%), Gaps = 17/245 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + G + G P D+++ L L + R+LS V+ + Sbjct: 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L R ++ P + + IP L + +V E IF IF + Sbjct: 79 FLMGWYRIARSLIEPRVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + YQ + ++ R L +R F + VP S+P ++ + + + W V Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264 VA+E+I G+G + A DL I +++T+ + D+LL R + Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244 Query: 265 VWSNK 269 W + Sbjct: 245 QWQER 249 >gi|55233214|gb|AAV48566.1| OpuAB [Halobacillus trueperi] Length = 281 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 17/237 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + F++V+G++ G + + ++ + I L + T ++ A +IS++ Sbjct: 52 IWLFIIVVGVLAFFASGKKLGLMAFSVIGLWFIA--NQELWEELMNTFTLVIFASLISVI 109 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + AKS+ +L P+LD MQ++P +L V +F G V G + IFA Sbjct: 110 IGVPFGIWMAKSKLAEKILTPVLDFMQTMPAFVYLIPAVAFFS---IGMVPGVFASVIFA 166 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + + + +L E S +F +G QK + + +P + ++ + ++ Sbjct: 167 TPPTVRF-----TNLGIRQVSHELIEASDAFGTTGTQKLFKVQLPMAKKTIMAGINQTVM 221 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + ++ ++ A L ++ + + D+ Sbjct: 222 LALSMVVIASMI-------GAKGLGQTVITGLQRAEVGTGFVAGLGIVILAIIIDRF 271 Score = 75.3 bits (184), Expect = 3e-11, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + L I V+ A G + + V + + T V+ +I+ I Sbjct: 50 IPIWLFIIVVGVLAFFASGKKLGLMAFSVIGLWFIANQELWEELMNTFTLVIFASLISVI 109 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P GIW+ + P + PA V+ V+ S + + Sbjct: 110 IGVPFGIWMAKSKLAEKILTPVLDFMQTMPAFVYLIPAVAFFSIGMVPGVFASVIFATPP 169 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 T + G ++ E + +F TG + + LP + G A + Sbjct: 170 TVRF----TNLGIRQVSHELIEASDAFGTTGTQKLFKVQLPMAKKTIMAGINQTVMLALS 225 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + ++ + L + + ++RF Sbjct: 226 MVVIASMIG-------AKGLGQTVITGLQRAEVGTGFVAGLGIVILAIIIDRF 271 >gi|225619375|ref|YP_002720601.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease [Brachyspira hyodysenteriae WA1] gi|225214194|gb|ACN82928.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, permease component [Brachyspira hyodysenteriae WA1] Length = 266 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 95/245 (38%), Gaps = 18/245 (7%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLS 74 + ++ F++V ++ T P ++ + +L ++ + + R+L+ Sbjct: 21 VISIIGFLIVWQLLTTYTPIKITTPKPLEVFKFLVWSLTHNIGQQTILGHILISIFRVLT 80 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 I + + ++ ++ P ++ + IP + ++ +++F Sbjct: 81 GFAIGAVTGIILGISMGVNKYARAIIRPFFEVFRQIPPIAWIPMAILWFGIG-------- 132 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E+ +F IF N+T + Y + L ++ + F ++ +P S+P + Sbjct: 133 EVPKVFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNERDIFLHVILPASVPQIFN 192 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 M + S W V+A+EM+ G+G I ++ +L M+ + V L Sbjct: 193 GMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIRGSDTANIPQVLAGMIAIGIVGLL 246 Query: 255 YDQLL 259 L+ Sbjct: 247 LSSLM 251 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ I++FRV+ I ++ I +GI +G + + I+PF ++ P + P+ + Sbjct: 67 ILGHILISIFRVLTGFAIGAVTGIILGISMGVNKYARAIIRPFFEVFRQIPPIAWIPMAI 126 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ GT + N AG+S A + ++I Sbjct: 127 LWFGIG----EVPKVFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNERDIFLHVI 182 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P G +W + +E+ S G+G I ++ + P+V+ G Sbjct: 183 LPASVPQIFNGMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIRGSDTANIPQVLAG 236 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L+ + Sbjct: 237 MIAIGIVGLLLSSLM 251 >gi|62318003|ref|YP_223856.1| taurine ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|83269979|ref|YP_419270.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|161621231|ref|YP_001595117.1| binding-protein-dependent transport systems inner membrane component [Brucella canis ATCC 23365] gi|189023256|ref|YP_001932997.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|237817550|ref|ZP_04596540.1| taurine ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|254695140|ref|ZP_05156968.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 3 str. Tulya] gi|254698241|ref|ZP_05160069.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 2 str. 86/8/59] gi|254699309|ref|ZP_05161137.1| Binding-protein-dependent transport systems inner membrane component [Brucella suis bv. 5 str. 513] gi|254706447|ref|ZP_05168275.1| Binding-protein-dependent transport systems inner membrane component [Brucella pinnipedialis M163/99/10] gi|254711265|ref|ZP_05173076.1| Binding-protein-dependent transport systems inner membrane component [Brucella pinnipedialis B2/94] gi|254711866|ref|ZP_05173677.1| Binding-protein-dependent transport systems inner membrane component [Brucella ceti M644/93/1] gi|254714935|ref|ZP_05176746.1| Binding-protein-dependent transport systems inner membrane component [Brucella ceti M13/05/1] gi|254731684|ref|ZP_05190262.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus bv. 4 str. 292] gi|256015947|ref|YP_003105956.1| taurine ABC transporter, permease protein [Brucella microti CCM 4915] gi|256030106|ref|ZP_05443720.1| Binding-protein-dependent transport systems inner membrane component [Brucella pinnipedialis M292/94/1] gi|256059757|ref|ZP_05449952.1| Binding-protein-dependent transport systems inner membrane component [Brucella neotomae 5K33] gi|256158277|ref|ZP_05456186.1| Binding-protein-dependent transport systems inner membrane component [Brucella ceti M490/95/1] gi|256252782|ref|ZP_05458318.1| Binding-protein-dependent transport systems inner membrane component [Brucella ceti B1/94] gi|260166843|ref|ZP_05753654.1| taurine ABC transporter, permease protein [Brucella sp. F5/99] gi|260544189|ref|ZP_05820010.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|260568666|ref|ZP_05839135.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|260759441|ref|ZP_05871789.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 4 str. 292] gi|260762685|ref|ZP_05875017.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 2 str. 86/8/59] gi|261215494|ref|ZP_05929775.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 3 str. Tulya] gi|261216626|ref|ZP_05930907.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261219861|ref|ZP_05934142.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313900|ref|ZP_05953097.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261318859|ref|ZP_05958056.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261319495|ref|ZP_05958692.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261323736|ref|ZP_05962933.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261749752|ref|ZP_05993461.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 5 str. 513] gi|261756221|ref|ZP_05999930.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|265987135|ref|ZP_06099692.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996797|ref|ZP_06109354.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|294853015|ref|ZP_06793687.1| sulfonate/nitrate/taurine transport system permease [Brucella sp. NVSL 07-0026] gi|306841185|ref|ZP_07473901.1| taurine ABC transporter, permease protein [Brucella sp. BO2] gi|306845344|ref|ZP_07477919.1| taurine ABC transporter, permease protein [Brucella sp. BO1] gi|75505039|sp|Q576D9|Y3424_BRUAB RecName: Full=Probable ABC transporter permease protein BruAb2_1124 gi|123545573|sp|Q2YJB4|Y3648_BRUA2 RecName: Full=Probable ABC transporter permease protein BAB2_1148 gi|62198196|gb|AAX76495.1| taurine ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82940253|emb|CAJ13314.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis biovar Abortus 2308] gi|161338042|gb|ABX64346.1| binding-protein-dependent transport systems inner membrane component [Brucella canis ATCC 23365] gi|189021830|gb|ACD74551.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|237787305|gb|EEP61523.1| taurine ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|255998607|gb|ACU50294.1| taurine ABC transporter, permease protein [Brucella microti CCM 4915] gi|260097460|gb|EEW81334.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|260155331|gb|EEW90412.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|260669759|gb|EEX56699.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 4 str. 292] gi|260673106|gb|EEX59927.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 2 str. 86/8/59] gi|260917101|gb|EEX83962.1| binding-protein-dependent transport system inner membrane component [Brucella abortus bv. 3 str. Tulya] gi|260918445|gb|EEX85098.1| conserved hypothetical protein [Brucella ceti B1/94] gi|260921715|gb|EEX88283.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292185|gb|EEX95681.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261298082|gb|EEY01579.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261299716|gb|EEY03213.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261302926|gb|EEY06423.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261736205|gb|EEY24201.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|261739505|gb|EEY27431.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 5 str. 513] gi|262551094|gb|EEZ07255.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264659332|gb|EEZ29593.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|294818670|gb|EFG35670.1| sulfonate/nitrate/taurine transport system permease [Brucella sp. NVSL 07-0026] gi|306274260|gb|EFM56072.1| taurine ABC transporter, permease protein [Brucella sp. BO1] gi|306288811|gb|EFM60129.1| taurine ABC transporter, permease protein [Brucella sp. BO2] Length = 250 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 85/247 (34%), Gaps = 13/247 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +S+ + I + ++ + + + T ++ ++ RV+ ++ Sbjct: 13 LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVG +G+ S I+P+ Q P PL + + ++ Sbjct: 73 LAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + G + A + +I+P P+ + G G AW Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576 + +E+ + +GLG + ++ P + + ++ + L ++R L Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242 Query: 577 LYLYGTR 583 L + R Sbjct: 243 LTQWQER 249 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 91/245 (37%), Gaps = 17/245 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + G + G P D+++ L L + R+LS V+ + Sbjct: 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L R ++ P + + IP L + +V E IF IF + Sbjct: 79 FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + YQ + ++ R L +R F + VP S+P ++ + + + W V Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264 VA+E+I G+G + A DL I +++T+ + D+LL R + Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244 Query: 265 VWSNK 269 W + Sbjct: 245 QWQER 249 >gi|229122458|ref|ZP_04251671.1| aliphatic sulfonates transport permease protein ssuC [Bacillus cereus 95/8201] gi|228661019|gb|EEL16646.1| aliphatic sulfonates transport permease protein ssuC [Bacillus cereus 95/8201] Length = 282 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I++FR I + I +G +GF + P Q+L P PL Sbjct: 76 GELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLDPSVQMLRTVPHLAVAPL 135 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + + LL+ G + + N G + +VA + + Sbjct: 136 FVLWFGFGETSK----VLLIADGAFFPLYVNAFLGIRGVDSKLFDVARVLEFSKRKLITK 191 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +ILP P + GA + G AW + +V+E+ T G+G I ++ + + V Sbjct: 192 LILPAKLPNLLLGARLSLGVAWVSLVVAELMG------STEGIGYMIMDARQFSNTDIVF 245 Query: 557 LGVLIMCCFVLALNRFL 573 +G++I + + Sbjct: 246 VGIIIFAFVGKFSDSLV 262 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 85/236 (36%), Gaps = 17/236 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P DI + L + S + R + I + T+ S R L Sbjct: 59 LPTPLDIFVAFQELIKTGELFGHLSISVFRAAAGFFIGGSLGIILGTIVGFSTRSEQYLD 118 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + +++++P L V++F KV+ A F + + + + + Sbjct: 119 PSVQMLRTVPHLAVAPLFVLWFGFGETSKVLLIADGAFF--------PLYVNAFLGIRGV 170 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L +V+R S + L +P +P L+ +S+ W +V +E++ Sbjct: 171 DSKLFDVARVLEFSKRKLITKLILPAKLPNLLLGARLSLGVAWVSLVVAELMG------S 224 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLER 274 GIG I A + + + ++ V D +LL + W + F+ E Sbjct: 225 TEGIGYMIMDARQFSNTDIVFVGIIIFAFVGKFSDSLVRLLEVKFLRWRDGFKGET 280 >gi|149201337|ref|ZP_01878312.1| binding-protein-dependent transport systems inner membrane component [Roseovarius sp. TM1035] gi|149145670|gb|EDM33696.1| binding-protein-dependent transport systems inner membrane component [Roseovarius sp. TM1035] Length = 421 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV+V + +++ IP+G +G P + + P PLV+ Sbjct: 230 SLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGIGE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + + AG S A S + W+ R++I+P P Sbjct: 290 SGK----IILLFLAALWIMTISARAGVSGVAISKVHAAYSLGASKWQLMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 74/196 (37%), Gaps = 14/196 (7%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 ++++ +L ++ + R++ + L S PI++ M Sbjct: 210 LIEVSKQGYQNFTLWEHLYWSLFRVIVGFALGALVGIPLGYAMGLSDWFRGWFDPIVEFM 269 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 + +P L + +++ GK I +F + +W MT S + + Sbjct: 270 RPVPPLALIPLVIIWAGIGESGK--------IILLFLAALWIMTISARAGVSGVAISKVH 321 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 + S S WQ ++ VP S+P + ++M W VVA+E++ G G Sbjct: 322 AAYSLGASKWQLMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGAGM 375 Query: 228 YIALAIKEQDLLAILY 243 I +A + Q +L Sbjct: 376 MIMVASRFQLTDIVLM 391 >gi|22127835|ref|NP_671258.1| taurine transporter subunit [Yersinia pestis KIM 10] gi|45440044|ref|NP_991583.1| taurine transporter subunit [Yersinia pestis biovar Microtus str. 91001] gi|51598010|ref|YP_072201.1| taurine transporter subunit [Yersinia pseudotuberculosis IP 32953] gi|108809279|ref|YP_653195.1| taurine transporter subunit [Yersinia pestis Antiqua] gi|108814043|ref|YP_649810.1| taurine transporter subunit [Yersinia pestis Nepal516] gi|145597430|ref|YP_001161505.1| taurine transporter subunit [Yersinia pestis Pestoides F] gi|150260765|ref|ZP_01917493.1| putative taurine transport system permease protein [Yersinia pestis CA88-4125] gi|153947400|ref|YP_001402884.1| taurine transporter subunit [Yersinia pseudotuberculosis IP 31758] gi|162419908|ref|YP_001608012.1| taurine transporter subunit [Yersinia pestis Angola] gi|165927845|ref|ZP_02223677.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939995|ref|ZP_02228531.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010451|ref|ZP_02231349.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213174|ref|ZP_02239209.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398652|ref|ZP_02304176.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418878|ref|ZP_02310631.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425704|ref|ZP_02317457.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468834|ref|ZP_02333538.1| taurine ABC transporter, permease protein [Yersinia pestis FV-1] gi|170022521|ref|YP_001719026.1| taurine transporter subunit [Yersinia pseudotuberculosis YPIII] gi|186897206|ref|YP_001874318.1| taurine transporter subunit [Yersinia pseudotuberculosis PB1/+] gi|218927393|ref|YP_002345268.1| taurine transporter subunit [Yersinia pestis CO92] gi|229836334|ref|ZP_04456501.1| putative taurine transport system permease protein [Yersinia pestis Pestoides A] gi|229840042|ref|ZP_04460201.1| putative taurine transport system permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842124|ref|ZP_04462279.1| putative taurine transport system permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229904576|ref|ZP_04519687.1| putative taurine transport system permease protein [Yersinia pestis Nepal516] gi|270488210|ref|ZP_06205284.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294502269|ref|YP_003566331.1| putative taurine transport system permease protein [Yersinia pestis Z176003] gi|21960968|gb|AAM87509.1|AE014000_13 taurine ABC transport system inner membrane permease protein [Yersinia pestis KIM 10] gi|45434899|gb|AAS60460.1| putative taurine transport system permease protein [Yersinia pestis biovar Microtus str. 91001] gi|51591292|emb|CAH22958.1| ABC taurine transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108777691|gb|ABG20210.1| taurine transport system permease protein [Yersinia pestis Nepal516] gi|108781192|gb|ABG15250.1| putative taurine transport system permease protein [Yersinia pestis Antiqua] gi|115346004|emb|CAL18869.1| putative taurine transport system permease protein [Yersinia pestis CO92] gi|145209126|gb|ABP38533.1| taurine transport system permease protein [Yersinia pestis Pestoides F] gi|149290173|gb|EDM40250.1| putative taurine transport system permease protein [Yersinia pestis CA88-4125] gi|152958895|gb|ABS46356.1| taurine ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|162352723|gb|ABX86671.1| taurine ABC transporter, permease protein [Yersinia pestis Angola] gi|165912035|gb|EDR30676.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920121|gb|EDR37422.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990541|gb|EDR42842.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205472|gb|EDR49952.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962872|gb|EDR58893.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051156|gb|EDR62564.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055394|gb|EDR65188.1| taurine ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749055|gb|ACA66573.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis YPIII] gi|186700232|gb|ACC90861.1| binding-protein-dependent transport systems inner membrane component [Yersinia pseudotuberculosis PB1/+] gi|229678694|gb|EEO74799.1| putative taurine transport system permease protein [Yersinia pestis Nepal516] gi|229690434|gb|EEO82488.1| putative taurine transport system permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696408|gb|EEO86455.1| putative taurine transport system permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706402|gb|EEO92409.1| putative taurine transport system permease protein [Yersinia pestis Pestoides A] gi|262360349|gb|ACY57070.1| putative taurine transport system permease protein [Yersinia pestis D106004] gi|270336714|gb|EFA47491.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294352728|gb|ADE63069.1| putative taurine transport system permease protein [Yersinia pestis Z176003] gi|320013319|gb|ADV96890.1| putative taurine transport system permease protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 284 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 101/281 (35%), Gaps = 29/281 (10%) Query: 318 RTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL 377 + + + P+ + + ++ VV A Q IG + Q VL Sbjct: 10 QAINLPAADAPKKTPRRLPANQTLWISIATLASVVALWWAVTALQLIGPLFLPA-PQQVL 68 Query: 378 YVIWLGC---------------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + +W ++ R+ V ++ A ++ +P GI +G ++ + P Sbjct: 69 HQLWTIASPQGFMDATLWQHLAASLGRIFVALLAAVVLGVPTGIAMGLNSNVRGVLDPLI 128 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 ++ P + PL+V + LL+ + +AG + + Sbjct: 129 EIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPVTLAAVAGVRSVAHVRVRA 184 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 A + + W+ +++LP P +TG G W+ + +E+ + T GLG Sbjct: 185 ARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFM 238 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + + E + V+ G+ ++ + R + L + Sbjct: 239 VQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 279 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 102/251 (40%), Gaps = 22/251 (8%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMVI 78 L + + L G P+ ++ + P +L Q+ + + R+ A++ Sbjct: 43 VVALWWAVTALQLIGPLFLPAPQQVLHQLWTIASPQGFMDATLWQHLAASLGRIFVALLA 102 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 +++ + + VL P+++I + +P L +L V++F E + Sbjct: 103 AVVLGVPTGIAMGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSK 154 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 I I+ + +T + + ++ +R+ S WQ W++ +P ++P ++ + + Sbjct: 155 ILLIYLAIFAPVTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRI 214 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LY 255 + GW +VA+E+I G+G + A + ++ + + + F L Sbjct: 215 GLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELS 268 Query: 256 DQLLFRPMIVW 266 + + R + W Sbjct: 269 LRAIQRRLTPW 279 >gi|160898108|ref|YP_001563690.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] gi|160363692|gb|ABX35305.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] Length = 399 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L+I ++ ++ + + + + + + A T +L+++V ++ Sbjct: 143 PLLILVLTLVAWQFAGRAMAIGAA-VSLVVVAMLGIWPEAMVTLSLVLTSLVFCMVIGLP 201 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L A S R P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 202 AGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIIFA---- 254 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + + DL E SR++ S WQ W + +P +MP ++ + ++ Sbjct: 255 -LPPLIRLTNLGIRQVRPDLIEASRAYGASPWQLLWKVQLPLAMPSIMAGVNQALMLSLS 313 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + + D++ Sbjct: 314 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 359 Score = 85.4 bits (210), Expect = 3e-14, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 80/231 (34%), Gaps = 16/231 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401 + ++ V +AWQ G + +L + +T+ V+ ++ +I Sbjct: 140 LPWPLLILVLTLVAWQFAGRAMAIGAAVSLVVVAMLGIWPEAMVTLSLVLTSLVFCMVIG 199 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 +P GI + +P + PA V+ VV N+ ++ I Sbjct: 200 LPAGILLASSDRAQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIIFAL 255 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 ++ G D E + ++ + W+ + LP P + G A + + Sbjct: 256 PPLIRLTNLGIRQVRPDLIEASRAYGASPWQLLWKVQLPLAMPSIMAGVNQALMLSLSMV 315 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G L + + L+R Sbjct: 316 VIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRI 359 >gi|148254724|ref|YP_001239309.1| putative sulfonate ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146406897|gb|ABQ35403.1| putative sulfonate ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 286 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 90/265 (33%), Gaps = 15/265 (5%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG--IAWQSIGYIVNHFTYQDVLY 378 G R H + +L + W + G + + + + Sbjct: 24 GADRRHAIGPATLQALSWLAPALLVVIWEALAQGGYLSPQVLPAPSKILRTAYKLTTQGT 83 Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ +++ R I I +G+ +GF + I Q++ A P PLV+ Sbjct: 84 LLNDLGVSLLRATAGFAIGGAIGFVLGLLVGFSRLAEALIDRSIQMIRAIPFLAVLPLVI 143 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + L+ G + I N G E+A ++ R II Sbjct: 144 VWLGVGEAEK----VFLVALGVTFPIYINTTLGIRQVDPKLIELARVQGLSPLALIRRII 199 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LPG P +TG A AW A +V+E +GLG ++ E +VL Sbjct: 200 LPGALPSILTGVRYALATAWLALVVAETIG------AQSGLGFLAMDAREFLRTDVIVLT 253 Query: 559 VLIMCCFVLALN---RFLWHPLYLY 580 ++I + + R+L L + Sbjct: 254 IVIYALIGVLADLIARWLERRLLAW 278 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 82/232 (35%), Gaps = 17/232 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P I+ +L + LR + I FV L SR ++ Sbjct: 65 LPAPSKILRTAYKLTTQGTLLNDLGVSLLRATAGFAIGGAIGFVLGLLVGFSRLAEALID 124 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 + ++++IP L L +V+ E +F + + + + + + Sbjct: 125 RSIQMIRAIPFLAVLPLVIVWLGVG--------EAEKVFLVALGVTFPIYINTTLGIRQV 176 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E++R LS + +P ++P ++ + +++ W +V +E I Sbjct: 177 DPKLIELARVQGLSPLALIRRIILPGALPSILTGVRYALATAWLALVVAETIG------A 230 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKF 270 G+G A + I+ ++ + L D + L R ++ W + Sbjct: 231 QSGLGFLAMDAREFLRTDVIVLTIVIYALIGVLADLIARWLERRLLAWHPNY 282 >gi|319942970|ref|ZP_08017253.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319743512|gb|EFV95916.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 647 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L +T +++A + L+ F L A+SR L L P+LDI+Q++P +L Sbjct: 454 GLWTPLLQTLALLVAAFLFILVIGFPLGILMARSRWLHRWLSPVLDIIQTMPSFVYLIPV 513 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F + A+FA + + + + E + SF + Q Sbjct: 514 LMLFGIG--------RIPALFATVVYATAPLVRLTALGIREVDARMVESAESFGCTRTQL 565 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 +++ +P + P ++ + ++ VV + MI G+G + AI+ D+ Sbjct: 566 LFWVLLPQARPAILAGINQAVMMSLGMVVVASMI-------GARGLGENVLQAIQTLDIG 618 Query: 240 AILYAMLTMLGVIFLYDQL 258 + A ++ + + D++ Sbjct: 619 RGVQAGAAIVILAIVIDRI 637 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 97/279 (34%), Gaps = 18/279 (6%) Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 + +W+ L++++ +L G F L + L ++ + G+ Sbjct: 371 FPAWSVADWLNDSLARLVSNHGET-FRAFSQSLLHGLLLPLERALAAVPPWLLLALLAGL 429 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPH 413 AW + G + + Y+I + T+ +V + +I P+GI + Sbjct: 430 AWHATGSLGSAAFSAAGFYLIGGLGLWTPLLQTLALLVAAFLFILVIGFPLGILMARSRW 489 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 + + P ++ P+ V+ V+ + P L+ +++ ++ G Sbjct: 490 LHRWLSPVLDIIQTMPSFVYLIPVLMLFGIGRI-PALFATVVYATA---PLVRLTALGIR 545 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 E A SF T + +++LP P + G A + +V+ + Sbjct: 546 EVDARMVESAESFGCTRTQLLFWVLLPQARPAILAGINQAVMMSLGMVVVASMIG----- 600 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + ++ + V + + ++R Sbjct: 601 --ARGLGENVLQAIQTLDIGRGVQAGAAIVILAIVIDRI 637 >gi|126730357|ref|ZP_01746168.1| binding-protein-dependent transport systems inner membrane component [Sagittula stellata E-37] gi|126709090|gb|EBA08145.1| binding-protein-dependent transport systems inner membrane component [Sagittula stellata E-37] Length = 421 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 4/145 (2%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRV++ +++ IP+G +G P + + P PLV+ Sbjct: 228 GYSLFRVILGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPLVIIWAGI 287 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L +L+ W + AG S A S + W+ R++I+P Sbjct: 288 GELGK----IILLFLAALWIMAIAARAGVSGVAISKVHAAYSLGASKWQIMRHVIVPNSL 343 Query: 504 PYYVTGAITACGGAWNASIVSEVAS 528 P TGA A G W + +E+ + Sbjct: 344 PEIFTGARVAMGVCWGTVVAAELVA 368 Score = 111 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 8/157 (5%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L ++ + R++ L S PI++ M+ +P L + Sbjct: 221 STLWEHLGYSLFRVILGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRPVPPLALIPL 280 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++ EL I +F + +W M + + + + S S WQ Sbjct: 281 VIIWAGIG--------ELGKIILLFLAALWIMAIAARAGVSGVAISKVHAAYSLGASKWQ 332 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ VP S+P + ++M W VVA+E++ Sbjct: 333 IMRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369 >gi|150376356|ref|YP_001312952.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150030903|gb|ABR63019.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 281 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 90/265 (33%), Gaps = 25/265 (9%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------- 383 +L+ ++ V + + + +L +W G Sbjct: 24 YLRRSGTAAGGWLSRYGLLIAVLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALL 83 Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +++ R A ++ IP+G+ +G I + + P QL A +P+ + Sbjct: 84 DDIAVSLQRSGTAFAGAVVLAIPLGLLMGQVRSIENALDPVLQLFRQTSALALYPVFILL 143 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + ++ + T + +L + I+G + E+A + + +R ++LP Sbjct: 144 LGLGEASK----VFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLP 199 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P G + A I SE+ G+G + + P + + Sbjct: 200 GAVPSIFVGLRLSATTALLLLIASEMIG------ANKGIGFQVMNAQYNFQIPLMFAAIF 253 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCL 585 I+ L N L ++ R L Sbjct: 254 ILAGLGLLSNYAL-----VFAQRRL 273 Score = 106 bits (266), Expect = 9e-21, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 19/258 (7%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRML 73 + + + LL VL + I P I+ + + +L + + R Sbjct: 35 WLSRYGLLIAVLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALLDDIAVSLQRSG 94 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A +++ L + R + L P+L + + L ++ Sbjct: 95 TAFAGAVVLAIPLGLLMGQVRSIENALDPVLQLFRQTSALALYPVFILLLGLG------- 147 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E + +F IF + ++ + S + + L E++R + S F + +P ++P + Sbjct: 148 -EASKVFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIF 206 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + +S + ++ASEMI GIG + A + + A+ + G+ Sbjct: 207 VGLRLSATTALLLLIASEMIGANK------GIGFQVMNAQYNFQIPLMFAAIFILAGLGL 260 Query: 254 LYDQLLF---RPMIVWSN 268 L + L R + WS+ Sbjct: 261 LSNYALVFAQRRLCRWSD 278 >gi|39937222|ref|NP_949498.1| putative taurine ABC transport system permease [Rhodopseudomonas palustris CGA009] gi|192293002|ref|YP_001993607.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter permease [Rhodopseudomonas palustris TIE-1] gi|39651080|emb|CAE29603.1| putative taurine ABC transport system permease protein [Rhodopseudomonas palustris CGA009] gi|192286751|gb|ACF03132.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 277 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV V ++A ++ + +G+ G+ +S ++P + L P + P+ + Sbjct: 82 GASLQRVAVGFLLACVVGLTLGLICGWWRTVSDYVRPVIEALRPIPPLAWIPITILWFGL 141 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ G + + + A W+ + +++P Sbjct: 142 GDA----ASYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTDVLIPASL 197 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W + +E+ + TGLG I +S VV G++ + Sbjct: 198 PIILPGLRIALGVGWMCVVTAELIA------AQTGLGYLIQQSRMLFQINNVVAGMVTIG 251 Query: 564 CFVLALNRFL 573 A++ L Sbjct: 252 LIGFAMSAIL 261 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 100/253 (39%), Gaps = 14/253 (5%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 F R + + F + I + L P I + + SL + + Sbjct: 25 AFAGRPMRAAVGLTAFFAIWQAITQLNLVDGFLLPSPVAIAEALWELALDGSLWVHLGAS 84 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ +++ + + R + + P+++ ++ IP L ++ T+++F Sbjct: 85 LQRVAVGFLLACVVGLTLGLICGWWRTVSDYVRPVIEALRPIPPLAWIPITILWFGLG-- 142 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 + A+ F +F V+ + + Y ++ + R+ + WQ F + +P S Sbjct: 143 ------DAASYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTDVLIPAS 196 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P ++ + +++ GW VV +E+I G+G I + + ++ M+T+ Sbjct: 197 LPIILPGLRIALGVGWMCVVTAELIAAQT------GLGYLIQQSRMLFQINNVVAGMVTI 250 Query: 249 LGVIFLYDQLLFR 261 + F +L R Sbjct: 251 GLIGFAMSAILER 263 >gi|126464361|ref|YP_001045474.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|126106172|gb|ABN78702.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] Length = 276 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 9/196 (4%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 V+ ++++R++ + +A ++ +G+ IG + +P L P + P Sbjct: 70 PYGVLLDIALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISALMPIPTLAWTP 129 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 +++ N ++ + I++NV+ G VA+S + + R Sbjct: 130 ILLLVFGI----DNRTTITVVFIAASFEIIYNVVTGIEMMTRKTYWVAASMGASRLQTLR 185 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 Y+I+PGI PY +TG G AW A I +E+ + + GLG I ++ E + Sbjct: 186 YVIIPGILPYLITGLKLGVGYAWRALIAAEMLA-----ASSHGLGFMIYDAQEYMDMKSI 240 Query: 556 VLGVLIMCCFVLALNR 571 G+L + L + R Sbjct: 241 YGGILTISVLGLLIER 256 Score = 99.6 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 84/210 (40%), Gaps = 13/210 (6%) Query: 48 IVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIM 107 V P + + + + R+L+ + ++L+ + +R + PI+ + Sbjct: 60 WVSAGPNGDPPYGVLLDIALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISAL 119 Query: 108 QSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEE 167 IP L + ++ F I +F + + + +++ + + R Sbjct: 120 MPIPTLAWTPILLLVFGIDNR--------TTITVVFIAASFEIIYNVVTGIEMMTRKTYW 171 Query: 168 VSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGS 227 V+ S S Q Y+ +P +P L+ + + + W ++A+EM+ G+G Sbjct: 172 VAASMGASRLQTLRYVIIPGILPYLITGLKLGVGYAWRALIAAEMLAASSH-----GLGF 226 Query: 228 YIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 I A + D+ +I +LT+ + L ++ Sbjct: 227 MIYDAQEYMDMKSIYGGILTISVLGLLIER 256 >gi|291458647|ref|ZP_06598037.1| taurine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419180|gb|EFE92899.1| taurine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 242 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 91/233 (39%), Gaps = 13/233 (5%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLGCITMFRVVVLIIIASII 400 +L + W+ + + + F + + ++ LG IT+ RV+ A++I Sbjct: 4 LLAVLWYFAAKWIDRPMILPDFSETMGEFLRDWTEPRVLLNLG-ITLCRVLTGTFYAALI 62 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 +G+ +G+ I P + P + PL + L+ Sbjct: 63 GTVLGLSMGYSETALQLISPIVNSIRQVPIMAWVPLSIVWFGLGEG----PTVFLIFMSA 118 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 + ++ N ++G S+ ++ A S +R II+PG P ++TG A G W + Sbjct: 119 VFPLILNTVSGVSSIDRNYINAAKSMGAGTAAIYRDIIVPGAMPGFLTGLRLAVGAGWMS 178 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 I +E + G G + E+ ++ ++ +++ L +++ + Sbjct: 179 VICAEFIA------TNKGFGYLLIEAQQRLQTSKLYSLMIMSALVGLFIDQLI 225 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 17/205 (8%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+L+ + L V S ++ PI++ ++ +PI+ ++ ++V+F Sbjct: 48 TLCRVLTGTFYAALIGTVLGLSMGYSETALQLISPIVNSIRQVPIMAWVPLSIVWFGLG- 106 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E +F IF S V+ + + + +I R+ ++S + + VP Sbjct: 107 -------EGPTVFLIFMSAVFPLILNTVSGVSSIDRNYINAAKSMGAGTAAIYRDIIVPG 159 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +MPG + + +++ GW V+ +E I G G + A + + M+ Sbjct: 160 AMPGFLTGLRLAVGAGWMSVICAEFIATNK------GFGYLLIEAQQRLQTSKLYSLMIM 213 Query: 248 MLGVIFLYDQ---LLFRPMIVWSNK 269 V DQ LL R + W + Sbjct: 214 SALVGLFIDQLIRLLERKLTGWRFR 238 >gi|330861878|emb|CBX72048.1| taurine transport system permease protein tauC [Yersinia enterocolitica W22703] Length = 296 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 97/295 (32%), Gaps = 19/295 (6%) Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 LR P S + P S + ++ ++W G Sbjct: 7 LRDASLHPKATSLPASEALPPALLNAKRPVRRLPAKKGLWLSIVTLVSVVVLWWAVTALG 66 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWI 408 + + + +++ ++ R+++ ++ A + +P GI + Sbjct: 67 LISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTGIAM 126 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G + + P ++ P + PL+V + LL+ I Sbjct: 127 GLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPITLAA 182 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 +AG + A + + W+ ++ILP P +TG G W+ + +E+ + Sbjct: 183 VAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA 242 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 T GLG + + E + V+ G+ ++ + R + L + Sbjct: 243 ------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 291 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 108/255 (42%), Gaps = 17/255 (6%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 ++ L V +G+I+ L + + + +V P +L Q+ + + R+L Sbjct: 51 TLVSVVVLWWAVTALGLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILI 110 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++ ++ S + VL P+++I + +P L +L V++F Sbjct: 111 ALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG-------- 162 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E + I I+ + +T + + ++ + +R+ S WQ W++ +P ++P ++ Sbjct: 163 ETSKILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILT 222 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF- 253 + + + GW +VA+E+I G+G + A + ++ + + + F Sbjct: 223 GIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFG 276 Query: 254 --LYDQLLFRPMIVW 266 L + + R + W Sbjct: 277 MELSLRAIQRRLTPW 291 >gi|220913559|ref|YP_002488868.1| binding-protein-dependent transporters inner membrane component [Arthrobacter chlorophenolicus A6] gi|219860437|gb|ACL40779.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter chlorophenolicus A6] Length = 320 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 10/221 (4%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P D+V + + L + + R L +IS+ L A+ L P Sbjct: 94 PGPLDVVGQMGVLWGEGKLQEAMWTSLQRGLVGFLISVAIATPVGLLLAQVAPLRRAFGP 153 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 ++ +Q +P + ++ +++F + F +F + ++ + + IP Sbjct: 154 LISGLQVLPSVAWVPAAIIWFGL--------TDATVYFVVFMGAIPSIINGLISGVDQIP 205 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 V + Q + +P ++PG + + + W ++A+E+I VG T+ Sbjct: 206 PQFRRVGTVLGANRLQMALQVVLPAALPGYLGGLKQGWAFSWRSLMAAEIIAVGGTIG-- 263 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 G+GS + D+ ++ A+L +LGV L + L+F P+ Sbjct: 264 FGLGSLLDQGRALSDMTVVMSAILLILGVGILIELLVFAPI 304 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 73/192 (38%), Gaps = 6/192 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R +V +I+ I PVG+ + + P L P+ + P + Sbjct: 119 SLQRGLVGFLISVAIATPVGLLLAQVAPLRRAFGPLISGLQVLPSVAWVPAAIIWFGLTD 178 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ G I+ +I+G P F+ V + + ++LP P Sbjct: 179 AT----VYFVVFMGAIPSIINGLISGVDQIPPQFRRVGTVLGANRLQMALQVVLPAALPG 234 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 Y+ G +W + + +E+ + G GLG+ + + V+ +L++ Sbjct: 235 YLGGLKQGWAFSWRSLMAAEIIAVGGTI--GFGLGSLLDQGRALSDMTVVMSAILLILGV 292 Query: 566 VLALNRFLWHPL 577 + + ++ P+ Sbjct: 293 GILIELLVFAPI 304 >gi|160886481|ref|ZP_02067484.1| hypothetical protein BACOVA_04492 [Bacteroides ovatus ATCC 8483] gi|156108366|gb|EDO10111.1| hypothetical protein BACOVA_04492 [Bacteroides ovatus ATCC 8483] Length = 274 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L I I+ + + I + + L + +T + S+ ++L Sbjct: 41 LFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R +L P+LD+MQ++P +L V++F G V G IF Sbjct: 101 IIGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 85.0 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + V +AW G FT +L + +G T+ V + Sbjct: 39 HVLFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A II +P+G+W P ++P L+ PA V+ V + + Sbjct: 99 ALIIGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|186470976|ref|YP_001862294.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184197285|gb|ACC75248.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 284 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 95/257 (36%), Gaps = 29/257 (11%) Query: 314 KKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI--------- 364 + L R +++ + +R + +W V + WQ++ Sbjct: 2 RALPRLAKMMKHPVDSPIEPVIKIRRARGKWNSYWLTTAVLVICVVLWQAVSMAGIFPAF 61 Query: 365 GYIVNHFTYQDVLYVIWLG----------CITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 +Q + ++ G I+ FR+V+ + A I +P+G+ + + Sbjct: 62 ALPSPVAVWQAFIEIVRNGYGGQSLISDILISCFRIVIGFVGAIAIGVPIGLLMSRNKIV 121 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 I P Q + P + PL+V L ++L++ GT I+ ++G + Sbjct: 122 FDIIDPLLQFVRPVPPLAYIPLLVVWFGIGEL----PKAILILVGTIPVIIIGTMSGVKS 177 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 P VA + + + +R ++LP P T G AW + +E+ + Sbjct: 178 TPPLRISVARTLGASNAQIFRKVVLPSALPEIFTAMRVGIGVAWTCLVAAELIA------ 231 Query: 535 RTTGLGAYIAESTEKGS 551 ++GLG + + + Sbjct: 232 ASSGLGWLVQFAGQALQ 248 Score = 99.6 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 69/174 (39%), Gaps = 14/174 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL + R++ V ++ L ++++ + ++ P+L ++ +P L ++ Sbjct: 84 QSLISDILISCFRIVIGFVGAIAIGVPIGLLMSRNKIVFDIIDPLLQFVRPVPPLAYIPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 VV+F EL I + + + + P V+R+ S Q Sbjct: 144 LVVWFGIG--------ELPKAILILVGTIPVIIIGTMSGVKSTPPLRISVARTLGASNAQ 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 F + +P ++P + M + + W +VA+E+I G+G + A Sbjct: 196 IFRKVVLPSALPEIFTAMRVGIGVAWTCLVAAELIAASS------GLGWLVQFA 243 >gi|262369775|ref|ZP_06063103.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein [Acinetobacter johnsonii SH046] gi|262315843|gb|EEY96882.1| ABC-type nitrate/sulfonate/bicarbonate transport system protein [Acinetobacter johnsonii SH046] Length = 273 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 107/249 (42%), Gaps = 17/249 (6%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS--LPQYASRTTLRMLSAMVISLLF 82 +L+I ++ G E + + LD+ L + +T R+ +I Sbjct: 35 VLLLIACEYLVRAGFIEPYLLPAPSSLWQTFLDLWQADLWMHVWTSTWRVFLGFLIGSAL 94 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 ++A L ++++ L P ++SIP L ++ +++ E + I I Sbjct: 95 ALMFAILVGLNKQVEAFLEPSFSAIKSIPSLAWIPLLLLWLGID--------EASKITLI 146 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + ++ + R L EV+R +RL WQ+ + +P + PG++ + S+S Sbjct: 147 AIGAFFPTYTNTVAAIKGVDRKLIEVARVYRLKYWQQVQQIILPAASPGILTGLRNSLSL 206 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 W F++A+E+I GIG ++ + ++ A++ + + L D ++ + Sbjct: 207 AWMFMIAAELIA------ATQGIGYLLSDGRETSRPDIVILAIILLAVLGKLSDSIM-KA 259 Query: 263 MIVWSNKFR 271 + W ++R Sbjct: 260 IETWLLRWR 268 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 81/214 (37%), Gaps = 17/214 (7%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 WQ+ + + V W RV + +I S + + I +G + + ++ Sbjct: 61 LWQTFLDLWQADLWMHVWTSTW-------RVFLGFLIGSALALMFAILVGLNKQVEAFLE 113 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P + + P+ + PL++ + L+ G + N +A Sbjct: 114 PSFSAIKSIPSLAWIPLLLLWLGI----DEASKITLIAIGAFFPTYTNTVAAIKGVDRKL 169 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 EVA + + W+ + IILP P +TG + AW I +E+ + T G+ Sbjct: 170 IEVARVYRLKYWQQVQQIILPAASPGILTGLRNSLSLAWMFMIAAELIA------ATQGI 223 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G +++ E V+L ++++ + + Sbjct: 224 GYLLSDGRETSRPDIVILAIILLAVLGKLSDSIM 257 >gi|302550270|ref|ZP_07302612.1| glycine betaine ABC transport system permease [Streptomyces viridochromogenes DSM 40736] gi|302467888|gb|EFL30981.1| glycine betaine ABC transport system permease [Streptomyces viridochromogenes DSM 40736] Length = 872 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 93/233 (39%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI ++ ++ T +D L + A T +L A VI+L+ + Sbjct: 49 LLLAGIFAVIAFWLRGTLAGVLTFVGFAF-IDSLELWENAMITLSLVLVATVIALVISIP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S R+ ++ P+LD MQ++P + +L +++F P A I A Sbjct: 108 VGIWAARSDRVSGLVRPVLDFMQTLPAMIYLIPAILFFGTGAP--------AGIVATLIF 159 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + ++L E + +F + + +P ++P ++ + + G Sbjct: 160 ALAPGVRMTELGIRQVDKELVEAADAFGTTPRNTLLRVQLPLALPTVMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + M+ G + AI + ++ A + ++ + D++ Sbjct: 220 MAAIAGMVGTGGLGGD-------VNEAIGQLNVGLGSEAGVAIVILAIYLDRM 265 Score = 83.4 bits (205), Expect = 1e-13, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 6/166 (3%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + V ++ ++ + D L + IT+ V+V +IA +I IPV Sbjct: 49 LLLAGIFAVIAFWLRGTLAGVLTFVGFAFIDSLELWENAMITLSLVLVATVIALVISIPV 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW +S ++P + PA ++ + + + + Sbjct: 109 GIWAARSDRVSGLVRPVLDFMQTLPAMIYLIPAILFFGTGAPAGIVATLIFALA----PG 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 + G + E A +F T + LP P + G Sbjct: 165 VRMTELGIRQVDKELVEAADAFGTTPRNTLLRVQLPLALPTVMAGV 210 >gi|104779498|ref|YP_605996.1| taurine ABC transporter permease [Pseudomonas entomophila L48] gi|95108485|emb|CAK13179.1| taurine ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 279 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ + ++ A++ IPVG+ IG+ + P + P + PL+V Sbjct: 85 GASLGRIGLALLAATLTAIPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGI 144 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ LL+ I G A S T + R++ILP Sbjct: 145 GELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATQAQLIRHVILPSAL 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T+GLG + + + VVLG+L++ Sbjct: 201 PDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGILLIA 254 Query: 564 CFVLALN---RFLWHPLYLY 580 AL R L L + Sbjct: 255 LIAFALEMGLRALQRKLVPW 274 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + R+ A++ + L +R +L P+++ + IP L +L Sbjct: 78 ASLWQHLGASLGRIGLALLAATLTAIPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPL 137 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ EL+ + I+ + + + + + ++S + Q Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATQAQ 189 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 190 LIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 244 DVVVLGILLIALIAFALEMGLRALQRKLVPWH 275 >gi|332163281|ref|YP_004299858.1| taurine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667511|gb|ADZ44155.1| taurine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 296 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 97/295 (32%), Gaps = 19/295 (6%) Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 LR P S + P S + ++ ++W G Sbjct: 7 LRDASLRPKATSLPASEALPPAPLNAKRPVRRLPAKKGLWLSIVTLVSVVVLWWAVTALG 66 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWI 408 + + + +++ ++ R+++ ++ A + +P GI + Sbjct: 67 LISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTGIAM 126 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G + + P ++ P + PL+V + LL+ I Sbjct: 127 GLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPITLAA 182 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 +AG + A + + W+ ++ILP P +TG G W+ + +E+ + Sbjct: 183 VAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA 242 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 T GLG + + E + V+ G+ ++ + R + L + Sbjct: 243 ------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 291 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 108/255 (42%), Gaps = 17/255 (6%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 ++ L V +G+I+ L + + + +V P +L Q+ + + R+L Sbjct: 51 TLVSVVVLWWAVTALGLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILI 110 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++ ++ S + VL P+++I + +P L +L V++F Sbjct: 111 ALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG-------- 162 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E + I I+ + +T + + ++ + +R+ S WQ W++ +P ++P ++ Sbjct: 163 ETSKILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILT 222 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF- 253 + + + GW +VA+E+I G+G + A + ++ + + + F Sbjct: 223 GIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFG 276 Query: 254 --LYDQLLFRPMIVW 266 L + + R + W Sbjct: 277 MELSLRAIQRRLTPW 291 >gi|327439410|dbj|BAK15775.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Solibacillus silvestris StLB046] Length = 253 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 10/195 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + I++FR +IA ++ I +G+ +G P + + P Q+L + P Sbjct: 52 GSLFGHIQISLFRFFTGYLIAVVVAILLGLILGRLPAVWKVLDPVVQVLRPVSPIAWSPF 111 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V N+ +++ + +L + ++ + +AS+F ++ + R Sbjct: 112 IVLWFGIG----NMPAIVIIFIAAFFPVLLSTVSSVKKVDKTYLRIASNFEMSTFETMRK 167 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 IILP FP G A G AW + E+ +GLG I ++ S V+ Sbjct: 168 IILPASFPMIANGLHMALGSAWIFLVAGEMVG------AQSGLGFLIVDARNSLSLDLVM 221 Query: 557 LGVLIMCCFVLALNR 571 ++++ L L++ Sbjct: 222 ACIVVIGVLGLLLDK 236 Score = 111 bits (278), Expect = 4e-22, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 100/245 (40%), Gaps = 15/245 (6%) Query: 13 RRIFPNIFDLLAFVLVIGIINILL-HGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +++ P L ++V ++ H P + + + + SL + + R Sbjct: 5 KKLSPITLGFLLLLVVWQAAIMIGGHQSALFPPPLKVGEALLAIISDGSLFGHIQISLFR 64 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 + +I+++ + + + + VL P++ +++ + + + F V++F Sbjct: 65 FFTGYLIAVVVAILLGLILGRLPAVWKVLDPVVQVLRPVSPIAWSPFIVLWFGIG----- 119 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 + AI IF + + + S S+ + + ++ +F +S ++ + +P S P Sbjct: 120 ---NMPAIVIIFIAAFFPVLLSTVSSVKKVDKTYLRIASNFEMSTFETMRKIILPASFPM 176 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + M++ W F+VA EM+ G+G I A L ++ ++ + + Sbjct: 177 IANGLHMALGSAWIFLVAGEMVG------AQSGLGFLIVDARNSLSLDLVMACIVVIGVL 230 Query: 252 IFLYD 256 L D Sbjct: 231 GLLLD 235 >gi|119898684|ref|YP_933897.1| putative sulfonate transport system permease [Azoarcus sp. BH72] gi|119671097|emb|CAL95010.1| putative sulfonate transport system, permease protein [Azoarcus sp. BH72] Length = 270 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 13/253 (5%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 RF P + + ++ I+ G V + + + Sbjct: 19 TAPRFRLPFAWEPWAF---AAVLVAIWQAIGSALAGSGNPLLPPPLTVLQALWDSLPELG 75 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 + ++ A ++ + +G+ G P ++ PFA++ A P V+ P ++ Sbjct: 76 RGTVSSFLILIPGFGTALVLGVALGLAAGTTPRLARAFFPFAKVAAPVPPTVYIPYAIAV 135 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + +HL+ + ++ G W I N AGA A ++ A + R +I P Sbjct: 136 LPTFHLS----ATFVVFVGAFWPIFQNAAAGALAVEGRHRDNARVLGFGRFETLRKVIFP 191 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P+ +G G ++ V+E+ GLG ++ + +P +V G+L Sbjct: 192 AALPHIFSGMAVGLGFSFILLTVAELFG------ANAGLGRFVQYYADFADYPRMVAGIL 245 Query: 561 IMCCFVLALNRFL 573 A+ L Sbjct: 246 YTGAVTWAVMSLL 258 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 14/252 (5%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P F + V + I L G +P + + + + L + Sbjct: 21 PRFRLPFAWEPWAFAAVLVAIWQAIGSALAGSGNPLLPPPLTVLQALWDSLPELGRGTVS 80 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + L ++ +L+ A + RL P + +P ++ + + Sbjct: 81 SFLILIPGFGTALVLGVALGLAAGTTPRLARAFFPFAKVAAPVPPTVYIPYAIAVL---- 136 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 L+A F +F W + + + + +R ++ + P Sbjct: 137 ----PTFHLSATFVVFVGAFWPIFQNAAAGALAVEGRHRDNARVLGFGRFETLRKVIFPA 192 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + M + + + + +E+ G+G ++ D ++ +L Sbjct: 193 ALPHIFSGMAVGLGFSFILLTVAELFGANA------GLGRFVQYYADFADYPRMVAGILY 246 Query: 248 MLGVIFLYDQLL 259 V + LL Sbjct: 247 TGAVTWAVMSLL 258 >gi|53714621|ref|YP_100613.1| glycine betaine/L-proline transport system permease [Bacteroides fragilis YCH46] gi|253565126|ref|ZP_04842582.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_2_5] gi|265765915|ref|ZP_06093956.1| choline ABC transporter, permease [Bacteroides sp. 2_1_16] gi|52217486|dbj|BAD50079.1| glycine betaine/L-proline transport system permease [Bacteroides fragilis YCH46] gi|251946591|gb|EES86968.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_2_5] gi|263253583|gb|EEZ25048.1| choline ABC transporter, permease [Bacteroides sp. 2_1_16] gi|301164117|emb|CBW23673.1| putative glycine betaine transport system permease protein [Bacteroides fragilis 638R] Length = 274 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L + I ++L + + ++ + L + +T +LS+ ++L Sbjct: 41 LFGIPFYLTIAAMVLLAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R V+ PILD+MQ++P +L V++F + +F Sbjct: 101 IVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGV--------VPGVF 152 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 153 ATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 84.6 bits (208), Expect = 5e-14, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + + +AW G V FT +L + +G T+ V+ + Sbjct: 39 HILFGIPFYLTIAAMVLLAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I+ +P+G+W I P L+ PA V+ V + + Sbjct: 99 ALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGVVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|239978546|ref|ZP_04701070.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces albus J1074] gi|291450442|ref|ZP_06589832.1| glycine betaine transport system permease [Streptomyces albus J1074] gi|291353391|gb|EFE80293.1| glycine betaine transport system permease [Streptomyces albus J1074] Length = 457 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 99/234 (42%), Gaps = 18/234 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84 +L+ GI ++ ++ ++ V L + L A T +L A +++++ + Sbjct: 49 LLLAGIFAVIAWWLRGLLA--GVLSFVGFGLIISMELWDDAMATLSLVLVATLVAIVLSV 106 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 AA+SR + VL P+LD MQ++P + +L V++F G G IFA+ Sbjct: 107 PLGIWAARSRTVSAVLRPVLDFMQTMPGMVYLLPAVIFFGL---GAAPGIVATIIFAMPP 163 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + ++L E + +F + + +P ++ ++ + + G Sbjct: 164 G-----VRMTELGIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALSTIMAGVNQVIMLGL 218 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G+GS + I + ++ A ++++ + D+L Sbjct: 219 SMVVIAGMVGAA-------GLGSSVYEGISQLNIGLGFEAGVSIVILAIYLDRL 265 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 86/282 (30%), Gaps = 19/282 (6%) Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350 + F ++ + L+ + + + I W+ Sbjct: 3 RLPFGEWVDSGVDWLQNNLAWLFDAISAVVKGLDTGINAVLTAPEPLLLAGIFAVIAWW- 61 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + +A +++ G I++ + D T+ V+V ++A ++ +P+GIW Sbjct: 62 LRGLLAGVLSFVGFGLIISMELWDD-------AMATLSLVLVATLVAIVLSVPLGIWAAR 114 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +S+ ++P + P V+ V + + + Sbjct: 115 SRTVSAVLRPVLDFMQTMPGMVYLLPAVIFFGLGAAPGIVATIIF----AMPPGVRMTEL 170 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWG 530 G + E A +F T + LP + G + +++ + Sbjct: 171 GIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALSTIMAGVNQVIMLGLSMVVIAGMVG-- 228 Query: 531 HIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG+ + E + + + + + L+R Sbjct: 229 -----AAGLGSSVYEGISQLNIGLGFEAGVSIVILAIYLDRL 265 >gi|78355721|ref|YP_387170.1| glycine/betaine/L-proline ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218126|gb|ABB37475.1| glycine/betaine/L-proline ABC transporter, permease protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 279 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 94/233 (40%), Gaps = 15/233 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L I + +L + + + L T +L A ++++L Sbjct: 52 LFIPAVALLTWRGTGSRGLGLFALLGLGLVYNMGLWPATVSTIALVLVATLLAVLIGLPL 111 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 AA ++ ++P+LD+MQ++P +L + +F ++AAIF+ Sbjct: 112 GVFAAINKVAYRAIMPVLDVMQTMPAFVYLIPAIPFFGLG--------KVAAIFSTVVFA 163 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + +P +L E + +F + WQ+ L +P + P ++ + ++ Sbjct: 164 MPPVIRLTCLGIRQVPVELVECAEAFGTNRWQRLRKLELPLAAPTIMAGVNQTVMLALSM 223 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 VV + MI G+G + AI+ ++ A + ++ V D+LL Sbjct: 224 VVIAAMI-------GAKGLGGEVWKAIQRLEMGRGFEAGIGIVIVAICLDRLL 269 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 11/198 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V+V ++A +I +P+G++ I P ++ PA V+ + Sbjct: 93 TIALVLVATLLAVLIGLPLGVFAAINKVAYRAIMPVLDVMQTMPAFVYLIPAIPFFGLG- 151 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + ++ G P + E A +F W+ R + LP P Sbjct: 152 ---KVAAIFSTVVFAMPPVIRLTCLGIRQVPVELVECAEAFGTNRWQRLRKLELPLAAPT 208 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G A + +++ + GLG + ++ ++ + + Sbjct: 209 IMAGVNQTVMLALSMVVIAAMIG-------AKGLGGEVWKAIQRLEMGRGFEAGIGIVIV 261 Query: 566 VLALNRFLWHPLYLYGTR 583 + L+R L R Sbjct: 262 AICLDRLLQKIGSRSARR 279 >gi|91772543|ref|YP_565235.1| ABC glycine betaine/L-proline transporter, inner membrane subunit [Methanococcoides burtonii DSM 6242] gi|91711558|gb|ABE51485.1| Glycine betaine ABC transporter permease protein [Methanococcoides burtonii DSM 6242] Length = 276 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 17/236 (7%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + F L+IGI + V ++ I D L + T ++++ ++LL Sbjct: 51 IVFALIIGIAAYFIGRKDLKLAIGSTVGLLLI--DNMGLWVLSMETISLVITSASLALLI 108 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 ++AK+ ++ P+LD+MQ++P +L V++F G V G +FA+ Sbjct: 109 AIPLGIVSAKNEFAYHIIKPLLDLMQTMPSFVYLIPAVIFFGL---GNVPGLVATIVFAM 165 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + +P++L EV+ +F + WQK + +P ++P ++ + + Sbjct: 166 PPA-----IRLTTLGIQQVPKELTEVADAFGSTPWQKLTKVELPTALPSIMAGVNQCIML 220 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + + I+ D+ A L ++ + + D+ Sbjct: 221 SLSMVVIAAMI-------GARGLGYQVLIGIQRVDIGQGFEAGLGIVIIAIILDRF 269 Score = 81.9 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 14/230 (6%) Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 I + ++ A I + + + D + + L T+ V+ +A +I I Sbjct: 51 IVFALIIGIAAYFIGRKDLKLAIGSTVGLLLIDNMGLWVLSMETISLVITSASLALLIAI 110 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GI I+P L+ P+ V+ V ++ + + Sbjct: 111 PLGIVSAKNEFAYHIIKPLLDLMQTMPSFVYLIPAVIFFGLGNVPGLVATIVF----AMP 166 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G P + EVA +F T W+ + LP P + G + + + Sbjct: 167 PAIRLTTLGIQQVPKELTEVADAFGSTPWQKLTKVELPTALPSIMAGVNQCIMLSLSMVV 226 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++ + GLG + ++ + L + + L+RF Sbjct: 227 IAAMIG-------ARGLGYQVLIGIQRVDIGQGFEAGLGIVIIAIILDRF 269 >gi|253573294|ref|ZP_04850637.1| binding-protein-dependent transport system inner membrane component [Paenibacillus sp. oral taxon 786 str. D14] gi|251846822|gb|EES74827.1| binding-protein-dependent transport system inner membrane component [Paenibacillus sp. oral taxon 786 str. D14] Length = 274 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 10/186 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R + ++A I+ IP+G+ IG+ P + P +L A P+ + + Sbjct: 80 ASIVRSLSGFLLALIVAIPLGLIIGWYPVARELLNPILELFRNTAALALLPVFMLLLGIG 139 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +++F W IL N IA + A S ++ + + +ILP P Sbjct: 140 ETSK----IAIVLFACAWPILLNTIAAVGNVDPLLIKSAKSMKLSSSKLFLKVILPASVP 195 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG A GA I +E+ GLG I S P++ G+L + Sbjct: 196 TIFTGIRMAGTGAILVLIAAEMVG------AKEGLGYLITYSQYNFEIPKMYAGILAISL 249 Query: 565 FVLALN 570 L +N Sbjct: 250 LGLIIN 255 Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 98/245 (40%), Gaps = 15/245 (6%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPR-DIVDIVPITLDVHSLPQYASRTTLR 71 R++ L+ L+ L P D++ + + L Q+ S + +R Sbjct: 25 RKLVRQSIVLIGLFLLWEAAPRLGLVDPAFLPPFTDVIRSLVHLITSGELLQHFSASIVR 84 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 LS +++L+ + +L PIL++ ++ L L ++ Sbjct: 85 SLSGFLLALIVAIPLGLIIGWYPVARELLNPILELFRNTAALALLPVFMLLLGIG----- 139 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 E + I + + W + + ++ N+ L + ++S +LS + F + +P S+P Sbjct: 140 ---ETSKIAIVLFACAWPILLNTIAAVGNVDPLLIKSAKSMKLSSSKLFLKVILPASVPT 196 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + M+ +G ++A+EM+ + G+G I + ++ + +L + + Sbjct: 197 IFTGIRMAGTGAILVLIAAEMVGAKE------GLGYLITYSQYNFEIPKMYAGILAISLL 250 Query: 252 IFLYD 256 + + Sbjct: 251 GLIIN 255 >gi|254466399|ref|ZP_05079810.1| binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium Y4I] gi|206687307|gb|EDZ47789.1| binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium Y4I] Length = 421 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ + +I+ IP+G +G P + + P PLV+ + Sbjct: 230 SLARVIAGFVAGAIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIWE 289 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 +L+ W + AG S A S + W+ R++I+P P Sbjct: 290 TGK----IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQIMRHVIVPNSLPE 345 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 TGA A G W + +E+ + Sbjct: 346 IFTGARVAMGVCWGTVVAAELVA 368 Score = 116 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 8/156 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+ + R+++ V + S PI++ M+ +P L + Sbjct: 222 SLWQHLGWSLARVIAGFVAGAIVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV 281 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W MT + + + + S S WQ Sbjct: 282 IIWFGIWETGK--------IVLLFLAALWIMTIAARAGVSGVNISKIHAAYSLGASKWQI 333 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 ++ VP S+P + ++M W VVA+E++ Sbjct: 334 MRHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAA 369 >gi|164687918|ref|ZP_02211946.1| hypothetical protein CLOBAR_01563 [Clostridium bartlettii DSM 16795] gi|164602331|gb|EDQ95796.1| hypothetical protein CLOBAR_01563 [Clostridium bartlettii DSM 16795] Length = 256 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 95/253 (37%), Gaps = 17/253 (6%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDV------LYVIWLGC 384 ++ + Y + + F + + W Y + Sbjct: 1 MIRRVHERLKGYYIFVLVFILWIVICKLEIWNQYIMPTPQKVYTTFKKMIIDGSIFENIF 60 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ R+ + I+SI+ IP+G+ G + + + + + P P+++ Sbjct: 61 ISLKRIFIGYFISSILAIPLGMLFGCKSKLYKFFKLLLEFMRCTPPLALIPMLILWFGIG 120 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +++I + + I N ++G EV F+ + + + II+P Sbjct: 121 EKSK----IIIIILASFFPIFLNTLSGIKNCDPKLIEVGKVFNFSNFEIFSKIIIPNALV 176 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G G ++ A I +E+ + ++GLG I++ V++G+L++ Sbjct: 177 DIFVGLNLGLGYSFRAIIGAELIA------ASSGLGYLISDGRSMSRTDVVLVGILVIGF 230 Query: 565 FVLALNRFLWHPL 577 + ++ F++ + Sbjct: 231 LGI-ISEFIFRKI 242 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 92/244 (37%), Gaps = 15/244 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +L F+L I I + + P+ + + S+ + + R+ IS + Sbjct: 16 VLVFILWIVICKLEIWNQYIMPTPQKVYTTFKKMIIDGSIFENIFISLKRIFIGYFISSI 75 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 L +L +L+ M+ P L + +++F K+I LA+ F Sbjct: 76 LAIPLGMLFGCKSKLYKFFKLLLEFMRCTPPLALIPMLILWFGIGEKSKIIIIILASFFP 135 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF + + N L EV + F S ++ F + +P ++ + + + + Sbjct: 136 IF--------LNTLSGIKNCDPKLIEVGKVFNFSNFEIFSKIIIPNALVDIFVGLNLGLG 187 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 + ++ +E+I G+G I+ +L +L + + + + +FR Sbjct: 188 YSFRAIIGAELIAASS------GLGYLISDGRSMSRTDVVLVGILVIGFLGIISE-FIFR 240 Query: 262 PMIV 265 +I Sbjct: 241 KIIN 244 >gi|318607766|emb|CBY29264.1| taurine transport system permease protein TauC [Yersinia enterocolitica subsp. palearctica Y11] Length = 296 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 97/295 (32%), Gaps = 19/295 (6%) Query: 295 LRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG 354 LR P S + P + + ++ ++W G Sbjct: 7 LRDASLRPKATSLPASEALPPAPLNAKRPVRRLPAKKGLWLNIVTLVSVVVLWWAVTALG 66 Query: 355 VAIGIAWQSIGYIVNHFTYQDVLYVIWLG------CITMFRVVVLIIIASIIWIPVGIWI 408 + + + +++ ++ R+++ ++ A + +P GI + Sbjct: 67 LISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTGIAM 126 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 G + + P ++ P + PL+V + LL+ I Sbjct: 127 GLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPITLAA 182 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 +AG + A + + W+ ++ILP P +TG G W+ + +E+ + Sbjct: 183 VAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA 242 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 T GLG + + E + V+ G+ ++ + R + L + Sbjct: 243 ------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 291 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 108/255 (42%), Gaps = 17/255 (6%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 ++ L V +G+I+ L + + + +V P +L Q+ + + R+L Sbjct: 51 TLVSVVVLWWAVTALGLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILI 110 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 A++ ++ S + VL P+++I + +P L +L V++F Sbjct: 111 ALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG-------- 162 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E + I I+ + +T + + ++ + +R+ S WQ W++ +P ++P ++ Sbjct: 163 ETSKILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILT 222 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF- 253 + + + GW +VA+E+I G+G + A + ++ + + + F Sbjct: 223 GIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFG 276 Query: 254 --LYDQLLFRPMIVW 266 L + + R + W Sbjct: 277 MELSLRAIQRRLTPW 291 >gi|261339268|ref|ZP_05967126.1| hypothetical protein ENTCAN_05506 [Enterobacter cancerogenus ATCC 35316] gi|288319127|gb|EFC58065.1| aliphatic sulfonates ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 263 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390 R + +V +A W S + + + + + + I+ +R Sbjct: 10 SRAAPWFLPVGIVLVWQLASSAGWLSTRILPSPEGVVEAFWSLSVSGELWQHLAISSWRA 69 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + I I + +G+ G + Q+L P PLV+ Sbjct: 70 AIGFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DES 125 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G E+A S+ ++G+ + ++ILPG P + G Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRTIDRGLVEMARSYGLSGFALFTHVILPGALPSIMVGV 185 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 186 RFALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 103/264 (39%), Gaps = 18/264 (6%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAM 76 F + VLV + + + V +L V L Q+ + ++ R Sbjct: 14 PWFLPVGIVLVWQLASSAGWLSTRILPSPEGVVEAFWSLSVSGELWQHLAISSWRAAIGF 73 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 I ++ SR +L + +++++P L + +++F E Sbjct: 74 SIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 A IF + ++ + + + + I R L E++RS+ LSG+ F ++ +P ++P ++ + Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRTIDRGLVEMARSYGLSGFALFTHVILPGALPSIMVGV 185 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 ++ W ++ +E I GIG A + ++ A++ + L D Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD 239 Query: 257 ---QLLFRPMIVWSNKFRLERTTG 277 Q L R + W+ + + Sbjct: 240 VSAQWLERSWLRWNPAYSPQEAKA 263 >gi|290958242|ref|YP_003489424.1| binding-protein-dependent transporter [Streptomyces scabiei 87.22] gi|260647768|emb|CBG70873.1| putative binding-protein-dependent transport system [Streptomyces scabiei 87.22] Length = 324 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 13/201 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R++ ++A+++ + VGI + + P +++ PA P+ + Sbjct: 82 SLTRILTGFLLAAVLGVAVGILVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLFP--- 138 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + + +L + A ++E + R ++LPG P Sbjct: 139 -SNEQGIVFITFTAAFFPVLVSTRHAVRALTPVWEEAVRTMGGGRGRILASVVLPGALPG 197 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G G +W I +E+ S + G+G + ++P V +G+ + Sbjct: 198 IFGGLSVGIGVSWICVISAEMISGQY------GVGYRTWQDYTVVNYPGVFVGMATIGVL 251 Query: 566 VLALN---RFLWHPLYLYGTR 583 + + L + R Sbjct: 252 GWLTSTAVELVGRRLTHWLPR 272 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 85/219 (38%), Gaps = 17/219 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+L+ +++ + L A+SR +L P+L++++ IP + + ++ F Sbjct: 82 SLTRILTGFLLAAVLGVAVGILVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLF---- 137 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E +F FT+ + + S ++ + EE R+ + + +P Sbjct: 138 ----PSNEQGIVFITFTAAFFPVLVSTRHAVRALTPVWEEAVRTMGGGRGRILASVVLPG 193 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++PG+ + + + W V+++EMI G+G + + M T Sbjct: 194 ALPGIFGGLSVGIGVSWICVISAEMISG------QYGVGYRTWQDYTVVNYPGVFVGMAT 247 Query: 248 MLGVIFLYDQ---LLFRPMIVWSNKFRLERTTGIYPADS 283 + + +L L+ R + W + T + Sbjct: 248 IGVLGWLTSTAVELVGRRLTHWLPRTSAAPATRPRGPRT 286 >gi|23500901|ref|NP_700341.1| taurine ABC transporter permease [Brucella suis 1330] gi|81750864|sp|Q8FUN2|Y4188_BRUSU RecName: Full=Probable ABC transporter permease protein BRA1188 gi|23464571|gb|AAN34346.1| taurine ABC transporter, permease protein [Brucella suis 1330] Length = 250 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 85/247 (34%), Gaps = 13/247 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +S+ + I + ++ + + + T ++ ++ RV+ ++ Sbjct: 13 LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVG +G+ S I+P+ Q P PL + + ++ Sbjct: 73 LAIPVGFLMGWYRIARSPIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + G + A + +I+P P+ + G G AW Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLW---HP 576 + +E+ + +GLG + ++ P + + ++ + L ++R L Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRR 242 Query: 577 LYLYGTR 583 L + R Sbjct: 243 LTQWQER 249 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 17/245 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + G + G P D+++ L L + R+LS V+ + Sbjct: 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L R + P + + IP L + +V E IF IF + Sbjct: 79 FLMGWYRIARSPIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + YQ + ++ R L +R F + VP S+P ++ + + + W V Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264 VA+E+I G+G + A DL I +++T+ + D+LL R + Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244 Query: 265 VWSNK 269 W + Sbjct: 245 QWQER 249 >gi|152984113|ref|YP_001351148.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150959271|gb|ABR81296.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 283 Score = 121 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L++ I+ + +P ++ + + L +T ML A IS+L Sbjct: 54 LLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVATFISVLIGIPL 113 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+S RL VL+P+LDIMQ++P +L ++ F ++ AIFA Sbjct: 114 GILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + ++ E +F + WQ+ + + +P ++P ++ + + Sbjct: 166 APPLIRLTDLGIRQVDNEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + + I+ ++ L A L ++ + + D++ Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRI 270 Score = 77.3 bits (189), Expect = 7e-12, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 86/245 (35%), Gaps = 17/245 (6%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387 L + + +L + ++ + IAW + ++ +L+++ + T+ Sbjct: 37 LWAIVNLEGLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTL 96 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 ++V I+ +I IP+GI + + + P ++ P+ V+ V+ Sbjct: 97 ALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + + ++ G N+ E ++F W+ + LP P + Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDNEVMEAVNAFGANRWQQLFGVQLPLALPSIM 212 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G A + +++ + GLG + + + + + L + + Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGKGLEAGLAIVILAV 265 Query: 568 ALNRF 572 ++R Sbjct: 266 VIDRI 270 >gi|222102562|ref|YP_002539601.1| sulfate ester transporter permease protein [Agrobacterium vitis S4] gi|221739163|gb|ACM39896.1| sulfate ester transporter permease protein [Agrobacterium vitis S4] Length = 261 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 87/199 (43%), Gaps = 13/199 (6%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + LR LS I + + TL ++ +++P + ++ I +L ++ Sbjct: 62 GLAGELGASLLRNLSGFGIGAVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPLI 121 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++F K++ LAA + + + + +PRDL EV R+ R S Q+ Sbjct: 122 SIWFGFGEQAKIVFVALAAFI--------PIALNTFDGIRQVPRDLIEVGRALRFSPRQR 173 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + + +P ++P + + + + W V +E + PGIG + + D+ Sbjct: 174 IFTIYLPSALPMIATGVHLGLIYSWLATVGAEYFLAVG-----PGIGGLVIAGRERFDMS 228 Query: 240 AILYAMLTMLGVIFLYDQL 258 ++ ++ + V F++++L Sbjct: 229 LVMVGVIILGLVGFIFNRL 247 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 9/189 (4%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R + I +++ I G + + P L + PL+ + Sbjct: 68 GASLLRNLSGFGIGAVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPLISIWFGF 127 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + I N G P D EV + + + I LP Sbjct: 128 G----EQAKIVFVALAAFIPIALNTFDGIRQVPRDLIEVGRALRFSPRQRIFTIYLPSAL 183 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TG +W A++ +E G+G + E+ V++GV+I+ Sbjct: 184 PMIATGVHLGLIYSWLATVGAEYFL-----AVGPGIGGLVIAGRERFDMSLVMVGVIILG 238 Query: 564 CFVLALNRF 572 NR Sbjct: 239 LVGFIFNRL 247 >gi|29833258|ref|NP_827892.1| glycine betaine ABC transport system permease protein [Streptomyces avermitilis MA-4680] gi|29610380|dbj|BAC74427.1| putative glycine betaine ABC transport system permease protein [Streptomyces avermitilis MA-4680] Length = 871 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 95/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI+ ++ ++ T+ +D L + A T +L A VI+L+ + Sbjct: 49 LLLAGILAVIAFWLRGTSAGVLTFVGFAF-IDSLELWEDAMVTLSLVLVATVIALVVSVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S R+ ++ P+LD MQ++P + +L +++F P A I A Sbjct: 108 VGIWAARSDRVSSIVRPVLDFMQTLPAMIYLIPAILFFGTGAP--------AGIVATLIF 159 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + ++L E + +F + + +P ++P ++ + + G Sbjct: 160 ALAPGVRMTELGIRQVDKELVEAADAFGTTPRNILLRVQLPLALPTVMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + M+ G + AI + ++ A + ++ + D++ Sbjct: 220 MAAIAGMVGTGGLGGD-------VNEAIGQLNVGLGSEAGVAIVILAIYLDRM 265 Score = 81.1 bits (199), Expect = 5e-13, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 78/220 (35%), Gaps = 12/220 (5%) Query: 291 KTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFC 350 + F ++ + + +S +T+ + F + LQ ++ +L + F Sbjct: 3 RIPFGDWVNDTVDWLLNHMSWLFD-FFKTVFLGAFDGIDAVLQAPQPLLLAGILAVIAFW 61 Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGF 410 + A + + +I + ++D +T+ V+V +IA ++ +PVGIW Sbjct: 62 LRGTSAGVLTFVGFAFIDSLELWED-------AMVTLSLVLVATVIALVVSVPVGIWAAR 114 Query: 411 RPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIA 470 +SS ++P + PA ++ + + + + + Sbjct: 115 SDRVSSIVRPVLDFMQTLPAMIYLIPAILFFGTGAPAGIVATLIFALA----PGVRMTEL 170 Query: 471 GASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 G + E A +F T + LP P + G Sbjct: 171 GIRQVDKELVEAADAFGTTPRNILLRVQLPLALPTVMAGV 210 >gi|225575131|ref|ZP_03783741.1| hypothetical protein RUMHYD_03220 [Blautia hydrogenotrophica DSM 10507] gi|225037690|gb|EEG47936.1| hypothetical protein RUMHYD_03220 [Blautia hydrogenotrophica DSM 10507] Length = 299 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 74/190 (38%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ + A II +P+G+ +G+ + I+P +L+ P + PLVV + Sbjct: 106 LASLQVALSGFCAAIIIGVPLGLLMGWWTYADRFIRPIFELVRPVPPIAWIPLVVVWMGV 165 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 +L++ F + N G +V+ +F + + + +P Sbjct: 166 GLK----AKALIIFFTAFVPCVINSYTGIKLTNKTLIDVSRTFGASNREIFWKVGVPSSL 221 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G A G +W+ + +E+ + T GLG I V++G++++ Sbjct: 222 PMVFAGIRVALGNSWSTLVAAEMLA------ATAGLGYMIQIGRTVARPDIVIVGMVVIG 275 Query: 564 CFVLALNRFL 573 L+ L Sbjct: 276 AIGAVLSLIL 285 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 100/261 (38%), Gaps = 23/261 (8%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQET-TVPRDIVDIVPITL-----DVHSLPQYASRT 68 IF + +L +++ + + ++ P I+D + + D + L + Sbjct: 49 IFLSAAGILTVLVIWQLAVVTGLVNEKMLPAPTKILDTLIYKIGNKAPDGNVLGIDILAS 108 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 LS +++ L + PI ++++ +P + ++ VV+ Sbjct: 109 LQVALSGFCAAIIIGVPLGLLMGWWTYADRFIRPIFELVRPVPPIAWIPLVVVWMGVGLK 168 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K + IF + + Y + + L +VSR+F S + FW +GVP S Sbjct: 169 AKAL--------IIFFTAFVPCVINSYTGIKLTNKTLIDVSRTFGASNREIFWKVGVPSS 220 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + +++ W +VA+EM+ G+G I + ++ M+ + Sbjct: 221 LPMVFAGIRVALGNSWSTLVAAEMLA------ATAGLGYMIQIGRTVARPDIVIVGMVVI 274 Query: 249 LGVIFLYDQLLFR---PMIVW 266 + + +L R + W Sbjct: 275 GAIGAVLSLILSRAEKYFLRW 295 >gi|253990652|ref|YP_003042008.1| glycine betaine transporter membrane protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782102|emb|CAQ85266.1| glycine betaine/l-proline transport system permease protein prow [Photorhabdus asymbiotica] Length = 361 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 15/181 (8%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++ ++S R ++ P+LD MQ+ P +L V+ F G V G + Sbjct: 163 FCIIIGLPLGLWLSRSERAAKIIRPMLDAMQTTPAFVYLVPIVMLFG---IGNVPGVIVT 219 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 IFA + + + +P DL E + SF S Q + + +P +MP ++ + Sbjct: 220 IIFA-----LPPIVRLTILGIKQVPTDLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVN 274 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++ VV + MI VG G+G + I D+ + ++ + L D+ Sbjct: 275 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAILLDR 327 Query: 258 L 258 L Sbjct: 328 L 328 Score = 91.5 bits (226), Expect = 4e-16, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLII-----IASIIWIPVG 405 V + IAWQ G + + ++ + +G + V + + II +P+G Sbjct: 113 VAIMLFALIAWQLSGIGMGIASLASLIVIGAIGAWSEAMVTLALALTSLLFCIIIGLPLG 172 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 +W+ + I+P + PA V+ +V N+ ++ I I+ Sbjct: 173 LWLSRSERAAKIIRPMLDAMQTTPAFVYLVPIVMLFGIG----NVPGVIVTIIFALPPIV 228 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 I G P D E A SF + + + LP P + G A + +++ Sbjct: 229 RLTILGIKQVPTDLIEAAESFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIAS 288 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G + + + L+R Sbjct: 289 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGVGIVILAILLDRL 328 >gi|255010825|ref|ZP_05282951.1| glycine betaine/L-proline transport system permease [Bacteroides fragilis 3_1_12] gi|313148627|ref|ZP_07810820.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137394|gb|EFR54754.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 274 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L + I ++L + + ++ + L + +T +LS+ ++L Sbjct: 41 LFGIPFYLTIAAMVLLAWMKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R V+ PILD+MQ++P +L V++F + +F Sbjct: 101 IVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGV--------VPGVF 152 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 153 ATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 83.8 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + + +AW G V FT +L + +G T+ V+ + Sbjct: 39 HILFGIPFYLTIAAMVLLAWMKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I+ +P+G+W I P L+ PA V+ V + + Sbjct: 99 ALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGVVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|229590252|ref|YP_002872371.1| putative integral membrane transport protein [Pseudomonas fluorescens SBW25] gi|229362118|emb|CAY49020.1| putative integral membrane transport protein [Pseudomonas fluorescens SBW25] Length = 274 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 110/272 (40%), Gaps = 23/272 (8%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-----ETTVPRDIVDIVPITLDVHSLP 62 P I+R +P L +I ++ ++ + + P +I + L +L Sbjct: 14 PVAINRSAWPRRLKGLVVPALILLVLEVVVRVGWLPSYQMPAPSEIA-VTLTDLAEGALW 72 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ S + R+L I V+A SR L P ++SIP L ++ +++ Sbjct: 73 KHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLW 132 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 E + I I + + + ++ +I R L EV + + + + Sbjct: 133 LGID--------ETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFNRRRLVRR 184 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P ++PGL + +S W F+VA+E+I G+G ++ + +L Sbjct: 185 ILLPAALPGLFTGLRSGLSLAWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVL 238 Query: 243 YAMLTMLGVIFLYDQLLF---RPMIVWSNKFR 271 A++ + + + D LL + + W + F+ Sbjct: 239 AAIIVLALLGKVSDGLLAALEKRCLAWRDTFQ 270 Score = 106 bits (266), Expect = 8e-21, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 93/264 (35%), Gaps = 16/264 (6%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 + + P + +R+ ++ +V V + + W + Sbjct: 2 MTSKTQALPLAAPVAINRSAWPRRLKGLVVPALILLVLEVVVRVGWLPSYQMPAPSEIAV 61 Query: 376 VLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 L + G + ++ RV++ I + + + W+G + ++P L + P Sbjct: 62 TLTDLAEGALWKHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIP 121 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + + PL++ + + +L+ G + + N +A EV + Sbjct: 122 SLAWVPLLLLWLGIDETSK----IVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFN 177 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEK 549 R R I+LP P TG + AW + +E+ + T GLG +++ E Sbjct: 178 RRRLVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIA------ATKGLGYLLSDGRET 231 Query: 550 GSFPEVVLGVLIMCCFVLALNRFL 573 V+ ++++ + L Sbjct: 232 SRPDIVLAAIIVLALLGKVSDGLL 255 >gi|124485204|ref|YP_001029820.1| hypothetical protein Mlab_0377 [Methanocorpusculum labreanum Z] gi|124362745|gb|ABN06553.1| binding-protein-dependent transport systems inner membrane component [Methanocorpusculum labreanum Z] Length = 253 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 9/189 (4%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++++RV + IIA +I +P+GI +G P + Q+L P + PL ++ Sbjct: 59 VSIYRVTLGFIIACVIAVPLGIILGRYPVLEQFSDSLIQILRPIPPMAWVPLSLAWFGLG 118 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + +++ G + IL N I G + E A + + +I+P P Sbjct: 119 LT----PILFIIVIGCIFPILVNTIDGVKRVKRSWVETAKIYQANERQIITKVIIPAAGP 174 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G G AW + + +E+ +GLG I + G V+ G++ + Sbjct: 175 AIWNGLRVGFGIAWMSVVAAEMMPG-----TVSGLGYLIMYTYNWGQVQMVIAGMIAIGI 229 Query: 565 FVLALNRFL 573 +A+++F Sbjct: 230 IGIAMDQFF 238 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 75/201 (37%), Gaps = 13/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL + + + R+ +I+ + + + L ++ I++ IP + ++ Sbjct: 51 GSLVENSWVSIYRVTLGFIIACVIAVPLGIILGRYPVLEQFSDSLIQILRPIPPMAWVPL 110 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ +F +F I ++ + + + + R E ++ ++ + Q Sbjct: 111 SLAWFGLGLTP--------ILFIIVIGCIFPILVNTIDGVKRVKRSWVETAKIYQANERQ 162 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P + P + + + W VVA+EM+ + G+G I + Sbjct: 163 IITKVIIPAAGPAIWNGLRVGFGIAWMSVVAAEMMPG-----TVSGLGYLIMYTYNWGQV 217 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ M+ + + DQ Sbjct: 218 QMVIAGMIAIGIIGIAMDQFF 238 >gi|222148899|ref|YP_002549856.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221735885|gb|ACM36848.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 304 Score = 121 bits (305), Expect = 3e-25, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 16/237 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 D V++ + I+ + + + + + + L Q T + + ++ Sbjct: 66 DTPWIVMIFALAAIVYGVSRNWRITLGTALAM-VLIGMAGLWQDTMITLAMVTVCTLCAV 124 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R L P+LD+MQ++P +L V+ F GKV G I+ Sbjct: 125 VIGIPLGIWMARSDRAQSTLNPVLDVMQTMPSFVYLIPVVMIFG---IGKVPGLIAVVIY 181 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 AI + + + R+ E + +F S QK + + +P ++P ++ + ++ Sbjct: 182 AIA-----PIIRLTNLGIRLVSREAIEAADAFGSSERQKLFNVQIPLALPNIMAGINQTI 236 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI VG G+G + AI Q L ++ + ++D+ Sbjct: 237 MMSLAMVVIASMIGVG-------GLGKNVLQAITNQFFTIGLLNGFALVAIAIIFDR 286 Score = 78.0 bits (191), Expect = 5e-12, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 76/231 (32%), Gaps = 11/231 (4%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 + + + + + W+ + + IT+ V V + A +I Sbjct: 67 TPWIVMIFALAAIVYGVSRNWRITLGTALAMVLIGMAGLWQDTMITLAMVTVCTLCAVVI 126 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 IP+GIW+ S + P ++ P+ V+ VV + + + + I Sbjct: 127 GIPLGIWMARSDRAQSTLNPVLDVMQTMPSFVYLIPVVMIFGIGKVPGLIAVVIYAIA-- 184 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 I+ G + E A +F + + + +P P + G + Sbjct: 185 --PIIRLTNLGIRLVSREAIEAADAFGSSERQKLFNVQIPLALPNIMAGINQTIMMSLAM 242 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + G GLG + ++ F +L + + +R Sbjct: 243 VVIASMIGVG-------GLGKNVLQAITNQFFTIGLLNGFALVAIAIIFDR 286 >gi|221308723|ref|ZP_03590570.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|221313046|ref|ZP_03594851.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317971|ref|ZP_03599265.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. JH642] gi|221322245|ref|ZP_03603539.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. SMY] gi|321314608|ref|YP_004206895.1| aliphatic sulfonate ABC transporter permease [Bacillus subtilis BSn5] gi|320020882|gb|ADV95868.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis BSn5] Length = 275 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 97/277 (35%), Gaps = 16/277 (5%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + L +T P + + I + V+ G+ + A + Sbjct: 3 AEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTI 62 Query: 370 HFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 T++++ + I+++R + ++ + + + +GI GF + P Q+L Sbjct: 63 VLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLR 122 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P PL + + + LL+ G + + N G EVA Sbjct: 123 TVPHLAVTPLFILWFGF----DEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVL 178 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + +ILP P + G + G AW +V+E+ ++G+G I ++ Sbjct: 179 EFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMG------SSSGVGYMIMDA 232 Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + +V G++I + R L L + Sbjct: 233 RQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKW 269 Score = 116 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 18/253 (7%) Query: 23 LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + + +I L + P IV + L + + R ++ Sbjct: 36 AVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAG 95 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + LA S+R + L P L +++++P L +++F K++ L A F Sbjct: 96 LGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFP 155 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 ++ + + + + L EV+R Q+ + +P ++P ++ + +S+ Sbjct: 156 VY--------INTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLG 207 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W +V +E++ G+G I A + + ++ V L D +L Sbjct: 208 IAWLGLVVAELMGSSS------GVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRL 261 Query: 259 LFRPMIVWSNKFR 271 L R ++ W N + Sbjct: 262 LERKLLKWRNSYE 274 >gi|167031249|ref|YP_001666480.