HHsearch alignment for GI: 255764498 and conserved domain: PRK00236

>PRK00236 xerC site-specific tyrosine recombinase XerC; Reviewed.
Probab=100.00  E-value=0  Score=432.19  Aligned_cols=278  Identities=40%  Similarity=0.607  Sum_probs=254.6

Q ss_pred             CHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             6466413899999999999999999754499-868899999999999999779984353221011233432100012222
Q gi|255764498|r    2 MSSERASSINTLSAYKRDLKEMQNFLNNKEI-SLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRK   80 (300)
Q Consensus         2 l~~~R~~S~~T~~~Y~~~l~~f~~~~~~~~~-~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~   80 (300)
T Consensus        17 l~~~r~lS~~Ti~~Y~~~l~~f~~~~~~~~~~~l~~i~~~~i~~~~~~l~~~g~s~~Ti~~~l~~lr~~~~~a~~~~~i~   96 (295)
T PRK00236         17 LRVERGLSPHTLRAYRRDLRAFLAFLEEVGLADLQQLDLADLRAFLARLRRQGLSARSLARRLSALRSFYRWLVRRGLLK   96 (295)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99885907999999999999999999875999947699999999999998769999999999999999999887628614


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHC
Q ss_conf             22122221212221112233202469999864320012561027765431100012210013433343200000111100
Q gi|255764498|r   81 DNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERT  160 (300)
Q Consensus        81 ~np~~~i~~~k~~~~~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~  160 (300)
T Consensus        97 ~nP~~~i~~~k~~~~~~~~lt~~e~~~ll~~~~~--------~~~~~Rd~~i~~ll~~tGlR~~E~~~L~~~did~~~~~  168 (295)
T PRK00236         97 ANPAAGLRAPKAPKRLPKPLDVDQAKRLLDADAD--------DPLALRDRAILELLYGSGLRLSELVGLDIDDLDLASGT  168 (295)
T ss_pred             CCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCE
T ss_conf             5778751277766568850018999999971325--------80658999999999981978331205639772777898


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHH
Q ss_conf             01112221111100001247887532321001246777520012333222221111111012344201466764259885
Q gi|255764498|r  161 MIIQGKGNKERLVILSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHII  240 (300)
Q Consensus       161 i~v~~K~~k~R~ipi~~~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~l  240 (300)
T Consensus       169 i~i~~Kg~K~R~Vpl~~~~~~~L~~yl~~~~~---~~~~~~lF~~~-~g~~l~~~~i~~~~~~~~~~~gi~~-~~~~H~l  243 (295)
T PRK00236        169 VRVLGKGNKERTVPVGSAALEALEAYLARPLA---EEDDDALFLGA-RGGRLSPRVVQRRVKKLRKKAGLPE-HITPHKL  243 (295)
T ss_pred             EEEECCCCEEEEEECCHHHHHHHHHHHHHCCC---CCCCCEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCC-CCCCCCC
T ss_conf             98817898168986599999999999996776---78998377568-9995878899999999999859999-9989978


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHH
Q ss_conf             8899999998588888999985589989989996459999999999828011
Q gi|255764498|r  241 RHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLA  292 (300)
Q Consensus       241 Rht~at~l~~~G~~~~~v~~~lGH~s~~tT~~Y~~~~~~~~~~~~~~~~p~~  292 (300)
T Consensus       244 RHt~At~l~~~G~~l~~vq~~LGHssi~tT~~Y~h~~~~~l~~~~~~~~p~~  295 (295)
T PRK00236        244 RHSFATHLLESGGDLRAVQELLGHASLSTTQIYTHVDFQHLAEVYDAAHPRA  295 (295)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf             8999999998799999999881899889999988689999999999878399