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166857737|gb|ABY96144.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 534 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 75/548 (13%), Positives = 177/548 (32%), Gaps = 72/548 (13%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + L+ G+ + ++ +V + L + + R+ + + + Sbjct: 41 VLIALLWGVASRQHWMSEQILPAPALVWQSALEFGAGELWGHLWISLQRLFWGLAVGIGS 100 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + SR+ +++P + IP L ++ +++F K++ A + + Sbjct: 101 GLLLGVWLGASRQAQTLVLPTFVALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV 160 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 T + + L E + + RL F L +P ++P + + ++++ Sbjct: 161 --------TLHTLVGVRDAQPKLREAAAALRLPRHLLFLRLLLPAALPAFLTGVRLALAT 212 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP 262 GW ++A E++ + GIG + + L +L +L VI L +L R Sbjct: 213 GWTSLLAVELLASSE------GIGYLMVWGRQLFMLDLVLLCIL----VIGLVGAVLERS 262 Query: 263 MIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNN-VKKLCRTLG 321 ++ + ++ L + W S L L Sbjct: 263 FSALEHRLLYWPQPATGEHQRGAVPRGWQSLLLPLAILALWQASSSFGWVDPNILTSPLE 322 Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381 V+R ++ G+A G Q++ Sbjct: 323 VLR-------------------------TLLVGLADGSLPQAL----------------- 340 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 +++ R + +++ + G+ +G + P L + PL+ + Sbjct: 341 --LLSLQRTLTGLLLGGGAGLLAGLVLGLSRNAERLFGPSLTALRQVALFAWVPLLTAWF 398 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 ++ + + +L G + E A + + W+ R ++LPG Sbjct: 399 GLGEGAKHV----FVGLAAFFPLLIATQRGIAGLSPQLGEAARTLRLGLWQRLRLLVLPG 454 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 P G + AW +I +E G+ + + + + +V+ +L+ Sbjct: 455 AAPGIFAGLRLSLIYAWLGTIGAEYFMPSD-----GGIASLMIGAQQLFRMDQVMAAMLL 509 Query: 562 MCCFVLAL 569 + L Sbjct: 510 IGLVGALL 517 Score = 101 bits (252), Expect = 4e-19, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 14/230 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 T P +++ + + L SLPQ + R L+ +++ + + SR + Sbjct: 317 LTSPLEVLRTLLVGLADGSLPQALLLSLQRTLTGLLLGGGAGLLAGLVLGLSRNAERLFG 376 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P L ++ + + ++ +F K + LAA F + + + + + Sbjct: 377 PSLTALRQVALFAWVPLLTAWFGLGEGAKHVFVGLAAFF--------PLLIATQRGIAGL 428 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E +R+ RL WQ+ L +P + PG+ + +S+ W + +E + D Sbjct: 429 SPQLGEAARTLRLGLWQRLRLLVLPGAAPGIFAGLRLSLIYAWLGTIGAEYFMPSD---- 484 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 GI S + A + + ++ AML + V L L + + + ++R Sbjct: 485 -GGIASLMIGAQQLFRMDQVMAAMLLIGLVGALLGTL-GQRLESRATRWR 532 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 87/263 (33%), Gaps = 28/263 (10%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 G + ++ S +RV L ++ GVA W S + Sbjct: 15 GPFAAQGRSHRDRILSVERVLPWLLPVLIALLWGVASRQHWMSEQILPAPALVWQSALEF 74 Query: 381 WLGC------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA---- 430 G I++ R+ + + + +G+W+G + + P F A Sbjct: 75 GAGELWGHLWISLQRLFWGLAVGIGSGLLLGVWLGASRQAQTLVLP------TFVALAQI 128 Query: 431 --NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 + PL + L + L ++ + + G +E A++ + Sbjct: 129 PTLAWIPLFMLFFGIGELLKLVVLVKAVVVPV----TLHTLVGVRDAQPKLREAAAALRL 184 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + ++LP P ++TG A W + + E+ + + G+G + + Sbjct: 185 PRHLLFLRLLLPAALPAFLTGVRLALATGWTSLLAVELLA------SSEGIGYLMVWGRQ 238 Query: 549 KGSFPEVVLGVLIMCCFVLALNR 571 V+L +L++ L R Sbjct: 239 LFMLDLVLLCILVIGLVGAVLER 261 >gi|319443151|ref|ZP_07992307.1| binding-protein-dependent transport systems inner membrane component [Corynebacterium variabile DSM 44702] Length = 274 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 106/279 (37%), Gaps = 25/279 (8%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLY 378 ++ + + L I + +A ++ + F + DV++ Sbjct: 5 APRTAGKRKHRSVIPAPVSRKKYLTIAAASFIVVLAAWWLITALELVDATFLPSPADVVH 64 Query: 379 VIWLGC----------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 VI I+++RV+V ++A ++ +P+G++ G P + I+P + Sbjct: 65 VISDTATNGQLWSDMRISVWRVMVGYVLAVVLAVPIGVFAGSSPRAEAAIEPLTDFIRYM 124 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P F PL + V L++ GT + ++ V P ++ + ++ + Sbjct: 125 PVVAFVPLTIIWVGTEDSQK----FLIIWLGTFFQMVLMVADAVRQVPRSYQNLGATLGM 180 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 +I++P P G AW+ +V+E+ + ++G+G I ++ Sbjct: 181 GRLSILSHIVVPAALPRIWDTLRLCLGWAWSWLVVAELVA------ASSGMGYRITQAQR 234 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGTRC 584 + ++ V+++ L ++ + ++ Y Sbjct: 235 FLATDTIIAYVIVLGLLGLIFDQIMRAAGRRMFRYLEAR 273 Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 94/238 (39%), Gaps = 14/238 (5%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 ++ I + L P D+V ++ T L + R++ V++++ Sbjct: 36 IVVLAAWWLITALELVDATFLPSPADVVHVISDTATNGQLWSDMRISVWRVMVGYVLAVV 95 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 A S R + P+ D ++ +P++ F+ T+++ K + Sbjct: 96 LAVPIGVFAGSSPRAEAAIEPLTDFIRYMPVVAFVPLTIIWVGTEDSQKFL--------I 147 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + M + ++ +PR + + + + ++ VP ++P + + + + Sbjct: 148 IWLGTFFQMVLMVADAVRQVPRSYQNLGATLGMGRLSILSHIVVPAALPRIWDTLRLCLG 207 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W ++V +E++ G+G I A + I+ ++ + + ++DQ++ Sbjct: 208 WAWSWLVVAELVAASS------GMGYRITQAQRFLATDTIIAYVIVLGLLGLIFDQIM 259 >gi|294676941|ref|YP_003577556.1| ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294475761|gb|ADE85149.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 274 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 14/269 (5%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW 381 +R P + +L ++W G+ + G ++ Q ++W Sbjct: 16 RLRKDIPHWLFTSAGVVFPALLLLMWWLVTEFGLVKPLFLPGPGDVLAEGVRQAREGILW 75 Query: 382 LGC-ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++++R+ + A+++ +PVGI +G I ++PF + P PL + Sbjct: 76 ADASVSIYRICAGWLAATVLAVPVGILMGNFRLIEGALEPFVSTIRYMPVVALIPLTILW 135 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 L++ GT + + V+ + + + IILP Sbjct: 136 AGIGDGQK----ILILFLGTFFQQVLMVMDNVKTIDMNLIRAGQTLGFSNREILIRIILP 191 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P G W +V+E+ + GLG I ++ + ++ G L Sbjct: 192 AAAPGIWDTLRITIGWTWTYLVVAELVA------ANEGLGRRIMDAQRYLATETILFGTL 245 Query: 561 IMCCFVLALNRFL---WHPLYLYGTRCLR 586 + + L+ + + R Sbjct: 246 FIGFLGFLTDVVFKRTGRVLFAWHQQRTR 274 Score = 96.5 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 92/253 (36%), Gaps = 17/253 (6%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 +F L ++ + L P D++ L AS + R+ + + Sbjct: 32 VFPALLLLMWWLVTEFGLVKPLFLPGPGDVLAEGVRQAREGILWADASVSIYRICAGWLA 91 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 + + L R + L P + ++ +P++ + T+++ K Sbjct: 92 ATVLAVPVGILMGNFRLIEGALEPFVSTIRYMPVVALIPLTILWAGIGDGQK-------- 143 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 I +F + + ++ I +L ++ S + + +P + PG+ + + Sbjct: 144 ILILFLGTFFQQVLMVMDNVKTIDMNLIRAGQTLGFSNREILIRIILPAAAPGIWDTLRI 203 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 ++ W ++V +E++ + G+G I A + IL+ L + + FL D + Sbjct: 204 TIGWTWTYLVVAELVAANE------GLGRRIMDAQRYLATETILFGTLFIGFLGFLTDVV 257 Query: 259 L---FRPMIVWSN 268 R + W Sbjct: 258 FKRTGRVLFAWHQ 270 >gi|85059883|ref|YP_455585.1| glycine betaine transporter membrane protein [Sodalis glossinidius str. 'morsitans'] gi|84780403|dbj|BAE75180.1| glycine betaine/L-proline ABC transporter permease component [Sodalis glossinidius str. 'morsitans'] Length = 349 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + ++ L Q +T+ +V I + A T +L++++ + Sbjct: 94 LLGLPAPVAMVIFALLAWQMSTLSMGAATLVSLIIIGSIGAWSQAMVTLALVLTSLLFCV 153 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 154 IIGLPLGIWLARSVRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 210 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E + SF S Q + + +P ++P ++ + ++ Sbjct: 211 A-----LPPIVRLTILGIKQVPADLVEAAESFGTSPSQMLFKVQLPLALPTIMAGINQTL 265 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 266 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 316 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L V + +AWQ + T ++ + +G +T+ V+ ++ Sbjct: 92 HLLLGLPAPVAMVIFALLAWQMSTLSMGAATLVSLIIIGSIGAWSQAMVTLALVLTSLLF 151 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 II +P+GIW+ + I+P + PA V+ +V N+ ++ Sbjct: 152 CVIIGLPLGIWLARSVRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVT 207 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 I I+ I G P D E A SF + + + LP P + G Sbjct: 208 IIFALPPIVRLTILGIKQVPADLVEAAESFGTSPSQMLFKVQLPLALPTIMAGINQTLML 267 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 A + +++ + + G GLG + + +G + + + L+R Sbjct: 268 ALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 316 >gi|134299432|ref|YP_001112928.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] gi|134052132|gb|ABO50103.1| binding-protein-dependent transport systems inner membrane component [Desulfotomaculum reducens MI-1] Length = 254 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 104/255 (40%), Gaps = 19/255 (7%) Query: 20 FDLLAFVLVIGIINILLHGIQE--TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 F + +L++ +I I + P ++ L ++ + + R+ + + Sbjct: 7 FVIPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYRVFAGFL 66 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +++LF F A L ++RL + P+LD + IP + + +++F K+ LA Sbjct: 67 LTVLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSKLAVIILA 126 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 F +F + + + L EV F + KF + +P ++P ++ Sbjct: 127 TFFPVF--------LNTLNGILGCNKQLLEVGDVFGFTARDKFLRIVIPAALPSIIVGFR 178 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + + W ++ +E+I GIG I A + I+ +LT+ ++ D Sbjct: 179 LGLGYSWRSLIGAELIAASS------GIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDY 232 Query: 258 LLFRP---MIVWSNK 269 F+ +I W+ K Sbjct: 233 CFFKLTNHLIPWAGK 247 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 87/238 (36%), Gaps = 12/238 (5%) Query: 340 VSYMLDIFWFCVVCGVAI--GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIA 397 + +++ I W +I I + ++ I+++RV ++ Sbjct: 9 IPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYRVFAGFLLT 68 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 + P+ I +G ++ I P L P P+++ + ++I Sbjct: 69 VLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSK----LAVII 124 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 T + + N + G EV F T + I++P P + G G + Sbjct: 125 LATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDKFLRIVIPAALPSIIVGFRLGLGYS 184 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 W + I +E+ + ++G+G I ++ + +++G+L + F ++ + Sbjct: 185 WRSLIGAELIA------ASSGIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDYCFFK 236 >gi|241765577|ref|ZP_04763535.1| binding-protein-dependent transport systems inner membrane component [Acidovorax delafieldii 2AN] gi|241364605|gb|EER59654.1| binding-protein-dependent transport systems inner membrane component [Acidovorax delafieldii 2AN] Length = 278 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 82/263 (31%), Gaps = 20/263 (7%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL-------YVI 380 P + + + + W + + + D L + Sbjct: 19 PLHTAGQWLVRHSGRFGLVVLLLGIWQALCSAGWANPALLPSPAAVADTLWHLLREGDLQ 78 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 + RV+ IA+ + +GI +G + + Q+L P + PL + Sbjct: 79 RHVEASAARVLQGFAIAAAAALALGIAMGAYRRLDGFVDLLIQILKPVPPIAWIPLAILW 138 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 ++ G + IL + + F E+A + + R I+LP Sbjct: 139 FGI----DEGAKIFIIALGAFFPILVSSVDAVRQTDGRFVELARVLELPRGLFIRRIMLP 194 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P ++G AW + +E+ + + G+G I + VV G+ Sbjct: 195 GSLPQIMSGLRLGLAMAWMCVVAAELIA------ASRGVGFLIMDGRAMSQADLVVAGMA 248 Query: 561 IMCCFVLALNRFLW---HPLYLY 580 +M + L L + Sbjct: 249 LMGVLGKLTDDLLRHAEQRLVRW 271 Score = 111 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 93/259 (35%), Gaps = 19/259 (7%) Query: 18 NIFDLLAFVL-VIGIINILLHGIQET-TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSA 75 F L+ +L + + P + D + L L ++ + R+L Sbjct: 32 GRFGLVVLLLGIWQALCSAGWANPALLPSPAAVADTLWHLLREGDLQRHVEASAARVLQG 91 Query: 76 MVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAE 135 I+ RRL + ++ I++ +P + ++ +++F E Sbjct: 92 FAIAAAAALALGIAMGAYRRLDGFVDLLIQILKPVPPIAWIPLAILWFGID--------E 143 Query: 136 LAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWN 195 A IF I + + S ++ E++R L + +P S+P ++ Sbjct: 144 GAKIFIIALGAFFPILVSSVDAVRQTDGRFVELARVLELPRGLFIRRIMLPGSLPQIMSG 203 Query: 196 MMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 + + ++ W VVA+E+I G+G I ++ M M + L Sbjct: 204 LRLGLAMAWMCVVAAELIAAS------RGVGFLIMDGRAMSQADLVVAGMALMGVLGKLT 257 Query: 256 DQLL---FRPMIVWSNKFR 271 D LL + ++ W +F Sbjct: 258 DDLLRHAEQRLVRWRPQFE 276 >gi|329907288|ref|ZP_08274605.1| L-proline glycine betaine ABC transport system permease protein ProW [Oxalobacteraceae bacterium IMCC9480] gi|327547038|gb|EGF31925.1| L-proline glycine betaine ABC transport system permease protein ProW [Oxalobacteraceae bacterium IMCC9480] Length = 412 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 93/236 (39%), Gaps = 19/236 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 LA V + G++ G I + + + + A T +L+++ L+ Sbjct: 138 LAMVTIFGLLAWQFAGRGVAIGTV----ISLLVVVLLGIWPEAMVTLSLVLTSLAFCLVI 193 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 L A S R + P+LD MQ+ P +L V+ F G V G + +FA Sbjct: 194 GLPLGVLLASSDRAQRLTRPLLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIVFA- 249 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + + DL E +R++ S Q + + +P ++P ++ + ++ Sbjct: 250 ----LPPLVRLTNLGIRQVRPDLIEAARAYGASPAQMLFKVQLPLALPSIMAGVNQTLML 305 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + D++ Sbjct: 306 SLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRI 354 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 91/281 (32%), Gaps = 19/281 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 T +I + F + + + + + + S V+ + W Sbjct: 93 TPVESWINHGLDWFVTQFRPFFQTVRAPIDGTLMWVQDLLQSIPSLAMVTIFGLLAWQFA 152 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 GVAIG + ++ + +T+ V+ + +I +P+G+ + Sbjct: 153 GRGVAIGTVISLLVVVLLGIWPE--------AMVTLSLVLTSLAFCLVIGLPLGVLLASS 204 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 +P + PA V+ VV N+ ++ I ++ G Sbjct: 205 DRAQRLTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVIVTIVFALPPLVRLTNLG 260 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A ++ + + + LP P + G + + +++ + + G Sbjct: 261 IRQVRPDLIEAARAYGASPAQMLFKVQLPLALPSIMAGVNQTLMLSLSMVVIASMIAVG- 319 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G L + ++L+R Sbjct: 320 ------GLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRI 354 >gi|237723326|ref|ZP_04553807.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_2_4] gi|293373152|ref|ZP_06619514.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f] gi|298480784|ref|ZP_06998980.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. D22] gi|229447848|gb|EEO53639.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_2_4] gi|292631800|gb|EFF50416.1| ABC transporter, permease protein [Bacteroides ovatus SD CMC 3f] gi|298273218|gb|EFI14783.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. D22] Length = 274 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L I I+ + + I + + L + +T + S+ ++L Sbjct: 41 LFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R +L P+LD+MQ++P +L V++F G V G IF Sbjct: 101 IVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 85.0 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + V +AW G FT +L + +G T+ V + Sbjct: 39 HVLFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I+ +P+G+W P ++P L+ PA V+ V + + Sbjct: 99 ALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|170021256|ref|YP_001726210.1| taurine transporter subunit [Escherichia coli ATCC 8739] gi|194438856|ref|ZP_03070941.1| taurine uptake ABC transporter, permease protein [Escherichia coli 101-1] gi|253774648|ref|YP_003037479.1| taurine transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160436|ref|YP_003043544.1| taurine transporter subunit [Escherichia coli B str. REL606] gi|297516855|ref|ZP_06935241.1| taurine transporter subunit [Escherichia coli OP50] gi|300930341|ref|ZP_07145753.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|169756184|gb|ACA78883.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli ATCC 8739] gi|194422150|gb|EDX38152.1| taurine uptake ABC transporter, permease protein [Escherichia coli 101-1] gi|242376149|emb|CAQ30838.1| tauC, subunit of taurine ABC transporter [Escherichia coli BL21(DE3)] gi|253325692|gb|ACT30294.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972337|gb|ACT38008.1| taurine transporter subunit [Escherichia coli B str. REL606] gi|253976546|gb|ACT42216.1| taurine transporter subunit [Escherichia coli BL21(DE3)] gi|300461801|gb|EFK25294.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|309700630|emb|CBI99926.1| taurine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|323938554|gb|EGB34803.1| inner membrane transport system [Escherichia coli E1520] gi|323963355|gb|EGB58917.1| inner membrane transport system [Escherichia coli H489] Length = 275 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGENSK----ILLIYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 104/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L PI+++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ENSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + ++ + +RS S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSVQQVRIRAARSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|119383697|ref|YP_914753.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119383939|ref|YP_914995.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119373464|gb|ABL69057.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119373706|gb|ABL69299.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] Length = 296 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++ ++ L G + + + + + + +T +L+A ++S+ Sbjct: 62 PVILLVVAGLAWGASRSLRVVIGSVLTLVLIGLFGMWADTMKTISMVLAATLLSIAIGLP 121 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L A+S R+ V+ PILDIMQ++P +L V+ G+V G I+A Sbjct: 122 LGVLMARSARVQRVVSPILDIMQTMPSFVYLIPVVMLLG---IGRVPGLIAVVIYA---- 174 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + M + + ++ E + +F S WQK +P ++P ++ + ++ Sbjct: 175 -LPPMIRLTNLGIRQVDPEVLEATDAFGSSAWQKLVKAQLPLALPTIMAGINQTIMMALA 233 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + AI Q L+ ++G+ L+D++ Sbjct: 234 MVVIASMIGV-------QGLGQPVLRAISNQYFTLGLFNGFAIVGIAILFDRI 279 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 92/289 (31%), Gaps = 19/289 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVS--YMLDIFWF 349 T++L S + L ++ R+ E F + +L + Sbjct: 2 TSWLTSFPQLSDSLLRALQRSIDNGFRSFTRSYGDLIEGFFSPLQTLLIWFERLLLGTPW 61 Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIP 403 V+ V G+AW + + L +I L + T+ V+ +++ I +P Sbjct: 62 PVILLVVAGLAWGASRSLRVVIGSVLTLVLIGLFGMWADTMKTISMVLAATLLSIAIGLP 121 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +G+ + + + P ++ P+ V+ VV + + + + + Sbjct: 122 LGVLMARSARVQRVVSPILDIMQTMPSFVYLIPVVMLLGIGRVPGLIAVVIY----ALPP 177 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ++ G + E +F + W+ LP P + G A ++ Sbjct: 178 MIRLTNLGIRQVDPEVLEATDAFGSSAWQKLVKAQLPLALPTIMAGINQTIMMALAMVVI 237 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + + F + + + +R Sbjct: 238 ASMIG-------VQGLGQPVLRAISNQYFTLGLFNGFAIVGIAILFDRI 279 >gi|192362106|ref|YP_001982720.1| ABC transporter permease [Cellvibrio japonicus Ueda107] gi|190688271|gb|ACE85949.1| ABC transporter, permease protein [Cellvibrio japonicus Ueda107] Length = 266 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 18/260 (6%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 R H P + +L FW+ + + Y+ D + + Sbjct: 1 MNTRAHRPRQWQRLALQTSSLLACLAFWY-LASTYKFNFGVIAFTYVPTPGAVADAAWNL 59 Query: 381 WLG-------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + ++ RV A+++ I +G+ IG + S + P ++L PA + Sbjct: 60 VISSKLLPHLGSSLSRVFAGYFSAALLGIALGLLIGRSHRVESFLLPPLEVLRPIPAVAW 119 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + L+ + + G + IL N I G A A S + Sbjct: 120 IPLAILMFPSSELS----MIFITFTGALFPILLNTIHGVEAVDKRLIASAKSLGASASAI 175 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R +ILPG P +TG G +W + +E+ S G+G Y ES ++ Sbjct: 176 LREVILPGAAPSIITGLTIGMGTSWFCLVTAEMISGQW------GIGYYTWESYVIQNYA 229 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++V+G+L++ + + + Sbjct: 230 DIVVGMLLIGVLGMGSSLLV 249 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 89/227 (39%), Gaps = 17/227 (7%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P + D + L + + R+ + + L L +S R+ L+P Sbjct: 47 PTPGAVADAAWNLVISSKLLPHLGSSLSRVFAGYFSAALLGIALGLLIGRSHRVESFLLP 106 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L++++ IP + ++ ++ F +EL+ IF FT ++ + + + + Sbjct: 107 PLEVLRPIPAVAWIPLAILMF--------PSSELSMIFITFTGALFPILLNTIHGVEAVD 158 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 + L ++S S + +P + P ++ + + M WF +V +EMI Sbjct: 159 KRLIASAKSLGASASAILREVILPGAAPSIITGLTIGMGTSWFCLVTAEMISG------Q 212 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVW 266 GIG Y + Q+ I+ ML + + L + L I W Sbjct: 213 WGIGYYTWESYVIQNYADIVVGMLLIGVLGMGSSLLVKTLGNLFIPW 259 >gi|329939067|ref|ZP_08288441.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces griseoaurantiacus M045] gi|329301952|gb|EGG45845.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces griseoaurantiacus M045] Length = 604 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI+ +L ++ + +D +L + T +L A VI+L+ Sbjct: 49 LLMAGILAVLAWWLRGLAAGVLTFAGFAL-IDSLALWDRSMSTLSLVLVATVIALVIGVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S+ + V+ P+LD++Q++P + L +++F P G IFAI Sbjct: 108 VGIWAARSKTVSSVVRPVLDLLQTMPSMVLLIPAILFFGLGVPA---GVIATLIFAIAPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F S + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDAELVEAAEAFGTSPRNTLLRVQLPLALPTIMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + +I + D+ + L ++ + D++ Sbjct: 220 MVVIAGMVGTGGLGGA-------VNESIGQLDIGLGFESGLGIVILAIYLDRV 265 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 9/180 (5%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404 ++ G+ +AW G T+ + L T+ V+V +IA +I +PV Sbjct: 49 LLMAGILAVLAWWLRGLAAGVLTFAGFALIDSLALWDRSMSTLSLVLVATVIALVIGVPV 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW +SS ++P LL P+ V + + + I Sbjct: 109 GIWAARSKTVSSVVRPVLDLLQTMPSMVLLIPAILFFGLGVPAGVIATLIFAIA----PG 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F + + LP P + G + +++ Sbjct: 165 VRMTELGIRQVDAELVEAAEAFGTSPRNTLLRVQLPLALPTIMAGVNQVIMLGLSMVVIA 224 >gi|126730769|ref|ZP_01746579.1| ABC transporter permease protein [Sagittula stellata E-37] gi|126708935|gb|EBA07991.1| ABC transporter permease protein [Sagittula stellata E-37] Length = 670 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 83/573 (14%), Positives = 180/573 (31%), Gaps = 45/573 (7%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 L+ +LV G+ + L G + +V + + L T ++ +++ Sbjct: 127 PPLPWLSIILVAGLAGLKLGGWKLA----GLVSAAFLYALLFDLWAPTMLTLSSVIVSVI 182 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 + + + + L + P+ DIMQ++PI +L + F + Sbjct: 183 VGTIMGTLLGIAVFRQPWLEKIFTPVYDIMQTVPIFAYLVPILYLFG--------FGPVG 234 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 A+ A M + +L +P + E S + WQ W + +P L+ + Sbjct: 235 AMIATVIYATPPMARVVTLALQEVPPSIREASAMAGTTPWQSMWLVLLPSCRAKLLVGIN 294 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + V+ + +I G+G+ + A++ + + A ++ + D+ Sbjct: 295 QLIMLSLVVVIIASVI-------GADGLGAVVLQALQSLRIGNGVEAGAAIVLLAIALDR 347 Query: 258 L------------LFRPMIVWSNKFRLERTTGIYPADSWVLYLFRKTNFLRFIGYSSWNF 305 L + R + F + + + L +F + S + Sbjct: 348 LGRAAATQVPNRQVARYL--RGPTFGMALLVALAGPALLQVALPWVVSFPDWASLSMASH 405 Query: 306 FSPLSNNVKKLCR-TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI 364 + L + + L + L+ +S V I W+ Sbjct: 406 WDDLVLAINESWSEELRAFKTATFIWLLKPAKLLALSVPWSGAVIAVGALAYILQGWRLA 465 Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 V + + +T + + ++ + +I IP+GI P + + + Sbjct: 466 LPCVLMMLFVATSGLWVQAQLTTYLLAASVLPSLLIGIPLGILCVAYPKVDAVMSWVIDT 525 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 + P V+ V+ + + + Y A P EVA Sbjct: 526 VQTLPTFVYIIPVIMFLGSGDFAALIAIVAYSWTPAARY----TAAALRNIPAAVTEVAD 581 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + W+ ++ LP + A+ +++ + T GL A Sbjct: 582 MSGASAWQRLVWVRLPVARSGLILAVNQTIMMAFGVLVITALIG-------TKGLEAEAL 634 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPL 577 S K ++ M C + +R L L Sbjct: 635 VSLSKADPGRGIVAGAAMVCLAIIADRLLRASL 667 >gi|29828678|ref|NP_823312.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29605782|dbj|BAC69847.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 303 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 99/261 (37%), Gaps = 12/261 (4%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV--HSLPQYASRTTL 70 ++I P + + ++V + + +P I L Y + Sbjct: 47 QKILPPVIAIALVLVVWQALISFKIVTDPSKLPPLSAVWNEIENAWLEGKLLGYIWTSVS 106 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L + +L+ L A+ R + + PIL +QS+P + ++ VV+F Sbjct: 107 RGLLGFLFALVIGTPLGLLVARVRFVRAAIGPILQGLQSLPSVAWVPPAVVWFGLNNSMM 166 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 I V ++ + + +P R+ +G + W++ +P ++P Sbjct: 167 YT--------VILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLRGTWHVVLPAALP 218 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 G V + + W ++A+E+I G+G + D+ + A+L +L Sbjct: 219 GYVAGLKQGWAFSWRSLMAAEIIA--SFPDLGVGLGQLLENGRNAIDMAMVFEAILLILV 276 Query: 251 VIFLYDQLLFRPMIVWSNKFR 271 V D L+F P+ W + R Sbjct: 277 VGIAIDLLIFSPLERWVLRSR 297 Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 6/207 (2%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ R ++ + A +I P+G+ + + + I P Q L + P+ + P Sbjct: 95 GKLLGYIWTSVSRGLLGFLFALVIGTPLGLLVARVRFVRAAIGPILQGLQSLPSVAWVPP 154 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V N + +++ G I +++G P F + TG R + Sbjct: 155 AVVWFGL----NNSMMYTVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLRGTWH 210 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 ++LP P YV G +W + + +E+ + GLG + V Sbjct: 211 VVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNAIDMAMVF 268 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583 +L++ +A++ ++ PL + R Sbjct: 269 EAILLILVVGIAIDLLIFSPLERWVLR 295 >gi|288932110|ref|YP_003436170.1| binding-protein-dependent transporters inner membrane component [Ferroglobus placidus DSM 10642] gi|288894358|gb|ADC65895.1| binding-protein-dependent transport systems inner membrane component [Ferroglobus placidus DSM 10642] Length = 253 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 86/233 (36%), Gaps = 7/233 (3%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 L + + A + + +V ++ ++ RV+ +A + IP Sbjct: 14 LWYLLYFLNVLPAFHVVVVTFLELVVEAEPVLGKTLLQHAASSLLRVLAGATVAFSLSIP 73 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +GI + + + + P ++L P + PL + + ++ G + Sbjct: 74 LGILM-WFSRTYNLLHPAIEVLRPIPPLAWIPLSYILFASFPNPTVFAQIFIVAVGAFFP 132 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + P +F E+A F + I+LP P +TG G W + I Sbjct: 133 SFVTISDYVRGIPQEFIELAKVFGARNFDLLTKIVLPYSLPGIITGIRVGLGVGWMSIIA 192 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEK-GSFPEVVLGVLIMCCFVLALNRFLWH 575 +E+ + +GLG +I E G PE++ G+ ++ +N L+ Sbjct: 193 AEMIASSG-----SGLGYFILVMYEVGGRMPEILAGMAMIGLIGYLMNTLLFK 240 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 105/217 (48%), Gaps = 11/217 (5%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+A+ + LR+L+ ++ + L SR +L P +++++ IP L ++ Sbjct: 47 KTLLQHAASSLLRVLAGATVAFSLSIPLGILMWFSRTYN-LLHPAIEVLRPIPPLAWIPL 105 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 + + F +P + A IF + + ++ + IP++ E+++ F + Sbjct: 106 SYILF-ASFPNPTVF---AQIFIVAVGAFFPSFVTISDYVRGIPQEFIELAKVFGARNFD 161 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + +P+S+PG++ + + + GW ++A+EMI + G+G +I + + Sbjct: 162 LLTKIVLPYSLPGIITGIRVGLGVGWMSIIAAEMIASSGS-----GLGYFILVMYEVGGR 216 Query: 239 LAILYAMLTMLGVI-FLYDQLLFRPMIVWSNKFRLER 274 + + A + M+G+I +L + LLF+ + + + E Sbjct: 217 MPEILAGMAMIGLIGYLMNTLLFKLEERFPWRLKSET 253 >gi|163790850|ref|ZP_02185275.1| glycine betaine ABC transporter permease [Carnobacterium sp. AT7] gi|159873918|gb|EDP67997.1| glycine betaine ABC transporter permease [Carnobacterium sp. AT7] Length = 283 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 17/236 (7%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L F+L++ +I + + IV + I L T +L A ++S++ Sbjct: 58 LLFILIVAVIAFIASRKKFGLAAFSIVGLWFIY--NQGLWSDLMNTLTLVLVASLLSVII 115 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + L AK++ ++ P+LD MQ++P +L V +F G V G + IFAI Sbjct: 116 GVPFGILMAKNKVANTIIAPVLDFMQTMPAFVYLIPAVAFFG---IGMVPGVFASLIFAI 172 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + + +L E + SF +G QK + + +P + ++ + ++ Sbjct: 173 PPTVRF-----TNLGIRQVSDELVEAAESFGSTGAQKLFKVELPLAKSTIMAGINQTVML 227 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI PG+G + +++ + + L ++ + + D+L Sbjct: 228 ALSMVVIASMI-------GAPGLGREVLSSLQRAQVGTGFVSGLGLVVLAIIIDRL 276 Score = 73.4 bits (179), Expect = 1e-10, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 79/233 (33%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 V +L I V+ +A + + + + + T+ V+V +++ I Sbjct: 55 VPPLLFILIVAVIAFIASRKKFGLAAFSIVGLWFIYNQGLWSDLMNTLTLVLVASLLSVI 114 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P GI + ++ I P + PA V+ V+ + + I Sbjct: 115 IGVPFGILMAKNKVANTIIAPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVFASLIFAIPP 174 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 T + G ++ E A SF TG + + LP + G A + Sbjct: 175 TVRF----TNLGIRQVSDELVEAAESFGSTGAQKLFKVELPLAKSTIMAGINQTVMLALS 230 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + S ++ + L + + ++R Sbjct: 231 MVVIASMIG-------APGLGREVLSSLQRAQVGTGFVSGLGLVVLAIIIDRL 276 >gi|60682640|ref|YP_212784.1| putative glycine betaine transport system permease protein [Bacteroides fragilis NCTC 9343] gi|60494074|emb|CAH08866.1| putative glycine betaine transport system permease protein [Bacteroides fragilis NCTC 9343] Length = 274 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L + I ++L + + ++ + L + +T +LS+ ++L Sbjct: 41 LFGIPFYLTIAAMVLLAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R V+ PILD+MQ++P +L V++F + +F Sbjct: 101 IVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGV--------VPGVF 152 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 153 ATIIFAMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 84.2 bits (207), Expect = 6e-14, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + + +AW G V FT +L + +G T+ V+ + Sbjct: 39 HILFGIPFYLTIAAMVLLAWAKAGRGVAVFTLLGLLLIYGMGFWEATMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I+ +P+G+W I P L+ PA V+ V + + Sbjct: 99 ALIVGVPIGVWTANSNRAEKVIHPILDLMQTMPAFVYLIPAVLFFGLGVVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVIRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|255015584|ref|ZP_05287710.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_1_7] Length = 274 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 100/238 (42%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 LL I I + + ++ I ++ ++L + +T +LS+ ++L Sbjct: 41 LLGIPFYITIAILTFLALYKSGRGTGIFTLLGLSLVYGMGFWEETMQTLALVLSSTGMAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S +L P+LD MQ++P +L V++F G V GA IF Sbjct: 101 MLGIPLGIWMAGSGHCNKILQPVLDCMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + L +P+++EE +RSF + Q + + +P ++P ++ + ++ Sbjct: 158 A-----LPPVARLTALGLRQVPKNVEEAARSFGATPVQLLFKVELPLALPTILAGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVVAAMISAG-------GLGEVVLKGITQMKIGMGFEGGIAVVILAIVLDRI 263 Score = 77.7 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 80/235 (34%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L F + + +A G FT + V +G T+ V+ +A Sbjct: 40 VLLGIPFYITIAILTFLALYKSGRGTGIFTLLGLSLVYGMGFWEETMQTLALVLSSTGMA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 ++ IP+GIW+ H + +QP + PA V+ V + + Sbjct: 100 LMLGIPLGIWMAGSGHCNKILQPVLDCMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 + G P + +E A SF T + + LP P + G + Sbjct: 158 --ALPPVARLTALGLRQVPKNVEEAARSFGATPVQLLFKVELPLALPTILAGVNQTIMMS 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +V+ + S G GLG + + + G + + + L+R Sbjct: 216 LSMVVVAAMISAG-------GLGEVVLKGITQMKIGMGFEGGIAVVILAIVLDRI 263 >gi|239625201|ref|ZP_04668232.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519431|gb|EEQ59297.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 263 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 77/200 (38%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D +I ++ + + ++I IP+GI + + I+P LL P + Sbjct: 60 PDGATLITHTLQSLKVALTGYAMGAVIGIPMGILMAWNRFADMFIRPLFDLLRPIPGLAW 119 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + L +L++ + + N G + V F + + Sbjct: 120 IPLFILLFGIGLL----PKALVIFIASLIACVVNAYTGIRQTKDLHLWVGDVFGASDMQK 175 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 I +P P TG A G AW A + +E+ + + GLG I ++ Sbjct: 176 LFKIAIPTATPMIFTGLRVALGSAWTALVAAELLA------SSNGLGYMIQQARSISRPD 229 Query: 554 EVVLGVLIMCCFVLALNRFL 573 V++G++ + LA++R L Sbjct: 230 LVLVGMITIGIVGLAMDRLL 249 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 14/203 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L + ++ L+ + + L A +R M + P+ D+++ IP L ++ Sbjct: 61 DGATLITHTLQSLKVALTGYAMGAVIGIPMGILMAWNRFADMFIRPLFDLLRPIPGLAWI 120 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F K + IF + + + Y + V F S Sbjct: 121 PLFILLFGIGLLPKAL--------VIFIASLIACVVNAYTGIRQTKDLHLWVGDVFGASD 172 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 QK + + +P + P + + +++ W +VA+E++ + G+G I A Sbjct: 173 MQKLFKIAIPTATPMIFTGLRVALGSAWTALVAAELLASSN------GLGYMIQQARSIS 226 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 +L M+T+ V D+LL Sbjct: 227 RPDLVLVGMITIGIVGLAMDRLL 249 >gi|220920372|ref|YP_002495673.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gi|219944978|gb|ACL55370.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 257 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 98/244 (40%), Gaps = 17/244 (6%) Query: 337 NQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-------GCITMFR 389 + V + F + VA + + ++ + T +++ +T++R Sbjct: 11 PRAVLGVGFFVLFVLAWAVATLGGFVPVTFLADPLTMLQDGWLLLTRFGFLSDIGVTVWR 70 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 VV ++A+++ +P+GI +G + + +PF PA+ F PL++ + Sbjct: 71 VVGGFLLAAVVAVPLGILMGAYKPVEAFFEPFVSFARYLPASAFVPLLILWAGIGEMQK- 129 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 L++ G+ + I+ V D E A + + R +++P P Sbjct: 130 ---LLVIFIGSVFQIVLMVAVSVGQVRRDLVEAAYTLGASDTGIIRRVLIPATAPDIAEI 186 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 G AW IV+E+ ++G+G I ES + +++ G++++ LA Sbjct: 187 LRLVLGWAWTYVIVAELIG------SSSGIGHMIIESQALLATGQIIFGIIVIGLIGLAS 240 Query: 570 NRFL 573 + Sbjct: 241 DFLF 244 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 83/239 (34%), Gaps = 15/239 (6%) Query: 22 LLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + FVL + + + P ++ + L T R++ +++ Sbjct: 20 FVLFVLAWAVATLGGFVPVTFLADPLTMLQDGWLLLTRFGFLSDIGVTVWRVVGGFLLAA 79 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + L + + P + + +P F+ +++ E+ + Sbjct: 80 VVAVPLGILMGAYKPVEAFFEPFVSFARYLPASAFVPLLILWAGIG--------EMQKLL 131 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF V+ + + S+ + RDL E + + S + +P + P + + + + Sbjct: 132 VIFIGSVFQIVLMVAVSVGQVRRDLVEAAYTLGASDTGIIRRVLIPATAPDIAEILRLVL 191 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W +V+ +E+I GIG I + I++ ++ + + D L Sbjct: 192 GWAWTYVIVAELIGSSS------GIGHMIIESQALLATGQIIFGIIVIGLIGLASDFLF 244 >gi|295085035|emb|CBK66558.1| ABC-type proline/glycine betaine transport system, permease component [Bacteroides xylanisolvens XB1A] Length = 274 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L I I+ + + I + + L + +T + S+ ++L Sbjct: 41 LFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R +L P+LD+MQ++P +L V++F G V G IF Sbjct: 101 IVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 85.0 bits (209), Expect = 4e-14, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + V +AW G FT +L + +G T+ V + Sbjct: 39 HVLFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I+ +P+G+W P ++P L+ PA V+ V + + Sbjct: 99 ALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|225420037|ref|ZP_03762340.1| hypothetical protein CLOSTASPAR_06380 [Clostridium asparagiforme DSM 15981] gi|225041293|gb|EEG51539.1| hypothetical protein CLOSTASPAR_06380 [Clostridium asparagiforme DSM 15981] Length = 262 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D + ++ ++ I +++ +P+GI + + ++P L+ P + Sbjct: 59 PDGATLGQHLLESLKVCLMGYSIGALLGVPLGIAMAWNKWCDWLVRPVFDLIRPVPGLAW 118 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+ + ++++ + + N G V F + W+ Sbjct: 119 TPMFILIFGIG----IEAKAMVIFVNSFVACIVNTYTGIRQTDQLHLWVGDVFGASQWQK 174 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 I +P P TG TA GG+W A + +E+ + + GLG I ++ Sbjct: 175 LVKIAIPTATPMIFTGLRTALGGSWMALVAAEMLA------ASKGLGFMIQQARYISRPD 228 Query: 554 EVVLGVLIMCCFVLALNRFL 573 V++G+L++ LAL+ L Sbjct: 229 LVIVGMLMIGVVGLALDAIL 248 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 74/203 (36%), Gaps = 14/203 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L Q+ + L I L A ++ ++ P+ D+++ +P L + Sbjct: 60 DGATLGQHLLESLKVCLMGYSIGALLGVPLGIAMAWNKWCDWLVRPVFDLIRPVPGLAWT 119 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F K + IF + + Y + + V F S Sbjct: 120 PMFILIFGIGIEAKAM--------VIFVNSFVACIVNTYTGIRQTDQLHLWVGDVFGASQ 171 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 WQK + +P + P + + ++ G W +VA+EM+ G+G I A Sbjct: 172 WQKLVKIAIPTATPMIFTGLRTALGGSWMALVAAEMLAASK------GLGFMIQQARYIS 225 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 ++ ML + V D +L Sbjct: 226 RPDLVIVGMLMIGVVGLALDAIL 248 >gi|16077950|ref|NP_388765.1| aliphatic sulfonate ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|732410|sp|P40401|SSUC_BACSU RecName: Full=Putative aliphatic sulfonates transport permease protein ssuC gi|438473|gb|AAA64349.1| protein is hydrophobic, with homology to E. coli ProW; putative [Bacillus subtilis] gi|1903040|emb|CAB07522.1| hypothetical 30.2 kd protein [Bacillus subtilis subsp. subtilis str. 168] gi|2633208|emb|CAB12713.1| aliphatic sulfonate ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] Length = 276 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 97/277 (35%), Gaps = 16/277 (5%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + L +T P + + I + V+ G+ + A + Sbjct: 4 AEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTI 63 Query: 370 HFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 T++++ + I+++R + ++ + + + +GI GF + P Q+L Sbjct: 64 VLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLR 123 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P PL + + + LL+ G + + N G EVA Sbjct: 124 TVPHLAVTPLFILWFGF----DEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVL 179 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + +ILP P + G + G AW +V+E+ ++G+G I ++ Sbjct: 180 EFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMG------SSSGVGYMIMDA 233 Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + +V G++I + R L L + Sbjct: 234 RQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKW 270 Score = 116 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 18/253 (7%) Query: 23 LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + + +I L + P IV + L + + R ++ Sbjct: 37 AVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAG 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + LA S+R + L P L +++++P L +++F K++ L A F Sbjct: 97 LGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFP 156 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 ++ + + + + L EV+R Q+ + +P ++P ++ + +S+ Sbjct: 157 VY--------INTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W +V +E++ G+G I A + + ++ V L D +L Sbjct: 209 IAWLGLVVAELMGSSS------GVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRL 262 Query: 259 LFRPMIVWSNKFR 271 L R ++ W N + Sbjct: 263 LERKLLKWRNSYE 275 >gi|294677765|ref|YP_003578380.1| taurine ABC transporter permease TauC [Rhodobacter capsulatus SB 1003] gi|294476585|gb|ADE85973.1| taurine ABC transporter, permease protein TauC [Rhodobacter capsulatus SB 1003] Length = 417 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FRV+ ++I IP+G +G + P + + P PL++ Sbjct: 222 GFSLFRVLAGFFFGALIGIPLGYAMGLSGWVRGWFDPIVEFMRPVPPLALIPLIIIWWGI 281 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L+ W ++ +G + A S + W+ ++I+P Sbjct: 282 WETGK----IVLLFLAALWIMVIAARSGVAGVRLSKVHAAYSLGASKWQVLTHVIIPNSL 337 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P GA A G W + +E+ + G G I +++ VV+G+L++ Sbjct: 338 PDLFIGARVAMGVCWGTVVAAELVAAEK------GAGMMILVASKFQLTDIVVMGILLIG 391 Query: 564 CFVLALNRFL 573 ++ L Sbjct: 392 LIGYGIDVAL 401 Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 17/212 (8%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L ++ + R+L+ L S + PI++ M+ +P L + + Sbjct: 217 LWEHLGFSLFRVLAGFFFGALIGIPLGYAMGLSGWVRGWFDPIVEFMRPVPPLALIPLII 276 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +++ GK I +F + +W M + + + + S S WQ Sbjct: 277 IWWGIWETGK--------IVLLFLAALWIMVIAARSGVAGVRLSKVHAAYSLGASKWQVL 328 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 ++ +P S+P L ++M W VVA+E++ G G I +A K Q Sbjct: 329 THVIIPNSLPDLFIGARVAMGVCWGTVVAAELVA------AEKGAGMMILVASKFQLTDI 382 Query: 241 ILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 ++ +L + + + D L R + W + Sbjct: 383 VVMGILLIGLIGYGIDVALRAAERHFVPWRGR 414 >gi|237713750|ref|ZP_04544231.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409343|ref|ZP_06085886.1| choline ABC transporter, permease [Bacteroides sp. 2_1_22] gi|294805993|ref|ZP_06764860.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC 1b] gi|229446197|gb|EEO51988.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352795|gb|EEZ01892.1| choline ABC transporter, permease [Bacteroides sp. 2_1_22] gi|294446875|gb|EFG15475.1| ABC transporter, permease protein [Bacteroides xylanisolvens SD CC 1b] Length = 274 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L I I+ + + I + + L + +T + S+ ++L Sbjct: 41 LFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R +L P+LD+MQ++P +L V++F G V G IF Sbjct: 101 IVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 84.6 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + V +AW G FT +L + +G T+ V + Sbjct: 39 HVLFGIPFYITILVLAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVFSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I+ +P+G+W P ++P L+ PA V+ V + + Sbjct: 99 ALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|54024412|ref|YP_118654.1| putative ABC transporter permease [Nocardia farcinica IFM 10152] gi|54015920|dbj|BAD57290.1| putative ABC transporter permease [Nocardia farcinica IFM 10152] Length = 281 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 100/291 (34%), Gaps = 14/291 (4%) Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 S+ + ++ V + R + +++ S + + V Sbjct: 1 MSTVALTAAPADTVAEPVRDTPAGASRWRSRLIRVVSVAAAIALWQLLTVNDVRAGLRFD 60 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKI 418 A ++ IV F +L ++ R+ +A+++ + GI +G + Sbjct: 61 ALPTVTEIVAEFGEHLGRQEYYLDIGQSLIRIGTGFGLAAVVGVLAGIGLGRSGLLGDVF 120 Query: 419 QPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPND 478 P +L+ PA P+ + + + + + + +L + A P Sbjct: 121 GPLTELVRPIPAIALVPVAILLFP----SDESGIVFITFTASLFPVLVSTRHAVRALPTI 176 Query: 479 FKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTG 538 +++ + T ++ PGI P +G G AW I +E+ S G Sbjct: 177 WEDAVRTLGATRTDVLVRVVFPGILPGVFSGLSVGMGVAWICLISAEMISGRL------G 230 Query: 539 LGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL---WHPLYLYGTRCLR 586 LG +S +P V +G++ + A + + L + R +R Sbjct: 231 LGYRTWQSYTIVDYPAVFVGMITIGVLGFATSGLVELAGRRLTRWLPREVR 281 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 83/207 (40%), Gaps = 17/207 (8%) Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 ++ +R+ + ++ + + +S LG V P+ ++++ IP + + ++ F Sbjct: 86 GQSLIRIGTGFGLAAVVGVLAGIGLGRSGLLGDVFGPLTELVRPIPAIALVPVAILLF-- 143 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 E +F FT+ ++ + S ++ +P E+ R+ + + Sbjct: 144 ------PSDESGIVFITFTASLFPVLVSTRHAVRALPTIWEDAVRTLGATRTDVLVRVVF 197 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P +PG+ + + M W ++++EMI G+G + D A+ M Sbjct: 198 PGILPGVFSGLSVGMGVAWICLISAEMISG------RLGLGYRTWQSYTIVDYPAVFVGM 251 Query: 246 LTMLGVIFLYDQLL---FRPMIVWSNK 269 +T+ + F L+ R + W + Sbjct: 252 ITIGVLGFATSGLVELAGRRLTRWLPR 278 >gi|255327602|ref|ZP_05368668.1| putative aliphatic sulfonates transport permease protein SsuC [Rothia mucilaginosa ATCC 25296] gi|255295276|gb|EET74627.1| putative aliphatic sulfonates transport permease protein SsuC [Rothia mucilaginosa ATCC 25296] Length = 280 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 77/209 (36%), Gaps = 10/209 (4%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + + I+ RV++ I +++ + +G IG + P Sbjct: 68 RVVSAGVELAQRGELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIAAPTIGA 127 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L A P+ + PL++ + + L+ G + + V A + E A Sbjct: 128 LRAVPSLAWVPLLLLWIGIGENSK----VTLVAIGAFFPVYTTVSAALAHVDPKLVEAAR 183 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F + G R + + LP + P V+G A AW + +E+ + GLG + Sbjct: 184 AFGLKGLRLFTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELLG------ASMGLGYLLT 237 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +S G ++L ++ + + + Sbjct: 238 DSQNNGRTDRLLLAIVALAVLGKITDALV 266 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 95/219 (43%), Gaps = 14/219 (6%) Query: 41 ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100 + P +V L ++ + +T R+L I + V L S + ++ Sbjct: 62 QLPSPDRVVSAGVELAQRGELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIA 121 Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P + ++++P L ++ +++ KV + A F ++T+ + +L + Sbjct: 122 APTIGALRAVPSLAWVPLLLLWIGIGENSKVTLVAIGAFFPVYTT--------VSAALAH 173 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 + L E +R+F L G + F + +P +P +V + ++++ W F+VA+E++ Sbjct: 174 VDPKLVEAARAFGLKGLRLFTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELLGAS---- 229 Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G + + +L A++ + + + D L+ Sbjct: 230 --MGLGYLLTDSQNNGRTDRLLLAIVALAVLGKITDALV 266 >gi|49083280|gb|AAT50991.1| PA5095 [synthetic construct] Length = 284 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L++ I+ + +P ++ + + L +T ML A IS+L Sbjct: 54 LLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVATFISVLIGIPL 113 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+S RL VL+P+LDIMQ++P +L ++ F ++ AIFA Sbjct: 114 GILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + ++ E +F + WQ+ + + +P ++P ++ + + Sbjct: 166 APPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + + I+ ++ L A L ++ + + D++ Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRI 270 Score = 76.9 bits (188), Expect = 1e-11, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 86/245 (35%), Gaps = 17/245 (6%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387 L + + +L + ++ + IAW + ++ +L+++ + T+ Sbjct: 37 LWAIVNLEGLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTL 96 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 ++V I+ +I IP+GI + + + P ++ P+ V+ V+ Sbjct: 97 ALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + + ++ G ++ E ++F W+ + LP P + Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIM 212 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G A + +++ + GLG + + + + + L + + Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGKGLEAGLAIVILAV 265 Query: 568 ALNRF 572 ++R Sbjct: 266 VIDRI 270 >gi|206560925|ref|YP_002231690.1| putative transmembrane protein of ABC transporter [Burkholderia cenocepacia J2315] gi|198036967|emb|CAR52882.1| putative transmembrane component of ABC transporter [Burkholderia cenocepacia J2315] Length = 275 Score = 121 bits (304), Expect = 4e-25, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 91/250 (36%), Gaps = 10/250 (4%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI 380 H +L + + + ++G + +V+ + +++ Sbjct: 21 ARSPAHAAAGWLGVAGLVATVVVWWAAIHALTEPGSLGRQFAPDSALVSLRSLCADDHLL 80 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 +++ R+ V + A + +P+G+ +G + + P Q L + PL V Sbjct: 81 EHALVSLRRIGVGLGAALLAGVPLGLLLGRVQWVERMLSPTFQFLRMVSPLSWMPLAVMS 140 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + L+ F W +L + AG + ++ +S T +I+LP Sbjct: 141 FGIGDR----AIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLAATRRELLVHIVLP 196 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 I + G A G W + +E+ GLG I ++ ++ ++ E+ ++ Sbjct: 197 AIAGPLLNGTRLAIGILWIVLVPAEMLG------VNAGLGYLILDTRDRLAYAELTAVIV 250 Query: 561 IMCCFVLALN 570 ++ L+ Sbjct: 251 VIGALGFVLD 260 Score = 97.7 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 17/209 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L ++A + R+ + +LL L + + + +L P ++ + L ++ Sbjct: 78 HLLEHALVSLRRIGVGLGAALLAGVPLGLLLGRVQWVERMLSPTFQFLRMVSPLSWMPLA 137 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V+ F + A F + + +W + S + I R ++ S + + Sbjct: 138 VMSFGIG--------DRAIYFLLGFAALWPVLMSTAAGVKQIDRRWLQLGASLAATRREL 189 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 ++ +P L+ +++ W +V +EM+ V G+G I Sbjct: 190 LVHIVLPAIAGPLLNGTRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYA 243 Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIV 265 + ++ + + F+ D +LL R ++ Sbjct: 244 ELTAVIVVIGALGFVLDGITRLLARALLA 272 >gi|107104191|ref|ZP_01368109.1| hypothetical protein PaerPA_01005264 [Pseudomonas aeruginosa PACS2] gi|116053242|ref|YP_793565.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218894194|ref|YP_002443063.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238198|ref|ZP_04931521.1| hypothetical protein PACG_04324 [Pseudomonas aeruginosa C3719] gi|254244024|ref|ZP_04937346.1| hypothetical protein PA2G_04857 [Pseudomonas aeruginosa 2192] gi|296391943|ref|ZP_06881418.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110133|ref|ZP_07796035.1| putative amino acid transporter permease protein [Pseudomonas aeruginosa 39016] gi|115588463|gb|ABJ14478.1| putative amino acid transporter permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170129|gb|EAZ55640.1| hypothetical protein PACG_04324 [Pseudomonas aeruginosa C3719] gi|126197402|gb|EAZ61465.1| hypothetical protein PA2G_04857 [Pseudomonas aeruginosa 2192] gi|218774422|emb|CAW30239.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310882537|gb|EFQ41131.1| putative amino acid transporter permease protein [Pseudomonas aeruginosa 39016] Length = 283 Score = 121 bits (304), Expect = 4e-25, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L++ I+ + +P ++ + + L +T ML A IS+L Sbjct: 54 LLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVATFISVLIGIPL 113 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+S RL VL+P+LDIMQ++P +L ++ F ++ AIFA Sbjct: 114 GILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + ++ E +F + WQ+ + + +P ++P ++ + + Sbjct: 166 APPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + + I+ ++ L A L ++ + + D++ Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRI 270 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 86/245 (35%), Gaps = 17/245 (6%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387 L + + +L + ++ + IAW + ++ +L+++ + T+ Sbjct: 37 LWAIVNLEGLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTL 96 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 ++V I+ +I IP+GI + + + P ++ P+ V+ V+ Sbjct: 97 ALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + + ++ G ++ E ++F W+ + LP P + Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIM 212 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G A + +++ + GLG + + + + + L + + Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGKGLEAGLAIVILAV 265 Query: 568 ALNRF 572 ++R Sbjct: 266 VIDRI 270 >gi|197118119|ref|YP_002138546.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197087479|gb|ACH38750.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 252 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 10/193 (5%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 ++ D + I++ R ++A + IP+G+++G I P Q+ Sbjct: 39 DVVLAIKELSDNGVLWTNIGISLARFAAAYLMAVVAGIPLGLFLGRFTRCHRAIDPLIQV 98 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L +FPL V N ++ + +L I+ P + +V++ Sbjct: 99 LRPISPIAWFPLAVLWFGIG----NAPAVFIIFLAAFYPVLLTTISAVRGVPAVYLKVST 154 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F + + +I+P FP + G A G W + E+ +GLG I Sbjct: 155 NFGAGAFLTFVRVIVPAAFPGIMVGLHIAVGTGWIHLVAGEMLG------AQSGLGFMIV 208 Query: 545 ESTEKGSFPEVVL 557 ++ +V+ Sbjct: 209 DARNFLRTDQVMA 221 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 91/226 (40%), Gaps = 15/226 (6%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 + ++AFVL+ I + ++ P D+V + D L + R +A + Sbjct: 11 PLLTVVAFVLIWQ-IAARRYPPEQFPAPSDVVLAIKELSDNGVLWTNIGISLARFAAAYL 69 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++++ + R + P++ +++ I + + V++F Sbjct: 70 MAVVAGIPLGLFLGRFTRCHRAIDPLIQVLRPISPIAWFPLAVLWFGIG--------NAP 121 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 A+F IF + + + + ++ +P +VS +F + F + VP + PG++ + Sbjct: 122 AVFIIFLAAFYPVLLTTISAVRGVPAVYLKVSTNFGAGAFLTFVRVIVPAAFPGIMVGLH 181 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 +++ GW +VA EM+ G+G I A ++ Sbjct: 182 IAVGTGWIHLVAGEMLG------AQSGLGFMIVDARNFLRTDQVMA 221 >gi|254252109|ref|ZP_04945427.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] gi|124894718|gb|EAY68598.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] Length = 291 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 88/234 (37%), Gaps = 10/234 (4%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIW 401 + + W + V +T + ++ RV+ A++ Sbjct: 52 WQAAVHWRLSLGVVTFANVPAPADVGPALWTLLHSPKLPMHLFASVTRVLAGFAAAALAG 111 Query: 402 IPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQ 461 + +G+ IG + + P ++L PA + PL + L+ + + G Sbjct: 112 VGLGLAIGRYRALEDALLPPLEVLRPIPAVAWIPLAILMFPSSELS----MMFITFVGAL 167 Query: 462 WYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNAS 521 + IL N + GA A A S G+ + +ILPG P TG G AW Sbjct: 168 FPILLNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCL 227 Query: 522 IVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + +E+ + + G+G + S ++P++V+G+ ++ + + + Sbjct: 228 VTAEMIAGQY------GIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 Score = 103 bits (258), Expect = 8e-20, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 14/230 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 +++ + P D+ + L LP + + R+L+ + L Sbjct: 60 LSLGVVTFANVPAPADVGPALWTLLHSPKLPMHLFASVTRVLAGFAAAALAGVGLGLAIG 119 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 + R L L+P L++++ IP + ++ ++ F +EL+ +F F ++ + Sbjct: 120 RYRALEDALLPPLEVLRPIPAVAWIPLAILMF--------PSSELSMMFITFVGALFPIL 171 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + L +RS G+ + + +P + P + + + M WF +V +E Sbjct: 172 LNTVHGAEAVDPRLVATARSLGTRGFALYAEVILPGAAPAIFTGLSIGMGTAWFCLVTAE 231 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 MI GIG + + Q+ I+ M + + L+ R Sbjct: 232 MIAG------QYGIGYFTWASYTLQNYPDIVVGMALIGLLGMGSSLLVKR 275 >gi|186471608|ref|YP_001862926.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gi|184197917|gb|ACC75880.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 294 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 16/239 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 L A V ++ ++ + V I V + + + L T +++A V S Sbjct: 42 GLAAVPFVAMLVFLVAFALWRRGVVFSIFVGLALLAIHYMGLWAQTVSTLALVIAATVFS 101 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L+ A+++R+ MVL +LD MQ++P +L V+ F + A+ Sbjct: 102 LVIGVPLGIWGARNKRVEMVLRSLLDFMQTMPAFVYLIPAVILFGLG--------RVPAV 153 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 A + + + + +L E RSF + Q W + +P ++P ++ + + Sbjct: 154 IATIVFAMPPVVRLTTLGIRQVREELLEAGRSFGSTDAQLLWKVQLPNALPSIMAGVNQT 213 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + VV + MI G G+G Y+ I+ D+ L ++ + + D+L Sbjct: 214 IMMALSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265 Score = 80.4 bits (197), Expect = 9e-13, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 77/235 (32%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F + + A G + + F +L + ++G T+ V+ + + Sbjct: 42 GLAAVPFVAMLVFLVAFALWRRGVVFSIFVGLALLAIHYMGLWAQTVSTLALVIAATVFS 101 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW + ++ + PA V+ V + + + Sbjct: 102 LVIGVPLGIWGARNKRVEMVLRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATIVF-- 159 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G + E SF T + + LP P + G A Sbjct: 160 --AMPPVVRLTTLGIRQVREELLEAGRSFGSTDAQLLWKVQLPNALPSIMAGVNQTIMMA 217 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +V+ + G GLG Y+ ++ G L + + L+R Sbjct: 218 LSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265 >gi|271969470|ref|YP_003343666.1| ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270512645|gb|ACZ90923.1| ABC-type transporter, permease protein [Streptosporangium roseum DSM 43021] Length = 272 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 10/191 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R + +A ++ IP+G+ IG+ ++ + P +L A P+ V + Sbjct: 81 ASLIRSLAGFALAIVVAIPLGLLIGWYKPVADLLNPVLELFRNTAALALLPVFVLILGLG 140 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++++ W IL N +AG + + A S + R ++ +ILP P Sbjct: 141 ETSK----ISIILYACAWPILLNTVAGVKSVDPLLIKSARSMGLRPVRLFQKVILPAAVP 196 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG A + + +E+ GLG I + P++ G+L + Sbjct: 197 TIFTGIRLAGAYSILVLVAAEMVG------AKAGLGYLITYAQFNFRVPDMYAGILTISV 250 Query: 565 FVLALNRFLWH 575 L N+ L Sbjct: 251 LGLLFNQLLVR 261 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 84/206 (40%), Gaps = 14/206 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L + + +R L+ ++++ L + + +L P+L++ ++ L Sbjct: 70 LLSGELLDHTQASLIRSLAGFALAIVVAIPLGLLIGWYKPVADLLNPVLELFRNTAALAL 129 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L V+ E + I I + W + + + ++ L + +RS L Sbjct: 130 LPVFVLILGLG--------ETSKISIILYACAWPILLNTVAGVKSVDPLLIKSARSMGLR 181 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + F + +P ++P + + ++ + +VA+EM+ G+G I A Sbjct: 182 PVRLFQKVILPAAVPTIFTGIRLAGAYSILVLVAAEMVGAKA------GLGYLITYAQFN 235 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261 + + +LT+ + L++QLL R Sbjct: 236 FRVPDMYAGILTISVLGLLFNQLLVR 261 >gi|255693778|ref|ZP_05417453.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides finegoldii DSM 17565] gi|260620401|gb|EEX43272.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides finegoldii DSM 17565] Length = 275 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L I I+ + + I + + L + +T +LS+ ++L Sbjct: 41 LFGIPFYITILILAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVLSSTCLAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A S R +L P+LD+MQ++P +L V++F G V G IF Sbjct: 101 IVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGL---GAVPGVFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + WQ + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 85.0 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 84/236 (35%), Gaps = 16/236 (6%) Query: 342 YMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIII 396 ++L F + + +AW G FT +L + +G T+ V+ + Sbjct: 39 HILFGIPFYITILILAALAWMKAGRGTAIFTALGLLLIYGMGFWEATMQTLALVLSSTCL 98 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I+ +P+G+W P ++P L+ PA V+ V + + Sbjct: 99 ALIVGVPLGVWTANSPRAEKILRPVLDLMQTMPAFVYLIPAVLFFGLGAVPGVFATIIF- 157 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 ++ G P + E + SF T W+ + LP P +TG Sbjct: 158 ---AMPPVVRLTGLGIRQVPKNVVEASRSFGATRWQLLYKVQLPLALPTILTGVNQTIMM 214 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + + G + + + L+R Sbjct: 215 SLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|325519241|gb|EGC98695.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. TJI49] Length = 95 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 63/95 (66%), Positives = 73/95 (76%) Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 ILFNVIAGA ++PND+KE +F I GW+WWR ILPGIFPYYVTGAITA GGAWNASIV Sbjct: 1 ILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIV 60 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 SE WG + GLGAYIA+ T G FP+++LG Sbjct: 61 SEFVQWGDTKVVAHGLGAYIAQMTAAGDFPKIILG 95 Score = 83.4 bits (205), Expect = 9e-14, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 45/95 (47%) Query: 150 MTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVA 209 + F++ + P D +E +++FR+ GWQ + +P P V + + G W + Sbjct: 1 ILFNVIAGAMSYPNDYKEATKNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIV 60 Query: 210 SEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 SE + GDT + G+G+YIA D I+ Sbjct: 61 SEFVQWGDTKVVAHGLGAYIAQMTAAGDFPKIILG 95 >gi|238763748|ref|ZP_04624707.1| Taurine ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] gi|238698050|gb|EEP90808.1| Taurine ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] Length = 287 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 94/275 (34%), Gaps = 27/275 (9%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL 382 I P + + ++ VV A Q I + Q + ++ + Sbjct: 18 ITHPTPRKITRRSLATKGFWLSIATLVSVVALWWAVTALQLISPLFLPAPQQVLHQLLVI 77 Query: 383 G--------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 ++ R+++ ++ A + +P GI +G + + P ++ Sbjct: 78 ASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPV 137 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P + PL+V + LL+ I +AG + A + Sbjct: 138 PPLAYLPLMVIWFGIGETSK----ILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGA 193 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + W+ ++ILP P +TG G W+ + +E+ + T GLG + + E Sbjct: 194 SRWQVLWFVILPSALPEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGE 247 Query: 549 KGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + V+ G+ ++ + R + L + Sbjct: 248 FLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPW 282 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 105/248 (42%), Gaps = 17/248 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L V + +I+ L + + + +V P +L Q+ + + R+L A++ ++ Sbjct: 49 LWWAVTALQLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVA 108 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + VL P+++I + +P L +L V++F E + I Sbjct: 109 LGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 160 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + +T + + ++ + +R+ S WQ W++ +P ++P ++ + + + Sbjct: 161 IYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLG 220 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258 GW +VA+E+I G+G + A + ++ + + + F L + Sbjct: 221 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRA 274 Query: 259 LFRPMIVW 266 + R + W Sbjct: 275 IQRRLTPW 282 >gi|167031273|ref|YP_001666504.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] gi|166857761|gb|ABY96168.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas putida GB-1] Length = 279 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 96/278 (34%), Gaps = 15/278 (5%) Query: 308 PLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC-GVAIGIAWQSIGY 366 P++ R +R ++ + + + + + + Sbjct: 7 PVAGKHDTQARPAAKLRRPLSTRWISTLTLTSLLLAWWLVTAAGWIEPLFLPSPGDILAR 66 Query: 367 IVNHFTYQDVLYVIWL-GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 T + +W ++ R+ + ++ A++ IPVGI IG+ + P + Sbjct: 67 AWTLLTQGYMDASLWQHLGASLGRIGLALLAATLTAIPVGIAIGYNRVARGILDPLIEFY 126 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PL+V L+ LL+ I G A S Sbjct: 127 RPIPPLAYLPLIVIWCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQS 182 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 T + R++ILP P +TG G W+ + +E+ + T+GLG + Sbjct: 183 LGATKAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQS 236 Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + + VVLG+L++ AL R L L + Sbjct: 237 AAQFLVTDVVVLGILLIALIAFALEMSLRALQRKLVPW 274 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+ + R+ A++ + L +R +L P+++ + IP L +L Sbjct: 78 ASLWQHLGASLGRIGLALLAATLTAIPVGIAIGYNRVARGILDPLIEFYRPIPPLAYLPL 137 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ EL+ + I+ + + + + + ++S + Q Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATKAQ 189 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 190 LIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 244 DVVVLGILLIALIAFALEMSLRALQRKLVPWH 275 >gi|194292746|ref|YP_002008653.1| aliphatic sulphonate ABC transporter, permease protein [Cupriavidus taiwanensis LMG 19424] gi|193226650|emb|CAQ72601.1| putative aliphatic sulphonate ABC transporter, permease protein [Cupriavidus taiwanensis LMG 19424] Length = 281 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 92/244 (37%), Gaps = 20/244 (8%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 QL S+QR L F + AWQ + ++ +++RV Sbjct: 42 WQLASSQRAHLGLVTFANVPAPSDVVPAAWQLL----------QSPKLVLHLGNSLYRVF 91 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 A+ I +G+ IG + + P ++L P + PL + L+ Sbjct: 92 AGFGAAAAAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAILMFPSSELS---- 147 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 + + G + IL N I G A S W + ++LP P VTG Sbjct: 148 MIFITFIGALFPILLNTIHGVERTDPRLIATARSLGARRWTVFPEVLLPAALPSIVTGLA 207 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 G +W + +E+ + + G+G Y E+ ++ ++V+G+L++ F + + Sbjct: 208 IGMGTSWFCLVTAEMIAGQY------GIGYYTWEAYNLQNYADIVVGMLLIGAFGMGSSA 261 Query: 572 FLWH 575 + Sbjct: 262 LIKR 265 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 14/219 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P D+V L L + + R+ + + V +SR L +L+P Sbjct: 61 PAPSDVVPAAWQLLQSPKLVLHLGNSLYRVFAGFGAAAAAGIVLGMAIGRSRWLEDLLLP 120 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L++++ IP + ++ ++ F +EL+ IF F ++ + + + Sbjct: 121 PLEVLRPIPGVAWIPLAILMF--------PSSELSMIFITFIGALFPILLNTIHGVERTD 172 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L +RS W F + +P ++P +V + + M WF +V +EMI Sbjct: 173 PRLIATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAG------Q 226 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GIG Y A Q+ I+ ML + L+ R Sbjct: 227 YGIGYYTWEAYNLQNYADIVVGMLLIGAFGMGSSALIKR 265 >gi|118472106|ref|YP_888794.1| binding-protein-dependent transporters inner membrane component [Mycobacterium smegmatis str. MC2 155] gi|118173393|gb|ABK74289.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium smegmatis str. MC2 155] Length = 265 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 20/256 (7%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------- 377 + P ++ +R + + + + ++ Q V+ Sbjct: 7 RNGPTTAGEVSWQRRCAPPITAILIAIALWWSATSVLSGPESVLRQTAPQHVVPALSGLL 66 Query: 378 ---YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 ++ ++++R+ + + +A++I +P+G+ IG P L + Sbjct: 67 ERQVLLGDLGVSLWRLSIGLAVATVIGMPLGLLIGSSRIAERAGGPIIAFLRMISPLSWT 126 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P+ ++ N + L+ W +L N AG A VA SFH T W Sbjct: 127 PIALAVFGIG----NQPVVFLVAVAAVWPVLLNTAAGVRAVDPGLLNVARSFHATRWEMM 182 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 +ILP I + TG A G AW + +E+ +GLG I + ++ ++ + Sbjct: 183 LAVILPAIRTHVQTGIRLALGVAWIVLVPAEMLG------VRSGLGYQILNARDQLAYDQ 236 Query: 555 VVLGVLIMCCFVLALN 570 VV ++++ L+ Sbjct: 237 VVAVIVVIGILGFLLD 252 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 90/248 (36%), Gaps = 17/248 (6%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHG---IQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 RR P I +L + + +L G + T P+ +V + L+ L + Sbjct: 20 RRCAPPITAILIAIALWWSATSVLSGPESVLRQTAPQHVVPALSGLLERQVLLGDLGVSL 79 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R+ + ++ + L SR PI+ ++ I L + + F Sbjct: 80 WRLSIGLAVATVIGMPLGLLIGSSRIAERAGGPIIAFLRMISPLSWTPIALAVFGIGNQP 139 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 V +A VW + + + + L V+RSF + W+ + +P Sbjct: 140 VVFLVAVA--------AVWPVLLNTAAGVRAVDPGLLNVARSFHATRWEMMLAVILPAIR 191 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 + + +++ W +V +EM+ V G+G I A + ++ ++ + Sbjct: 192 THVQTGIRLALGVAWIVLVPAEMLGV------RSGLGYQILNARDQLAYDQVVAVIVVIG 245 Query: 250 GVIFLYDQ 257 + FL D Sbjct: 246 ILGFLLDT 253 >gi|298290858|ref|YP_003692797.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296927369|gb|ADH88178.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 301 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 23/279 (8%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R + L + + + + GV A ++ Sbjct: 30 PERQSAAPQARKTGRRFALPARVWIPLATLAGFLALWWGVTAYGAVPALFLPSPQAVATR 89 Query: 376 VLYVIWLGCI----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + ++ G + ++FRV + A +I +P G IG + P + L Sbjct: 90 LWRLVTEGFVDATLAQHLAASLFRVFAALAAALVIGVPAGFAIGLSTVGRGILDPIVEFL 149 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P + PLV+ L++ I+ AG + VA + Sbjct: 150 RPIPPLAYLPLVIIWAGIG----ESAKVLVIALAMLPPIIIATAAGTRGVDGNRLNVARA 205 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 T + R ++LP P +TG A G W+ + +E+ + T G+G I Sbjct: 206 LGATRAQLLRLVVLPSASPSILTGTRIALGAGWSTLVAAELVA------ATRGVGFMIQS 259 Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLYG 581 + + VV G+ ++ A R + + Sbjct: 260 AANFLATDVVVAGIFLIAAVAFAFECAVRLIERTFVGWA 298 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 101/264 (38%), Gaps = 22/264 (8%) Query: 14 RIFPNIFDLLAFVLVI-GIINILLHGIQETTVPRDIVD----IVPITLDVHSLPQYASRT 68 R++ + L F+ + G+ P+ + +V +L Q+ + + Sbjct: 51 RVWIPLATLAGFLALWWGVTAYGAVPALFLPSPQAVATRLWRLVTEGFVDATLAQHLAAS 110 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+ +A+ +L+ S +L PI++ ++ IP L +L +++ Sbjct: 111 LFRVFAALAAALVIGVPAGFAIGLSTVGRGILDPIVEFLRPIPPLAYLPLVIIWAGIG-- 168 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E A + I + + + + + + V+R+ + Q + +P + Sbjct: 169 ------ESAKVLVIALAMLPPIIIATAAGTRGVDGNRLNVARALGATRAQLLRLVVLPSA 222 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 P ++ +++ GW +VA+E++ G+G I A ++ + + Sbjct: 223 SPSILTGTRIALGAGWSTLVAAELVA------ATRGVGFMIQSAANFLATDVVVAGIFLI 276 Query: 249 LGVIFLY---DQLLFRPMIVWSNK 269 V F + +L+ R + W+ K Sbjct: 277 AAVAFAFECAVRLIERTFVGWAGK 300 >gi|33603283|ref|NP_890843.1| putative transport system permease protein [Bordetella bronchiseptica RB50] gi|33577407|emb|CAE34672.1| putative transport system permease protein [Bordetella bronchiseptica RB50] Length = 265 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++FR +V I + +P G++ G+ + + + P + P F P+ V Sbjct: 73 GASLFRALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGL 132 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L++F Y + AGA + P + A S +T + + ++ P Sbjct: 133 GEMGK----VVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTKLQIFWRVVFPSSI 188 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ TG A +W + +E+ GLG I+++ + P V +G+ ++ Sbjct: 189 PHIFTGLKVAMALSWAVVVAAELVGAQK------GLGFMISDAAQLFQIPVVFIGIALIG 242 Query: 564 CFVLALNRFL 573 L LN L Sbjct: 243 LIGLVLNVML 252 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 93/247 (37%), Gaps = 19/247 (7%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-----LPQYASRTTLRM 72 ++ ++ + + ++ L + +TL L + + R Sbjct: 20 SVASVVGLLAIWTLVTNLGLVGPGYLPSPQAMFAQLVTLVEQGYGGKPLWDHVGASLFRA 79 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L I +L + + + +G ++ PI+ ++ IP + F+ V+YF Sbjct: 80 LVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGLG------ 133 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 E+ + I + S ++P + S ++ Q FW + P S+P + Sbjct: 134 --EMGKVVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTKLQIFWRVVFPSSIPHI 191 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + ++M+ W VVA+E++ G+G I+ A + + + + + + Sbjct: 192 FTGLKVAMALSWAVVVAAELVG------AQKGLGFMISDAAQLFQIPVVFIGIALIGLIG 245 Query: 253 FLYDQLL 259 + + +L Sbjct: 246 LVLNVML 252 >gi|320186469|gb|EFW61197.1| L-proline glycine betaine ABC transport system permease protein ProW [Shigella flexneri CDC 796-83] Length = 354 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 ALP-----PIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 F Q+ + +F +G+ ++ ++ + + V Sbjct: 97 FQQVLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLAL----V 152 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + ++ +I +P+GIW+ P + I+P + PA V+ +V N+ Sbjct: 153 LTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NV 208 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 ++ I I+ I G + P D E + SF + + + LP P + G Sbjct: 209 PGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGV 268 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A + +++ + + G GLG + + +G + + + L+ Sbjct: 269 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILD 321 Query: 571 RF 572 R Sbjct: 322 RL 323 >gi|284990967|ref|YP_003409521.1| binding-protein-dependent transport systems inner membrane component [Geodermatophilus obscurus DSM 43160] gi|284064212|gb|ADB75150.1| binding-protein-dependent transport systems inner membrane component [Geodermatophilus obscurus DSM 43160] Length = 258 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 23/243 (9%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI------WLG-------CIT 386 ++ +L F + + W + F + + ++ WLG + Sbjct: 1 MTPVLRRVGFALGLPAVLLTLWWVLSADSTDFYFPPLPRILETLVREWLGPRLTDDVLPS 60 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + R+ +A++ + +GI IG + ++P +L A P V P+ + Sbjct: 61 LLRLAAGFSVAAVSAVTLGILIGTYRGLRDFLEPVLELTRAIPPPVLVPIFILVFGI--- 117 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + +++ FG W IL N G A + A ++ ITG R+++LPG P Sbjct: 118 -DDTMKVIVIAFGCVWPILLNTAEGVRALDGVLDDTARTYGITGAARLRHLVLPGAAPQI 176 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G A A ++SE+ + T GLG I ++ + PE+ G+L++ Sbjct: 177 FAGLRQALSLAIILMVISELFA------ATNGLGFAIVQAQRSFAIPEMWAGMLVLGLIG 230 Query: 567 LAL 569 L Sbjct: 231 FLL 233 Score = 96.9 bits (240), Expect = 9e-18, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 97/239 (40%), Gaps = 16/239 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + + +++ +PR + +V L L + LR+ + ++ + Sbjct: 16 AVLLTLWWVLSADSTDFYFPPLPRILETLVREWLGPR-LTDDVLPSLLRLAAGFSVAAVS 74 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 L R L L P+L++ ++IP + ++ F KVI I Sbjct: 75 AVTLGILIGTYRGLRDFLEPVLELTRAIPPPVLVPIFILVFGIDDTMKVI--------VI 126 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 VW + + + + + L++ +R++ ++G + +L +P + P + + ++S Sbjct: 127 AFGCVWPILLNTAEGVRALDGVLDDTARTYGITGAARLRHLVLPGAAPQIFAGLRQALSL 186 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 +V SE+ + G+G I A + + + +A + +LG+I L+FR Sbjct: 187 AIILMVISELFAATN------GLGFAIVQAQRSFAIPEM-WAGMLVLGLIGFLLSLVFR 238 >gi|15600288|ref|NP_253782.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9951390|gb|AAG08480.1|AE004922_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 283 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L++ I+ + +P ++ + + L +T ML A IS+L Sbjct: 54 LLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVATFISVLIGIPL 113 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 LAA+S RL VL+P+LDIMQ++P +L ++ F ++ AIFA Sbjct: 114 GILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--------KVPAIFATVIYA 165 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + ++ E +F + WQ+ + + +P ++P ++ + + Sbjct: 166 APPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSM 225 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + + I+ ++ L A L ++ + + D++ Sbjct: 226 VVIASMI-------GARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRI 270 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 86/245 (35%), Gaps = 17/245 (6%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TM 387 L + + +L + ++ + IAW + ++ +L+++ + T+ Sbjct: 37 LWAIVNLEGLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTL 96 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 ++V I+ +I IP+GI + + + P ++ P+ V+ V+ Sbjct: 97 ALMLVATFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLG--- 153 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 + + ++ G ++ E ++F W+ + LP P + Sbjct: 154 -KVPAIFATVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIM 212 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G A + +++ + GLG + + + + + L + + Sbjct: 213 AGINQTTMMALSMVVIASMIG-------ARGLGEDVLVGIQTLNVGKGLEAGLAIVILAV 265 Query: 568 ALNRF 572 ++R Sbjct: 266 VIDRI 270 >gi|295695730|ref|YP_003588968.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] gi|295411332|gb|ADG05824.1| binding-protein-dependent transport systems inner membrane component [Bacillus tusciae DSM 2912] Length = 274 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 20/258 (7%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-- 383 P + V + ++ G G++ D+L W Sbjct: 14 KHPIRNRMEFLERPVPGWVAPLGILILLGAWQGVSMAGWVSASALPAPSDILRDGWEMVR 73 Query: 384 --------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ +I + + +G+ +G + P L P P Sbjct: 74 GGELWPELYASLVRIVLGFVIGAAAGVTIGVLLGISRLAEAVGLPVVNSLYPIPKIAILP 133 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L++ + ++ ++ G + ++FN +G + A SF R Sbjct: 134 LIMLWLGIGEISK----VTVIAVGVAFPMIFNTYSGVRNADPLLVKAAVSFGAGRGDLIR 189 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 +ILPG P V G + G + + +E+ + G+GA I + + V Sbjct: 190 KVILPGALPTIVAGLRISVGTSLLLLVAAEMIA------AEHGIGALILKYSNLMMTTRV 243 Query: 556 VLGVLIMCCFVLALNRFL 573 ++GV+++ L NR L Sbjct: 244 MVGVVVLSILGLLFNRLL 261 Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 90/245 (36%), Gaps = 15/245 (6%) Query: 16 FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + +L + +++ P DI+ + L + +R++ Sbjct: 31 WVAPLGILILLGAWQGVSMAGWVSASALPAPSDILRDGWEMVRGGELWPELYASLVRIVL 90 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 VI L SR V +P+++ + IP + L +++ Sbjct: 91 GFVIGAAAGVTIGVLLGISRLAEAVGLPVVNSLYPIPKIAILPLIMLWLGIG-------- 142 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E++ + I + M F+ Y + N L + + SF + +P ++P +V Sbjct: 143 EISKVTVIAVGVAFPMIFNTYSGVRNADPLLVKAAVSFGAGRGDLIRKVILPGALPTIVA 202 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + +S+ +VA+EMI GIG+ I ++ ++ + + L Sbjct: 203 GLRISVGTSLLLLVAAEMIA------AEHGIGALILKYSNLMMTTRVMVGVVVLSILGLL 256 Query: 255 YDQLL 259 +++LL Sbjct: 257 FNRLL 261 >gi|82545240|ref|YP_409187.1| glycine betaine transporter membrane protein [Shigella boydii Sb227] gi|81246651|gb|ABB67359.1| ProW [Shigella boydii Sb227] gi|332092004|gb|EGI97082.1| glycine betaine/L-proline transport system permease protein proW [Shigella boydii 3594-74] Length = 354 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|328886810|emb|CCA60049.1| ABC-type nitrate or sulfonate or bicarbonate transport system, permease component [Streptomyces venezuelae ATCC 10712] Length = 333 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 95/274 (34%), Gaps = 19/274 (6%) Query: 300 YSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI 359 + + V+ L R L L + + + + +G Sbjct: 63 KAPASTAPRARRLVRALARGLKAAGLRSAALLALLAVWEAAPRLGLVDATFLPPVSVVGE 122 Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 AW + ++ ++ R + IA + +P+G+ IG+ +++ + Sbjct: 123 AWWELL---------GNGQLVEHTSASLTRSLGGFGIAVAVAVPLGLLIGWYRPVAAVLG 173 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P ++ A P+ V + + ++++ W IL N I+ Sbjct: 174 PLLEVFRNTAALALLPVFVLLLGIGETSK----VSIVVYACVWPILLNTISAVGNADPTL 229 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 + S ++ R ++ +ILP P TG A + + +E+ GL Sbjct: 230 IRLGRSMDLSTPRLFQKVILPASVPAVFTGIRLAGAVSILVLVAAEMIG------AKAGL 283 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G I S + P++ G++ + +A N+ L Sbjct: 284 GYLINASQFNFAIPQMYAGIITISAIGVAFNQLL 317 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 17/214 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L ++ S + R L I++ L R + VL P+L++ ++ L Sbjct: 128 LGNGQLVEHTSASLTRSLGGFGIAVAVAVPLGLLIGWYRPVAAVLGPLLEVFRNTAALAL 187 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L V+ KV + + VW + + ++ N L + RS LS Sbjct: 188 LPVFVLLLGIGETSKVS--------IVVYACVWPILLNTISAVGNADPTLIRLGRSMDLS 239 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + F + +P S+P + + ++ + +VA+EMI G+G I + Sbjct: 240 TPRLFQKVILPASVPAVFTGIRLAGAVSILVLVAAEMIGAKA------GLGYLINASQFN 293 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL---FRPMIVW 266 + + ++T+ + ++QLL R + +W Sbjct: 294 FAIPQMYAGIITISAIGVAFNQLLVTVERRLSLW 327 >gi|326204042|ref|ZP_08193903.1| binding-protein-dependent transport systems inner membrane component [Clostridium papyrosolvens DSM 2782] gi|325985809|gb|EGD46644.1| binding-protein-dependent transport systems inner membrane component [Clostridium papyrosolvens DSM 2782] Length = 255 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +M+R + ++A+ I +G+ +G+ + S + P QL+ +FP +V Sbjct: 57 ASMYRFFIGYLLAAFAGITLGLVLGWFRNAWSFVNPVVQLVRPISPIAWFPFIVLLFGIG 116 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L + + + F +L + + +VA +F I IILP FP Sbjct: 117 DLPAIIIIFIAAFF----PVLLTTVNAVGKVDQTYIKVAKNFGIGQPHLLTKIILPSAFP 172 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +G A G AW + E+ TGLG I ++ ++ G+L + Sbjct: 173 VIASGLHIALGTAWVFLVAGEMVG------AQTGLGFMIIDARNNLRADLLLAGILSIGL 226 Query: 565 FVLALNRFL 573 L L+ F+ Sbjct: 227 IGLVLDSFI 235 Score = 99 bits (248), Expect = 1e-18, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 88/238 (36%), Gaps = 14/238 (5%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + +L G +++ P D+ + +L + R +++ Sbjct: 12 TILLLLWQGAVSLGHWNQALLPSPVDVGRGFGELISEGTLFTGVKASMYRFFIGYLLAAF 71 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + R + P++ +++ I + + F V+ F +L AI Sbjct: 72 AGITLGLVLGWFRNAWSFVNPVVQLVRPISPIAWFPFIVLLFGIG--------DLPAIII 123 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF + + + + ++ + + +V+++F + + +P + P + + +++ Sbjct: 124 IFIAAFFPVLLTTVNAVGKVDQTYIKVAKNFGIGQPHLLTKIILPSAFPVIASGLHIALG 183 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 W F+VA EM+ G+G I A +L +L++ + + D + Sbjct: 184 TAWVFLVAGEMVGAQT------GLGFMIIDARNNLRADLLLAGILSIGLIGLVLDSFI 235 >gi|89894101|ref|YP_517588.1| hypothetical protein DSY1355 [Desulfitobacterium hafniense Y51] gi|89333549|dbj|BAE83144.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 259 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I++ R + + + IP+G+ IG+ + P Q+ P P+ V Sbjct: 64 ISLMRSLSGFTLGMFVAIPLGLVIGWFKKAEVFLYPLLQVFRNMPTLALLPVFVMFFGIG 123 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++++++G W L N IAG + A S + R + ++LP P Sbjct: 124 EFSK----TMVILWGVLWATLLNTIAGVRNVDPQLIKAARSMGVGSLRLFGTVVLPASLP 179 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 Y G + + I +E+ + GLG + PE+ +++M Sbjct: 180 YIFAGMRISATVSILILIAAEMMG------ASKGLGYALFFYQSNFKIPEMYAVLIVMAV 233 Query: 565 FVLALNRFL 573 F + LN L Sbjct: 234 FGVTLNYTL 242 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 15/241 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISL 80 ++ F+L+ I L P V L L ++ S + +R LS + + Sbjct: 18 IIVFILIWEICARLEIFNPVFFPPFSKVVKALYGLAASGELWKHCSISLMRSLSGFTLGM 77 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + ++ + L P+L + +++P L L V++F E + Sbjct: 78 FVAIPLGLVIGWFKKAEVFLYPLLQVFRNMPTLALLPVFVMFFGIG--------EFSKTM 129 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 I +W + + N+ L + +RS + + F + +P S+P + M +S Sbjct: 130 VILWGVLWATLLNTIAGVRNVDPQLIKAARSMGVGSLRLFGTVVLPASLPYIFAGMRISA 189 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF 260 + ++A+EM+ G+G + + + ++ M + L Sbjct: 190 TVSILILIAAEMMGASK------GLGYALFFYQSNFKIPEMYAVLIVMAVFGVTLNYTLE 243 Query: 261 R 261 + Sbjct: 244 K 244 >gi|326386847|ref|ZP_08208462.1| taurine ABC transporter, permease protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208650|gb|EGD59452.1| taurine ABC transporter, permease protein [Novosphingobium nitrogenifigens DSM 19370] Length = 259 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 15/241 (6%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVLYVIWL- 382 P S + +L ++W G+ + Q +G +V+ + V +W Sbjct: 5 PRGSHAGSSALMLGSLLALWWAVTASGLISPLFLPGPGQILGRVVDLARHGFVGASLWQH 64 Query: 383 GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 ++ RV + ++ A I IP G+ +G P +++ + P + P + PL+V Sbjct: 65 AAASLARVGLAMLFAVITAIPAGMAMGLFPRVNAALDPLIEFYRPVPPLAYLPLIVIWFG 124 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 + +L+ + +G D A S + + ++ P Sbjct: 125 IGEVTK----VILIYMAIFAPLAIATASGVRRVDPDRIRAARSLGASRDQIAWLVVFPSA 180 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P +TG A G W+ + +E+ + T GLG + +++ VV G+L++ Sbjct: 181 LPDILTGLRIALGVGWSTLVAAELVA------ATRGLGFMVQSASQMLVTDVVVAGILVI 234 Query: 563 C 563 Sbjct: 235 A 235 Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 80/191 (41%), Gaps = 14/191 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL Q+A+ + R+ AM+ +++ R+ L P+++ + +P L +L Sbjct: 59 ASLWQHAAASLARVGLAMLFAVITAIPAGMAMGLFPRVNAALDPLIEFYRPVPPLAYLPL 118 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E+ + I+ + + + + + D +RS S Q Sbjct: 119 IVIWFGIG--------EVTKVILIYMAIFAPLAIATASGVRRVDPDRIRAARSLGASRDQ 170 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 W + P ++P ++ + +++ GW +VA+E++ G+G + A + Sbjct: 171 IAWLVVFPSALPDILTGLRIALGVGWSTLVAAELVA------ATRGLGFMVQSASQMLVT 224 Query: 239 LAILYAMLTML 249 ++ +L + Sbjct: 225 DVVVAGILVIA 235 >gi|298375042|ref|ZP_06984999.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_19] gi|298267542|gb|EFI09198.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_19] Length = 274 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 LL I I + + ++ I ++ ++L + +T +LS+ ++L Sbjct: 41 LLGIPFYITIAILTFLALYKSGRGTGIFTLLGLSLIYGMGFWEETMQTLALVLSSTGMAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L A S R +L P+LD MQ++P +L V++F G V GA IF Sbjct: 101 LLGIPLGIWMAGSGRCNKILQPVLDCMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + L +P+++ E +RSF + Q + + +P ++P ++ + ++ Sbjct: 158 A-----LPPVARLTALGLRQVPKNVVEAARSFGATPSQLLFKVELPLALPTILAGINQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + + I + + + ++ + + D++ Sbjct: 213 MMSLSMVVVAAMISAG-------GLGEVVLIGITQMKIGMGFEGGIAVVILAIVLDRI 263 Score = 78.4 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L F + + +A G FT + + +G T+ V+ +A Sbjct: 40 VLLGIPFYITIAILTFLALYKSGRGTGIFTLLGLSLIYGMGFWEETMQTLALVLSSTGMA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 ++ IP+GIW+ + +QP + PA V+ V + + Sbjct: 100 LLLGIPLGIWMAGSGRCNKILQPVLDCMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 + G P + E A SF T + + LP P + G + Sbjct: 158 --ALPPVARLTALGLRQVPKNVVEAARSFGATPSQLLFKVELPLALPTILAGINQTIMMS 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +V+ + S G GLG + + G + + + L+R Sbjct: 216 LSMVVVAAMISAG-------GLGEVVLIGITQMKIGMGFEGGIAVVILAIVLDRI 263 >gi|84501939|ref|ZP_01000097.1| taurine ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84389934|gb|EAQ02568.1| taurine ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 264 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 80/249 (32%), Gaps = 10/249 (4%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 + +S+ I + + + + + Sbjct: 12 APRRRWSPNNFTWAALSFAGGIGLWWLATVGGLSELPSPWAVLTRMIELALDGQLWEDTF 71 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV++ ++ S+I +P G +G+ + I P+ Q P PL + + Sbjct: 72 ASLRRVMIGFVLGSVIAVPTGFLMGWYRVARAVIDPWVQFFRVIPPLAIIPLAIVTMGI- 130 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ + + G + + A + +I+P P Sbjct: 131 ---DETPKIFVIFLAAFLSAVVSTYQGVVSVDKTYINAARVLGANDRVIFTQVIIPASTP 187 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + + G G AW + +E+ + +GLG + ++ P + + ++ + Sbjct: 188 FILVGFRIGLGSAWATVVAAELIA------AQSGLGFRMQQAQLYYDLPTIFVSLVAIGI 241 Query: 565 FVLALNRFL 573 L ++R + Sbjct: 242 LGLIMDRIV 250 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 96/262 (36%), Gaps = 22/262 (8%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLH---GIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 RR PN F A GI L G+ E P ++ + L + + Sbjct: 14 RRRWSPNNFTWAALSFAGGIGLWWLATVGGLSELPSPWAVLTRMIELALDGQLWEDTFAS 73 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R++ V+ + L R V+ P + + IP L + +V Sbjct: 74 LRRVMIGFVLGSVIAVPTGFLMGWYRVARAVIDPWVQFFRVIPPLAIIPLAIVTMGIDET 133 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 K IF IF + + S YQ + ++ + +R + F + +P S Sbjct: 134 PK--------IFVIFLAAFLSAVVSTYQGVVSVDKTYINAARVLGANDRVIFTQVIIPAS 185 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 P ++ + + W VVA+E+I G+G + A DL I +++ + Sbjct: 186 TPFILVGFRIGLGSAWATVVAAELIA------AQSGLGFRMQQAQLYYDLPTIFVSLVAI 239 Query: 249 LGVIFLYDQLLFRPMIVWSNKF 270 + + D+ ++VW+ ++ Sbjct: 240 GILGLIMDR-----IVVWAEEW 256 >gi|304406543|ref|ZP_07388199.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304344601|gb|EFM10439.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 278 Score = 121 bits (303), Expect = 5e-25, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV+ I + +P+G+WIG + + P +L P + P+ + Sbjct: 88 AVSAARVLSGIALGFAAAVPLGMWIGLTRIGRNGLYPSLELFRPIPLIAYLPVAMLLFKT 147 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + G + IL + A + A + + LP + Sbjct: 148 IEGG----IVFITFIGAFFPILISSRDAARRVSPSLIQAARVLGCGPVQAIWRVYLPAMA 203 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TG G +W I E+ S TG+G ++ + + ++G+ + Sbjct: 204 PEIFTGLSVGIGASWMGVITGEMMSG------QTGIGYTTWQAYHLLDYDQSIIGMFTIG 257 Query: 564 CFVL---ALNRFLWHPLYLY 580 A R + L + Sbjct: 258 ALGFGSSACIRLVERLLLRW 277 Score = 111 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 79/226 (34%), Gaps = 17/226 (7%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P IV + L S + + R+LS + + +R L P L Sbjct: 67 PAAIVSAWYVNLGAESYYTDIAVSAARVLSGIALGFAAAVPLGMWIGLTRIGRNGLYPSL 126 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 ++ + IP++ +L ++ F + G +F F + + S + + Sbjct: 127 ELFRPIPLIAYLPVAMLLFKTIEGG--------IVFITFIGAFFPILISSRDAARRVSPS 178 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L + +R Q W + +P P + + + + W V+ EM+ G Sbjct: 179 LIQAARVLGCGPVQAIWRVYLPAMAPEIFTGLSVGIGASWMGVITGEMMSGQT------G 232 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMIVWS 267 IG A D + M T+ + F +L+ R ++ W Sbjct: 233 IGYTTWQAYHLLDYDQSIIGMFTIGALGFGSSACIRLVERLLLRWQ 278 >gi|295096321|emb|CBK85411.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 263 Score = 121 bits (303), Expect = 5e-25, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 83/239 (34%), Gaps = 17/239 (7%) Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391 R + +V +A W S + + + + + I+ +R V Sbjct: 11 RAAPWFLPVGIVLVWQLASSTGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAV 70 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 + I I + +G+ G + Q+L P PLV+ Sbjct: 71 IGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGI----DESA 126 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 L+ GT + I N G E+A S+ ++G+ + ++ILPG P + G Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFTHVILPGALPSIMVGVR 186 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 105/264 (39%), Gaps = 18/264 (6%) Query: 18 NIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 F + VLV + + + P +V+ L Q+ + ++ R + Sbjct: 14 PWFLPVGIVLVWQLASSTGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAVIGF 73 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 I ++ SR +L + +++++P L + +++F E Sbjct: 74 SIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ES 125 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 A IF + ++ + + + + NI R L E++RS+ LSG+ F ++ +P ++P ++ + Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFTHVILPGALPSIMVGV 185 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 ++ W ++ +E I GIG A + ++ A++ + L D Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239 Query: 257 ---QLLFRPMIVWSNKFRLERTTG 277 Q L R + W+ + + Sbjct: 240 VSAQWLERSWLRWNPAYTAQEAKA 263 >gi|111017295|ref|YP_700267.1| ABC transporter, permease component [Rhodococcus jostii RHA1] gi|110816825|gb|ABG92109.1| ABC transporter, permease component [Rhodococcus jostii RHA1] Length = 287 Score = 121 bits (303), Expect = 5e-25, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 91/271 (33%), Gaps = 23/271 (8%) Query: 315 KLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ 374 R Q +R + + V V +G W S ++ Sbjct: 7 AAPRPTRAEPTGEDRRRPQRAVTRRRLQPSVLLPWVVPVLVILGWQWASSAGAISPSVLP 66 Query: 375 DVLYVIWLG-------------CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPF 421 V+ +++ R+++ + + I + +G +G + Sbjct: 67 PPSKVLATAEQLWTAGELQRHLTVSLRRILIGFTLGASIGLVLGFVVGLSRIAEGLVDRT 126 Query: 422 AQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKE 481 Q+L A P PL+++ L +L+ G + + N +AG + Sbjct: 127 LQMLRALPHLALVPLLIAAFGIGELPK----VVLVTLGVIFPVYLNTVAGIRTVDPKLVQ 182 Query: 482 VASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGA 541 + S+ + R II+PG P +TG A G AW +++E + + G+G Sbjct: 183 LGESYGLGRGARIRDIIVPGAMPMILTGIRYALGVAWLTLVIAETIA------TSEGIGF 236 Query: 542 YIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +VL +L+ L ++ Sbjct: 237 LAQNGRDMLRNDRIVLAILLYAVAGLLADQI 267 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 94/271 (34%), Gaps = 22/271 (8%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-----TTVPRDIVDIVPITLDVHSLPQ 63 RR+ P++ +++ + P ++ L + Sbjct: 27 AVTRRRLQPSVLLPWVVPVLVILGWQWASSAGAISPSVLPPPSKVLATAEQLWTAGELQR 86 Query: 64 YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYF 123 + + + R+L + V + SR ++ L +++++P L + + F Sbjct: 87 HLTVSLRRILIGFTLGASIGLVLGFVVGLSRIAEGLVDRTLQMLRALPHLALVPLLIAAF 146 Query: 124 MNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYL 183 KV+ L IF ++ + + + L ++ S+ L + + Sbjct: 147 GIGELPKVVLVTLGVIFPVY--------LNTVAGIRTVDPKLVQLGESYGLGRGARIRDI 198 Query: 184 GVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILY 243 VP +MP ++ + ++ W +V +E I + GIG I+ Sbjct: 199 IVPGAMPMILTGIRYALGVAWLTLVIAETIATSE------GIGFLAQNGRDMLRNDRIVL 252 Query: 244 AMLTMLGVIFLYDQ---LLFRPMIVWSNKFR 271 A+L L DQ L+ ++ W+ ++ Sbjct: 253 AILLYAVAGLLADQITRLIEARVLRWNPHYQ 283 >gi|320173466|gb|EFW48665.1| L-proline glycine betaine ABC transport system permease protein ProW [Shigella dysenteriae CDC 74-1112] Length = 354 Score = 121 bits (303), Expect = 5e-25, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+ ++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTTLLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTTLLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|157159068|ref|YP_001463988.1| glycine betaine transporter membrane protein [Escherichia coli E24377A] gi|187731166|ref|YP_001881570.1| glycine betaine transporter membrane protein [Shigella boydii CDC 3083-94] gi|191167100|ref|ZP_03028921.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli B7A] gi|209920122|ref|YP_002294206.1| glycine betaine transporter membrane protein [Escherichia coli SE11] gi|218555226|ref|YP_002388139.1| glycine betaine transporter membrane protein [Escherichia coli IAI1] gi|218696275|ref|YP_002403942.1| glycine betaine transporter membrane protein [Escherichia coli 55989] gi|260856789|ref|YP_003230680.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O26:H11 str. 11368] gi|293448996|ref|ZP_06663417.1| glycine betaine transporter membrane protein [Escherichia coli B088] gi|300815919|ref|ZP_07096143.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300916826|ref|ZP_07133530.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|309795137|ref|ZP_07689556.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|331678656|ref|ZP_08379330.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H591] gi|157081098|gb|ABV20806.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E24377A] gi|187428158|gb|ACD07432.1| glycine betaine/L-proline ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|190902882|gb|EDV62610.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli B7A] gi|209913381|dbj|BAG78455.1| glycine/betaine/proline ABC transporter permease component [Escherichia coli SE11] gi|218353007|emb|CAU98825.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218361994|emb|CAQ99600.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|257755438|dbj|BAI26940.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O26:H11 str. 11368] gi|291322086|gb|EFE61515.1| glycine betaine transporter membrane protein [Escherichia coli B088] gi|300415892|gb|EFJ99202.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300531848|gb|EFK52910.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|308121108|gb|EFO58370.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|320198430|gb|EFW73032.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli EC4100B] gi|323154889|gb|EFZ41081.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli EPECa14] gi|323183204|gb|EFZ68601.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 1357] gi|323946350|gb|EGB42379.1| inner membrane transport system [Escherichia coli H120] gi|324020307|gb|EGB89526.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324120037|gb|EGC13914.1| inner membrane transport system [Escherichia coli E1167] gi|331073486|gb|EGI44807.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H591] Length = 354 Score = 121 bits (303), Expect = 5e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 87.3 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|256842287|ref|ZP_05547791.1| choline ABC transporter, permease [Parabacteroides sp. D13] gi|262384806|ref|ZP_06077938.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_1_33B] gi|256736171|gb|EEU49501.1| choline ABC transporter, permease [Parabacteroides sp. D13] gi|262293522|gb|EEY81458.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_1_33B] Length = 277 Score = 121 bits (303), Expect = 5e-25, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 16/239 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVIS 79 L + I+ + L + + + + L +T +LS+ +I+ Sbjct: 40 GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L+ A+S R ++ P+LD+MQ++P +L V++F G V GA I Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGL---GPVPGAFATVI 156 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 FA+ + + +P D+ E +RSF + Q + + +P ++P ++ + + Sbjct: 157 FAMP-----PVVRLTDLGIRQVPADIVEATRSFGATSSQLLYKVQLPLALPTIMTGVNQT 211 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + VV + MI G G+G + I + + + ++ + + D++ Sbjct: 212 IMLSLSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 79/235 (33%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F V+ +AW G V FT +L + +G T+ V+ IIA Sbjct: 40 GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW I P L+ PA V+ V + + Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G P D E SF T + + LP P +TG + Sbjct: 158 --AMPPVVRLTDLGIRQVPADIVEATRSFGATSSQLLYKVQLPLALPTIMTGVNQTIMLS 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + S G GLG + + G + + + L+R Sbjct: 216 LSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|294085008|ref|YP_003551768.1| putative taurine uptake ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664583|gb|ADE39684.1| probable taurine uptake ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 642 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 10/172 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++FRV+V + + ++ +P+GI++G S P +L P + PL+++ Sbjct: 451 SLFRVIVALTLGILLGVPLGIYMGVSRFFKSFFDPLIELYRPVPPLAWAPLILTIFGIQD 510 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ ++ + GAS + S T + R++ILP P Sbjct: 511 DGK----IFLLFMVAFAIMVISARTGASGTQLSKIRASHSLGATNQQIMRHVILPNAMPE 566 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +TG A G W + +E+ + TTGLG + + + + Sbjct: 567 ILTGIRIAVGVCWGTLVAAEMLAG------TTGLGFIENVARTVADYELIWV 612 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 94/255 (36%), Gaps = 25/255 (9%) Query: 16 FPNIFDLLAFVLVIGIINIL-----LHGIQETTVP------RDIVDIVPITLDVHSLPQY 64 + +I D++AF++ G+++ L HG P + + L + Sbjct: 388 WLSIADVVAFLIPDGLVDALPGSYGTHGTAGEFKPNYKDKLLAVAQGDVYLGSIPMLDGH 447 Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 + R++ A+ + +L SR P++++ + +P L + + F Sbjct: 448 IWDSLFRVIVALTLGILLGVPLGIYMGVSRFFKSFFDPLIELYRPVPPLAWAPLILTIFG 507 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 GK IF +F M S S S + Q ++ Sbjct: 508 IQDDGK--------IFLLFMVAFAIMVISARTGASGTQLSKIRASHSLGATNQQIMRHVI 559 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +MP ++ + +++ W +VA+EM+ G+G +A D I Sbjct: 560 LPNAMPEILTGIRIAVGVCWGTLVAAEMLAGTT------GLGFIENVARTVADYELIWVT 613 Query: 245 MLTMLGVIFLYDQLL 259 ++ + + L+D ++ Sbjct: 614 IILLGMLGLLFDIIM 628 >gi|77456482|ref|YP_345987.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gi|77380485|gb|ABA71998.1| taurine ABC transport system, permease protein [Pseudomonas fluorescens Pf0-1] Length = 279 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 87/264 (32%), Gaps = 27/264 (10%) Query: 334 LCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT------- 386 + + + + + + + + VL WL T Sbjct: 21 PVRRSLSTRWISLLTLFALLVIWWAVTASGLIEPLFLPPPSAVLQKGWLLATTGYMDSTL 80 Query: 387 -------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 + R+ + + A + +PVGI IG + P + P + PL+V Sbjct: 81 WQHLGASLSRIGLGLGFAILTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPLIVI 140 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 L+ LL+ I G A S T + R++IL Sbjct: 141 WCGIGELSK----VLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVIL 196 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P +TG G W+ + +E+ + T+GLG + + + VVLG+ Sbjct: 197 PSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVTDVVVLGI 250 Query: 560 LIMCCFVLALN---RFLWHPLYLY 580 L++ A+ R L L + Sbjct: 251 LVIALIAFAMEMGLRALQRKLVPW 274 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 85/212 (40%), Gaps = 17/212 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + R+ + ++L +R VL P+++ + IP L +L Sbjct: 78 STLWQHLGASLSRIGLGLGFAILTAVPVGIAIGANRIARGVLDPLIEFYRPIPPLAYLPL 137 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++ EL+ + I+ + + + + + ++S + Q Sbjct: 138 IVIWCGIG--------ELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQ 189 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 ++ +P ++P ++ + + + GW +VA+E+I G+G + A + Sbjct: 190 LIRHVILPSALPDILTGVRIGLGVGWSTLVAAELIA------ATSGLGFMVQSAAQFLVT 243 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 ++ +L + + F + + L R ++ W Sbjct: 244 DVVVLGILVIALIAFAMEMGLRALQRKLVPWH 275 >gi|193071017|ref|ZP_03051945.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E110019] gi|192955675|gb|EDV86150.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E110019] Length = 354 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 87.3 bits (215), Expect = 7e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|126727926|ref|ZP_01743752.1| binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium HTCC2150] gi|126702786|gb|EBA01893.1| binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium HTCC2150] Length = 444 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 10/162 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV+ + + IP+G +G + P + + P PL++ Sbjct: 253 SLARVVIGFGLGCLFGIPLGFAMGLNNWMRGWFDPIVEFMRPVPPLALIPLIIIWFGIGE 312 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ + W + AG S A S T + +ILP P Sbjct: 313 QGK----ISLLFLASLWIMTIAARAGVSGVNISKVHAAYSLGATKRQLLSKVILPNSLPE 368 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 TGA A G W + +E+ + G+G I ++ Sbjct: 369 IFTGARVAMGVCWGTVVAAELVAAEK------GVGKMIIAAS 404 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 14/173 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + + R++ + LF + + PI++ M+ +P L + Sbjct: 245 GLWENVFWSLARVVIGFGLGCLFGIPLGFAMGLNNWMRGWFDPIVEFMRPVPPLALIPLI 304 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W MT + + + + S + Q Sbjct: 305 IIWFGIGEQGK--------ISLLFLASLWIMTIAARAGVSGVNISKVHAAYSLGATKRQL 356 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 + +P S+P + ++M W VVA+E++ G+G I A Sbjct: 357 LSKVILPNSLPEIFTGARVAMGVCWGTVVAAELVA------AEKGVGKMIIAA 403 >gi|91780168|ref|YP_555375.1| nitrate/nitrite/cyanate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692828|gb|ABE36025.1| ABC nitrate/nitrite/cyanate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 277 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 84/201 (41%), Gaps = 13/201 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ ++ R+ + + A +I +P+G IG + + P Q L + P+ V Sbjct: 81 LLVHIATSLRRIAIGLAWALLIGVPLGFLIGRIKAFDTALSPTLQFLRMISPLSWMPIAV 140 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + L+ F W ++ + AG + + ++A S T +I Sbjct: 141 MSLGVGDR----AVYFLLAFAAVWPLVMSTAAGVTQIDRRWLQLAESLAATRGEMLWHIF 196 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +PG+ + +TG A G W + +E+ ++GLG I ++ ++ ++ E+ Sbjct: 197 VPGLAAHVLTGVRLAIGILWIVLVPAEMLG------VSSGLGYLILDTRDRLAYSELTAV 250 Query: 559 VLIMCCFVLALN---RFLWHP 576 +L++ L+ R ++ Sbjct: 251 ILVIGALGFLLDYAARLIYRR 271 Score = 98.5 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 86/246 (34%), Gaps = 17/246 (6%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTL 70 R + L V + + L+ P + +P + L + + + Sbjct: 31 RTLLGLTGLAGIVAIWWLAIHLIARPDSLAAQFSPGRALAALPSLVTEDRLLVHIATSLR 90 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R+ + +LL L + + L P L ++ I L ++ V+ Sbjct: 91 RIAIGLAWALLIGVPLGFLIGRIKAFDTALSPTLQFLRMISPLSWMPIAVMSLGVG---- 146 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 + A F + + VW + S + I R +++ S + + W++ VP Sbjct: 147 ----DRAVYFLLAFAAVWPLVMSTAAGVTQIDRRWLQLAESLAATRGEMLWHIFVPGLAA 202 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ + +++ W +V +EM+ V G+G I + +L + Sbjct: 203 HVLTGVRLAIGILWIVLVPAEMLGVSS------GLGYLILDTRDRLAYSELTAVILVIGA 256 Query: 251 VIFLYD 256 + FL D Sbjct: 257 LGFLLD 262 >gi|326317135|ref|YP_004234807.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373971|gb|ADX46240.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] Length = 289 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 103/268 (38%), Gaps = 20/268 (7%) Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL- 382 R + + F VA + S ++ + T ++++ Sbjct: 30 RRRLRPLEPVAPRTRWLLGAAFFVLFVAAWSVATLGGYVSPTFLASPVTMVQEGWLLFTQ 89 Query: 383 ------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +T++RV+ +A+++ +P+GI +G + + ++PF PA+ F PL Sbjct: 90 FGFLHDIGMTVWRVLGGFALAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPL 149 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ L L++ G+ + I+ V + D E A + T R Sbjct: 150 LILWAGLGELQK----LLVIFIGSVFQIILMVAVTVGSARKDLVEAAYTLGATPTGIVRR 205 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++PG P+ G AW IV+E+ ++G+G I +S + +++ Sbjct: 206 VLIPGAAPHIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQII 259 Query: 557 LGVLIMCCFVLALNRFLW---HPLYLYG 581 G++++ L + L+ + Sbjct: 260 FGIIVIGVIGLVSDFLFKALNRRLFAWS 287 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 91/270 (33%), Gaps = 18/270 (6%) Query: 2 FLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHS 60 L + P R + FV + + + P +V + Sbjct: 32 RLRPLEPVAPRTRWLLGAAFFVLFVAAWSVATLGGYVSPTFLASPVTMVQEGWLLFTQFG 91 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 T R+L ++ L + + L P + + +P F+ + Sbjct: 92 FLHDIGMTVWRVLGGFALAALVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLI 151 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++ EL + IF V+ + + ++ + +DL E + + + Sbjct: 152 LWAGLG--------ELQKLLVIFIGSVFQIILMVAVTVGSARKDLVEAAYTLGATPTGIV 203 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P + P + + + + W +V+ +E+I GIG I + + Sbjct: 204 RRVLIPGAAPHIAETLRLVLGWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQ 257 Query: 241 ILYAMLTMLGVIFLYDQL---LFRPMIVWS 267 I++ ++ + + + D L L R + WS Sbjct: 258 IIFGIIVIGVIGLVSDFLFKALNRRLFAWS 287 >gi|302522994|ref|ZP_07275336.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78] gi|302431889|gb|EFL03705.1| nitrate ABC transporter, permease [Streptomyces sp. SPB78] Length = 247 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 81/211 (38%), Gaps = 13/211 (6%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ RV++ ++ ++ +PVG +G+ P + + ++P+ Q A P PL Sbjct: 47 GSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPL 106 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + ++ + + + G +A + A + Sbjct: 107 AIVLLGIGET----PKVFVIFLASFLATVVAALQGVTATDRTLIDAARVLGAPDRVIFLK 162 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++P P+ + GA G +W + +E+ + GLG + + P + Sbjct: 163 VVIPASTPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIF 216 Query: 557 LGVLIMCCFVLALNRFLWHP---LYLYGTRC 584 +G+L + L ++R L L + R Sbjct: 217 VGLLTIGVVGLVMDRLLLRAERHLTSWQERR 247 Score = 111 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 17/240 (7%) Query: 33 NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92 + G+ + P + + SL + R+L V+ ++ L Sbjct: 21 VLAATGLVDVPGPWPVARRAGEMIADGSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGW 80 Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 + +L P + +++P L + +V K +F IF + Sbjct: 81 YPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGETPK--------VFVIFLASFLATVV 132 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + Q + R L + +R F + +P S P L+ + + W +VA+E+ Sbjct: 133 AALQGVTATDRTLIDAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAEL 192 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269 I G+G + A DL I +LT+ V + D+LL R + W + Sbjct: 193 IA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLRAERHLTSWQER 246 >gi|307729437|ref|YP_003906661.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] gi|307583972|gb|ADN57370.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1003] Length = 285 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 93/251 (37%), Gaps = 17/251 (6%) Query: 12 SRRIFPNIFDLL----AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 +R P++ + AF + + + P + + +L + Sbjct: 27 KKRRLPDLRGFVLPALAFAIWWAVSAVHGGKGGLLVTPEQVWHTTWQQIMSGALAKALGA 86 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R S I + SR ++ P D + I + ++ V+F Sbjct: 87 SLAREASGFAIGTVLGLALGISLGLSRLASRMIGPSFDTFKQISLFAWIPLISVWFGLGD 146 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 KV+ LAA+ + + +PR E +R FR + WQ W++ +P Sbjct: 147 AAKVVFLSLAALLPVAAHTC--------DGIHAVPRSYVEAARVFRYTRWQLVWHVILPA 198 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + + +++ W + +E ++V + GIG+ + + + +L+ ++ Sbjct: 199 ALPSIFTGLYLALIYSWLATLGAEYLLVAGS-----GIGNTLIDGSENFRMDLVLFGIVV 253 Query: 248 MLGVIFLYDQL 258 + + L L Sbjct: 254 VGVIGSLLSGL 264 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 85/246 (34%), Gaps = 11/246 (4%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLY--VIWLGCIT 386 + L + + W+ V V H T+Q ++ + + Sbjct: 28 KRRLPDLRGFVLPALAFAIWWAVSAVHGGKGGLLVTPEQVWHTTWQQIMSGALAKALGAS 87 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + R I +++ + +GI +G S I P + PL+ Sbjct: 88 LAREASGFAIGTVLGLALGISLGLSRLASRMIGPSFDTFKQISLFAWIPLISVWFGLGDA 147 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 ++LS + + G A P + E A F T W+ ++ILP P Sbjct: 148 AKVVFLS----LAALLPVAAHTCDGIHAVPRSYVEAARVFRYTRWQLVWHVILPAALPSI 203 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 TG A +W A++ +E + +G+G + + +E V+ G++++ Sbjct: 204 FTGLYLALIYSWLATLGAEYLL-----VAGSGIGNTLIDGSENFRMDLVLFGIVVVGVIG 258 Query: 567 LALNRF 572 L+ Sbjct: 259 SLLSGL 264 >gi|301629375|ref|XP_002943818.1| PREDICTED: probable ABC transporter permease protein BruAb2_1124-like [Xenopus (Silurana) tropicalis] Length = 274 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 13/204 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T++RVV ++A+ I +P+GI +G + + ++PF PA+ F PL++ Sbjct: 81 GMTVWRVVGGFVLAASIAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLLILWAGL 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L L++ G+ + I+ V D E A + T R +++PG Sbjct: 141 GELQK----LLVIFIGSVFQIILMVAVIVGNARKDLVEAAYTLGATHGGIVRRVLIPGAA 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I +S + +++ G++I+ Sbjct: 197 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMITDSQALLNTGQIIFGIIIIG 250 Query: 564 CFVLALN---RFLWHPLYLYGTRC 584 L + +F+ L+++ Sbjct: 251 LIGLVSDSFFKFVNRRLFVWSALR 274 Score = 86.9 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 80/229 (34%), Gaps = 17/229 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P + + T R++ V++ + + L Sbjct: 57 LASPITMAKEGWLLFTEFDFLHDIGMTVWRVVGGFVLAASIAVPLGIAMGAHKGVEAFLE 116 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + + +P F+ +++ EL + IF V+ + + + N Sbjct: 117 PFVSFCRYLPASAFIPLLILWAGLG--------ELQKLLVIFIGSVFQIILMVAVIVGNA 168 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 +DL E + + + + +P + P + + + + W +V+ +E+I Sbjct: 169 RKDLVEAAYTLGATHGGIVRRVLIPGAAPDIAETLRLVLGWAWTYVIVAELIGSSS---- 224 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 GIG I + + I++ ++ + + + D + + R + VWS Sbjct: 225 --GIGHMITDSQALLNTGQIIFGIIIIGLIGLVSDSFFKFVNRRLFVWS 271 >gi|296125208|ref|YP_003632460.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Brachyspira murdochii DSM 12563] gi|296017024|gb|ADG70261.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] Length = 264 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 97/245 (39%), Gaps = 18/245 (7%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD----VHSLPQYASRTTLRMLS 74 I + F++V ++ T P ++ + +++ ++ + + R+L+ Sbjct: 19 IISIAGFLIVWQLLTTYTPIKITTPKPLEVFKFLLWSINHNIGQQTILGHVLISIFRVLA 78 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 I + + ++ + V+ P ++ + IP + ++ +++F Sbjct: 79 GFAIGAVTGIILGISMGVNKYVRAVVRPFFEVFRQIPPIAWIPMAILWFGIG-------- 130 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E+ IF IF N+T + Y + L ++ + F ++ +P S+P + Sbjct: 131 EVPKIFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNDRDIFLHVILPASVPQIFN 190 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 M + S W V+A+EM+ G+G I ++ +L M+T+ V L Sbjct: 191 GMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIRGSDTANIPQVLAGMITIGIVGLL 244 Query: 255 YDQLL 259 L+ Sbjct: 245 LSSLM 249 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 78/195 (40%), Gaps = 10/195 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ I++FRV+ I ++ I +GI +G ++ + ++PF ++ P + P+ + Sbjct: 65 ILGHVLISIFRVLAGFAIGAVTGIILGISMGVNKYVRAVVRPFFEVFRQIPPIAWIPMAI 124 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++ GT + N AG+S A + ++I Sbjct: 125 LWFGIG----EVPKIFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNDRDIFLHVI 180 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P G +W + +E+ S G+G I ++ + P+V+ G Sbjct: 181 LPASVPQIFNGMQVGFSVSWMGVLAAEMVS------SFAGVGWVIIRGSDTANIPQVLAG 234 Query: 559 VLIMCCFVLALNRFL 573 ++ + L L+ + Sbjct: 235 MITIGIVGLLLSSLM 249 >gi|296125207|ref|YP_003632459.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Brachyspira murdochii DSM 12563] gi|296017023|gb|ADG70260.1| binding-protein-dependent transport systems inner membrane component [Brachyspira murdochii DSM 12563] Length = 277 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 10/196 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D + ++ + + + I IP+GI + + + P L+ P + Sbjct: 78 PDNGTLFQHILASLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAW 137 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+++ S ++ + N +G A VA +F + + Sbjct: 138 IPMMILWFGIGLG----AKSAIVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRGQM 193 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + + +P PY TG + G +W + +E+ + + GLG I + + Sbjct: 194 LKEVAIPTALPYIFTGLRVSLGASWTSLCAAEMLA------ASRGLGFMIQLNRQLARAD 247 Query: 554 EVVLGVLIMCCFVLAL 569 +++G+L + L Sbjct: 248 LIIVGMLTIGAVGAIL 263 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 90/248 (36%), Gaps = 21/248 (8%) Query: 15 IFPNIFDLLAFVLVIGII--NILLHGIQETTVPRDIVDIVPITL-----DVHSLPQYASR 67 ++ ++ F+++ +I L P + L D +L Q+ Sbjct: 30 FIISVISVVIFLIIWQLITDVFKLFPSYSLPSPYTVFKSFIYKLTNKAPDNGTLFQHILA 89 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + L+ + A ++ +V P+ D+++ IP + ++ +++F Sbjct: 90 SLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAWIPMMILWFGIGL 149 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K +F S + Y + + V+++F S Q + +P Sbjct: 150 GAKSA--------IVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRGQMLKEVAIPT 201 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + + +S+ W + A+EM+ G+G I L + I+ MLT Sbjct: 202 ALPYIFTGLRVSLGASWTSLCAAEMLAAS------RGLGFMIQLNRQLARADLIIVGMLT 255 Query: 248 MLGVIFLY 255 + V + Sbjct: 256 IGAVGAIL 263 >gi|302554989|ref|ZP_07307331.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] gi|302472607|gb|EFL35700.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] Length = 304 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 88/226 (38%), Gaps = 10/226 (4%) Query: 41 ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100 + P D+ ++V L Y + R L +L+ L A+ + + L Sbjct: 78 KLPAPSDVWNVVQTAWLQGELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKVVRAAL 137 Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 PIL +QS+P + ++ V++ I V ++ + + Sbjct: 138 GPILSGLQSLPSVAWVPPAVIWLGLNNSMMYA--------VILLGAVPSIANGLVSGVDQ 189 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 +P R+ +G + W++ +P ++PG V + + W ++A+E+I Sbjct: 190 VPPLFLRAGRTLGATGLKGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--SFPD 247 Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 G+G + D+ + A+L +L V D L+F P+ W Sbjct: 248 LGVGLGQLLENGRNASDMAMVFEAILLILIVGIAIDLLIFSPLERW 293 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 80/207 (38%), Gaps = 6/207 (2%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ R ++ A +I P+G+ + + + + P L + P+ + P Sbjct: 96 GELLGYIWTSVSRGLLGFCFALVIGTPLGLLVARVKVVRAALGPILSGLQSLPSVAWVPP 155 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + N + +++ G I +++G P F + TG + + Sbjct: 156 AVIWLGL----NNSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWH 211 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP P YV G +W + + +E+ + GLG + V Sbjct: 212 IVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNASDMAMVF 269 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583 +L++ +A++ ++ PL + R Sbjct: 270 EAILLILIVGIAIDLLIFSPLERWVLR 296 >gi|113477530|ref|YP_723591.1| glycine betaine ABC transporter substrate-binding protein [Trichodesmium erythraeum IMS101] gi|110168578|gb|ABG53118.1| Substrate-binding region of ABC-type glycine betaine transport system [Trichodesmium erythraeum IMS101] Length = 662 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 93/239 (38%), Gaps = 25/239 (10%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL---PQYASRTTLRMLSAMVIS 79 L F+++ G++ L G R I I+L + + + + +L+A++ Sbjct: 76 LIFLIITGLLVWQLAG-------RKIAIYSFISLCIIGFCGAWEQSMVSLSLILTAVIFC 128 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 +L A S R +L P+LD MQ++P +L V+ F E++ I Sbjct: 129 MLIGIPLGIACALSDRFNKILRPLLDGMQTLPTFVYLVPVVMLFGIG--------EVSGI 180 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 A F V + + + + E + +F + Q + +P ++P ++ + Sbjct: 181 IATFVFAVPPLIRLTNLGIRQVSPEAVEAALAFGSTRQQVLLEVQIPLALPTILAGTNQA 240 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + V + MI V G+G + + ++ L ++ + + D++ Sbjct: 241 ILLALSMSVVTSMIGV-------EGLGQMVLQGLGRLNVGLAAIGGLGIVLIAIMLDRI 292 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 97/272 (35%), Gaps = 18/272 (6%) Query: 308 PLSNNVKKLCRTL-GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI-AWQSIG 365 PL V L L RF F L + R+ + + ++ + G+ WQ G Sbjct: 32 PLEEWVNNLVDFLVDNFRFIFQAISLPISGTLRIVELTFLAIPPLIFLIITGLLVWQLAG 91 Query: 366 YIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 + +++ + + + G +++ ++ +I +I IP+GI + ++P Sbjct: 92 RKIAIYSFISLCIIGFCGAWEQSMVSLSLILTAVIFCMLIGIPLGIACALSDRFNKILRP 151 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P V+ VV ++ + + ++ G + Sbjct: 152 LLDGMQTLPTFVYLVPVVMLFGIGEVSGIIATFVF----AVPPLIRLTNLGIRQVSPEAV 207 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 E A +F T + + +P P + G A A + S+V+ + GLG Sbjct: 208 EAALAFGSTRQQVLLEVQIPLALPTILAGTNQAILLALSMSVVTSMIG-------VEGLG 260 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + + + +G L + + L+R Sbjct: 261 QMVLQGLGRLNVGLAAIGGLGIVLIAIMLDRI 292 >gi|255016499|ref|ZP_05288625.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 2_1_7] Length = 277 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 16/239 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVIS 79 L + I+ + L + + + + L +T +LS+ +I+ Sbjct: 40 GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L+ A+S R ++ P+LD+MQ++P +L V++F G V GA I Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGL---GPVPGAFATVI 156 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 FA+ + + +P D+ E +RSF + Q + + +P ++P ++ + + Sbjct: 157 FAMP-----PVVRLTDLGIRQVPADIVEATRSFGATSTQLLYKVQLPLALPTIMTGVNQT 211 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + VV + MI G G+G + I + + + ++ + + D++ Sbjct: 212 IMLSLSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 79/235 (33%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F V+ +AW G V FT +L + +G T+ V+ IIA Sbjct: 40 GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW I P L+ PA V+ V + + Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G P D E SF T + + LP P +TG + Sbjct: 158 --AMPPVVRLTDLGIRQVPADIVEATRSFGATSTQLLYKVQLPLALPTIMTGVNQTIMLS 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + S G GLG + + G + + + L+R Sbjct: 216 LSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|46580703|ref|YP_011511.1| glycine/betaine/L-proline ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120602005|ref|YP_966405.1| glycine/betaine ABC transporter permease [Desulfovibrio vulgaris DP4] gi|46450122|gb|AAS96771.1| glycine/betaine/L-proline ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562234|gb|ABM27978.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris DP4] gi|311234422|gb|ADP87276.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris RCH1] Length = 283 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 15/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + T +L A ++++ AA + + VL+P+LD+MQ++P +L Sbjct: 88 GLWEATMSTIALVLVATALAVVTGVPLGIAAAVNVTVRKVLMPVLDLMQTMPAFVYLIPA 147 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + +F ++AA+FA + + +P DL E + +F S WQ+ Sbjct: 148 IPFFGLG--------KVAAVFATVVFAMPPAIRFTCLGIRQVPDDLVECAEAFGTSRWQR 199 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 L +P + P ++ + ++ VV + MI G+G + AI+ +L Sbjct: 200 LVKLELPLAAPTILAGVNQTIMLALSMVVIAAMI-------GARGLGGEVWKAIQRLELG 252 Query: 240 AILYAMLTMLGVIFLYDQLL 259 + A + ++ V D++L Sbjct: 253 SGFEAGIGIVIVAICLDRVL 272 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 87/281 (30%), Gaps = 29/281 (10%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 N + + ++ F + N + L LG I + L + + + + Sbjct: 21 NMVEWCSGATRAFSTVAGNGIDMLESLLGSIPPWAFIPVVALLAWRATRKPGIGAFALLG 80 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 G+ + T+ V+V +A + +P+GI Sbjct: 81 FGLIWNLGLWE------------------ATMSTIALVLVATALAVVTGVPLGIAAAVNV 122 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + + P L+ PA V+ + + + + + G Sbjct: 123 TVRKVLMPVLDLMQTMPAFVYLIPAIPFFGLGKVAAVFATVVFAMPPAIRF----TCLGI 178 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P+D E A +F + W+ + LP P + G A + +++ + Sbjct: 179 RQVPDDLVECAEAFGTSRWQRLVKLELPLAAPTILAGVNQTIMLALSMVVIAAMIG---- 234 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 GLG + ++ ++ + + + L+R L Sbjct: 235 ---ARGLGGEVWKAIQRLELGSGFEAGIGIVIVAICLDRVL 272 >gi|37954428|gb|AAP69760.1| ABC transporter component C [Rhodococcus sp. DS7] Length = 290 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 13/218 (5%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + FT + + ++ R + +A I IP+GI I + +S + P +L Sbjct: 79 VVSAFFTLAENGQLQEHVSASLTRALTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELF 138 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 A P+ V + + L+I+ + IL N I+G + A+S Sbjct: 139 RNTAALALLPVFVLILGIGEESK----IALVIYACTFPILLNTISGVRTVDPLLIKSAAS 194 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + R ++ ++LP P TG A + I +E+ GLG I Sbjct: 195 LGFSSIRLFQKVVLPAAVPTIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITA 248 Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 S P + G++ + L +N + L + Sbjct: 249 SQLNFQIPNMYAGIVAISLLGLTINAILVLIERRLSRW 286 Score = 101 bits (253), Expect = 3e-19, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 91/257 (35%), Gaps = 18/257 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRM 72 RI + F+ + L + P V TL + L ++ S + R Sbjct: 44 RIAKPSIAIAIFLGIWEAAPRLGLVDKVFLPPFTEVVSAFFTLAENGQLQEHVSASLTRA 103 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+ +++ A R + L PIL++ ++ L L V+ Sbjct: 104 LTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFVLILGIG------ 157 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 E + I + + + + + + + L + + S S + F + +P ++P + Sbjct: 158 --EESKIALVIYACTFPILLNTISGVRTVDPLLIKSAASLGFSSIRLFQKVVLPAAVPTI 215 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + M+ + ++A+EM+ G+G I + + + ++ + + Sbjct: 216 FTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQLNFQIPNMYAGIVAISLLG 269 Query: 253 FLYD---QLLFRPMIVW 266 + L+ R + W Sbjct: 270 LTINAILVLIERRLSRW 286 >gi|87121997|ref|ZP_01077882.1| glycine betaine/L-proline ABC transporter, permease protein [Marinomonas sp. MED121] gi|86162795|gb|EAQ64075.1| glycine betaine/L-proline ABC transporter, permease protein [Marinomonas sp. MED121] Length = 311 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 16/235 (6%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPIT-LDVHSLPQYASRTTLRMLSAMVISLLFT 83 +IGII L G Q + + +T L + + + T +L+A+ ++ Sbjct: 57 IPPLIGIILSSLLGWQVAGKKMGLFCAITLTILGLIGVWAESMTTLSLVLTALFFCVVIG 116 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L+A+S R+ ++ P+LD MQ++P +L V+ F G V G + IFA Sbjct: 117 VPLGILSARSDRVERLVRPVLDAMQTLPAFVYLVPVVMLFG---IGNVPGVLVTIIFA-- 171 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P D E +R+F + Q + +P + P ++ + ++ Sbjct: 172 ---LPPLVRLTNLGIRQVPEDKIEAARAFGCTPKQMLLKIQLPLATPTIMAGINQTLMLS 228 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + D+L Sbjct: 229 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 276 Score = 78.4 bits (192), Expect = 3e-12, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 16/228 (7%) Query: 350 CVVCGVAIGIAWQSIG-----YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + ++ + WQ G + T ++ V T+ V+ + +I +P+ Sbjct: 60 LIGIILSSLLGWQVAGKKMGLFCAITLTILGLIGVWAESMTTLSLVLTALFFCVVIGVPL 119 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GI + ++P + PA V+ VV N+ L+ I + Sbjct: 120 GILSARSDRVERLVRPVLDAMQTLPAFVYLVPVVMLFGIG----NVPGVLVTIIFALPPL 175 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G P D E A +F T + I LP P + G + + +++ Sbjct: 176 VRLTNLGIRQVPEDKIEAARAFGCTPKQMLLKIQLPLATPTIMAGINQTLMLSLSMVVIA 235 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G + + + L+R Sbjct: 236 SMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 276 >gi|299132877|ref|ZP_07026072.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] gi|298593014|gb|EFI53214.1| binding-protein-dependent transport systems inner membrane component [Afipia sp. 1NLS2] Length = 279 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 108/269 (40%), Gaps = 26/269 (9%) Query: 17 PNIFDLLAFVLVIGIINILLH---------GIQETTVPRDIVDIVPITLDVHSLPQYASR 67 P + A L++ ++ + + P I +++ L ++ Sbjct: 21 PPRWIKPALGLIVPLVVGIGWEIAVARGWSNGRLVPPPSKIYEMLAQLAKSGELSRHVFI 80 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 TT R+ + + ++ + L S +L P L +++IP + ++ V++ Sbjct: 81 TTWRVGAGFGLGVVSGTLLGALCGYSPLARRLLDPTLQALRAIPSIAWVPLFVLWLGIF- 139 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E++ + I + + + ++ ++ R + EV R FRLSG + +P Sbjct: 140 -------EMSKVALIAIGVFFPIYLGVMGAVLSVDRKIVEVGRIFRLSGPAMIRRILLPA 192 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P V ++ + GW FVVA+E++ + G+G + + IL A++ Sbjct: 193 VLPSYVVSLRQGLGLGWMFVVAAELMGASE------GLGYLLIDGQQLGKPAEILAAIIV 246 Query: 248 MLGVIFLYDQLL---FRPMIVWSNKFRLE 273 + D L+ F P++ W + F + Sbjct: 247 FALLGKTTDWLVQLAFAPLLRWQDAFSSQ 275 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 22/255 (8%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI----- 380 P +++ V ++ I W +A+ W + + ++L + Sbjct: 19 SRPPRWIKPALGLIVPLVVGIGWE-----IAVARGWSNGRLVPPPSKIYEMLAQLAKSGE 73 Query: 381 --WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 IT +RV + + +G G+ P + P Q L A P+ + PL V Sbjct: 74 LSRHVFITTWRVGAGFGLGVVSGTLLGALCGYSPLARRLLDPTLQALRAIPSIAWVPLFV 133 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + ++ L+ G + I V+ + EV F ++G R I+ Sbjct: 134 LWLGIFEMSK----VALIAIGVFFPIYLGVMGAVLSVDRKIVEVGRIFRLSGPAMIRRIL 189 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP + P YV G W + +E+ + GLG + + + G E++ Sbjct: 190 LPAVLPSYVVSLRQGLGLGWMFVVAAELMG------ASEGLGYLLIDGQQLGKPAEILAA 243 Query: 559 VLIMCCFVLALNRFL 573 +++ + + Sbjct: 244 IIVFALLGKTTDWLV 258 >gi|282856693|ref|ZP_06265959.1| inner membrane protein [Pyramidobacter piscolens W5455] gi|282585458|gb|EFB90760.1| inner membrane protein [Pyramidobacter piscolens W5455] Length = 300 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 98/233 (42%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L + ++ +L+ + + + + + L Q T +L++++I+L+ Sbjct: 57 PLFLLLVALLVWRARRSLRSGVLYAALVAAIGFAGLWQMMLVTLSVVLASVMIALVIGIP 116 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L + S +L P+LD MQ++P+ +L ++ F VI + A+ + Sbjct: 117 IGILISGSDLANKMLRPVLDTMQTMPVFVYLIPALLLFGTGNASGVIATVIYAVVPVIRL 176 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +++ E +R+F + WQ + + +P + P ++ + ++ Sbjct: 177 --------TSLGIRQVDKEVVEAARAFGSTRWQTLFKVQIPQAKPTIMAGVNQTLMMAMA 228 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + A+ ++ L A ++ + + D++ Sbjct: 229 MVVTTSMIGV-------RGLGMEVLNAVNRIEIGRGLVAGSCVVVLAIVLDRV 274 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 80/234 (34%), Gaps = 17/234 (7%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIW------LGCITMFRVVVLIIIA 397 L + + + + W++ + + Y ++ I + +T+ V+ ++IA Sbjct: 51 LRHVPWPLFLLLVALLVWRARRSLRSGVLYAALVAAIGFAGLWQMMLVTLSVVLASVMIA 110 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I IP+GI I + ++P + P V+ + + + + + + Sbjct: 111 LVIGIPIGILISGSDLANKMLRPVLDTMQTMPVFVYLIPALLLFGTGNASGVIATVIYAV 170 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G + E A +F T W+ + +P P + G A Sbjct: 171 V----PVIRLTSLGIRQVDKEVVEAARAFGSTRWQTLFKVQIPQAKPTIMAGVNQTLMMA 226 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + + GLG + + + ++ + + L+R Sbjct: 227 MAMVVTTSMIG-------VRGLGMEVLNAVNRIEIGRGLVAGSCVVVLAIVLDR 273 >gi|125975273|ref|YP_001039183.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum ATCC 27405] gi|256003068|ref|ZP_05428060.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 2360] gi|281419262|ref|ZP_06250278.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum JW20] gi|125715498|gb|ABN53990.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum ATCC 27405] gi|255992759|gb|EEU02849.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 2360] gi|281407128|gb|EFB37390.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum JW20] gi|316939435|gb|ADU73469.1| binding-protein-dependent transport systems inner membrane component [Clostridium thermocellum DSM 1313] Length = 302 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 76/206 (36%), Gaps = 10/206 (4%) Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 V ++ + + + +A + IP + IG++ + + P ++L Sbjct: 95 VLGLLISELPEFLKGTLSSFQLLFAGYFLALALAIPSALVIGWKKRLYKAVNPLTKVLGP 154 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P V+ P ++ + + + ++ G W + N + G + A + Sbjct: 155 IPPIVYIPYAIAILPTF----KAASTFIIFIGAFWPVFINTLNGVFNVDKRIIDSAKALS 210 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + +ILP P ++GA ++ +E+ T+GLG Y+ + Sbjct: 211 VNEGSMLFQVILPATLPSIISGATVGLVMSFILLTAAEMIG------ATSGLGWYVKYFS 264 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRFL 573 + +P V+ G++ + V + Sbjct: 265 DFADYPRVIAGIIFIGVVVTGVTFLF 290 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 91/248 (36%), Gaps = 17/248 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + ++V I P + + ++ + + + + ++L Sbjct: 67 VYGILIVWEIFTTKTDLADRHLFPSPSSVLGLLISELPEFLKGTLSSFQLLFAGYFLALA 126 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 A + +RL + P+ ++ IP + ++ + + + A+ F Sbjct: 127 LAIPSALVIGWKKRLYKAVNPLTKVLGPIPPIVYIPYAIAIL--------PTFKAASTFI 178 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF W + + + N+ + + + +++ ++ + + +P ++P ++ + + Sbjct: 179 IFIGAFWPVFINTLNGVFNVDKRIIDSAKALSVNEGSMLFQVILPATLPSIISGATVGLV 238 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL--- 258 + + A+EMI G+G Y+ D ++ ++ + V+ L Sbjct: 239 MSFILLTAAEMIG------ATSGLGWYVKYFSDFADYPRVIAGIIFIGVVVTGVTFLFDK 292 Query: 259 LFRPMIVW 266 + R ++ W Sbjct: 293 IERYLLRW 300 >gi|150006771|ref|YP_001301514.1| glycine betaine/L-proline transport system permease [Parabacteroides distasonis ATCC 8503] gi|298377733|ref|ZP_06987684.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_19] gi|301309036|ref|ZP_07214981.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 20_3] gi|149935195|gb|ABR41892.1| glycine betaine/L-proline transport system permease [Parabacteroides distasonis ATCC 8503] gi|298265436|gb|EFI07098.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 3_1_19] gi|300833062|gb|EFK63687.1| glycine betaine/L-proline ABC transporter, permease protein [Bacteroides sp. 20_3] Length = 277 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 16/239 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVIS 79 L + I+ + L + + + + L +T +LS+ +I+ Sbjct: 40 GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L+ A+S R ++ P+LD+MQ++P +L V++F G V GA I Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGL---GPVPGAFATVI 156 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 FA+ + + +P D+ E +RSF + Q + + +P ++P ++ + + Sbjct: 157 FAMP-----PVVRLTDLGIRQVPADIVEATRSFGATSSQLLYKVQLPLALPTIMTGVNQT 211 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + VV + MI G G+G + I + + + ++ + + D++ Sbjct: 212 IMLSLSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 82.7 bits (203), Expect = 2e-13, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 79/235 (33%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F V+ +AW G V FT +L + +G T+ V+ IIA Sbjct: 40 GLTWIPFYVMILGLALLAWFKAGKGVGVFTALGLLLIYGMGFWVETMQTLALVLSSTIIA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW I P L+ PA V+ V + + Sbjct: 100 LMIGVPLGIWTARSDRADKIIHPVLDLMQTMPAFVYLIPAVLFFGLGPVPGAFATVIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G P D E SF T + + LP P +TG + Sbjct: 158 --AMPPVVRLTDLGIRQVPADIVEATRSFGATSSQLLYKVQLPLALPTIMTGVNQTIMLS 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + S G GLG + + G + + + L+R Sbjct: 216 LSMVVIAAMISAG-------GLGEIVLRGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|253576983|ref|ZP_04854306.1| glycine betaine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251843593|gb|EES71618.1| glycine betaine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 281 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 15/203 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 +D T ++++ +IS+LF +A S+ + V+ P+LD MQ++P + Sbjct: 81 IDNLGYWTETMNTLGLVITSGLISILFGIPIGIWSAYSKMVHRVISPLLDFMQTMPAFVY 140 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L V +F G V G + IFAI Y + + +L E + +F + Sbjct: 141 LLPAVTFFSL---GVVPGVIASVIFAIP-----PTIRLTYLGIKQVNGELTEAANAFGST 192 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 WQK + + +P +MP L+ + ++ VV + MI GIG+ + A+ + Sbjct: 193 VWQKLFKVELPLAMPTLMAGVNQTIMLSLSMVVIASMI-------GAQGIGATVYRAVTQ 245 Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258 + A L ++ + + D+ Sbjct: 246 LKIGQGFEAGLAVVVLAIVLDRF 268 Score = 78.8 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 11/224 (4%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWI 408 V + WQ + V F D L T+ V+ +I+ + IP+GIW Sbjct: 56 AIVGIIAYLIGKWQLTLFTVIGFLLIDNLGYWTETMNTLGLVITSGLISILFGIPIGIWS 115 Query: 409 GFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNV 468 + + I P + PA V+ V+ S + + + I + Sbjct: 116 AYSKMVHRVISPLLDFMQTMPAFVYLLPAVTFFSLGVVPGVIASVIFAI----PPTIRLT 171 Query: 469 IAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVAS 528 G + E A++F T W+ + LP P + G + + +++ + Sbjct: 172 YLGIKQVNGELTEAANAFGSTVWQKLFKVELPLAMPTLMAGVNQTIMLSLSMVVIASMIG 231 Query: 529 WGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 G+GA + + + + L + + L+RF Sbjct: 232 -------AQGIGATVYRAVTQLKIGQGFEAGLAVVVLAIVLDRF 268 >gi|170734833|ref|YP_001773947.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gi|169820871|gb|ACA95452.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 275 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 88/263 (33%), Gaps = 27/263 (10%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL------- 377 + R W V VA W + +++ Sbjct: 8 RRSSAPDTRRRGGARFPARSAAGWLGVAGLVATVAVWWAAIHLLTEPGSLGRQFAPDSAF 67 Query: 378 ----------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 ++ +++ R+ V + A + +P+G+ +G + + P Q L Sbjct: 68 ASLRSLCADDQLLEHMLVSLRRIGVGLGAALLAGVPLGLLLGRVRWVERMLSPTFQFLRM 127 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 + PL V + L+ F W +L + AG + + ++ +S Sbjct: 128 VSPLSWMPLAVMSFGIGDR----AIYFLLGFAALWPVLMSTAAGVTQIDRRWLQLGASLA 183 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 T +I+LP I + G A G W + +E+ GLG I ++ Sbjct: 184 ATRRELLVHIVLPAIAGPLLNGIRLAIGILWIVLVPAEMLG------VNAGLGYLILDTR 237 Query: 548 EKGSFPEVVLGVLIMCCFVLALN 570 ++ ++ E+ ++++ L+ Sbjct: 238 DRLAYAELTAVIVVIGALGFTLD 260 Score = 96.9 bits (240), Expect = 8e-18, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETT------VPRDIVDIVPITLDVHSLP 62 R + V + + +H + E P + L Sbjct: 21 ARFPARSAAGWLGVAGLVATVAVWWAAIHLLTEPGSLGRQFAPDSAFASLRSLCADDQLL 80 Query: 63 QYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVY 122 ++ + R+ + +LL L + R + +L P ++ + L ++ V+ Sbjct: 81 EHMLVSLRRIGVGLGAALLAGVPLGLLLGRVRWVERMLSPTFQFLRMVSPLSWMPLAVMS 140 Query: 123 FMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY 182 F + A F + + +W + S + I R ++ S + + + Sbjct: 141 FGIG--------DRAIYFLLGFAALWPVLMSTAAGVTQIDRRWLQLGASLAATRRELLVH 192 Query: 183 LGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 + +P L+ + +++ W +V +EM+ V G+G I + Sbjct: 193 IVLPAIAGPLLNGIRLAIGILWIVLVPAEMLGVNA------GLGYLILDTRDRLAYAELT 246 Query: 243 YAMLTMLGVIFLYD 256 ++ + + F D Sbjct: 247 AVIVVIGALGFTLD 260 >gi|114764393|ref|ZP_01443619.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit [Pelagibaca bermudensis HTCC2601] gi|114543147|gb|EAU46165.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit [Roseovarius sp. HTCC2601] Length = 328 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 98/236 (41%), Gaps = 19/236 (8%) Query: 24 AFVLVIGIINILLHGIQETT-VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 ++++ +I G + V + + ++ D L A T +++A+V+ + Sbjct: 63 LMLILLVLIAWQAAGSRTAIIVGVALTCLGLLSPDAWGL---AMTTLAIVIAAVVVCFVI 119 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 LAAK+ +L P+LD MQ+IP +L V+ G V G + IFA Sbjct: 120 GLPLGILAAKNDTFEKMLRPVLDTMQTIPAFVYLVPVVMLVG---IGNVSGVIVTIIFA- 175 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + + + E +R+F S Q + + +P + P ++ + ++ Sbjct: 176 ----LPPLIRLTSLGIRGVNPSVVEAARAFGASPRQILFKVELPLATPTILAGVNQTIML 231 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G+ + A+ D + L ++ + + D++ Sbjct: 232 SLSMVVIASMISV-------KGLGNEVLRAMGRLDAGKAIVGGLGIVILAIVLDRI 280 Score = 83.8 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 78/233 (33%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 V L + ++ A G I + L T+ V+ +++ + Sbjct: 59 VPPTLMLILLVLIAWQAAGSRTAIIVGVALTCLGLLSPDAWGLAMTTLAIVIAAVVVCFV 118 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GI ++P + PA V+ VV V +++ + + Sbjct: 119 IGLPLGILAAKNDTFEKMLRPVLDTMQTIPAFVYLVPVVMLVGIGNVSGVIVTIIF---- 174 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G E A +F + + + LP P + G + + Sbjct: 175 ALPPLIRLTSLGIRGVNPSVVEAARAFGASPRQILFKVELPLATPTILAGVNQTIMLSLS 234 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + S GLG + + + + ++G L + + L+R Sbjct: 235 MVVIASMIS-------VKGLGNEVLRAMGRLDAGKAIVGGLGIVILAIVLDRI 280 >gi|74310937|ref|YP_309356.1| taurine transporter subunit [Shigella sonnei Ss046] gi|73854414|gb|AAZ87121.1| taurine transport system permease protein [Shigella sonnei Ss046] gi|323164155|gb|EFZ49962.1| taurine transport system permease protein tauC [Shigella sonnei 53G] Length = 275 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + +V+AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSVLAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 104/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S+ + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSVLAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|239630970|ref|ZP_04674001.1| taurine transport system permease protein tauC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527253|gb|EEQ66254.1| taurine transport system permease protein tauC [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 264 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T+ RV V + A I+ IP+G++ + I S I P Q L P ++ L++ + Sbjct: 71 LLTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLILWLGI 130 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ I S +++ A+S W+ + +I P Sbjct: 131 GEASK----VLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFLRVIFPASL 186 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG +A G A+ + +E+ + T+G+G + +++ +++ +++M Sbjct: 187 PAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVMIVDIVVMG 240 Query: 564 CFVLALNRFL 573 + L+ FL Sbjct: 241 ITGMLLDWFL 250 Score = 111 bits (278), Expect = 4e-22, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 Q+ T R+ A+ +++ ++ + +G ++ PI+ ++ IP L + T ++ Sbjct: 67 WQHYLLTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLIL 126 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + E + + +F S + + + Y ++ I + + S + WQ F Sbjct: 127 WLGIG--------EASKVLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFL 178 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + P S+P ++ + ++ + +V++EMI GIG + A + Sbjct: 179 RVIFPASLPAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVM 232 Query: 242 LYAMLTMLGVIFLYDQLL 259 + ++ M L D L Sbjct: 233 IVDIVVMGITGMLLDWFL 250 >gi|300906825|ref|ZP_07124506.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300401426|gb|EFJ84964.1| ABC transporter, permease protein [Escherichia coli MS 84-1] Length = 354 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.9 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|218531939|ref|YP_002422755.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|218524242|gb|ACK84827.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 283 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L Q T + + A +L+ A SRR PILD+MQ++P +L + Sbjct: 87 LWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQTLPSFVYLIPAL 146 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +F ++A FA V + + N+P +L E S +F S QK Sbjct: 147 PFFGLG--------AVSACFATIVFSVPPVIRLTALGIRNVPSELVEASDAFGSSATQKL 198 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P ++ + +M VV + MI G G+G + +I+ + A Sbjct: 199 FKVQLPLALPTIMAGVNQTMMLALSMVVVAAMIGAG-------GLGRAVWQSIQRLEAGA 251 Query: 241 ILYAMLTMLGVIFLYDQL 258 A + ++ V + D++ Sbjct: 252 GFEAGIGIVIVAVILDRV 269 Score = 81.1 bits (199), Expect = 5e-13, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 80/264 (30%), Gaps = 14/264 (5%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--QSIGYIV 368 N + L + + + W C+ + IG + Sbjct: 16 NGLDWLTEHGSWLTRAVSRTVSDWIETLTTALVAIPPWLCIAVAAFAAYRAGGRKIGLLT 75 Query: 369 NHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +W + T+ V + A +I +PVGIW P ++ Sbjct: 76 LVGLLFLWNLRLWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQT 135 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P+ V+ + ++ + + ++ G P++ E + +F Sbjct: 136 LPSFVYLIPALPFFGLGAVSACFATIVF----SVPPVIRLTALGIRNVPSELVEASDAFG 191 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + + + LP P + G A + +V+ + G GLG + +S Sbjct: 192 SSATQKLFKVQLPLALPTIMAGVNQTMMLALSMVVVAAMIGAG-------GLGRAVWQSI 244 Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571 ++ + + + L+R Sbjct: 245 QRLEAGAGFEAGIGIVIVAVILDR 268 >gi|325264233|ref|ZP_08130965.1| nitrate transport permease protein NrtB [Clostridium sp. D5] gi|324030717|gb|EGB92000.1| nitrate transport permease protein NrtB [Clostridium sp. D5] Length = 262 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 13/208 (6%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 ++ I++ RV+V I++S+ VG+ +G + P ++ P + PL + Sbjct: 63 LLGHVGISLSRVLVGYILSSVAGTLVGLIMGASKLGKAIFNPIFNIIKPIPGIAWIPLAI 122 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N+ + ++ G ++ N +AGA + VA + R + I+ Sbjct: 123 LWFGTG----NVTIYFIIFVGGFAQMVMNTMAGAENVSQELIGVARVLGLKKNRIFLTIV 178 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP PY +G + +W A + +E+ + T+G G I + G+ V+G Sbjct: 179 LPSCVPYIFSGLQVSLSTSWMAVLAAEMIT------ATSGCGWLILSGMQSGNMVNNVMG 232 Query: 559 VLIMCCFVLAL---NRFLWHPLYLYGTR 583 ++ + L L R + L + R Sbjct: 233 MISIGIVGLILASFMRVMERRLCSWKER 260 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 106/264 (40%), Gaps = 21/264 (7%) Query: 13 RRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT----LDVHSLPQYASRT 68 + IF + F+++ I ++ P ++ + + ++L + + Sbjct: 11 QTIFIGALGIFTFLVIWQISVMVTRFGTIFPAPFKVLLGMANAVFEPIGKNTLLGHVGIS 70 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L ++S + + + S+ + PI +I++ IP + ++ +++F Sbjct: 71 LSRVLVGYILSSVAGTLVGLIMGASKLGKAIFNPIFNIIKPIPGIAWIPLAILWFGTGN- 129 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 + F IF M + N+ ++L V+R L + F + +P Sbjct: 130 -------VTIYFIIFVGGFAQMVMNTMAGAENVSQELIGVARVLGLKKNRIFLTIVLPSC 182 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + +S+S W V+A+EMI G G I ++ +++ + M+++ Sbjct: 183 VPYIFSGLQVSLSTSWMAVLAAEMIT------ATSGCGWLILSGMQSGNMVNNVMGMISI 236 Query: 249 LGVIFLYD---QLLFRPMIVWSNK 269 V + +++ R + W + Sbjct: 237 GIVGLILASFMRVMERRLCSWKER 260 >gi|320180199|gb|EFW55135.1| L-proline glycine betaine ABC transport system permease protein ProW [Shigella boydii ATCC 9905] Length = 354 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 IIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 II +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IIIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|333023182|ref|ZP_08451246.1| putative nitrate ABC transporter, permease [Streptomyces sp. Tu6071] gi|332743034|gb|EGJ73475.1| putative nitrate ABC transporter, permease [Streptomyces sp. Tu6071] Length = 235 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 80/211 (37%), Gaps = 13/211 (6%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ RV++ ++ ++ +PVG +G+ P + + ++P+ Q A P PL Sbjct: 35 GSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGWYPPVRALLEPYVQFFRAVPPLAIIPL 94 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + ++ + + + G +A A + Sbjct: 95 AIVLLGIGETPK----VFVIFLASFLATVVAALEGVTATDRTLINAARVLGAPDRVIFLK 150 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +++P P+ + GA G +W + +E+ + GLG + + P + Sbjct: 151 VVIPASTPFLLVGARIGLGSSWATLVAAELIAADK------GLGYEMTHAQTYYDLPTIF 204 Query: 557 LGVLIMCCFVLALNRFLWHP---LYLYGTRC 584 +G+L + L ++R L L + R Sbjct: 205 VGLLTIGVVGLVMDRLLLRAERHLTSWQERR 235 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 17/240 (7%) Query: 33 NILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAK 92 + G+ + P + + SL + R+L V+ ++ L Sbjct: 9 VLAATGLVDVPGPWPVARRAGEMIADGSLLTDTLASLRRVLIGFVLGVVLAVPVGFLMGW 68 Query: 93 SRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTF 152 + +L P + +++P L + +V K +F IF + Sbjct: 69 YPPVRALLEPYVQFFRAVPPLAIIPLAIVLLGIGETPK--------VFVIFLASFLATVV 120 Query: 153 SMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEM 212 + + + R L +R F + +P S P L+ + + W +VA+E+ Sbjct: 121 AALEGVTATDRTLINAARVLGAPDRVIFLKVVIPASTPFLLVGARIGLGSSWATLVAAEL 180 Query: 213 IVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRP---MIVWSNK 269 I G+G + A DL I +LT+ V + D+LL R + W + Sbjct: 181 IA------ADKGLGYEMTHAQTYYDLPTIFVGLLTIGVVGLVMDRLLLRAERHLTSWQER 234 >gi|307131481|ref|YP_003883497.1| alkanesulfonates transport system permease [Dickeya dadantii 3937] gi|306529010|gb|ADM98940.1| Alkanesulfonates transport system permease protein [Dickeya dadantii 3937] Length = 263 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 102/253 (40%), Gaps = 18/253 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTF 84 V+V + + + + + + L L Q+ S +T R L+ I Sbjct: 22 VIVWQLASSVGWLSTRILPSPEAIAVTFWRLTRSGELWQHLSISTWRALTGFAIGGALGL 81 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + SR +L + +++++P L + +++F E A IF + Sbjct: 82 ALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGIE--------ESAKIFLVAL 133 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 ++ + + Y + NI L E+SRS+ LSG++ F + +P ++P ++ + S+ W Sbjct: 134 GTLFPVYLNTYHGIRNIDSGLLEMSRSYGLSGFRLFREVLLPGALPSIMVGVRFSLGLMW 193 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFR 261 ++ +E I GIG A + ++ A++ + L D + L R Sbjct: 194 LTLIVAETISASS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVIALTLER 247 Query: 262 PMIVWSNKFRLER 274 + W ++L Sbjct: 248 IWLRWHPSWQLTE 260 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 10/188 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +R + I + + +G G + Q+L P PLV+ Sbjct: 64 ISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGIE 123 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ GT + + N G + E++ S+ ++G+R +R ++LPG P Sbjct: 124 ----ESAKIFLVALGTLFPVYLNTYHGIRNIDSGLLEMSRSYGLSGFRLFREVLLPGALP 179 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G W IV+E S ++G+G + E VV+ +++ Sbjct: 180 SIMVGVRFSLGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVVAIILYAL 233 Query: 565 FVLALNRF 572 + Sbjct: 234 LGKLADVI 241 >gi|163852899|ref|YP_001640942.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|163664504|gb|ABY31871.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] Length = 285 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 91/266 (34%), Gaps = 16/266 (6%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 V I F + L + L WF + A+ + Sbjct: 14 RAVAAPVPRRAGIGARFGASALDRLAPLLGLAGLLALWFAGGLVLGSVPAYAAFAGFAPG 73 Query: 371 FTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + ++ G ++ R+ + +A + P+G+ +G P +QP QL Sbjct: 74 PALASFIELLTSGEAWRAAAPSLARIGQGLAVAFGLGAPLGLLVGSVPLAERILQPPFQL 133 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L + P+ V + + L+ W ILF AG + +A Sbjct: 134 LRMISPLAWMPVAVLAFPSWDG----AIVFLIAAAAIWPILFATAAGVKRVDPVWLAMAR 189 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 + R +I+P + +TG A G AW + +E T+GLG I Sbjct: 190 NLGAGRLAALRAVIVPAVLQDILTGLRLALGVAWIVLVPAEYLG------VTSGLGYAIN 243 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALN 570 ++ + S+ + VL++ AL+ Sbjct: 244 DARDTLSYDRLAALVLLIGGIGYALD 269 Score = 94.2 bits (233), Expect = 6e-17, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 81/238 (34%), Gaps = 14/238 (5%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 F + + ++ + P + L + A+ + R+ + ++ Sbjct: 51 WFAGGLVLGSVPAYAAFAGFAPGPALASFIELLTSGEAWRAAAPSLARIGQGLAVAFGLG 110 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 L +L P +++ I L ++ V+ F + A +F I Sbjct: 111 APLGLLVGSVPLAERILQPPFQLLRMISPLAWMPVAVLAF--------PSWDGAIVFLIA 162 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + +W + F+ + + ++R+ + VP + ++ + +++ Sbjct: 163 AAAIWPILFATAAGVKRVDPVWLAMARNLGAGRLAALRAVIVPAVLQDILTGLRLALGVA 222 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 W +V +E + V G+G I A + +L + G+ + D L R Sbjct: 223 WIVLVPAEYLGV------TSGLGYAINDARDTLSYDRLAALVLLIGGIGYALDTGLGR 274 >gi|188494237|ref|ZP_03001507.1| taurine uptake ABC transporter, permease protein [Escherichia coli 53638] gi|300916138|ref|ZP_07132905.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|188489436|gb|EDU64539.1| taurine uptake ABC transporter, permease protein [Escherichia coli 53638] gi|300416557|gb|EFJ99867.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|332341730|gb|AEE55064.1| taurine transporter protein subunit TauC [Escherichia coli UMNK88] Length = 275 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L PI+++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + +RS S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAARSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|294495023|ref|YP_003541516.1| binding-protein-dependent transporters inner membrane component [Methanohalophilus mahii DSM 5219] gi|292666022|gb|ADE35871.1| binding-protein-dependent transport systems inner membrane component [Methanohalophilus mahii DSM 5219] Length = 276 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L +Y+ T ++S+ ++L+ LAAKS L +L PILD+MQ++P +L V Sbjct: 87 LWEYSMETIALVISSAALALIIGIPLGILAAKSETLYRILRPILDLMQTMPSFVYLIPAV 146 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++F G V G +F++ + + +P +L EV+ +F + WQK Sbjct: 147 IFFGL---GNVPGMIATVVFSMPPA-----IRLTTLGITQVPTELVEVADAFGSTSWQKL 198 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P ++ ++ + + VV + MI G+G + + I+ D+ Sbjct: 199 IKVEIPVALKTIMAGVNQCIMLALSMVVIASMI-------GARGLGYQVLIGIQRVDIGL 251 Query: 241 ILYAMLTMLGVIFLYDQL 258 A L ++ + + D+L Sbjct: 252 GFEAGLGIVIIAIVLDRL 269 Score = 72.6 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 11/191 (5%) Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 T+ V+ +A II IP+GI + ++P L+ P+ V+ V Sbjct: 90 YSMETIALVISSAALALIIGIPLGILAAKSETLYRILRPILDLMQTMPSFVYLIPAVIFF 149 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 ++ + + + + G + P + EVA +F T W+ + +P Sbjct: 150 GLGNVPGMIATVVF----SMPPAIRLTTLGITQVPTELVEVADAFGSTSWQKLIKVEIPV 205 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 + G A + +++ + GLG + ++ L Sbjct: 206 ALKTIMAGVNQCIMLALSMVVIASMIG-------ARGLGYQVLIGIQRVDIGLGFEAGLG 258 Query: 562 MCCFVLALNRF 572 + + L+R Sbjct: 259 IVIIAIVLDRL 269 >gi|54023923|ref|YP_118165.1| putative ABC transporter membrane protein [Nocardia farcinica IFM 10152] gi|54015431|dbj|BAD56801.1| putative ABC transporter membrane protein [Nocardia farcinica IFM 10152] Length = 288 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R + IA I +P+G+ I + ++ + P +L A P+ V + Sbjct: 95 SLGRSLSGFAIALAIAVPLGVAIAWYKPVADLLNPILELFRNTAALALLPVFVLILGIGE 154 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + L+++ + + IL N I G + A+S + R ++ +ILP P Sbjct: 155 TSK----VALVVYASTFPILLNTITGVRTVDPLLIKSAASLGLKPLRLFQKVILPAAIPA 210 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A + + +E+ GLG I + + P + G+L + Sbjct: 211 IFTGLRMAAASSILVLLAAEMVG------ARAGLGYLITAAQQNFQIPNMYAGILAISLL 264 Query: 566 VLALNRFL 573 L+ N L Sbjct: 265 GLSFNGLL 272 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 93/257 (36%), Gaps = 18/257 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRM 72 R +F + AF+ + + + P V + L + + S + R Sbjct: 40 RGVKPLFAIAAFLAIWQLAPQAGLVDEVFLPPFTTVAEAFVDLVRSGEMWTHVSTSLGRS 99 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 LS I+L A + + +L PIL++ ++ L L V+ Sbjct: 100 LSGFAIALAIAVPLGVAIAWYKPVADLLNPILELFRNTAALALLPVFVLILGIG------ 153 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 E + + + + + + + + + L + + S L + F + +P ++P + Sbjct: 154 --ETSKVALVVYASTFPILLNTITGVRTVDPLLIKSAASLGLKPLRLFQKVILPAAIPAI 211 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + M+ + ++A+EM+ G+G I A + + + +L + + Sbjct: 212 FTGLRMAAASSILVLLAAEMVG------ARAGLGYLITAAQQNFQIPNMYAGILAISLLG 265 Query: 253 FLYDQL---LFRPMIVW 266 ++ L L R W Sbjct: 266 LSFNGLLVALERRFSRW 282 >gi|254460294|ref|ZP_05073710.1| glycine betaine/proline ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206676883|gb|EDZ41370.1| glycine betaine/proline ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 657 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 74/544 (13%), Positives = 163/544 (29%), Gaps = 50/544 (9%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 +R +PN+ + + + + + G + +V + + + A +T Sbjct: 92 LFGKRRWPNLGPIPWTAIAASMAVLGYYLGGWKMAA---LVAVTFCWTALVGQWKIAMQT 148 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 ++ A + + A KS L P+L ++Q++P +L V++F Sbjct: 149 MSVLVVAAPTAFIIGLSLGVAAWKSPAFNRALKPVLSVLQTLPFFTYLLPAVIFFKV--- 205 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 G GA I+AI M L + ++ E + Q ++ +P + Sbjct: 206 GPTAGAVATTIYAIP-----PMILMTTLGLQKVSPEVVEAGHMSGCTKLQLLRHVYLPSA 260 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 ++ + ++ +VV I +PG+G+ + + L +T+ Sbjct: 261 RTEILVGVNQ-------VIMLCLAMVVLTAFIGMPGLGAKLLAMMGSFKLGRSFEIGVTI 313 Query: 249 LGVIFLYDQLLFRPMIVWSNKFRLER---------------------TTGIYPADSWVLY 287 + + D++ ++ F S + Sbjct: 314 VLLAVTLDRMSKAWVVKQPEHFERGTPWWKRHIALLLGLGAFVVFCIVAQFIEVASEIGR 373 Query: 288 LFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIF 347 + W R ++ P L +L Sbjct: 374 KQSLSVGKELDTGIKWFLNIEWVKATTGFLRAFVNVQILIPFRNFMLSIPTPAFILLITA 433 Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIW 407 + + G I +V + D IT++ V+ + IA ++ +P+ I Sbjct: 434 FALWLGGRRQAITALIFFSLVALSGWWD------RSVITLYSVISAVSIAMLLGLPIAIL 487 Query: 408 IGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFN 467 S ++ FP+ V+ + ++ + ++ ++ Sbjct: 488 AARTEKWSQRLLLVCDTAQTFPSFVYLIPAIMLFGIT----DIAVIFSILIFAMVPLIRY 543 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 I G P + E A T + + LP P G A A+ I++ Sbjct: 544 TIEGLRTVPPEVIEAAEMSGATRMQKLVNVELPLALPTMAVGFNQAIMFAFFMVIIAAFI 603 Query: 528 SWGH 531 Sbjct: 604 GTQD 607 Score = 88.1 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 94/238 (39%), Gaps = 19/238 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 AF+L+I + L G ++ +V ++ + T ++SA+ I++L Sbjct: 426 AFILLITAFALWLGGRRQAITALIFFSLVALS----GWWDRSVITLYSVISAVSIAMLLG 481 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 A LAA++ + L+ + D Q+ P +L ++ F ++A IF+I Sbjct: 482 LPIAILAARTEKWSQRLLLVCDTAQTFPSFVYLIPAIMLFGI--------TDIAVIFSIL 533 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + L +P ++ E + + QK + +P ++P + ++ Sbjct: 534 IFAMVPLIRYTIEGLRTVPPEVIEAAEMSGATRMQKLVNVELPLALPTMAVGFNQAIMFA 593 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 +F V+ + I D +G + + DL + + + +D + + Sbjct: 594 FFMVIIAAFIGTQD-------LGQELQRTLAGTDLGKNFVLGICVSLMALTFDLTILK 644 Score = 65.7 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 81/265 (30%), Gaps = 15/265 (5%) Query: 312 NVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGI----AWQSIGYI 367 G+++ L +R + I W + +A+ W+ + Sbjct: 70 LFALTRWLTGLLQTVLDTTANLLFGKRRWPNLGPIPWTAIAASMAVLGYYLGGWKMAALV 129 Query: 368 VNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 F + ++ + TM +VV A II + +G+ P + ++P +L Sbjct: 130 AVTFCWTALVGQWKIAMQTMSVLVVAAPTAFIIGLSLGVAAWKSPAFNRALKPVLSVLQT 189 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P FF ++ V ++ + P I+ ++ G + E Sbjct: 190 LP---FFTYLLPAVIFFKVGPTAGAVATTIY-AIPPMILMTTLGLQKVSPEVVEAGHMSG 245 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 T + R++ LP + G +++ GLGA + Sbjct: 246 CTKLQLLRHVYLPSARTEILVGVNQVIMLCLAMVVLTAFIGM-------PGLGAKLLAMM 298 Query: 548 EKGSFPEVVLGVLIMCCFVLALNRF 572 + + + L+R Sbjct: 299 GSFKLGRSFEIGVTIVLLAVTLDRM 323 >gi|307314433|ref|ZP_07594038.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|306906001|gb|EFN36522.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|315061959|gb|ADT76286.1| glycine betaine transporter subunit [Escherichia coli W] gi|323377460|gb|ADX49728.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli KO11] Length = 354 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGMATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 87.7 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGMATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|266622873|ref|ZP_06115808.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium hathewayi DSM 13479] gi|288865368|gb|EFC97666.1| putative aliphatic sulfonates transport permease protein SsuC [Clostridium hathewayi DSM 13479] Length = 262 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 14/203 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +LP + + L + +LF L A + + + P+ D+++ +P L ++ Sbjct: 60 DGATLPTHLMGSLKVALFGYSLGVLFGVPMGILMAWFKWVDRFVRPLFDLIRPVPGLAWI 119 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 ++ F L IF S + Y + ++ V F S Sbjct: 120 PMFILLFGIGI--------LPKAAVIFLSTSVACIVNSYTGIKQTKQEHLWVGDVFGFSN 171 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 QK + + +P ++P + + ++M W +VA+E++ G+G I Sbjct: 172 LQKLYKIAIPTALPMIFTGLRVAMGAAWMALVAAELLASSV------GLGYMIQQGRYAS 225 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 + M+ + V L+D +L Sbjct: 226 KPALVFVGMIMIGIVGLLFDTIL 248 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ + + + +P+GI + + + ++P L+ P + P+ + Sbjct: 71 SLKVALFGYSLGVLFGVPMGILMAWFKWVDRFVRPLFDLIRPVPGLAWIPMFILLFGIG- 129 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L + ++ T + N G + V F + + I +P P Sbjct: 130 ---ILPKAAVIFLSTSVACIVNSYTGIKQTKQEHLWVGDVFGFSNLQKLYKIAIPTALPM 186 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 TG A G AW A + +E+ + + GLG I + V +G++++ Sbjct: 187 IFTGLRVAMGAAWMALVAAELLA------SSVGLGYMIQQGRYASKPALVFVGMIMIGIV 240 Query: 566 VLALNRFL 573 L + L Sbjct: 241 GLLFDTIL 248 >gi|119386564|ref|YP_917619.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] gi|119377159|gb|ABL71923.1| binding-protein-dependent transport systems inner membrane component [Paracoccus denitrificans PD1222] Length = 293 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 18/236 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +A + V+ L+ + + + +V + + RT + +I+++ Sbjct: 59 WIAVLAVLAAGIWLVSRSWKIALGSVLALLVVGYF---GMWEDTMRTIAMVAVCTLIAVV 115 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 L A+S R+ ++ PILD+MQ++P +L V+ F GKV G I+A Sbjct: 116 LGIPVGILMAQSNRMNAMVTPILDMMQTMPSFVYLIPVVMIFGL---GKVPGLIAVVIYA 172 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + D+ E + +F S WQK + +P ++P ++ + ++ Sbjct: 173 IP-----PVIRLTNLGIRQVAPDVLEAAEAFGSSSWQKLRDVQLPLALPTIMAGINQTIM 227 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + AI +Q + L ++ + + D+ Sbjct: 228 MSLAMVVVASMIGV-------RGLGQPVLQAINQQYFTMGVMNGLAIVAIAIIMDR 276 Score = 76.9 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 S + + + +W+ V + T+ V V +IA + Sbjct: 56 RSPWIAVLAVLAAGIWLVSRSWKIALGSVLALLVVGYFGMWEDTMRTIAMVAVCTLIAVV 115 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVGI + +++ + P ++ P+ V+ VV + + ++ Sbjct: 116 LGIPVGILMAQSNRMNAMVTPILDMMQTMPSFVYLIPVVMIFGLG----KVPGLIAVVIY 171 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G D E A +F + W+ R + LP P + G + Sbjct: 172 AIPPVIRLTNLGIRQVAPDVLEAAEAFGSSSWQKLRDVQLPLALPTIMAGINQTIMMSLA 231 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +V+ + GLG + ++ + F V+ L + + ++R Sbjct: 232 MVVVASMIG-------VRGLGQPVLQAINQQYFTMGVMNGLAIVAIAIIMDR 276 >gi|116671661|ref|YP_832594.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter sp. FB24] gi|116611770|gb|ABK04494.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter sp. FB24] Length = 321 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 91/221 (41%), Gaps = 10/221 (4%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P D++ SL + + R + +IS++ L A+ L P Sbjct: 95 PGPLDVLGQFGTLWADGSLQEAVWTSLQRGIVGFLISVVIATPIGLLLAQVAPLRRAFGP 154 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 ++ +Q +P + ++ +++F + F +F + ++ + + IP Sbjct: 155 LISGLQVLPSVAWVPAAIIWFGL--------TDATVYFVVFMGAIPSIINGLISGVDQIP 206 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 V + Q + +P ++PG + + + W ++A+E+I VG T+ Sbjct: 207 PQYRSVGTVLGANRLQMALQIVLPAALPGYLSGLKQGWAFSWRSLMAAEIIAVGGTIG-- 264 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 G+GS + D+ ++ A+L +L V L + L+F P+ Sbjct: 265 FGLGSMLNQGRDLADMTIVMSAILLILAVGILIELLVFAPI 305 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 76/192 (39%), Gaps = 6/192 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R +V +I+ +I P+G+ + + P L P+ + P + Sbjct: 120 SLQRGIVGFLISVVIATPIGLLLAQVAPLRRAFGPLISGLQVLPSVAWVPAAIIWFGLTD 179 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ G I+ +I+G P ++ V + + I+LP P Sbjct: 180 AT----VYFVVFMGAIPSIINGLISGVDQIPPQYRSVGTVLGANRLQMALQIVLPAALPG 235 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 Y++G +W + + +E+ + G GLG+ + + + V+ +L++ Sbjct: 236 YLSGLKQGWAFSWRSLMAAEIIAVGGTI--GFGLGSMLNQGRDLADMTIVMSAILLILAV 293 Query: 566 VLALNRFLWHPL 577 + + ++ P+ Sbjct: 294 GILIELLVFAPI 305 >gi|229488500|ref|ZP_04382366.1| taurine transport system permease protein TauC [Rhodococcus erythropolis SK121] gi|229324004|gb|EEN89759.1| taurine transport system permease protein TauC [Rhodococcus erythropolis SK121] Length = 290 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 13/218 (5%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + FT + + ++ R + +A I IP+GI I + +S + P +L Sbjct: 79 VVSAFFTLAENGQLQEHVSASLTRALTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELF 138 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 A P+ V + + L+I+ + IL N I+G + A+S Sbjct: 139 RNTAALALLPVFVLILGIGEESK----IALVIYACTFPILLNTISGVRTVDPLLIKSAAS 194 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + R ++ ++LP P TG A + I +E+ GLG I Sbjct: 195 LGFSSIRLFQKVVLPAAVPTIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITA 248 Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 S P + G++ + L +N + L + Sbjct: 249 SQLNFQIPNMYAGIVAISLLGLTINAILVLIERRLSRW 286 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 91/257 (35%), Gaps = 18/257 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRM 72 RI + F+ + L + P V TL + L ++ S + R Sbjct: 44 RIAKPSIAIAIFLGIWEAAPRLGLVDKVFLPPFTEVVSAFFTLAENGQLQEHVSASLTRA 103 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+ +++ A R + L PIL++ ++ L L V+ Sbjct: 104 LTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFVLILGIG------ 157 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 E + I + + + + + + + L + + S S + F + +P ++P + Sbjct: 158 --EESKIALVIYACTFPILLNTISGVRTVDPLLIKSAASLGFSSIRLFQKVVLPAAVPTI 215 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + M+ + ++A+EM+ G+G I + + + ++ + + Sbjct: 216 FTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQLNFQIPNMYAGIVAISLLG 269 Query: 253 FLYD---QLLFRPMIVW 266 + L+ R + W Sbjct: 270 LTINAILVLIERRLSRW 286 >gi|167577393|ref|ZP_02370267.1| taurine ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 283 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 89/255 (34%), Gaps = 13/255 (5%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L S + L + V + G +V D + ++ Sbjct: 36 AAALATWSALVAGWWLAARFEWVSAALLPGPEAVLRKLVVLSTEGFDDATLGQHLLASLA 95 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+ +A + IP G+ I + + P + P + PL+V + Sbjct: 96 RIATAFALALVTAIPAGVLIATNRIVRGAVDPIIEFYRPIPPLAYLPLMVVWFGIGDASK 155 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L + L M + AGAS A+S T + R+++LP P +T Sbjct: 156 VLLIYLTMFA----PLAIATAAGASGVSESRLRAAASLGATRLKLLRHVVLPSALPDILT 211 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G A G W+ + +E+ + T GLG + ++ V+ G+L++ +A Sbjct: 212 GVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGAIAIA 265 Query: 569 LN---RFLWHPLYLY 580 L R L L + Sbjct: 266 LEIGLRALQRRLTPW 280 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L Q+ + R+ +A ++L+ L A +R + + PI++ + IP L Sbjct: 80 GFDDATLGQHLLASLARIATAFALALVTAIPAGVLIATNRIVRGAVDPIIEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F KV+ I+ + + + + + S Sbjct: 140 YLPLMVVWFGIGDASKVL--------LIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + + ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRLKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIAIALEIGLRALQRRLTPW 280 >gi|110668537|ref|YP_658348.1| sulfonate ABC transporter permease [Haloquadratum walsbyi DSM 16790] gi|109626284|emb|CAJ52742.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Sulfonate ABC transporter permease protein [Haloquadratum walsbyi DSM 16790] Length = 301 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 72/191 (37%), Gaps = 12/191 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ + +++ S + + +G+ +G+ + + + P + L P + + + H Sbjct: 112 SLLHYLPGLVVGSTLGVSLGLAMGWSGRLDNALTPVTRFLRPIPPLAWIVFAIVWIGIGH 171 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI-TGWRWWRYIILPGIFP 504 + ++ G W +N AG KEVA+S + R +I+P P Sbjct: 172 GG----AAFIVGIGAFWINFYNAYAGVEGVSTHLKEVAASLGVDDDLTMIRKVIIPAAMP 227 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG T+ G W + +E+ G+G I + + + V ++++ Sbjct: 228 SITTGLRTSIGQCWMIVVAAELFG-------APGVGFQIINAAQNLATDVSVAYMVVISL 280 Query: 565 FVLALNRFLWH 575 L + Sbjct: 281 VFLVSDGVFRR 291 Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 92/262 (35%), Gaps = 34/262 (12%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS---------------LPQYASRT 68 FV + + + P ++ I L + L +++ Sbjct: 53 IFVTIWQVAAAAVDQTYLLPSPIEVATAFIIELTASATFTLPIAGITVPMTRLTANLAQS 112 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 L L +V+ S RL L P+ ++ IP L ++ F +V+ + Sbjct: 113 LLHYLPGLVVGSTLGVSLGLAMGWSGRLDNALTPVTRFLRPIPPLAWIVFAIVWIGIGHG 172 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL-SGWQKFWYLGVPF 187 G A F + W ++ Y + + L+EV+ S + + +P Sbjct: 173 G--------AAFIVGIGAFWINFYNAYAGVEGVSTHLKEVAASLGVDDDLTMIRKVIIPA 224 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +MP + + S+ W VVA+E+ PG+G I A + + M+ Sbjct: 225 AMPSITTGLRTSIGQCWMIVVAAELF-------GAPGVGFQIINAAQNLATDVSVAYMVV 277 Query: 248 MLGVIFLYD---QLLFRPMIVW 266 + V + D + + R ++ W Sbjct: 278 ISLVFLVSDGVFRRVERRLLEW 299 >gi|194433050|ref|ZP_03065333.1| glycine betaine/L-proline ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194418777|gb|EDX34863.1| glycine betaine/L-proline ABC transporter, permease protein [Shigella dysenteriae 1012] gi|332087399|gb|EGI92527.1| glycine betaine/L-proline transport system permease protein proW [Shigella boydii 5216-82] gi|332088693|gb|EGI93806.1| glycine betaine/L-proline transport system permease protein proW [Shigella dysenteriae 155-74] Length = 354 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 IIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 II +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IIIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|307321321|ref|ZP_07600721.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] gi|306893049|gb|EFN23835.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti AK83] Length = 281 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 91/265 (34%), Gaps = 25/265 (9%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------- 383 +L+ S++ + + + +L +W G Sbjct: 24 YLRRSGAAAGSWLSRYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALL 83 Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 I++ R + A ++ IP+G+ +G I + + P QL A +P+ + Sbjct: 84 DDIAISLQRSGTAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILL 143 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + ++ + T + +L + I+G + E+A + + +R ++LP Sbjct: 144 LGLGEASK----VFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLP 199 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P G + A I SE+ G+G + + P + + Sbjct: 200 GAVPSIFVGLRLSATTALLLLIASEMIG------ANKGIGFQVMNAQYNFQIPLMFAAIF 253 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCL 585 I+ L N L ++ R L Sbjct: 254 ILAGLGLVSNYAL-----VFAQRRL 273 Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 96/258 (37%), Gaps = 19/258 (7%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRML 73 + + + LL L + I P I+ + + +L + + R Sbjct: 35 WLSRYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALLDDIAISLQRSG 94 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A V +++ L + R + L P+L + + L ++ Sbjct: 95 TAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLG------- 147 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E + +F IF + ++ + S + + L E++R + S F + +P ++P + Sbjct: 148 -EASKVFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIF 206 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + +S + ++ASEMI GIG + A + + A+ + G+ Sbjct: 207 VGLRLSATTALLLLIASEMIGANK------GIGFQVMNAQYNFQIPLMFAAIFILAGLGL 260 Query: 254 LYDQLLF---RPMIVWSN 268 + + L R + WS+ Sbjct: 261 VSNYALVFAQRRLCRWSD 278 >gi|126464362|ref|YP_001045475.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] gi|126106173|gb|ABN78703.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17029] Length = 377 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 77/201 (38%), Gaps = 9/201 (4%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D + ++ R ++ +A + +P+G +G + P L+ PA + Sbjct: 164 GDRAVLFGHIGASLKRALLAFALAVAVGVPLGFLLGLSREAQLWMSPILSLMLPLPAVAW 223 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 P+++ L + ++ G + +L++ + G A V S + Sbjct: 224 TPILLVVFGPGDLT----IVIVCFLGAVFPVLYSTMQGVRACGTQPVWVVRSMGGSRLDV 279 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R +++P P +TG +W + +E+ + T+GLG I + Sbjct: 280 LRRVLIPASLPALITGFKLCMAHSWRTLVAAEMLA-----ALTSGLGYMIFSARSYMDVS 334 Query: 554 EVVLGVLIMCCFVLALNRFLW 574 + +GV+ + +A+ L+ Sbjct: 335 TMFVGVVCLAAIGMAIEHLLF 355 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 13/204 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D L + + R L A +++ L SR + + PIL +M +P + + Sbjct: 165 DRAVLFGHIGASLKRALLAFALAVAVGVPLGFLLGLSREAQLWMSPILSLMLPLPAVAWT 224 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 +V F +L + F V+ + +S Q + V RS S Sbjct: 225 PILLVVFGPG--------DLTIVIVCFLGAVFPVLYSTMQGVRACGTQPVWVVRSMGGSR 276 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 + +P S+P L+ + M+ W +VA+EM+ + G+G I A Sbjct: 277 LDVLRRVLIPASLPALITGFKLCMAHSWRTLVAAEMLAALTS-----GLGYMIFSARSYM 331 Query: 237 DLLAILYAMLTMLGVIFLYDQLLF 260 D+ + ++ + + + LLF Sbjct: 332 DVSTMFVGVVCLAAIGMAIEHLLF 355 >gi|319761857|ref|YP_004125794.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gi|330826291|ref|YP_004389594.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gi|317116418|gb|ADU98906.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gi|329311663|gb|AEB86078.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 370 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 96/233 (41%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++ +I++L + + + + + P A T +L++++ ++ Sbjct: 123 PVMLLLISLLAWQFAGRMLALATAVSLGVVVLLGIWPD-AMVTLALVLTSLLFCVVLGLP 181 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 + A S R P+LD MQ+ P +L V+ F G V G + +FA Sbjct: 182 LGIVLAASDRAQRFTRPLLDAMQTTPAFVYLVPVVMLFG---IGNVPGVIVTIVFA---- 234 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + L + DL E SR++ S WQ W + +P ++P ++ + ++ Sbjct: 235 -LPPLVRLTNLGLRQVRPDLIEASRAYGASPWQLLWKVQLPLALPSIMAGINQALMLSLS 293 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + + D++ Sbjct: 294 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIGGLGIVLLAVVLDRI 339 Score = 87.3 bits (215), Expect = 7e-15, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 90/254 (35%), Gaps = 16/254 (6%) Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383 F + V+ L + V+ + +AWQ G ++ T + V+ LG Sbjct: 97 PFFQSVRAPIDATLSGVTDALLALPWPVMLLLISLLAWQFAGRMLALATAVSLGVVVLLG 156 Query: 384 C-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +T+ V+ ++ ++ +P+GI + +P + PA V+ VV Sbjct: 157 IWPDAMVTLALVLTSLLFCVVLGLPLGIVLAASDRAQRFTRPLLDAMQTTPAFVYLVPVV 216 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 N+ ++ I ++ G D E + ++ + W+ + Sbjct: 217 MLFGIG----NVPGVIVTIVFALPPLVRLTNLGLRQVRPDLIEASRAYGASPWQLLWKVQ 272 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P + G A + + +++ + + G GLG + + +G Sbjct: 273 LPLALPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLASIG 325 Query: 559 VLIMCCFVLALNRF 572 L + + L+R Sbjct: 326 GLGIVLLAVVLDRI 339 >gi|221370082|ref|YP_002521178.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] gi|221163134|gb|ACM04105.1| Binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides KD131] Length = 276 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 9/188 (4%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++++R++ + +A ++ +G+ IG + +P + P + P+++ Sbjct: 78 ALSLYRLLAGVGLALVLGSLIGLAIGLTRWGRAIFKPIISAIMPIPTLAWTPILLLVFGI 137 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 N ++ + I++NV+ G VA+S + + RY+I+PGI Sbjct: 138 ----DNRTTITVVFIAASFEIIYNVVTGIEMMTRKTYWVAASMGASRIQTLRYVIIPGIL 193 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 PY +TG G AW A I +E+ + + GLG I ++ E + G+L + Sbjct: 194 PYLITGLKLGVGYAWRALIAAEMLA-----ASSHGLGFMIYDAQEYMDMKSIYGGILTIS 248 Query: 564 CFVLALNR 571 L + R Sbjct: 249 VLGLLIER 256 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 91/239 (38%), Gaps = 13/239 (5%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVI 78 +F L G I+ L + V P + + + R+L+ + + Sbjct: 31 LFGLWEIAARTGTISAFLFPPPTAILASLWVSAGPNGDPPYGTLLDIALSLYRLLAGVGL 90 Query: 79 SLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 +L+ + +R + PI+ + IP L + ++ F Sbjct: 91 ALVLGSLIGLAIGLTRWGRAIFKPIISAIMPIPTLAWTPILLLVFGIDNR--------TT 142 Query: 139 IFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMM 198 I +F + + + +++ + + R V+ S S Q Y+ +P +P L+ + + Sbjct: 143 ITVVFIAASFEIIYNVVTGIEMMTRKTYWVAASMGASRIQTLRYVIIPGILPYLITGLKL 202 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 + W ++A+EM+ G+G I A + D+ +I +LT+ + L ++ Sbjct: 203 GVGYAWRALIAAEMLAASSH-----GLGFMIYDAQEYMDMKSIYGGILTISVLGLLIER 256 >gi|33594811|ref|NP_882454.1| ABC transport system permease protein [Bordetella parapertussis 12822] gi|33599083|ref|NP_886643.1| ABC transport system permease protein [Bordetella bronchiseptica RB50] gi|33564887|emb|CAE39832.1| ABC transport system permease protein [Bordetella parapertussis] gi|33575129|emb|CAE30592.1| ABC transport system permease protein [Bordetella bronchiseptica RB50] Length = 256 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 71/200 (35%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + ++ + RV+V A+ + IP+GI++G + P L P+ + Sbjct: 55 WEQGSLLDHIVASARRVMVGFAAATALAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSW 114 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + ++ GT L VI A + +G + Sbjct: 115 IPLSLLWFGITETQKYS----IVFMGTFAPALLYVIEATRNIDPLLIRAARNLGASGPQV 170 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R +ILP P +G G +W I +E+ + GLG I E Sbjct: 171 MRSVILPASLPQIFSGFKVILGLSWTCVISAELVA------AKEGLGFLIMNGKEFFQTD 224 Query: 554 EVVLGVLIMCCFVLALNRFL 573 VVLG+ ++ VL + Sbjct: 225 TVVLGMALISVTVLVTDVVF 244 Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 88/249 (35%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 ++ + + + P D+ + + SL + + R++ + Sbjct: 21 IVLLLFWEAVCRLQWVDALFLPPPSDVFARMGNMWEQGSLLDHIVASARRVMVGFAAATA 80 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S+R PIL ++ +P + ++ ++++F K Sbjct: 81 LAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSWIPLSLLWFGITETQKYS--------I 132 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 +F + ++ NI L +R+ SG Q + +P S+P + + + Sbjct: 133 VFMGTFAPALLYVIEATRNIDPLLIRAARNLGASGPQVMRSVILPASLPQIFSGFKVILG 192 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W V+++E++ + G+G I + ++ M + + + D ++ Sbjct: 193 LSWTCVISAELVAAKE------GLGFLIMNGKEFFQTDTVVLGMALISVTVLVTDVVFRI 246 Query: 259 LFRPMIVWS 267 + ++ WS Sbjct: 247 IENRVLAWS 255 >gi|117621146|ref|YP_857442.1| taurine transporter subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562553|gb|ABK39501.1| taurine uptake ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 276 Score = 120 bits (301), Expect = 8e-25, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 94/277 (33%), Gaps = 15/277 (5%) Query: 309 LSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIV 368 LS + R L ++ + ++ + + Q + Sbjct: 5 LSRPLDPARRIRLRWPLPRRLGVSLLTLGALLALWWLVARLGLISPLFLPPPAQVLQQFA 64 Query: 369 NHFTYQDVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 Q + ++ R+++ + A++ + VG+ +G P + + P +L Sbjct: 65 TLAGPQGFMDATLWQHLAASLQRILIALAAATLCGVTVGLAMGLSPTLRGMLDPLIELYR 124 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P + PL+V + LL+ + +AG A + Sbjct: 125 PVPPLAYLPLMVIWFGIGETSK----VLLIYLAIFAPVAMATLAGVQGAKQVRLRAARAL 180 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 W+ Y+I+PG P +TG G W+ + +E+ + T G+G + + Sbjct: 181 GANRWQVLWYVIVPGALPDMLTGLRIGLGVGWSTLVAAELIA------ATRGVGFMVQAA 234 Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 E + V+ G+L++ L R L L + Sbjct: 235 GEFLATDVVLAGILVIALIAFTLELGLRALQRRLTPW 271 Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 17/218 (7%) Query: 53 PITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPI 112 P +L Q+ + + R+L A+ + L S L +L P++++ + +P Sbjct: 69 PQGFMDATLWQHLAASLQRILIALAAATLCGVTVGLAMGLSPTLRGMLDPLIELYRPVPP 128 Query: 113 LGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSF 172 L +L V++F KV+ LA + + T + Q + +R+ Sbjct: 129 LAYLPLMVIWFGIGETSKVLLIYLAIFAPVAMA-----TLAGVQGAKQVR---LRAARAL 180 Query: 173 RLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALA 232 + WQ WY+ VP ++P ++ + + + GW +VA+E+I G+G + A Sbjct: 181 GANRWQVLWYVIVPGALPDMLTGLRIGLGVGWSTLVAAELIA------ATRGVGFMVQAA 234 Query: 233 IKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWS 267 + +L +L + + F + + L R + W Sbjct: 235 GEFLATDVVLAGILVIALIAFTLELGLRALQRRLTPWH 272 >gi|16130592|ref|NP_417164.1| glycine betaine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89109471|ref|AP_003251.1| glycine betaine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|157162129|ref|YP_001459447.1| glycine betaine transporter membrane protein [Escherichia coli HS] gi|170019070|ref|YP_001724024.1| glycine betaine transporter membrane protein [Escherichia coli ATCC 8739] gi|170082263|ref|YP_001731583.1| glycine betaine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188496143|ref|ZP_03003413.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 53638] gi|194439438|ref|ZP_03071514.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 101-1] gi|238901822|ref|YP_002927618.1| glycine betaine transporter subunit [Escherichia coli BW2952] gi|253772461|ref|YP_003035292.1| glycine betaine transporter membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037720|ref|ZP_04871778.1| glycine betaine/L-proline ABC transporter [Escherichia sp. 1_1_43] gi|254162615|ref|YP_003045723.1| glycine betaine transporter membrane protein [Escherichia coli B str. REL606] gi|256024810|ref|ZP_05438675.1| glycine betaine transporter membrane protein [Escherichia sp. 4_1_40B] gi|293415929|ref|ZP_06658569.1| glycine betaine transporter membrane protein [Escherichia coli B185] gi|297517416|ref|ZP_06935802.1| glycine betaine transporter membrane protein [Escherichia coli OP50] gi|300930531|ref|ZP_07145927.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300949074|ref|ZP_07163121.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300957449|ref|ZP_07169662.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|301026688|ref|ZP_07190099.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301645343|ref|ZP_07245290.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|307139370|ref|ZP_07498726.1| glycine betaine transporter membrane protein [Escherichia coli H736] gi|312973111|ref|ZP_07787284.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 1827-70] gi|331643366|ref|ZP_08344497.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H736] gi|130992|sp|P14176|PROW_ECOLI RecName: Full=Glycine betaine/L-proline transport system permease protein proW gi|147374|gb|AAA24428.1| proW peptide [Escherichia coli] gi|1789033|gb|AAC75725.1| glycine betaine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|1800066|dbj|BAA16543.1| glycine betaine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|157067809|gb|ABV07064.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli HS] gi|169753998|gb|ACA76697.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli ATCC 8739] gi|169890098|gb|ACB03805.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188491342|gb|EDU66445.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 53638] gi|194421614|gb|EDX37625.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 101-1] gi|226839344|gb|EEH71365.1| glycine betaine/L-proline ABC transporter [Escherichia sp. 1_1_43] gi|238861367|gb|ACR63365.1| glycine betaine transporter subunit [Escherichia coli BW2952] gi|242378240|emb|CAQ33015.1| proW, subunit of proline ABC transporter [Escherichia coli BL21(DE3)] gi|253323505|gb|ACT28107.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974516|gb|ACT40187.1| glycine betaine transporter subunit [Escherichia coli B str. REL606] gi|253978683|gb|ACT44353.1| glycine betaine transporter subunit [Escherichia coli BL21(DE3)] gi|260448264|gb|ACX38686.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli DH1] gi|291432118|gb|EFF05100.1| glycine betaine transporter membrane protein [Escherichia coli B185] gi|299879610|gb|EFI87821.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300315805|gb|EFJ65589.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300451460|gb|EFK15080.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300461587|gb|EFK25080.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|301076377|gb|EFK91183.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|309703043|emb|CBJ02375.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310333053|gb|EFQ00267.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 1827-70] gi|315137291|dbj|BAJ44450.1| glycine betaine transporter membrane protein [Escherichia coli DH1] gi|315615065|gb|EFU95702.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 3431] gi|323935628|gb|EGB31945.1| inner membrane transport system [Escherichia coli E1520] gi|323941486|gb|EGB37669.1| inner membrane transport system [Escherichia coli E482] gi|323960576|gb|EGB56203.1| inner membrane transport system [Escherichia coli H489] gi|323971477|gb|EGB66712.1| inner membrane transport system [Escherichia coli TA007] gi|331036837|gb|EGI09061.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H736] gi|332344560|gb|AEE57894.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli UMNK88] Length = 354 Score = 120 bits (301), Expect = 8e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.9 bits (214), Expect = 9e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|260769404|ref|ZP_05878337.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio furnissii CIP 102972] gi|260614742|gb|EEX39928.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio furnissii CIP 102972] Length = 368 Score = 120 bits (301), Expect = 8e-25, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 19/235 (8%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +L++ +I L G + + ++ + A T +++++ LL Sbjct: 109 IMLLILFLIAWQLAGSRMGIASFLSLMVIGLIGAWDQ----AMVTLALVMTSVFFCLLIG 164 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 A+S ++ PILD MQ+ P +L V+ F G V G + IFA Sbjct: 165 MPLGIWLARSDTAAKIVRPILDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA-- 219 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P +L E +F S Q + + +P +MP ++ + ++ Sbjct: 220 ---LPPIVRLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLS 276 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + L D++ Sbjct: 277 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 324 Score = 86.1 bits (212), Expect = 2e-14, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 85/227 (37%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 ++ + IAWQ G + ++ ++ + +G +T+ V+ + +I +P+G Sbjct: 109 IMLLILFLIAWQLAGSRMGIASFLSLMVIGLIGAWDQAMVTLALVMTSVFFCLLIGMPLG 168 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+ + ++P + PA V+ +V N+ ++ I I+ Sbjct: 169 IWLARSDTAAKIVRPILDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIV 224 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 I G P + E +F + + I LP P + G + + +++ Sbjct: 225 RLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLSMVVIAS 284 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G L + + L+R Sbjct: 285 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 324 >gi|300922748|ref|ZP_07138837.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300420933|gb|EFK04244.1| ABC transporter, permease protein [Escherichia coli MS 182-1] Length = 354 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.9 bits (214), Expect = 9e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|74313249|ref|YP_311668.1| glycine betaine transporter membrane protein [Shigella sonnei Ss046] gi|73856726|gb|AAZ89433.1| high-affinity transport system for glycine betaine and proline [Shigella sonnei Ss046] gi|323167147|gb|EFZ52865.1| glycine betaine/L-proline transport system permease protein proW [Shigella sonnei 53G] Length = 354 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.9 bits (214), Expect = 9e-15, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 98/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + + P Sbjct: 63 PLDSWV------TEGIDWVVTHFRPVFQGVRVPVDYILNSFQQLLLGMPAPV-------- 108 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + + V+ ++ + Sbjct: 109 ---AIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCIV 161 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 162 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G + P D E + SF + + + LP P + G A + Sbjct: 218 ALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|311107092|ref|YP_003979945.1| binding-protein-dependent transporter inner membrane component family protein 47 [Achromobacter xylosoxidans A8] gi|310761781|gb|ADP17230.1| binding-protein-dependent transport system inner membrane component family protein 47 [Achromobacter xylosoxidans A8] Length = 283 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 14/203 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 L + + R+L R L ++P + + IP+L +L Sbjct: 70 SSGDLWLHVQASMQRVLVGFAAGSALGLALGAAMGLWRPLEAYILPTFNALVQIPVLAWL 129 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 F ++ P K I I + + +T + Q P +L EV+R + + Sbjct: 130 PFVLLLVGIGEPLKYI--------LIAKAALVPVTLNTLQGFRQTPSNLLEVARVYGYTR 181 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 Q+ + +P ++P L + + + W +V E++ + G+G I + Sbjct: 182 RQQVLEVVLPHALPTLFTGLRLGFTKAWLSLVVVELVASSE------GLGYLIVYGRQLF 235 Query: 237 DLLAILYAMLTMLGVIFLYDQLL 259 L ++ A+L + + + D+LL Sbjct: 236 QLDLVMAAVLVVGAIGYAIDKLL 258 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 10/189 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 +M RV+V S + + +G +G + + I P L P + P V+ V Sbjct: 80 ASMQRVLVGFAAGSALGLALGAAMGLWRPLEAYILPTFNALVQIPVLAWLPFVLLLVGIG 139 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 +L+ + N + G P++ EVA + T + ++LP P Sbjct: 140 ----EPLKYILIAKAALVPVTLNTLQGFRQTPSNLLEVARVYGYTRRQQVLEVVLPHALP 195 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG AW + +V E+ + + GLG I + V+ VL++ Sbjct: 196 TLFTGLRLGFTKAWLSLVVVELVA------SSEGLGYLIVYGRQLFQLDLVMAAVLVVGA 249 Query: 565 FVLALNRFL 573 A+++ L Sbjct: 250 IGYAIDKLL 258 >gi|13471315|ref|NP_102884.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099] gi|14022060|dbj|BAB48670.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099] Length = 259 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 23/237 (9%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------------CITMFRVVVL 393 AW ++G VN D L ++ G IT++RV Sbjct: 17 LGISFFVLFIAFWAWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDILITIWRVFGG 76 Query: 394 IIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLS 453 ++AS++ +P+GI +G + + ++PF PA+ F PL++ L Sbjct: 77 FVLASVVAVPIGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELEK----L 132 Query: 454 LLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITA 513 L++ G+ + I+ V + D E A + T + +I+P P Sbjct: 133 LVIFVGSVFQIILIVAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPANAPEIAETLRLV 192 Query: 514 CGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 G AW IV+E+ ++G+G I S + + +++ G++++ L + Sbjct: 193 LGWAWTYVIVAELIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIGLLSD 243 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 15/199 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ V++ + + + L P + + +P F+ +++ Sbjct: 69 TIWRVFGGFVLASVVAVPIGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG- 127 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 EL + IF V+ + + + + RDL E + + + + +P Sbjct: 128 -------ELEKLLVIFVGSVFQIILIVAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPA 180 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + P + + + + W +V+ +E+I GIG I + I++ ++ Sbjct: 181 NAPEIAETLRLVLGWAWTYVIVAELIGSSS------GIGYMIINSQSRLATGQIIFGIIV 234 Query: 248 MLGVIFLYDQLLFRPMIVW 266 + + L D F+ W Sbjct: 235 IGLIGLLSD-FAFKAFNRW 252 >gi|251789284|ref|YP_003004005.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] gi|247537905|gb|ACT06526.1| binding-protein-dependent transport systems inner membrane component [Dickeya zeae Ech1591] Length = 263 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 18/253 (7%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDV-HSLPQYASRTTLRMLSAMVISLLFTF 84 V V + + + + L L Q+ S +T R L+ I Sbjct: 22 VAVWQLASSAGWLSSRILPSPQAITVTFWRLTRSGELWQHLSISTWRALTGFAIGGALGL 81 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + SR +L + +++++P L + +++F E A IF + Sbjct: 82 ALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGID--------ESAKIFLVAL 133 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 ++ + + Y + NI L E++RS+ LSG++ F + +P ++P ++ + S+ W Sbjct: 134 GTLFPIYLNTYHGIRNIDGGLLEMARSYGLSGFRLFREVVLPGALPSIMVGVRFSLGLMW 193 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFR 261 ++ +E I GIG A + ++ A++ + L D + L R Sbjct: 194 LTLIVAETISASS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVIALTLER 247 Query: 262 PMIVWSNKFRLER 274 + W ++L Sbjct: 248 IWLRWHPSWQLTE 260 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 10/188 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +R + I + + +G G + Q+L P PLV+ Sbjct: 64 ISTWRALTGFAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGI- 122 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ GT + I N G E+A S+ ++G+R +R ++LPG P Sbjct: 123 ---DESAKIFLVALGTLFPIYLNTYHGIRNIDGGLLEMARSYGLSGFRLFREVVLPGALP 179 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G W IV+E S ++G+G + E VV+ +++ Sbjct: 180 SIMVGVRFSLGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVVAIILYAL 233 Query: 565 FVLALNRF 572 + Sbjct: 234 LGKLADVI 241 >gi|315181935|gb|ADT88848.1| glycine betaine/L-proline transport system permease [Vibrio furnissii NCTC 11218] Length = 368 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 19/235 (8%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFT 83 +L++ +I L G + + ++ + A T +++++ LL Sbjct: 109 IMLLILFLIAWQLAGSRMGIASFLSLMVIGLIGAWDQ----AMVTLALVMTSVFFCLLIG 164 Query: 84 FVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIF 143 A+S ++ P+LD MQ+ P +L V+ F G V G + IFA Sbjct: 165 MPLGIWLARSDTAAKIVRPVLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIFA-- 219 Query: 144 TSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGG 203 + + + +P +L E +F S Q + + +P +MP ++ + ++ Sbjct: 220 ---LPPIVRLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLS 276 Query: 204 WFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ L ++ + L D++ Sbjct: 277 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 324 Score = 85.7 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 85/227 (37%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 ++ + IAWQ G + ++ ++ + +G +T+ V+ + +I +P+G Sbjct: 109 IMLLILFLIAWQLAGSRMGIASFLSLMVIGLIGAWDQAMVTLALVMTSVFFCLLIGMPLG 168 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+ + ++P + PA V+ +V N+ ++ I I+ Sbjct: 169 IWLARSDTAAKIVRPVLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPIV 224 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 I G P + E +F + + I LP P + G + + +++ Sbjct: 225 RLTILGIQQVPEELIEAGHAFGASPKQMLYRIQLPLAMPTIMAGVNQTLMLSLSMVVIAS 284 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G L + + L+R Sbjct: 285 MIAVG-------GLGQMVLRGIGRLDMGLAAVGGLGIVILAILLDRI 324 >gi|226308141|ref|YP_002768101.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226187258|dbj|BAH35362.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 281 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 13/218 (5%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 + FT + + ++ R + +A I IP+GI I + +S + P +L Sbjct: 70 VVSAFFTLAENGQLQEHVSASLTRALTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELF 129 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 A P+ V + + L+I+ + IL N I+G + A+S Sbjct: 130 RNTAALALLPVFVLILGIGEESK----IALVIYACTFPILLNTISGVRTVDPLLIKSAAS 185 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + R ++ ++LP P TG A + I +E+ GLG I Sbjct: 186 LGFSSIRLFQKVVLPAAVPTIFTGIRMAAASSILVLIAAEMVG------AKAGLGYLITA 239 Query: 546 STEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 S P + G++ + L +N + L + Sbjct: 240 SQLNFQIPNMYAGIVAISLLGLTINAILVLIERRLSRW 277 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 91/257 (35%), Gaps = 18/257 (7%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRM 72 RI + F+ + L + P V TL + L ++ S + R Sbjct: 35 RIAKPSIAIAIFLGIWEAAPRLGLVDKVFLPPFTEVVSAFFTLAENGQLQEHVSASLTRA 94 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L+ +++ A R + L PIL++ ++ L L V+ Sbjct: 95 LTGFFVAIAIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFVLILGIG------ 148 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 E + I + + + + + + + L + + S S + F + +P ++P + Sbjct: 149 --EESKIALVIYACTFPILLNTISGVRTVDPLLIKSAASLGFSSIRLFQKVVLPAAVPTI 206 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + M+ + ++A+EM+ G+G I + + + ++ + + Sbjct: 207 FTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQLNFQIPNMYAGIVAISLLG 260 Query: 253 FLYD---QLLFRPMIVW 266 + L+ R + W Sbjct: 261 LTINAILVLIERRLSRW 277 >gi|154247387|ref|YP_001418345.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154161472|gb|ABS68688.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 283 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 94/271 (34%), Gaps = 19/271 (7%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 S+ ++ G + P L +R + + I F ++ A + I + Sbjct: 5 SDTIEAAAVEAGTVDRPAPRFAGGLFGARRPNLIGFILPFAILVLWQTAAANRWIDPVFL 64 Query: 370 HFTYQDVL---------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 V ++ ++ V + S+ I +GI G + P Sbjct: 65 PAPITVVTAFWKMLTKQHLALDFLASIKIVGQAFLYGSVAAIVLGIAAGLSRKVEQFFGP 124 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 + P + PL+V + L++ + + N + G ++ Sbjct: 125 TFDTIRHIPGIAWLPLIVLWLGIGA----PAKVLVIAKSVFFPVFLNTLQGIRNVEKNYI 180 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 E+A +T W+ R +ILP P + A G AW +V+E S GLG Sbjct: 181 ELAKVLTLTRWQLVRKVILPAAMPSIMVSLRYAAGLAWALVVVAEGLSG------LEGLG 234 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 I + ++++ ++I+ A++R Sbjct: 235 FLIFRAQGLLLTDQLLVCMVIIGLVGFAIDR 265 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 21/257 (8%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQE-------TTVPRDIVDIVPITLDVHS 60 P F +L+ F+L I+ + P +V L Sbjct: 23 PRFAGGLFGARRPNLIGFILPFAILVLWQTAAANRWIDPVFLPAPITVVTAFWKMLTKQH 82 Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + + A + + V A SR++ P D ++ IP + +L V Sbjct: 83 LALDFLASIKIVGQAFLYGSVAAIVLGIAAGLSRKVEQFFGPTFDTIRHIPGIAWLPLIV 142 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++ P KV+ + F +F + Q + N+ ++ E+++ L+ WQ Sbjct: 143 LWLGIGAPAKVLVIAKSVFFPVF--------LNTLQGIRNVEKNYIELAKVLTLTRWQLV 194 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P +MP ++ ++ + W VV +E + L G+G I A Sbjct: 195 RKVILPAAMPSIMVSLRYAAGLAWALVVVAEGLSG------LEGLGFLIFRAQGLLLTDQ 248 Query: 241 ILYAMLTMLGVIFLYDQ 257 +L M+ + V F D+ Sbjct: 249 LLVCMVIIGLVGFAIDR 265 >gi|271500181|ref|YP_003333206.1| binding-protein-dependent transporter inner membrane component [Dickeya dadantii Ech586] gi|270343736|gb|ACZ76501.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech586] Length = 263 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 95/233 (40%), Gaps = 17/233 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P+ I + L Q+ S +T R L+ I V + SR +L Sbjct: 39 LPSPQAITHTFWRLIRSGELWQHLSISTWRALTGFAIGGTLGLVLGFITGLSRTGERLLD 98 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 + +++++P L + +++F E A IF + ++ + + Y + I Sbjct: 99 TSMQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRTI 150 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E++RS+ LSG++ F + +P ++P ++ + S+ W ++ +E I Sbjct: 151 DSGLLEMARSYGLSGFRLFREVVLPGALPSIMVGVRFSLGLMWLTLIVAETISASS---- 206 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271 GIG A + ++ A++ + L D + L R + W ++ Sbjct: 207 --GIGYLAMNAREFLQTDVVVVAIILYALLGKLADIIALTLERLWLRWHPSWQ 257 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 17/198 (8%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +R + I + + +G G + Q+L P PLV+ Sbjct: 64 ISTWRALTGFAIGGTLGLVLGFITGLSRTGERLLDTSMQMLRNVPHLALIPLVILWFGI- 122 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ GT + I N G + E+A S+ ++G+R +R ++LPG P Sbjct: 123 ---DESAKIFLVALGTLFPIYLNTYHGIRTIDSGLLEMARSYGLSGFRLFREVVLPGALP 179 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G W IV+E S ++G+G + E VV+ +++ Sbjct: 180 SIMVGVRFSLGLMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVVAIILYAL 233 Query: 565 FV-------LALNRFLWH 575 L L R Sbjct: 234 LGKLADIIALTLERLWLR 251 >gi|171316280|ref|ZP_02905502.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] gi|171098602|gb|EDT43401.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MEX-5] Length = 295 Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 16/239 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 L A + ++ ++ + + I V + + + L T + +A S Sbjct: 42 GLAAVPFIAMVVILVGLALWRRGIVFSIFVGLALLVIHYMGLWAQTVSTLALVTAATFFS 101 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L+ A++ R+GM+L +LD MQ++P +L V+ F + A+ Sbjct: 102 LVIGVPLGIWGARNSRIGMILRSLLDFMQTMPAFVYLIPAVILFGLG--------RVPAV 153 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 A + + + + +L E RSF + WQ W + +P ++P ++ + + Sbjct: 154 IATIVFAMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQT 213 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + VV + MI G G+G Y+ I+ D+ L ++ + + D+L Sbjct: 214 IMMALSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F + + +G+A G + + F +L + ++G T+ V + Sbjct: 42 GLAAVPFIAMVVILVGLALWRRGIVFSIFVGLALLVIHYMGLWAQTVSTLALVTAATFFS 101 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW I ++ + PA V+ V + + + Sbjct: 102 LVIGVPLGIWGARNSRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATIVF-- 159 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G + E SF T W+ I LP P + G A Sbjct: 160 --AMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMA 217 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +V+ + G GLG Y+ ++ G L + + L+R Sbjct: 218 LSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265 >gi|323173039|gb|EFZ58670.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli LT-68] Length = 354 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 ALP-----PVIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPVIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|162451650|ref|YP_001614017.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161162232|emb|CAN93537.1| ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 281 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 91/281 (32%), Gaps = 13/281 (4%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 +P + R L + R L L + ++ + W GV +A Sbjct: 9 APPRQCERPPPRWLALGRPASARVRLALGAASFLATLAAYAWLAGRDGVNTALAPTLASI 68 Query: 367 IVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 + + RV + A+++ +P+G+ G I++ I+P + L Sbjct: 69 GRATAEALGSAELWLDVRYSFLRVTAGFVAAALLAVPLGVLAGAFRSIAALIEPPTEFLR 128 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P PLV+ LL+ GT + +L P +V+ S Sbjct: 129 YVPVPALIPLVMIAAGIGEG----AKVLLVFLGTFFQLLLMTADEVRRVPAPLLQVSQSL 184 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 T ++ P P + G AW+ +V+E+ + T GLG + Sbjct: 185 GATRREIVWRVLAPAALPGIWSALRMCNGWAWSYVVVAELVA------ATEGLGFRVLRF 238 Query: 547 TEKGSFPEVVLGVLIMCCFVLALNRFLW---HPLYLYGTRC 584 P + + ++ L L+ L+ + Sbjct: 239 YRFIQTPSIYAYLAVLGAIGLGLDWAFGAAHRRLFRWARGR 279 Score = 98.1 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 17/224 (7%) Query: 47 DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDI 106 I L L + LR+ + V + L LA R + ++ P + Sbjct: 67 SIGRATAEALGSAELWLDVRYSFLRVTAGFVAAALLAVPLGVLAGAFRSIAALIEPPTEF 126 Query: 107 MQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 ++ +P+ + ++ E A + +F + + + +P L Sbjct: 127 LRYVPVPALIPLVMIAAGIG--------EGAKVLLVFLGTFFQLLLMTADEVRRVPAPLL 178 Query: 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIG 226 +VS+S + + W + P ++PG+ + M W +VV +E++ + G+G Sbjct: 179 QVSQSLGATRREIVWRVLAPAALPGIWSALRMCNGWAWSYVVVAELVAATE------GLG 232 Query: 227 SYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVWS 267 + + +I + + + D R + W+ Sbjct: 233 FRVLRFYRFIQTPSIYAYLAVLGAIGLGLDWAFGAAHRRLFRWA 276 >gi|120404386|ref|YP_954215.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium vanbaalenii PYR-1] gi|119957204|gb|ABM14209.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium vanbaalenii PYR-1] Length = 271 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 92/268 (34%), Gaps = 27/268 (10%) Query: 323 IRFHFPENFLQLCSNQRVSYMLDIFWFCVVCG-----VAIGIAWQSIGYIVNHFTYQDVL 377 R P L ++ RV D W + +A+ ++G I L Sbjct: 2 TRPADPTAPLAQANSGRVGRRADRRWALIRLASPFILLAVWQLGSAVGLIPQDVLPAPSL 61 Query: 378 ------------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 ++ ++ RVV +I+ +I I +G +G + + P Q++ Sbjct: 62 IAEAGIELIGNGQLVDALTVSGLRVVEGLILGGVIGIALGTAVGLSKWFEATVDPPMQMV 121 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 A P PL + L LL+ G + + N + E A Sbjct: 122 RALPHLGLIPLFIIWFGIGEL----PKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQV 177 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + W+ +R II+P P + G + AW IV+E + G+G I Sbjct: 178 LGFSFWQRFRSIIVPSAAPQVLVGLRQSLAIAWLTLIVAEQINADK------GIGFLIMN 231 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + + ++ G+++ + + + Sbjct: 232 ARDFLRIDIIIFGLIVYALLGIGTDAVV 259 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 103/260 (39%), Gaps = 22/260 (8%) Query: 19 IFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-------SLPQYASRTTLR 71 + L+ ++ + G +P+D++ + + L + + LR Sbjct: 26 RWALIRLASPFILLAVWQLGSAVGLIPQDVLPAPSLIAEAGIELIGNGQLVDALTVSGLR 85 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 ++ +++ + T S+ + P + +++++P LG + +++F Sbjct: 86 VVEGLILGGVIGIALGTAVGLSKWFEATVDPPMQMVRALPHLGLIPLFIIWFGIG----- 140 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 EL + + + + + + ++ + L E ++ S WQ+F + VP + P Sbjct: 141 ---ELPKVLLVALGVSFPLYLNTFSAIRQVDPKLFETAQVLGFSFWQRFRSIIVPSAAPQ 197 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 ++ + S++ W ++ +E I GIG I A + I++ ++ + Sbjct: 198 VLVGLRQSLAIAWLTLIVAEQI------NADKGIGFLIMNARDFLRIDIIIFGLIVYALL 251 Query: 252 IFLYDQLLFRPMIVWSNKFR 271 D ++ R + + ++R Sbjct: 252 GIGTDAVV-RALERRALRYR 270 >gi|291483332|dbj|BAI84407.1| aliphatic sulfonate ABC transporter, permease [Bacillus subtilis subsp. natto BEST195] Length = 276 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 96/277 (34%), Gaps = 16/277 (5%) Query: 310 SNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVN 369 + L +T P + + I + V+ G+ I A + Sbjct: 4 AEAAGSLPKTNAEAVRKKPGRKRYGFMKGLLLPAVIIAIWQVIGGLGIVSATVLPTPVTI 63 Query: 370 HFTYQDV---LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLA 426 T++++ + I+++R + ++ + + + +GI GF + P Q+L Sbjct: 64 VLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLR 123 Query: 427 AFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSF 486 P PL + + + LL+ G + + N G EVA Sbjct: 124 TVPHLAVTPLFILWFGF----DEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVL 179 Query: 487 HITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAES 546 + +ILP P + G + G AW +V+E+ + G+G I ++ Sbjct: 180 EFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMG------SSAGVGYMIMDA 233 Query: 547 TEKGSFPEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 + +V G++I + R L L + Sbjct: 234 RQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKW 270 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 18/253 (7%) Query: 23 LAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + + +I L + P IV + L + + R ++ Sbjct: 37 AVIIAIWQVIGGLGIVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAG 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 + LA S+R + L P L +++++P L +++F K++ L A F Sbjct: 97 LGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFP 156 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 ++ + + + + L EV+R Q+ + +P ++P ++ + +S+ Sbjct: 157 VY--------INTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W +V +E++ G+G I A + + ++ V L D +L Sbjct: 209 IAWLGLVVAELMGSSA------GVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRL 262 Query: 259 LFRPMIVWSNKFR 271 L R ++ W N + Sbjct: 263 LERKLLKWRNSYE 275 >gi|152988369|ref|YP_001347068.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150963527|gb|ABR85552.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 262 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 105/267 (39%), Gaps = 17/267 (6%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 ++ R+ P L+ + + + P +++ L + Q+ + + Sbjct: 6 RLAERLAPWALPLVLLAVWQAAVAFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISG 65 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R +I V + S+ L + +++++P L + +++F Sbjct: 66 WRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--- 122 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E A IF + ++ + + Y + I L E++RS+ LSG+ F + +P ++ Sbjct: 123 -----ESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ + ++ W ++ +E I G GIG A + ++ A+L Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISAGS------GIGYLAMNAREFLQTDVVVLAILLYA 231 Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLE 273 + L D + L R + W ++++ Sbjct: 232 VLGKLADLAARGLERVWLRWHPAYQVK 258 Score = 116 bits (292), Expect = 7e-24, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 83/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390 +R++ V A+ W S + + + + I+ +R Sbjct: 9 ERLAPWALPLVLLAVWQAAVAFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRA 68 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +I I + +G G + Q++ P PLV+ Sbjct: 69 AIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DES 124 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G Sbjct: 125 AKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGV 184 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S G +G+G + E VVL +L+ + Sbjct: 185 RFALGFMWLTLIVAETISAG------SGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 238 >gi|221200703|ref|ZP_03573744.1| glycine betaine transport system permease protein opuAB [Burkholderia multivorans CGD2M] gi|221206899|ref|ZP_03579910.1| glycine betaine transport system permease protein opuAB [Burkholderia multivorans CGD2] gi|221172973|gb|EEE05409.1| glycine betaine transport system permease protein opuAB [Burkholderia multivorans CGD2] gi|221179275|gb|EEE11681.1| glycine betaine transport system permease protein opuAB [Burkholderia multivorans CGD2M] Length = 295 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 95/239 (39%), Gaps = 16/239 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 L A + ++ ++ + + + V + + L T + +A S Sbjct: 42 GLAAVPFIAMVVILVGVALWRRGIVFSVFVGLALFVIHYMGLWAQTVSTLALVTAATFFS 101 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L+ A++ R+GM+L +LD MQ++P +L V+ F + A+ Sbjct: 102 LVIGVPLGIWGARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLG--------RVPAV 153 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 A + + + + +L E RSF + WQ W + +P ++P ++ + + Sbjct: 154 IATIVFAMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQT 213 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + VV + MI G G+G Y+ I+ D+ L ++ + + D+L Sbjct: 214 IMMALSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265 Score = 81.5 bits (200), Expect = 4e-13, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F + + +G+A G + + F + + ++G T+ V + Sbjct: 42 GLAAVPFIAMVVILVGVALWRRGIVFSVFVGLALFVIHYMGLWAQTVSTLALVTAATFFS 101 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW I ++ + PA V+ V + + + Sbjct: 102 LVIGVPLGIWGARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATIVF-- 159 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G + E SF T W+ I LP P + G A Sbjct: 160 --AMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMA 217 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +V+ + G GLG Y+ ++ G L + + L+R Sbjct: 218 LSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265 >gi|254392834|ref|ZP_05008004.1| glycine betaine ABC transport system permease protein [Streptomyces clavuligerus ATCC 27064] gi|294811675|ref|ZP_06770318.1| Glycine betaine ABC transport system permease protein [Streptomyces clavuligerus ATCC 27064] gi|326440141|ref|ZP_08214875.1| putative glycine betaine ABC transporter substrate-binding and permease component [Streptomyces clavuligerus ATCC 27064] gi|197706491|gb|EDY52303.1| glycine betaine ABC transport system permease protein [Streptomyces clavuligerus ATCC 27064] gi|294324274|gb|EFG05917.1| Glycine betaine ABC transport system permease protein [Streptomyces clavuligerus ATCC 27064] Length = 598 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 96/233 (41%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI+ +L ++ + + +D L A T +L + + +L+ Sbjct: 49 LLLAGILAVLAWWLRGLLAGVLSFAGLAL-IDSVELWGEAMATLSLVLVSTLSTLVIAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+SRR+ V+ P+LD MQ++P + +L +++F G V G IFA+ Sbjct: 108 LGVWAARSRRVSAVVRPVLDFMQTMPAMVYLIPGIIFFGV---GVVPGIIATIIFALPPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDGELVEAAEAFGTTPRDTLLRVQLPLAVPTIMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 220 MVVIAGMVGGGGLGGA-------VYRAIGNVDIGLGFEAGVSIVILAMYLDRI 265 Score = 80.0 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 61/180 (33%), Gaps = 9/180 (5%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQ-----DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 ++ G+ +AW G + ++ D + + T+ V+V + +I +P+ Sbjct: 49 LLLAGILAVLAWWLRGLLAGVLSFAGLALIDSVELWGEAMATLSLVLVSTLSTLVIAVPL 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 G+W +S+ ++P + PA V+ + + + + Sbjct: 109 GVWAARSRRVSAVVRPVLDFMQTMPAMVYLIPGIIFFGVGVVPGIIATIIF----ALPPG 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F T + LP P + G + +++ Sbjct: 165 VRMTELGIRQVDGELVEAAEAFGTTPRDTLLRVQLPLAVPTIMAGVNQVIMLGLSMVVIA 224 >gi|170740515|ref|YP_001769170.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gi|168194789|gb|ACA16736.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 257 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T++RV+ ++AS + +P+GI +G + + ++PF PA+ F PL++ Sbjct: 65 GMTVWRVLGGFLLASAVAVPLGILMGAYKPVEAFLEPFVSFARYLPASAFVPLLILWAGI 124 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L++ G+ + I+ V A D E A + R +++P Sbjct: 125 GEMQK----LLVIFIGSVFQIVLMVAVAVGAVRRDLVEAAYTLGAGDSGIIRRVLIPATA 180 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G AW IV+E+ ++G+G I ES + +++ G++++ Sbjct: 181 PDIAETLRLVLGWAWTYVIVAELIG------SSSGIGHMIIESQALLATGQIIFGIIVIG 234 Query: 564 CFVLALNRFL 573 LA + Sbjct: 235 LIGLASDFLF 244 Score = 90.4 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 75/215 (34%), Gaps = 14/215 (6%) Query: 45 PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPIL 104 P +V + L T R+L +++ L + + L P + Sbjct: 44 PIAMVRDGWLLLTRFGFLSDIGMTVWRVLGGFLLASAVAVPLGILMGAYKPVEAFLEPFV 103 Query: 105 DIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRD 164 + +P F+ +++ E+ + IF V+ + + ++ + RD Sbjct: 104 SFARYLPASAFVPLLILWAGIG--------EMQKLLVIFIGSVFQIVLMVAVAVGAVRRD 155 Query: 165 LEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPG 224 L E + + + +P + P + + + + W +V+ +E+I G Sbjct: 156 LVEAAYTLGAGDSGIIRRVLIPATAPDIAETLRLVLGWAWTYVIVAELIGSSS------G 209 Query: 225 IGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 IG I + I++ ++ + + D L Sbjct: 210 IGHMIIESQALLATGQIIFGIIVIGLIGLASDFLF 244 >gi|146278861|ref|YP_001169020.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] gi|145557102|gb|ABP71715.1| binding-protein-dependent transport systems inner membrane component [Rhodobacter sphaeroides ATCC 17025] Length = 303 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 15/204 (7%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + + L + T + ++++ AA+S R+ V+ P+LD+MQ++P Sbjct: 97 LAIGWFGLWRDTMVTLAMVSVCTGMAVVIGLPIGIAAARSDRMQRVINPVLDVMQTLPSF 156 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 +L VV F GKV G I+A+ M + + + E + +F Sbjct: 157 VYLIPVVVIFG---IGKVPGMIAVVIYAVP-----PMIRLTNLGIRLVDAQVLEAAEAFG 208 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 SG QK W + +P ++P L+ + ++ VV + M+ VG G+G + AI Sbjct: 209 SSGRQKLWNVQLPLALPALMTGVNQTIMMALSMVVVASMVGVG-------GLGKNVLQAI 261 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQ 257 Q ++ + ++D+ Sbjct: 262 NNQFFTLGFLNGFALVAIAIIFDR 285 Score = 77.7 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 86/276 (31%), Gaps = 18/276 (6%) Query: 296 RFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGV 355 R I + + S + L + F ++ +L + W Sbjct: 28 RTIDGTFRDIVRSWSGAIDAATAPLQIALNALERAFTSTPWIVVLALVLALVW------- 80 Query: 356 AIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 A +W+ + + +T+ V V +A +I +P+GI + Sbjct: 81 AGSRSWRIVAGTAVAMLAIGWFGLWRDTMVTLAMVSVCTGMAVVIGLPIGIAAARSDRMQ 140 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 I P ++ P+ V+ VV + + + + ++ G Sbjct: 141 RVINPVLDVMQTLPSFVYLIPVVVIFGIGKVPGMIAVVIY----AVPPMIRLTNLGIRLV 196 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 E A +F +G + + LP P +TG A + +V+ + G Sbjct: 197 DAQVLEAAEAFGSSGRQKLWNVQLPLALPALMTGVNQTIMMALSMVVVASMVGVG----- 251 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F L + + +R Sbjct: 252 --GLGKNVLQAINNQFFTLGFLNGFALVAIAIIFDR 285 >gi|260549387|ref|ZP_05823606.1| LOW QUALITY PROTEIN: ABC-type nitrate/sulfonate/bicarbonate transport system [Acinetobacter sp. RUH2624] gi|260407496|gb|EEX00970.1| LOW QUALITY PROTEIN: ABC-type nitrate/sulfonate/bicarbonate transport system [Acinetobacter sp. RUH2624] Length = 253 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 54 ITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPIL 113 + L L + +T R+L +I ++A S+ L P ++SIP L Sbjct: 46 LDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSL 105 Query: 114 GFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFR 173 ++ +++ K+ + A F +T + ++ N+ + L EV + +R Sbjct: 106 AWIPLLLLWLGIDEGSKITLIAIGAFFPTYT--------NTVAAIHNVDKKLIEVGKVYR 157 Query: 174 LSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAI 233 L+ +Q+ + +P + PG++ + S++ W F++A+E+I GIG ++ Sbjct: 158 LNAFQRVLSIILPAASPGILTGLRNSLNLSWMFMIAAELIA------ATQGIGYLLSDGR 211 Query: 234 KEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 + ++ A++ + + + D L+ + + W ++R Sbjct: 212 ETSRPDIVIIAIILLALLGKITDSLM-KLIENWLLRWR 248 Score = 113 bits (284), Expect = 7e-23, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + I+ +RV+ II S + + IW+G + ++P + + P+ + PL++ Sbjct: 53 LFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEPTFSAIKSIPSLAWIPLLL 112 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + + L+ G + N +A EV + + ++ II Sbjct: 113 LWLGIDEGSK----ITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGKVYRLNAFQRVLSII 168 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 LP P +TG + +W I +E+ + T G+G +++ E Sbjct: 169 LPAASPGILTGLRNSLNLSWMFMIAAELIA------ATQGIGYLLSDGRE 212 >gi|240140554|ref|YP_002965034.1| glycine/betaine/proline transporter, membrane component of ABC transporter [Methylobacterium extorquens AM1] gi|254563044|ref|YP_003070139.1| glycine/betaine/proline ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|240010531|gb|ACS41757.1| glycine/betaine/proline transporter, membrane component of ABC transporter [Methylobacterium extorquens AM1] gi|254270322|emb|CAX26318.1| glycine/betaine/proline transporter, membrane component of ABC transporter [Methylobacterium extorquens DM4] Length = 283 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L Q T + + A +L+ A SRR PILD+MQ++P +L + Sbjct: 87 LWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQTLPSFVYLIPAL 146 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +F ++A FA V + + N+P +L E S +F S QK Sbjct: 147 PFFGLG--------AVSACFATIVFSVPPVIRLTALGIRNVPSELVEASDAFGSSATQKL 198 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P ++ + +M VV + MI G G+G + +I+ + A Sbjct: 199 FKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGRAVWQSIQRLEAGA 251 Query: 241 ILYAMLTMLGVIFLYDQL 258 A + ++ V + D++ Sbjct: 252 GFEAGIGIVIVAVILDRV 269 Score = 81.1 bits (199), Expect = 5e-13, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 14/264 (5%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--QSIGYIV 368 N + L + + + W C+ + IG + Sbjct: 16 NGLDWLTEHGSWLTRAVSRTVSDWIETLTTALVAIPPWLCIAVAAFAAYRAGGRKIGLLT 75 Query: 369 NHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +W + T+ V + A +I +PVGIW P ++ Sbjct: 76 LVGLLFLWNLRLWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQT 135 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P+ V+ + ++ + + ++ G P++ E + +F Sbjct: 136 LPSFVYLIPALPFFGLGAVSACFATIVF----SVPPVIRLTALGIRNVPSELVEASDAFG 191 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + + + LP P + G A + +++ + G GLG + +S Sbjct: 192 SSATQKLFKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGRAVWQSI 244 Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571 ++ + + + L+R Sbjct: 245 QRLEAGAGFEAGIGIVIVAVILDR 268 >gi|218547805|ref|YP_002381596.1| glycine betaine transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218355346|emb|CAQ87953.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324111312|gb|EGC05294.1| inner membrane transport system [Escherichia fergusonii B253] gi|325496272|gb|EGC94131.1| glycine betaine transporter membrane protein [Escherichia fergusonii ECD227] Length = 354 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPMAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 15/230 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 + +F +G+ ++ ++ + + V+ ++ +I + Sbjct: 109 AIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCIVIGL 164 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 165 PLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALP 220 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 I+ I G + P D E + SF + + + LP P + G A + + Sbjct: 221 PIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVV 280 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++ + + G GLG + + +G + + + L+R Sbjct: 281 IASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|312138775|ref|YP_004006111.1| ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|311888114|emb|CBH47426.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] Length = 280 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ RV++ ++ ++ + +G+ GF + I P Q+L P PL + Sbjct: 84 AVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTVPFLGLIPLFIIWFGI 143 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ G + + N+ AG + E A + + ++ +++LPG Sbjct: 144 G----EQPKVFLVALGVLFPLYLNLFAGIRSIDGKLIEAAETLGLNKFQLALHVVLPGAL 199 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG + G AW A IV+E + GLG I + V+ G+L+ Sbjct: 200 PQALTGLRMSLGVAWLALIVAEQIN------ADAGLGYLINNARIYFRIDIVIFGLLVYA 253 Query: 564 CFVLALNRFL 573 LA + + Sbjct: 254 FLGLATDAIV 263 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 96/233 (41%), Gaps = 17/233 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +V SL + + R+L V+ +L + LA SR + + + Sbjct: 60 LASPAQVVAAAAELWSDGSLQDALAVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAID 119 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + +++++P LG + +++F E +F + ++ + +++ + +I Sbjct: 120 PPIQMLRTVPFLGLIPLFIIWFGIG--------EQPKVFLVALGVLFPLYLNLFAGIRSI 171 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E + + L+ +Q ++ +P ++P + + MS+ W ++ +E I Sbjct: 172 DGKLIEAAETLGLNKFQLALHVVLPGALPQALTGLRMSLGVAWLALIVAEQI------NA 225 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 G+G I A + +++ +L + D + L ++ W ++ Sbjct: 226 DAGLGYLINNARIYFRIDIVIFGLLVYAFLGLATDAIVRALEGRLLTWRKTYQ 278 >gi|312116288|ref|YP_004013884.1| binding-protein-dependent transporters inner membrane component [Rhodomicrobium vannielii ATCC 17100] gi|311221417|gb|ADP72785.1| binding-protein-dependent transport systems inner membrane component [Rhodomicrobium vannielii ATCC 17100] Length = 289 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 95/273 (34%), Gaps = 28/273 (10%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVI--WL 382 P+ + +R ++ ++ VA ++N + V+ W+ Sbjct: 19 LQLPKTTASRRTKRRKPPANLVYGLPLLFAVATLWELAPRLGLLNPIFFPAFSEVVSAWV 78 Query: 383 GCI-----------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPAN 431 I ++ R ++A ++ +P+G+ +G F Q L P Sbjct: 79 DLIVNGSLLSDVWASLRRSATGFLLAVLVAVPLGLLMGSYRKFERLTDLFVQTLRNTPQY 138 Query: 432 VFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGW 491 PL V + + + + + W +L N I+G + + A S + Sbjct: 139 ALLPLFVLTMGIGEASK----IAITFYASMWMLLINTISGVKSVDPTLIKAARSMGANDF 194 Query: 492 RWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGS 551 +R ++LP P GA A + + I +E+ + +G+G I + Sbjct: 195 DLFRNVVLPASVPSITAGARLAVKASVVSVIGAEMLA------AQSGVGHLIQNAQLMMQ 248 Query: 552 FPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584 PE+ G+L + +N L ++ + Sbjct: 249 VPEMYAGILTLTVIGTTINYLL-----VWAEKK 276 Score = 96.1 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 77/211 (36%), Gaps = 19/211 (9%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 SL + R + ++++L L R+ + + +++ P L Sbjct: 84 GSLLSDVWASLRRSATGFLLAVLVAVPLGLLMGSYRKFERLTDLFVQTLRNTPQYALLPL 143 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V+ E + I F + +W + + + ++ L + +RS + + Sbjct: 144 FVLTMGIG--------EASKIAITFYASMWMLLINTISGVKSVDPTLIKAARSMGANDFD 195 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P S+P + +++ V+ +EM+ G+G I A + Sbjct: 196 LFRNVVLPASVPSITAGARLAVKASVVSVIGAEMLA------AQSGVGHLIQNAQLMMQV 249 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 + +LT+ + + LL VW+ K Sbjct: 250 PEMYAGILTLTVIGTTINYLL-----VWAEK 275 >gi|333001015|gb|EGK20585.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-272] gi|333015481|gb|EGK34820.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-227] Length = 354 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|15803198|ref|NP_289230.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 EDL933] gi|15832795|ref|NP_311568.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. Sakai] gi|168750921|ref|ZP_02775943.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168755423|ref|ZP_02780430.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168762473|ref|ZP_02787480.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168768769|ref|ZP_02793776.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168774790|ref|ZP_02799797.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168778660|ref|ZP_02803667.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168787933|ref|ZP_02812940.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168800563|ref|ZP_02825570.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|193065974|ref|ZP_03047033.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E22] gi|194427910|ref|ZP_03060456.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli B171] gi|195938432|ref|ZP_03083814.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807590|ref|ZP_03249927.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208814097|ref|ZP_03255426.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208820172|ref|ZP_03260492.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209396362|ref|YP_002272144.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|217326993|ref|ZP_03443076.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218690806|ref|YP_002399018.1| glycine betaine transporter membrane protein [Escherichia coli ED1a] gi|218701173|ref|YP_002408802.1| glycine betaine transporter membrane protein [Escherichia coli IAI39] gi|218706178|ref|YP_002413697.1| glycine betaine transporter membrane protein [Escherichia coli UMN026] gi|254794625|ref|YP_003079462.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|260845326|ref|YP_003223104.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O103:H2 str. 12009] gi|261225975|ref|ZP_05940256.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256767|ref|ZP_05949300.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291284011|ref|YP_003500829.1| Glycine betaine/L-proline ABC transporter permease protein [Escherichia coli O55:H7 str. CB9615] gi|293406175|ref|ZP_06650101.1| glycine betaine transporter membrane protein [Escherichia coli FVEC1412] gi|293412036|ref|ZP_06654759.1| glycine betaine transporter membrane protein [Escherichia coli B354] gi|298381912|ref|ZP_06991509.1| glycine betaine transporter membrane protein [Escherichia coli FVEC1302] gi|300898659|ref|ZP_07116980.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300941046|ref|ZP_07155565.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|301306005|ref|ZP_07212085.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301327382|ref|ZP_07220631.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|306812441|ref|ZP_07446639.1| glycine betaine transporter membrane protein [Escherichia coli NC101] gi|331648399|ref|ZP_08349487.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli M605] gi|331654161|ref|ZP_08355161.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli M718] gi|331658789|ref|ZP_08359731.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA206] gi|331669416|ref|ZP_08370262.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA271] gi|12517117|gb|AAG57788.1|AE005496_11 high-affinity transport system for glycine betaine and proline [Escherichia coli O157:H7 str. EDL933] gi|13363012|dbj|BAB36964.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli O157:H7 str. Sakai] gi|187769535|gb|EDU33379.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188014969|gb|EDU53091.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|189003312|gb|EDU72298.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189357321|gb|EDU75740.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189362133|gb|EDU80552.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189367256|gb|EDU85672.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189372114|gb|EDU90530.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189377180|gb|EDU95596.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|192926388|gb|EDV81023.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli E22] gi|194414143|gb|EDX30419.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli B171] gi|208727391|gb|EDZ76992.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208735374|gb|EDZ84061.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208740295|gb|EDZ87977.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209157762|gb|ACI35195.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209762218|gb|ACI79421.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|209762220|gb|ACI79422.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|209762222|gb|ACI79423.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|209762224|gb|ACI79424.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|209762226|gb|ACI79425.1| high-affinity glycine betaine / proline transport system protein [Escherichia coli] gi|217319360|gb|EEC27785.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218371159|emb|CAR18990.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218428370|emb|CAR09299.2| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|218433275|emb|CAR14175.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|222034378|emb|CAP77119.1| glycine betaine/L-proline transport system permease [Escherichia coli LF82] gi|254594025|gb|ACT73386.1| glycine betaine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257760473|dbj|BAI31970.1| high-affinity transport system for glycine betaine and proline, membrane component [Escherichia coli O103:H2 str. 12009] gi|290763884|gb|ADD57845.1| Glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli O55:H7 str. CB9615] gi|291426181|gb|EFE99213.1| glycine betaine transporter membrane protein [Escherichia coli FVEC1412] gi|291468807|gb|EFF11298.1| glycine betaine transporter membrane protein [Escherichia coli B354] gi|298277052|gb|EFI18568.1| glycine betaine transporter membrane protein [Escherichia coli FVEC1302] gi|300357687|gb|EFJ73557.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300454210|gb|EFK17703.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300838716|gb|EFK66476.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300846036|gb|EFK73796.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|305854479|gb|EFM54917.1| glycine betaine transporter membrane protein [Escherichia coli NC101] gi|312947213|gb|ADR28040.1| glycine betaine transporter membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|315254454|gb|EFU34422.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|315298698|gb|EFU57952.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|320189009|gb|EFW63668.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli O157:H7 str. EC1212] gi|320640667|gb|EFX10203.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. G5101] gi|320646032|gb|EFX15009.1| glycine betaine transporter membrane protein [Escherichia coli O157:H- str. 493-89] gi|320651332|gb|EFX19763.1| glycine betaine transporter membrane protein [Escherichia coli O157:H- str. H 2687] gi|320656723|gb|EFX24611.1| glycine betaine transporter membrane protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662266|gb|EFX29663.1| glycine betaine transporter membrane protein [Escherichia coli O55:H7 str. USDA 5905] gi|320667317|gb|EFX34275.1| glycine betaine transporter membrane protein [Escherichia coli O157:H7 str. LSU-61] gi|323159819|gb|EFZ45791.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli E128010] gi|323188440|gb|EFZ73726.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli RN587/1] gi|323966930|gb|EGB62358.1| inner membrane transport system [Escherichia coli M863] gi|323978711|gb|EGB73793.1| inner membrane transport system [Escherichia coli TW10509] gi|324005775|gb|EGB74994.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|326338607|gb|EGD62433.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli O157:H7 str. 1044] gi|326342865|gb|EGD66633.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli O157:H7 str. 1125] gi|327251396|gb|EGE63082.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli STEC_7v] gi|330908709|gb|EGH37223.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli AA86] gi|331042146|gb|EGI14288.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli M605] gi|331047543|gb|EGI19620.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli M718] gi|331053371|gb|EGI25400.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA206] gi|331063084|gb|EGI34997.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA271] Length = 354 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|91209432|ref|YP_539418.1| taurine transporter subunit [Escherichia coli UTI89] gi|117622634|ref|YP_851547.1| taurine transporter subunit [Escherichia coli APEC O1] gi|218557280|ref|YP_002390193.1| taurine transporter subunit [Escherichia coli S88] gi|237707643|ref|ZP_04538124.1| taurine transporter subunit [Escherichia sp. 3_2_53FAA] gi|91071006|gb|ABE05887.1| taurine transport system permease protein TauC [Escherichia coli UTI89] gi|115511758|gb|ABI99832.1| taurine transport system permease protein TauC [Escherichia coli APEC O1] gi|218364049|emb|CAR01714.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|226898853|gb|EEH85112.1| taurine transporter subunit [Escherichia sp. 3_2_53FAA] gi|294490726|gb|ADE89482.1| taurine uptake ABC transporter, permease protein [Escherichia coli IHE3034] gi|307628162|gb|ADN72466.1| taurine transporter subunit [Escherichia coli UM146] gi|315289831|gb|EFU49221.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315299597|gb|EFU58845.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|323953018|gb|EGB48886.1| inner membrane transport system [Escherichia coli H252] gi|323958561|gb|EGB54264.1| inner membrane transport system [Escherichia coli H263] Length = 275 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L PI+++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|220904097|ref|YP_002479409.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868396|gb|ACL48731.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 280 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 15/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L T +LSA ++S+L LAA S +++P+LD+MQ++P +L Sbjct: 84 GLWTPTISTLALVLSATLLSVLVGVPCGILAAMSPVARKIVMPVLDVMQTMPAFVYLIPA 143 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + +F +++A+ A V + +PRDL E + +F + Q+ Sbjct: 144 IPFFGIG--------KVSAVVATVIFSVPPAIRFTCLGIQQVPRDLVECTEAFGATRMQR 195 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + L +P +MP +V + ++ V + MI G+G + AI+ ++ Sbjct: 196 LYKLELPLAMPTIVAGVNQTIMLALSMAVIAAMI-------GARGLGGEVWKAIQRLNIG 248 Query: 240 AILYAMLTMLGVIFLYDQLL 259 A L ++ V D+L Sbjct: 249 MGFEAGLGIVIVAITLDRLF 268 Score = 77.7 bits (190), Expect = 5e-12, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 70/208 (33%), Gaps = 11/208 (5%) Query: 366 YIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 ++ F L + T+ V+ +++ ++ +P GI P + P ++ Sbjct: 72 FVALGFALLWNLGLWTPTISTLALVLSATLLSVLVGVPCGILAAMSPVARKIVMPVLDVM 131 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 PA V+ + ++ + + + + G P D E + Sbjct: 132 QTMPAFVYLIPAIPFFGIGKVSAVVATVIF----SVPPAIRFTCLGIQQVPRDLVECTEA 187 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 F T + + LP P V G A + ++++ + GLG + + Sbjct: 188 FGATRMQRLYKLELPLAMPTIVAGVNQTIMLALSMAVIAAMIG-------ARGLGGEVWK 240 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFL 573 + ++ + L + + L+R Sbjct: 241 AIQRLNIGMGFEAGLGIVIVAITLDRLF 268 >gi|158520230|ref|YP_001528100.1| binding-protein-dependent transport systems inner membrane component [Desulfococcus oleovorans Hxd3] gi|158509056|gb|ABW66023.1| binding-protein-dependent transport systems inner membrane component [Desulfococcus oleovorans Hxd3] Length = 252 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 15/202 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV++ S+ I VG +G+R I + P L PA + PL++ + Sbjct: 60 AASLGRVLIGFFAGSVAGIVVGTAMGWRRLIDKTLSPIISLFYPIPALGWIPLLMLWIGI 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + P L+ + + +L+N + G D+ VA + + R ++LP Sbjct: 120 NEMLP----ITLIFICSFFPVLYNTVTGIKQVDADYILVARTLGASEGRILFAVVLPLAL 175 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TG G AW I +E+ + TG+GA + + ++I+C Sbjct: 176 PNIFTGLRLEAGMAWRTVIAAEMVAIP------TGIGALLMRAESLMRID-----IIIVC 224 Query: 564 CFVLALNRFLWHPLYLYGTRCL 585 VLA+ ++ L+ + R L Sbjct: 225 LIVLAVMCLVFENLFAWLERRL 246 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 82/211 (38%), Gaps = 19/211 (9%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + + R+L + V T R + L PI+ + IP LG++ Sbjct: 53 GVLGKSFAASLGRVLIGFFAGSVAGIVVGTAMGWRRLIDKTLSPIISLFYPIPALGWIPL 112 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++ E+ I IF + + ++ + + D V+R+ S + Sbjct: 113 LMLWIGIN--------EMLPITLIFICSFFPVLYNTVTGIKQVDADYILVARTLGASEGR 164 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 + + +P ++P + + + W V+A+EM+ + GIG+ + A + Sbjct: 165 ILFAVVLPLALPNIFTGLRLEAGMAWRTVIAAEMVAIPT------GIGALLMRAESLMRI 218 Query: 239 LAILYAMLTMLGVIFLYDQLLFRPMIVWSNK 269 I+ ++ + + L+F + W + Sbjct: 219 DIIIVCLIVLAVMC-----LVFENLFAWLER 244 >gi|82775852|ref|YP_402199.1| taurine transporter subunit [Shigella dysenteriae Sd197] gi|81240000|gb|ABB60710.1| taurine transport system permease protein [Shigella dysenteriae Sd197] Length = 275 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVLIGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG GG W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGGGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 104/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGISMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GGW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 GGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|16265231|ref|NP_438023.1| putative aliphatic sulfonate uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|307301542|ref|ZP_07581302.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti BL225C] gi|15141371|emb|CAC49883.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306903599|gb|EFN34187.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium meliloti BL225C] Length = 281 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 91/265 (34%), Gaps = 25/265 (9%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------- 383 +L+ S++ + + + +L +W G Sbjct: 24 YLRRSGAAAGSWLSRYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALL 83 Query: 384 ---CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 I++ R + A ++ IP+G+ +G I + + P QL A +P+ + Sbjct: 84 DDIAISLQRSGTAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILL 143 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + + ++ + T + +L + I+G + E+A + + +R ++LP Sbjct: 144 LGLGEASK----VFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLP 199 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 G P G + A I SE+ G+G + + P + + Sbjct: 200 GAVPSIFVGLRLSATTALLLLIASEMIG------ANKGIGFQVMNAQYNFQIPLMFAAIF 253 Query: 561 IMCCFVLALNRFLWHPLYLYGTRCL 585 I+ L N L ++ R L Sbjct: 254 ILAGLGLVSNYAL-----VFAQRRL 273 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 96/258 (37%), Gaps = 19/258 (7%) Query: 16 FPNIFDLLAFVLVIGIINILLHGIQETTVPR--DIVDIVPITLDVHSLPQYASRTTLRML 73 + + + LL L + I P I+ + + +L + + R Sbjct: 35 WLSRYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALLDDIAISLQRSG 94 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +A V +++ L + R + L P+L + + L ++ Sbjct: 95 TAFVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLG------- 147 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 E + +F IF + ++ + S + + L E++R + S F + +P ++P + Sbjct: 148 -EASKVFVIFWATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIF 206 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + +S + ++ASEMI GIG + A + + A+ + G+ Sbjct: 207 VGLRLSATTALLLLIASEMIGANK------GIGFQVMNAQYNFQIPLMFAAIFILAGLGL 260 Query: 254 LYDQLLF---RPMIVWSN 268 + + L R + WS+ Sbjct: 261 VSNYALVFAQRRLCRWSD 278 >gi|170680258|ref|YP_001744829.1| glycine betaine transporter membrane protein [Escherichia coli SMS-3-5] gi|170517976|gb|ACB16154.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli SMS-3-5] Length = 354 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|167840220|ref|ZP_02466904.1| taurine ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 284 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 13/244 (5%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + L + V + G +V D + ++ R+ +A + Sbjct: 48 AGWWLAARFEWVPAALLPGPEAVLRKLVVLSTEGFDDATLGQHLLASLSRIATAFALAVV 107 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 IPVGI I + + P + P + PL+V + L + L M Sbjct: 108 TAIPVGILIATNRIVRGVVDPVVEFYRPIPPLAYLPLMVVWFGIGDASKVLLIYLTMFA- 166 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + AGAS A+S T ++ R+++LP P +TG A G W+ Sbjct: 167 ---PLAIATAAGASGVSESRLRAAASLGATRFKLLRHVVLPSALPDILTGVRIALGAGWS 223 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN---RFLWHP 576 + +E+ + T GLG + ++ V+ G+L++ LAL R L Sbjct: 224 TLVAAELIA------ATRGLGFMLYSASRFLVTDVVIAGILVIGAIALALEIGLRALQRR 277 Query: 577 LYLY 580 L + Sbjct: 278 LTPW 281 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 89/215 (41%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L Q+ + R+ +A ++++ L A +R + V+ P+++ + IP L Sbjct: 81 GFDDATLGQHLLASLSRIATAFALAVVTAIPVGILIATNRIVRGVVDPVVEFYRPIPPLA 140 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F KV+ I+ + + + + + S Sbjct: 141 YLPLMVVWFGIGDASKVL--------LIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 192 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + ++ ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 193 TRFKLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMLYSASR 246 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 247 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 281 >gi|239932299|ref|ZP_04689252.1| glycine betaine transport system permease protein [Streptomyces ghanaensis ATCC 14672] gi|291440664|ref|ZP_06580054.1| glycine betaine transport system permease protein [Streptomyces ghanaensis ATCC 14672] gi|291343559|gb|EFE70515.1| glycine betaine transport system permease protein [Streptomyces ghanaensis ATCC 14672] Length = 872 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 94/233 (40%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI ++ ++ T LD L + + T ++ A VI+L+ + Sbjct: 49 LLLAGIFAVIAFWLRGTFAGVLTFVGFAF-LDSLELWEDSMVTLALVIVATVIALVISVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S R+ ++ P+LD MQ++P + +L +++F G G IFA+ Sbjct: 108 VGIWAARSDRVSAMVRPVLDFMQTLPAMIYLIPAILFFG---TGPAPGIVATLIFALAPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + ++L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALPTVMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + M+ G + AI + ++ + + ++ + D++ Sbjct: 220 MAAIAGMVGTGGLGGA-------VIEAIGQLNIGLGAESGIAIVILAIYLDRM 265 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 6/166 (3%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 + V + ++ + D L + +T+ V+V +IA +I +PV Sbjct: 49 LLLAGIFAVIAFWLRGTFAGVLTFVGFAFLDSLELWEDSMVTLALVIVATVIALVISVPV 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW +S+ ++P + PA ++ + + ++ P + +IF Sbjct: 109 GIWAARSDRVSAMVRPVLDFMQTLPAMIYL---IPAILFFGTGPAPGIVATLIF-ALAPG 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 + G + E A +F T + LP P + G Sbjct: 165 VRMTELGIRQVDKELVEAAEAFGTTPRNTLLRVQLPLALPTVMAGV 210 >gi|146311110|ref|YP_001176184.1| alkanesulfonate transporter permease subunit [Enterobacter sp. 638] gi|145317986|gb|ABP60133.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] Length = 263 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 84/239 (35%), Gaps = 17/239 (7%) Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391 R++ ++ +A + W S + + + + + I+ +R Sbjct: 11 RLAPWFLPVGIVIIWQIASSVGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAA 70 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 + I I + +G+ G + Q+L P PLV+ Sbjct: 71 IGFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 L+ GT + I N G E+A S+ ++G+ + ++ILPG P + G Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMVGVR 186 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 106/266 (39%), Gaps = 18/266 (6%) Query: 16 FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 F + V++ I + + + P +V+ L Q+ + ++ R Sbjct: 12 LAPWFLPVGIVIIWQIASSVGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAAI 71 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 I ++ SR +L + +++++P L + +++F Sbjct: 72 GFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID-------- 123 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A IF + ++ + + + + NI R L E++RS+ LSG+ F ++ +P ++P ++ Sbjct: 124 ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMV 183 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++ W ++ +E I GIG A + ++ A++ + L Sbjct: 184 GVRFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKL 237 Query: 255 YD---QLLFRPMIVWSNKFRLERTTG 277 D Q L R + W+ + L+ Sbjct: 238 ADVSAQWLERSWLRWNPAYSLKEANA 263 >gi|293408514|ref|ZP_06652353.1| conserved hypothetical protein [Escherichia coli B354] gi|291471692|gb|EFF14175.1| conserved hypothetical protein [Escherichia coli B354] Length = 275 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALHLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 102/253 (40%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77 + + + + L P+ ++ + P +L Q+ + + R++ A++ Sbjct: 33 VLLTVWWAVAALHLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALL 92 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++L S + +L P++++ + +P L +L V++F E + Sbjct: 93 AAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETS 144 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + + S + + + ++S S Q W++ +P ++P ++ + Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 + + GW +VA+E+I G+G + A + +L + + + FL + Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258 Query: 257 --QLLFRPMIVWS 267 + L R + W Sbjct: 259 GLRALQRRLTPWH 271 >gi|170767687|ref|ZP_02902140.1| taurine uptake ABC transporter, permease protein [Escherichia albertii TW07627] gi|170123175|gb|EDS92106.1| taurine uptake ABC transporter, permease protein [Escherichia albertii TW07627] Length = 275 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 96/266 (36%), Gaps = 19/266 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S + +L I+W + + Q + ++ Q Sbjct: 12 RWLKWRWPLSRQATLSISTLVVLLAIWWAVAALQLMSPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+ + + A +I IPVGI +G P + P +L P + Sbjct: 72 MDATLWQHLVASLTRIALALFAAVLIGIPVGIAMGLSPTTRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETTK----ILLIYLAIFAPVAMSALAGVKSAQQVRLRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G + + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGGSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPL 577 V+ G+ ++ L R L L Sbjct: 242 VLAGIAVIAVIAFLLELGLRALQRRL 267 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 96/249 (38%), Gaps = 20/249 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76 ++ + + + L P+ ++ + P +L Q+ + R+ A+ Sbjct: 32 VVLLAIWWAVAALQLMSPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLVASLTRIALAL 91 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 ++L S +L P++++ + +P L +L V++F E Sbjct: 92 FAAVLIGIPVGIAMGLSPTTRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ET 143 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 I I+ + + S + + + ++S S Q W++ +P ++P ++ + Sbjct: 144 TKILLIYLAIFAPVAMSALAGVKSAQQVRLRAAQSLGASRAQVLWFVILPGALPEILTGL 203 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 + + G +VA+E+I G+G + A E ++ A + ++ VI Sbjct: 204 RIGLGVGGSTLVAAELIA------ATRGLGFMVQSA-GEFLATDVVLAGIAVIAVIAFLL 256 Query: 257 QLLFRPMIV 265 +L R + Sbjct: 257 ELGLRALQR 265 >gi|317485696|ref|ZP_07944567.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316923061|gb|EFV44276.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 280 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 100/254 (39%), Gaps = 18/254 (7%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDI----VPITLDVHSLPQYA 65 FI+ + F N+ ++ F+ + + P ++VD + +L + Sbjct: 24 FITNKYFLNVVSIVLFLALWDYVAKEKIFRDSLARPLEVVDQLYRLTYMKFAGTNLIGHI 83 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 +T R+L + + + A ++ + ++ P+ D+ + +P + +++ +++F Sbjct: 84 WASTQRVLIGFIAASVVAVPLGLFMALNKYVNAIVKPLFDLFKPMPPIAWVSIAILWFGI 143 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 E++ +F I + Y + + DL +V R + +++ Sbjct: 144 G--------EMSKVFIIIIGTFVPCLLNAYNGVRLVDPDLYDVIRVLGGKRRDEIFHVCF 195 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P S P + + +S+S W V+A+E++ G+G I + +L M Sbjct: 196 PASFPAVFAGLQISLSSAWTCVLAAELM------NSRDGMGFLIKRGMDTHQPTLVLGGM 249 Query: 246 LTMLGVIFLYDQLL 259 + + + L+ Sbjct: 250 VLIAAAAYGTSLLV 263 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 70/186 (37%), Gaps = 10/186 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +I + RV++ I AS++ +P+G+++ ++++ ++P L P + + + Sbjct: 79 LIGHIWASTQRVLIGFIAASVVAVPLGLFMALNKYVNAIVKPLFDLFKPMPPIAWVSIAI 138 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 ++ ++I GT L N G D +V ++ Sbjct: 139 LWFGIGEMSK----VFIIIIGTFVPCLLNAYNGVRLVDPDLYDVIRVLGGKRRDEIFHVC 194 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 P FP G + AW + +E+ + G+G I + V+ G Sbjct: 195 FPASFPAVFAGLQISLSSAWTCVLAAELMNSRD------GMGFLIKRGMDTHQPTLVLGG 248 Query: 559 VLIMCC 564 ++++ Sbjct: 249 MVLIAA 254 >gi|256788772|ref|ZP_05527203.1| glycine betaine transport system permease protein [Streptomyces lividans TK24] gi|289772667|ref|ZP_06532045.1| glycine betaine transport system permease [Streptomyces lividans TK24] gi|289702866|gb|EFD70295.1| glycine betaine transport system permease [Streptomyces lividans TK24] Length = 872 Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI ++ ++ T +D L + A T +L A +I+L+ Sbjct: 49 LLLAGIFAVIAFWLRGTFAGILSFAGFAF-IDSLELWENAMVTLALLLVATIIALVVAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S R+ + P+LD MQ++P + +L +++F G G IFA+ Sbjct: 108 VGIWAARSDRVSAFVRPVLDFMQTLPAMIYLIPAILFFG---TGSAPGIVATLIFALAPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + ++L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPGNTLLRVQLPLALPTVMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + M+ G + +I + ++ A L ++ + D++ Sbjct: 220 MAAIAGMVGTGGLGGD-------VMESIGQLNVGLGAEAGLAIVILAIYLDRM 265 Score = 83.4 bits (205), Expect = 1e-13, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 86/262 (32%), Gaps = 12/262 (4%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 + + ++ F + + + + L + V + + I Sbjct: 16 WLLDNVSWLFTFLKDIFTGAYDGINAVLQAPEPLLLAGIFAVIAFWLRGTFAGI-LSFAG 74 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 F + D L + +T+ ++V IIA ++ +PVGIW +S+ ++P + PA Sbjct: 75 FAFIDSLELWENAMVTLALLLVATIIALVVAVPVGIWAARSDRVSAFVRPVLDFMQTLPA 134 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 ++ + P + +L+ + G + E A +F T Sbjct: 135 MIYLIPAILFFGTGSA-PGIVATLIFALA---PGVRMTELGIRQVDKELVEAAEAFGTTP 190 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + LP P + G + + ++ + G + + ES + Sbjct: 191 GNTLLRVQLPLALPTVMAGVNQVIMLGLSMAAIAGMVGTGGLGGD-------VMESIGQL 243 Query: 551 SFPEVVLGVLIMCCFVLALNRF 572 + L + + L+R Sbjct: 244 NVGLGAEAGLAIVILAIYLDRM 265 >gi|255283057|ref|ZP_05347612.1| taurine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] gi|255266359|gb|EET59564.1| taurine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] Length = 261 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 79/214 (36%), Gaps = 10/214 (4%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 + Y + T D ++ ++ + + ++ +P+GI + + + Sbjct: 46 ILNTFWYKLTGGTVPDGSSLLENIWSSLKIALGGYAVGVLVGVPLGIGMAWNKRFELFAK 105 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P ++ PA + PL++ + + + ++ F N G Sbjct: 106 PLFDIIRPVPALAWIPLMILWLGIGYASKVG----IIFFAAFISATVNSYTGIRRTSQVH 161 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 V +F T + I +P P TG A G AW A + +E+ + T+GL Sbjct: 162 LWVGKTFGATNRQMLFKIAIPTALPMIFTGLRLALGSAWVALVAAEMLA------ATSGL 215 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 G I S G +++G+L + L LN L Sbjct: 216 GYMIQISRMMGRPDVIIVGMLTIGFVGLLLNTVL 249 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 84/205 (40%), Gaps = 14/205 (6%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D SL + + L + +L A ++R + P+ DI++ +P L ++ Sbjct: 61 DGSSLLENIWSSLKIALGGYAVGVLVGVPLGIGMAWNKRFELFAKPLFDIIRPVPALAWI 120 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 +++ Y K + IF + + T + Y + + V ++F + Sbjct: 121 PLMILWLGIGYASK--------VGIIFFAAFISATVNSYTGIRRTSQVHLWVGKTFGATN 172 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 Q + + +P ++P + + +++ W +VA+EM+ G+G I ++ Sbjct: 173 RQMLFKIAIPTALPMIFTGLRLALGSAWVALVAAEMLA------ATSGLGYMIQISRMMG 226 Query: 237 DLLAILYAMLTMLGVIFLYDQLLFR 261 I+ MLT+ V L + +L + Sbjct: 227 RPDVIIVGMLTIGFVGLLLNTVLEK 251 >gi|111021912|ref|YP_704884.1| ABC transporter, permease component [Rhodococcus jostii RHA1] gi|110821442|gb|ABG96726.1| ABC transporter, permease component [Rhodococcus jostii RHA1] Length = 291 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 94/257 (36%), Gaps = 14/257 (5%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCIT 386 P + L + + L ++ G+ + +V F +W + Sbjct: 43 PIAWRILKPSVAIVAFLALWEIAPRAGLVDEVFLPPFSTVVEAFFDLVKSGELWQHVSAS 102 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + R ++ +A +I IP+GI I + +S + P +L A P+ + + Sbjct: 103 LSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIGEE 162 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + L+I+ + IL N I+G + ASS ++ R ++ ++LP P Sbjct: 163 SK----IALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVPTI 218 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 TG A + I +E+ GLG I S P + G++ + Sbjct: 219 FTGIRMAAASSILVLIAAEMVG------AKAGLGYLITASQFNFQIPNMYAGIVAISVLG 272 Query: 567 LALN---RFLWHPLYLY 580 L LN + L + Sbjct: 273 LTLNAVLVLIERRLSRW 289 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 94/261 (36%), Gaps = 18/261 (6%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRT 68 I+ RI ++AF+ + I + P V L L Q+ S + Sbjct: 43 PIAWRILKPSVAIVAFLALWEIAPRAGLVDEVFLPPFSTVVEAFFDLVKSGELWQHVSAS 102 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R L ++++ A R + L PIL++ ++ L L ++ Sbjct: 103 LSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIG-- 160 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E + I + + + + + + + L + + S LS + F + +P + Sbjct: 161 ------EESKIALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAA 214 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P + + M+ + ++A+EM+ G+G I + + + ++ + Sbjct: 215 VPTIFTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQFNFQIPNMYAGIVAI 268 Query: 249 LGVIFLYD---QLLFRPMIVW 266 + + L+ R + W Sbjct: 269 SVLGLTLNAVLVLIERRLSRW 289 >gi|297623965|ref|YP_003705399.1| binding-protein-dependent transport systems inner membrane component [Truepera radiovictrix DSM 17093] gi|297165145|gb|ADI14856.1| binding-protein-dependent transport systems inner membrane component [Truepera radiovictrix DSM 17093] Length = 300 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 15/191 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T +L+A + +L L A S L P+LD MQ++P +L V +F Sbjct: 94 TLTLVLAAEALVVLLGVPLGILMALSDAAQRALTPLLDAMQTMPSFVYLIPAVTFFGL-- 151 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G V G +FA + + L +P+D+ E + +F + WQ+ + +P Sbjct: 152 -GLVPGVVATVVFA-----LPPLVRLTNLGLRQVPKDIVEAAEAFGGTRWQRLRKVELPA 205 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + P L+ + S+ VV + +I G G+G + + D+ A L Sbjct: 206 ARPMLLAGVNQSIMLSLSMVVIAALIGAG-------GLGQEVIRGMNTLDIALGFEAGLA 258 Query: 248 MLGVIFLYDQL 258 ++ + + D+L Sbjct: 259 IVIMAVVLDRL 269 Score = 78.0 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 11/189 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T+ V+ + ++ +P+GI + + P + P+ V+ V+ Sbjct: 92 ILTLTLVLAAEALVVLLGVPLGILMALSDAAQRALTPLLDAMQTMPSFVYLIPAVTFFGL 151 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + + + ++ G P D E A +F T W+ R + LP Sbjct: 152 GLVPGVVATVVF----ALPPLVRLTNLGLRQVPKDIVEAAEAFGGTRWQRLRKVELPAAR 207 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G + + + +++ + G GLG + L + Sbjct: 208 PMLLAGVNQSIMLSLSMVVIAALIGAG-------GLGQEVIRGMNTLDIALGFEAGLAIV 260 Query: 564 CFVLALNRF 572 + L+R Sbjct: 261 IMAVVLDRL 269 >gi|73669863|ref|YP_305878.1| glycine betaine/L-proline ABC transporter permease [Methanosarcina barkeri str. Fusaro] gi|72397025|gb|AAZ71298.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina barkeri str. Fusaro] Length = 274 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 16/233 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L I +I +L + + + + + L L + T +LS+ +++L+ Sbjct: 50 LFIAVIFLLAYFVGKRNIKLAAGTAIGFFLIQNMGLWTLSMETLALVLSSTLLALIIGIP 109 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L+AK+ L +L P+LD MQ++P +L +++F G V +FA+ + Sbjct: 110 LGILSAKNTTLSSILKPVLDFMQTMPPFVYLIPALIFFQL---GNVPSMIATVVFAMPPA 166 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + +P +L EV+ SF + WQK + +P ++P ++ + + Sbjct: 167 -----IRLTNLGIRQVPIELTEVADSFGSTSWQKLSKVELPVALPTIMAGVNQCIMLSLS 221 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + L I+ D+ A L+++ + D++ Sbjct: 222 MVVIAAMI-------GARGLGYQVLLGIQRVDIGMGFEAGLSIVIIAVFLDRI 267 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 14/229 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 + V+ +A + ++I F + + L T+ V+ ++A II IP Sbjct: 50 LFIAVIFLLAYFVGKRNIKLAAGTAIGFFLIQNMGLWTLSMETLALVLSSTLLALIIGIP 109 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 +GI +SS ++P + P V+ + ++ + + Sbjct: 110 LGILSAKNTTLSSILKPVLDFMQTMPPFVYLIPALIFFQLGNVPSMIATVVF----AMPP 165 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + G P + EVA SF T W+ + LP P + G + + ++ Sbjct: 166 AIRLTNLGIRQVPIELTEVADSFGSTSWQKLSKVELPVALPTIMAGVNQCIMLSLSMVVI 225 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + GLG + ++ L + + L+R Sbjct: 226 AAMIG-------ARGLGYQVLLGIQRVDIGMGFEAGLSIVIIAVFLDRI 267 >gi|21220116|ref|NP_625895.1| glycine betaine transport system permease [Streptomyces coelicolor A3(2)] gi|6119662|emb|CAB59473.1| glycine betaine transport system permease protein [Streptomyces coelicolor A3(2)] Length = 871 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 16/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +L+ GI ++ ++ T +D L + A T +L A +I+L+ Sbjct: 49 LLLAGIFAVIAFWLRGTFAGILSFAGFAF-IDSLELWENAMVTLALLLVATIIALVVAVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 AA+S R+ + P+LD MQ++P + +L +++F G G IFA+ Sbjct: 108 VGIWAARSDRVSAFVRPVLDFMQTLPAMIYLIPAILFFG---TGSAPGIVATLIFALAPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + ++L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDKELVEAAEAFGTTPGNTLLRVQLPLALPTVMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + M+ G + +I + ++ A L ++ + D++ Sbjct: 220 MAAIAGMVGTGGLGGD-------VMESIGQLNVGLGAEAGLAIVILAIYLDRM 265 Score = 83.4 bits (205), Expect = 1e-13, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 86/262 (32%), Gaps = 12/262 (4%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 + + ++ F + + + + L + V + + I Sbjct: 16 WLLDNVSWLFTFLKDIFTGAYDGINAVLQAPEPLLLAGIFAVIAFWLRGTFAGI-LSFAG 74 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 F + D L + +T+ ++V IIA ++ +PVGIW +S+ ++P + PA Sbjct: 75 FAFIDSLELWENAMVTLALLLVATIIALVVAVPVGIWAARSDRVSAFVRPVLDFMQTLPA 134 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 ++ + P + +L+ + G + E A +F T Sbjct: 135 MIYLIPAILFFGTGSA-PGIVATLIFALA---PGVRMTELGIRQVDKELVEAAEAFGTTP 190 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + LP P + G + + ++ + G + + ES + Sbjct: 191 GNTLLRVQLPLALPTVMAGVNQVIMLGLSMAAIAGMVGTGGLGGD-------VMESIGQL 243 Query: 551 SFPEVVLGVLIMCCFVLALNRF 572 + L + + L+R Sbjct: 244 NVGLGAEAGLAIVILAIYLDRM 265 >gi|91778565|ref|YP_553773.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691225|gb|ABE34423.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 281 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 92/231 (39%), Gaps = 13/231 (5%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIIIASI 399 ++ I+W V A G T ++ L ++ R+ + ++ A + Sbjct: 42 IVAIWWLAVAVFAAPGTLAAQFSPARAIETLPALITDDRLAVHIVTSLRRIAIGLLWALV 101 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +P+G IG + + + P Q L + P+ V + + L+ F Sbjct: 102 VGVPLGFLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGVGDR----AVYFLLAFA 157 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 W ++ + AG + + ++ S T Y+ +PGI + +TG A G W Sbjct: 158 AVWPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWYVYVPGIAAHVLTGVRLAIGILWI 217 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ ++GLG I ++ ++ ++ E+ +L++ L+ Sbjct: 218 VLVPAEMLG------VSSGLGYLILDTRDRLAYSELTAVILVIGALGFLLD 262 Score = 98.1 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 83/230 (36%), Gaps = 15/230 (6%) Query: 29 IGIINILLHGIQETT-VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + + G P ++ +P + L + + R+ ++ +L+ Sbjct: 48 LAVAVFAAPGTLAAQFSPARAIETLPALITDDRLAVHIVTSLRRIAIGLLWALVVGVPLG 107 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L + + L L P L ++ I L ++ V+ + A F + + V Sbjct: 108 FLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGVG--------DRAVYFLLAFAAV 159 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + S + +I + ++ S + + WY+ VP ++ + +++ W + Sbjct: 160 WPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWYVYVPGIAAHVLTGVRLAIGILWIVL 219 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 V +EM+ V G+G I + +L + + FL D Sbjct: 220 VPAEMLGVSS------GLGYLILDTRDRLAYSELTAVILVIGALGFLLDF 263 >gi|26246370|ref|NP_752409.1| taurine transporter subunit [Escherichia coli CFT073] gi|218688234|ref|YP_002396446.1| taurine transporter subunit [Escherichia coli ED1a] gi|227884628|ref|ZP_04002433.1| taurine transporter subunit [Escherichia coli 83972] gi|300988135|ref|ZP_07178572.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301049560|ref|ZP_07196514.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|306813164|ref|ZP_07447357.1| taurine transporter subunit [Escherichia coli NC101] gi|331656421|ref|ZP_08357383.1| taurine transport system permease protein TauC [Escherichia coli TA206] gi|26106768|gb|AAN78953.1|AE016756_136 Taurine transport system permease protein tauC [Escherichia coli CFT073] gi|218425798|emb|CAR06604.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|222032167|emb|CAP74906.1| Taurine transport system permease protein tauC [Escherichia coli LF82] gi|227838714|gb|EEJ49180.1| taurine transporter subunit [Escherichia coli 83972] gi|300298651|gb|EFJ55036.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300407549|gb|EFJ91087.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|305853927|gb|EFM54366.1| taurine transporter subunit [Escherichia coli NC101] gi|307552275|gb|ADN45050.1| taurine transport system permease protein TauC [Escherichia coli ABU 83972] gi|312944948|gb|ADR25775.1| taurine transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315294163|gb|EFU53514.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|331054669|gb|EGI26678.1| taurine transport system permease protein TauC [Escherichia coli TA206] Length = 275 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAILLTVWWVVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWVVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L PI+++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|293418437|ref|ZP_06660872.1| taurine transporter subunit [Escherichia coli B088] gi|300903373|ref|ZP_07121301.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|301301510|ref|ZP_07207645.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|291324965|gb|EFE64380.1| taurine transporter subunit [Escherichia coli B088] gi|300404668|gb|EFJ88206.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300843007|gb|EFK70767.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|315256185|gb|EFU36153.1| ABC transporter, permease protein [Escherichia coli MS 85-1] Length = 275 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|134282026|ref|ZP_01768732.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|134246555|gb|EBA46643.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 305] Length = 283 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 91 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 261 AIALALEIGLRALQRRLTPW 280 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 80 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280 >gi|118473365|ref|YP_885555.1| taurine transporter permease TauC [Mycobacterium smegmatis str. MC2 155] gi|118174652|gb|ABK75548.1| taurine transport system permease protein TauC [Mycobacterium smegmatis str. MC2 155] Length = 268 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 94/254 (37%), Gaps = 11/254 (4%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH-FTYQDVLYV 379 G R + + ++ L ++ G+ + + ++V FT + Sbjct: 11 GRGRRFRALTWRLVRPVVVIALFLGVWETAPRIGMVDNVFLPPLSHVVQAWFTLLGNGQL 70 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 ++ R + +A ++ IP+G+ IG+ ++ + P +L A P+ V Sbjct: 71 WEHVSASLSRALAGFALAILVSIPLGVAIGWYRPVADFLNPILELFRNTAALALLPVFVL 130 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + + L+++ + + IL N I+G + A S ++ R ++ ++L Sbjct: 131 ILGIGETSK----VALVVYASAFPILLNTISGVRTVDPLLIKSARSLGLSPVRLFQKVVL 186 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 P P TG A + I +E+ GLG I S P + G+ Sbjct: 187 PAAVPTIFTGLRMAAASSILVLIAAEMVG------AKAGLGYLITASQLNFQIPNMYAGI 240 Query: 560 LIMCCFVLALNRFL 573 + + + N L Sbjct: 241 VTIALVGVVFNSVL 254 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 82/204 (40%), Gaps = 14/204 (6%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L L ++ S + R L+ +++L + R + L PIL++ ++ L Sbjct: 65 LGNGQLWEHVSASLSRALAGFALAILVSIPLGVAIGWYRPVADFLNPILELFRNTAALAL 124 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L V+ E + + + + + + + + + L + +RS LS Sbjct: 125 LPVFVLILGIG--------ETSKVALVVYASAFPILLNTISGVRTVDPLLIKSARSLGLS 176 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 + F + +P ++P + + M+ + ++A+EM+ G+G I + Sbjct: 177 PVRLFQKVVLPAAVPTIFTGLRMAAASSILVLIAAEMVGAKA------GLGYLITASQLN 230 Query: 236 QDLLAILYAMLTMLGVIFLYDQLL 259 + + ++T+ V +++ +L Sbjct: 231 FQIPNMYAGIVTIALVGVVFNSVL 254 >gi|126442420|ref|YP_001063214.1| taurine ABC transporter permease [Burkholderia pseudomallei 668] gi|126221911|gb|ABN85416.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 668] Length = 283 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 91 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 261 AIALALEIGLRALQRRLTPW 280 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 80 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280 >gi|218529259|ref|YP_002420075.1| binding-protein-dependent transporters inner membrane component [Methylobacterium chloromethanicum CM4] gi|218521562|gb|ACK82147.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium chloromethanicum CM4] Length = 293 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 10/191 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV +A+ +P+G+ IG P + + + P Q+L P + PL + Sbjct: 100 ASLSRVYGGFALAAAAALPLGLMIGRVPLVRALLDPVLQILRPIPVTAWLPLAMILFGLG 159 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + L+ G + IL N + G + E A+ TG + ++LP P Sbjct: 160 ATS----AFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPAQFLRVVLPAALP 215 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TG G AW +V E+ TGLGA I E+ + V+ G+ ++ Sbjct: 216 SIFTGLRLGLGFAWVVIVVGEM------TGVQTGLGAVIMEARQLSRTEIVICGMGVIGV 269 Query: 565 FVLALNRFLWH 575 + + Sbjct: 270 AGFVSDWIVMR 280 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 82/213 (38%), Gaps = 17/213 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L + + R+ ++ + + + +L P+L I++ IP+ +L Sbjct: 92 ATLWAHLWASLSRVYGGFALAAAAALPLGLMIGRVPLVRALLDPVLQILRPIPVTAWLPL 151 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F +A F +F + + + + ++ L E + +G Sbjct: 152 AMILFGLGAT--------SAFFLVFLGAFYPILVNTVFGVRSVEPRLFEAAAMLGCTGPA 203 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 +F + +P ++P + + + + W +V EM V G+G+ I A + Sbjct: 204 QFLRVVLPAALPSIFTGLRLGLGFAWVVIVVGEMTGVQT------GLGAVIMEARQLSRT 257 Query: 239 LAILYAMLTMLGVIFLYDQLLF---RPMIVWSN 268 ++ M + F+ D ++ R ++ WS Sbjct: 258 EIVICGMGVIGVAGFVSDWIVMRVGRRLLSWSP 290 >gi|26249073|ref|NP_755113.1| glycine betaine transporter membrane protein [Escherichia coli CFT073] gi|215487999|ref|YP_002330430.1| glycine betaine transporter membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|227888212|ref|ZP_04006017.1| glycine betaine transporter membrane protein [Escherichia coli 83972] gi|301019056|ref|ZP_07183267.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|312965593|ref|ZP_07779823.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 2362-75] gi|331664235|ref|ZP_08365141.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA143] gi|331674199|ref|ZP_08374959.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA280] gi|331684296|ref|ZP_08384888.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H299] gi|26109480|gb|AAN81683.1|AE016765_85 Glycine betaine/L-proline transport system permease protein proW [Escherichia coli CFT073] gi|215266071|emb|CAS10491.1| high-affinity transport system for glycine betaine and proline; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|227834852|gb|EEJ45318.1| glycine betaine transporter membrane protein [Escherichia coli 83972] gi|284922620|emb|CBG35708.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli 042] gi|300399409|gb|EFJ82947.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|307554654|gb|ADN47429.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli ABU 83972] gi|312289742|gb|EFR17632.1| glycine betaine/L-proline transport system permease protein proW [Escherichia coli 2362-75] gi|331058166|gb|EGI30147.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA143] gi|331068293|gb|EGI39688.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli TA280] gi|331077911|gb|EGI49117.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli H299] Length = 354 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|323700263|ref|ZP_08112175.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. ND132] gi|323460195|gb|EGB16060.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans ND132] Length = 257 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 10/188 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +++RV+V +A++I +P+G+ I S + P + P PL + Sbjct: 66 SVYRVMVGWSLAAVIAVPLGLLIATSRRASHMVAPVMEFARYLPVVALVPLTLLYFGIGD 125 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ GT + ++ V + P D A++ + +R ++ PG P Sbjct: 126 AQK----FAIIFLGTFFQLVLMVADSVATVPADLSRAAATLGANRLQTYRLVLFPGALPG 181 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G AW +V+E+ + +GLG I + + + G++I+ Sbjct: 182 IMDDLRITVGWAWTYLVVAELVA------ANSGLGYMILRAQRFLAIDRIFAGLIIIGVL 235 Query: 566 VLALNRFL 573 L + Sbjct: 236 GLLTDYLF 243 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 91/212 (42%), Gaps = 17/212 (8%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L Y + R++ ++ + L A SRR ++ P+++ + +P++ + T+ Sbjct: 59 LFSYTWDSVYRVMVGWSLAAVIAVPLGLLIATSRRASHMVAPVMEFARYLPVVALVPLTL 118 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +YF + IF + + + S+ +P DL + + + Q + Sbjct: 119 LYFGIG--------DAQKFAIIFLGTFFQLVLMVADSVATVPADLSRAAATLGANRLQTY 170 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + P ++PG++ ++ +++ W ++V +E++ G+G I A + + Sbjct: 171 RLVLFPGALPGIMDDLRITVGWAWTYLVVAELVAANS------GLGYMILRAQRFLAIDR 224 Query: 241 ILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269 I ++ + + L D +LL R + WS K Sbjct: 225 IFAGLIIIGVLGLLTDYLFKLLTRIITPWSEK 256 >gi|318061285|ref|ZP_07980006.1| ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318078276|ref|ZP_07985608.1| ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 303 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 98/254 (38%), Gaps = 11/254 (4%) Query: 13 RRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 R++ P + ++ + V I+ + + P + + L Y + R Sbjct: 48 RKVLPPLISVVLVLAVWQILVWAKVTDSYKLPSPGAVWGELSDAWTRGKLLGYIWTSVSR 107 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 L +++L+ L ++ R + + PIL +QS+P + ++ V++ P Sbjct: 108 GLFGFLLALVIGTPLGLLVSRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGLNSPMMY 167 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 I V ++ + + +P R+ +G + W++ +P ++PG Sbjct: 168 A--------VILLGAVPSIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPG 219 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + + W ++A+E+I + G+G + + + A+ +L V Sbjct: 220 YLAGLKQGWAFSWRSLMAAEIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIV 277 Query: 252 IFLYDQLLFRPMIV 265 D L+F P+ Sbjct: 278 GIAIDLLIFSPLER 291 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 9/240 (3%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 ++ + W V + G + + +T +L IW ++ R + ++A + Sbjct: 61 LAVWQILVWAKVTDSYKLPSPGAVWGELSDAWTRGKLLGYIW---TSVSRGLFGFLLALV 117 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I P+G+ + + + I P L + P+ + P V + + + +++ G Sbjct: 118 IGTPLGLLVSRVRFVRAAIGPILSGLQSLPSVAWVPPAVLWLGL----NSPMMYAVILLG 173 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I +++G P + + TG R +I+LP P Y+ G +W Sbjct: 174 AVPSIANGLVSGVDQVPPLYLRAGRTLGATGLRGTWHIVLPAALPGYLAGLKQGWAFSWR 233 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579 + + +E+ + GLG + S V L + ++ +A++ ++ PL Sbjct: 234 SLMAAEIIASSPDLGI--GLGQLLENGRTNSSMSMVFLAIFLILIVGIAIDLLIFSPLER 291 >gi|297203214|ref|ZP_06920611.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] gi|197711296|gb|EDY55330.1| nitrate ABC transporter, permease [Streptomyces sviceus ATCC 29083] Length = 305 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 98/258 (37%), Gaps = 10/258 (3%) Query: 14 RIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRML 73 +I P + L ++V ++ ++ + P + L Y + R L Sbjct: 52 KILPPVIALAVVLVVWTLLYPVVDDPSKLPSPAAVGSTFKDAWLAGDLLGYIWTSVSRGL 111 Query: 74 SAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIG 133 +LL + A+ + + + PIL +QS+P + ++ V++ Sbjct: 112 LGFFFALLIGTPLGLIVARVKFIRAAIGPILSGLQSLPSVAWVPPAVIWLGLNNSMMYA- 170 Query: 134 AELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 I V ++ + + +P R+ +G + W++ +P ++PG V Sbjct: 171 -------VILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGIKGIWHVTLPAALPGYV 223 Query: 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 + + W ++A+E+I G+G + D+ + A+L +L V Sbjct: 224 AGLKQGWAFSWRSLMAAEIIA--QFPDLGVGLGQLLENGRTNSDMAMVFEAILLILFVGI 281 Query: 254 LYDQLLFRPMIVWSNKFR 271 D L+F P+ W + R Sbjct: 282 AIDLLIFSPLERWVLRSR 299 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 6/207 (2%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ R ++ A +I P+G+ + I + I P L + P+ + P Sbjct: 97 GDLLGYIWTSVSRGLLGFFFALLIGTPLGLIVARVKFIRAAIGPILSGLQSLPSVAWVPP 156 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + N + +++ G I +++G P F + TG + + Sbjct: 157 AVIWLGL----NNSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGIKGIWH 212 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LP P YV G +W + + +E+ + GLG + V Sbjct: 213 VTLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--QFPDLGVGLGQLLENGRTNSDMAMVF 270 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583 +L++ +A++ ++ PL + R Sbjct: 271 EAILLILFVGIAIDLLIFSPLERWVLR 297 >gi|301050521|ref|ZP_07197397.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300297777|gb|EFJ54162.1| ABC transporter, permease protein [Escherichia coli MS 185-1] Length = 354 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|283458841|ref|YP_003363485.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Rothia mucilaginosa DY-18] gi|283134900|dbj|BAI65665.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Rothia mucilaginosa DY-18] Length = 280 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 77/209 (36%), Gaps = 10/209 (4%) Query: 365 GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 + + I+ RV++ I +++ + +G IG + P Sbjct: 68 RVVSAGVELAQRGELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIAAPTIGA 127 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L A P+ + PL++ + + L+ G + + V A + E A Sbjct: 128 LRAVPSLAWVPLLLLWIGIGENSK----VTLVAIGAFFPVYTTVSAALAHVDPKLVEAAR 183 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 +F + G R + + LP + P V+G A AW + +E+ + GLG + Sbjct: 184 AFGLKGLRLFTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELLG------ASMGLGYLLT 237 Query: 545 ESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +S G ++L ++ + + + Sbjct: 238 DSQNNGRTDRLLLAIVALAVLGKITDALV 266 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 95/219 (43%), Gaps = 14/219 (6%) Query: 41 ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100 + P +V L ++ + +T R+L I + V L S + ++ Sbjct: 62 QLPSPDRVVSAGVELAQRGELGRHVAISTQRVLIGFGIGAVLGLVLGALIGLSAPVRLIA 121 Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P + ++++P L ++ +++ KV + A F ++T+ + +L + Sbjct: 122 APTIGALRAVPSLAWVPLLLLWIGIGENSKVTLVAIGAFFPVYTT--------VSAALAH 173 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 + L E +R+F L G + F + +P +P +V + ++++ W F+VA+E++ Sbjct: 174 VDPKLVEAARAFGLKGLRLFTTVQLPAVLPSVVSGLRLALAQAWLFLVAAELLGAS---- 229 Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G + + +L A++ + + + D L+ Sbjct: 230 --MGLGYLLTDSQNNGRTDRLLLAIVALAVLGKITDALV 266 >gi|220908632|ref|YP_002483943.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7425] gi|219865243|gb|ACL45582.1| binding-protein-dependent transport systems inner membrane component [Cyanothece sp. PCC 7425] Length = 294 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 11/253 (4%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-YQDVLYVI 380 + P+ ++ L ++W + S G ++ F ++ Sbjct: 37 RLGEEIPKPLQTGLMITSLALPLVLWWAVTTLVKIDPVFLPSPGAVLAAFGRLWQSGDLL 96 Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 ++ RV V +++++ IP+G+ +G I + ++P L+ PA F PL++ Sbjct: 97 KDTLASLGRVGVGFFLSALVSIPIGVLMGSFASIRALLEPLFGLVRYMPAPAFIPLLILY 156 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + L+ GT ++ V+ P D E +ILP Sbjct: 157 LGIG----EPPKIALIFMGTFFFNTLMVMDAVKFVPRDLIEATYMLGGNRREVLTQVILP 212 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 + P + + AW IVSE+ + T GLG I+ + E+ +G++ Sbjct: 213 HVLPGILDASRINLAAAWQLVIVSELIA------ATEGLGRRISVAGRFLRTDEIFVGLI 266 Query: 561 IMCCFVLALNRFL 573 ++ L+ + Sbjct: 267 VIGIIGLSFDLLF 279 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 95/246 (38%), Gaps = 15/246 (6%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84 VL + ++ P ++ L + + R+ +S L + Sbjct: 59 LVLWWAVTTLVKIDPVFLPSPGAVLAAFGRLWQSGDLLKDTLASLGRVGVGFFLSALVSI 118 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 L + +L P+ +++ +P F+ ++Y P K I IF Sbjct: 119 PIGVLMGSFASIRALLEPLFGLVRYMPAPAFIPLLILYLGIGEPPK--------IALIFM 170 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + T + ++ +PRDL E + + + + +P +PG++ ++++ W Sbjct: 171 GTFFFNTLMVMDAVKFVPRDLIEATYMLGGNRREVLTQVILPHVLPGILDASRINLAAAW 230 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 V+ SE+I G+G I++A + I ++ + + +D LLF+ ++ Sbjct: 231 QLVIVSELIA------ATEGLGRRISVAGRFLRTDEIFVGLIVIGIIGLSFD-LLFQYLL 283 Query: 265 VWSNKF 270 + K+ Sbjct: 284 RITCKW 289 >gi|283833775|ref|ZP_06353516.1| aliphatic sulfonates ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070436|gb|EFE08545.1| aliphatic sulfonates ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 263 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 83/239 (34%), Gaps = 17/239 (7%) Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391 R++ + +A + W S + + + + + I+ +R + Sbjct: 11 RLAPWFLPLGLVAIWQIASSMGWLSTRILPSPEGVVEAFWTLSASGELWQHLAISSWRAL 70 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 V I I + +G+ G + Q+L P PLV+ Sbjct: 71 VGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGI----DESA 126 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 L+ GT + I N G E+A S+ ++G+ + ++ILPG P + G Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMVGVR 186 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S G+G + E VV+ +++ + Sbjct: 187 FALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 108/265 (40%), Gaps = 18/265 (6%) Query: 16 FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 F L V + I + + + P +V+ L Q+ + ++ R L Sbjct: 12 LAPWFLPLGLVAIWQIASSMGWLSTRILPSPEGVVEAFWTLSASGELWQHLAISSWRALV 71 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 I ++ SR +L + +++++P L + +++F Sbjct: 72 GFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGID-------- 123 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A IF + ++ + + + + NI R L E++RS+ LSG+ F ++ +P ++P ++ Sbjct: 124 ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMV 183 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++ W ++ +E I GIG A + ++ A++ + L Sbjct: 184 GVRFALGLMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVVAIILYALLGKL 237 Query: 255 YD---QLLFRPMIVWSNKFRLERTT 276 D QLL R + W+ + ++ T Sbjct: 238 ADVSAQLLERVWLRWNPAYHVKEAT 262 >gi|332999415|gb|EGK19000.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri VA-6] Length = 354 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGACSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 ALP-----PIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 87.7 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGACSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|52424605|ref|YP_087742.1| ProW protein [Mannheimia succiniciproducens MBEL55E] gi|52306657|gb|AAU37157.1| ProW protein [Mannheimia succiniciproducens MBEL55E] Length = 338 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 T +L+++ LL A+S R ++ P+LD MQ+ P +L V+ F Sbjct: 131 MMITLALVLTSVSFCLLIGLPLGIWMARSTRASAIVKPVLDAMQTTPAFVYLVPIVMLFG 190 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA + + + +P L E +++F S Q + + Sbjct: 191 ---IGNVPGVVVTIIFA-----LPPIVRLTILGIQQVPEALIEAAQAFGASKKQLLYKVQ 242 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +MP ++ + ++ VV + MI VG G+G + I D+ Sbjct: 243 LPLAMPSIMAGVNQTLMLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGEAATG 295 Query: 245 MLTMLGVIFLYDQL 258 L ++ + + D+L Sbjct: 296 GLGIVLMAIVLDRL 309 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 86/234 (36%), Gaps = 16/234 (6%) Query: 344 LDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIAS 398 L++ V+ + + WQ + + T + + +G IT+ V+ + Sbjct: 87 LNVLPPTVMIILFTLLVWQFTHFRLALATLLSITLIGAVGAWNEMMITLALVLTSVSFCL 146 Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I +P+GIW+ S+ ++P + PA V+ +V N+ ++ I Sbjct: 147 LIGLPLGIWMARSTRASAIVKPVLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTII 202 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 I+ I G P E A +F + + + LP P + G + Sbjct: 203 FALPPIVRLTILGIQQVPEALIEAAQAFGASKKQLLYKVQLPLAMPSIMAGVNQTLMLSL 262 Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + E G L + + L+R Sbjct: 263 SMVVIASMIAVG-------GLGQMVLRGIGRLDMGEAATGGLGIVLMAIVLDRL 309 >gi|325676528|ref|ZP_08156206.1| sulfonate ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325552706|gb|EGD22390.1| sulfonate ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 280 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ RV++ ++ ++ + +G+ GF + I P Q+L P PL + Sbjct: 84 AVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAIDPPIQMLRTVPFLGLIPLFIIWFGI 143 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ G + + N+ AG + E A + + ++ +++LPG Sbjct: 144 G----EQPKVFLVALGVLFPLYLNLFAGIRSIDGKLIEAAETLGLNKFQLALHVVLPGAL 199 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG + G AW A IV+E + GLG I + V+ G+L+ Sbjct: 200 PQALTGLRMSLGVAWLALIVAEQIN------ADAGLGYLINNARIYFRIDIVIFGLLVYA 253 Query: 564 CFVLALNRFL 573 LA + + Sbjct: 254 FLGLATDAIV 263 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 96/233 (41%), Gaps = 17/233 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P +V SL + + R+L V+ +L + LA SR + + + Sbjct: 60 LASPAQVVAAAAELWSDGSLQDALAVSLQRVLLGAVLGILVAVLLGVLAGFSRIVELAID 119 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 P + +++++P LG + +++F E +F + ++ + +++ + +I Sbjct: 120 PPIQMLRTVPFLGLIPLFIIWFGIG--------EQPKVFLVALGVLFPLYLNLFAGIRSI 171 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E + + L+ +Q ++ +P ++P + + MS+ W ++ +E I Sbjct: 172 DGKLIEAAETLGLNKFQLALHVVLPGALPQALTGLRMSLGVAWLALIVAEQI------NA 225 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFR 271 G+G I A + +++ +L + D + L ++ W ++ Sbjct: 226 DAGLGYLINNARIYFRIDIVIFGLLVYAFLGLATDAIVRALEGRLLTWRKTYQ 278 >gi|254882041|ref|ZP_05254751.1| binding-protein-dependent transport system inner membrane component [Bacteroides sp. 4_3_47FAA] gi|319640951|ref|ZP_07995659.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_1_40A] gi|254834834|gb|EET15143.1| binding-protein-dependent transport system inner membrane component [Bacteroides sp. 4_3_47FAA] gi|317387396|gb|EFV68267.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_1_40A] Length = 274 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L+ + I + + ++ I I+ + L +T +LS+ +I+L Sbjct: 41 LMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + +A S+R +L PILD+MQ++P +L V++F G V GA IF Sbjct: 101 IVGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + Q + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTSLGIKQVPKNVVEASRSFGATPMQLLFKVQLPLALPTIMTGINQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 LMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L F V + +AW G V+ FT +L + +G T+ V+ IIA Sbjct: 40 ILMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 I+ +P+GIW + P L+ PA V+ V + + Sbjct: 100 LIVGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G P + E + SF T + + LP P +TG + Sbjct: 158 --AMPPVVRLTSLGIKQVPKNVVEASRSFGATPMQLLFKVQLPLALPTIMTGINQTILMS 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + + G + + + L+R Sbjct: 216 LSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|295397940|ref|ZP_06807997.1| glycine betaine/proline ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] gi|294973825|gb|EFG49595.1| glycine betaine/proline ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] Length = 285 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 17/239 (7%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 AF+L++ +I ++ + + +V + I L T +L + VIS++ Sbjct: 57 FAFILIVAVIAYFVNKKRLSLSAFALVGLGYIL--NQGLWSELMNTVTLVLVSSVISIII 114 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 +AKS+ + +L PILD MQ++P +L V +F G V G + IFA+ Sbjct: 115 GVPLGIWSAKSKTVHNILKPILDFMQTMPAFVYLIPAVAFFG---IGIVPGTFASVIFAL 171 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + I +L E + +F +G QK + + +P + ++ + ++ Sbjct: 172 PPTVRF-----TELGIKQISTELVEAADAFGSTGKQKLFKVELPLAKSTIMAGVNQTVML 226 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 VV + MI PG+G + A++ + + + L ++ + L D+L R Sbjct: 227 ALSMVVTASMI-------GAPGLGRQVLTALQRASVGSGFVSGLAIVILAILIDRLTNR 278 Score = 75.0 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 73/233 (31%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + I V+ + + Y + T+ V+V +I+ I Sbjct: 54 IPPFAFILIVAVIAYFVNKKRLSLSAFALVGLGYILNQGLWSELMNTVTLVLVSSVISII 113 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW + + ++P + PA V+ V+ + + Sbjct: 114 IGVPLGIWSAKSKTVHNILKPILDFMQTMPAFVYLIPAVAFFGIGIVPGTFASVIF---- 169 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + G + E A +F TG + + LP + G A + Sbjct: 170 ALPPTVRFTELGIKQISTELVEAADAFGSTGKQKLFKVELPLAKSTIMAGVNQTVMLALS 229 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + + GLG + + ++ S + L + + ++R Sbjct: 230 MVVTASMIG-------APGLGRQVLTALQRASVGSGFVSGLAIVILAILIDRL 275 >gi|229826019|ref|ZP_04452088.1| hypothetical protein GCWU000182_01383 [Abiotrophia defectiva ATCC 49176] gi|229789761|gb|EEP25875.1| hypothetical protein GCWU000182_01383 [Abiotrophia defectiva ATCC 49176] Length = 266 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 10/210 (4%) Query: 360 AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQ 419 + Y + T D +I ++ + + I +P+GI + + Sbjct: 50 VLNTFIYKLTGGTTPDGANLIEHILSSLKIALGGYGVGVFIGVPLGIAMAWSRKFERYAM 109 Query: 420 PFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDF 479 P L+ PA + PL++ + +L+ ++ F N G Sbjct: 110 PLFNLIRPVPALAWIPLMILWLGIGYLSKVG----IIFFAAFISATINSYTGIKKTNQVH 165 Query: 480 KEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGL 539 VA +F T + + +P P TG A G +W A + +E+ + T G+ Sbjct: 166 LWVARTFGATNRQMLFKVAIPTALPMIFTGLRLALGSSWVALVAAEMLA------ATRGV 219 Query: 540 GAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 G I G +++G++ + L + Sbjct: 220 GYMIYVGRMLGRPDIIIVGMITIGGIGLIM 249 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 82/199 (41%), Gaps = 14/199 (7%) Query: 57 DVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFL 116 D +L ++ + L + + A SR+ +P+ ++++ +P L ++ Sbjct: 65 DGANLIEHILSSLKIALGGYGVGVFIGVPLGIAMAWSRKFERYAMPLFNLIRPVPALAWI 124 Query: 117 TFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSG 176 +++ Y L+ + IF + + T + Y + + V+R+F + Sbjct: 125 PLMILWLGIGY--------LSKVGIIFFAAFISATINSYTGIKKTNQVHLWVARTFGATN 176 Query: 177 WQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQ 236 Q + + +P ++P + + +++ W +VA+EM+ G+G I + Sbjct: 177 RQMLFKVAIPTALPMIFTGLRLALGSSWVALVAAEMLA------ATRGVGYMIYVGRMLG 230 Query: 237 DLLAILYAMLTMLGVIFLY 255 I+ M+T+ G+ + Sbjct: 231 RPDIIIVGMITIGGIGLIM 249 >gi|256831080|ref|YP_003159808.1| binding-protein-dependent transport systems inner membrane component [Desulfomicrobium baculatum DSM 4028] gi|256580256|gb|ACU91392.1| binding-protein-dependent transport systems inner membrane component [Desulfomicrobium baculatum DSM 4028] Length = 278 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 18/240 (7%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH---SLPQYASRTTLRMLSAMVIS 79 L + + I ++ G+ T R + + L + L T +L A + + Sbjct: 45 LLLIPIPVFIVLVGAGVWFLTKERKLTLGSALGLALIWNMGLWTATVSTIALVLVATLCA 104 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 + AA S+ V++PILD+MQ++P +L + +F + AAI Sbjct: 105 IAIGVPLGICAAISKGTYRVVMPILDVMQTMPAFVYLIPAIPFFGLG--------KTAAI 156 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 F+ + + IP +L E S +F + Q+ + L +P + P ++ + + Sbjct: 157 FSTVIFSMPPAIRFTCLGIRQIPAELVECSTAFGATRMQRLYKLDLPLAAPTIMAGINQT 216 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + VV + MI G+G + AI+ + A + ++ V + D++L Sbjct: 217 VMLALSMVVIASMI-------GAKGLGGEVWKAIQRLQMGRGFEAGIAIVIVAMILDRVL 269 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 17/237 (7%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIII 396 L + V + W L +IW + T+ V+V + Sbjct: 44 GLLLIPIPVFIVLVGAGVWFLTKERKLTLGSALGLALIWNMGLWTATVSTIALVLVATLC 103 Query: 397 ASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 A I +P+GI + P ++ PA V+ + + ++ L + + Sbjct: 104 AIAIGVPLGICAAISKGTYRVVMPILDVMQTMPAFVYL---IPAIPFFGLGKTAAIFSTV 160 Query: 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 IF I F G P + E +++F T + + LP P + G Sbjct: 161 IFSMPPAIRF-TCLGIRQIPAELVECSTAFGATRMQRLYKLDLPLAAPTIMAGINQTVML 219 Query: 517 AWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 A + +++ + GLG + ++ ++ + + + L+R L Sbjct: 220 ALSMVVIASMIG-------AKGLGGEVWKAIQRLQMGRGFEAGIAIVIVAMILDRVL 269 >gi|298529248|ref|ZP_07016651.1| binding-protein-dependent transport systems inner membrane component [Desulfonatronospira thiodismutans ASO3-1] gi|298510684|gb|EFI34587.1| binding-protein-dependent transport systems inner membrane component [Desulfonatronospira thiodismutans ASO3-1] Length = 278 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 15/200 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + T ++ A +I++ +A S + ++ PILD MQ++P +L Sbjct: 87 GLWTATASTLSLVVVATLIAIAIGIPLGIIAGLSDWVYRIVRPILDFMQTLPAFVYLIPA 146 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 + +F ++AAIFA + + +P++L E + +F WQK Sbjct: 147 IPFFGLG--------KVAAIFATVVFSMPPAIRFTNLGIRQVPKELTECADAFGADRWQK 198 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + + +P + ++ + ++ VV + MI G G+G + AI+ Sbjct: 199 LFKIQLPLAKTTIMGGVNQTVMLALSMVVIAAMIGAG-------GLGGEVWRAIQRLQPG 251 Query: 240 AILYAMLTMLGVIFLYDQLL 259 A A + ++ + + D+LL Sbjct: 252 AGFEAGIGIVILAIILDRLL 271 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 11/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 T+ VVV +IA I IP+GI G + ++P + PA V+ + + + Sbjct: 93 ASTLSLVVVATLIAIAIGIPLGIIAGLSDWVYRIVRPILDFMQTLPAFVYL---IPAIPF 149 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L + ++F I F G P + E A +F W+ I LP Sbjct: 150 FGLGKVAAIFATVVFSMPPAIRF-TNLGIRQVPKELTECADAFGADRWQKLFKIQLPLAK 208 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + G A + +++ + G GLG + + ++ + + Sbjct: 209 TTIMGGVNQTVMLALSMVVIAAMIGAG-------GLGGEVWRAIQRLQPGAGFEAGIGIV 261 Query: 564 CFVLALNRFL 573 + L+R L Sbjct: 262 ILAIILDRLL 271 >gi|154245158|ref|YP_001416116.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154159243|gb|ABS66459.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 315 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 99/264 (37%), Gaps = 17/264 (6%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 +++ + P L + ++ + P D+ TL +L +T Sbjct: 59 LAKSLAPWALPLAILAVWQAAASLGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTG 118 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L+ + I F L + L L +++++P L + +++F Sbjct: 119 RALTGLAIGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPHLAIIPLVILWFGIG---- 174 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 E A IF + + + + Y + N+ L E++R + LS F + +P ++P Sbjct: 175 ----EEAKIFLVAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALP 230 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ + ++ W ++ +E I GIG A + ++ +L Sbjct: 231 SVLVGLRYALGIMWLTLIVAETIS------STEGIGYMTMNAREFLQTDVVVLGVLAYAL 284 Query: 251 VIFLYDQL---LFRPMIVWSNKFR 271 + L D L + + + W+ ++ Sbjct: 285 LGKLADSLTRGIEQRALAWNPAYQ 308 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 80/237 (33%), Gaps = 22/237 (9%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIW----------LGCITMFRVVVLII 395 W + +A+ A S+G++ + DV W C++ R + + Sbjct: 66 WALPLAILAVWQAAASLGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTGRALTGLA 125 Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 I I +G+ G + + Q+L P PLV+ L Sbjct: 126 IGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPHLAIIPLVILWFGIG----EEAKIFL 181 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + I N G E+A + ++ + I+LPG P + G A G Sbjct: 182 VAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALPSVLVGLRYALG 241 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 W IV+E S T G+G + E VVLGVL + Sbjct: 242 IMWLTLIVAETIS------STEGIGYMTMNAREFLQTDVVVLGVLAYALLGKLADSL 292 >gi|254387391|ref|ZP_05002638.1| glycine betaine ABC transport system permease [Streptomyces sp. Mg1] gi|194346183|gb|EDX27149.1| glycine betaine ABC transport system permease [Streptomyces sp. Mg1] Length = 598 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 92/233 (39%), Gaps = 15/233 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L++ I + + + +D L A T +L A +I+L+ + Sbjct: 48 PLLLAGILAVAAWWLRGLLAALLAMAGFALVDSIGLWDEAMSTLSLVLVATLITLVISVP 107 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A++S R+ VL P+LD MQ++P + +L +++F G V G IF++ Sbjct: 108 LGIWASRSDRVSAVLRPVLDFMQTMPAMVYLIPGIIFFGV---GVVPGIIATIIFSLPPG 164 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + +L E + +F + + +P ++P ++ + + G Sbjct: 165 -----VRMTELGIRQVDGELVEAADAFGTTPRDTLVRVQLPLALPTIMAGVNQVIMLGLS 219 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + M+ G + AI D+ A ++++ + D++ Sbjct: 220 MVVIAGMVGGGGLGGA-------VYKAIGNVDIGLGFEAGISIVILAMYLDRM 265 Score = 76.9 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 60/180 (33%), Gaps = 9/180 (5%) Query: 350 CVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPV 404 ++ G+ AW G + V +G T+ V+V +I +I +P+ Sbjct: 49 LLLAGILAVAAWWLRGLLAALLAMAGFALVDSIGLWDEAMSTLSLVLVATLITLVISVPL 108 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW +S+ ++P + PA V+ + + + + + Sbjct: 109 GIWASRSDRVSAVLRPVLDFMQTMPAMVYLIPGIIFFGVGVVPGIIATIIF----SLPPG 164 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 + G + E A +F T + LP P + G + +++ Sbjct: 165 VRMTELGIRQVDGELVEAADAFGTTPRDTLVRVQLPLALPTIMAGVNQVIMLGLSMVVIA 224 >gi|126641490|ref|YP_001084474.1| ABC taurine transporter permease subunit [Acinetobacter baumannii ATCC 17978] Length = 204 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ RV + +I A +I +P+G+W+G + + + P +LL P + PL+V Sbjct: 10 AASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGI 69 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 LL+ F ++ + G + + + A S + + + ++ILP Sbjct: 70 GETTK----VLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQVFWHVILPTAL 125 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ +TG G W+ + SE+ + G+G + + + V+LG++++ Sbjct: 126 PHIITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLITDTVILGIIVIA 179 Query: 564 CFVLALNRFL 573 ++ FL Sbjct: 180 IVAVSFELFL 189 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 +L Q+ + + R+ A++ +++ ++ + VL P++++++ IP L +L Sbjct: 3 ATLWQHLAASISRVFLALIAAVVIGVPLGLWMGLNKWVRAVLDPLVELLRPIPPLAYLPL 62 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + IF S + + S + + + E + S S Q Sbjct: 63 LVIWFGIG--------ETTKVLLIFFSILAPVIISSTHGVLSHQLNRERAALSLGASQSQ 114 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 FW++ +P ++P ++ + + + GW +VASE++ GIG + A + Sbjct: 115 VFWHVILPTALPHIITGIRIGLGVGWSTLVASELVA------ADRGIGFMVQSAAQFLIT 168 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 ++ ++ + V ++ L Sbjct: 169 DTVILGIIVIAIVAVSFELFL 189 >gi|167761037|ref|ZP_02433164.1| hypothetical protein CLOSCI_03435 [Clostridium scindens ATCC 35704] gi|167661271|gb|EDS05401.1| hypothetical protein CLOSCI_03435 [Clostridium scindens ATCC 35704] Length = 267 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ RV +A + + +G G P + P Q L A P + PL + Sbjct: 69 LISTLRVGKGFYVAGVTGMILGFLTGRVPLLRKMCDPMIQALRAVPGIGYLPLGMVWFGV 128 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 N L+ + + N GAS P + + +I P F Sbjct: 129 GEEN----TLFLISLAAFFPVYLNTQEGASRVPEIYIRAGKMLGAKKMILFFTVIFPAAF 184 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 + + G A G +W ++ E+ T G+GA + + G V+ ++++ Sbjct: 185 SHVIVGLRLALGVSWAYLVLGEM------TGVTKGIGAIMMDGRMLGHVDIVLACMVVIA 238 Query: 564 CFVLALN 570 + Sbjct: 239 ITGKFCD 245 Score = 99.2 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 75/201 (37%), Gaps = 14/201 (6%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 + + +TLR+ ++ + + L + L + P++ ++++P +G+L Sbjct: 62 GKMLENLLISTLRVGKGFYVAGVTGMILGFLTGRVPLLRKMCDPMIQALRAVPGIGYLPL 121 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +V+F E +F I + + + + + +P + Sbjct: 122 GMVWFGVG--------EENTLFLISLAAFFPVYLNTQEGASRVPEIYIRAGKMLGAKKMI 173 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F+ + P + ++ + +++ W ++V EM V GIG+ + + Sbjct: 174 LFFTVIFPAAFSHVIVGLRLALGVSWAYLVLGEMTGV------TKGIGAIMMDGRMLGHV 227 Query: 239 LAILYAMLTMLGVIFLYDQLL 259 +L M+ + D +L Sbjct: 228 DIVLACMVVIAITGKFCDWIL 248 >gi|256019540|ref|ZP_05433405.1| glycine betaine transporter membrane protein [Shigella sp. D9] gi|332280664|ref|ZP_08393077.1| glycine betaine/L-proline transport system permease proW [Shigella sp. D9] gi|332103016|gb|EGJ06362.1| glycine betaine/L-proline transport system permease proW [Shigella sp. D9] Length = 354 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|86747435|ref|YP_483931.1| binding-protein dependent transport system inner membrane protein [Rhodopseudomonas palustris HaA2] gi|86570463|gb|ABD05020.1| Binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris HaA2] Length = 277 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 10/185 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R+ + A + +P+GI +G + Q L + P+ V + + Sbjct: 87 SLGRIAGGLAWAIALGVPLGILVGRFRGMREASSVPFQFLRMISPLAWMPIAVMAFASW- 145 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 N + L+ W ILF+ G + +VA + W II+P I Sbjct: 146 ---NAAIVFLIGVAAIWPILFSTAHGFRRIDPAWFKVARNLGARPWHMLFTIIVPAIMQD 202 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G A G AW + +E T+GLG I ++ + + + V+I+ Sbjct: 203 SLAGIRLAVGVAWIVLVPAEFLG------VTSGLGYAINDARDTLEYDRLAATVVIIGLI 256 Query: 566 VLALN 570 AL+ Sbjct: 257 GFALD 261 Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 76/218 (34%), Gaps = 14/218 (6%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P+ + + L + A + R+ + ++ L + R + Sbjct: 63 APQPTFERLWQMLISGEAAKMAWPSLGRIAGGLAWAIALGVPLGILVGRFRGMREASSVP 122 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 ++ I L ++ V+ F + A +F I + +W + FS I Sbjct: 123 FQFLRMISPLAWMPIAVMAFASW--------NAAIVFLIGVAAIWPILFSTAHGFRRIDP 174 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 +V+R+ W + + VP M + + +++ W +V +E + V Sbjct: 175 AWFKVARNLGARPWHMLFTIIVPAIMQDSLAGIRLAVGVAWIVLVPAEFLGV------TS 228 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G I A + + ++ + + F D L R Sbjct: 229 GLGYAINDARDTLEYDRLAATVVIIGLIGFALDFLCER 266 >gi|271501462|ref|YP_003334488.1| binding-protein-dependent transporter inner membrane component [Dickeya dadantii Ech586] gi|270345017|gb|ACZ77782.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech586] Length = 286 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 108/274 (39%), Gaps = 23/274 (8%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI---GYIVNHFTYQDVL 377 +R H P + R+ + L + +F + G+ + + + ++ N T Sbjct: 21 APVRVHNPLMVPLRPVSMRLRWTLGVGFFVLFIGLWSLVTFSGVVSATFLANPLTMLHEG 80 Query: 378 YVIWL-------GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 +++ +T+ RVV ++A++I +P+GI +G + + +PF PA Sbjct: 81 VLLFTDYDFQQDIGMTVMRVVAGFLLAALIGVPLGILMGAYKLVEAFFEPFVSFCRYLPA 140 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + F PL++ + L++ G+ + I+ V D E A + + Sbjct: 141 SAFVPLLILWAGIGEMQK----ILVIFIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSS 196 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 +++PG P G AW IV+E+ ++G+G I +S Sbjct: 197 RSVVTRVLIPGAAPGIAELLRLVLGWAWTYVIVAELIG------ASSGIGHMIVDSQALL 250 Query: 551 SFPEVVLGVLIMCCFVLALNRFLW---HPLYLYG 581 + +++ G++++ L + L+ + Sbjct: 251 NTGQIIFGIIVIGVIGLLSDFLFKAVNRRLFAWS 284 Score = 93.8 bits (232), Expect = 7e-17, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 92/250 (36%), Gaps = 18/250 (7%) Query: 22 LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + F+ + ++ + P ++ + + Q T +R+++ +++ Sbjct: 49 FVLFIGLWSLVTFSGVVSATFLANPLTMLHEGVLLFTDYDFQQDIGMTVMRVVAGFLLAA 108 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 L L + + P + + +P F+ +++ E+ I Sbjct: 109 LIGVPLGILMGAYKLVEAFFEPFVSFCRYLPASAFVPLLILWAGIG--------EMQKIL 160 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF + + + S+ RDL E + + S + +P + PG+ + + + Sbjct: 161 VIFIGSFFQIVLMVAVSVGTARRDLVEAAYTLGCSSRSVVTRVLIPGAAPGIAELLRLVL 220 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258 W +V+ +E+I GIG I + + I++ ++ + + L D L Sbjct: 221 GWAWTYVIVAELIGASS------GIGHMIVDSQALLNTGQIIFGIIVIGVIGLLSDFLFK 274 Query: 259 -LFRPMIVWS 267 + R + WS Sbjct: 275 AVNRRLFAWS 284 >gi|317486678|ref|ZP_07945495.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316922061|gb|EFV43330.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 258 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 10/168 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 +M R+V ++A I IP+G+ +G + I P +++ P + P+ V + Sbjct: 67 SMMRIVGGFVLAQAIGIPLGLLLGASKAAHNLIYPVFEIMRPVPPLAWVPVAVI----FW 122 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 P + + + G + ++ N++ G + + A S + + +I+LPG P Sbjct: 123 PTPEMSMVFVTFLGAFFIVVINIVDGVRSIDARYLRAARSLGSSRSDMFWHILLPGSLPS 182 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 V G G W + +E+ + TGLG + G FP Sbjct: 183 IVVGMTVGMGVTWAVVVAAEMIA------SRTGLGYLTWSAYVAGEFP 224 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 87/223 (39%), Gaps = 15/223 (6%) Query: 18 NIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 I ++ F +V I L + I P ++ + L + +R++ Sbjct: 16 GIISIIVFTVVWEICTRLHVPIIGNVPAPSSVIGSMGKQLTDAFYWISWRDSMMRIVGGF 75 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 V++ L S+ ++ P+ +IM+ +P L ++ V+++ E+ Sbjct: 76 VLAQAIGIPLGLLLGASKAAHNLIYPVFEIMRPVPPLAWVPVAVIFW--------PTPEM 127 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + +F F + + ++ + +I +RS S FW++ +P S+P +V M Sbjct: 128 SMVFVTFLGAFFIVVINIVDGVRSIDARYLRAARSLGSSRSDMFWHILLPGSLPSIVVGM 187 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + M W VVA+EMI G+G A + Sbjct: 188 TVGMGVTWAVVVAAEMIA------SRTGLGYLTWSAYVAGEFP 224 >gi|329928157|ref|ZP_08282103.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328938034|gb|EGG34433.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length = 258 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 87/227 (38%), Gaps = 10/227 (4%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 W + I + + +I I+ +RV++ S++ IPVGI Sbjct: 21 VWHLLSLAYGPEILPGPVYTAKGGYELLTDGTLIQYIGISSYRVLLGWTFGSLLAIPVGI 80 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 IG I + +PF + P F L + + +L+++ T + ++ Sbjct: 81 MIGKVGPIRAFAEPFLNFIRFIPPIAFITLFLVWFGIGETSK----IMLILYATFFIVVL 136 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N + G + D A S + W+ ++++P P+ TG A G ++ A I +E+ Sbjct: 137 NTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVPFMFTGIRLAMGTSFMAIIGAEM 196 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + G+G I S + +G++ + +R + Sbjct: 197 IA------SNEGVGYLIWNSRLFFRTDWIFVGLICLGLMGFLTDRAV 237 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 88/228 (38%), Gaps = 14/228 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 + L +G + P L +L QY ++ R+L L + Sbjct: 24 LLSLAYGPEILPGPVYTAKGGYELLTDGTLIQYIGISSYRVLLGWTFGSLLAIPVGIMIG 83 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 K + P L+ ++ IP + F+T +V+F E + I I + + + Sbjct: 84 KVGPIRAFAEPFLNFIRFIPPIAFITLFLVWFGIG--------ETSKIMLILYATFFIVV 135 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ D +RS S WQ ++ +P ++P + + ++M + ++ +E Sbjct: 136 LNTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVPFMFTGIRLAMGTSFMAIIGAE 195 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 MI + G+G I + I ++ + + FL D+ + Sbjct: 196 MIASNE------GVGYLIWNSRLFFRTDWIFVGLICLGLMGFLTDRAV 237 >gi|302557597|ref|ZP_07309939.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000] gi|302475215|gb|EFL38308.1| ABC transporter, permease [Streptomyces griseoflavus Tu4000] Length = 304 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 98/260 (37%), Gaps = 12/260 (4%) Query: 14 RIFPNIFDLLAFVLVIGIINI--LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 +I P + + + V + ++ + P + D+ L Y + R Sbjct: 49 KILPPVIAVALVLAVWQALVSFRIVDDPSKLPAPGAVWDVAQRAWLQGELLGYIWTSVSR 108 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 L +LL L A+ + + + PIL +QS+P + ++ V++ Sbjct: 109 GLLGFFFALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPPAVIWLGLNNQMMY 168 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 I V ++ + + +P R+ +G + W++ +P ++PG Sbjct: 169 A--------VILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWHIVLPAALPG 220 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 V + + W ++A+E+I G+G + D+ + A+L +L V Sbjct: 221 YVAGLKQGWAFSWRSLMAAEIIA--SFPDLGVGLGQLLENGRNASDMAMVFEAILLILTV 278 Query: 252 IFLYDQLLFRPMIVWSNKFR 271 D L+F P+ W + R Sbjct: 279 GIAIDLLIFSPLERWVLRSR 298 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 6/207 (2%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ R ++ A +I P+G+ + + + I P L + P+ + P Sbjct: 96 GELLGYIWTSVSRGLLGFFFALLIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPP 155 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + N + +++ G I +++G P F + TG + + Sbjct: 156 AVIWLGL----NNQMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTLGATGLKGTWH 211 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP P YV G +W + + +E+ + GLG + V Sbjct: 212 IVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNASDMAMVF 269 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583 +L++ +A++ ++ PL + R Sbjct: 270 EAILLILTVGIAIDLLIFSPLERWVLR 296 >gi|256112111|ref|ZP_05453047.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis bv. 3 str. Ether] gi|265993550|ref|ZP_06106107.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|262764420|gb|EEZ10452.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] Length = 246 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 82/234 (35%), Gaps = 10/234 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +S+ + I + ++ + + + T ++ ++ RV+ ++ Sbjct: 13 LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVG +G+ S I+P+ Q P PL + + ++ Sbjct: 73 LAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + G + A + +I+P P+ + G G AW Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ + +GLG + ++ P + + ++ + L ++R L Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLL 236 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 87/232 (37%), Gaps = 14/232 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + G + G P D+++ L L + R+LS V+ + Sbjct: 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L R ++ P + + IP L + +V E IF IF + Sbjct: 79 FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + YQ + ++ R L +R F + VP S+P ++ + + + W V Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 VA+E+I G+G + A DL I +++T+ + D+LL Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLL 236 >gi|157159883|ref|YP_001457201.1| taurine transporter subunit [Escherichia coli HS] gi|157065563|gb|ABV04818.1| taurine uptake ABC transporter, permease protein [Escherichia coli HS] Length = 275 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPSQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWTVAALQLISPLFLPPSQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|24111695|ref|NP_706205.1| taurine transporter subunit [Shigella flexneri 2a str. 301] gi|30061820|ref|NP_835991.1| taurine transporter subunit [Shigella flexneri 2a str. 2457T] gi|110804390|ref|YP_687910.1| taurine transporter subunit [Shigella flexneri 5 str. 8401] gi|157157564|ref|YP_001461542.1| taurine transporter subunit [Escherichia coli E24377A] gi|191166752|ref|ZP_03028579.1| taurine uptake ABC transporter, permease protein [Escherichia coli B7A] gi|193065230|ref|ZP_03046303.1| taurine uptake ABC transporter, permease protein [Escherichia coli E22] gi|193068646|ref|ZP_03049607.1| taurine uptake ABC transporter, permease protein [Escherichia coli E110019] gi|209917580|ref|YP_002291664.1| taurine transporter subunit [Escherichia coli SE11] gi|218552930|ref|YP_002385843.1| taurine transporter subunit [Escherichia coli IAI1] gi|256020340|ref|ZP_05434205.1| taurine transporter subunit [Shigella sp. D9] gi|260842571|ref|YP_003220349.1| taurine transporter subunit TauC [Escherichia coli O103:H2 str. 12009] gi|260853593|ref|YP_003227484.1| taurine transporter subunit TauC [Escherichia coli O26:H11 str. 11368] gi|300818312|ref|ZP_07098523.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300820398|ref|ZP_07100550.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|307312253|ref|ZP_07591889.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|309794911|ref|ZP_07689332.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|312970457|ref|ZP_07784638.1| taurine transport system permease protein tauC [Escherichia coli 1827-70] gi|331666715|ref|ZP_08367589.1| taurine transport system permease protein TauC [Escherichia coli TA271] gi|331676031|ref|ZP_08376743.1| taurine transport system permease protein TauC [Escherichia coli H591] gi|332281511|ref|ZP_08393924.1| taurine uptake ABC transporter [Shigella sp. D9] gi|24050472|gb|AAN41912.1| taurine transport system permease protein [Shigella flexneri 2a str. 301] gi|30040062|gb|AAP15796.1| taurine transport system permease protein [Shigella flexneri 2a str. 2457T] gi|110613938|gb|ABF02605.1| taurine transport system permease protein [Shigella flexneri 5 str. 8401] gi|157079594|gb|ABV19302.1| taurine uptake ABC transporter, permease protein [Escherichia coli E24377A] gi|190903263|gb|EDV62985.1| taurine uptake ABC transporter, permease protein [Escherichia coli B7A] gi|192927204|gb|EDV81825.1| taurine uptake ABC transporter, permease protein [Escherichia coli E22] gi|192958009|gb|EDV88451.1| taurine uptake ABC transporter, permease protein [Escherichia coli E110019] gi|209910839|dbj|BAG75913.1| taurine ABC transporter permease component [Escherichia coli SE11] gi|218359698|emb|CAQ97239.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|257752242|dbj|BAI23744.1| taurine transporter subunit TauC [Escherichia coli O26:H11 str. 11368] gi|257757718|dbj|BAI29215.1| taurine transporter subunit TauC [Escherichia coli O103:H2 str. 12009] gi|281599613|gb|ADA72597.1| Taurine transport system permease protein [Shigella flexneri 2002017] gi|300527183|gb|EFK48252.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300529203|gb|EFK50265.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|306907755|gb|EFN38257.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli W] gi|308121564|gb|EFO58826.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|310337106|gb|EFQ02244.1| taurine transport system permease protein tauC [Escherichia coli 1827-70] gi|313646668|gb|EFS11127.1| taurine transport system permease protein tauC [Shigella flexneri 2a str. 2457T] gi|315059650|gb|ADT73977.1| taurine transporter subunit [Escherichia coli W] gi|323152103|gb|EFZ38397.1| taurine transport system permease protein tauC [Escherichia coli EPECa14] gi|323171143|gb|EFZ56792.1| taurine transport system permease protein tauC [Escherichia coli LT-68] gi|323184807|gb|EFZ70178.1| taurine transport system permease protein tauC [Escherichia coli 1357] gi|323379786|gb|ADX52054.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli KO11] gi|324016636|gb|EGB85855.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324116853|gb|EGC10766.1| inner membrane transport system [Escherichia coli E1167] gi|331065939|gb|EGI37823.1| taurine transport system permease protein TauC [Escherichia coli TA271] gi|331076089|gb|EGI47371.1| taurine transport system permease protein TauC [Escherichia coli H591] gi|332103863|gb|EGJ07209.1| taurine uptake ABC transporter [Shigella sp. D9] gi|332761613|gb|EGJ91893.1| taurine transport system permease protein tauC [Shigella flexneri 4343-70] gi|332764415|gb|EGJ94648.1| taurine transport system permease protein tauC [Shigella flexneri K-671] gi|333008725|gb|EGK28189.1| taurine transport system permease protein tauC [Shigella flexneri K-218] gi|333022109|gb|EGK41352.1| taurine transport system permease protein tauC [Shigella flexneri K-304] Length = 275 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 104 bits (260), Expect = 5e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|325964279|ref|YP_004242185.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease [Arthrobacter phenanthrenivorans Sphe3] gi|323470366|gb|ADX74051.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Arthrobacter phenanthrenivorans Sphe3] Length = 315 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 91/221 (41%), Gaps = 10/221 (4%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P D+ + + + L + + R L VIS+ L A+ L P Sbjct: 89 PGPLDVATQMGVLWNEGKLQEAVWTSLQRGLVGFVISVTIATPVGLLLAQVAPLRRAFGP 148 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 ++ +Q +P + ++ +++F + F IF + ++ + + IP Sbjct: 149 LISGLQVLPSVAWVPAAIIWFGL--------TDATVYFVIFMGAIPSIINGLISGVDQIP 200 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 V S + + +P ++PG + + + W ++A+E+I VG T+ Sbjct: 201 PQYRRVGTVLGASRLEMALQIILPAALPGYLGGLKQGWAFSWRSLMAAEIIAVGGTIG-- 258 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPM 263 G+GS + D+ ++ A+L +L V L + L+F P+ Sbjct: 259 FGLGSLLDQGRILSDMTVVMSAILLILAVGILIELLVFAPI 299 Score = 111 bits (278), Expect = 4e-22, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 73/192 (38%), Gaps = 6/192 (3%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R +V +I+ I PVG+ + + P L P+ + P + Sbjct: 114 SLQRGLVGFVISVTIATPVGLLLAQVAPLRRAFGPLISGLQVLPSVAWVPAAIIWFGLTD 173 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + ++ G I+ +I+G P ++ V + + IILP P Sbjct: 174 AT----VYFVIFMGAIPSIINGLISGVDQIPPQYRRVGTVLGASRLEMALQIILPAALPG 229 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 Y+ G +W + + +E+ + G GLG+ + + V+ +L++ Sbjct: 230 YLGGLKQGWAFSWRSLMAAEIIAVGGTI--GFGLGSLLDQGRILSDMTVVMSAILLILAV 287 Query: 566 VLALNRFLWHPL 577 + + ++ P+ Sbjct: 288 GILIELLVFAPI 299 >gi|301065292|ref|YP_003787315.1| taurine transport system permease tauC [Lactobacillus casei str. Zhang] gi|300437699|gb|ADK17465.1| taurine transport system permease protein tauC [Lactobacillus casei str. Zhang] Length = 260 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T+ RV V + A I+ IP+G++ + I S I P Q L P ++ L++ + Sbjct: 67 LLTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLILWLGI 126 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ I S +++ A+S W+ + +I P Sbjct: 127 GEASK----VLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFLRVIFPASL 182 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG +A G A+ + +E+ + T+G+G + +++ +++ +++M Sbjct: 183 PAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVMIVDIVVMG 236 Query: 564 CFVLALNRFL 573 + L+ FL Sbjct: 237 ITGMLLDWFL 246 Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 Q+ T R+ A+ +++ ++ + +G ++ PI+ ++ IP L + T ++ Sbjct: 63 WQHYLLTLTRVGVAVSSAIIVGIPLGLFSSYNTTIGSLIDPIIQFLRPIPPLAYYTLLIL 122 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + E + + +F S + + + Y ++ I + + S + WQ F Sbjct: 123 WLGIG--------EASKVLLLFLSALPPIYLAAYDAVSGINIEYRNNAASLGANYWQIFL 174 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + P S+P ++ + ++ + +V++EMI GIG + A + Sbjct: 175 RVIFPASLPAIMTGVRSAVGMAYTTIVSAEMIA------STSGIGWMVIDASHYLKTDVM 228 Query: 242 LYAMLTMLGVIFLYDQLL 259 + ++ M L D L Sbjct: 229 IVDIVVMGITGMLLDWFL 246 >gi|300790728|ref|YP_003771019.1| sulfonate/nitrate/taurine ABC transporter permease [Amycolatopsis mediterranei U32] gi|299800242|gb|ADJ50617.1| permease component of ABC-type sulfonate/nitrate/taurine transport system [Amycolatopsis mediterranei U32] Length = 316 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 93/271 (34%), Gaps = 13/271 (4%) Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC---GVAIGIAWQ 362 +SPL + P + + +S+ + + V+ V Sbjct: 44 WSPLPRRAGLKPSASPLFSLRAPISAASRWTLAVLSFAVPFLAWVVLSVSGAVDATFLPS 103 Query: 363 SIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 + + T RV+ +A ++ +P+GI +G + +P Sbjct: 104 PAAVLKAGIDMASTGELFDDLWTTTQRVLEGFGLAVLVSVPLGILMGSFTAGQAFFEPLI 163 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 LL PA+ F PL++ + + ++ GT ++ PN +V Sbjct: 164 GLLRYLPASAFIPLLIIWLGLGEPSK----IAILFIGTVFFNTLMTADVVRGVPNSLIDV 219 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + + R I++P P + AWN +V+E+ + + GLG Sbjct: 220 SYTLGARRGEVLRKIVVPHSLPGMIDAIRVNAAAAWNFVVVAELIN------SSAGLGYR 273 Query: 543 IAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 I + ++ ++++ LA++ L Sbjct: 274 IVRAQRFLQTDKIFAVLVVIGIAGLAIDVLL 304 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 87/248 (35%), Gaps = 20/248 (8%) Query: 18 NIFDLLAFVLVIGIINILLHGIQE------TTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 + + L + + ++ + P ++ L TT R Sbjct: 71 SRWTLAVLSFAVPFLAWVVLSVSGAVDATFLPSPAAVLKAGIDMASTGELFDDLWTTTQR 130 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L +++L + L P++ +++ +P F+ +++ P K Sbjct: 131 VLEGFGLAVLVSVPLGILMGSFTAGQAFFEPLIGLLRYLPASAFIPLLIIWLGLGEPSK- 189 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 I +F V+ T + +P L +VS + + + VP S+PG Sbjct: 190 -------IAILFIGTVFFNTLMTADVVRGVPNSLIDVSYTLGARRGEVLRKIVVPHSLPG 242 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 ++ + ++ + W FVV +E+I G+G I A + I ++ + Sbjct: 243 MIDAIRVNAAAAWNFVVVAELINSSA------GLGYRIVRAQRFLQTDKIFAVLVVIGIA 296 Query: 252 IFLYDQLL 259 D LL Sbjct: 297 GLAIDVLL 304 >gi|222055582|ref|YP_002537944.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] gi|221564871|gb|ACM20843.1| binding-protein-dependent transport systems inner membrane component [Geobacter sp. FRC-32] Length = 263 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 13/247 (5%) Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQ--DVLYVIWLGCITM 387 N+ + + W V + + + +V ++ + ++ +++ Sbjct: 11 WSWSSWFNRSSVLIFFVAWELVPRAGGLLETFIAPPSVVLKTLWEILNSGELLGHVGVSL 70 Query: 388 FRVVVLIIIASIIWIPVGIWIGFR-PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 R + AS++ IP+G +G + I P + L FPL + L Sbjct: 71 SRTASGFLAASLVAIPLGFLLGGSFRTLERLINPVLRFLGQLNPFSLFPLFIMLFGIGEL 130 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + ++ + W ILFN I G + A S + +ILP P Sbjct: 131 SKGA----MIFWVCIWPILFNTINGVKEIDPLLIKSARSMGTGIVTLFFKVILPAAAPGI 186 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G G A+ I +E+ + GLG + + P++ + + Sbjct: 187 FLGLKMGSGTAFFMLIAAEMIG------ASRGLGWLVWNAQINFQIPQLFAATVTISVLG 240 Query: 567 LALNRFL 573 LALN Sbjct: 241 LALNGIF 247 Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 97/271 (35%), Gaps = 19/271 (7%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPIT-LDVH 59 M+ P S + N +L F + ++ ++ P +V L+ Sbjct: 1 MWKNTEKPSLWSWSSWFNRSSVLIFFVAWELVPRAGGLLETFIAPPSVVLKTLWEILNSG 60 Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTF 118 L + + R S + + L L S R L ++ P+L + + Sbjct: 61 ELLGHVGVSLSRTASGFLAASLVAIPLGFLLGGSFRTLERLINPVLRFLGQLNPFSLFPL 120 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 ++ F EL+ IF +W + F+ + I L + +RS Sbjct: 121 FIMLFGIG--------ELSKGAMIFWVCIWPILFNTINGVKEIDPLLIKSARSMGTGIVT 172 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F+ + +P + PG+ + M +F ++A+EMI G+G + A + Sbjct: 173 LFFKVILPAAAPGIFLGLKMGSGTAFFMLIAAEMIGAS------RGLGWLVWNAQINFQI 226 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 + A +T+ + + ++ R ++ W Sbjct: 227 PQLFAATVTISVLGLALNGIFAIIERALLGW 257 >gi|15800097|ref|NP_286109.1| taurine transporter subunit [Escherichia coli O157:H7 EDL933] gi|15829675|ref|NP_308448.1| taurine transporter subunit [Escherichia coli O157:H7 str. Sakai] gi|168749817|ref|ZP_02774839.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168756896|ref|ZP_02781903.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168761559|ref|ZP_02786566.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168768305|ref|ZP_02793312.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168776340|ref|ZP_02801347.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168783220|ref|ZP_02808227.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168786200|ref|ZP_02811207.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168800237|ref|ZP_02825244.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|195938570|ref|ZP_03083952.1| taurine transporter subunit [Escherichia coli O157:H7 str. EC4024] gi|208806945|ref|ZP_03249282.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208815515|ref|ZP_03256694.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208823125|ref|ZP_03263443.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209398897|ref|YP_002269008.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|218703651|ref|YP_002411170.1| taurine transporter subunit [Escherichia coli UMN026] gi|254791547|ref|YP_003076384.1| taurine transporter subunit [Escherichia coli O157:H7 str. TW14359] gi|261223846|ref|ZP_05938127.1| taurine transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256054|ref|ZP_05948587.1| taurine transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291281274|ref|YP_003498092.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease [Escherichia coli O55:H7 str. CB9615] gi|293403487|ref|ZP_06647578.1| taurine transporter subunit [Escherichia coli FVEC1412] gi|298379098|ref|ZP_06988979.1| taurine transporter subunit [Escherichia coli FVEC1302] gi|300900424|ref|ZP_07118594.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|12513208|gb|AAG54717.1|AE005216_5 taurine transport system permease protein [Escherichia coli O157:H7 str. EDL933] gi|13359878|dbj|BAB33844.1| taurine transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|187768289|gb|EDU32133.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188015903|gb|EDU54025.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188999409|gb|EDU68395.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189355970|gb|EDU74389.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189362454|gb|EDU80873.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189368092|gb|EDU86508.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189373670|gb|EDU92086.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189377398|gb|EDU95814.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|208726746|gb|EDZ76347.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208732163|gb|EDZ80851.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208737318|gb|EDZ85002.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209160297|gb|ACI37730.1| taurine uptake ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209744494|gb|ACI70554.1| taurine transport system permease protein [Escherichia coli] gi|209744496|gb|ACI70555.1| taurine transport system permease protein [Escherichia coli] gi|209744498|gb|ACI70556.1| taurine transport system permease protein [Escherichia coli] gi|209744500|gb|ACI70557.1| taurine transport system permease protein [Escherichia coli] gi|209744502|gb|ACI70558.1| taurine transport system permease protein [Escherichia coli] gi|218430748|emb|CAR11622.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|254590947|gb|ACT70308.1| taurine transporter subunit, membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|284920175|emb|CBG33234.1| taurine ABC transporter, permease protein [Escherichia coli 042] gi|290761147|gb|ADD55108.1| ABC-type nitrate/sulfonate/bicarbonate transpo rt system, permease component [Escherichia coli O55:H7 str. CB9615] gi|291429340|gb|EFF02360.1| taurine transporter subunit [Escherichia coli FVEC1412] gi|298280211|gb|EFI21715.1| taurine transporter subunit [Escherichia coli FVEC1302] gi|300356070|gb|EFJ71940.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|320192777|gb|EFW67417.1| Taurine transport system permease protein TauC [Escherichia coli O157:H7 str. EC1212] gi|320638358|gb|EFX08072.1| taurine transporter subunit [Escherichia coli O157:H7 str. G5101] gi|320643739|gb|EFX12862.1| taurine transporter subunit [Escherichia coli O157:H- str. 493-89] gi|320649089|gb|EFX17667.1| taurine transporter subunit [Escherichia coli O157:H- str. H 2687] gi|320655982|gb|EFX23898.1| taurine transporter subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662539|gb|EFX29928.1| taurine transporter subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320665109|gb|EFX32202.1| taurine transporter subunit [Escherichia coli O157:H7 str. LSU-61] gi|326341125|gb|EGD64917.1| Taurine transport system permease protein TauC [Escherichia coli O157:H7 str. 1044] gi|326346100|gb|EGD69839.1| Taurine transport system permease protein TauC [Escherichia coli O157:H7 str. 1125] Length = 275 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L PI+++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|242239080|ref|YP_002987261.1| binding-protein-dependent transporters inner membrane component [Dickeya dadantii Ech703] gi|242131137|gb|ACS85439.1| binding-protein-dependent transport systems inner membrane component [Dickeya dadantii Ech703] Length = 263 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 91/216 (42%), Gaps = 17/216 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L Q+ S +T R L+ I + SR +L + +++++P L + Sbjct: 56 GELWQHLSISTWRALTGFAIGGALGLTLGFITGLSRTGERLLDTSIQMLRNVPHLALIPL 115 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 +++F E A IF + ++ + + Y + +I L E++RS+ LSG++ Sbjct: 116 VILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRHIDSGLLEMARSYGLSGFR 167 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P ++ + S+ W ++ +E I GIG A + Sbjct: 168 LFREVLLPGALPSIMVGVRFSLGLMWLTLIVAETISANA------GIGYLAMNAREFLQT 221 Query: 239 LAILYAMLTMLGVIFLYDQL---LFRPMIVWSNKFR 271 ++ A++ + L D + L R + W ++ Sbjct: 222 NVVVVAIILYALLGKLADVIALALERIWLRWHPSWQ 257 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 10/188 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 I+ +R + I + + +G G + Q+L P PLV+ Sbjct: 64 ISTWRALTGFAIGGALGLTLGFITGLSRTGERLLDTSIQMLRNVPHLALIPLVILWFGI- 122 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 L+ GT + I N G + E+A S+ ++G+R +R ++LPG P Sbjct: 123 ---DESAKIFLVALGTLFPIYLNTYHGIRHIDSGLLEMARSYGLSGFRLFREVLLPGALP 179 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + G + G W IV+E S G+G + E VV+ +++ Sbjct: 180 SIMVGVRFSLGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTNVVVVAIILYAL 233 Query: 565 FVLALNRF 572 + Sbjct: 234 LGKLADVI 241 >gi|116749077|ref|YP_845764.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] gi|116698141|gb|ABK17329.1| binding-protein-dependent transport systems inner membrane component [Syntrophobacter fumaroxidans MPOB] Length = 231 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 107/245 (43%), Gaps = 14/245 (5%) Query: 31 IINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLA 90 ++ L G + + I+ + L +Y + R+ +++L L Sbjct: 1 MVGSLWSGTEHLPGIQQILAAFWELANNGVLLRYTVASLFRVTVGFYLAVLLAVPLGLLL 60 Query: 91 AKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNM 150 + + P++ ++ I L ++ F +++F + A+F IF + + M Sbjct: 61 GRQALIHQCTNPVIQFLRPISPLAWIPFAMLWFGIG--------DKPALFIIFIASFFPM 112 Query: 151 TFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVAS 210 S ++ +I +V+ + + S W+ +Y+ +P +PG+V + +++ W VVA+ Sbjct: 113 LISTVKAAASIHPMYFQVAANLQFSVWESVYYVILPACLPGIVLALRVTLGVSWMVVVAA 172 Query: 211 EMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKF 270 EMI V G+G I A L ++ AM+T+ + L D + + + + ++ Sbjct: 173 EMIAVKS------GLGYLIIDARNALRLDYVVVAMITIGVIGLLLDYFMTKLEGMEAVRW 226 Query: 271 RLERT 275 RLE+ Sbjct: 227 RLEQK 231 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 80/201 (39%), Gaps = 10/201 (4%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + ++ ++FRV V +A ++ +P+G+ +G + I P Q L Sbjct: 25 LANNGVLLRYTVASLFRVTVGFYLAVLLAVPLGLLLGRQALIHQCTNPVIQFLRPISPLA 84 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + P + ++ + + +L + + A++ + +VA++ + W Sbjct: 85 WIPFAMLWFGIGDK----PALFIIFIASFFPMLISTVKAAASIHPMYFQVAANLQFSVWE 140 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 Y+ILP P V G +W + +E+ + +GLG I ++ Sbjct: 141 SVYYVILPACLPGIVLALRVTLGVSWMVVVAAEMIA------VKSGLGYLIIDARNALRL 194 Query: 553 PEVVLGVLIMCCFVLALNRFL 573 VV+ ++ + L L+ F+ Sbjct: 195 DYVVVAMITIGVIGLLLDYFM 215 >gi|24113982|ref|NP_708492.1| glycine betaine transporter membrane protein [Shigella flexneri 2a str. 301] gi|30064045|ref|NP_838216.1| glycine betaine transporter membrane protein [Shigella flexneri 2a str. 2457T] gi|110806689|ref|YP_690209.1| glycine betaine transporter membrane protein [Shigella flexneri 5 str. 8401] gi|24053095|gb|AAN44199.1| glycine betaine/L-proline transport system permease protein [Shigella flexneri 2a str. 301] gi|30042301|gb|AAP18026.1| glycine betaine/L-proline transport system permease protein [Shigella flexneri 2a str. 2457T] gi|110616237|gb|ABF04904.1| high-affinity transport system for glycine betaine and proline [Shigella flexneri 5 str. 8401] gi|281602054|gb|ADA75038.1| putative ABC-type proline/glycine betaine transport system, permease component [Shigella flexneri 2002017] gi|313648328|gb|EFS12772.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri 2a str. 2457T] gi|332753396|gb|EGJ83776.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri 4343-70] gi|332753903|gb|EGJ84278.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-671] gi|332755699|gb|EGJ86062.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri 2747-71] gi|332765628|gb|EGJ95841.1| binding--dependent transport system inner membrane component family protein [Shigella flexneri 2930-71] gi|333000638|gb|EGK20215.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-218] gi|333015889|gb|EGK35225.1| glycine betaine/L-proline transport system permease protein proW [Shigella flexneri K-304] Length = 354 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALITWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 F QL + +F +G+ ++ ++ + + V Sbjct: 97 FQQLLLGMPAPVAIIVFALITWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLAL----V 152 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + ++ +I +P+GIW+ P + I+P + PA V+ +V N+ Sbjct: 153 LTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NV 208 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 ++ I I+ I G + P D E + SF + + + LP P + G Sbjct: 209 PGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGV 268 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A + +++ + + G GLG + + +G + + + L+ Sbjct: 269 NQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILD 321 Query: 571 RF 572 R Sbjct: 322 RL 323 >gi|16128352|ref|NP_414901.1| taurine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89107238|ref|AP_001018.1| taurine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170079956|ref|YP_001729276.1| taurine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|238899660|ref|YP_002925456.1| taurine transporter subunit [Escherichia coli BW2952] gi|256024012|ref|ZP_05437877.1| taurine transporter subunit [Escherichia sp. 4_1_40B] gi|300947989|ref|ZP_07162133.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300957922|ref|ZP_07170092.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|301025816|ref|ZP_07189323.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301647281|ref|ZP_07247098.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|307137011|ref|ZP_07496367.1| taurine transporter subunit [Escherichia coli H736] gi|331640882|ref|ZP_08342017.1| taurine transport system permease protein TauC [Escherichia coli H736] gi|34396000|sp|Q47539|TAUC_ECOLI RecName: Full=Taurine transport system permease protein tauC gi|1657562|gb|AAB18090.1| membrane component [Escherichia coli str. K-12 substr. MG1655] gi|1786564|gb|AAC73470.1| taurine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85674508|dbj|BAE76148.1| taurine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169887791|gb|ACB01498.1| taurine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|238863626|gb|ACR65624.1| taurine transporter subunit [Escherichia coli BW2952] gi|260450443|gb|ACX40865.1| binding-protein-dependent transport systems inner membrane component [Escherichia coli DH1] gi|299879958|gb|EFI88169.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300315386|gb|EFJ65170.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300452453|gb|EFK16073.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|301074569|gb|EFK89375.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|315135051|dbj|BAJ42210.1| taurine transporter subunit [Escherichia coli DH1] gi|315616702|gb|EFU97319.1| taurine transport system permease protein tauC [Escherichia coli 3431] gi|323943176|gb|EGB39332.1| inner membrane transport system [Escherichia coli E482] gi|331037680|gb|EGI09900.1| taurine transport system permease protein TauC [Escherichia coli H736] Length = 275 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+++ + A + IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 104/253 (41%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77 + + + + L P+ +++ + P +L Q+ + + R++ A+ Sbjct: 33 VLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIMLALF 92 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++LF S + +L PI+++ + +P L +L V++F E + Sbjct: 93 AAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 144 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + + S + ++ + ++S S Q W++ +P ++P ++ + Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 + + GW +VA+E+I G+G + A + +L + + + FL + Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258 Query: 257 --QLLFRPMIVWS 267 + L R + W Sbjct: 259 GLRALQRRLTPWH 271 >gi|332761727|gb|EGJ92006.1| taurine transport system permease protein tauC [Shigella flexneri 2747-71] gi|332768548|gb|EGJ98730.1| binding--dependent transport system inner membrane component family protein [Shigella flexneri 2930-71] Length = 273 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 10 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 69 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 70 MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 129 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 130 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 185 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 186 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 239 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 240 VLAGIAVIAIIAFLLELGLRALQRRLTPW 268 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 35 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 94 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 95 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 146 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 147 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 206 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 207 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 260 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 261 LQRRLTPWH 269 >gi|301025486|ref|ZP_07189033.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300396001|gb|EFJ79539.1| ABC transporter, permease protein [Escherichia coli MS 69-1] Length = 275 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAILLTVWWAVAALHLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 103 bits (258), Expect = 7e-20, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 102/253 (40%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77 + + + + L P+ ++ + P +L Q+ + + R++ A++ Sbjct: 33 ILLTVWWAVAALHLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALL 92 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++L S + +L P++++ + +P L +L V++F E + Sbjct: 93 AAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETS 144 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + + S + + + ++S S Q W++ +P ++P ++ + Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 + + GW +VA+E+I G+G + A + +L + + + FL + Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258 Query: 257 --QLLFRPMIVWS 267 + L R + W Sbjct: 259 GLRALQRRLTPWH 271 >gi|302327398|gb|ADL26599.1| ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 250 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 10/196 (5%) Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ ++ ++V A+++ I +GI G P + + ++P ++ A P NV+ P Sbjct: 51 ELLRSAWSSLLKLVPAYFAAAVVGISLGIVSGSVPWVGTMLKPISRFAAPIPPNVYIPYA 110 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 ++ + ++L+ + ++ W I N AGA+ P ++ A+ I + + I Sbjct: 111 IAILPTFYLS----STFIIFIAAFWPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRI 166 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 P +G G ++ V+E+ TGLG ++ + +P +V Sbjct: 167 AFVASLPSIFSGLSVGMGLSFIMLTVAELFG------ENTGLGHFVQFYADYSDYPNMVA 220 Query: 558 GVLIMCCFVLALNRFL 573 G+L VLA+ F Sbjct: 221 GILWTGIVVLAIMEFF 236 Score = 93.8 bits (232), Expect = 7e-17, Method: Composition-based stats. Identities = 30/228 (13%), Positives = 76/228 (33%), Gaps = 14/228 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + I+ + P + + L + A + L+++ A + + Sbjct: 19 IWTFISSGPEWSSQYLFPSPKAVLTALFNSREELLRSAWSSLLKLVPAYFAAAVVGISLG 78 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 ++ +G +L PI IP ++ + + Y L++ F IF + Sbjct: 79 IVSGSVPWVGTMLKPISRFAAPIPPNVYIPYAIAILPTFY--------LSSTFIIFIAAF 130 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + + +IP + + ++ W + S+P + + + M + + Sbjct: 131 WPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRIAFVASLPSIFSGLSVGMGLSFIML 190 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 +E+ G+G ++ D ++ +L V+ Sbjct: 191 TVAELFGENT------GLGHFVQFYADYSDYPNMVAGILWTGIVVLAI 232 >gi|150005778|ref|YP_001300522.1| glycine betaine/L-proline transport system permease [Bacteroides vulgatus ATCC 8482] gi|294776156|ref|ZP_06741645.1| ABC transporter, permease protein [Bacteroides vulgatus PC510] gi|149934202|gb|ABR40900.1| glycine betaine/L-proline transport system permease [Bacteroides vulgatus ATCC 8482] gi|294449979|gb|EFG18490.1| ABC transporter, permease protein [Bacteroides vulgatus PC510] Length = 274 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L+ + I + + ++ I I+ + L +T +LS+ +I+L Sbjct: 41 LMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + +A S+R +L PILD+MQ++P +L V++F G V GA IF Sbjct: 101 IMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + Q + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTSLGIKQVPKNVVEASRSFGATPMQLLFKVQLPLALPTIMTGINQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 LMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 81.1 bits (199), Expect = 5e-13, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L F V + +AW G V+ FT +L + +G T+ V+ IIA Sbjct: 40 ILMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 I+ +P+GIW + P L+ PA V+ V + + Sbjct: 100 LIMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G P + E + SF T + + LP P +TG + Sbjct: 158 --AMPPVVRLTSLGIKQVPKNVVEASRSFGATPMQLLFKVQLPLALPTIMTGINQTILMS 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + + G + + + L+R Sbjct: 216 LSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|296118044|ref|ZP_06836626.1| sulfonate ABC transporter, permease protein SsuC [Corynebacterium ammoniagenes DSM 20306] gi|295968930|gb|EFG82173.1| sulfonate ABC transporter, permease protein SsuC [Corynebacterium ammoniagenes DSM 20306] Length = 273 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 69/192 (35%), Gaps = 10/192 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 + RV+ +I + I +G+ +G + + P Q L A P PL + Sbjct: 81 ATSGQRVITGFLIGVVAGIGLGLLVGMSSLFDAALDPLLQALRALPHLGLVPLFIIWFGI 140 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L LL+ G + + N +G E A + + R +I+PG Sbjct: 141 GEL----PKVLLIALGVLFPLYLNTASGFRQADPKLLETARVLGFSFSQRVRKVIVPGAA 196 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P G A AW IV+E + + GLG I + + V+ G++I Sbjct: 197 PALFVGLRQASASAWLTLIVAEQVN------ASQGLGFMINNARDFYRTDVVIFGLIIYA 250 Query: 564 CFVLALNRFLWH 575 L + + Sbjct: 251 TLGLLTDALIRR 262 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 96/254 (37%), Gaps = 15/254 (5%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 F + RI I + VL+ +++++ L + P I+ L +L + Sbjct: 23 SFKAPRISGRIISPIIAVLLWQLLSVVGLLPERILPAPTAIITAGWEVLTDGTLAIALAT 82 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+++ +I ++ L S L P+L ++++P LG + +++F Sbjct: 83 SGQRVITGFLIGVVAGIGLGLLVGMSSLFDAALDPLLQALRALPHLGLVPLFIIWFGIG- 141 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 EL + I ++ + + L E +R S Q+ + VP Sbjct: 142 -------ELPKVLLIALGVLFPLYLNTASGFRQADPKLLETARVLGFSFSQRVRKVIVPG 194 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + P L + + + W ++ +E + G+G I A +++ ++ Sbjct: 195 AAPALFVGLRQASASAWLTLIVAEQVNASQ------GLGFMINNARDFYRTDVVIFGLII 248 Query: 248 MLGVIFLYDQLLFR 261 + L D L+ R Sbjct: 249 YATLGLLTDALIRR 262 >gi|261407407|ref|YP_003243648.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] gi|261283870|gb|ACX65841.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. Y412MC10] Length = 258 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 10/227 (4%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGI 406 W + I + + +I I+ +RV++ S++ IPVGI Sbjct: 21 VWHLLSLAYGPEILPGPVYTAKGGYELLTDGTLIQYIGISSYRVLLGWTFGSLLAIPVGI 80 Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 IG I +PF + P F L + + +L+++ T + ++ Sbjct: 81 MIGKVGPIRVFAEPFLNFIRFIPPIAFITLFLVWFGIGETSK----IMLILYATFFIVVL 136 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N + G + D A S + W+ ++++P P+ TG A G ++ A I +E+ Sbjct: 137 NTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVPFMFTGIRLAMGTSFMAIIGAEM 196 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + G+G I S + +G++ + +R + Sbjct: 197 IA------SNEGVGYLIWNSRLFFRTDWIFVGLICLGLMGFLTDRAV 237 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 89/228 (39%), Gaps = 14/228 (6%) Query: 32 INILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAA 91 + L +G + P L +L QY ++ R+L L + Sbjct: 24 LLSLAYGPEILPGPVYTAKGGYELLTDGTLIQYIGISSYRVLLGWTFGSLLAIPVGIMIG 83 Query: 92 KSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMT 151 K + + P L+ ++ IP + F+T +V+F E + I I + + + Sbjct: 84 KVGPIRVFAEPFLNFIRFIPPIAFITLFLVWFGIG--------ETSKIMLILYATFFIVV 135 Query: 152 FSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASE 211 + + ++ D +RS S WQ ++ +P ++P + + ++M + ++ +E Sbjct: 136 LNTLTGVLSVEEDKIRSARSMGASEWQIVLHVVIPATVPFMFTGIRLAMGTSFMAIIGAE 195 Query: 212 MIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 MI + G+G I + I ++ + + FL D+ + Sbjct: 196 MIASNE------GVGYLIWNSRLFFRTDWIFVGLICLGLMGFLTDRAV 237 >gi|288917422|ref|ZP_06411788.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EUN1f] gi|288351125|gb|EFC85336.1| binding-protein-dependent transport systems inner membrane component [Frankia sp. EUN1f] Length = 313 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 83/251 (33%), Gaps = 14/251 (5%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDI-FWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYV 379 G R P + + I W + W + + ++ Sbjct: 56 GARRRGVPRWVRRPVGPLCLLAAWQIAVWTGSASTELLASPWTVVTTFADLVGNGELPKA 115 Query: 380 IWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVS 439 I +++ R +++ I I + + G I Q++ P PL + Sbjct: 116 I---LVSLRRAGTGLLLGGFIGITLALLAGLFRLGEDLIDAAVQMIRTVPFVGLIPLFII 172 Query: 440 CVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIIL 499 + L+ FG + + N AG E A + + R++IL Sbjct: 173 WFGIGERPK----TALVAFGVAFPLYLNTYAGIRNVDATLVEAARTVGLGRAGLIRHVIL 228 Query: 500 PGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGV 559 PG P + G + G AW A I +E + GLG + + E +V+ + Sbjct: 229 PGALPNVLVGLRFSLGIAWLALIFAEQIN------ANRGLGHLMNRAQEFQRTDIIVVCL 282 Query: 560 LIMCCFVLALN 570 ++ LA++ Sbjct: 283 VVYALLGLAVD 293 Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 90/259 (34%), Gaps = 19/259 (7%) Query: 3 LYNILPPFISRRIFPNIF----DLLAFVLVIGIINILLHGIQETTV-PRDIVDIVPITLD 57 L ++P RR P L + I E P +V + Sbjct: 49 LTTVVPAGARRRGVPRWVRRPVGPLCLLAAWQIAVWTGSASTELLASPWTVVTTFADLVG 108 Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 LP+ + R + +++ A LA R ++ + +++++P +G + Sbjct: 109 NGELPKAILVSLRRAGTGLLLGGFIGITLALLAGLFRLGEDLIDAAVQMIRTVPFVGLIP 168 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 +++F K + + + + Y + N+ L E +R+ L Sbjct: 169 LFIIWFGIGERPKTA--------LVAFGVAFPLYLNTYAGIRNVDATLVEAARTVGLGRA 220 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 ++ +P ++P ++ + S+ W ++ +E I G+G + A + Q Sbjct: 221 GLIRHVILPGALPNVLVGLRFSLGIAWLALIFAEQINAN------RGLGHLMNRAQEFQR 274 Query: 238 LLAILYAMLTMLGVIFLYD 256 I+ ++ + D Sbjct: 275 TDIIVVCLVVYALLGLAVD 293 >gi|221209826|ref|ZP_03582807.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD1] gi|221170514|gb|EEE02980.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD1] Length = 287 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 104/265 (39%), Gaps = 20/265 (7%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61 PP +RR + + L + ++ G++ +P ++V D + Sbjct: 21 PPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDTLARMGAARV 80 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 ++ + LR+ + I V SRR+ +L P +++IP L ++ ++ Sbjct: 81 ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + E I I + + ++ + N+ R L E+ +RL F Sbjct: 141 WLGID--------EAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P LV + +S W F+VA+E+I G+G ++ + + Sbjct: 193 RILLPAALPQLVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLV 246 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 A+L + + L D + R + W Sbjct: 247 FGAILLLALLGKLTDGAMRRIELHW 271 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 84/246 (34%), Gaps = 10/246 (4%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 + + + P ++ L + F V G + I + Sbjct: 12 DALVRRPCAPPRATRRDPLRAWRIAGIALPFAALALIEFGVRRGGLPANLVPAPSEIFDT 71 Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 V + RV I + + + VG +G I + ++P Q L A P+ Sbjct: 72 LARMGAARVARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPS 131 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 + P+++ + L+ G + + V+AG E+ + + + Sbjct: 132 LAWVPVLLLWLGI----DEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRP 187 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 +R I+LP P VTG T AW + +E+ + T GLG +++ E G Sbjct: 188 LALFRRILLPAALPQLVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETG 241 Query: 551 SFPEVV 556 V Sbjct: 242 RPDLVF 247 >gi|289667090|ref|ZP_06488165.1| ABC transporter permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 264 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 89/225 (39%), Gaps = 15/225 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ + L Q+ + ++ R + I F L SR +L Sbjct: 39 LPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLD 98 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 L +++++P L + +++F E A +F + + + + Y + ++ Sbjct: 99 SALQMLRNVPHLALIPLVILWFGID--------EGAKLFLVALGTFFPIYLNTYHGVRSV 150 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E++R++ L G Q FW + +P ++P ++ + + W ++ +E I Sbjct: 151 DPALIEMARNYGLRGPQLFWDVLLPGALPSILVGLRFGLGLMWLTLIVAETISASS---- 206 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 GIG A + ++ A++ + L D L R + W Sbjct: 207 --GIGYLATNAREFLQTDIVVVAIVLYALLGKLAD-LAARGLEAW 248 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R V + I I +G+ G + Q+L P PLV+ Sbjct: 63 AISSWRAAVGLAIGGSIGFALGLLTGVSRVAERLLDSALQMLRNVPHLALIPLVILWFGI 122 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ GT + I N G + E+A ++ + G + + ++LPG Sbjct: 123 ----DEGAKLFLVALGTFFPIYLNTYHGVRSVDPALIEMARNYGLRGPQLFWDVLLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G G W IV+E S ++G+G + E VV+ +++ Sbjct: 179 PSILVGLRFGLGLMWLTLIVAETIS------ASSGIGYLATNAREFLQTDIVVVAIVLYA 232 Query: 564 CFVLALN 570 + Sbjct: 233 LLGKLAD 239 >gi|221196133|ref|ZP_03569180.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD2M] gi|221202806|ref|ZP_03575825.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD2] gi|221176740|gb|EEE09168.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD2] gi|221182687|gb|EEE15087.1| putative aliphatic sulfonates transport permease protein SsuC [Burkholderia multivorans CGD2M] Length = 287 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 104/265 (39%), Gaps = 20/265 (7%) Query: 8 PPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD------VHSL 61 PP + R + + L + ++ +G++ +P ++V D + Sbjct: 21 PPRATPRDPLRAWRIAGIALPFAALALIEYGVRRGGLPANLVPAPSEIFDTLARMGAARV 80 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 ++ + LR+ + I V SRR+ +L P +++IP L ++ ++ Sbjct: 81 ARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTFQALRAIPSLAWVPVLLL 140 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + E I I + + ++ + N+ R L E+ +RL F Sbjct: 141 WLGID--------EAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIELGALYRLRPLALFR 192 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P +V + +S W F+VA+E+I G+G ++ + + Sbjct: 193 RILLPAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFLLSDGRETGRPDLV 246 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVW 266 A+L + + L D + R + W Sbjct: 247 FGAILLLALLGKLTDGAMRRIELHW 271 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 85/254 (33%), Gaps = 13/254 (5%) Query: 306 FSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI- 364 SP L R P + L+ ++ G+ + Sbjct: 4 LSPTVARDDALVRRPCAPPRATPRDPLRAWRIAGIALPFAALALIEYGVRRGGLPANLVP 63 Query: 365 --GYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFA 422 I + V + RV I + + + VG +G I + ++P Sbjct: 64 APSEIFDTLARMGAARVARHVGASALRVAAGFAIGASLALVVGAAMGVSRRIDALLEPTF 123 Query: 423 QLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEV 482 Q L A P+ + P+++ + L+ G + + V+AG E+ Sbjct: 124 QALRAIPSLAWVPVLLLWLGI----DEAPKITLIAIGAFFPVHLAVVAGIRNVDRKLIEL 179 Query: 483 ASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAY 542 + + + +R I+LP P VTG T AW + +E+ + T GLG Sbjct: 180 GALYRLRPLALFRRILLPAALPQIVTGLRTGLSLAWMFMVAAELIA------ATRGLGFL 233 Query: 543 IAESTEKGSFPEVV 556 +++ E G V Sbjct: 234 LSDGRETGRPDLVF 247 >gi|148976132|ref|ZP_01812875.1| putative permease [Vibrionales bacterium SWAT-3] gi|145964527|gb|EDK29781.1| putative permease [Vibrionales bacterium SWAT-3] Length = 299 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 96/232 (41%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++V+G+ L++ + + + + + + RT + ++S+ Sbjct: 64 LIVLGVCTGLVYAASRSWKLALGCVLSLLLIGYFGMWEDTMRTLSIITVCTLVSIFLGIP 123 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S R ++ P+LDIMQ++P +L V+ GK+ G I+AI Sbjct: 124 IGIAMARSNRAQSIVTPLLDIMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ W + +P +MP ++ + ++ Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + +I Q L ++ + L+D+ Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280 Score = 77.3 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + L + C A +W+ V + T+ + V +++ Sbjct: 60 STPWLIVLGVCTGLVYAASRSWKLALGCVLSLLLIGYFGMWEDTMRTLSIITVCTLVSIF 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GI + S + P ++ PA V+ VV + + + ++ Sbjct: 120 LGIPIGIAMARSNRAQSIVTPLLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E A++F + + + LP P + G A + Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + +S F ++ + + +R Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280 >gi|253686433|ref|YP_003015623.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753011|gb|ACT11087.1| binding-protein-dependent transport systems inner membrane component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 264 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 106/269 (39%), Gaps = 17/269 (6%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 P +++R+ P + + V + + P ++ + L Q+ Sbjct: 3 RTPSSLAQRLAPFLLPVTLLVAWQVAVEFGWLSNRILPAPSSVITAGWSLIYSGELWQHL 62 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + + R L I + SR +L + +++++P L + +++F Sbjct: 63 AISGWRALIGFAIGGTIGLTLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI 122 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 E A IF + ++ + + Y + NI R L E++RS+ LSG F+ + + Sbjct: 123 D--------EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFYQVVL 174 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P ++ + ++ W ++ +E I GIG A + ++ A+ Sbjct: 175 PGALPSIMVGIRFALGFMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAI 228 Query: 246 LTMLGVIFLYD---QLLFRPMIVWSNKFR 271 + + L D Q L R + W+ ++ Sbjct: 229 ILYALLGKLADISAQGLERIWLRWNPAYQ 257 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 82/247 (33%), Gaps = 17/247 (6%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG------- 383 QR++ L V VA+ W S + + + + Sbjct: 3 RTPSSLAQRLAPFLLPVTLLVAWQVAVEFGWLSNRILPAPSSVITAGWSLIYSGELWQHL 62 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R ++ I I + +G G + Q++ P PLV+ Sbjct: 63 AISGWRALIGFAIGGTIGLTLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI 122 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ GT + + N G E+A S+ ++G + ++LPG Sbjct: 123 ----DEAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFYQVVLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S +G+G + E VV+ +++ Sbjct: 179 PSIMVGIRFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 232 Query: 564 CFVLALN 570 + Sbjct: 233 LLGKLAD 239 >gi|333008553|gb|EGK28021.1| taurine transport system permease protein tauC [Shigella flexneri VA-6] Length = 279 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 102/269 (37%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVQALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------VTRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 104/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVQALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I V G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIAV------TRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|260892265|ref|YP_003238362.1| binding-protein-dependent transport systems inner membrane component [Ammonifex degensii KC4] gi|260864406|gb|ACX51512.1| binding-protein-dependent transport systems inner membrane component [Ammonifex degensii KC4] Length = 245 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 15/202 (7%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ +R++ + +A+ +P+G+++G P + PF L+ P V PL++ Sbjct: 53 LVSTYRILAGMFLATTTAVPLGLFLGRCPRADRLLGPFFSLIYPVPKIVLVPLIMVVFGL 112 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L ++L++ F IL V GA + +S + G ++R+++ P + Sbjct: 113 GDAAKILLITLVLFF----QILLPVRDGARHLSPYLVDAVTSLGVRGLAFYRHVVFPAVL 168 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G A +E + GLG Y+ ++ + ++P++ GVL M Sbjct: 169 PEVLTGLRVASGTAIAVLFFAETIA------SQEGLGYYLLDAWTRYAYPDLYAGVLAMS 222 Query: 564 CFVLALNRFLWHPLYLYGTRCL 585 L L + R L Sbjct: 223 LLGFILYSLL-----EWLERRL 239 Score = 84.6 bits (208), Expect = 5e-14, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 14/202 (6%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 L +T R+L+ M ++ + R +L P ++ +P + + Sbjct: 45 PGPLGFNWLVSTYRILAGMFLATTTAVPLGLFLGRCPRADRLLGPFFSLIYPVPKIVLVP 104 Query: 118 FTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGW 177 +V F + A I I + + + ++ L + S + G Sbjct: 105 LIMVVFGLG--------DAAKILLITLVLFFQILLPVRDGARHLSPYLVDAVTSLGVRGL 156 Query: 178 QKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQD 237 + ++ P +P ++ + ++ + +E I G+G Y+ A Sbjct: 157 AFYRHVVFPAVLPEVLTGLRVASGTAIAVLFFAETIA------SQEGLGYYLLDAWTRYA 210 Query: 238 LLAILYAMLTMLGVIFLYDQLL 259 + +L M + F+ LL Sbjct: 211 YPDLYAGVLAMSLLGFILYSLL 232 >gi|114319894|ref|YP_741577.1| binding-protein-dependent transport systems inner membrane component [Alkalilimnicola ehrlichii MLHE-1] gi|114226288|gb|ABI56087.1| binding-protein-dependent transport systems inner membrane component [Alkalilimnicola ehrlichii MLHE-1] Length = 282 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L T +L A +++ S R V+ P+LD MQ++P +L Sbjct: 89 QLWVATMETLTLVLFATAVAVTIALPIGIWGGLSGRAHRVMTPVLDFMQTMPAFVYLIPA 148 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V +F +AA+FA + + +P +L E + +F + QK Sbjct: 149 VPFFGLG--------PVAAMFATVIFSMPPAIRLTTLGIRQVPAELVEAADAFGATRRQK 200 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + + +P ++P ++ + ++ VV + MI G G+GS + AI+ Sbjct: 201 LFKVQLPLAVPTIMAGINQTIMLALSMVVIAAMIGAG-------GLGSEVWRAIQRLQSG 253 Query: 240 AILYAMLTMLGVIFLYDQL 258 A + ++ + + D++ Sbjct: 254 NGFEAGIAIVILAMILDRV 272 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 87/279 (31%), Gaps = 13/279 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F+ I + W K T + RF L + + + I F + Sbjct: 6 PFIGKIPLADWIDSGLDWLTDKFALVTRAISRFMGDGVELVVGALTYPPPWVVILGFMAL 65 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 G + + L+V + +T+ V+ +A I +P+GIW G Sbjct: 66 AWWLAGRRVAIGTGLGLALLWNLQLWVATMETLTL--VLFATAVAVTIALPIGIWGGLSG 123 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + P + PA V+ V + + + + G Sbjct: 124 RAHRVMTPVLDFMQTMPAFVYLIPAVPFFGLGPVAAMFATVIF----SMPPAIRLTTLGI 179 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P + E A +F T + + LP P + G A + +++ + G Sbjct: 180 RQVPAELVEAADAFGATRRQKLFKVQLPLAVPTIMAGINQTIMLALSMVVIAAMIGAG-- 237 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG+ + + ++ + + + L+R Sbjct: 238 -----GLGSEVWRAIQRLQSGNGFEAGIAIVILAMILDR 271 >gi|293413621|ref|ZP_06656270.1| taurine transporter subunit [Escherichia coli B185] gi|291433679|gb|EFF06652.1| taurine transporter subunit [Escherichia coli B185] Length = 275 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|91224154|ref|ZP_01259417.1| putative permease [Vibrio alginolyticus 12G01] gi|91191065|gb|EAS77331.1| putative permease [Vibrio alginolyticus 12G01] Length = 299 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 96/232 (41%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++G+ L++ + I + + + RT + ++++ Sbjct: 64 FIILGVCTTLVYAASRSWKLAAACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIALGIP 123 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S R+ V+ P+LD+MQ++P +L V+ GK+ G I+AI Sbjct: 124 IGIAMARSNRIQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ + + +P +MP ++ + ++ Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + +I Q L L ++ + L+D+ Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 Score = 80.0 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + I C A +W+ + T+ + V ++A Sbjct: 60 STPWFIILGVCTTLVYAASRSWKLAAACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIA 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GI + I S + P ++ PA V+ VV + + + ++ Sbjct: 120 LGIPIGIAMARSNRIQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E A++F + + + LP P + G A + Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + +S F +L L + + +R Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|62183746|gb|AAX73264.1| transmembrane protein [Methanohalophilus portucalensis FDF-1] Length = 276 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 18/237 (7%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 LL VL+ I ++ + + + IV +++D L +Y+ T ++S+ ++L+ Sbjct: 51 LLFVVLIAAIAYVVGRKDWKLALGTALGFIVILSMD---LWEYSMETIALVISSAALALI 107 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 LAAKS L +L PILD+MQ++P +L V++F G V G +F+ Sbjct: 108 IGIPLGILAAKSETLHRILRPILDLMQTMPSFVYLIPAVIFFGL---GNVPGMIATVVFS 164 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + + +P++L EV+ +F + WQK + +P ++ ++ + + Sbjct: 165 MPPA-----IRLTTLGITQVPKELVEVADAFGSTSWQKLIKVEIPVALKTIMAGVNQCIM 219 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + + I+ D+ A L ++ + + D+L Sbjct: 220 LALSMVVIASMI-------GARGLGYQVLIGIQRVDIGVGFEAGLGIVIIAIVLDRL 269 Score = 73.8 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 76/233 (32%), Gaps = 11/233 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +L + + V W+ F + + T+ V+ +A I Sbjct: 48 MPPLLFVVLIAAIAYVVGRKDWKLALGTALGFIVILSMDLWEYSMETIALVISSAALALI 107 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP+GI + ++P L+ P+ V+ V ++ + + Sbjct: 108 IGIPLGILAAKSETLHRILRPILDLMQTMPSFVYLIPAVIFFGLGNVPGMIATVVF---- 163 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + G + P + EVA +F T W+ + +P + G A + Sbjct: 164 SMPPAIRLTTLGITQVPKELVEVADAFGSTSWQKLIKVEIPVALKTIMAGVNQCIMLALS 223 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + GLG + ++ L + + L+R Sbjct: 224 MVVIASMIG-------ARGLGYQVLIGIQRVDIGVGFEAGLGIVIIAIVLDRL 269 >gi|298292916|ref|YP_003694855.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296929427|gb|ADH90236.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 201 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 68/174 (39%), Gaps = 10/174 (5%) Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+G+ +G P I + P + P + PL++ L+ LL+ Sbjct: 24 VGIPLGLAMGMSPAIRGLLDPPIEFYRPIPPLAYLPLMIIWFGIGELSK----VLLIFLS 79 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + AG + + A SF + W+ ++ILP P +T G W Sbjct: 80 VFAPVALGARAGVKSAAIEQIHAAYSFGASRWKVLCHVILPASLPEILTAMRIGIGFGWT 139 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ + T GLG + +++ V++G++++ + + Sbjct: 140 TLVAAEMIA------ATEGLGYMVLSASQFLQTSTVIMGIVVIAAIACLFDMLM 187 Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 79/191 (41%), Gaps = 17/191 (8%) Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P ++ + IP L +L +++F EL+ + Sbjct: 24 VGIPLGLAMGMSPAIRGLLDPPIEFYRPIPPLAYLPLMIIWFGIG--------ELSKVLL 75 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 IF S + + + + + SF S W+ ++ +P S+P ++ M + + Sbjct: 76 IFLSVFAPVALGARAGVKSAAIEQIHAAYSFGASRWKVLCHVILPASLPEILTAMRIGIG 135 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+EMI + G+G + A + ++ ++ + + L+D +L Sbjct: 136 FGWTTLVAAEMIAATE------GLGYMVLSASQFLQTSTVIMGIVVIAAIACLFDMLMRL 189 Query: 259 LFRPMIVWSNK 269 + R ++ W K Sbjct: 190 IERRIVPWKGK 200 >gi|241205709|ref|YP_002976805.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859599|gb|ACS57266.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 280 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 17/254 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L + I + P + + + L L + TT+R+ I + Sbjct: 40 LGLLFWEIAIAAGWFSGRLMPPPSRVAATLWVLLKSGELLNHIGITTVRVFFGFAIGAVT 99 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + + ++ P L ++SIP + ++ +++F KV + F + Sbjct: 100 ATIAGAITGYFGLARRLIDPSLQALRSIPSIAWVPLFILWFGIFETSKVALIAVGVFFPV 159 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + ++ ++ R + EV R FRLSG+ + +P P V + + Sbjct: 160 Y--------LGISGAILSVDRKIVEVGRIFRLSGFTLVRRVMLPAVFPAYVTALRSGLGL 211 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 GW FVVA+E + + G+G + + I+ A++ V L D LL Sbjct: 212 GWMFVVAAEFMGASE------GLGYLLVDGQQMGKPDQIMAAIIAFAVVGKLTDSLLLAA 265 Query: 261 -RPMIVWSNKFRLE 273 P + W + +R E Sbjct: 266 TTPFLTWQDSYRRE 279 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 17/245 (6%) Query: 336 SNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-------ITMF 388 SN+ +L + +AI W S + L+V+ IT Sbjct: 28 SNKVAVAVLLPALGLLFWEIAIAAGWFSGRLMPPPSRVAATLWVLLKSGELLNHIGITTV 87 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 RV I ++ G G+ I P Q L + P+ + PL + + + Sbjct: 88 RVFFGFAIGAVTATIAGAITGYFGLARRLIDPSLQALRSIPSIAWVPLFILWFGIFETSK 147 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L+ G + + + + EV F ++G+ R ++LP +FP YVT Sbjct: 148 ----VALIAVGVFFPVYLGISGAILSVDRKIVEVGRIFRLSGFTLVRRVMLPAVFPAYVT 203 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 + G W + +E + GLG + + + G +++ ++ Sbjct: 204 ALRSGLGLGWMFVVAAEFMG------ASEGLGYLLVDGQQMGKPDQIMAAIIAFAVVGKL 257 Query: 569 LNRFL 573 + L Sbjct: 258 TDSLL 262 >gi|218693829|ref|YP_002401496.1| taurine transporter subunit [Escherichia coli 55989] gi|218350561|emb|CAU96249.1| taurine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] Length = 275 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVASLQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWTVASLQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|167923398|ref|ZP_02510489.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei BCC215] Length = 283 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 91 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 261 AIALALEIGLRALQRRLTPW 280 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 80 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280 >gi|212693216|ref|ZP_03301344.1| hypothetical protein BACDOR_02726 [Bacteroides dorei DSM 17855] gi|237709959|ref|ZP_04540440.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 9_1_42FAA] gi|237725376|ref|ZP_04555857.1| glycine betaine/L-proline transport system permease [Bacteroides sp. D4] gi|265753610|ref|ZP_06088965.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_1_33FAA] gi|212664321|gb|EEB24893.1| hypothetical protein BACDOR_02726 [Bacteroides dorei DSM 17855] gi|229436063|gb|EEO46140.1| glycine betaine/L-proline transport system permease [Bacteroides dorei 5_1_36/D4] gi|229456052|gb|EEO61773.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 9_1_42FAA] gi|263235324|gb|EEZ20848.1| glycine betaine/L-proline transport system permease [Bacteroides sp. 3_1_33FAA] Length = 274 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 L+ + I + + ++ I I+ + L +T +LS+ +I+L Sbjct: 41 LMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIAL 100 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + +A S+R +L PILD+MQ++P +L V++F G V GA IF Sbjct: 101 IMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGL---GTVPGAFATIIF 157 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + +P+++ E SRSF + Q + + +P ++P ++ + ++ Sbjct: 158 AMP-----PVVRLTSLGIKQVPKNVIEASRSFGATPMQLLFKVQLPLALPTIMTGINQTI 212 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G + I + + + ++ + + D++ Sbjct: 213 LMSLSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 Score = 81.1 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L F V + +AW G V+ FT +L + +G T+ V+ IIA Sbjct: 40 ILMWIPFYVTIALLAILAWYKSGKGVSIFTILGLLLIWGMGFWNETMQTLALVLSSTIIA 99 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 I+ +P+GIW + P L+ PA V+ V + + Sbjct: 100 LIMGLPLGIWSANSKRCDKILHPILDLMQTMPAFVYLIPAVLFFGLGTVPGAFATIIF-- 157 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G P + E + SF T + + LP P +TG + Sbjct: 158 --AMPPVVRLTSLGIKQVPKNVIEASRSFGATPMQLLFKVQLPLALPTIMTGINQTILMS 215 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + + G + + + L+R Sbjct: 216 LSMVVIAAMIAAG-------GLGEIVLKGITQMKIGLGFEGGIAVVILAIILDRI 263 >gi|150390569|ref|YP_001320618.1| binding-protein-dependent transport systems inner membrane component [Alkaliphilus metalliredigens QYMF] gi|149950431|gb|ABR48959.1| binding-protein-dependent transport systems inner membrane component [Alkaliphilus metalliredigens QYMF] Length = 287 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L T +L++ VIS++ L AK++ + +++PI+D+MQ++P +L Sbjct: 93 GLWVPTMSTLSMVLTSTVISIMLGIPIGILIAKNQIMNRIIMPIMDLMQTMPAFVYLIPA 152 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V +F GKV G IF+I + +P +L E + +F +G QK Sbjct: 153 VSFFRM---GKVPGIFATVIFSIA-----PCIRLTNLGIRQVPEELIEAADAFGSTGAQK 204 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + P ++ ++ + ++ VV S MI G G+G + I+ + Sbjct: 205 LMKVQFPLALSTIMAGVNQTIMLSLSMVVISAMIGAG-------GLGREVWHGIQRLQVG 257 Query: 240 AILYAMLTMLGVIFLYDQL 258 + A + ++ + + D++ Sbjct: 258 SAFEAGIAVVILAMILDRI 276 Score = 72.6 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 80/217 (36%), Gaps = 16/217 (7%) Query: 361 WQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVGIWIGFRPHIS 415 W+ V F++ +L V LG T+ V+ +I+ ++ IP+GI I ++ Sbjct: 71 WRVASKGVGIFSFLGLLLVYNLGLWVPTMSTLSMVLTSTVISIMLGIPIGILIAKNQIMN 130 Query: 416 SKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAF 475 I P L+ PA V+ + VS++ + + +IF I G Sbjct: 131 RIIMPIMDLMQTMPAFVYL---IPAVSFFRMGKVPGIFATVIFSIAPCIRL-TNLGIRQV 186 Query: 476 PNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLR 535 P + E A +F TG + + P + G + + ++S + G Sbjct: 187 PEELIEAADAFGSTGAQKLMKVQFPLALSTIMAGVNQTIMLSLSMVVISAMIGAG----- 241 Query: 536 TTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + ++ + + + L+R Sbjct: 242 --GLGREVWHGIQRLQVGSAFEAGIAVVILAMILDRI 276 >gi|91212039|ref|YP_542025.1| glycine betaine transporter membrane protein [Escherichia coli UTI89] gi|110642804|ref|YP_670534.1| glycine betaine transporter membrane protein [Escherichia coli 536] gi|117624914|ref|YP_853857.1| glycine betaine transporter membrane protein [Escherichia coli APEC O1] gi|191171377|ref|ZP_03032926.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli F11] gi|218559670|ref|YP_002392583.1| glycine betaine transporter membrane protein [Escherichia coli S88] gi|237706700|ref|ZP_04537181.1| high-affinity transport system for glycine betaine and proline [Escherichia sp. 3_2_53FAA] gi|300990598|ref|ZP_07179248.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|91073613|gb|ABE08494.1| high-affinity transport system for glycine betaine and proline [Escherichia coli UTI89] gi|110344396|gb|ABG70633.1| glycine betaine/L-proline transport system permease protein ProW [Escherichia coli 536] gi|115514038|gb|ABJ02113.1| glycine betaine/L-proline transport system permease protein P [Escherichia coli APEC O1] gi|190908311|gb|EDV67901.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli F11] gi|218366439|emb|CAR04191.1| glycine betaine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|226899740|gb|EEH85999.1| high-affinity transport system for glycine betaine and proline [Escherichia sp. 3_2_53FAA] gi|294493392|gb|ADE92148.1| glycine betaine/L-proline ABC transporter, permease protein [Escherichia coli IHE3034] gi|300305715|gb|EFJ60235.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|307625750|gb|ADN70054.1| glycine betaine transporter membrane protein [Escherichia coli UM146] gi|320194818|gb|EFW69447.1| L-proline glycine betaine ABC transport system permease protein ProW [Escherichia coli WV_060327] gi|323951100|gb|EGB46976.1| inner membrane transport system [Escherichia coli H252] gi|323957109|gb|EGB52834.1| inner membrane transport system [Escherichia coli H263] gi|324014409|gb|EGB83628.1| ABC transporter, permease protein [Escherichia coli MS 60-1] Length = 354 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|254193642|ref|ZP_04900074.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|169650393|gb|EDS83086.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei S13] Length = 285 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 152 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 153 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 208 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 209 PDILTGMRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 262 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 263 AIALALEIGLRALQRRLTPW 282 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 82 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 141 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 142 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 193 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ M +++ GW +VA+E+I G+G + A + Sbjct: 194 TRVQLLRHVVLPSALPDILTGMRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 247 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 248 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 282 >gi|323965317|gb|EGB60775.1| inner membrane transport system [Escherichia coli M863] gi|327254683|gb|EGE66299.1| taurine transport system permease protein tauC [Escherichia coli STEC_7v] Length = 275 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVMAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ +I A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALIAAVLIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWAVAALQLISPLFLPPPQQVMAKLLTIAGPQGFMDATLWQHLAASLTRIVLALIAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|260913934|ref|ZP_05920408.1| ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260632021|gb|EEX50198.1| ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 613 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 15/180 (8%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L +T ++ + + L L A + RL +L PILD++Q++P +L Sbjct: 420 GLWFPLMQTLALLIVSALFITLLGIPIGILMASNARLHRILQPILDVIQTMPSFVYLIPV 479 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 ++ F GKV ++AI + + + + E ++SF + WQ Sbjct: 480 LMLFG---IGKVPALFATVVYAIA-----PLIRLTALGIRQVNPQIIEAAQSFGSTRWQL 531 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 ++ +P + ++ + ++ VV + MI G+G Y+ AI+ ++ Sbjct: 532 LVWVLLPQAKASIMAGINQAVMMSLGMVVLASMI-------GAKGLGEYVLQAIQTLNIG 584 Score = 94.2 bits (233), Expect = 6e-17, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 103/302 (34%), Gaps = 31/302 (10%) Query: 259 LFRPMIVWSNKFRLERTTGIYPAD------SWVLYLFRKTNFLRFIGYSSWNFFSPLSNN 312 +++ + K +L++ W + + ++ + F + Sbjct: 309 IWQKWVSQQAKEKLQQFLQQDEKQENSIFAPWSIADSLNRSLVKTVQNYGVEFRQISQIS 368 Query: 313 VKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT 372 + L + + P + + + +WF ++C I + Sbjct: 369 LDYLLLPIESVLQATPAWLILILIALISWHATKKWWFSLLCLGGIYLI------------ 416 Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 L + + T+ ++V + +++ IP+GI + + +QP ++ P+ V Sbjct: 417 --GALGLWFPLMQTLALLIVSALFITLLGIPIGILMASNARLHRILQPILDVIQTMPSFV 474 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + V+ + P L+ +++ ++ G E A SF T W+ Sbjct: 475 YLIPVLMLFGIGKV-PALFATVVYAIA---PLIRLTALGIRQVNPQIIEAAQSFGSTRWQ 530 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 +++LP + G A + +++ + GLG Y+ ++ + + Sbjct: 531 LLVWVLLPQAKASIMAGINQAVMMSLGMVVLASMIG-------AKGLGEYVLQAIQTLNI 583 Query: 553 PE 554 + Sbjct: 584 GQ 585 >gi|296159378|ref|ZP_06842203.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295890362|gb|EFG70155.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 288 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 12/259 (4%) Query: 300 YSSWNFFSPLSNNVKKLCRTLGVI--RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAI 357 ++ +P ++L + R P + L + V V Sbjct: 2 AATEETLAPARRASQRLAASNPAQNQRIRDPLRPWRYAGLALPVLFLAVIEVLVRASVLP 61 Query: 358 GIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSK 417 + I L + ++ RV + S + + +G +G + Sbjct: 62 AHLVPAPSAIAQTLWDLGGLRLARHVGASVARVCAGFALGSALALLIGAAMGLSRRADAL 121 Query: 418 IQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPN 477 + P Q L A P+ + P+++ + L+ G + + V+AG Sbjct: 122 LDPAFQALRAIPSLAWVPMLLLWMGI----DEAPKITLIAIGAFFPVQLGVVAGIHGVDR 177 Query: 478 DFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTT 537 E +T + I+LP P TG T AW + +E+ + T Sbjct: 178 KLIEFGEVNRLTQRALFTRILLPASMPQIFTGLRTGLSLAWMFMVAAELIA------ATR 231 Query: 538 GLGAYIAESTEKGSFPEVV 556 GLG +++ E G V Sbjct: 232 GLGYLLSDGRETGRPDVVF 250 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 14/220 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 + F+ VI ++ + L L ++ + R+ + + Sbjct: 45 VLFLAVIEVLVRASVLPAHLVPAPSAIAQTLWDLGGLRLARHVGASVARVCAGFALGSAL 104 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + SRR +L P +++IP L ++ +++ E I I Sbjct: 105 ALLIGAAMGLSRRADALLDPAFQALRAIPSLAWVPMLLLWMGID--------EAPKITLI 156 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + + + + R L E RL+ F + +P SMP + + +S Sbjct: 157 AIGAFFPVQLGVVAGIHGVDRKLIEFGEVNRLTQRALFTRILLPASMPQIFTGLRTGLSL 216 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAIL 242 W F+VA+E+I G+G ++ + + Sbjct: 217 AWMFMVAAELIA------ATRGLGYLLSDGRETGRPDVVF 250 >gi|327393356|dbj|BAK10778.1| ABC-type sulfonate transport system, permease component SsuC [Pantoea ananatis AJ13355] Length = 279 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 17/239 (7%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P IV L Q+ + ++ R L I V + SR +L Sbjct: 55 LPAPEKIVTTFWQLAVSGELWQHLAISSWRALLGFSIGGSLGLVLGLITGTSRLGERLLD 114 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 L +++++P L + +++F E A IF + ++ + + Y + N+ Sbjct: 115 TSLQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYLNTYHGIRNV 166 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 R L E++RS+ LSGW F + +P ++P ++ + ++ W ++ +E I Sbjct: 167 DRGLVEMARSYGLSGWSLFVQVILPGALPSIMVGVRFALGLMWLTLIVAETISANA---- 222 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVWSNKFRLERTTG 277 GIG A + ++ A++ + L D LL R + W ++ + T Sbjct: 223 --GIGYLAMNAREFLQTDVVMVAIILYALLGKLADVSALLLERVWLRWHPAYQRQEKTA 279 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 75/209 (35%), Gaps = 19/209 (9%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R ++ I + + +G+ G + Q+L P PLV+ Sbjct: 79 AISSWRALLGFSIGGSLGLVLGLITGTSRLGERLLDTSLQMLRNVPHLALIPLVILWFGI 138 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ GT + I N G E+A S+ ++GW + +ILPG Sbjct: 139 ----DESAKIFLVALGTLFPIYLNTYHGIRNVDRGLVEMARSYGLSGWSLFVQVILPGAL 194 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S G+G + E V++ +++ Sbjct: 195 PSIMVGVRFALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVMVAIILYA 248 Query: 564 CFV-------LALNRFL--WHPLYLYGTR 583 L L R WHP Y + Sbjct: 249 LLGKLADVSALLLERVWLRWHPAYQRQEK 277 >gi|20094040|ref|NP_613887.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Methanopyrus kandleri AV19] gi|19887017|gb|AAM01817.1| Homolog of ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, permease component [Methanopyrus kandleri AV19] Length = 251 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ +++RV V IA++ + +G+ +G + + +++ P + P Sbjct: 53 PGEILKHALTSLYRVAVGYSIAAVAGVSLGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIP 112 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L + + ++ G+ + IL N I+G + + E A + R Sbjct: 113 LAIVWFGIGDPS----AFFIIFVGSFFPILINTISGIRSVDRIYVEAALNLGADDTALIR 168 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++++PG P TG G W + +E+ + +GLG I E+ + +V Sbjct: 169 HVLVPGALPNIFTGLRVGLGVGWMCVVAAEMIA------AKSGLGYMIIEAQRILATDQV 222 Query: 556 VLGVLIMCCFVLALNR 571 + G++ + L ++R Sbjct: 223 IAGMITIGLLGLVMDR 238 Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 97/247 (39%), Gaps = 18/247 (7%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 +A + + ++ L P V V + + + ++A + R+ I+ + Sbjct: 19 VAVLAIWQAVSGLGLINPVLLPPPSQVFSVFVEM-PGEILKHALTSLYRVAVGYSIAAVA 77 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 L R + +++I++ IP + ++ +V+F P +A F I Sbjct: 78 GVSLGVLMGTYRTAHAAMDLLIEIIRPIPPIAWIPLAIVWFGIGDP--------SAFFII 129 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 F + + + + ++ R E + + ++ VP ++P + + + + Sbjct: 130 FVGSFFPILINTISGIRSVDRIYVEAALNLGADDTALIRHVLVPGALPNIFTGLRVGLGV 189 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259 GW VVA+EMI G+G I A + ++ M+T+ + + D + L Sbjct: 190 GWMCVVAAEMIAAKS------GLGYMIIEAQRILATDQVIAGMITIGLLGLVMDRGFRYL 243 Query: 260 FRPMIVW 266 R +VW Sbjct: 244 ERRALVW 250 >gi|33594562|ref|NP_882206.1| putative transport system permease protein [Bordetella pertussis Tohama I] gi|33564638|emb|CAE43960.1| putative transport system permease protein [Bordetella pertussis Tohama I] gi|332383973|gb|AEE68820.1| putative transport system permease protein [Bordetella pertussis CS] Length = 265 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 77/190 (40%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++F +V I + +P G++ G+ + + + P + P F P+ V Sbjct: 73 GASLFCALVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGL 132 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + +L++F Y + AGA + P + A S +T + + ++ P Sbjct: 133 GEMGK----VVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTRLQIFWRVVFPSSI 188 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P+ TG A +W + +E+ GLG I+++ + P V +G+ ++ Sbjct: 189 PHIFTGLKVAMALSWAVVVAAELVGAQK------GLGFMISDAAQLFQIPVVFIGIALIG 242 Query: 564 CFVLALNRFL 573 L LN L Sbjct: 243 LIGLVLNVML 252 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 92/247 (37%), Gaps = 19/247 (7%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS-----LPQYASRTTLRM 72 ++ ++ + + ++ L + +TL L + + Sbjct: 20 SVASVVGLLAIWTLVTNLGLVGPGYLPSPQAMFAQLVTLVEQGYGGKPLWDHVGASLFCA 79 Query: 73 LSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVI 132 L I +L + + + +G ++ PI+ ++ IP + F+ V+YF Sbjct: 80 LVGFAIGVLAGVPFGLFSGYHKAVGAMMSPIMAFIRPIPPIAFIPMAVLYFGLG------ 133 Query: 133 GAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGL 192 E+ + I + S ++P + S ++ Q FW + P S+P + Sbjct: 134 --EMGKVVLIVFTAFNYSFVSAQAGALSVPMSYYRAAESIGMTRLQIFWRVVFPSSIPHI 191 Query: 193 VWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVI 252 + ++M+ W VVA+E++ G+G I+ A + + + + + + Sbjct: 192 FTGLKVAMALSWAVVVAAELVG------AQKGLGFMISDAAQLFQIPVVFIGIALIGLIG 245 Query: 253 FLYDQLL 259 + + +L Sbjct: 246 LVLNVML 252 >gi|238796281|ref|ZP_04639791.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] gi|238719974|gb|EEQ11780.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] Length = 251 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 10/186 (5%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R++V + A I IPVGI +G + + + P ++ P + PL+V Sbjct: 58 ASLGRILVALFAAVSIGIPVGIAMGINSRLRAVLDPLIEIYRPIPPLAYLPLMVIWFGIG 117 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + LL+ + + G + A + T W+ R+++LP P Sbjct: 118 ETSK----ILLIYLAIFAPVTLATVVGVRSIEQVKVRAAQALGATRWQVLRFVVLPNALP 173 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 +TG G W+ + +E+ + T GLG + ++E + V+ G++++ Sbjct: 174 AILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSASEFLATDVVIAGIIVIAL 227 Query: 565 FVLALN 570 L Sbjct: 228 VAAGLE 233 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 96/235 (40%), Gaps = 19/235 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAM 76 L ++ L P+ +++ + P +L Q+ S + R+L A+ Sbjct: 8 LAVLIIWWAATVQELINPLFLPSPQQVLNQLMVIASPQGFMNATLWQHLSASLGRILVAL 67 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 ++ + RL VL P+++I + IP L +L V++F E Sbjct: 68 FAAVSIGIPVGIAMGINSRLRAVLDPLIEIYRPIPPLAYLPLMVIWFGIG--------ET 119 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 + I I+ + +T + + +I + +++ + WQ ++ +P ++P ++ + Sbjct: 120 SKILLIYLAIFAPVTLATVVGVRSIEQVKVRAAQALGATRWQVLRFVVLPNALPAILTGI 179 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + GW +VA+E+I G+G + A + ++ ++ + V Sbjct: 180 RIGLGVGWSTLVAAELIA------ATRGLGFMVQSASEFLATDVVIAGIIVIALV 228 >gi|296156261|ref|ZP_06839100.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295893767|gb|EFG73546.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 278 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 92/231 (39%), Gaps = 13/231 (5%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC---ITMFRVVVLIIIASI 399 ++ I+W V A G T ++ L ++ R+ + ++ A + Sbjct: 42 IVAIWWLAVAVFAAPGTLAAQFSPARAFETLPALITDDRLAVHIVTSLRRIAIGLLWALL 101 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +P+G IG + + + P Q L + P+ V + + L+ F Sbjct: 102 VGVPLGFLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGVGDR----AVYFLLAFA 157 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 W ++ + AG + + ++ S T ++ +PGI + +TG A G W Sbjct: 158 AVWPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWHVYVPGIAAHVLTGVRLAIGILWI 217 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 + +E+ ++GLG I ++ ++ ++ E+ +L++ L+ Sbjct: 218 VLVPAEMLG------VSSGLGYLILDTRDRLAYSELTAVILVIGALGFLLD 262 Score = 96.9 bits (240), Expect = 8e-18, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 15/230 (6%) Query: 29 IGIINILLHGIQETT-VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + + G P + +P + L + + R+ ++ +LL Sbjct: 48 LAVAVFAAPGTLAAQFSPARAFETLPALITDDRLAVHIVTSLRRIAIGLLWALLVGVPLG 107 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L + + L L P L ++ I L ++ V+ + A F + + V Sbjct: 108 FLIGRVKALDTALSPTLQFLRMISPLSWMPIAVMSLGVG--------DRAVYFLLAFAAV 159 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + S + +I + ++ S + + W++ VP ++ + +++ W + Sbjct: 160 WPLMMSTAAGVAHIDKRWLQLGESLAATRGEMLWHVYVPGIAAHVLTGVRLAIGILWIVL 219 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 V +EM+ V G+G I + +L + + FL D Sbjct: 220 VPAEMLGVSS------GLGYLILDTRDRLAYSELTAVILVIGALGFLLDF 263 >gi|262203356|ref|YP_003274564.1| binding-protein-dependent transporter inner membrane component [Gordonia bronchialis DSM 43247] gi|262086703|gb|ACY22671.1| binding-protein-dependent transport systems inner membrane component [Gordonia bronchialis DSM 43247] Length = 291 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 105/269 (39%), Gaps = 18/269 (6%) Query: 6 ILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYA 65 + P + R L+ ++V + G T P ++V + + Q+ Sbjct: 36 LRPGARTARAVRQSVGLVLVIVVWQLGARGWLGPT-TPAPTEVVTAGWDLVRSGEIWQHL 94 Query: 66 SRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMN 125 + +T R+ + I + V A R ++ + +++ +P + + +++F Sbjct: 95 AASTRRVGIGLAIGITIGVVLGAAAGTIRIAEDLVNAPIQVLRMMPAVALVPVFIIWFGI 154 Query: 126 LYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGV 185 E I I + ++ M +++ + N+ + L E +RS L+ + ++ + Sbjct: 155 D--------ETFKIALIIVAPIFPMYVNVFAGIRNVDQKLIEAARSLDLTRIEMLRFIIL 206 Query: 186 PFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAM 245 P ++P + + ++ GW +V +EM G+G + A + I + Sbjct: 207 PGALPQTLVGLRQALGIGWLVLVVAEM------QTTTVGLGFIMNDAKEYLRTDQIFLVL 260 Query: 246 LTMLGVIFLYD---QLLFRPMIVWSNKFR 271 + + + D +LL R + W N F Sbjct: 261 VIYAILGLITDLAVRLLERHFLSWRNGFE 289 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 79/247 (31%), Gaps = 10/247 (4%) Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG 383 R + ++ + W G + + + Sbjct: 35 RLRPGARTARAVRQSVGLVLVIVVWQLGARGWLGPTTPAPTEVVTAGWDLVRSGEIWQHL 94 Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 + RV + + I I + +G G + Q+L PA P+ + Sbjct: 95 AASTRRVGIGLAIGITIGVVLGAAAGTIRIAEDLVNAPIQVLRMMPAVALVPVFIIWFGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + L+I + + NV AG E A S +T R+IILPG Sbjct: 155 ----DETFKIALIIVAPIFPMYVNVFAGIRNVDQKLIEAARSLDLTRIEMLRFIILPGAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W +V+E+ T GLG + ++ E ++ L ++I Sbjct: 211 PQTLVGLRQALGIGWLVLVVAEM------QTTTVGLGFIMNDAKEYLRTDQIFLVLVIYA 264 Query: 564 CFVLALN 570 L + Sbjct: 265 ILGLITD 271 >gi|182416935|ref|ZP_02948319.1| taurine transport system permease protein TauC [Clostridium butyricum 5521] gi|237667333|ref|ZP_04527317.1| taurine transport system permease protein TauC [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379233|gb|EDT76734.1| taurine transport system permease protein TauC [Clostridium butyricum 5521] gi|237655681|gb|EEP53237.1| taurine transport system permease protein TauC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 262 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 85/197 (43%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + ++ +M R+V+ I+A+I IP+G+ G+ I + +P + P ++ L Sbjct: 62 ISLLQHLYASMERLVIAYILAAITAIPLGLASGYNSKIRAVFEPIIEFYRPLPPLAYYTL 121 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 +V + N L+ + I + ++ +D+ A + + +RY Sbjct: 122 LVLWMGI----DNKSKITLLFLASFAPIYISCMSSVLKIKSDYIYSAYTVGANKHQIFRY 177 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +I P P G TA G A+ + +E+ + +G+G + ++++ + Sbjct: 178 VIFPSCLPDIFVGLRTAIGVAYTTLVAAEMVA------AVSGIGWMVLDASKYLRSDIIF 231 Query: 557 LGVLIMCCFVLALNRFL 573 +G+ IM + L++ + Sbjct: 232 VGIAIMGITGILLDKII 248 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 17/213 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 SL Q+ + R++ A +++ + + + ++ V PI++ + +P L + T Sbjct: 63 SLLQHLYASMERLVIAYILAAITAIPLGLASGYNSKIRAVFEPIIEFYRPLPPLAYYTLL 122 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++ K I +F + + S S+ I D + + + Q Sbjct: 123 VLWMGIDNKSK--------ITLLFLASFAPIYISCMSSVLKIKSDYIYSAYTVGANKHQI 174 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 F Y+ P +P + + ++ + +VA+EM+ + GIG + A K Sbjct: 175 FRYVIFPSCLPDIFVGLRTAIGVAYTTLVAAEMVA------AVSGIGWMVLDASKYLRSD 228 Query: 240 AILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269 I + M L D + + ++ W K Sbjct: 229 IIFVGIAIMGITGILLDKIIRFIESKIVPWKGK 261 >gi|116252514|ref|YP_768352.1| aliphatic sulfonates transport permease protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257162|emb|CAK08257.1| putative aliphatic sulfonates transport permease protein [Rhizobium leguminosarum bv. viciae 3841] Length = 253 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 96/253 (37%), Gaps = 18/253 (7%) Query: 23 LAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +A V+ + + P D+ T+ LP + R + +++ Sbjct: 14 VAIVVFWQLASSAGWISSRIMPSPADVGLAFWSTMVSGQLPNDVLVSAGRAFAGLLVGGS 73 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 F+ SR + L ++++IP L + +++F E + +F Sbjct: 74 IGFLLGIANGVSRISEQLTDTTLQMLRTIPHLAMIPLVILWFGIG--------EESKLFL 125 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 ++ + + Y + + RDL E+ + + + W F + P ++P + + ++ Sbjct: 126 TSLGVLFPVYLNTYHGVRIVDRDLIEMGKVYGMGNWTLFRKVIFPGALPSIFVGLRYALG 185 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W ++ SE I GIG A + ++ A++ + L D ++ Sbjct: 186 IMWLTLIVSESIAASS------GIGHMANNAREFMMTDVVVLALVIYAVLGKLADVIARV 239 Query: 259 LFRPMIVWSNKFR 271 L R ++ W+ ++ Sbjct: 240 LERRLLAWNPVYQ 252 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 81/256 (31%), Gaps = 26/256 (10%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG----------CITM 387 ++++ L V +A W S + + DV W ++ Sbjct: 5 EKLTPYLVPVAIVVFWQLASSAGWISSRIM---PSPADVGLAFWSTMVSGQLPNDVLVSA 61 Query: 388 FRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLN 447 R +++ I +GI G Q+L P PLV+ + Sbjct: 62 GRAFAGLLVGGSIGFLLGIANGVSRISEQLTDTTLQMLRTIPHLAMIPLVILWFGIGEES 121 Query: 448 PNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYV 507 L G + + N G D E+ + + W +R +I PG P Sbjct: 122 K----LFLTSLGVLFPVYLNTYHGVRIVDRDLIEMGKVYGMGNWTLFRKVIFPGALPSIF 177 Query: 508 TGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVL 567 G A G W IVSE + ++G+G + E VVL ++I Sbjct: 178 VGLRYALGIMWLTLIVSESIA------ASSGIGHMANNAREFMMTDVVVLALVIYAVLGK 231 Query: 568 ALN---RFLWHPLYLY 580 + R L L + Sbjct: 232 LADVIARVLERRLLAW 247 >gi|111023807|ref|YP_706779.1| ABC transporter, permease protein [Rhodococcus jostii RHA1] gi|110823337|gb|ABG98621.1| ABC transporter, permease protein [Rhodococcus jostii RHA1] Length = 286 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 14/262 (5%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385 + +++ S + V ++ +V+ F Q + +L Sbjct: 31 PWRSRLVRITSVIAAIVAWQVLTANDVRVWLRFDTLPTVTDVVSAFGTQLQSDLFYLDLG 90 Query: 386 -TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ R++ +A+++ + GI +G + + P +L PA P+ + Sbjct: 91 QSLIRILSGFGLATVVGVATGIALGRSELFADVLGPLTELARPIPAIAVVPVAILLFP-- 148 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + + + + I+ + A P +++ + W ++LPGI P Sbjct: 149 --SDEAGIVFITFVAAFFPIMVSTRHAVRALPTLWEDSVRTLGGGRWDVLSRVVLPGILP 206 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 G G AW I +E+ S G+G ++ +P V +G++ + Sbjct: 207 GVFGGLSVGIGVAWICVISAEMISGR------LGVGYRTWQAYTIVDYPGVFVGMITIGI 260 Query: 565 FVLALN---RFLWHPLYLYGTR 583 A + L + + R Sbjct: 261 LGFATSGAVELLGRRVTRWLPR 282 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 80/208 (38%), Gaps = 17/208 (8%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 ++ +R+LS ++ + +S VL P+ ++ + IP + + ++ F Sbjct: 89 LGQSLIRILSGFGLATVVGVATGIALGRSELFADVLGPLTELARPIPAIAVVPVAILLF- 147 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 E +F F + + + S ++ +P E+ R+ W + Sbjct: 148 -------PSDEAGIVFITFVAAFFPIMVSTRHAVRALPTLWEDSVRTLGGGRWDVLSRVV 200 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P +PG+ + + + W V+++EMI G+G A D + Sbjct: 201 LPGILPGVFGGLSVGIGVAWICVISAEMISG------RLGVGYRTWQAYTIVDYPGVFVG 254 Query: 245 MLTMLGVIFLYD---QLLFRPMIVWSNK 269 M+T+ + F +LL R + W + Sbjct: 255 MITIGILGFATSGAVELLGRRVTRWLPR 282 >gi|1384060|dbj|BAA12840.1| membrane component [Escherichia coli] Length = 275 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+++ + A + IPVGI +G P + + P +L P + Sbjct: 72 MDRTLWQHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 104/253 (41%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77 + + + + L P+ +++ + P +L Q+ + + R++ A+ Sbjct: 33 VLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGFMDRTLWQHLAASLTRIMLALF 92 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 ++LF S + +L PI+++ + +P L +L V++F E + Sbjct: 93 AAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETS 144 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + + S + ++ + ++S S Q W++ +P ++P ++ + Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLR 204 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 + + GW +VA+E+I G+G + A + +L + + + FL + Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLEL 258 Query: 257 --QLLFRPMIVWS 267 + L R + W Sbjct: 259 GLRALQRRLTPWH 271 >gi|126458607|ref|YP_001076166.1| taurine ABC transporter permease [Burkholderia pseudomallei 1106a] gi|242311082|ref|ZP_04810099.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|126232375|gb|ABN95788.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|242134321|gb|EES20724.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] Length = 283 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 91 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 261 AIALALEIGLRALQRRLTPW 280 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 80 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280 >gi|158319355|ref|YP_001511862.1| binding-protein-dependent transport systems inner membrane component [Alkaliphilus oremlandii OhILAs] gi|158139554|gb|ABW17866.1| binding-protein-dependent transport systems inner membrane component [Alkaliphilus oremlandii OhILAs] Length = 302 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 80/226 (35%), Gaps = 21/226 (9%) Query: 364 IGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQ 423 ++ + + + ++ RV++ II + + P+ + +G+ I + + F Sbjct: 67 YNFLHAFDNFIGLGSIPRNIGYSIVRVLLGYIIGASVAFPLALLMGYFKPIRNLCENFIN 126 Query: 424 LLAAFPANVFFPLVVSCVSYYHL----------------NPNLWLSLLMIFGTQWYILFN 467 L P+ + PLV+ L N L + L+ G + I N Sbjct: 127 LFKPIPSIAWQPLVLGWFGISSLARILGMPYGPQFAIMDNFKLSMIFLIALGAFFPIWGN 186 Query: 468 VIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVA 527 +I G + E A + + +I++P P + G +W + +E+ Sbjct: 187 IIFGVTNVRKVLIETAKVLGASQIDIFFHILIPAAGPTIINGMRMGLTASWVCLVSAEML 246 Query: 528 SWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 +G+G I + E V+ G++ + L+ Sbjct: 247 PG-----SMSGVGYLITHAYELARMDLVITGMICIGIIGALLDGVF 287 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 99/230 (43%), Gaps = 22/230 (9%) Query: 58 VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLT 117 + S+P+ + +R+L +I F A L + + + +++ + IP + + Sbjct: 79 LGSIPRNIGYSIVRVLLGYIIGASVAFPLALLMGYFKPIRNLCENFINLFKPIPSIAWQP 138 Query: 118 FTVVYFMNLYPGKVIGA------------ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 + +F +++G +L+ IF I + + ++ + N+ + L Sbjct: 139 LVLGWFGISSLARILGMPYGPQFAIMDNFKLSMIFLIALGAFFPIWGNIIFGVTNVRKVL 198 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 E ++ S F+++ +P + P ++ M M ++ W +V++EM+ + G+ Sbjct: 199 IETAKVLGASQIDIFFHILIPAAGPTIINGMRMGLTASWVCLVSAEMLPG-----SMSGV 253 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI----VWSNKFR 271 G I A + + ++ M+ + + L D +FR +I W NK + Sbjct: 254 GYLITHAYELARMDLVITGMICIGIIGALLDG-VFRIVISKNFSWENKVK 302 >gi|315284931|gb|EFU44376.1| ABC transporter, permease protein [Escherichia coli MS 110-3] Length = 354 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF + Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGANPSQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.1 bits (212), Expect = 2e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGANPSQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|316931755|ref|YP_004106737.1| binding-protein-dependent transporter inner membrane component [Rhodopseudomonas palustris DX-1] gi|315599469|gb|ADU42004.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris DX-1] Length = 278 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 10/194 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 + ++ R+ + A + +P+GI +G + Q L + P+ Sbjct: 79 GEAAKMALPSLARIGGGLAWAIALGVPLGILVGRFKGMRQASSVPFQFLRMISPLAWMPI 138 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V S + N + L+ W ILF+ G + +VA + W Sbjct: 139 AVMAFSSW----NGAIVFLIGVAAIWPILFSTAHGFRRIDPAWFKVARNLGARPWHMLFT 194 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 II+P I + G A G AW + +E T+GLG I ++ + + + Sbjct: 195 IIVPAIMQDSLAGIRLAVGVAWIVLVPAEFLG------VTSGLGYAINDARDTLEYDRLA 248 Query: 557 LGVLIMCCFVLALN 570 V+I+ L+ Sbjct: 249 ATVVIIGLIGFTLD 262 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 75/218 (34%), Gaps = 14/218 (6%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P + + L + A + R+ + ++ L + + + Sbjct: 64 APLPTFERLWSMLVSGEAAKMALPSLARIGGGLAWAIALGVPLGILVGRFKGMRQASSVP 123 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 ++ I L ++ V+ F + A +F I + +W + FS I Sbjct: 124 FQFLRMISPLAWMPIAVMAFSSWNG--------AIVFLIGVAAIWPILFSTAHGFRRIDP 175 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 +V+R+ W + + VP M + + +++ W +V +E + V Sbjct: 176 AWFKVARNLGARPWHMLFTIIVPAIMQDSLAGIRLAVGVAWIVLVPAEFLGV------TS 229 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 G+G I A + + ++ + + F D L R Sbjct: 230 GLGYAINDARDTLEYDRLAATVVIIGLIGFTLDFLCER 267 >gi|17988451|ref|NP_541084.1| taurine transport system permease protein TAUC [Brucella melitensis bv. 1 str. 16M] gi|225686929|ref|YP_002734901.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis ATCC 23457] gi|254702431|ref|ZP_05164259.1| binding-protein-dependent transport systems inner membrane component [Brucella suis bv. 3 str. 686] gi|256042916|ref|ZP_05445862.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis bv. 1 str. Rev.1] gi|256261931|ref|ZP_05464463.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|260564151|ref|ZP_05834636.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|261752994|ref|ZP_05996703.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|265989350|ref|ZP_06101907.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|81850876|sp|Q8YDR8|Y3107_BRUME RecName: Full=Probable ABC transporter permease protein BMEII0107 gi|17984237|gb|AAL53348.1| taurine transport system permease protein tauc [Brucella melitensis bv. 1 str. 16M] gi|225643034|gb|ACO02947.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis ATCC 23457] gi|260151794|gb|EEW86887.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|261742747|gb|EEY30673.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|263000019|gb|EEZ12709.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263091411|gb|EEZ15947.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|326411359|gb|ADZ68423.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis M28] gi|326554648|gb|ADZ89287.1| binding-protein-dependent transport systems inner membrane component [Brucella melitensis M5-90] Length = 246 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 82/234 (35%), Gaps = 10/234 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 +S+ + I + ++ + + + T ++ ++ RV+ ++ Sbjct: 13 LSFAVGIGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVA 72 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IPVG +G+ S I+P+ Q P PL + + ++ Sbjct: 73 LAIPVGFLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGI----DESPKIFVIFLA 128 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 + + G + A + +I+P P+ + G G AW Sbjct: 129 SFLSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWA 188 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + +E+ + +GLG + ++ P + + ++ + L ++R L Sbjct: 189 TVVAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLL 236 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 90/242 (37%), Gaps = 17/242 (7%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + G + G P D+++ L L + R+LS V+ + Sbjct: 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 L R ++ P + + IP L + +V E IF IF + Sbjct: 79 FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGID--------ESPKIFVIFLASF 130 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + YQ + ++ R L +R F + VP S+P ++ + + + W V Sbjct: 131 LSSVVATYQGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATV 190 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMI 264 VA+E+I G+G + A DL I +++T+ + D+LL R + Sbjct: 191 VAAELIA------AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLT 244 Query: 265 VW 266 W Sbjct: 245 QW 246 >gi|163853134|ref|YP_001641177.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] gi|163664739|gb|ABY32106.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium extorquens PA1] Length = 283 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L Q T + + A +L+ A SRR PILD+MQ++P +L + Sbjct: 87 LWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQTLPSFVYLIPAL 146 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +F ++A FA V + + N+P +L E S +F S QK Sbjct: 147 PFFGLG--------AVSACFATIVFSVAPVIRLTALGIRNVPSELVEASDAFGSSATQKL 198 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P ++ + +M VV + MI G G+G + +I+ + A Sbjct: 199 FKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGRAVWQSIQRLEAGA 251 Query: 241 ILYAMLTMLGVIFLYDQL 258 A + ++ V + D++ Sbjct: 252 GFEAGIGIVIVAVILDRV 269 Score = 80.0 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 14/264 (5%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW--QSIGYIV 368 N + L + + + W C+ + IG + Sbjct: 16 NGLDWLTEHGSWLTRAVSRTVSDWIETLTTALVAIPPWLCIAVAAFAAYRAGGRKIGLLT 75 Query: 369 NHFTYQDVLYVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAA 427 +W + T+ V + A +I +PVGIW P ++ Sbjct: 76 LVGLLFLWNLRLWQATVETLVLVTIATAAALVIGVPVGIWFALSRRAWRTFSPILDMMQT 135 Query: 428 FPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFH 487 P+ V+ + ++ + + ++ G P++ E + +F Sbjct: 136 LPSFVYLIPALPFFGLGAVSACFATIVF----SVAPVIRLTALGIRNVPSELVEASDAFG 191 Query: 488 ITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAEST 547 + + + LP P + G A + +++ + G GLG + +S Sbjct: 192 SSATQKLFKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGRAVWQSI 244 Query: 548 EKGSFPEVVLGVLIMCCFVLALNR 571 ++ + + + L+R Sbjct: 245 QRLEAGAGFEAGIGIVIVAVILDR 268 >gi|54024090|ref|YP_118332.1| putative ABC transporter permease [Nocardia farcinica IFM 10152] gi|54015598|dbj|BAD56968.1| putative ABC transporter permease [Nocardia farcinica IFM 10152] Length = 262 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 81/200 (40%), Gaps = 10/200 (5%) Query: 373 YQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + ++ ++++R+V+ ++IA + +P+G+ +G + P Q L Sbjct: 62 LHERGVLLPDIGVSLWRLVLGLLIAVTVGVPLGLLLGLHAATEHALAPVVQFLRMISPLS 121 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + P+ V+ + ++ W I+ N AG A VA SF T Sbjct: 122 WAPIAVALFGIGNQPVVFLVAAAA----VWPIVLNTAAGVRAIDPGLLLVARSFGATRRE 177 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++LP + +G A G AW + +E+ +GLG I + ++ ++ Sbjct: 178 QLTAVVLPAVRGPVQSGLRIALGIAWVVLVPAEMLG------VRSGLGYQILNARDQLAY 231 Query: 553 PEVVLGVLIMCCFVLALNRF 572 +V+ ++++ L+ Sbjct: 232 DQVMAVIVVIGALGFVLDGL 251 Score = 95.4 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 76/215 (35%), Gaps = 14/215 (6%) Query: 44 VPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPI 103 P+ + + + L + R++ ++I++ L L P+ Sbjct: 51 GPQHVPGALHALHERGVLLPDIGVSLWRLVLGLLIAVTVGVPLGLLLGLHAATEHALAPV 110 Query: 104 LDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPR 163 + ++ I L + V F V A VW + + + I Sbjct: 111 VQFLRMISPLSWAPIAVALFGIGNQPVVFLVAAA--------AVWPIVLNTAAGVRAIDP 162 Query: 164 DLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLP 223 L V+RSF + ++ + +P + + +++ W +V +EM+ V Sbjct: 163 GLLLVARSFGATRREQLTAVVLPAVRGPVQSGLRIALGIAWVVLVPAEMLGV------RS 216 Query: 224 GIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 G+G I A + ++ ++ + + F+ D L Sbjct: 217 GLGYQILNARDQLAYDQVMAVIVVIGALGFVLDGL 251 >gi|298487238|ref|ZP_07005287.1| inner membrane component of a binding-protein-dependent transport system [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158262|gb|EFH99333.1| inner membrane component of a binding-protein-dependent transport system [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 277 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 17/199 (8%) Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 SR L P ++SIP L ++ +++ KV+ + A F + Sbjct: 93 GLGICAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSKVVLIAIGAFFPV 152 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + ++ I R L EV + + S ++ + +P ++PGL + MS Sbjct: 153 Y--------LNGVAAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALPGLFTGLRSGMSL 204 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF-- 260 W F+VA+E+I G+G ++ + +L A++ + + L D LL Sbjct: 205 SWMFLVAAELIA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLLAGL 258 Query: 261 -RPMIVWSNKFRLERTTGI 278 + + W + F + G Sbjct: 259 EKRFLAWRDTFTGQSREGR 277 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 65/167 (38%), Gaps = 10/167 (5%) Query: 407 WIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILF 466 W+G + ++P L + P+ + PL++ + + +L+ G + + Sbjct: 99 WVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIGETSK----VVLIAIGAFFPVYL 154 Query: 467 NVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEV 526 N +A EV + + +R R I+LP P TG + +W + +E+ Sbjct: 155 NGVAAIRGIDRKLVEVGKMYGFSRYRLTRRILLPAALPGLFTGLRSGMSLSWMFLVAAEL 214 Query: 527 ASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 + T GLG +++ E V+ ++++ + L Sbjct: 215 IA------ATKGLGYLLSDGRETSRPDIVLAAIIVLATLGKLSDGLL 255 >gi|281179685|dbj|BAI56015.1| glycine/betaine/proline ABC transporter permease component [Escherichia coli SE15] Length = 354 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIIRLTILGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 100 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 160 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIIRLTILGINQVPADLIEASRSFGASPSQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|88800578|ref|ZP_01116140.1| putative permease [Reinekea sp. MED297] gi|88776723|gb|EAR07936.1| putative permease [Reinekea sp. MED297] Length = 295 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 102/232 (43%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L+IGII + + + V I + + + + + +T + ++S++ Sbjct: 62 LMIGIILGITYFAARSIKLTIGVGISLLLIGIFGMWEDTMQTLSIITVCTLLSIVLGVPI 121 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 AKS R+ V+ PILD+MQ++P +L V+ GK+ G I+AI Sbjct: 122 GIAMAKSNRIQSVITPILDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 175 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + +++ E + ++ ++ WQ+ W + +P +MP ++ + ++ Sbjct: 176 --PVIRLTNLGIRLVDKEVLEAADAYGVTPWQRLWNVQLPLAMPNIMAGINQTIMMALAM 233 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + +I Q + ++ + ++D++ Sbjct: 234 VVIASMIGV-------KGLGQPVLQSITNQYFTQGVLNGAAIVVLAIIFDRV 278 Score = 80.4 bits (197), Expect = 8e-13, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 100/286 (34%), Gaps = 19/286 (6%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSY--MLDIFWFCV 351 +L S + + + R ENF + V + +L + + Sbjct: 3 WLTEFPQLSRRDLLTIRKTLDEAYREFSRNYGEAIENFFDPLLSFLVWFEDLLIATPWWL 62 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVG 405 + G+ +GI + + I L +I + + T+ + V +++ ++ +P+G Sbjct: 63 MIGIILGITYFAARSIKLTIGVGISLLLIGIFGMWEDTMQTLSIITVCTLLSIVLGVPIG 122 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 I + I S I P ++ PA V+ VV + + + ++ ++ Sbjct: 123 IAMAKSNRIQSVITPILDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIYAIPPVI 178 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 G + E A ++ +T W+ + LP P + G A +++ Sbjct: 179 RLTNLGIRLVDKEVLEAADAYGVTPWQRLWNVQLPLAMPNIMAGINQTIMMALAMVVIAS 238 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + GLG + +S F + VL + + +R Sbjct: 239 MIG-------VKGLGQPVLQSITNQYFTQGVLNGAAIVVLAIIFDR 277 >gi|311280742|ref|YP_003942973.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] gi|308749937|gb|ADO49689.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] Length = 275 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 103/271 (38%), Gaps = 19/271 (7%) Query: 319 TLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQ 374 +R+ +P + S + +L +W + + Q + +V+ Q Sbjct: 10 RRQALRWRWPLSRQLTLSAATLGVILLAWWTVAGLQLIAPLFLPPPGQVLRKLVSIAGAQ 69 Query: 375 DVLYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANV 432 + ++ R+V+ ++ A++I +PVGI +G P + + P +L P Sbjct: 70 GFMDATLWQHLGASLTRIVIALLAATVIGVPVGIAMGLSPTVRGILDPLIELYRPVPPLA 129 Query: 433 FFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWR 492 + PL+V + LL+ + + +AG + A S + + Sbjct: 130 YLPLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSVQQVRLRAAQSLGASRAQ 185 Query: 493 WWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSF 552 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 186 ILWFVILPGALPDILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAT 239 Query: 553 PEVVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 240 DVVLAGIAVIAAIAFVLELSLRALQRRLTPW 270 Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 99/253 (39%), Gaps = 22/253 (8%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIV-----PITLDVHSLPQYASRTTLRMLSAMV 77 + + + + L P ++ + +L Q+ + R++ A++ Sbjct: 33 VILLAWWTVAGLQLIAPLFLPPPGQVLRKLVSIAGAQGFMDATLWQHLGASLTRIVIALL 92 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 + + S + +L P++++ + +P L +L V++F E + Sbjct: 93 AATVIGVPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIG--------ETS 144 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I+ + + S + ++ + ++S S Q W++ +P ++P ++ + Sbjct: 145 KILLIYLAIFAPVAMSALAGVKSVQQVRLRAAQSLGASRAQILWFVILPGALPDILTGLR 204 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 + + GW +VA+E+I G+G + A + +L + + + F+ + Sbjct: 205 IGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAAIAFVLEL 258 Query: 257 --QLLFRPMIVWS 267 + L R + W Sbjct: 259 SLRALQRRLTPWH 271 >gi|33594538|ref|NP_882182.1| ABC transport system permease protein [Bordetella pertussis Tohama I] gi|33564614|emb|CAE43932.1| ABC transport system permease protein [Bordetella pertussis Tohama I] gi|332383949|gb|AEE68796.1| ABC transport system permease protein [Bordetella pertussis CS] Length = 256 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 72/200 (36%), Gaps = 10/200 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + ++ + RV+V A+ + IP+GI++G + P L P+ + Sbjct: 55 WEQGSLLDHIVASARRVMVGFAAATALAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSW 114 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + ++ GT L VI AS+ +G + Sbjct: 115 IPLSLLWFGITETQKYS----IVFMGTFAPALLYVIEATRNIDPLLIRAASNLGASGPQV 170 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R +ILP P +G G +W I +E+ + GLG I E Sbjct: 171 MRSVILPASLPQIFSGFKVILGLSWTCVISAELVA------AKEGLGFLIMNGKEFFQTD 224 Query: 554 EVVLGVLIMCCFVLALNRFL 573 VVLG+ ++ VL + Sbjct: 225 TVVLGMALISVTVLVTDVVF 244 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 87/249 (34%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 ++ + + + P D+ + + SL + + R++ + Sbjct: 21 IVLLLFWEAVCRLQWVDALFLPPPSDVFARIGNMWEQGSLLDHIVASARRVMVGFAAATA 80 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S+R PIL ++ +P + ++ ++++F K Sbjct: 81 LAIPLGIFLGTSQRARAAFDPILSFLRPLPSMSWIPLSLLWFGITETQKYS--------I 132 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 +F + ++ NI L + + SG Q + +P S+P + + + Sbjct: 133 VFMGTFAPALLYVIEATRNIDPLLIRAASNLGASGPQVMRSVILPASLPQIFSGFKVILG 192 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W V+++E++ + G+G I + ++ M + + + D ++ Sbjct: 193 LSWTCVISAELVAAKE------GLGFLIMNGKEFFQTDTVVLGMALISVTVLVTDVVFRI 246 Query: 259 LFRPMIVWS 267 + ++ WS Sbjct: 247 IENRVLAWS 255 >gi|217425152|ref|ZP_03456647.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217391757|gb|EEC31784.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 285 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 152 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 153 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 208 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 209 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 262 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 263 AIALALEIGLRALQRRLTPW 282 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 82 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 141 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 142 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 193 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 194 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 247 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 248 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 282 >gi|254185129|ref|ZP_04891718.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|184215721|gb|EDU12702.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 283 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 91 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 261 AIALALEIGLRALQRRLTPW 280 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 80 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280 >gi|300924083|ref|ZP_07140077.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|301330780|ref|ZP_07223378.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|300419679|gb|EFK02990.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300843293|gb|EFK71053.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|320201610|gb|EFW76186.1| Taurine transport system permease protein TauC [Escherichia coli EC4100B] Length = 275 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPLQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWTVAALQLISPLFLPPLQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|261415486|ref|YP_003249169.1| binding-protein-dependent transport systems inner membrane component [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371942|gb|ACX74687.1| binding-protein-dependent transport systems inner membrane component [Fibrobacter succinogenes subsp. succinogenes S85] Length = 254 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 10/196 (5%) Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ ++ ++V A+++ I +GI G P + + ++P ++ A P NV+ P Sbjct: 55 ELLRSAWSSLLKLVPAYFAAAVVGISLGIVSGSVPWVGTMLKPISRFAAPIPPNVYIPYA 114 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 ++ + ++L+ + ++ W I N AGA+ P ++ A+ I + + I Sbjct: 115 IAILPTFYLS----STFIIFIAAFWPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRI 170 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 P +G G ++ V+E+ TGLG ++ + +P +V Sbjct: 171 AFVASLPSIFSGLSVGMGLSFIMLTVAELFG------ENTGLGHFVQFYADYSDYPNMVA 224 Query: 558 GVLIMCCFVLALNRFL 573 G+L VLA+ F Sbjct: 225 GILWTGIVVLAIMEFF 240 Score = 93.5 bits (231), Expect = 9e-17, Method: Composition-based stats. Identities = 30/228 (13%), Positives = 76/228 (33%), Gaps = 14/228 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + I+ + P + + L + A + L+++ A + + Sbjct: 23 IWTFISSGPEWSSQYLFPSPKAVLTALFNSREELLRSAWSSLLKLVPAYFAAAVVGISLG 82 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 ++ +G +L PI IP ++ + + Y L++ F IF + Sbjct: 83 IVSGSVPWVGTMLKPISRFAAPIPPNVYIPYAIAILPTFY--------LSSTFIIFIAAF 134 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 W + + +IP + + ++ W + S+P + + + M + + Sbjct: 135 WPIYLNTAAGAADIPEKYRRNAAIIGIGRFEYLWRIAFVASLPSIFSGLSVGMGLSFIML 194 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLY 255 +E+ G+G ++ D ++ +L V+ Sbjct: 195 TVAELFGENT------GLGHFVQFYADYSDYPNMVAGILWTGIVVLAI 236 >gi|52549512|gb|AAU83361.1| sulfonate ABC transporter permease protein [uncultured archaeon GZfos27E7] Length = 264 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 88/246 (35%), Gaps = 18/246 (7%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSL----PQYASRTTLRMLSAMVIS 79 A L +I + P + + L L P + L + Sbjct: 18 AISLCAAVIIWEIVADFIIRNPIKLPSPYAVFLSYLKLWEIIPGDIGISLLHFGIGLGAG 77 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L R L P+++I++ IP L ++ F +++ AA Sbjct: 78 AAVGITVGMLMGWFRVANRALDPMVEILRPIPPLAWVPFAILW--------GGLTHCAAG 129 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWY-LGVPFSMPGLVWNMMM 198 F +F + + + Y + + + ++ +K + PFS+P + + + Sbjct: 130 FIVFIGAFFPILLNTYTGFREVDKTYIDAAKVLGCKEERKMIKSVAFPFSLPYIATGIRI 189 Query: 199 SMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 M GW VVA+EM V + G+G + ++ L A + +LG++ L Sbjct: 190 GMGVGWMCVVAAEMFGVSKS-----GLGFRLFQVFWPLHMIDRLVAYMIILGLVALVLDH 244 Query: 259 LFRPMI 264 LFR + Sbjct: 245 LFRYFV 250 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 14/213 (6%) Query: 376 VLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 + I++ + + + + I VG+ +G+ + + P ++L P + P Sbjct: 56 WEIIPGDIGISLLHFGIGLGAGAAVGITVGMLMGWFRVANRALDPMVEILRPIPPLAWVP 115 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT-GWRWW 494 + H ++ G + IL N G + + A + Sbjct: 116 FAILWGGLTH----CAAGFIVFIGAFFPILLNTYTGFREVDKTYIDAAKVLGCKEERKMI 171 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE-STEKGSFP 553 + + P PY TG G W + +E+ + +GLG + + Sbjct: 172 KSVAFPFSLPYIATGIRIGMGVGWMCVVAAEMFG-----VSKSGLGFRLFQVFWPLHMID 226 Query: 554 EVVLGVLIMCCFVLALNRFLWHPLYLYGTRCLR 586 +V ++I+ L L+ Y R L+ Sbjct: 227 RLVAYMIILGLVALVLDHLFR---YFVEERLLK 256 >gi|289208151|ref|YP_003460217.1| binding-protein-dependent transporters inner membrane component [Thioalkalivibrio sp. K90mix] gi|288943782|gb|ADC71481.1| binding-protein-dependent transport systems inner membrane component [Thioalkalivibrio sp. K90mix] Length = 279 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 92/270 (34%), Gaps = 17/270 (6%) Query: 307 SPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGY 366 + ++ L R L +R ++ + ++W+ +A + Sbjct: 5 ATMNELNPALERMLPFLRLADQVRRRVQYPAVGIAGLFALWWWGGWL-IANNEDTMAFAS 63 Query: 367 IVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQP 420 T ++ G + +++RV + A I +P+G+ IG+ + Sbjct: 64 FAPGPTLTAFWDLVSSGNVWKPIESSLYRVGWGLFYAIAIGVPLGVMIGYFLTLKQITHV 123 Query: 421 FAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFK 480 Q L + P+ V + + L+ W I + G + Sbjct: 124 PFQFLRMISPLAWMPIAVLAFATWDG----ASIFLIAIAAIWPITYATAHGVQRIDPMWL 179 Query: 481 EVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLG 540 +V S+ RYI++P I G A G AW + +E T+GLG Sbjct: 180 KVGSNLGANPIHTLRYIVMPAIAQDVFAGIRLAVGVAWIVLVPAEYLG------VTSGLG 233 Query: 541 AYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 I ++ + + ++ VL++ L+ Sbjct: 234 YAINDARDTLEYDKLAAFVLVIGIIGYMLD 263 Score = 94.6 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 88/266 (33%), Gaps = 19/266 (7%) Query: 1 MFLYNILPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTV-----PRDIVDIVPIT 55 M + L + RR+ + + L+ ++T P + Sbjct: 17 MLPFLRLADQVRRRVQYPAVGIAGLFALWWWGGWLIANNEDTMAFASFAPGPTLTAFWDL 76 Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 + ++ + + R+ + ++ + L + ++ I L + Sbjct: 77 VSSGNVWKPIESSLYRVGWGLFYAIAIGVPLGVMIGYFLTLKQITHVPFQFLRMISPLAW 136 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 + V+ F A+IF I + +W +T++ + I +V + + Sbjct: 137 MPIAVLAFATWDG--------ASIFLIAIAAIWPITYATAHGVQRIDPMWLKVGSNLGAN 188 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 Y+ +P + + +++ W +V +E + V G+G I A Sbjct: 189 PIHTLRYIVMPAIAQDVFAGIRLAVGVAWIVLVPAEYLGV------TSGLGYAINDARDT 242 Query: 236 QDLLAILYAMLTMLGVIFLYDQLLFR 261 + + +L + + ++ D + R Sbjct: 243 LEYDKLAAFVLVIGIIGYMLDAICVR 268 >gi|260459647|ref|ZP_05807901.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gi|259034449|gb|EEW35706.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 257 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 96/244 (39%), Gaps = 23/244 (9%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------------CIT 386 + + AW ++G VN D L ++ G IT Sbjct: 8 APGLRTVLGISFFVLFVAFWAWITLGGHVNRIFLADPLSMLRDGWRLLVEDRFWLDILIT 67 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 ++RV ++AS++ +P+GI +G + + ++PF PA+ F PL++ L Sbjct: 68 IWRVFGGFVLASVVAVPIGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGEL 127 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 L++ G+ + I+ + + D E A + T + +I+P P Sbjct: 128 EK----LLVIFVGSVFQIILIIAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPANAPEI 183 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 G AW IV+E+ ++G+G I S + + +++ G++++ Sbjct: 184 AETLRLVLGWAWTYVIVAELIG------SSSGIGYMIINSQSRLATGQIIFGIIVIGLIG 237 Query: 567 LALN 570 L + Sbjct: 238 LLSD 241 Score = 85.4 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 15/199 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T R+ V++ + + + L P + + +P F+ +++ Sbjct: 67 TIWRVFGGFVLASVVAVPIGIAMGAWKPVEAFLEPFVSFARYLPASAFIPLLILWAGIG- 125 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 EL + IF V+ + + + + RDL E + + + + +P Sbjct: 126 -------ELEKLLVIFVGSVFQIILIIAVKVGSTRRDLVEAAYTLGSTNNGIVKRVIMPA 178 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 + P + + + + W +V+ +E+I GIG I + I++ ++ Sbjct: 179 NAPEIAETLRLVLGWAWTYVIVAELIGSSS------GIGYMIINSQSRLATGQIIFGIIV 232 Query: 248 MLGVIFLYDQLLFRPMIVW 266 + + L D F+ W Sbjct: 233 IGLIGLLSD-FAFKAFNRW 250 >gi|239627742|ref|ZP_04670773.1| transport protein [Clostridiales bacterium 1_7_47_FAA] gi|239517888|gb|EEQ57754.1| transport protein [Clostridiales bacterium 1_7_47FAA] Length = 280 Score = 118 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 10/196 (5%) Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 D + ++ + ++ ++I IP+GI + + I + P L+ P + Sbjct: 77 PDSGTLFQHILASLKVALSGYVLGAVIGIPLGICMAWFKRIDLFVTPLFDLVRPVPTIAW 136 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL++ + ++ + N AG VA +F + + Sbjct: 137 IPLMILWFGIGLG----AKAAIIFVSAFIPCVINSYAGIKQTKPVHLWVAQTFGASRTKM 192 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + +P P TG + AW +E+ + GLG I + Sbjct: 193 LFTVAIPTAMPLIFTGLRISLQAAWTTLCAAEMLA------ANKGLGYMIQLNRSLARAD 246 Query: 554 EVVLGVLIMCCFVLAL 569 +++G+L + Sbjct: 247 LIIVGMLTIGFIGTIF 262 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 102/247 (41%), Gaps = 21/247 (8%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDI-------VDIVPITLDVHSLPQYASRTTLRMLS 74 L+ F + + +LH + + ++P + + D +L Q+ + LS Sbjct: 36 LVMFFGIWYLATAVLHLMPDYSLPSPVQVLEAFIYKLNHKAPDSGTLFQHILASLKVALS 95 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 V+ + A +R+ + + P+ D+++ +P + ++ +++F G +GA Sbjct: 96 GYVLGAVIGIPLGICMAWFKRIDLFVTPLFDLVRPVPTIAWIPLMILWF-----GIGLGA 150 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 + A IF S + Y + V+++F S + + + +P +MP + Sbjct: 151 KAAIIFV---SAFIPCVINSYAGIKQTKPVHLWVAQTFGASRTKMLFTVAIPTAMPLIFT 207 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + +S+ W + A+EM+ G+G I L I+ MLT+ + + Sbjct: 208 GLRISLQAAWTTLCAAEMLAANK------GLGYMIQLNRSLARADLIIVGMLTIGFIGTI 261 Query: 255 YDQLLFR 261 + +L + Sbjct: 262 FAVVLTK 268 >gi|126447555|ref|YP_001077898.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126240409|gb|ABO03521.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] Length = 283 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 91 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 261 AIALALEIGLRALQRRLTPW 280 Score = 111 bits (278), Expect = 4e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 80 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280 >gi|146305523|ref|YP_001185988.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] gi|145573724|gb|ABP83256.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] Length = 294 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 104/244 (42%), Gaps = 22/244 (9%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + P + L+A + +G+ I + T V ++ + + T S Sbjct: 46 MLPPAWLLIAIFVGLGLWRIGMRFAVFTAVAFILIVMT-------GFWEQTVVTLGLTFS 98 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 + +ISLL AAKS R+ ++ P+LD MQ++P +L + F G+V G Sbjct: 99 STLISLLLGIPLGIWAAKSERVATIIRPVLDFMQTMPAFVYLIPAAMLFGL---GRVPGI 155 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 IFA+ + + + +++ E +SF + Q + + +P +MP ++ Sbjct: 156 IATVIFAMPPA-----VRLTSLGIRQVNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIMA 210 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++ V+ + M+ G G+G+ + +I+ D+ + + ++ + + Sbjct: 211 GVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGMAVVLLAII 263 Query: 255 YDQL 258 D++ Sbjct: 264 LDRI 267 Score = 75.0 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 ++ + +G+ IG FT + ++ G +T+ +I+ ++ IP+G Sbjct: 52 LLIAIFVGLGLWRIGMRFAVFTAVAFILIVMTGFWEQTVVTLGLTFSSTLISLLLGIPLG 111 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW +++ I+P + PA V+ + + + + Sbjct: 112 IWAAKSERVATIIRPVLDFMQTMPAFVYLIPAAMLFGLGRVPGIIATVIFAMPPAVRL-- 169 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 G + E SF T + + LP P + G A + I++ Sbjct: 170 --TSLGIRQVNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIMAGVNQTIMMALSMVIIAS 227 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + S ++ + + + L+R Sbjct: 228 MVGAG-------GLGNDVLASIQRLDIGLGFESGMAVVLLAIILDRI 267 >gi|290476212|ref|YP_003469112.1| glycine/betaine/proline ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289175545|emb|CBJ82348.1| glycine/betaine/proline transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 364 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 15/181 (8%) Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +L A A + R+ ++ P+LD MQ+ P +L V+ F G V G + Sbjct: 153 FCILIGLPLAIWLAHNERVARIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVMVT 209 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 IFA + + + +P DL E ++SF S Q + + +P +MP ++ + Sbjct: 210 IIFA-----LPPIVRLTILGIKQVPADLIEAAQSFGASPRQMLFKVQLPLAMPTIMAGVN 264 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 ++ VV + MI VG G+G + I D+ ++ + + D+ Sbjct: 265 QTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDIGLAAVGGAGIVILAIILDR 317 Query: 258 L 258 L Sbjct: 318 L 318 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 85/227 (37%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 V + +AWQ G + ++ ++ + +G IT+ V+ ++ +I +P+ Sbjct: 103 VTILIFALLAWQLTGAGMGVTSFISLILIGAIGAWSEAMITLALVLTALLFCILIGLPLA 162 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW+ ++ ++P + PA V+ +V N+ ++ I I+ Sbjct: 163 IWLAHNERVARIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVMVTIIFALPPIV 218 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 I G P D E A SF + + + LP P + G A + +++ Sbjct: 219 RLTILGIKQVPADLIEAAQSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIAS 278 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + G GLG + + +G + + L+R Sbjct: 279 MIAVG-------GLGQMVLRGIGRLDIGLAAVGGAGIVILAIILDRL 318 >gi|83716597|ref|YP_438999.1| taurine ABC transporter permease [Burkholderia thailandensis E264] gi|167615544|ref|ZP_02384179.1| taurine ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257142105|ref|ZP_05590367.1| taurine ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83650422|gb|ABC34486.1| taurine ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 283 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 88/255 (34%), Gaps = 13/255 (5%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMF 388 L S + L + V + G +V D + ++ Sbjct: 36 AAALATWSALVAGWWLAARFEWVSAALLPGPEAVLRKLVVLSTEGFDDATLGQHLLASLA 95 Query: 389 RVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNP 448 R+ +A + IP G+ I + + P + P + PL+V + Sbjct: 96 RITTAFALALVTAIPAGVLIATNRIVRGAVDPIVEFYRPIPPLAYLPLMVVWFGIGDASK 155 Query: 449 NLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVT 508 L + L M + AGAS A+S T + +++LP P +T Sbjct: 156 VLLIYLTMFA----PLAIATAAGASGVSESRLRAAASLGATRLKLLCHVVLPSALPDILT 211 Query: 509 GAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLA 568 G A G W+ + +E+ + T GLG + ++ V+ G+L++ +A Sbjct: 212 GVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIGAIAIA 265 Query: 569 LN---RFLWHPLYLY 580 L R L L + Sbjct: 266 LEIGLRALQRRLTPW 280 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L Q+ + R+ +A ++L+ L A +R + + PI++ + IP L Sbjct: 80 GFDDATLGQHLLASLARITTAFALALVTAIPAGVLIATNRIVRGAVDPIVEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F KV+ I+ + + + + + S Sbjct: 140 YLPLMVVWFGIGDASKVL--------LIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + + ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRLKLLCHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIAIALEIGLRALQRRLTPW 280 >gi|115360505|ref|YP_777642.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] gi|115285833|gb|ABI91308.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria AMMD] Length = 295 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 16/239 (6%) Query: 21 DLLAFVLVIGIINILLHGIQETTVPRDI-VDIVPITLDVHSLPQYASRTTLRMLSAMVIS 79 L A + ++ ++ + + I V + + + L T + +A S Sbjct: 42 GLAAVPFIAMVVILVGLALWRRGIAFSIFVGLALLVIHYMGLWAQTVSTLALVTAATFFS 101 Query: 80 LLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAI 139 L+ A++ R+GM+L +LD MQ++P +L V+ F + A+ Sbjct: 102 LVIGVPLGIWGARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLG--------RVPAV 153 Query: 140 FAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMS 199 A + + + + +L E RSF + WQ W + +P ++P ++ + + Sbjct: 154 IATIVFAMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQT 213 Query: 200 MSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 + VV + MI G G+G Y+ I+ D+ L ++ + + D+L Sbjct: 214 IMMALSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 L F + + +G+A G + F +L + ++G T+ V + Sbjct: 42 GLAAVPFIAMVVILVGLALWRRGIAFSIFVGLALLVIHYMGLWAQTVSTLALVTAATFFS 101 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW I ++ + PA V+ V + + + Sbjct: 102 LVIGVPLGIWGARNNRIGMILRSLLDFMQTMPAFVYLIPAVILFGLGRVPAVIATIVF-- 159 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 ++ G + E SF T W+ I LP P + G A Sbjct: 160 --AMPPVVRLTTLGIRQVREELIEAGRSFGSTDWQLLWKIQLPNALPSIMAGVNQTIMMA 217 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +V+ + G GLG Y+ ++ G L + + L+R Sbjct: 218 LSMVVVASMIGAG-------GLGEYVLSGIQRLDIGIGFEGGLGVVLLAIVLDRL 265 >gi|237730897|ref|ZP_04561378.1| alkanesulfonate transporter permease subunit [Citrobacter sp. 30_2] gi|226906436|gb|EEH92354.1| alkanesulfonate transporter permease subunit [Citrobacter sp. 30_2] Length = 263 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 92/248 (37%), Gaps = 23/248 (9%) Query: 336 SNQRVSYMLDIF-WFCVVCGVAIGIAWQSIGYIVNHF--TYQDVLYVIWLG--------- 383 + + ++L + WF V VA+ S+G++ + + V+ W Sbjct: 2 ATPKNRWLLRLAPWFLPVGLVALWQLASSMGWLSTRILPSPEGVIEAFWTLSASGELWQH 61 Query: 384 -CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVS 442 I+ +R ++ I I + +G+ G + Q+L P PLV+ Sbjct: 62 LAISSWRALIGFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFG 121 Query: 443 YYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGI 502 L+ GT + I N G + E+A S+ ++G+ + ++ILPG Sbjct: 122 I----DESAKIFLVALGTLFPIYINTWHGIRSIDRGLVEMARSYGLSGFSLFVHVILPGA 177 Query: 503 FPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIM 562 P + G A G W IV+E S G+G + E VV+ +++ Sbjct: 178 LPSIMVGVRFALGLMWLTLIVAETIS------ANAGIGYLAMNAREFLQTDVVVVAIILY 231 Query: 563 CCFVLALN 570 + Sbjct: 232 ALLGKLAD 239 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 107/265 (40%), Gaps = 18/265 (6%) Query: 16 FPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 F + V + + + + + P +++ L Q+ + ++ R L Sbjct: 12 LAPWFLPVGLVALWQLASSMGWLSTRILPSPEGVIEAFWTLSASGELWQHLAISSWRALI 71 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 I ++ SR +L + +++++P L + +++F Sbjct: 72 GFSIGGSIGLTLGLISGLSRWGERLLDTSVQMLRNVPHLALIPLVILWFGID-------- 123 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 E A IF + ++ + + + + +I R L E++RS+ LSG+ F ++ +P ++P ++ Sbjct: 124 ESAKIFLVALGTLFPIYINTWHGIRSIDRGLVEMARSYGLSGFSLFVHVILPGALPSIMV 183 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++ W ++ +E I GIG A + ++ A++ + L Sbjct: 184 GVRFALGLMWLTLIVAETISANA------GIGYLAMNAREFLQTDVVVVAIILYALLGKL 237 Query: 255 YD---QLLFRPMIVWSNKFRLERTT 276 D QLL R + W + ++ T Sbjct: 238 ADVSAQLLERVWLRWHPAYHVKEAT 262 >gi|304405136|ref|ZP_07386796.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] gi|304346015|gb|EFM11849.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus curdlanolyticus YK9] Length = 306 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 23/257 (8%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPIT------LDVHSLPQYASRTTLRMLSAMV 77 A + VI + L G + P + + I L L ++ + R + Sbjct: 63 ALLPVIALAVWQLAGERGWISPTFLPTPIAIAEAFGKLLLSGELLRHLGVSIGRAATGFA 122 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 I + + RR +L P L +++ +P L +++F E++ Sbjct: 123 IGGSLGLLLGLVTGLFRRAEYLLDPSLQLLRLVPHLAIAPLIILWFG--------FGEVS 174 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 + I T + + + + + N+ L EV+R + S + L VP ++P L + Sbjct: 175 KVVIIMTGAFFPLYINTFLGIRNVDARLFEVARVLQFSWRTRITKLIVPAALPELFIGLR 234 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD- 256 +S++ W +V +E+I G+G I LA +E D I +L V L D Sbjct: 235 LSLAVAWIGLVVAELIG------ATSGVGFLINLAKQESDTSTIFVGILIFAIVGKLIDS 288 Query: 257 --QLLFRPMIVWSNKFR 271 +LL R + W + ++ Sbjct: 289 LVRLLERKWLFWRDSYQ 305 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 84/265 (31%), Gaps = 17/265 (6%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQD 375 R V+ + L V +A W S ++ + Sbjct: 36 APRDKRVVDEKASGRSNRSVVTDAALGALLPVIALAVWQLAGERGWISPTFLPTPIAIAE 95 Query: 376 VLYVIWLGC-------ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + L +++ R I + + +G+ G + P QLL Sbjct: 96 AFGKLLLSGELLRHLGVSIGRAATGFAIGGSLGLLLGLVTGLFRRAEYLLDPSLQLLRLV 155 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P PL++ + ++ ++++ G + + N G EVA Sbjct: 156 PHLAIAPLIILWFGFGEVSK----VVIIMTGAFFPLYINTFLGIRNVDARLFEVARVLQF 211 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + +I+P P G + AW +V+E+ T+G+G I + + Sbjct: 212 SWRTRITKLIVPAALPELFIGLRLSLAVAWIGLVVAELIG------ATSGVGFLINLAKQ 265 Query: 549 KGSFPEVVLGVLIMCCFVLALNRFL 573 + + +G+LI ++ + Sbjct: 266 ESDTSTIFVGILIFAIVGKLIDSLV 290 >gi|194428846|ref|ZP_03061381.1| taurine uptake ABC transporter, permease protein [Escherichia coli B171] gi|194413149|gb|EDX29436.1| taurine uptake ABC transporter, permease protein [Escherichia coli B171] Length = 275 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 102/269 (37%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ + A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALRAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 102/249 (40%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A+ +++ Sbjct: 37 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALRAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|124382344|ref|YP_001025815.1| taurine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|238563141|ref|ZP_00439365.2| taurine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|251767713|ref|ZP_02268181.2| taurine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254176599|ref|ZP_04883257.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254201032|ref|ZP_04907397.1| taurine ABC transporter, permease protein [Burkholderia mallei FMH] gi|254204997|ref|ZP_04911350.1| taurine ABC transporter, permease protein [Burkholderia mallei JHU] gi|254359116|ref|ZP_04975388.1| taurine ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|147748644|gb|EDK55719.1| taurine ABC transporter, permease protein [Burkholderia mallei FMH] gi|147754583|gb|EDK61647.1| taurine ABC transporter, permease protein [Burkholderia mallei JHU] gi|148028303|gb|EDK86263.1| taurine ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|160697641|gb|EDP87611.1| taurine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|238521308|gb|EEP84761.1| taurine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|243061954|gb|EES44140.1| taurine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|261826754|gb|ABM99472.2| taurine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] Length = 285 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 152 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 153 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 208 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 209 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 262 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 263 AIALALEIGLRALQRRLTPW 282 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 82 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 141 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 142 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 193 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 194 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 247 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 248 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 282 >gi|121593479|ref|YP_985375.1| binding-protein-dependent transport systems inner membrane component [Acidovorax sp. JS42] gi|120605559|gb|ABM41299.1| binding-protein-dependent transport systems inner membrane component [Acidovorax sp. JS42] Length = 400 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 24/264 (9%) Query: 3 LYNILPPFISRR-----IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLD 57 + N P F + R + DLL V +I ++ + R + ++L Sbjct: 104 VENFRPFFQAVRAPIDATLTGVTDLLLAVPAPALIALVTLLAWQFAG-RGLAVGAALSLG 162 Query: 58 VHSLPQ---YASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 + +L A T +L++++ ++ + A S R P+LD MQ+ P Sbjct: 163 LVALLGIWPDAMVTLALVLTSLLFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFV 222 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L V+ F G V G + +FA + + L + DL E SR++ Sbjct: 223 YLVPVVMLFG---IGNVPGVIVTIVFA-----LPPLVRLTNLGLRQVRPDLIEASRAYGA 274 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 S Q W + +P +MP ++ + ++ VV + MI VG G+G + I Sbjct: 275 SPLQLLWKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVG-------GLGQMVLRGIG 327 Query: 235 EQDLLAILYAMLTMLGVIFLYDQL 258 D+ L ++ + + D+L Sbjct: 328 RLDMGLATVGGLGIVLLAIVLDRL 351 Score = 83.4 bits (205), Expect = 1e-13, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 82/238 (34%), Gaps = 16/238 (6%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVN-----HFTYQDVLYVIWLGCITMFRVVVLI 394 V+ +L + + +AWQ G + +L + +T+ V+ + Sbjct: 125 VTDLLLAVPAPALIALVTLLAWQFAGRGLAVGAALSLGLVALLGIWPDAMVTLALVLTSL 184 Query: 395 IIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSL 454 + +I +P+GI + +P + PA V+ VV N+ + Sbjct: 185 LFCVVIGLPMGIVLAASERAQRWTRPLLDAMQTTPAFVYLVPVVMLFGIG----NVPGVI 240 Query: 455 LMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITAC 514 + I ++ G D E + ++ + + + LP P + G A Sbjct: 241 VTIVFALPPLVRLTNLGLRQVRPDLIEASRAYGASPLQLLWKVQLPLAMPSIMAGINQAL 300 Query: 515 GGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + + +++ + + G GLG + + +G L + + L+R Sbjct: 301 MLSLSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGLGIVLLAIVLDRL 351 >gi|167828808|ref|ZP_02460279.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167898868|ref|ZP_02486269.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|254186901|ref|ZP_04893417.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254264574|ref|ZP_04955439.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254301413|ref|ZP_04968857.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157811362|gb|EDO88532.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157934585|gb|EDO90255.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254215576|gb|EET04961.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 283 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 91 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 150 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 151 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 206 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 207 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 260 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 261 AIALALEIGLRALQRRLTPW 280 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 80 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 139 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 140 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 191 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 192 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 245 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 246 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 280 >gi|294817927|ref|ZP_06776569.1| ABC transporter related protein [Streptomyces clavuligerus ATCC 27064] gi|326446947|ref|ZP_08221681.1| taurine ABC transporter, permease protein [Streptomyces clavuligerus ATCC 27064] gi|294322742|gb|EFG04877.1| ABC transporter related protein [Streptomyces clavuligerus ATCC 27064] Length = 289 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 80/249 (32%), Gaps = 10/249 (4%) Query: 325 FHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC 384 P + VS + + + + + + + Sbjct: 35 RPVPGATAAARLSGAVSVLAGVGLWHLATVLGAVGVPGPAPVLARGAELLADGTLTTDAL 94 Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 ++ RV+ + + +PVG +G+ P + ++P+ Q P PL + + Sbjct: 95 ASVRRVLTGFALGTAAALPVGALMGWYPVARALLEPWVQFFRMVPPLAVIPLTIVLLGI- 153 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 ++ +V G + A + +++P P Sbjct: 154 ---DETPKITVIFLAAFLSTAVSVFQGVLTVDRTLIDAARVLGAREPVIFARVVVPATLP 210 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 + TGA G +W+ + +E+ + GLG + ++ + +G+L + Sbjct: 211 FLFTGARVGLGASWSTLVAAELIA------AQQGLGYRMQQAQLYYDLETIFVGILAIGS 264 Query: 565 FVLALNRFL 573 L ++R L Sbjct: 265 LGLLMDRLL 273 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 84/237 (35%), Gaps = 17/237 (7%) Query: 36 LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR 95 + G P ++ L +L A + R+L+ + L Sbjct: 64 VLGAVGVPGPAPVLARGAELLADGTLTTDALASVRRVLTGFALGTAAALPVGALMGWYPV 123 Query: 96 LGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMY 155 +L P + + +P L + T+V K I IF + + S++ Sbjct: 124 ARALLEPWVQFFRMVPPLAVIPLTIVLLGIDETPK--------ITVIFLAAFLSTAVSVF 175 Query: 156 QSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 Q + + R L + +R F + VP ++P L + + W +VA+E+I Sbjct: 176 QGVLTVDRTLIDAARVLGAREPVIFARVVVPATLPFLFTGARVGLGASWSTLVAAELIA- 234 Query: 216 GDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL---FRPMIVWSNK 269 G+G + A DL I +L + + L D+LL R W ++ Sbjct: 235 -----AQQGLGYRMQQAQLYYDLETIFVGILAIGSLGLLMDRLLIAAERRATAWQDR 286 >gi|221069604|ref|ZP_03545709.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] gi|220714627|gb|EED69995.1| binding-protein-dependent transport systems inner membrane component [Comamonas testosteroni KF-1] Length = 287 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 16/258 (6%) Query: 301 SSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIA 360 S SP+S V R+ P + + + + + + V G Sbjct: 6 PSIKSASPVSVQVASPSVRPARRRYMAPLEPVSPKAKWLLGTGFFLLFLLIWSAVTFGGL 65 Query: 361 WQSIGYIVNHFTYQDVLYVI------WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHI 414 ++ + + +T++RV+ I+ASI+ +P+GI +G + Sbjct: 66 VSPTFLASPLTMLREGILLFTEFDFHHDIGMTVWRVMGGFILASIVAVPLGIAMGAWKPV 125 Query: 415 SSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASA 474 + +PF PA+ F PL++ L++ G+ + I V Sbjct: 126 EAFFEPFVSFCRYLPASAFIPLLILWAGVGEAQK----LLVIFIGSVFQITLMVAVTVGG 181 Query: 475 FPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHL 534 D E A + + + +++PG P G AW IV+E+ Sbjct: 182 ARKDLVEAAYTLGASNTGIVKRVLIPGAAPGIAETLRLVLGWAWTYVIVAELIG------ 235 Query: 535 RTTGLGAYIAESTEKGSF 552 ++G+G I +S + Sbjct: 236 SSSGIGHMITDSQALLNT 253 Score = 88.4 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 18/250 (7%) Query: 22 LLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 L F+L+ + L P ++ + T R++ +++ Sbjct: 50 FLLFLLIWSAVTFGGLVSPTFLASPLTMLREGILLFTEFDFHHDIGMTVWRVMGGFILAS 109 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + P + + +P F+ +++ K++ Sbjct: 110 IVAVPLGIAMGAWKPVEAFFEPFVSFCRYLPASAFIPLLILWAGVGEAQKLL-------- 161 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF V+ +T + ++ +DL E + + S + +P + PG+ + + + Sbjct: 162 VIFIGSVFQITLMVAVTVGGARKDLVEAAYTLGASNTGIVKRVLIPGAAPGIAETLRLVL 221 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258 W +V+ +E+I GIG I + + I++ ++ + + + D + Sbjct: 222 GWAWTYVIVAELIGSSS------GIGHMITDSQALLNTGQIIFGIIIIGLIGLVSDFIFK 275 Query: 259 -LFRPMIVWS 267 L R M WS Sbjct: 276 TLNRRMFEWS 285 >gi|331661741|ref|ZP_08362664.1| taurine transport system permease protein TauC [Escherichia coli TA143] gi|331060163|gb|EGI32127.1| taurine transport system permease protein TauC [Escherichia coli TA143] Length = 275 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWCWPLSRQVTLGIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+V+ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ ++L Sbjct: 37 VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L PI+++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|296535218|ref|ZP_06897433.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296264457|gb|EFH10867.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 244 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 82/201 (40%), Gaps = 13/201 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +T++RV+ ++AS+I +P+G+ +G + + +PF PA+ F PL++ Sbjct: 52 GMTVWRVLGGFVLASVIAVPLGLAMGAYKGVEAFFEPFISFARYLPASAFIPLLILWAGV 111 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 ++ G+ + I+ V A A D E A + + +I+P Sbjct: 112 GEAQKLS----VIFLGSVFQIVIMVAVIAGATRIDLVEAAYTLGARQGGILKRVIIPAAA 167 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G AW IV+E+ +G+G I +S +++ G++++ Sbjct: 168 PQVMEALRLVLGWAWTYVIVAELIG------AQSGIGHMIMDSQRLLDTGQMIFGIVVIG 221 Query: 564 CFVLALNRFLW---HPLYLYG 581 L + L+ + Sbjct: 222 LIGLVTDFLFKALNRRLFRWA 242 Score = 85.4 bits (210), Expect = 3e-14, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 84/250 (33%), Gaps = 18/250 (7%) Query: 22 LLAFVLVIGIINILLHGI-QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISL 80 + F+ + G++ P + ++ T R+L V++ Sbjct: 7 FVLFIGLWGLVTATGFVQPLFLASPWQALASGWSLFTEYNFAGDVGMTVWRVLGGFVLAS 66 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + + + P + + +P F+ +++ K+ Sbjct: 67 VIAVPLGLAMGAYKGVEAFFEPFISFARYLPASAFIPLLILWAGVGEAQKLS-------- 118 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 IF V+ + + DL E + + + +P + P ++ + + + Sbjct: 119 VIFLGSVFQIVIMVAVIAGATRIDLVEAAYTLGARQGGILKRVIIPAAAPQVMEALRLVL 178 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL-- 258 W +V+ +E+I GIG I + + D +++ ++ + + + D L Sbjct: 179 GWAWTYVIVAELIG------AQSGIGHMIMDSQRLLDTGQMIFGIVVIGLIGLVTDFLFK 232 Query: 259 -LFRPMIVWS 267 L R + W+ Sbjct: 233 ALNRRLFRWA 242 >gi|315647564|ref|ZP_07900666.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] gi|315277003|gb|EFU40344.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus vortex V453] Length = 243 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 81/197 (41%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ I+ +RV++ + S+I IP G+ IG I +PF + P F L Sbjct: 36 GTLLQYIGISSYRVLLGWTLGSLIAIPAGLVIGKVGTIRVFAEPFLNFIRFIPPIAFITL 95 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + + +L+++ T + ++ N + G + D A S + W+ + Sbjct: 96 FLVWFGIGETSK----VMLIMYATFFIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLH 151 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +I+P PY TG A G ++ A I +E+ + G+G I S + Sbjct: 152 VIIPATVPYMFTGIRLAMGTSFMAIIGAEMIA------SNEGVGYLIWNSRLFFRTDWIF 205 Query: 557 LGVLIMCCFVLALNRFL 573 +G++ + +R + Sbjct: 206 VGLICLGFMGFLTDRAV 222 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 94/232 (40%), Gaps = 15/232 (6%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 + +++++ +G + P L +L QY ++ R+L + L Sbjct: 6 IWQLLSLV-YGPEILPGPIYTAKGGYELLMDGTLLQYIGISSYRVLLGWTLGSLIAIPAG 64 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 + K + + P L+ ++ IP + F+T +V+F KV+ I + Sbjct: 65 LVIGKVGTIRVFAEPFLNFIRFIPPIAFITLFLVWFGIGETSKVM--------LIMYATF 116 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 + + + + ++ D +RS S WQ ++ +P ++P + + ++M + + Sbjct: 117 FIVVLNTLTGVLSVEEDKIRSARSMGASEWQIVLHVIIPATVPYMFTGIRLAMGTSFMAI 176 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 + +EMI + G+G I + I ++ + + FL D+ + Sbjct: 177 IGAEMIASNE------GVGYLIWNSRLFFRTDWIFVGLICLGFMGFLTDRAV 222 >gi|283835587|ref|ZP_06355328.1| glycine betaine/L-proline transport system permease protein ProW [Citrobacter youngae ATCC 29220] gi|291068798|gb|EFE06907.1| glycine betaine/L-proline transport system permease protein ProW [Citrobacter youngae ATCC 29220] Length = 354 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + ++ I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIILFALIAWQISGVGMGVATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 99/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + P Sbjct: 63 PLDSWV------TEGIDWVVTHFRPVFQGIRVPVDYILNGFQQLLLGMPAPV-------- 108 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + IT+ V+ ++ + Sbjct: 109 ---AIILFALIAWQISGVGMGVATLISLIAIGAIGAWSQAM----ITLALVLTALLFCVV 161 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ P + ++P + PA V+ +V N+ ++ I Sbjct: 162 IGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G + P D E + SF + + + LP P + G A + Sbjct: 218 ALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|329926378|ref|ZP_08280854.1| putative aliphatic sulfonates transport permease protein SsuC [Paenibacillus sp. HGF5] gi|328939299|gb|EGG35659.1| putative aliphatic sulfonates transport permease protein SsuC [Paenibacillus sp. HGF5] Length = 285 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 17/260 (6%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------Y 373 +R + L + +V A + W + + Sbjct: 16 TRLRHKRIDRRFLFKLTHAWIGWLVPLFIIIVWQAAGAMGWLNPILLPTPLDIWKEFVHL 75 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 +I I+ +R ++ ++ + + GIW+GF + P Q+L P Sbjct: 76 TSSGELIRHLGISSWRALLGFLLGGSLGLAAGIWVGFSYKAERLVDPSLQMLRTLPHLAI 135 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL + + + LL+ G+ + + N G + N +VA + W Sbjct: 136 APLFILWFGFGETSK----ILLIAKGSFFPLYVNTFLGIRSVDNRLFDVARVLQFSRWDM 191 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 R +I+P P+ G + G AW +V+E+ ++G+G I ++ Sbjct: 192 IRRLIVPASLPHIFLGIRLSIGVAWLGLVVAELMG------SSSGIGYIINDARSFSWTT 245 Query: 554 EVVLGVLIMCCFVLALNRFL 573 V +G+L+ + + Sbjct: 246 VVFVGILVFALVGKLSDSLV 265 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 91/257 (35%), Gaps = 23/257 (8%) Query: 24 AFVLVIGIINILLHGIQETTVPRDIVDIVPI------TLDVHSLPQYASRTTLRMLSAMV 77 V + II G P + + I L ++ ++ R L + Sbjct: 38 WLVPLFIIIVWQAAGAMGWLNPILLPTPLDIWKEFVHLTSSGELIRHLGISSWRALLGFL 97 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 + S + ++ P L +++++P L +++F E + Sbjct: 98 LGGSLGLAAGIWVGFSYKAERLVDPSLQMLRTLPHLAIAPLFILWFG--------FGETS 149 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 I I + + + + + ++ L +V+R + S W L VP S+P + + Sbjct: 150 KILLIAKGSFFPLYVNTFLGIRSVDNRLFDVARVLQFSRWDMIRRLIVPASLPHIFLGIR 209 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 +S+ W +V +E++ GIG I A + +L V L D Sbjct: 210 LSIGVAWLGLVVAELMGSSS------GIGYIINDARSFSWTTVVFVGILVFALVGKLSDS 263 Query: 258 L---LFRPMIVWSNKFR 271 L L ++ W + ++ Sbjct: 264 LVKGLEGRLLRWQDSYK 280 >gi|261251605|ref|ZP_05944179.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio orientalis CIP 102891] gi|260938478|gb|EEX94466.1| L-proline Glycine Betaine ABC transport system permease protein proW [Vibrio orientalis CIP 102891] Length = 299 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 15/231 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 LV+ I L++ + + I + + + RT + ++S++ Sbjct: 65 LVLAICTGLVYAASRSWKLSLGCFVSLILIGYFGMWEDTMRTLSIITVCTLLSIVLGIPI 124 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 A+S R+ V+ P+LD+MQ++P +L V+ GK+ G I+AI Sbjct: 125 GIAMARSNRVQSVVTPMLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 178 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + +++ E S +F S Q+ + + +P +MP ++ + ++ Sbjct: 179 --PVIRLTNLGIRLVDKEVLEASTAFGASAKQRLFGVQLPLAMPTIMAGINQTIMMSLSM 236 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + AI Q L ++ + L+D+ Sbjct: 237 VVIASMIGV-------KGLGQPVLKAITNQYFTLGLLNGFAIVALAILFDR 280 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 77/232 (33%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + + C A +W+ + T+ + V +++ + Sbjct: 60 STPWMLVLAICTGLVYAASRSWKLSLGCFVSLILIGYFGMWEDTMRTLSIITVCTLLSIV 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GI + + S + P ++ PA V+ VV + + + ++ Sbjct: 120 LGIPIGIAMARSNRVQSVVTPMLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E +++F + + + LP P + G + + Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEASTAFGASAKQRLFGVQLPLAMPTIMAGINQTIMMSLS 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + ++ F +L + + +R Sbjct: 236 MVVIASMIG-------VKGLGQPVLKAITNQYFTLGLLNGFAIVALAILFDR 280 >gi|87120682|ref|ZP_01076575.1| putative permease [Marinomonas sp. MED121] gi|86163910|gb|EAQ65182.1| putative permease [Marinomonas sp. MED121] Length = 299 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 99/232 (42%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L IG+I +++G + V + + + + RT + ++S+ Sbjct: 65 LTIGVILAIVYGASRSWKLCTGVLASLLAIGILGMWDDTMRTLSIITVCTLLSIGIGIPT 124 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L ++S R ++ PILD+MQ++P +L V+ GK+ G + A+ Sbjct: 125 GILMSRSNRAQAIVTPILDVMQTMPAFVYLIPVVMLLG---IGKIPG-----VIAVIIYA 176 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 V + + + ++ E + +F + Q+ + + +P +MP ++ + ++ Sbjct: 177 VPPVIRLTNLGIRLVNKETLEAATAFGATAKQRLFGIQLPLAMPTIMAGINQTIMMALAM 236 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + +I Q L+ L ++ + ++D++ Sbjct: 237 VVVASMIGV-------KGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDRV 281 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 74/232 (31%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 S + +W+ ++ +L + T+ + V +++ Sbjct: 60 ASPWWLTIGVILAIVYGASRSWKLCTGVLASLLAIGILGMWDDTMRTLSIITVCTLLSIG 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I IP GI + + + P ++ PA V+ VV + + + +I Sbjct: 120 IGIPTGILMSRSNRAQAIVTPILDVMQTMPAFVYLIPVVMLLGIG----KIPGVIAVIIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E A++F T + I LP P + G A Sbjct: 176 AVPPVIRLTNLGIRLVNKETLEAATAFGATAKQRLFGIQLPLAMPTIMAGINQTIMMALA 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +V+ + GLG + +S F + L + + +R Sbjct: 236 MVVVASMIG-------VKGLGQPVLKSITNQYFTLGLFNGLAIVALAIIFDR 280 >gi|302556295|ref|ZP_07308637.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] gi|302473913|gb|EFL37006.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] Length = 288 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 76/192 (39%), Gaps = 10/192 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I++ R+ + + + G+ +G + S +P+ L P +F L++ + Sbjct: 95 GISLRRIAIGAGLGIAAGVIFGLLMGTVGWVRSLFEPWITFLRTLPPLAYFSLLIIWLGI 154 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ + + +A P E A + + W R +++P Sbjct: 155 ----NEEPKVTLLAVAAFPPVAVSTTTAVAAVPKSLIEAARALGASRWDVVRDVLVPSAL 210 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G A+++ + +E+ + G+G + ++ + P V++G++ + Sbjct: 211 PETLTGVRLAVGVAYSSLVAAELVNG------LPGIGGMVKDAANYNNTPVVLVGIIAIG 264 Query: 564 CFVLALNRFLWH 575 L ++ L Sbjct: 265 VSGLIIDGLLLR 276 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 82/201 (40%), Gaps = 14/201 (6%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L ++ + R+ + + ++ L + + P + ++++P L + + + Sbjct: 90 LVEHLGISLRRIAIGAGLGIAAGVIFGLLMGTVGWVRSLFEPWITFLRTLPPLAYFSLLI 149 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++ KV +AA + S ++ +P+ L E +R+ S W Sbjct: 150 IWLGINEEPKVTLLAVAAFP--------PVAVSTTTAVAAVPKSLIEAARALGASRWDVV 201 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + VP ++P + + +++ + +VA+E++ LPGIG + A + Sbjct: 202 RDVLVPSALPETLTGVRLAVGVAYSSLVAAELV------NGLPGIGGMVKDAANYNNTPV 255 Query: 241 ILYAMLTMLGVIFLYDQLLFR 261 +L ++ + + D LL R Sbjct: 256 VLVGIIAIGVSGLIIDGLLLR 276 >gi|239630003|ref|ZP_04673034.1| ABC-type proline/glycine betaine transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527615|gb|EEQ66616.1| ABC-type proline/glycine betaine transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 293 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 15/237 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + F++++ + L Q+ + + + + ++T +L+A +++++ Sbjct: 64 IWLFIILVLALTWYLKRDQKYRSLLIFELLGLLLIWNLGFWRDMTQTLTLVLTASLLAIV 123 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 AA+S+ + V+ P++D MQ++P +L V +F G V G + IFA Sbjct: 124 IGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFG---IGMVPGVVASVIFA 180 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 + + +P DL E + +F +GWQ+ + +PF+ ++ + SM Sbjct: 181 MP-----PTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGTIMAGINQSMM 235 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G+ + A+ D A L ++ + + D++ Sbjct: 236 LALSMVVIASMI-------GAMGLGTKVYFAVGRNDAGGGFVAGLAIVILAIILDRI 285 Score = 78.8 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 11/187 (5%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 T+ V+ ++A +I +P+GIW +S+ ++P + PA V+ V+ Sbjct: 110 TLTLVLTASLLAIVIGVPLGIWAAESKSVSAVVKPLMDFMQTMPAFVYLIPAVAFFGIGM 169 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + + G + P D E A +F TGW+ + LP Sbjct: 170 VPGVVASVIF----AMPPTVRMTQLGITQVPADLNEAAVAFGATGWQQLLKVQLPFARGT 225 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G + A + +++ + GLG + + + + L + Sbjct: 226 IMAGINQSMMLALSMVVIASMIG-------AMGLGTKVYFAVGRNDAGGGFVAGLAIVIL 278 Query: 566 VLALNRF 572 + L+R Sbjct: 279 AIILDRI 285 >gi|239834174|ref|ZP_04682502.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum intermedium LMG 3301] gi|239822237|gb|EEQ93806.1| binding-protein-dependent transport systems inner membrane component [Ochrobactrum intermedium LMG 3301] Length = 301 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISL 80 LLA V G+ + L + I + + L +H L + +L++ VI++ Sbjct: 44 LLAVPPVGGVAVLALLSLWRVGWKFAIFTALALGLIIHMDLWTGTMESLSLVLASTVIAV 103 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S + ++ P+LD+MQ++P +L ++F G V G IF Sbjct: 104 VIGIPLGIAMARSDTIASIVRPVLDLMQTMPAFVYLIPAAMFFGL---GAVPGTIATVIF 160 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A+ + + + + E +F + Q + + +P +MP ++ + ++ Sbjct: 161 AMP-----PVVRLTNLGIRQVHSEFVEAGLAFGCTSRQLLFKVQLPNAMPSIMAGINQTI 215 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G G+G+ + I+ ++ L ++ + + D++ Sbjct: 216 MLSLSMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266 Score = 73.8 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 86/234 (36%), Gaps = 15/234 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIG--YIVNHFTYQDVLYV-IWLGCI-TMFRVVVLIIIAS 398 +L + V +A+ W+ I ++++ +W G + ++ V+ +IA Sbjct: 44 LLAVPPVGGVAVLALLSLWRVGWKFAIFTALALGLIIHMDLWTGTMESLSLVLASTVIAV 103 Query: 399 IIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIF 458 +I IP+GI + I+S ++P L+ PA V+ + + + Sbjct: 104 VIGIPLGIAMARSDTIASIVRPVLDLMQTMPAFVYLIPAAMFFGLGAVPGTIATVIF--- 160 Query: 459 GTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 ++ G ++F E +F T + + LP P + G + Sbjct: 161 -AMPPVVRLTNLGIRQVHSEFVEAGLAFGCTSRQLLFKVQLPNAMPSIMAGINQTIMLSL 219 Query: 519 NASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + G GLG + ++ + G L + + L+R Sbjct: 220 SMVVIASMIGAG-------GLGNTVLTGIQRLNVGLGFEGGLAVVILAVILDRI 266 >gi|227113085|ref|ZP_03826741.1| putative aliphatic sulfonates transport permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 264 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 104/264 (39%), Gaps = 17/264 (6%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTL 70 +++R P + + V + + P ++ + L Q+ + + Sbjct: 8 LAQRFAPFLLPVTLLVAWQVSVEFGWLSNRILPAPSSVITAGWSLISSGELWQHLAISGW 67 Query: 71 RMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGK 130 R L I V + SR +L + +++++P L + +++F Sbjct: 68 RALIGFAIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGID---- 123 Query: 131 VIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMP 190 E A IF + ++ + + Y + NI R L E++RS+ LSG F + +P ++P Sbjct: 124 ----EAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFSQVVLPGALP 179 Query: 191 GLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLG 250 ++ + ++ W ++ +E I GIG A + ++ A++ Sbjct: 180 SIMVGIRFALGFMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYAL 233 Query: 251 VIFLYD---QLLFRPMIVWSNKFR 271 + L D Q L R + W+ ++ Sbjct: 234 LGKLADVSAQGLERIWLRWNPAYQ 257 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R ++ I I + +G G + Q++ P PLV+ Sbjct: 63 AISGWRALIGFAIGGSIGLVLGFITGLSRWGERLLDSSVQMIRNVPHLALIPLVILWFGI 122 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ GT + + N G E+A S+ ++G + ++LPG Sbjct: 123 ----DEAAKIFLVALGTLFPVYLNTYHGIKNIDRGLLEMARSYGLSGLSLFSQVVLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S +G+G + E VV+ +++ Sbjct: 179 PSIMVGIRFALGFMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYA 232 Query: 564 CFVLALN 570 + Sbjct: 233 LLGKLAD 239 >gi|326794337|ref|YP_004312157.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gi|326545101|gb|ADZ90321.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 299 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 97/232 (41%), Gaps = 15/232 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 L++GII L+ + + V + + + + RT + +S+ Sbjct: 65 LILGIIAGLVFFLSRSWKLSLGVTASLLAIGYFGMWEDTMRTLSIITVCTFLSIAIGVPI 124 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 L A+S R ++ P+LDIMQ++P +L V+ GK+ G I+AI Sbjct: 125 GILMARSNRAQSIITPLLDIMQTMPAFVYLIPVVMLLG---IGKIPGLIAVIIYAIP--- 178 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + +P + E + ++ + Q+ + + +P +MP ++ + ++ Sbjct: 179 --PVIRLTNLGIRLVPHETLEAATAYGATPTQRLFGVQLPLAMPTIMAGINQTIMMALAM 236 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI V G+G + +I Q L L ++ + ++D++ Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAIMFDRV 281 Score = 77.3 bits (189), Expect = 8e-12, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 75/231 (32%), Gaps = 11/231 (4%) Query: 341 SYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASII 400 + I + +W+ + + T+ + V ++ I Sbjct: 61 TPWWLILGIIAGLVFFLSRSWKLSLGVTASLLAIGYFGMWEDTMRTLSIITVCTFLSIAI 120 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 +P+GI + S I P ++ PA V+ VV + + + +I Sbjct: 121 GVPIGILMARSNRAQSIITPLLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVIIYA 176 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 ++ G P++ E A+++ T + + LP P + G A Sbjct: 177 IPPVIRLTNLGIRLVPHETLEAATAYGATPTQRLFGVQLPLAMPTIMAGINQTIMMALAM 236 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + +S F +L L + + +R Sbjct: 237 VVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAIMFDR 280 >gi|269967305|ref|ZP_06181368.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269828083|gb|EEZ82354.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 299 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 95/232 (40%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 +++G+ L++ + I + + + RT + ++++ Sbjct: 64 FIILGVCTTLVYAASRSWKLAAACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIALGIP 123 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S + V+ P+LD+MQ++P +L V+ GK+ G I+AI Sbjct: 124 IGIAMARSNHIQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ + + +P +MP ++ + ++ Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + +I Q L L ++ + L+D+ Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 Score = 79.6 bits (195), Expect = 2e-12, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + I C A +W+ + T+ + V ++A Sbjct: 60 STPWFIILGVCTTLVYAASRSWKLAAACFGSLILIGYFGMWEDTMRTLSIITVCTMLAIA 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GI + HI S + P ++ PA V+ VV + + + ++ Sbjct: 120 LGIPIGIAMARSNHIQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E A++F + + + LP P + G A + Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASTRQRLFGVQLPLAMPTIMAGINQTIMMALS 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + +S F +L L + + +R Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|167820438|ref|ZP_02452118.1| permease component of taurine ABC transporter [Burkholderia pseudomallei 91] Length = 255 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 63 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 122 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 123 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 179 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 232 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 233 AIALALEIGLRALQRRLTPW 252 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 52 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 111 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 112 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 163 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 164 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 217 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 218 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 252 >gi|166032562|ref|ZP_02235391.1| hypothetical protein DORFOR_02277 [Dorea formicigenerans ATCC 27755] gi|166026919|gb|EDR45676.1| hypothetical protein DORFOR_02277 [Dorea formicigenerans ATCC 27755] Length = 220 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 5/213 (2%) Query: 311 NNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH 370 N ++ R+ + + ++ W VA + +V Sbjct: 12 NRMQAATNNADRNRWRKLGGKNRNFAALIALIIICGIWTVAAHVVAKPFIFPYFEDVVKE 71 Query: 371 FTYQ-DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFP 429 Y +YV+ ITM RV+ + A II +P+G+ +G+ P I + PF L P Sbjct: 72 VIYSLSDMYVLRNLGITMRRVMTGALYAFIIGLPLGMIMGYSPKILRALSPFMNSLRQVP 131 Query: 430 ANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHIT 489 + PL + L+ F + I+ N I+G DF A S Sbjct: 132 IMAWVPLAIVWFGIGDG----PTIFLIAFSGVFTIILNTISGVQDISKDFYNAARSMGAN 187 Query: 490 GWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + I+LPG P +TG A G W + I Sbjct: 188 TLNIIKDIVLPGSLPGVMTGVRLAIGLGWMSVI 220 Score = 101 bits (253), Expect = 3e-19, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 85/194 (43%), Gaps = 11/194 (5%) Query: 18 NIFDLLAFVLVIGIINILLHGIQETTV-PR--DIVDIVPITLDVHSLPQYASRTTLRMLS 74 N L+A +++ GI + H + + + P D+V V +L + + T R+++ Sbjct: 35 NFAALIALIIICGIWTVAAHVVAKPFIFPYFEDVVKEVIYSLSDMYVLRNLGITMRRVMT 94 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 + + + + S ++ L P ++ ++ +PI+ ++ +V+F Sbjct: 95 GALYAFIIGLPLGMIMGYSPKILRALSPFMNSLRQVPIMAWVPLAIVWFGIGDGP----- 149 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 IF I S V+ + + + +I +D +RS + + +P S+PG++ Sbjct: 150 ---TIFLIAFSGVFTIILNTISGVQDISKDFYNAARSMGANTLNIIKDIVLPGSLPGVMT 206 Query: 195 NMMMSMSGGWFFVV 208 + +++ GW V+ Sbjct: 207 GVRLAIGLGWMSVI 220 >gi|153832168|ref|ZP_01984835.1| inner membrane protein [Vibrio harveyi HY01] gi|156977775|ref|YP_001448681.1| glycine betaine/L-proline ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116] gi|148871479|gb|EDL70334.1| inner membrane protein [Vibrio harveyi HY01] gi|156529369|gb|ABU74454.1| hypothetical protein VIBHAR_06563 [Vibrio harveyi ATCC BAA-1116] Length = 299 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 96/231 (41%), Gaps = 15/231 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 +++G+ L++ + + I + + + RT + ++++ Sbjct: 65 IILGVCTALVYAASRSWKLAVACFVSLILIGYFGMWEDTMRTLSIITVCTMLAIALGIPI 124 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 A+S R+ V+ P+LD+MQ++P +L V+ GK+ G I+AI Sbjct: 125 GIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 178 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + +++ E + +F S Q+ + +P +MP ++ + ++ Sbjct: 179 --PVIRLTNLGIRLVDKEVLEAATAFGASNKQRLVGVQLPLAMPTIMAGINQTIMMALSM 236 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + +I Q L L ++ + L+D+ Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 Score = 78.0 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + I C A +W+ + T+ + V ++A Sbjct: 60 STPWMIILGVCTALVYAASRSWKLAVACFVSLILIGYFGMWEDTMRTLSIITVCTMLAIA 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GI + + S + P ++ PA V+ VV + + + ++ Sbjct: 120 LGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E A++F + + + LP P + G A + Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASNKQRLVGVQLPLAMPTIMAGINQTIMMALS 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + +S F +L L + + +R Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|53722593|ref|YP_111578.1| permease component of taurine ABC transporter [Burkholderia pseudomallei K96243] gi|226195983|ref|ZP_03791569.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|52213007|emb|CAH39045.1| permease component of taurine ABC transporter [Burkholderia pseudomallei K96243] gi|225931876|gb|EEH27877.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] Length = 285 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 93 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 152 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 153 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 208 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 209 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 262 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 263 AIALALEIGLRALQRRLTPW 282 Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 82 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 141 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 142 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 193 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 194 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 247 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 248 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 282 >gi|317062411|ref|ZP_07926896.1| binding-protein-dependent transport system inner membrane component [Fusobacterium ulcerans ATCC 49185] gi|313688087|gb|EFS24922.1| binding-protein-dependent transport system inner membrane component [Fusobacterium ulcerans ATCC 49185] Length = 256 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 95/258 (36%), Gaps = 16/258 (6%) Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSI------GYIVNHFTYQDVLYVIWLGCIT 386 +L + L V + W S + + + +I I+ Sbjct: 3 RLKREKLKGMYLIAVILIVWTVGSHYNLWNSYIIPAPSKIVTSFVKLVENGKLIRHIGIS 62 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + R+ + I + +P+GI+ G +I + + + P P+++ Sbjct: 63 LRRIFIGFSITVFLAVPLGIFFGAFTNIYAYFKSIFEFFRHTPPLALIPMIILWFGIGET 122 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + ++++ + + + NV+ G + EV F ++ + IILP P Sbjct: 123 SK----IVIIVLASFFPVFLNVLKGVEGCDKKYIEVGKVFDMSQKDIFLKIILPNSVPDI 178 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 + G G +W A I +E+ + ++G+G I ++ + V+LG++++ Sbjct: 179 LIGLKLGIGYSWRAIIGAELIA------ASSGIGYLILDAQQISRSDIVMLGIIVIGTLG 232 Query: 567 LALNRFLWHPLYLYGTRC 584 + + + Y R Sbjct: 233 IITDNIFSKAVSAYIKRK 250 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 96/269 (35%), Gaps = 15/269 (5%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASR 67 + R ++ + ++V + + L P IV ++ L ++ Sbjct: 2 DRLKREKLKGMYLIAVILIVWTVGSHYNLWNSYIIPAPSKIVTSFVKLVENGKLIRHIGI 61 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R+ I++ + I + + P L + +++F Sbjct: 62 SLRRIFIGFSITVFLAVPLGIFFGAFTNIYAYFKSIFEFFRHTPPLALIPMIILWFGIGE 121 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K++ LA+ F +F ++ + + + EV + F +S F + +P Sbjct: 122 TSKIVIIVLASFFPVF--------LNVLKGVEGCDKKYIEVGKVFDMSQKDIFLKIILPN 173 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 S+P ++ + + + W ++ +E+I GIG I A + ++ ++ Sbjct: 174 SVPDILIGLKLGIGYSWRAIIGAELIAASS------GIGYLILDAQQISRSDIVMLGIIV 227 Query: 248 MLGVIFLYDQLLFRPMIVWSNKFRLERTT 276 + + + D + + + + + + + Sbjct: 228 IGTLGIITDNIFSKAVSAYIKRKQGDYVE 256 >gi|150396346|ref|YP_001326813.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150027861|gb|ABR59978.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 267 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 84/261 (32%), Gaps = 13/261 (4%) Query: 326 HFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI 385 L + +++ L I ++ + + + + Sbjct: 15 RLSSANLAPIALNLIAFTLAIGFWWGITAAKLVVLPGPAEVFQRAIELIASGQLPLDIAS 74 Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RV+ ++ IPVG +G+ + + I+P+ Q P PL + + Sbjct: 75 SLRRVLTGFLLGVAAAIPVGFLMGWYGPVRALIEPYIQFFRMVPPLAIIPLAIVTMGI-- 132 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 ++ + + G + A + +I+P P+ Sbjct: 133 --DEAPKVFVIFLASFLSCVVATYQGVISVDRTLISAARVLGANDGVLFHRVIIPASIPF 190 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 + G G AW + +E+ + +GLG + ++ P + + ++ + Sbjct: 191 ILVGVRIGLGSAWATVVAAELIA------AQSGLGFRMQQAQLYYDLPTIFVSLVTIGIL 244 Query: 566 VLALNRFLW---HPLYLYGTR 583 L ++R + L + R Sbjct: 245 GLLMDRIVQATERRLTRWQER 265 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 103/266 (38%), Gaps = 18/266 (6%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHG-IQETTVPRDIVDIVPITLDVHSLPQYASRT 68 S + P +L+AF L IG + + P ++ + LP + + Sbjct: 16 LSSANLAPIALNLIAFTLAIGFWWGITAAKLVVLPGPAEVFQRAIELIASGQLPLDIASS 75 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R+L+ ++ + L + ++ P + + +P L + +V Sbjct: 76 LRRVLTGFLLGVAAAIPVGFLMGWYGPVRALIEPYIQFFRMVPPLAIIPLAIVTMGID-- 133 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 E +F IF + + + YQ + ++ R L +R + F + +P S Sbjct: 134 ------EAPKVFVIFLASFLSCVVATYQGVISVDRTLISAARVLGANDGVLFHRVIIPAS 187 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 +P ++ + + + W VVA+E+I G+G + A DL I +++T+ Sbjct: 188 IPFILVGVRIGLGSAWATVVAAELIA------AQSGLGFRMQQAQLYYDLPTIFVSLVTI 241 Query: 249 LGVIFLYDQLL---FRPMIVWSNKFR 271 + L D+++ R + W + R Sbjct: 242 GILGLLMDRIVQATERRLTRWQERAR 267 >gi|21243923|ref|NP_643505.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] gi|21109531|gb|AAM38041.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] Length = 264 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 I+ +R V + I I +G+ G + Q+L P PLV+ Sbjct: 63 AISSWRAAVGLAIGGSIGFALGLLTGVCRVAERLLDSALQMLRNVPHLALIPLVILWFGI 122 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ GT + I N G + E+A ++ + G + +R ++LPG Sbjct: 123 ----DEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMARNYGLRGPQLFRDVLLPGAL 178 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G A G W IV+E S ++G+G + E VV+ +++ Sbjct: 179 PSILVGLRFALGLMWLTLIVAETIS------ASSGIGYLATNAREFLQTDIVVVAIVLYA 232 Query: 564 CFVLALN 570 + Sbjct: 233 LLGKLAD 239 Score = 116 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 15/225 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P ++ + L Q+ + ++ R + I F L R +L Sbjct: 39 LPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIGFALGLLTGVCRVAERLLD 98 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 L +++++P L + +++F E A +F + + + + Y + ++ Sbjct: 99 SALQMLRNVPHLALIPLVILWFGID--------EGAKLFLVALGTFFPIYLNTYHGIRSV 150 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 L E++R++ L G Q F + +P ++P ++ + ++ W ++ +E I Sbjct: 151 DPALIEMARNYGLRGPQLFRDVLLPGALPSILVGLRFALGLMWLTLIVAETISASS---- 206 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 GIG A + ++ A++ + L D L R + W Sbjct: 207 --GIGYLATNAREFLQTDIVVVAIVLYALLGKLAD-LAARGLEAW 248 >gi|15598639|ref|NP_252133.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107102977|ref|ZP_01366895.1| hypothetical protein PaerPA_01004046 [Pseudomonas aeruginosa PACS2] gi|218890357|ref|YP_002439221.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254236397|ref|ZP_04929720.1| hypothetical protein PACG_02377 [Pseudomonas aeruginosa C3719] gi|254242129|ref|ZP_04935451.1| hypothetical protein PA2G_02858 [Pseudomonas aeruginosa 2192] gi|9949584|gb|AAG06831.1|AE004765_4 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126168328|gb|EAZ53839.1| hypothetical protein PACG_02377 [Pseudomonas aeruginosa C3719] gi|126195507|gb|EAZ59570.1| hypothetical protein PA2G_02858 [Pseudomonas aeruginosa 2192] gi|218770580|emb|CAW26345.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 262 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 104/267 (38%), Gaps = 17/267 (6%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 ++ R+ P L+ + + + P +++ L + Q+ + + Sbjct: 6 RLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISG 65 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R +I V + S+ L + +++++P L + +++F Sbjct: 66 WRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--- 122 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E A IF + ++ + + Y + I L E++RS+ LSG+ F + +P ++ Sbjct: 123 -----ESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ + ++ W ++ +E I GIG A + ++ A+L Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYA 231 Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLE 273 + L D + L R + W ++++ Sbjct: 232 VLGKLADLAARGLERVWLRWHPAYQVK 258 Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 83/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390 +R++ V A+ W S + + + + I+ +R Sbjct: 9 ERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRA 68 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +I I + +G G + Q++ P PLV+ Sbjct: 69 AIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DES 124 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G Sbjct: 125 AKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGV 184 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S ++G+G + E VVL +L+ + Sbjct: 185 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 238 >gi|320332813|ref|YP_004169524.1| ABC transporter integral membrane subunit [Deinococcus maricopensis DSM 21211] gi|319754102|gb|ADV65859.1| ABC-type transporter, integral membrane subunit [Deinococcus maricopensis DSM 21211] Length = 296 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 96/251 (38%), Gaps = 18/251 (7%) Query: 23 LAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 +A ++ H + P +V + L + + R ++I Sbjct: 59 VALLVAWQWAASTGHLNARVLPAPSAVVTALIDLARSGELWTHFLASLQRAGVGVLIGGT 118 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 F+ L SR ++L ++++IP L + +V+F GK +F Sbjct: 119 LGFLLGILTGASRAAHLLLDSTFQMLRTIPNLALIPLVIVWFGIGETGK--------VFL 170 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I + + + + + I L+E++R + LS + F + +P ++PG++ + ++ Sbjct: 171 IALATYFPVYLNTVHGVHGIDGRLKEMARVYGLSPAETFRRVTLPGALPGVLVGVRYALG 230 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 W +V SE GIG A + I+ A++ + D ++ Sbjct: 231 ISWLALVVSESFGAS------RGIGFLAMDAREFFRTDVIVLAIVIYALIGKAADGLVRV 284 Query: 259 LFRPMIVWSNK 269 L + ++ W + Sbjct: 285 LEQRLLPWRGR 295 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 10/234 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 V+ ++ W + + + + ++ R V ++I Sbjct: 59 VALLVAWQWAASTGHLNARVLPAPSAVVTALIDLARSGELWTHFLASLQRAGVGVLIGGT 118 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + +GI G + Q+L P PLV+ L+ Sbjct: 119 LGFLLGILTGASRAAHLLLDSTFQMLRTIPNLALIPLVIVWFGIGETGK----VFLIALA 174 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 T + + N + G KE+A + ++ +R + LPG P + G A G +W Sbjct: 175 TYFPVYLNTVHGVHGIDGRLKEMARVYGLSPAETFRRVTLPGALPGVLVGVRYALGISWL 234 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 A +VSE + G+G ++ E +VL ++I A + + Sbjct: 235 ALVVSESFG------ASRGIGFLAMDAREFFRTDVIVLAIVIYALIGKAADGLV 282 >gi|303328242|ref|ZP_07358680.1| taurine ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] gi|302861572|gb|EFL84508.1| taurine ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] Length = 260 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 74/192 (38%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + + +++ RV++ + A ++ IP+G+ +G + + + P ++ L+V Sbjct: 63 LFYHCMVSLGRVLLGWLAACVVAIPLGLAMGLSSKVRAVFDYLIEFYRPLPPLAYYTLLV 122 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + LL+ + + G + A S + + II Sbjct: 123 LWFGIGEFSK----ILLLFLAAIPPLTIGAVEGVKEVSPSVIQAARSLGADSRQVFCRII 178 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 LP P +T + G + + +E+ + T G+G + ++++ + +G Sbjct: 179 LPATTPAIITSMRISLGFTYTVLVAAEIVA------ATEGIGWMVWDASKFMRSDIIFVG 232 Query: 559 VLIMCCFVLALN 570 ++ M + L+ Sbjct: 233 IITMGVTGIGLD 244 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 17/211 (8%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R+L + + + S ++ V +++ + +P L + T Sbjct: 61 RGLFYHCMVSLGRVLLGWLAACVVAIPLGLAMGLSSKVRAVFDYLIEFYRPLPPLAYYTL 120 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 V++F E + I +F + + +T + + + + + +RS Q Sbjct: 121 LVLWFGIG--------EFSKILLLFLAAIPPLTIGAVEGVKEVSPSVIQAARSLGADSRQ 172 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P + P ++ +M +S+ + +VA+E++ GIG + A K Sbjct: 173 VFCRIILPATTPAIITSMRISLGFTYTVLVAAEIVA------ATEGIGWMVWDASKFMRS 226 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 I ++TM D + + ++ W Sbjct: 227 DIIFVGIITMGVTGIGLDACLRFAAKHLLRW 257 >gi|124485881|ref|YP_001030497.1| hypothetical protein Mlab_1061 [Methanocorpusculum labreanum Z] gi|124363422|gb|ABN07230.1| binding-protein-dependent transport systems inner membrane component [Methanocorpusculum labreanum Z] Length = 280 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 16/234 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVH-SLPQYASRTTLRMLSAMVISLLFTF 84 ++I + +++ + + I+ ++ + L L + T + +L A VI+L + Sbjct: 51 PVLIALTGVIVWFVTRHDIKMTILTMLGLVLIWDLGLWDLSMLTVVLVLIATVIALALSI 110 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 AA+S L L PILD MQ++P +L V++F G V G IFA+ Sbjct: 111 PIGIGAARSDTLNAALRPILDFMQTMPSFVYLIPAVIFFGL---GSVPGIIATVIFAMPP 167 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + +P +L EV+ +F + QK + + +P ++P ++ + + Sbjct: 168 A-----LRLTTLGIRQVPVELIEVADAFGATPRQKLFKVQLPVALPTIMAGVNQCIMLAL 222 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 V + MI G G+G + + I+ D+ A L ++ + ++D++ Sbjct: 223 SMTVIASMIGAG-------GLGYQVLVGIQRVDIGMGFEAGLAIVILAIIFDRI 269 Score = 76.1 bits (186), Expect = 2e-11, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 90/276 (32%), Gaps = 17/276 (6%) Query: 297 FIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVA 356 + + S + + L V+ + L + + ++ I WF + Sbjct: 11 AVEAIVDWIETYFSWLLDAISDGLRVLVNGLEDILLAVPAPVLIALTGVIVWFVTRHDIK 70 Query: 357 IGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISS 416 + I ++ D L +T+ V++ +IA + IP+GI +++ Sbjct: 71 MTILTMLGLVLIWDLGLWD------LSMLTVVLVLIATVIALALSIPIGIGAARSDTLNA 124 Query: 417 KIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFP 476 ++P + P+ V+ V + + + L G P Sbjct: 125 ALRPILDFMQTMPSFVYLIPAVIFFGLGSVPGIIATVIF----AMPPALRLTTLGIRQVP 180 Query: 477 NDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 + EVA +F T + + LP P + G A + ++++ + G Sbjct: 181 VELIEVADAFGATPRQKLFKVQLPVALPTIMAGVNQCIMLALSMTVIASMIGAG------ 234 Query: 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + ++ L + + +R Sbjct: 235 -GLGYQVLVGIQRVDIGMGFEAGLAIVILAIIFDRI 269 >gi|253583587|ref|ZP_04860785.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834159|gb|EES62722.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 256 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 90/244 (36%), Gaps = 16/244 (6%) Query: 333 QLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNH------FTYQDVLYVIWLGCIT 386 L + L + + + W S + +I I+ Sbjct: 3 SLKREKLKGIYLIVLILFIWTAGSHYGLWNSYIIPAPTKIIDSFVKLIENGKLIKHIAIS 62 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + R+ + I + +P+GI+ G ++ + + P P+++ Sbjct: 63 LRRIFIGFSITVFLAVPLGIFFGAFTNVYVYFKSIFEFFRHTPPLALIPMIILWFGIGET 122 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + +++I + + + NV+ G + EV F+++ + IILP P Sbjct: 123 SK----IVIIILASFFPVFLNVLKGVGGCDKKYIEVGKVFNLSQKDIFLKIILPNSVPDI 178 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 + G G +W A I +E+ + ++G+G I ++ + V+LG++++ Sbjct: 179 LIGLKLGIGYSWRAIIGAELIA------ASSGIGYLILDAQQISRSDIVMLGIIVIGTLG 232 Query: 567 LALN 570 + + Sbjct: 233 IITD 236 Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 96/260 (36%), Gaps = 15/260 (5%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 + R I+ ++ + + + L P I+D ++ L ++ + + Sbjct: 4 LKREKLKGIYLIVLILFIWTAGSHYGLWNSYIIPAPTKIIDSFVKLIENGKLIKHIAISL 63 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R+ I++ + + I + + P L + +++F Sbjct: 64 RRIFIGFSITVFLAVPLGIFFGAFTNVYVYFKSIFEFFRHTPPLALIPMIILWFGIGETS 123 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 K++ LA+ F +F ++ + + + EV + F LS F + +P S+ Sbjct: 124 KIVIIILASFFPVF--------LNVLKGVGGCDKKYIEVGKVFNLSQKDIFLKIILPNSV 175 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ + + + W ++ +E+I GIG I A + ++ ++ + Sbjct: 176 PDILIGLKLGIGYSWRAIIGAELIAASS------GIGYLILDAQQISRSDIVMLGIIVIG 229 Query: 250 GVIFLYDQLLFRPMIVWSNK 269 + + D + + + + + Sbjct: 230 TLGIITDNVFSKIVSTYIKR 249 >gi|20090989|ref|NP_617064.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina acetivorans C2A] gi|19916076|gb|AAM05544.1| glycine betaine/L-proline ABC transporter, permease [Methanosarcina acetivorans C2A] Length = 276 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 16/233 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTFV 85 L I +I +L + + + I L D L + T +LS+ +++L+ Sbjct: 52 LFILVIALLAYFAGKRNLKLAIGTAFGFFLIDNMGLWTLSMETLALVLSSALLALIIGIP 111 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 L+AK+ L L P LD MQ++P +L +++F G V G +FA+ + Sbjct: 112 TGILSAKNEVLYHFLKPTLDFMQTMPPFVYLIPALLFFGL---GNVPGMIATVVFAMPPA 168 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + +P++L EV+ +F +GWQK + +P ++P ++ + + Sbjct: 169 -----IRLTNLGIRQVPKELTEVADAFGSTGWQKLTKVELPVALPTIMAGINQCIMLSLS 223 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + I+ D+ A L ++ + + D++ Sbjct: 224 MVVIAAMI-------GARGLGYQVLFGIQRVDIGLGFEAGLAIVIIAVVLDRV 269 Score = 78.0 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 14/228 (6%) Query: 347 FWFCVVCGVAIGIAWQSIGYIVNH---FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIP 403 + V+ +A +++ + F D + + L T+ V+ ++A II IP Sbjct: 52 LFILVIALLAYFAGKRNLKLAIGTAFGFFLIDNMGLWTLSMETLALVLSSALLALIIGIP 111 Query: 404 VGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWY 463 GI + ++P + P V+ + ++ + + Sbjct: 112 TGILSAKNEVLYHFLKPTLDFMQTMPPFVYLIPALLFFGLGNVPGMIATVVF----AMPP 167 Query: 464 ILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIV 523 + G P + EVA +F TGW+ + LP P + G + + ++ Sbjct: 168 AIRLTNLGIRQVPKELTEVADAFGSTGWQKLTKVELPVALPTIMAGINQCIMLSLSMVVI 227 Query: 524 SEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 + + GLG + ++ L + + L+R Sbjct: 228 AAMIG-------ARGLGYQVLFGIQRVDIGLGFEAGLAIVIIAVVLDR 268 >gi|300869325|ref|ZP_07113916.1| Binding-protein-dependent transport systems inner membrane component [Oscillatoria sp. PCC 6506] gi|300332702|emb|CBN59114.1| Binding-protein-dependent transport systems inner membrane component [Oscillatoria sp. PCC 6506] Length = 283 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 10/197 (5%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ +++RV V AS+ IP+G+ +G P I + ++P L+ PA F PL Sbjct: 82 GDLLKDTVASLWRVGVGFFFASLFSIPIGVMMGSFPSIRALLEPIFGLMRYMPAPAFIPL 141 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 ++ + L+ G ++ V+ D E W + Sbjct: 142 LILYLGIG----EEPKITLIFIGVFFFNSLMVMDTVKFVSKDLIEATYMLGGNRWETLTH 197 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 +I+P + P + + AW IVSE+ + T GLG I+ + E+ Sbjct: 198 VIVPHVLPGIIDASRINFAAAWQLVIVSELIA------ATEGLGRRISVAGRFLKTDEIF 251 Query: 557 LGVLIMCCFVLALNRFL 573 +G++++ L + Sbjct: 252 VGLIVIGVIGLTFDLLF 268 Score = 113 bits (284), Expect = 7e-23, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 97/246 (39%), Gaps = 15/246 (6%) Query: 25 FVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTF 84 +L + + + P ++++ L + + R+ + LF+ Sbjct: 48 LLLWWLVTTFIKVDPKFLPSPGNVLEAFGRLWSSGDLLKDTVASLWRVGVGFFFASLFSI 107 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 + + +L PI +M+ +P F+ ++Y E I IF Sbjct: 108 PIGVMMGSFPSIRALLEPIFGLMRYMPAPAFIPLLILYLGIG--------EEPKITLIFI 159 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + + + ++ + +DL E + + W+ ++ VP +PG++ ++ + W Sbjct: 160 GVFFFNSLMVMDTVKFVSKDLIEATYMLGGNRWETLTHVIVPHVLPGIIDASRINFAAAW 219 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMI 264 V+ SE+I + G+G I++A + I ++ + + +D LLF+ M+ Sbjct: 220 QLVIVSELIAATE------GLGRRISVAGRFLKTDEIFVGLIVIGVIGLTFD-LLFQYML 272 Query: 265 VWSNKF 270 S K+ Sbjct: 273 QVSCKW 278 >gi|156932792|ref|YP_001436708.1| glycine betaine transporter membrane protein [Cronobacter sakazakii ATCC BAA-894] gi|156531046|gb|ABU75872.1| hypothetical protein ESA_00588 [Cronobacter sakazakii ATCC BAA-894] Length = 356 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V + L A T +L+A++ + Sbjct: 103 LLGMPAPVAIILFALIAWQISGVGMGVATLVSLILIGAIGAWSQAMVTLALVLTALLFCV 162 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 163 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 219 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E +RSF S Q + + +P +MP ++ + ++ Sbjct: 220 A-----LPPVVRLTILGINQVPEDLIEAARSFGSSPRQMLFKVQLPLAMPTIMAGINQTL 274 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 275 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 325 Score = 85.4 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 94/280 (33%), Gaps = 19/280 (6%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 R++ + + + + I F + L + + + I W Sbjct: 65 PLDRWVTEGIDWVVTHFRPLFQGIRVPVDYILNAFQQLLLGMPAPVAIILFALIAWQISG 124 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 G+ + I + +T+ V+ ++ +I +P+GIW+ P Sbjct: 125 VGMGVATLVSLI--------LIGAIGAWSQAMVTLALVLTALLFCVVIGLPLGIWLARSP 176 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + I+P + PA V+ +V N+ ++ I ++ I G Sbjct: 177 RAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIFALPPVVRLTILGI 232 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 + P D E A SF + + + LP P + G A + +++ + + G Sbjct: 233 NQVPEDLIEAARSFGSSPRQMLFKVQLPLAMPTIMAGINQTLMLALSMVVIASMIAVG-- 290 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G + + + L+R Sbjct: 291 -----GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 325 >gi|49083004|gb|AAT50902.1| PA3443 [synthetic construct] Length = 263 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 104/267 (38%), Gaps = 17/267 (6%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 ++ R+ P L+ + + + P +++ L + Q+ + + Sbjct: 6 RLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISG 65 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R +I V + S+ L + +++++P L + +++F Sbjct: 66 WRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--- 122 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E A IF + ++ + + Y + I L E++RS+ LSG+ F + +P ++ Sbjct: 123 -----ESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ + ++ W ++ +E I GIG A + ++ A+L Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYA 231 Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLE 273 + L D + L R + W ++++ Sbjct: 232 VLGKLADLAARGLGRVWLRWHPAYQVK 258 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 83/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390 +R++ V A+ W S + + + + I+ +R Sbjct: 9 ERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRA 68 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +I I + +G G + Q++ P PLV+ Sbjct: 69 AIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DES 124 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G Sbjct: 125 AKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGV 184 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S ++G+G + E VVL +L+ + Sbjct: 185 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 238 >gi|294085665|ref|YP_003552425.1| nitrate ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292665240|gb|ADE40341.1| nitrate ABC transporter, permease protein, putative [Candidatus Puniceispirillum marinum IMCC1322] Length = 277 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 14/203 (6%) Query: 385 ITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYY 444 + RV+ ++A I+ IP G+ + + P ++L P + P + + Sbjct: 80 ASFQRVLAGFLVAMIVGIPFGLMLAVNKYFREIFFPPFEILRPIPPLAWVPASLI----F 135 Query: 445 HLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFP 504 + ++ + G + I+ NV+ GA A + A S + W + IILPG P Sbjct: 136 WPTNEMSIAFVTFLGAFFTIVINVLGGARAIDVRYLRAAQSMGASQWHLFYRIILPGTLP 195 Query: 505 YYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCC 564 TGA G W + +E+ S G LG +I S GS +V+G++ + Sbjct: 196 SIFTGAAVGMGITWEVVLAAEMISGGGTQGGGG-LGFFIWSSYMGGSLEHIVVGMISIGI 254 Query: 565 FVLALNRFL---------WHPLY 578 + + W L+ Sbjct: 255 AGYLCSSSIRKLGIFFMPWRRLF 277 Score = 99 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 98/243 (40%), Gaps = 16/243 (6%) Query: 19 IFDLLAFVLVIGIINIL-------LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLR 71 I + F++V ++ + GI P D++ + Q + R Sbjct: 25 IMSIFVFLVVWQFGALIDDWTGYDMLGIGLVPPPVDVLITWADVVPNLGYWQSWVASFQR 84 Query: 72 MLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKV 131 +L+ +++++ + + A ++ + P +I++ IP L ++ +++++ Sbjct: 85 VLAGFLVAMIVGIPFGLMLAVNKYFREIFFPPFEILRPIPPLAWVPASLIFW-------- 136 Query: 132 IGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPG 191 E++ F F + + ++ I ++S S W F+ + +P ++P Sbjct: 137 PTNEMSIAFVTFLGAFFTIVINVLGGARAIDVRYLRAAQSMGASQWHLFYRIILPGTLPS 196 Query: 192 LVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGV 251 + + M W V+A+EMI G T +G +I + L I+ M+++ Sbjct: 197 IFTGAAVGMGITWEVVLAAEMISGGGTQGGGG-LGFFIWSSYMGGSLEHIVVGMISIGIA 255 Query: 252 IFL 254 +L Sbjct: 256 GYL 258 >gi|167907187|ref|ZP_02494392.1| permease component of taurine ABC transporter [Burkholderia pseudomallei NCTC 13177] Length = 256 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 64 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 123 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 124 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 179 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 180 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 233 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 234 AIALALEIGLRALQRRLTPW 253 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 53 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 112 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 113 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 164 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 165 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 218 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 219 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 253 >gi|84385528|ref|ZP_00988559.1| putative permease [Vibrio splendidus 12B01] gi|218709515|ref|YP_002417136.1| ABC transporter transmembrane protein [Vibrio splendidus LGP32] gi|84379508|gb|EAP96360.1| putative permease [Vibrio splendidus 12B01] gi|218322534|emb|CAV18693.1| ABC transporter: transmembrane protein (IM) [Vibrio splendidus LGP32] Length = 299 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 95/232 (40%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++V+ + L++ + + + + + + RT + ++S+ Sbjct: 64 IIVLAVCTSLVYAASRSWKLALGCVVSLLLIGYFGMWEDTMRTLSIITVCTLVSIFLGIP 123 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S R ++ P+LDIMQ++P +L V+ GK+ G I+AI Sbjct: 124 IGIAMARSNRAQSIVTPMLDIMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ W + +P +MP ++ + ++ Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + +I Q L ++ + L+D+ Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 76/232 (32%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + + C A +W+ V + T+ + V +++ Sbjct: 60 STPWIIVLAVCTSLVYAASRSWKLALGCVVSLLLIGYFGMWEDTMRTLSIITVCTLVSIF 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GI + S + P ++ PA V+ VV + + + ++ Sbjct: 120 LGIPIGIAMARSNRAQSIVTPMLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E A++F + + + LP P + G A + Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + +S F ++ + + +R Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280 >gi|282862841|ref|ZP_06271902.1| binding-protein-dependent transport systems inner membrane component [Streptomyces sp. ACTE] gi|282562527|gb|EFB68068.1| binding-protein-dependent transport systems inner membrane component [Streptomyces sp. ACTE] Length = 286 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 80/196 (40%), Gaps = 10/196 (5%) Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 Y++ I++ R+ + I + G+ +G + S +P+ L P +F L+ Sbjct: 87 YLLEHLGISLRRIALGAGIGIAAGVVFGLLMGTVRWVRSLFEPWITFLRTLPPLAYFSLL 146 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 + + L+ + + +A P+ E A + + W R + Sbjct: 147 IIWLGI----NEEPKITLLAVAAFPPVAVSTTTAVAAVPSSLVEAARALGASRWDVVRDV 202 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 ++P P +TG A G A+++ + +E+ + G+G + ++ + P V++ Sbjct: 203 LVPSALPETLTGVRLAVGVAYSSLVAAELVNG------LPGIGGMVRDAANYNNTPVVLV 256 Query: 558 GVLIMCCFVLALNRFL 573 G++ + L ++ L Sbjct: 257 GIIAIGVSGLVIDGLL 272 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 80/200 (40%), Gaps = 14/200 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L ++ + R+ I + V+ L R + + P + ++++P L + + + Sbjct: 88 LLEHLGISLRRIALGAGIGIAAGVVFGLLMGTVRWVRSLFEPWITFLRTLPPLAYFSLLI 147 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 ++ E I + + + S ++ +P L E +R+ S W Sbjct: 148 IWLGIN--------EEPKITLLAVAAFPPVAVSTTTAVAAVPSSLVEAARALGASRWDVV 199 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + VP ++P + + +++ + +VA+E++ LPGIG + A + Sbjct: 200 RDVLVPSALPETLTGVRLAVGVAYSSLVAAELV------NGLPGIGGMVRDAANYNNTPV 253 Query: 241 ILYAMLTMLGVIFLYDQLLF 260 +L ++ + + D LL Sbjct: 254 VLVGIIAIGVSGLVIDGLLL 273 >gi|86146033|ref|ZP_01064360.1| putative permease [Vibrio sp. MED222] gi|85836238|gb|EAQ54369.1| putative permease [Vibrio sp. MED222] Length = 299 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 94/232 (40%), Gaps = 15/232 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFV 85 ++V+ + L++ + + + + + RT + ++S+ Sbjct: 64 IIVLAVCTSLVYAASRSWKLALGCVASLLLIGYFGMWEDTMRTLSIITVCTLVSIFLGIP 123 Query: 86 YATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTS 145 A+S R ++ P+LDIMQ++P +L V+ GK+ G I+AI Sbjct: 124 IGIAMARSNRAQSIVTPMLDIMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP-- 178 Query: 146 QVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWF 205 + + + +++ E + +F S Q+ W + +P +MP ++ + ++ Sbjct: 179 ---PVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235 Query: 206 FVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + +I Q L ++ + L+D+ Sbjct: 236 MVVIASMIGV-------KGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 76/232 (32%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + + C A +W+ V + T+ + V +++ Sbjct: 60 STPWIIVLAVCTSLVYAASRSWKLALGCVASLLLIGYFGMWEDTMRTLSIITVCTLVSIF 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GI + S + P ++ PA V+ VV + + + ++ Sbjct: 120 LGIPIGIAMARSNRAQSIVTPMLDIMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E A++F + + + LP P + G A + Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASKKQRLWGVQLPLAMPTIMAGINQTIMMALS 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + +S F ++ + + +R Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLMNGFAIVALAILFDR 280 >gi|78223107|ref|YP_384854.1| binding-protein dependent transport system inner membrane protein [Geobacter metallireducens GS-15] gi|78194362|gb|ABB32129.1| Binding-protein-dependent transport systems inner membrane component [Geobacter metallireducens GS-15] Length = 252 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 10/190 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 +++ R ++A + +P+G+ +G +P + P QLL +FPL V Sbjct: 58 GVSLARFGSAYLLALVTAVPLGLLLGRQPLARCAVDPLIQLLRPISPIAWFPLAVLWFGI 117 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 N ++ + IL + I+ P + +VA++F + +++P F Sbjct: 118 G----NAPAVFIIFLSVFFPILVSTISAVVKVPVIYLKVAANFGTRPLPTFLRVVVPAAF 173 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P + G G W + E+ +GLG I ++ ++ G+L++ Sbjct: 174 PGIMVGLHIGVGTGWIHLVAGEMLG------AQSGLGFMIIDARNFLRTDWILAGMLVVG 227 Query: 564 CFVLALNRFL 573 L +NR + Sbjct: 228 LLGLLINRVM 237 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 101/251 (40%), Gaps = 16/251 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRT 68 P ++R+ P + AF+ + ++ ++ P D+V + L + + Sbjct: 3 PKSAQRVLP-LVSAAAFIAMWQVVARFYP-PEQFPAPTDVVKALVELSADGVLWGHIGVS 60 Query: 69 TLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYP 128 R SA +++L+ L + + P++ +++ I + + V++F Sbjct: 61 LARFGSAYLLALVTAVPLGLLLGRQPLARCAVDPLIQLLRPISPIAWFPLAVLWFGIG-- 118 Query: 129 GKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFS 188 A+F IF S + + S ++ +P +V+ +F F + VP + Sbjct: 119 ------NAPAVFIIFLSVFFPILVSTISAVVKVPVIYLKVAANFGTRPLPTFLRVVVPAA 172 Query: 189 MPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM 248 PG++ + + + GW +VA EM+ G+G I A IL ML + Sbjct: 173 FPGIMVGLHIGVGTGWIHLVAGEMLG------AQSGLGFMIIDARNFLRTDWILAGMLVV 226 Query: 249 LGVIFLYDQLL 259 + L ++++ Sbjct: 227 GLLGLLINRVM 237 >gi|301159375|emb|CBW18893.1| glycine betaine/L-proline transport system permease protein P [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323131166|gb|ADX18596.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 354 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V I ++ I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.1 bits (212), Expect = 2e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIA 397 +L V + IAWQ G + T ++ + +G IT+ V+ ++ Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFC 159 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + ++P + PA V+ +V N+ ++ I Sbjct: 160 VVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 215 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 216 IFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 275 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 276 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|302553443|ref|ZP_07305785.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] gi|302471061|gb|EFL34154.1| nitrate ABC transporter, permease [Streptomyces viridochromogenes DSM 40736] Length = 292 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 13/201 (6%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ R++ ++A+++ + G+ + + P +++ PA P+ + Sbjct: 61 SLTRILSGFLLAAVLGVATGVLVARSRLAEDLLGPVLEVIRPIPAIALVPVAILLFP--- 117 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + + + + +L + A ++E + WR ++LPG P Sbjct: 118 -SNEQGIVFITCTAAFFPVLVSTRHAVRALTPVWEEAVRTMGGGRWRILGSVVLPGALPG 176 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 G G +W I +E+ S + G+G + +P V +G++ + Sbjct: 177 VFGGLSVGIGVSWICVISAEMISGQY------GVGYRTWQDYTVVDYPGVFVGMVTIGVL 230 Query: 566 VLALN---RFLWHPLYLYGTR 583 + L L + R Sbjct: 231 GWLTSTAVELLGRRLTRWLPR 251 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 90/250 (36%), Gaps = 17/250 (6%) Query: 35 LLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR 94 L + D+ L + + R+LS +++ + L A+SR Sbjct: 28 LWLRFSQFPTVTDVARAFAARLSGPDYWTDLTDSLTRILSGFLLAAVLGVATGVLVARSR 87 Query: 95 RLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSM 154 +L P+L++++ IP + + ++ F E +F T+ + + S Sbjct: 88 LAEDLLGPVLEVIRPIPAIALVPVAILLF--------PSNEQGIVFITCTAAFFPVLVST 139 Query: 155 YQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIV 214 ++ + EE R+ W+ + +P ++PG+ + + + W V+++EMI Sbjct: 140 RHAVRALTPVWEEAVRTMGGGRWRILGSVVLPGALPGVFGGLSVGIGVSWICVISAEMIS 199 Query: 215 VGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ---LLFRPMIVWSNKFR 271 G+G D + M+T+ + +L LL R + W + Sbjct: 200 G------QYGVGYRTWQDYTVVDYPGVFVGMVTIGVLGWLTSTAVELLGRRLTRWLPRTA 253 Query: 272 LERTTGIYPA 281 Sbjct: 254 YVPGARPPRP 263 >gi|296103049|ref|YP_003613195.1| alkanesulfonate transporter permease subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057508|gb|ADF62246.1| alkanesulfonate transporter permease subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 263 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 82/239 (34%), Gaps = 17/239 (7%) Query: 339 RVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRVV 391 R + ++ +A W S + + + + + I+ +R V Sbjct: 11 RAAPWFLPVGIVLIWQLASSTGWLSNRILPSPEGVIEAFWSLSASGELWQHLAISSWRAV 70 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 + I I + +G+ G + Q+L P PLV+ Sbjct: 71 IGFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGI----DESA 126 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 L+ GT + I N G E+A S+ ++G+ + ++LPG P + G Sbjct: 127 KIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFINVLLPGALPSIMVGVR 186 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S +G+G + E VV+ +++ + Sbjct: 187 FALGLMWLTLIVAETIS------ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 102/257 (39%), Gaps = 18/257 (7%) Query: 18 NIFDLLAFVLVIGIINILLHGIQE-TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 F + VL+ + + P +++ L Q+ + ++ R + Sbjct: 14 PWFLPVGIVLIWQLASSTGWLSNRILPSPEGVIEAFWSLSASGELWQHLAISSWRAVIGF 73 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 I ++ SR +L + +++++P L + +++F E Sbjct: 74 SIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ES 125 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 A IF + ++ + + + + NI R L E++RS+ LSG+ F + +P ++P ++ + Sbjct: 126 AKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFINVLLPGALPSIMVGV 185 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 ++ W ++ +E I GIG A + ++ A++ + L D Sbjct: 186 RFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239 Query: 257 ---QLLFRPMIVWSNKF 270 Q L R + W+ + Sbjct: 240 VSAQWLERSWLRWNPAY 256 >gi|315291003|gb|EFU50368.1| ABC transporter, permease protein [Escherichia coli MS 153-1] Length = 327 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + +V I + A T +L+A++ + Sbjct: 74 LLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI 133 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 134 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 190 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 191 A-----LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 245 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 246 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 296 Score = 85.4 bits (210), Expect = 3e-14, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 16/235 (6%) Query: 343 MLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCIT-----MFRVVVLIIIA 397 +L V V IAWQ G + T ++ + +G + + V+ ++ Sbjct: 73 LLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFC 132 Query: 398 SIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMI 457 +I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 133 IVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTI 188 Query: 458 FGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGA 517 I+ I G + P D E + SF + + + LP P + G A Sbjct: 189 IFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLA 248 Query: 518 WNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + +++ + + G GLG + + +G + + + L+R Sbjct: 249 LSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 296 >gi|123444121|ref|YP_001008091.1| taurine transporter subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091082|emb|CAL13965.1| putative taurine transport system permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 267 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ ++ A + +P GI +G + + P ++ P + PL+V Sbjct: 73 AASLGRILIALLAAVALGVPTGIAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGI 132 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ I +AG + A + + W+ ++ILP Sbjct: 133 GETSK----ILLIYLAIFAPITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSAL 188 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 189 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 242 Query: 564 CFVLALN---RFLWHPLYLY 580 + R + L + Sbjct: 243 IIAFGMELSLRAIQRRLTPW 262 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 104/242 (42%), Gaps = 17/242 (7%) Query: 28 VIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 +G+I+ L + + + +V P +L Q+ + + R+L A++ ++ Sbjct: 35 ALGLISPLFLPAPQQVLHQLLVIASPQGFMDATLWQHLAASLGRILIALLAAVALGVPTG 94 Query: 88 TLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQV 147 S + VL P+++I + +P L +L V++F E + I I+ + Sbjct: 95 IAMGLSSTVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILLIYLAIF 146 Query: 148 WNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFV 207 +T + + ++ + +R+ S WQ W++ +P ++P ++ + + + GW + Sbjct: 147 APITLAAVAGVRSVAQVRVRAARALGASRWQVLWFVILPSALPEILTGIRIGLGVGWSTL 206 Query: 208 VASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQLLFRPMI 264 VA+E+I G+G + A + ++ + + + F L + + R + Sbjct: 207 VAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLT 260 Query: 265 VW 266 W Sbjct: 261 PW 262 >gi|21226143|ref|NP_632065.1| glycine betaine transporter, permease [Methanosarcina mazei Go1] gi|20904368|gb|AAM29737.1| Glycine betaine transporter, permease protein [Methanosarcina mazei Go1] Length = 276 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 16/234 (6%) Query: 26 VLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASRTTLRMLSAMVISLLFTF 84 ++ +I L + + + + V + L + L + T ++S+ ++L+ Sbjct: 51 LIFALLIAALAYFTGKKNLKLAVGTFVGLLLIENLRLWTLSMETLSLVISSAFLALVIGI 110 Query: 85 VYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFT 144 LAAKS VL PILD+MQ++P +L +++F G V G +FA+ Sbjct: 111 PLGILAAKSDFFFNVLKPILDLMQTMPSFVYLIPALIFFGL---GNVPGMIATLVFAMP- 166 Query: 145 SQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGW 204 + +PR+L+EV+ +F + WQK + +P ++P ++ + + Sbjct: 167 ----PTIRLTNLGIRQVPRELKEVADAFGSTPWQKLVKVELPAALPTIMAGVNQCIMLSL 222 Query: 205 FFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI G+G + I+ D+ A L ++ + + D++ Sbjct: 223 SMVVIAAMI-------GARGLGYQVLFGIQRVDIGLGFEAGLGIVILAVILDRI 269 Score = 76.9 bits (188), Expect = 9e-12, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 80/230 (34%), Gaps = 14/230 (6%) Query: 346 IFWFCVVCGVAIGIAWQSIGYIVNHF---TYQDVLYVIWLGCITMFRVVVLIIIASIIWI 402 + + ++ +A +++ V F + L + L T+ V+ +A +I I Sbjct: 51 LIFALLIAALAYFTGKKNLKLAVGTFVGLLLIENLRLWTLSMETLSLVISSAFLALVIGI 110 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+GI + ++P L+ P+ V+ + ++ + + Sbjct: 111 PLGILAAKSDFFFNVLKPILDLMQTMPSFVYLIPALIFFGLGNVPGMIATLVF----AMP 166 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + G P + KEVA +F T W+ + LP P + G + + + Sbjct: 167 PTIRLTNLGIRQVPRELKEVADAFGSTPWQKLVKVELPAALPTIMAGVNQCIMLSLSMVV 226 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 ++ + GLG + ++ L + + L+R Sbjct: 227 IAAMIG-------ARGLGYQVLFGIQRVDIGLGFEAGLGIVILAVILDRI 269 >gi|237729637|ref|ZP_04560118.1| glycine betaine transporter membrane protein [Citrobacter sp. 30_2] gi|226908243|gb|EEH94161.1| glycine betaine transporter membrane protein [Citrobacter sp. 30_2] Length = 354 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V + ++ I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIILFALIAWQISGVGMGVATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 85.7 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 99/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T + ++ F + V + + P Sbjct: 63 PLDSWV------TEGIDWVVTHFRPVFQGIRVPVDYILNGFQQLLLGMPAPV-------- 108 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F +G+ ++ ++ + IT+ V+ ++ + Sbjct: 109 ---AIILFALIAWQISGVGMGVATLISLIAIGAIGAWSQAM----ITLALVLTALLFCVV 161 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ P + ++P + PA V+ +V N+ ++ I Sbjct: 162 IGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 217 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G + P D E + SF + + + LP P + G A + Sbjct: 218 ALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALS 277 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 278 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 >gi|138896247|ref|YP_001126700.1| putative aliphatic sulfonates ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|134267760|gb|ABO67955.1| Putative transport system permease protein of aliphatic sulfonates ABC transporter [Geobacillus thermodenitrificans NG80-2] Length = 261 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 100/258 (38%), Gaps = 19/258 (7%) Query: 19 IFDLLAFVLVI--GIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAM 76 + L +LV G + + P D+V L+ L Q+ S + R L Sbjct: 16 PWGLPIVLLVAWQGAVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQHLSISFGRALIGF 75 Query: 77 VISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAEL 136 I FV L R +L + ++++IP L + +++F E Sbjct: 76 AIGGSLGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVILWFGIG--------EE 127 Query: 137 AAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNM 196 A +F + ++ + + + N+ L E+ R + L WQ FW + +P ++ ++ + Sbjct: 128 AKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMGRVYGLRPWQLFWRIWLPGALSSILVGL 187 Query: 197 MMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD 256 ++ W ++ +E I GIG A + +++++L L D Sbjct: 188 RYALGIMWLTLIVAETIA------ADRGIGYLAMNAREFMQTDVVVFSILLYALFGKLAD 241 Query: 257 ---QLLFRPMIVWSNKFR 271 + L + + W+ ++ Sbjct: 242 SIARFLEKRWLRWNVNYQ 259 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 80/262 (30%), Gaps = 21/262 (8%) Query: 329 ENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT-------YQDVLYVIW 381 ++ + V + L I G A+ W S + + + Sbjct: 4 SKKVKWIHEKVVPWGLPIVLLVAWQG-AVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQ 62 Query: 382 LGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCV 441 I+ R ++ I + +G+ G + Q++ P PLV+ Sbjct: 63 HLSISFGRALIGFAIGGSLGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVILWF 122 Query: 442 SYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPG 501 L+ G + I N + G E+ + + W+ + I LPG Sbjct: 123 GIG----EEAKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMGRVYGLRPWQLFWRIWLPG 178 Query: 502 IFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLI 561 + G A G W IV+E + G+G + E VV +L+ Sbjct: 179 ALSSILVGLRYALGIMWLTLIVAETIA------ADRGIGYLAMNAREFMQTDVVVFSILL 232 Query: 562 MCCFVLALN---RFLWHPLYLY 580 F + RFL + Sbjct: 233 YALFGKLADSIARFLEKRWLRW 254 >gi|306846035|ref|ZP_07478601.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO1] gi|306273524|gb|EFM55375.1| binding-protein-dependent transport systems inner membrane component [Brucella sp. BO1] Length = 295 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 + Q A RT + V+S++ L A+S RL ++ PILD+MQ++P +L V Sbjct: 96 MWQDAMRTISMIFVCTVLSIIIGLPIGILMARSERLQRIINPILDVMQTMPSFVYLIPVV 155 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 + G+V G I+AI + + + +D+ E + +F S QK Sbjct: 156 MLLG---IGRVPGLIAVVIYAIP-----PIIRLTNLGIRLVDKDVLEAADAFGSSNIQKL 207 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + + +P ++P ++ + ++ VV + MI V G+G + AI Q Sbjct: 208 FKVQLPLALPTIMAGINQTIMMALAMVVIASMIGV-------QGLGQPVLKAIANQYFTL 260 Query: 241 ILYAMLTMLGVIFLYDQL 258 ++ L ++G+ ++D++ Sbjct: 261 GIFNGLAIVGIAIIFDRV 278 Score = 67.3 bits (163), Expect = 7e-09, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 89/280 (31%), Gaps = 18/280 (6%) Query: 292 TNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCV 351 + I F + ++ L Q ++ +L I W Sbjct: 16 RMLKQTIDEGFRTFTRGYGDAIENFFSPLQKFLLISERFMTQTPWPIILAIILAIAWVAS 75 Query: 352 VCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFR 411 + A ++ I +QD + T+ + V +++ II +P+GI + Sbjct: 76 RSVRVVLSALITLFLIGYFDMWQDAMR-------TISMIFVCTVLSIIIGLPIGILMARS 128 Query: 412 PHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAG 471 + I P ++ P+ V+ VV + + + + + I I+ G Sbjct: 129 ERLQRIINPILDVMQTMPSFVYLIPVVMLLGIGRVPGLIAVVIYAI----PPIIRLTNLG 184 Query: 472 ASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGH 531 D E A +F + + + LP P + G A +++ + Sbjct: 185 IRLVDKDVLEAADAFGSSNIQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG--- 241 Query: 532 IHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ F + L + + +R Sbjct: 242 ----VQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDR 277 >gi|222086242|ref|YP_002544774.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter K84] gi|221723690|gb|ACM26846.1| aliphatic sulphonate ABC transporter [Agrobacterium radiobacter K84] Length = 278 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 96/268 (35%), Gaps = 17/268 (6%) Query: 7 LPPFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYAS 66 P R P + + ++ + P +V T LP Sbjct: 24 RPVISLERFLPFLLPAVVIAAWQLGSSVGWISTRIMPSPAAVVLAFWQTTISGQLPHNIL 83 Query: 67 RTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNL 126 + R + +++ F+ SR + L ++++IP L + +++F Sbjct: 84 VSAGRAFAGLLVGGSIGFLLGIANGVSRLSEKLTDTTLQMLRTIPHLAMVPLVILWFGIG 143 Query: 127 YPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVP 186 E + +F ++ + + Y + N+ R L E+ R + +S W F + P Sbjct: 144 --------EESKLFLTALGVLFPIYLNTYHGVRNVDRGLIEMGRVYGMSNWTLFKKVIFP 195 Query: 187 FSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 ++P ++ + ++ W ++ +E I GIG A + ++ ++ Sbjct: 196 GALPSILVGLRFALGIMWLTLIVAESIAASS------GIGYMANNAREFGMTDVVVLTLV 249 Query: 247 TMLGVIFLYD---QLLFRPMIVWSNKFR 271 + L D + L R + W+ ++ Sbjct: 250 IYAVLGKLADVVARALERRALRWNPAYQ 277 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 80/262 (30%), Gaps = 17/262 (6%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIG-------YIV 368 R R + + S +R L + + W S ++ Sbjct: 8 FVRVTAQSRARPAKQARPVISLERFLPFLLPAVVIAAWQLGSSVGWISTRIMPSPAAVVL 67 Query: 369 NHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAF 428 + + ++ R +++ I +GI G Q+L Sbjct: 68 AFWQTTISGQLPHNILVSAGRAFAGLLVGGSIGFLLGIANGVSRLSEKLTDTTLQMLRTI 127 Query: 429 PANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHI 488 P PLV+ + L G + I N G E+ + + Sbjct: 128 PHLAMVPLVILWFGIGEESK----LFLTALGVLFPIYLNTYHGVRNVDRGLIEMGRVYGM 183 Query: 489 TGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTE 548 + W ++ +I PG P + G A G W IV+E + ++G+G + E Sbjct: 184 SNWTLFKKVIFPGALPSILVGLRFALGIMWLTLIVAESIA------ASSGIGYMANNARE 237 Query: 549 KGSFPEVVLGVLIMCCFVLALN 570 G VVL ++I + Sbjct: 238 FGMTDVVVLTLVIYAVLGKLAD 259 >gi|298290867|ref|YP_003692806.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gi|296927378|gb|ADH88187.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 284 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 76/231 (32%), Gaps = 22/231 (9%) Query: 348 WFCVVCGVAIGIAWQSIGYIVNHFTYQ------------DVLYVIWLGCITMFRVVVLII 395 WF + + IGY+ + + ++ R +V + Sbjct: 36 WFLPALLLVVWEVLSRIGYLAPNVLPAPSAVADAGWQVLKSGELFHHMAVSAARALVGLA 95 Query: 396 IASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLL 455 + I +GI G Q++ P PLV+ L Sbjct: 96 LGGSIGFALGIANGLSDLTHRYSDTTLQMIRNIPHLALIPLVILWFGIE----EEAKLFL 151 Query: 456 MIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACG 515 + G + I N + G + E+ ++ ++ W +R ++LPG P G A G Sbjct: 152 VALGVFFPIYINTLHGVRSVDPQLIEMGRAYGMSRWTLFRRVVLPGALPSIFVGLRFALG 211 Query: 516 GAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 W IV+E + +GLG ++ E VVL ++I Sbjct: 212 IMWLTLIVAETIA------AESGLGHMAMQAREFLLVDIVVLAIVIYALLG 256 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 98/272 (36%), Gaps = 23/272 (8%) Query: 3 LYNILPPFISRRIFPNIFDLLAFVLVIGIINILLH-GIQETTVPRDIVDIVPITLDVHSL 61 L+ I+ P ++V +++ + + P + D L L Sbjct: 25 LFARFEARIAGWFLP-----ALLLVVWEVLSRIGYLAPNVLPAPSAVADAGWQVLKSGEL 79 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 + + + R L + + F S L ++++IP L + ++ Sbjct: 80 FHHMAVSAARALVGLALGGSIGFALGIANGLSDLTHRYSDTTLQMIRNIPHLALIPLVIL 139 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 +F E A +F + + + + + ++ L E+ R++ +S W F Sbjct: 140 WFGIE--------EEAKLFLVALGVFFPIYINTLHGVRSVDPQLIEMGRAYGMSRWTLFR 191 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + +P ++P + + ++ W ++ +E I G+G A + + + Sbjct: 192 RVVLPGALPSIFVGLRFALGIMWLTLIVAETIA------AESGLGHMAMQAREFLLVDIV 245 Query: 242 LYAMLTMLGVIFLYD---QLLFRPMIVWSNKF 270 + A++ + + D QLL R + W F Sbjct: 246 VLAIVIYALLGKVADVATQLLERASLKWHPSF 277 >gi|167724288|ref|ZP_02407524.1| permease component of taurine ABC transporter [Burkholderia pseudomallei DM98] Length = 256 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 64 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 123 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 124 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 179 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 180 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 233 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 234 AIALALEIGLRALQRRLTPW 253 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 53 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 112 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 113 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 164 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 165 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 218 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 219 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 253 >gi|152971536|ref|YP_001336645.1| glycine betaine transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956385|gb|ABR78415.1| glycine/betaine/proline transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 355 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q +++ + +V I + A T +L+A++ + Sbjct: 102 LLGMPAPVAIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCM 161 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 162 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 219 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTL 273 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 99/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + +I F + + + + P Sbjct: 64 PLDSWV------THAIDWIVLHFRPLFQGIRVPIDYILSAFQQLLLGMPAPV-------- 109 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F ++G+ ++ ++ + + V+ ++ + Sbjct: 110 ---AIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCMV 162 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 163 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G + P D E + SF + + + LP P + G A + Sbjct: 219 ALPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 278 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324 >gi|161615705|ref|YP_001589670.1| glycine betaine transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365069|gb|ABX68837.1| hypothetical protein SPAB_03490 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 354 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q + V I ++ I + A T +L+A++ + Sbjct: 101 LLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCV 160 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 161 VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 217 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 218 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTL 272 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 273 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323 Score = 86.1 bits (212), Expect = 2e-14, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 100/303 (33%), Gaps = 21/303 (6%) Query: 272 LERTTGIYPADSWVLYLFRKT--NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPE 329 L P +L F KT ++ + + + + I F + Sbjct: 40 LNSAPAPTPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQ 99 Query: 330 NFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFR 389 L + + + I W G+ I I + IT+ Sbjct: 100 LLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAI--------GAIGAWSQAMITLAL 151 Query: 390 VVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPN 449 V+ ++ +I +P+GIW+ P + ++P + PA V+ +V N Sbjct: 152 VLTALLFCVVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIG----N 207 Query: 450 LWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTG 509 + ++ I I+ I G + P D E + SF + + + LP P + G Sbjct: 208 VPGVVVTIIFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAG 267 Query: 510 AITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLAL 569 A + +++ + + G GLG + + +G + + + L Sbjct: 268 VNQTLMLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIIL 320 Query: 570 NRF 572 +R Sbjct: 321 DRL 323 >gi|330501438|ref|YP_004378307.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina NK-01] gi|328915724|gb|AEB56555.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina NK-01] Length = 292 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 104/244 (42%), Gaps = 22/244 (9%) Query: 15 IFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLS 74 + P + L+A + +G+ I + T V ++ + + T S Sbjct: 46 MLPPAWLLIAIFVGLGLWRIGVRFAIFTAVAFVLIVMT-------GFWEQTVVTLGLTFS 98 Query: 75 AMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGA 134 + +ISLL AA+S R+ ++ PILD MQ++P +L + F G+V G Sbjct: 99 STLISLLLGIPLGIWAARSERVATIIRPILDFMQTMPAFVYLIPAAMLFGL---GRVPGI 155 Query: 135 ELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 IFA+ + + + +++ E +SF + Q + + +P +MP ++ Sbjct: 156 IATVIFAMPPA-----VRLTSLGIRQVNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIMA 210 Query: 195 NMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFL 254 + ++ V+ + M+ G G+G+ + +I+ D+ + + ++ + + Sbjct: 211 GVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGMAVVLLAII 263 Query: 255 YDQL 258 D++ Sbjct: 264 LDRI 267 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 16/227 (7%) Query: 351 VVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGC-----ITMFRVVVLIIIASIIWIPVG 405 ++ + +G+ IG FT + ++ G +T+ +I+ ++ IP+G Sbjct: 52 LLIAIFVGLGLWRIGVRFAIFTAVAFVLIVMTGFWEQTVVTLGLTFSSTLISLLLGIPLG 111 Query: 406 IWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYIL 465 IW +++ I+P + PA V+ + + + + Sbjct: 112 IWAARSERVATIIRPILDFMQTMPAFVYLIPAAMLFGLGRVPGIIATVIFAMPPAVRL-- 169 Query: 466 FNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSE 525 G + E SF T + + LP P + G A + I++ Sbjct: 170 --TSLGIRQVNKEIVEAGQSFGCTSRQLLFKVQLPNAMPSIMAGVNQTIMMALSMVIIAS 227 Query: 526 VASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + S ++ + + + L+R Sbjct: 228 MVGAG-------GLGNDVLASIQRLDIGLGFESGMAVVLLAIILDRI 267 >gi|239932917|ref|ZP_04689870.1| transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291441267|ref|ZP_06580657.1| transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291344162|gb|EFE71118.1| transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 308 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 98/256 (38%), Gaps = 11/256 (4%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASRTT 69 +SR++ P + + + V ++ + P D+ V +L Y + Sbjct: 51 LSRKVLPPVTAVALVLAVWQLLVWAEVAPDYKLPAPSDVWGEVTDAWRQGTLLDYVWTSV 110 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R L +++L L A+ + + + P+L +QS+P + ++ V++ Sbjct: 111 SRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPVLSGLQSLPSVAWVPPAVLWLGLNNSM 170 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 L A+ ++ + + IP R+ +G + Y+ +P ++ Sbjct: 171 MYAVILLGAVPSVAN--------GLVAGIDQIPPLFLRAGRTLGATGLRGARYVVMPAAL 222 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 PG + + + W ++A+E+I + G+G + + + A+ +L Sbjct: 223 PGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV--GLGQLLENGRNNASIAQVFLAIFLIL 280 Query: 250 GVIFLYDQLLFRPMIV 265 V D L+F P+ Sbjct: 281 LVGIAIDLLIFSPLER 296 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 87/237 (36%), Gaps = 12/237 (5%) Query: 349 FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCI------TMFRVVVLIIIASIIWI 402 V + + +V G + ++ R ++ ++A I Sbjct: 66 LAVWQLLVWAEVAPDYKLPAPSDVWGEVTDAWRQGTLLDYVWTSVSRGLLGFLMALAIGT 125 Query: 403 PVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQW 462 P+G+ + + + + P L + P+ + P V + N + +++ G Sbjct: 126 PLGLLVARVKFVRAAVGPVLSGLQSLPSVAWVPPAVLWLGL----NNSMMYAVILLGAVP 181 Query: 463 YILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASI 522 + ++AG P F + TG R RY+++P P Y+ G +W + + Sbjct: 182 SVANGLVAGIDQIPPLFLRAGRTLGATGLRGARYVVMPAALPGYLAGLKQGWAFSWRSLM 241 Query: 523 VSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYL 579 +E+ + GLG + S +V L + ++ +A++ ++ PL Sbjct: 242 AAEIIASSPDLGV--GLGQLLENGRNNASIAQVFLAIFLILLVGIAIDLLIFSPLER 296 >gi|170748909|ref|YP_001755169.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] gi|170655431|gb|ACB24486.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] Length = 283 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 15/198 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L Q T + + A V++LL A SR V P+LD+MQ++P +L + Sbjct: 87 LWQSTVETLVLVSLATVMALLIGIPVGIWFALSRWAWKVFSPVLDMMQTLPSFVYLIPAL 146 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 +F ++A FA V + + N+P +L E S +F S QK Sbjct: 147 PFFGLG--------AVSACFATIIFSVPPVIRLTTLGIRNVPTELIEASDAFGGSATQKL 198 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P ++P ++ + +M VV + MI G G+G + +I+ + A Sbjct: 199 LKVQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGREVWQSIQRLEAGA 251 Query: 241 ILYAMLTMLGVIFLYDQL 258 A L ++ + + D+ Sbjct: 252 GFEAGLGIVILAVILDRF 269 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 86/256 (33%), Gaps = 15/256 (5%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIG---IAWQSIGYIVNHFTYQDVL 377 G + + + ++ + + V+ A+ + + +G + Sbjct: 25 GAWLTRAVSRSVSNGIDTLTAALISVPPWAVIAVAALATYKVGGRKVGLLTLAGLLFLWD 84 Query: 378 YVIWLGCI-TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 +W + T+ V + ++A +I IPVGIW P ++ P+ V+ Sbjct: 85 LRLWQSTVETLVLVSLATVMALLIGIPVGIWFALSRWAWKVFSPVLDMMQTLPSFVYLIP 144 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 + ++ + + ++ G P + E + +F + + Sbjct: 145 ALPFFGLGAVSACFATIIF----SVPPVIRLTTLGIRNVPTELIEASDAFGGSATQKLLK 200 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 + LP P + G A + +++ + G GLG + +S ++ Sbjct: 201 VQLPLALPTIMAGVNQTMMLALSMVVIAAMIGAG-------GLGREVWQSIQRLEAGAGF 253 Query: 557 LGVLIMCCFVLALNRF 572 L + + L+RF Sbjct: 254 EAGLGIVILAVILDRF 269 >gi|167743261|ref|ZP_02416035.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei 14] Length = 254 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 62 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 121 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 122 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 177 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 178 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 231 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 232 AIALALEIGLRALQRRLTPW 251 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 51 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 110 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 111 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 162 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 163 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 216 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 217 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 251 >gi|329940251|ref|ZP_08289533.1| transport system integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329301077|gb|EGG44973.1| transport system integral membrane protein [Streptomyces griseoaurantiacus M045] Length = 307 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 10/232 (4%) Query: 40 QETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMV 99 + P + D V L Y + R L + +L L A+ + + Sbjct: 80 SKLPSPSAVWDEVHEAWLRGDLLGYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAA 139 Query: 100 LVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLC 159 + PIL +QS+P + ++ V++ I V ++ + + Sbjct: 140 IGPILSGLQSLPSVAWVPPAVIWLGLDNSMMYA--------VILLGAVPSIANGLVSGVD 191 Query: 160 NIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTV 219 +P R+ +G + W++ +P ++PG V + + W ++A+E+I Sbjct: 192 QVPPLFLRAGRTMGATGLKGTWHIVLPAALPGYVAGLKQGWAFSWRSLMAAEIIA--SFP 249 Query: 220 IPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 G+G + D+ + A+L +L V D L+F P+ W + R Sbjct: 250 DLGVGLGQLLENGRNASDMSMVFEAILLILVVGIAIDLLIFSPLERWVLRSR 301 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 6/207 (2%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ R ++ + A I P+G+ + + + I P L + P+ + P Sbjct: 99 GDLLGYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPILSGLQSLPSVAWVPP 158 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + N + +++ G I +++G P F + TG + + Sbjct: 159 AVIWLGL----DNSMMYAVILLGAVPSIANGLVSGVDQVPPLFLRAGRTMGATGLKGTWH 214 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP P YV G +W + + +E+ + GLG + V Sbjct: 215 IVLPAALPGYVAGLKQGWAFSWRSLMAAEIIASFPDLGV--GLGQLLENGRNASDMSMVF 272 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583 +L++ +A++ ++ PL + R Sbjct: 273 EAILLILVVGIAIDLLIFSPLERWVLR 299 >gi|238797256|ref|ZP_04640757.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] gi|238718893|gb|EEQ10708.1| Taurine ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] Length = 255 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+++ + A + +P GI +G P + + + P ++ P + PL+V Sbjct: 61 AASLGRILIALFAAVALGVPTGIAMGLSPRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + +AG + A + + W+ R+++LP Sbjct: 121 GETSK----ILLIYLAIFAPVTLAAVAGVRSVAQVRVRAARALGASRWQVLRFVVLPSAL 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG G W+ + +E+ + T GLG + + E + V+ G+ ++ Sbjct: 177 PEILTGIRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIA 230 Query: 564 CFVLALN---RFLWHPLYLY 580 + R + L + Sbjct: 231 IIAFGMELSLRAIQRRLTPW 250 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 103/248 (41%), Gaps = 17/248 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 L V + +I+ L + + + V P +L Q+ + + R+L A+ ++ Sbjct: 17 LWWAVTALQLISPLFLPAPQQVLHQLWVIASPQGFMDATLWQHLAASLGRILIALFAAVA 76 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S R+ VL P+++I + +P L +L V++F E + I Sbjct: 77 LGVPTGIAMGLSPRVRAVLDPLIEIYRPVPPLAYLPLMVIWFGIG--------ETSKILL 128 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + +T + + ++ + +R+ S WQ ++ +P ++P ++ + + + Sbjct: 129 IYLAIFAPVTLAAVAGVRSVAQVRVRAARALGASRWQVLRFVVLPSALPEILTGIRIGLG 188 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF---LYDQL 258 GW +VA+E+I G+G + A + ++ + + + F L + Sbjct: 189 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRA 242 Query: 259 LFRPMIVW 266 + R + W Sbjct: 243 IQRRLTPW 250 >gi|167850265|ref|ZP_02475773.1| permease component of taurine ABC transporter [Burkholderia pseudomallei B7210] Length = 252 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 60 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 119 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 120 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 175 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 176 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 229 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 230 AIALALEIGLRALQRRLTPW 249 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 49 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 108 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 109 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 160 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 161 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 214 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 215 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 249 >gi|209520159|ref|ZP_03268932.1| choline ABC transporter, permease protein [Burkholderia sp. H160] gi|209499423|gb|EDZ99505.1| choline ABC transporter, permease protein [Burkholderia sp. H160] Length = 300 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 89/191 (46%), Gaps = 15/191 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LS+ VISL+ AKSR + M++ P+LD+MQ++P +L + F Sbjct: 91 TLGLTLSSTVISLVLGVPLGIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G+V G IFA+ + + ++ ++ E ++F + WQ + + P Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTALGIKHVNHEIVEAGQAFGCTPWQLLYKVQFPN 202 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P ++ + ++ V+ + M+ G G+G+ + +I+ D+ + ++ Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGMS 255 Query: 248 MLGVIFLYDQL 258 ++ + + D++ Sbjct: 256 VVMLAIILDRI 266 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 75/228 (32%), Gaps = 14/228 (6%) Query: 348 WFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 W + V IG+ W+ + + IT+ + +I+ ++ +P+ Sbjct: 50 WALMAFFVGIGLWRVGWRFALFTLAALLLIYGTGFWDQMVITLGLTLSSTVISLVLGVPL 109 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW+ + ++P L+ PA V+ + L + + Sbjct: 110 GIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL- 168 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 G ++ E +F T W+ + P P +TG A + I++ Sbjct: 169 ---TALGIKHVNHEIVEAGQAFGCTPWQLLYKVQFPNALPSIMTGVNQTIMMALSMVIIA 225 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + S ++ + + + L+R Sbjct: 226 SMVGAG-------GLGNDVLASIQRLDIGLGFESGMSVVMLAIILDRI 266 >gi|223934499|ref|ZP_03626420.1| binding-protein-dependent transport systems inner membrane component [bacterium Ellin514] gi|223896962|gb|EEF63402.1| binding-protein-dependent transport systems inner membrane component [bacterium Ellin514] Length = 348 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 77/211 (36%), Gaps = 19/211 (9%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ +V+ +++S++ +P+GI G + +PF + PA F L V+ + Sbjct: 127 SIRTIVLGFLVSSLLGVPLGILCGTYRFFAKLQEPFIEFFRYLPAPAFGALCVAVLGI-- 184 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 + +++ GT + + + E A + +GW+ R II+P Sbjct: 185 --DDPPKVAIIVIGTFFQQVLIIANTVRKVDPALLEAAQTLGASGWKLVRRIIIPAAITD 242 Query: 506 YVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCF 565 T G AW IV+EV +G+ +I + +F V + ++ Sbjct: 243 IYTDMRILLGWAWTYLIVAEVVG------TMSGITYFINQQARYRNFDNVYAAIGMIGII 296 Query: 566 VLALNRFL---------WHPLYLYGTRCLRL 587 + + L W R L Sbjct: 297 GFSTDLVLAWLGTILFPWKRKTRTAARRFAL 327 Score = 94.2 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 73/199 (36%), Gaps = 14/199 (7%) Query: 61 LPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTV 120 L + + ++ ++S L L R + P ++ + +P F V Sbjct: 120 LHESLGHSIRTIVLGFLVSSLLGVPLGILCGTYRFFAKLQEPFIEFFRYLPAPAFGALCV 179 Query: 121 VYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKF 180 P K + I + + ++ + L E +++ SGW+ Sbjct: 180 AVLGIDDPPK--------VAIIVIGTFFQQVLIIANTVRKVDPALLEAAQTLGASGWKLV 231 Query: 181 WYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLA 240 + +P ++ + +M + + W +++ +E++ + GI +I + ++ Sbjct: 232 RRIIIPAAITDIYTDMRILLGWAWTYLIVAEVVG------TMSGITYFINQQARYRNFDN 285 Query: 241 ILYAMLTMLGVIFLYDQLL 259 + A+ + + F D +L Sbjct: 286 VYAAIGMIGIIGFSTDLVL 304 >gi|187733136|ref|YP_001879072.1| taurine transporter subunit [Shigella boydii CDC 3083-94] gi|187430128|gb|ACD09402.1| taurine uptake ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|320174742|gb|EFW49872.1| Taurine transport system permease protein TauC [Shigella dysenteriae CDC 74-1112] Length = 275 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 102/269 (37%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 102/249 (40%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWTVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVV 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L P++++ + + L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|148254013|ref|YP_001238598.1| putative taurine ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146406186|gb|ABQ34692.1| Putative taurine ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 282 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 106/250 (42%), Gaps = 17/250 (6%) Query: 23 LAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLF 82 L +++ I L V ++ + + +L Q+ + R+++A++ +++ Sbjct: 46 LWWLVAAAQIVPPLFLPSPLAVLGKLISVSADGFEGATLIQHTLASLARIVAALLAAIVV 105 Query: 83 TFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAI 142 + A S R ++ P+L+ + IP L +L +++F E A + I Sbjct: 106 GTLTGLAIALSPRARGIIEPLLEFYRPIPPLAYLPLVIIWFGIG--------EFAKVLVI 157 Query: 143 FTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSG 202 + + ++ + L ++ D +RS S WQ + +P ++P ++ + + + Sbjct: 158 YLGILPSIVIATVDGLRSVAPDRVNAARSLGASRWQVIGLVLLPHALPSILTGIRIGLGT 217 Query: 203 GWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QLL 259 GW +VA+E++ G+G I A ++ +L + + F + +++ Sbjct: 218 GWATLVAAELVA------ATRGLGFMIKGASDFLVTDVVVLGILVIAVIAFALELALRVV 271 Query: 260 FRPMIVWSNK 269 R ++ W + Sbjct: 272 QRVLVPWQGR 281 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 10/196 (5%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + +I ++ R+V ++ A ++ G+ I P I+P + P + Sbjct: 80 EGATLIQHTLASLARIVAALLAAIVVGTLTGLAIALSPRARGIIEPLLEFYRPIPPLAYL 139 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PLV+ L++ G I+ + G + D A S + W+ Sbjct: 140 PLVIIWFGIG----EFAKVLVIYLGILPSIVIATVDGLRSVAPDRVNAARSLGASRWQVI 195 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++LP P +TG G W + +E+ + T GLG I +++ Sbjct: 196 GLVLLPHALPSILTGIRIGLGTGWATLVAAELVA------ATRGLGFMIKGASDFLVTDV 249 Query: 555 VVLGVLIMCCFVLALN 570 VVLG+L++ AL Sbjct: 250 VVLGILVIAVIAFALE 265 >gi|294632482|ref|ZP_06711042.1| taurine transport system permease TauC [Streptomyces sp. e14] gi|292835815|gb|EFF94164.1| taurine transport system permease TauC [Streptomyces sp. e14] Length = 284 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 92/270 (34%), Gaps = 25/270 (9%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVL--- 377 G + P L + + + + +A W + + Sbjct: 13 GKVPVPRPRRALSRARRVALPFGSLLLFLAGWQLLAASGTWSQTLVPPPAKVWDAFVDVS 72 Query: 378 ------------YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLL 425 Y++ I++ R+ I + G+ +G + S +P+ L Sbjct: 73 TTHDGVRGYNGTYLVEHLGISLRRIAFGAGIGIAAGVVFGLLMGTVGWLRSLFEPWITFL 132 Query: 426 AAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASS 485 P +F L++ + L+ + + +A P+ E A + Sbjct: 133 RTLPPLAYFSLLIIWLGI----NEEPKITLLAVAAFPPVAVSTTTAVAAVPSSLVEAARA 188 Query: 486 FHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAE 545 + W + +I+P P +TG A G A+++ + +E+ + G+G + + Sbjct: 189 LGGSRWDVVKDVIVPSALPETLTGVRLAVGVAYSSLVAAELVNG------LPGIGGMVKD 242 Query: 546 STEKGSFPEVVLGVLIMCCFVLALNRFLWH 575 + + P V++G++ + L ++ L Sbjct: 243 AANYNNTPVVLVGIIAIGVSGLVIDGLLLR 272 Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 95/260 (36%), Gaps = 24/260 (9%) Query: 12 SRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHS----------L 61 +RR+ LL F+ ++ Q P V + + L Sbjct: 27 ARRVALPFGSLLLFLAGWQLLAASGTWSQTLVPPPAKVWDAFVDVSTTHDGVRGYNGTYL 86 Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 ++ + R+ I + V+ L L + P + ++++P L + + ++ Sbjct: 87 VEHLGISLRRIAFGAGIGIAAGVVFGLLMGTVGWLRSLFEPWITFLRTLPPLAYFSLLII 146 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + E I + + + S ++ +P L E +R+ S W Sbjct: 147 WLGIN--------EEPKITLLAVAAFPPVAVSTTTAVAAVPSSLVEAARALGGSRWDVVK 198 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 + VP ++P + + +++ + +VA+E++ LPGIG + A + + Sbjct: 199 DVIVPSALPETLTGVRLAVGVAYSSLVAAELV------NGLPGIGGMVKDAANYNNTPVV 252 Query: 242 LYAMLTMLGVIFLYDQLLFR 261 L ++ + + D LL R Sbjct: 253 LVGIIAIGVSGLVIDGLLLR 272 >gi|110640632|ref|YP_668360.1| taurine transporter subunit [Escherichia coli 536] gi|170683056|ref|YP_001742499.1| taurine transporter subunit [Escherichia coli SMS-3-5] gi|191173479|ref|ZP_03035006.1| taurine uptake ABC transporter, permease protein [Escherichia coli F11] gi|215485455|ref|YP_002327886.1| taurine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|300936349|ref|ZP_07151277.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300997448|ref|ZP_07181788.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|312964620|ref|ZP_07778871.1| taurine transport system permease protein tauC [Escherichia coli 2362-75] gi|331645540|ref|ZP_08346644.1| taurine transport system permease protein TauC [Escherichia coli M605] gi|331671925|ref|ZP_08372721.1| taurine transport system permease protein TauC [Escherichia coli TA280] gi|331681761|ref|ZP_08382394.1| taurine transport system permease protein TauC [Escherichia coli H299] gi|110342224|gb|ABG68461.1| taurine transport system permease protein TauC [Escherichia coli 536] gi|170520774|gb|ACB18952.1| taurine uptake ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|190906188|gb|EDV65800.1| taurine uptake ABC transporter, permease protein [Escherichia coli F11] gi|215263527|emb|CAS07855.1| taurine transporter subunit TauC, membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|281177541|dbj|BAI53871.1| taurine ABC transporter permease component [Escherichia coli SE15] gi|300304267|gb|EFJ58787.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300458455|gb|EFK21948.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|312290641|gb|EFR18519.1| taurine transport system permease protein tauC [Escherichia coli 2362-75] gi|324010127|gb|EGB79346.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324010718|gb|EGB79937.1| ABC transporter, permease protein [Escherichia coli MS 60-1] gi|330910161|gb|EGH38671.1| taurine transport system permease protein TauC [Escherichia coli AA86] gi|331045702|gb|EGI17828.1| taurine transport system permease protein TauC [Escherichia coli M605] gi|331070914|gb|EGI42273.1| taurine transport system permease protein TauC [Escherichia coli TA280] gi|331080963|gb|EGI52128.1| taurine transport system permease protein TauC [Escherichia coli H299] Length = 275 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 19/268 (7%) Query: 322 VIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDVL 377 +++ +P + S ++ +L ++W + + Q + ++ Q + Sbjct: 13 RLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFM 72 Query: 378 YVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFP 435 ++ R+++ ++ A +I IPVGI +G P + + P +L P + P Sbjct: 73 DATLWQHLAASLTRILLALLAAVLIGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLP 132 Query: 436 LVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWR 495 L+V + LL+ + + +AG + A S + + Sbjct: 133 LMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLW 188 Query: 496 YIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEV 555 ++ILPG P +TG G W+ + +E+ + T GLG + + E + V Sbjct: 189 FVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVV 242 Query: 556 VLGVLIMCCFVLALN---RFLWHPLYLY 580 + G+ ++ L R L L + Sbjct: 243 LAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ L + + + + P +L Q+ + + R+L A++ ++L Sbjct: 37 VWWAVAALQLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRILLALLAAVL 96 Query: 82 FTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFA 141 S + +L PI+++ + +P L +L V++F E + I Sbjct: 97 IGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIG--------ETSKILL 148 Query: 142 IFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMS 201 I+ + + S + + + ++S S Q W++ +P ++P ++ + + + Sbjct: 149 IYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLG 208 Query: 202 GGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYD---QL 258 GW +VA+E+I G+G + A + +L + + + FL + + Sbjct: 209 VGWSTLVAAELIA------ATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRA 262 Query: 259 LFRPMIVWS 267 L R + W Sbjct: 263 LQRRLTPWH 271 >gi|116696181|ref|YP_841757.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530680|emb|CAJ97027.1| ABC-type transporter, permease component: TauT family [Ralstonia eutropha H16] Length = 281 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 92/244 (37%), Gaps = 20/244 (8%) Query: 332 LQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVV 391 QL S+ R L F + AWQ + ++ +++RV Sbjct: 42 WQLASSHRAHLGLVTFANVPAPSDVVPAAWQLL----------QSPKLVLHLSNSLYRVF 91 Query: 392 VLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLW 451 A++ I +G+ IG + + P ++L P + PL + L+ Sbjct: 92 AGFGAAAVAGIVLGMAIGRSRWLEDLLLPPLEVLRPIPGVAWIPLAILMFPSSELS---- 147 Query: 452 LSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAI 511 + + G + IL N I G A S W + ++LP P VTG Sbjct: 148 MIFITFIGALFPILLNTIHGVERTDPRLVATARSLGARRWTVFPEVLLPAALPSIVTGLA 207 Query: 512 TACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 G +W + +E+ + + G+G Y E+ ++ ++V+G+L++ F + + Sbjct: 208 IGMGTSWFCLVTAEMIAGQY------GIGYYTWEAYNLQNYADIVVGMLLIGAFGMGSSA 261 Query: 572 FLWH 575 + Sbjct: 262 LIKR 265 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 15/224 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P D+V L L + S + R+ + + + V +SR L +L+P Sbjct: 61 PAPSDVVPAAWQLLQSPKLVLHLSNSLYRVFAGFGAAAVAGIVLGMAIGRSRWLEDLLLP 120 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L++++ IP + ++ ++ F +EL+ IF F ++ + + + Sbjct: 121 PLEVLRPIPGVAWIPLAILMF--------PSSELSMIFITFIGALFPILLNTIHGVERTD 172 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L +RS W F + +P ++P +V + + M WF +V +EMI Sbjct: 173 PRLVATARSLGARRWTVFPEVLLPAALPSIVTGLAIGMGTSWFCLVTAEMIAG------Q 226 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVW 266 GIG Y A Q+ I+ ML + L+ + + W Sbjct: 227 YGIGYYTWEAYNLQNYADIVVGMLLIGAFGMGSSALI-KRLGAW 269 >gi|294084957|ref|YP_003551717.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664532|gb|ADE39633.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322] Length = 296 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 + + T + A +I + F L A+S R ++ PILDIMQ+IP +L Sbjct: 95 GMWEDTMATLAIISVATLICIGFGIPLGILMARSNRAQSIITPILDIMQTIPSFVYLIPV 154 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V+ GKV G I+AI + + + +++ E + +F + Q+ Sbjct: 155 VMLLG---IGKVPGMIAVCIYAIP-----PIVRLTNLGIRLVDKEVLEAADAFGANYKQR 206 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + + +P ++P + + ++ VV + MI V G+G + A+ Q L Sbjct: 207 LFGVQIPLALPNIFAGVNQTIMMALAMVVIASMIGV-------KGLGVPVLQAVANQYLA 259 Query: 240 AILYAMLTMLGVIFLYDQL 258 L L ++ + ++D++ Sbjct: 260 LGLMNGLAIVALAIIFDRV 278 Score = 73.4 bits (179), Expect = 1e-10, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 86/278 (30%), Gaps = 29/278 (10%) Query: 294 FLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVC 353 F R G S +FF PL + + L V + + ++++ W + Sbjct: 29 FSRNYGESLESFFDPLLQFMIWFEKLLIVTPWPI-----IIGIIAGLAWLGSRSWKLALG 83 Query: 354 GVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH 413 + +I+ F + T+ + V +I IP+GI + Sbjct: 84 SIIAF-------FIIGRFGMWED------TMATLAIISVATLICIGFGIPLGILMARSNR 130 Query: 414 ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGAS 473 S I P ++ P+ V+ VV + + + + I+ G Sbjct: 131 AQSIITPILDIMQTIPSFVYLIPVVMLLGIGKVPGMIA----VCIYAIPPIVRLTNLGIR 186 Query: 474 AFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIH 533 + E A +F + + +P P G A +++ + Sbjct: 187 LVDKEVLEAADAFGANYKQRLFGVQIPLALPNIFAGVNQTIMMALAMVVIASMIG----- 241 Query: 534 LRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 GLG + ++ ++ L + + +R Sbjct: 242 --VKGLGVPVLQAVANQYLALGLMNGLAIVALAIIFDR 277 >gi|225181346|ref|ZP_03734790.1| binding-protein-dependent transport systems inner membrane component [Dethiobacter alkaliphilus AHT 1] gi|225167927|gb|EEG76734.1| binding-protein-dependent transport systems inner membrane component [Dethiobacter alkaliphilus AHT 1] Length = 280 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L T + +L A ISL+ A+S R+ + P+LD+MQ++P +L Sbjct: 83 GLWPDLLITFVLVLVATFISLVIGIPLGIACARSNRINSYVTPVLDLMQTMPAFVYLIPA 142 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 V++F + AI A F V + +P +L E + SF + QK Sbjct: 143 VMFFRVG--------SVPAIVATFIFSVPPTIRLTNLGIRQVPTELIEAADSFGATPRQK 194 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLL 239 + +P ++P ++ + + V + M+ G G+G + I+ D+ Sbjct: 195 LIKVQLPLALPTIMAGVNQCIMLALSMAVIAAMVGAG-------GLGRVVWSGIQTLDVG 247 Query: 240 AILYAMLTMLGVIFLYDQL 258 L ++ + + D++ Sbjct: 248 LGFEGGLAVVILAIILDRI 266 Score = 80.7 bits (198), Expect = 6e-13, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 70/202 (34%), Gaps = 11/202 (5%) Query: 371 FTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPA 430 F + L + IT V+V I+ +I IP+GI I+S + P L+ PA Sbjct: 76 FLLIENLGLWPDLLITFVLVLVATFISLVIGIPLGIACARSNRINSYVTPVLDLMQTMPA 135 Query: 431 NVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITG 490 V+ V ++ + + + G P + E A SF T Sbjct: 136 FVYLIPAVMFFRVG----SVPAIVATFIFSVPPTIRLTNLGIRQVPTELIEAADSFGATP 191 Query: 491 WRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKG 550 + + LP P + G A + ++++ + G GLG + + Sbjct: 192 RQKLIKVQLPLALPTIMAGVNQCIMLALSMAVIAAMVGAG-------GLGRVVWSGIQTL 244 Query: 551 SFPEVVLGVLIMCCFVLALNRF 572 G L + + L+R Sbjct: 245 DVGLGFEGGLAVVILAIILDRI 266 >gi|163801350|ref|ZP_02195249.1| putative permease [Vibrio sp. AND4] gi|159174839|gb|EDP59639.1| putative permease [Vibrio sp. AND4] Length = 299 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 97/231 (41%), Gaps = 15/231 (6%) Query: 27 LVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVY 86 +++G+ L++ + + I + + + RT + +++++ Sbjct: 65 IILGVCTALVYAASRSWKLAVACFLSLILIGYFGMWEDTMRTLSIITVCTMLAIVLGIPI 124 Query: 87 ATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQ 146 A+S R+ V+ P+LD+MQ++P +L V+ GK+ G I+AI Sbjct: 125 GIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLG---IGKIPGLIAVVIYAIP--- 178 Query: 147 VWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFF 206 + + + +++ E + +F S Q+ + +P +MP ++ + ++ Sbjct: 179 --PVIRLTNLGIRLVDKEVLEAATAFGASAKQRLVGVQLPLAMPTIMAGINQTIMMALSM 236 Query: 207 VVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQ 257 VV + MI V G+G + +I Q L L ++ + L+D+ Sbjct: 237 VVIASMIGV-------KGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 Score = 78.0 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 11/232 (4%) Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + + I C A +W+ + T+ + V ++A + Sbjct: 60 STPWMIILGVCTALVYAASRSWKLAVACFLSLILIGYFGMWEDTMRTLSIITVCTMLAIV 119 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 + IP+GI + + S + P ++ PA V+ VV + + + ++ Sbjct: 120 LGIPIGIAMARSNRVQSVVTPLLDVMQTMPAFVYLIPVVMLLGIG----KIPGLIAVVIY 175 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 ++ G + E A++F + + + LP P + G A + Sbjct: 176 AIPPVIRLTNLGIRLVDKEVLEAATAFGASAKQRLVGVQLPLAMPTIMAGINQTIMMALS 235 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNR 571 +++ + GLG + +S F +L L + + +R Sbjct: 236 MVVIASMIG-------VKGLGQPVLKSITNQYFTLGLLNGLAIVALAILFDR 280 >gi|149913631|ref|ZP_01902164.1| glycine betaine/proline ABC transporter, permease protein [Roseobacter sp. AzwK-3b] gi|149812751|gb|EDM72580.1| glycine betaine/proline ABC transporter, permease protein [Roseobacter sp. AzwK-3b] Length = 656 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 83/526 (15%), Positives = 164/526 (31%), Gaps = 52/526 (9%) Query: 62 PQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVV 121 ++ T ++ A +S+L V T+A +S MVL P+L++ QS+P ++ VV Sbjct: 143 WEWTMETLSVIIVAAPLSILLGLVLGTMAWRSAGFRMVLNPLLNVAQSLPHFAYMIPVVV 202 Query: 122 YFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFW 181 + +G + AI I S V M L +P ++ E + WQ Sbjct: 203 FIG-------VGPKAGAIVTIIFS-VPPMIRMTLLGLQKVPPEVIEAGHMAGATRWQLLR 254 Query: 182 YLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAI 241 ++ +P + ++ + + VV + I + L ++ + Sbjct: 255 HVRLPTARTEILVGVNQVIMQCLAMVVLASFIGMPGLGQKL-------LQLLQALKIGRS 307 Query: 242 LYAMLTMLGVIFLYDQLLFRPMIVWSNKFRLERTTGIYPADSWV---LYLFRKTNFLRFI 298 + +T++ + + D+ W+ + + I SW+ L + Sbjct: 308 IEIGITIVLLAVMLDRCS----KAWATR----QPEHIEKGTSWLIRHRVLLVWAVLVGVF 359 Query: 299 GYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFW---------- 348 S F + + + L + I W Sbjct: 360 WGLSLIFPVLHEIGRRDAFSLADPLDAMMDWVIMVLDPVTQWLRWFLIVWVLIPLRDAML 419 Query: 349 ---FCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-----CITMFRVVVLIIIASII 400 F V + + W G + G IT++ V + +A++I Sbjct: 420 WLPFSAVLVFLMAVGWAVGGRRSALICLAYFGLIAMTGWWDRAMITVYTVTFAVFLATLI 479 Query: 401 WIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGT 460 P+GIW + + L FP+ ++ V+ + + L Sbjct: 480 GFPLGIWGSRTESRARAVLLICDTLQTFPSFIYLIPVIMLFGVNDVAVVGAVVLFAAVPL 539 Query: 461 QWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNA 520 Y I G P E A+ + + + LP P + G + + Sbjct: 540 IRY----TIEGLRNVPVAQIEAANMSGASRRQTLWSVRLPLALPTIMVGVNQSVMFSLFM 595 Query: 521 SIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 I++ + S++ G + L V M V Sbjct: 596 VIIAAFIGTQDLGQE----MQRALSSSDVGKGLVLGLAVAFMGLMV 637 Score = 56.9 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 21/198 (10%), Positives = 59/198 (29%), Gaps = 4/198 (2%) Query: 331 FLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRV 390 + + + + W+ + F + V+ T+ + Sbjct: 94 YGKNRWPRLGPIPWSVIAITAAMVGYYLSGWRLAMFAGLTFVWVAVMGQWEWTMETLSVI 153 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 +V ++ ++ + +G + P + + P + + V + + P Sbjct: 154 IVAAPLSILLGLVLGTMAWRSAGFRMVLNPLLNVAQSLPHFAYM---IPVVVFIGVGPKA 210 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 + +IF + ++ + G P + E T W+ R++ LP + G Sbjct: 211 GAIVTIIF-SVPPMIRMTLLGLQKVPPEVIEAGHMAGATRWQLLRHVRLPTARTEILVGV 269 Query: 511 ITACGGAWNASIVSEVAS 528 +++ Sbjct: 270 NQVIMQCLAMVVLASFIG 287 >gi|304393421|ref|ZP_07375349.1| taurine ABC transporter, permease protein [Ahrensia sp. R2A130] gi|303294428|gb|EFL88800.1| taurine ABC transporter, permease protein [Ahrensia sp. R2A130] Length = 443 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 4/143 (2%) Query: 386 TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYH 445 ++ RVV+ + + IP+G +G + P + + P PLV+ Sbjct: 252 SLIRVVIGFALGCLFGIPLGFAMGLNSWLRGWFDPIVEFMRPVPPLALIPLVIIWFGIGE 311 Query: 446 LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPY 505 L+ W + AG S A S T + +ILP P Sbjct: 312 QGK----ISLLFLAALWIMTIGARAGVSGVNISKVHAAYSLGATKPQILSKVILPNSLPE 367 Query: 506 YVTGAITACGGAWNASIVSEVAS 528 T A A G W + +E+ + Sbjct: 368 IFTAARVAMGVCWGTVVAAELVA 390 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 8/156 (5%) Query: 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFT 119 L + + +R++ + LF + L PI++ M+ +P L + Sbjct: 244 GLWENVMWSLIRVVIGFALGCLFGIPLGFAMGLNSWLRGWFDPIVEFMRPVPPLALIPLV 303 Query: 120 VVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQK 179 +++F GK I +F + +W MT + + + S + Q Sbjct: 304 IIWFGIGEQGK--------ISLLFLAALWIMTIGARAGVSGVNISKVHAAYSLGATKPQI 355 Query: 180 FWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVV 215 + +P S+P + ++M W VVA+E++ Sbjct: 356 LSKVILPNSLPEIFTAARVAMGVCWGTVVAAELVAA 391 >gi|162451030|ref|YP_001613397.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161161612|emb|CAN92917.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 307 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 324 RFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQ---------SIGYIVNHFTYQ 374 R + R L + + A WQ + +N Sbjct: 31 RGVPSPAPGRAPGEGRPRRDLRRAFLRALSVAACVGLWQWASMTRADLGVVTFLNVPAPT 90 Query: 375 DVLYVIWLGCIT----------MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQL 424 DVL + +FRV+ A + +G+ IG + P ++ Sbjct: 91 DVLAAARELFASQKLWQHLGNSVFRVLAGFAAAGATGVVLGLLIGRSRLAEDTLLPPLEI 150 Query: 425 LAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVAS 484 L P + PL + L+ + + G + IL I G A + Sbjct: 151 LRPIPGVAWLPLAILMFPSAELS----MIFITYMGALFPILIATIHGVGALDPRLIASSR 206 Query: 485 SFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIA 544 S R + ++LPG P VTG G +W + +E+ + G+G + Sbjct: 207 SLGARPLRLFLEVVLPGALPSIVTGMSIGMGTSWFCLVTAEMIGGQY------GIGYFTW 260 Query: 545 ESTEKGSFPEVV 556 ES +P++V Sbjct: 261 ESYNLQRYPDIV 272 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 14/219 (6%) Query: 43 TVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVP 102 P D++ L Q+ + R+L+ + V L +SR L+P Sbjct: 87 PAPTDVLAAARELFASQKLWQHLGNSVFRVLAGFAAAGATGVVLGLLIGRSRLAEDTLLP 146 Query: 103 ILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIP 162 L+I++ IP + +L ++ F AEL+ IF + ++ + + + + Sbjct: 147 PLEILRPIPGVAWLPLAILMF--------PSAELSMIFITYMGALFPILIATIHGVGALD 198 Query: 163 RDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPL 222 L SRS + F + +P ++P +V M + M WF +V +EMI Sbjct: 199 PRLIASSRSLGARPLRLFLEVVLPGALPSIVTGMSIGMGTSWFCLVTAEMIGG------Q 252 Query: 223 PGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFR 261 GIG + + Q I+ ML + + L L+ R Sbjct: 253 YGIGYFTWESYNLQRYPDIVLGMLLIGLLGMLSSALVLR 291 >gi|254253737|ref|ZP_04947054.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] gi|124898382|gb|EAY70225.1| ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Burkholderia dolosa AUO158] Length = 248 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 10/190 (5%) Query: 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLV 437 ++ ++ RV V + A ++ +P G IG + + P Q L + P+ Sbjct: 48 QLVMHVATSVKRVAVGLAWALVVGVPAGFAIGRLRWLEQMLSPAIQFLRMVSPLSWMPIA 107 Query: 438 VSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYI 497 V + + L+ F W +L N AG + + E+ S T +I Sbjct: 108 VMSLGVGDR----AVYFLLAFSAVWPLLMNTAAGVAQLDRRWIELGDSLAATRIEMIWHI 163 Query: 498 ILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVL 557 +PGI + +TG A G W + +E+ + GLG I ++ ++ ++ E+ Sbjct: 164 YVPGIAAHVLTGVRLAIGVLWIVLVPAEMLG------VSAGLGYLILDTRDRLAYSELTA 217 Query: 558 GVLIMCCFVL 567 +L++ Sbjct: 218 VILVIGALGF 227 Score = 95.4 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 84/236 (35%), Gaps = 17/236 (7%) Query: 21 DLLAFVLVIGIINILLHGIQETTV---PRDIVDIVPITLDVHSLPQYASRTTLRMLSAMV 77 LLA + + + L P+ + +P + L + + + R+ + Sbjct: 6 GLLAVIALWWLAVTLAGTRNPMVAQFAPQRTLAALPALVAQDQLVMHVATSVKRVAVGLA 65 Query: 78 ISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELA 137 +L+ + R L +L P + ++ + L ++ V+ + A Sbjct: 66 WALVVGVPAGFAIGRLRWLEQMLSPAIQFLRMVSPLSWMPIAVMSLGVG--------DRA 117 Query: 138 AIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMM 197 F + S VW + + + + R E+ S + + W++ VP ++ + Sbjct: 118 VYFLLAFSAVWPLLMNTAAGVAQLDRRWIELGDSLAATRIEMIWHIYVPGIAAHVLTGVR 177 Query: 198 MSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIF 253 +++ W +V +EM+ V G+G I + +L + + F Sbjct: 178 LAIGVLWIVLVPAEMLGVSA------GLGYLILDTRDRLAYSELTAVILVIGALGF 227 >gi|116051463|ref|YP_789704.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|296388040|ref|ZP_06877515.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|313108800|ref|ZP_07794786.1| putative aliphatic sulfonates transport permease protein [Pseudomonas aeruginosa 39016] gi|115586684|gb|ABJ12699.1| putative aliphatic sulfonates transport permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310881288|gb|EFQ39882.1| putative aliphatic sulfonates transport permease protein [Pseudomonas aeruginosa 39016] Length = 262 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 104/267 (38%), Gaps = 17/267 (6%) Query: 10 FISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 ++ R+ P L+ + + + P +++ L + Q+ + + Sbjct: 6 RLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISG 65 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R +I V + S+ L + +++++P L + +++F Sbjct: 66 WRAAIGFLIGGTIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGID--- 122 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 E A IF + ++ + + Y + I L E++RS+ LSG+ F + +P ++ Sbjct: 123 -----ESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGAL 177 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ + ++ W ++ +E I GIG A + ++ A+L Sbjct: 178 PSILVGVRFALGFMWLTLIVAETISASS------GIGYLAMNAREFLQTDVVVLAILLYA 231 Query: 250 GVIFLYD---QLLFRPMIVWSNKFRLE 273 + L D + L R + W ++++ Sbjct: 232 VLGKLADLAARGLERVWLRWHPAYQVK 258 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 83/240 (34%), Gaps = 17/240 (7%) Query: 338 QRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLG-------CITMFRV 390 +R++ V A+ W S + + + + I+ +R Sbjct: 9 ERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRA 68 Query: 391 VVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNL 450 + +I I + +G G + Q++ P PLV+ Sbjct: 69 AIGFLIGGTIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGI----DES 124 Query: 451 WLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGA 510 L+ GT + I N G E+A S+ ++G+ +R +ILPG P + G Sbjct: 125 AKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGV 184 Query: 511 ITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALN 570 A G W IV+E S ++G+G + E VVL +L+ + Sbjct: 185 RFALGFMWLTLIVAETIS------ASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLAD 238 >gi|295699467|ref|YP_003607360.1| choline ABC transporter permease [Burkholderia sp. CCGE1002] gi|295438680|gb|ADG17849.1| choline ABC transporter, permease protein [Burkholderia sp. CCGE1002] Length = 300 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 89/191 (46%), Gaps = 15/191 (7%) Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 T LS+ VISL+ AKSR + M++ P+LD+MQ++P +L + F Sbjct: 91 TLGLTLSSTVISLVLGVPLGIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGL-- 148 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 G+V G IFA+ + + ++ ++ E ++F + WQ + + P Sbjct: 149 -GRVPGILSTVIFAMPPA-----VRLTALGIKHVNHEIVEAGQAFGCTPWQLLYKVQFPN 202 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P ++ + ++ V+ + M+ G G+G+ + +I+ D+ + ++ Sbjct: 203 ALPSIMTGVNQTIMMALSMVIIASMVGAG-------GLGNDVLASIQRLDIGLGFESGMS 255 Query: 248 MLGVIFLYDQL 258 ++ + + D++ Sbjct: 256 VVMLAIILDRI 266 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 75/228 (32%), Gaps = 14/228 (6%) Query: 348 WFCVVCGVAIGI---AWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPV 404 W + V IG+ W+ + + IT+ + +I+ ++ +P+ Sbjct: 50 WALMAFFVGIGLWRVGWRFALFTLAALLLIYGTGFWDQMVITLGLTLSSTVISLVLGVPL 109 Query: 405 GIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYI 464 GIW+ + ++P L+ PA V+ + L + + Sbjct: 110 GIWMAKSRTVEMIVRPVLDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRL- 168 Query: 465 LFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVS 524 G ++ E +F T W+ + P P +TG A + I++ Sbjct: 169 ---TALGIKHVNHEIVEAGQAFGCTPWQLLYKVQFPNALPSIMTGVNQTIMMALSMVIIA 225 Query: 525 EVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 + G GLG + S ++ + + + L+R Sbjct: 226 SMVGAG-------GLGNDVLASIQRLDIGLGFESGMSVVMLAIILDRI 266 >gi|269795239|ref|YP_003314694.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Sanguibacter keddieii DSM 10542] gi|269097424|gb|ACZ21860.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Sanguibacter keddieii DSM 10542] Length = 293 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 12/260 (4%) Query: 316 LCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV--CGVAIGIAWQSIGYIVNHFTY 373 R P + ++ + ++ W V V Sbjct: 32 APRGSARRPATGPGRWRRVAVGAILPLLVLAAWTWVTETGRVPAYRLPSPESVWSAAVDL 91 Query: 374 QDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVF 433 + I+ RV++ I ++I + +G +G + P L A P+ + Sbjct: 92 AQRGLLGQYVAISTQRVLIGFAIGAVIGLLLGAVVGLSHWARGLLAPSFDGLRAVPSLAW 151 Query: 434 FPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRW 493 PL+V V + +L+ G + + V E ++ ++G R Sbjct: 152 VPLLVLWVGINEDSK----IILIAIGAFFPVYTTVAGALRHVDPHLVEAGRAYGLSGPRL 207 Query: 494 WRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFP 553 + LP + P + G A +W + +E+ + + GLG + +S + G Sbjct: 208 LAQVQLPAVVPSVLAGLRLALAQSWLFLVAAELLN------SSMGLGFLLVDSGQNGRVD 261 Query: 554 EVVLGVLIMCCFVLALNRFL 573 ++L ++++ N + Sbjct: 262 RMILSIVLLALLGGLTNALV 281 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 103/252 (40%), Gaps = 23/252 (9%) Query: 17 PNIFDLLAFVLVIGIINILLHGIQ---------ETTVPRDIVDIVPITLDVHSLPQYASR 67 P + +A ++ ++ + P + L QY + Sbjct: 44 PGRWRRVAVGAILPLLVLAAWTWVTETGRVPAYRLPSPESVWSAAVDLAQRGLLGQYVAI 103 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 +T R+L I + + + S +L P D ++++P L ++ V++ Sbjct: 104 STQRVLIGFAIGAVIGLLLGAVVGLSHWARGLLAPSFDGLRAVPSLAWVPLLVLWVGINE 163 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 K+I + A F ++T+ + +L ++ L E R++ LSG + + +P Sbjct: 164 DSKIILIAIGAFFPVYTT--------VAGALRHVDPHLVEAGRAYGLSGPRLLAQVQLPA 215 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 +P ++ + ++++ W F+VA+E++ G+G + + + + ++ +++ Sbjct: 216 VVPSVLAGLRLALAQSWLFLVAAELL------NSSMGLGFLLVDSGQNGRVDRMILSIVL 269 Query: 248 MLGVIFLYDQLL 259 + + L + L+ Sbjct: 270 LALLGGLTNALV 281 >gi|294632073|ref|ZP_06710633.1| ABC transporter, permease [Streptomyces sp. e14] gi|292835406|gb|EFF93755.1| ABC transporter, permease [Streptomyces sp. e14] Length = 302 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 89/231 (38%), Gaps = 10/231 (4%) Query: 41 ETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVL 100 + P D+ +L Y + R L + +L L A+ + + + Sbjct: 76 KLPSPSDVGAEFKDAWLQGTLLDYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAI 135 Query: 101 VPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCN 160 P+L +QS+P + ++ V++ I V ++ + + Sbjct: 136 GPVLSGLQSLPSVAWVPPAVIWLGLDNSMMYA--------VILLGAVPSIANGLVSGIDQ 187 Query: 161 IPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVI 220 +P R+ +G + W++ +P ++PG + + + W ++A+E+I + Sbjct: 188 VPPLYLRAGRTMGATGLKGAWHIVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLG 247 Query: 221 PLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLFRPMIVWSNKFR 271 G+G+ + + + A++ +L V D L+F P+ W + R Sbjct: 248 I--GLGALLENGRNASSMSMVFEAIILILFVGIAIDLLIFSPLERWVLRSR 296 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 82/207 (39%), Gaps = 6/207 (2%) Query: 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPL 436 ++ ++ R ++ + A I P+G+ + + + I P L + P+ + P Sbjct: 94 GTLLDYIWTSVSRGLLGFLFALAIGTPLGLLVARVKFVRAAIGPVLSGLQSLPSVAWVPP 153 Query: 437 VVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRY 496 V + N + +++ G I +++G P + + TG + + Sbjct: 154 AVIWLGL----DNSMMYAVILLGAVPSIANGLVSGIDQVPPLYLRAGRTMGATGLKGAWH 209 Query: 497 IILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVV 556 I+LP P Y+ G +W + + +E+ + GLGA + S V Sbjct: 210 IVLPAALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGI--GLGALLENGRNASSMSMVF 267 Query: 557 LGVLIMCCFVLALNRFLWHPLYLYGTR 583 ++++ +A++ ++ PL + R Sbjct: 268 EAIILILFVGIAIDLLIFSPLERWVLR 294 >gi|319441416|ref|ZP_07990572.1| putative ABC transporter permease protein [Corynebacterium variabile DSM 44702] Length = 311 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R VV IA + + +G+ IG+ ++ + P ++L A P+V + Sbjct: 121 GASLTRSVVGFGIAVVAGVTLGLLIGWYRFLADLLNPVLEILRNTAALALLPVVTLLLGI 180 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+++ + IL N + G A S ++ + + ++LP Sbjct: 181 GET----AKISLVVYAALFPILLNTLTGVRTVDPLLVRSARSLNLRPHQIFIRVVLPSAL 236 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TG + + +E+ +GLG I S + +G++ + Sbjct: 237 PSIFTGLRMGAAASILVLVAAEMIG------AKSGLGYLIQASQLNFQIANMYVGIIAIA 290 Query: 564 CFVLALNRFLW---HPLYLY 580 L N L L + Sbjct: 291 ALGLLANYGLLAVQRRLSKW 310 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 17/224 (7%) Query: 46 RDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILD 105 +++D +L + + R + I+++ L R L +L P+L+ Sbjct: 101 SEVLDAAWRLTTDGTLGHHVGASLTRSVVGFGIAVVAGVTLGLLIGWYRFLADLLNPVLE 160 Query: 106 IMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDL 165 I+++ L L + E A I + + ++ + + + + L Sbjct: 161 ILRNTAALALLPVVTLLLGIG--------ETAKISLVVYAALFPILLNTLTGVRTVDPLL 212 Query: 166 EEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGI 225 +RS L Q F + +P ++P + + M + +VA+EMI G+ Sbjct: 213 VRSARSLNLRPHQIFIRVVLPSALPSIFTGLRMGAAASILVLVAAEMIGAKS------GL 266 Query: 226 GSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLLF---RPMIVW 266 G I + + + ++ + + L + L R + W Sbjct: 267 GYLIQASQLNFQIANMYVGIIAIAALGLLANYGLLAVQRRLSKW 310 >gi|300786191|ref|YP_003766482.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Amycolatopsis mediterranei U32] gi|299795705|gb|ADJ46080.1| permease component of ABC-type nitrate/sulfonate/bicarbonate transport system [Amycolatopsis mediterranei U32] Length = 280 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 10/187 (5%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R +A + +P+G+ IG+ ++ +QP +L A P+ + Sbjct: 85 LASVGRSAAGFAVAVAVAVPLGLLIGWYRPVARFLQPLLELARNTAALALLPVFTLLLGI 144 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 L+ L+++ W +L N IAG + + A S ++ R +R +ILP Sbjct: 145 GELSK----VSLVVYACVWPVLLNTIAGVNTVDPLLVKAARSLGLSSPRLFRKVILPSAV 200 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P TG A + + +E+ GLG I S ++ G+L + Sbjct: 201 PTVFTGIRMAASYSILVLVAAEMVG------AKAGLGYLINTSQVNFQIQQMYAGILAVS 254 Query: 564 CFVLALN 570 + +N Sbjct: 255 VLGVLVN 261 Score = 98.8 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 78/214 (36%), Gaps = 17/214 (7%) Query: 59 HSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTF 118 L + + R + +++ L R + L P+L++ ++ L L Sbjct: 78 GELADHLLASVGRSAAGFAVAVAVAVPLGLLIGWYRPVARFLQPLLELARNTAALALLPV 137 Query: 119 TVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQ 178 + EL+ + + + VW + + + + L + +RS LS + Sbjct: 138 FTLLLGIG--------ELSKVSLVVYACVWPVLLNTIAGVNTVDPLLVKAARSLGLSSPR 189 Query: 179 KFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDL 238 F + +P ++P + + M+ S +VA+EM+ G+G I + + Sbjct: 190 LFRKVILPSAVPTVFTGIRMAASYSILVLVAAEMVGAKA------GLGYLINTSQVNFQI 243 Query: 239 LAILYAMLTMLGVIFLYD---QLLFRPMIVWSNK 269 + +L + + L + L R W K Sbjct: 244 QQMYAGILAVSVLGVLVNSGFVALERRFSTWRPK 277 >gi|254513483|ref|ZP_05125548.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit [Rhodobacteraceae bacterium KLH11] gi|221532487|gb|EEE35483.1| ABC Glycine betaine/L-proline transporter, inner membrane subunit [Rhodobacteraceae bacterium KLH11] Length = 324 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 15/194 (7%) Query: 65 ASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFM 124 A T ++SA+++S + L K+ R + PILD MQ+IP +L V+ Sbjct: 101 AMTTLAIVVSAVIMSFIIGLPLGILVGKNDRFESAIRPILDTMQTIPAFVYLVPVVMLIG 160 Query: 125 NLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLG 184 G V G + IFA + + + + + E +R+F + Q + + Sbjct: 161 ---IGNVSGVVVTVIFA-----LPPLIRLTSLGIRGVNPSVVEAARAFGANPRQVLFKVE 212 Query: 185 VPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYA 244 +P + P ++ + ++ VV + MI V G+G+ + A+ D L Sbjct: 213 LPLATPTILAGVNQTIMLSLSMVVIASMISV-------KGLGNEVLRAMGRLDAGKALVG 265 Query: 245 MLTMLGVIFLYDQL 258 L ++ + + D++ Sbjct: 266 GLGIVILAIVLDRI 279 Score = 83.8 bits (206), Expect = 7e-14, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 11/192 (5%) Query: 381 WLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSC 440 L T+ VV +I++ II +P+GI +G S I+P + PA V+ VV Sbjct: 99 GLAMTTLAIVVSAVIMSFIIGLPLGILVGKNDRFESAIRPILDTMQTIPAFVYLVPVVML 158 Query: 441 VSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILP 500 + +++ + + ++ G E A +F + + LP Sbjct: 159 IGIGNVSGVVVTVIF----ALPPLIRLTSLGIRGVNPSVVEAARAFGANPRQVLFKVELP 214 Query: 501 GIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVL 560 P + G + + +++ + S GLG + + + + ++G L Sbjct: 215 LATPTILAGVNQTIMLSLSMVVIASMIS-------VKGLGNEVLRAMGRLDAGKALVGGL 267 Query: 561 IMCCFVLALNRF 572 + + L+R Sbjct: 268 GIVILAIVLDRI 279 >gi|7542432|gb|AAF63444.1|AF218267_1 glycine betaine/L-proline transport system permease protein [Pseudomonas putida] Length = 315 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 15/203 (7%) Query: 56 LDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGF 115 L + + + T +L+++ L L A+S R+ ++ P+LD MQ++P + Sbjct: 87 LGLIGVWAESMTTLALVLTSVFFCALIGIPLGILCARSDRMERIIRPLLDAMQTLPAFVY 146 Query: 116 LTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLS 175 L V+ F G V G + +FA + + + +P D E +R+F + Sbjct: 147 LVPVVMLFG---IGNVPGVLVTIVFA-----LPPLVRLTNLGIRQVPEDKIEAARAFGCT 198 Query: 176 GWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKE 235 Q + +P + ++ + ++ VV + MI VG G+G + I Sbjct: 199 PRQMLTRVQLPLATSTIMAGLNQTLMLSLSMVVIASMISVG-------GLGQMVLRGIGR 251 Query: 236 QDLLAILYAMLTMLGVIFLYDQL 258 D+ + ++ + D+L Sbjct: 252 LDMGLATVGGVGLVLLAIFLDRL 274 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 86/280 (30%), Gaps = 12/280 (4%) Query: 293 NFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQRVSYMLDIFWFCVV 352 F + L+ V IR+ + + + + Sbjct: 7 PFQAATIPLGDWVTATLNFLVHNFREVFRAIRWPIDQVLNGIEFTLQSIPPTIGIILSSL 66 Query: 353 CGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP 412 G + ++ T ++ V T+ V+ + ++I IP+GI Sbjct: 67 LGWQLAGKRMAL-LCFVTLTLLGLIGVWAESMTTLALVLTSVFFCALIGIPLGILCARSD 125 Query: 413 HISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGA 472 + I+P + PA V+ VV N+ L+ I ++ G Sbjct: 126 RMERIIRPLLDAMQTLPAFVYLVPVVMLFGIG----NVPGVLVTIVFALPPLVRLTNLGI 181 Query: 473 SAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHI 532 P D E A +F T + + LP + G + + +++ + S G Sbjct: 182 RQVPEDKIEAARAFGCTPRQMLTRVQLPLATSTIMAGLNQTLMLSLSMVVIASMISVG-- 239 Query: 533 HLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 GLG + + +G + + + L+R Sbjct: 240 -----GLGQMVLRGIGRLDMGLATVGGVGLVLLAIFLDRL 274 >gi|226364422|ref|YP_002782204.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226242911|dbj|BAH53259.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 295 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 14/257 (5%) Query: 328 PENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWL-GCIT 386 P + L + + L ++ G+ + ++ F +W + Sbjct: 47 PLAWRILKPSIAIVAFLALWEIAPRVGLVDEVFLPPFSTVIEAFFDLVQSGELWQHVSAS 106 Query: 387 MFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL 446 + R ++ +A +I IP+GI I + +S + P +L A P+ + + Sbjct: 107 LSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIGEE 166 Query: 447 NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYY 506 + L+I+ + IL N I+G + ASS ++ R ++ ++LP P Sbjct: 167 SK----IALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVPTI 222 Query: 507 VTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFV 566 TG A + I +E+ GLG I S P + G++ + Sbjct: 223 FTGIRMAAASSILVLIAAEMVG------AKAGLGYLITASQFNFQIPNMYAGIVAISVLG 276 Query: 567 LALN---RFLWHPLYLY 580 L+LN + L + Sbjct: 277 LSLNAVLVLIERRLSRW 293 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 95/262 (36%), Gaps = 18/262 (6%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQETTVPRDIVDIVPITL-DVHSLPQYASR 67 ++ RI ++AF+ + I + + P V L L Q+ S Sbjct: 46 GPLAWRILKPSIAIVAFLALWEIAPRVGLVDEVFLPPFSTVIEAFFDLVQSGELWQHVSA 105 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R L ++++ A R + L PIL++ ++ L L ++ Sbjct: 106 SLSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIG- 164 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 E + I + + + + + + + L + + S LS + F + +P Sbjct: 165 -------EESKIALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPA 217 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++P + + M+ + ++A+EM+ G+G I + + + ++ Sbjct: 218 AVPTIFTGIRMAAASSILVLIAAEMVGAKA------GLGYLITASQFNFQIPNMYAGIVA 271 Query: 248 MLGVIFLYD---QLLFRPMIVW 266 + + + L+ R + W Sbjct: 272 ISVLGLSLNAVLVLIERRLSRW 293 >gi|237510087|ref|ZP_04522802.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|235002292|gb|EEP51716.1| taurine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] Length = 253 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 61 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 121 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 177 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 230 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 231 AIALALEIGLRALQRRLTPW 250 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 50 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 109 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 110 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 161 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 162 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 215 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 216 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 250 >gi|76817512|ref|YP_335779.1| permease component of taurine ABC transporter [Burkholderia pseudomallei 1710b] gi|76581985|gb|ABA51459.1| permease component of taurine ABC transporter [Burkholderia pseudomallei 1710b] Length = 253 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 384 CITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSY 443 ++ R+ +A + IPVGI + + + P + P + PL+V Sbjct: 61 LASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGI 120 Query: 444 YHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIF 503 + LL+ + AGAS A+S T + R+++LP Sbjct: 121 GDASK----ILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSAL 176 Query: 504 PYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMC 563 P +TG A G W+ + +E+ + T GLG + ++ V+ G+L++ Sbjct: 177 PDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASRFLVTDVVIAGILVIG 230 Query: 564 CFVLALN---RFLWHPLYLY 580 LAL R L L + Sbjct: 231 AIALALEIGLRALQRRLTPW 250 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 88/215 (40%), Gaps = 17/215 (7%) Query: 55 TLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILG 114 D +L ++ + R+ +A ++++ L A +R + V+ PI++ + IP L Sbjct: 50 GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLA 109 Query: 115 FLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRL 174 +L VV+F + + I I+ + + + + + S Sbjct: 110 YLPLMVVWFGIG--------DASKILLIYLTMFAPLAIATAAGASGVSESRLRAAASLGA 161 Query: 175 SGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK 234 + Q ++ +P ++P ++ + +++ GW +VA+E+I G+G + A + Sbjct: 162 TRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIA------ATRGLGFMVYSASR 215 Query: 235 EQDLLAILYAMLTMLGVIFLYD---QLLFRPMIVW 266 ++ +L + + + + L R + W Sbjct: 216 FLVTDVVIAGILVIGAIALALEIGLRALQRRLTPW 250 >gi|187779097|ref|ZP_02995570.1| hypothetical protein CLOSPO_02692 [Clostridium sporogenes ATCC 15579] gi|187772722|gb|EDU36524.1| hypothetical protein CLOSPO_02692 [Clostridium sporogenes ATCC 15579] Length = 254 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 10/192 (5%) Query: 379 VIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 +I I+ RV I + IP+GI G I + L P PL++ Sbjct: 51 LIKHIAISTLRVFEGFFITICLAIPLGILFGVNKSIYDYFKNLLGFLRHTPPLALVPLLI 110 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + ++++ + + +L N I+G + EV +F+++ ++ II Sbjct: 111 LWFGIGEKSK----IIIIVLASFFPVLLNTISGVESCSKKLIEVGQTFNLSKINIFKKII 166 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +P P + G G +W A I +E+ + ++GLG I + + V++G Sbjct: 167 IPWALPNILVGMRLGIGYSWRAIIGAEMVA------ASSGLGYLILDGQQLSRSAVVIVG 220 Query: 559 VLIMCCFVLALN 570 +L + + Sbjct: 221 ILSIGILGTVCD 232 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 89/218 (40%), Gaps = 14/218 (6%) Query: 42 TTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLV 101 P++++ + + +L ++ + +TLR+ I++ L ++ + Sbjct: 32 LPTPKEVIVSLGELIKSGALIKHIAISTLRVFEGFFITICLAIPLGILFGVNKSIYDYFK 91 Query: 102 PILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNI 161 +L ++ P L + +++F E + I I + + + + + + Sbjct: 92 NLLGFLRHTPPLALVPLLILWFGIG--------EKSKIIIIVLASFFPVLLNTISGVESC 143 Query: 162 PRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIP 221 + L EV ++F LS F + +P+++P ++ M + + W ++ +EM+ Sbjct: 144 SKKLIEVGQTFNLSKINIFKKIIIPWALPNILVGMRLGIGYSWRAIIGAEMVAASS---- 199 Query: 222 LPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQLL 259 G+G I + ++ +L++ + + D + Sbjct: 200 --GLGYLILDGQQLSRSAVVIVGILSIGILGTVCDWVF 235 >gi|117164559|emb|CAJ88105.1| putative transport system integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 311 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 97/258 (37%), Gaps = 11/258 (4%) Query: 9 PFISRRIFPNIFDLLAFVLVIGIINILLHGIQ-ETTVPRDIVDIVPITLDVHSLPQYASR 67 + ++ P I + +++ ++ + P + D V +L Y Sbjct: 52 ATLVHKVLPPISAIALVLVIWQLLVWAEIAPDYKLPSPSAVWDEVADAWRQGTLLDYIWT 111 Query: 68 TTLRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 + R L +++L L A+ + + + PIL +QS+P + ++ V++ Sbjct: 112 SVSRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPILSGLQSLPSVAWVPPAVLWLGLNN 171 Query: 128 PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPF 187 I V ++ + + IP R+ +G + W++ +P Sbjct: 172 SMMYA--------VILLGAVPSIANGLVAGIDQIPPLFLRAGRTLGATGLRGAWHIVMPG 223 Query: 188 SMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLT 247 ++PG + + + W ++A+E+I + G+G + + + A+ Sbjct: 224 ALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV--GLGQLLENGRNNASISQVFLAIFL 281 Query: 248 MLGVIFLYDQLLFRPMIV 265 +L V D L+F P+ Sbjct: 282 ILLVGIAIDLLIFSPLER 299 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 98/261 (37%), Gaps = 14/261 (5%) Query: 327 FPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFT--YQDVLYVIWLGC 384 L+ +V + +V + A + Y + + + +V G Sbjct: 45 VDRPPLRATLVHKVLPPISAIALVLVIWQLLVWAEIAPDYKLPSPSAVWDEVADAWRQGT 104 Query: 385 I------TMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVV 438 + ++ R ++ ++A I P+G+ + + + + P L + P+ + P V Sbjct: 105 LLDYIWTSVSRGLLGFLMALAIGTPLGLLVARVKFVRAAVGPILSGLQSLPSVAWVPPAV 164 Query: 439 SCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYII 498 + N + +++ G I ++AG P F + TG R +I+ Sbjct: 165 LWLGL----NNSMMYAVILLGAVPSIANGLVAGIDQIPPLFLRAGRTLGATGLRGAWHIV 220 Query: 499 LPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLG 558 +PG P Y+ G +W + + +E+ + GLG + S +V L Sbjct: 221 MPGALPGYLAGLKQGWAFSWRSLMAAEIIASSPDLGV--GLGQLLENGRNNASISQVFLA 278 Query: 559 VLIMCCFVLALNRFLWHPLYL 579 + ++ +A++ ++ PL Sbjct: 279 IFLILLVGIAIDLLIFSPLER 299 >gi|257468126|ref|ZP_05632222.1| putative aliphatic sulfonate ABC transporter,permease protein [Fusobacterium ulcerans ATCC 49185] Length = 253 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 85/210 (40%), Gaps = 10/210 (4%) Query: 375 DVLYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + +I I++ R+ + I + +P+GI+ G +I + + + P Sbjct: 48 ENGKLIRHIGISLRRIFIGFSITVFLAVPLGIFFGAFTNIYAYFKSIFEFFRHTPPLALI 107 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 P+++ + ++++ + + + NV+ G + EV F ++ + Sbjct: 108 PMIILWFGIGETSK----IVIIVLASFFPVFLNVLKGVEGCDKKYIEVGKVFDMSQKDIF 163 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 IILP P + G G +W A I +E+ + ++G+G I ++ + Sbjct: 164 LKIILPNSVPDILIGLKLGIGYSWRAIIGAELIA------ASSGIGYLILDAQQISRSDI 217 Query: 555 VVLGVLIMCCFVLALNRFLWHPLYLYGTRC 584 V+LG++++ + + + Y R Sbjct: 218 VMLGIIVIGTLGIITDNIFSKAVSAYIKRK 247 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 96/267 (35%), Gaps = 15/267 (5%) Query: 11 ISRRIFPNIFDLLAFVLVIGIINIL-LHGIQETTVPRDIVDIVPITLDVHSLPQYASRTT 69 + R ++ + ++V + + L P IV ++ L ++ + Sbjct: 1 MKREKLKGMYLIAVILIVWTVGSHYNLWNSYIIPAPSKIVTSFVKLVENGKLIRHIGISL 60 Query: 70 LRMLSAMVISLLFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPG 129 R+ I++ + I + + P L + +++F Sbjct: 61 RRIFIGFSITVFLAVPLGIFFGAFTNIYAYFKSIFEFFRHTPPLALIPMIILWFGIGETS 120 Query: 130 KVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSM 189 K++ LA+ F +F ++ + + + EV + F +S F + +P S+ Sbjct: 121 KIVIIVLASFFPVF--------LNVLKGVEGCDKKYIEVGKVFDMSQKDIFLKIILPNSV 172 Query: 190 PGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTML 249 P ++ + + + W ++ +E+I GIG I A + ++ ++ + Sbjct: 173 PDILIGLKLGIGYSWRAIIGAELIAASS------GIGYLILDAQQISRSDIVMLGIIVIG 226 Query: 250 GVIFLYDQLLFRPMIVWSNKFRLERTT 276 + + D + + + + + + + Sbjct: 227 TLGIITDNIFSKAVSAYIKRKQGDYVE 253 >gi|330013350|ref|ZP_08307621.1| glycine betaine/L-proline transport system permease protein ProW [Klebsiella sp. MS 92-3] gi|328533538|gb|EGF60261.1| glycine betaine/L-proline transport system permease protein ProW [Klebsiella sp. MS 92-3] Length = 355 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVP-ITLDVHSLPQYASRTTLRMLSAMVISL 80 LL + II L Q +++ + +V I + A T +L+A++ + Sbjct: 102 LLGMPAPVAIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCM 161 Query: 81 LFTFVYATLAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIF 140 + A+S R ++ P+LD MQ+ P +L V+ F G V G + IF Sbjct: 162 VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFG---IGNVPGVVVTIIF 218 Query: 141 AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSM 200 A + + + +P DL E SRSF S Q + + +P +MP ++ + ++ Sbjct: 219 A-----LPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTL 273 Query: 201 SGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTMLGVIFLYDQL 258 VV + MI VG G+G + I D+ + ++ + + D+L Sbjct: 274 MLALSMVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324 Score = 89.2 bits (220), Expect = 2e-15, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 99/293 (33%), Gaps = 32/293 (10%) Query: 280 PADSWVLYLFRKTNFLRFIGYSSWNFFSPLSNNVKKLCRTLGVIRFHFPENFLQLCSNQR 339 P DSWV T+ + +I F + + + + P Sbjct: 64 PLDSWV------THAIDWIVLHFRPLFQGIRVPIDYILSAFQQLLLGMPAPV-------- 109 Query: 340 VSYMLDIFWFCVVCGVAIGIAWQSIGYIVNHFTYQDVLYVIWLGCITMFRVVVLIIIASI 399 + +F ++G+ ++ ++ + + V+ ++ + Sbjct: 110 ---AIIVFALIAWQISSLGMGVATLVSLIAIGAIGAWSQAMVTLAL----VLTALLFCMV 162 Query: 400 IWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLMIFG 459 I +P+GIW+ P + I+P + PA V+ +V N+ ++ I Sbjct: 163 IGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIG----NVPGVVVTIIF 218 Query: 460 TQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWN 519 I+ I G + P D E + SF + + + LP P + G A + Sbjct: 219 ALPPIVRLTILGINQVPADLIEASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALS 278 Query: 520 ASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRF 572 +++ + + G GLG + + +G + + + L+R Sbjct: 279 MVVIASMIAVG-------GLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 324 >gi|194432572|ref|ZP_03064858.1| taurine uptake ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194419133|gb|EDX35216.1| taurine uptake ABC transporter, permease protein [Shigella dysenteriae 1012] gi|332085640|gb|EGI90804.1| taurine transport system permease protein tauC [Shigella dysenteriae 155-74] Length = 275 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 321 GVIRFHFPENFLQLCSNQRVSYMLDIFWFCVVCGVAIGIAW----QSIGYIVNHFTYQDV 376 +++ +P + S ++ +L ++W + + Q + ++ Q Sbjct: 12 RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPMFLPPPQQVLAKLLTIAGPQGF 71 Query: 377 LYVIWL--GCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFF 434 + ++ R+V+ ++ A +I IPVGI +G P + + P +L P + Sbjct: 72 MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131 Query: 435 PLVVSCVSYYHLNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWW 494 PL+V + LL+ + + +AG + A S + + Sbjct: 132 PLMVIWFGIGETSK----ILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVL 187 Query: 495 RYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRTTGLGAYIAESTEKGSFPE 554 ++ILPG P +TG G W+ + +E+ + T GLG + + E + Sbjct: 188 WFVILPGALPEILTGLRIGLGVGWSTLVAAELIA------ATRGLGFMVQSAGEFLAADV 241 Query: 555 VVLGVLIMCCFVLALN---RFLWHPLYLY 580 V+ G+ ++ L R L L + Sbjct: 242 VLAGIAVIAIIAFLLELGLRALQRRLTPW 270 Score = 103 bits (257), Expect = 9e-20, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 22 LLAFVLVIGIINILLHGIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLL 81 + V + +I+ + + + + + P +L Q+ + + R++ A++ +++ Sbjct: 37 VWWTVA