HHsearch alignment for GI: 255764498 and conserved domain: PRK00283

>PRK00283 xerD site-specific tyrosine recombinase XerD; Reviewed.
Probab=100.00  E-value=0  Score=442.04  Aligned_cols=283  Identities=43%  Similarity=0.670  Sum_probs=261.2

Q ss_pred             CHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             64664138999999999999999997544998688999999999999997799843532210112334321000122222
Q gi|255764498|r    2 MSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRKD   81 (300)
Q Consensus         2 l~~~R~~S~~T~~~Y~~~l~~f~~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~~   81 (300)
T Consensus        13 L~~erg~S~~Ti~~Y~~~l~~f~~~l~~~~~~~~~it~~~i~~y~~~L~~~~~s~~Tin~~l~~lr~~~~~a~~~~~i~~   92 (296)
T PRK00283         13 LWVERGLAENTLSSYRRDLELFAEWLAARGLSLAEATRDDLQAFLAELAEGGYKATSSARRLSALRRFFQFLLREGLRED   92 (296)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99987907999999999999999999875999477999999999999987799999999999999974799987074334


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             21222212122211122332024699998643200125610277654311000122100134333432000001111000
Q gi|255764498|r   82 NPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTM  161 (300)
Q Consensus        82 np~~~i~~~k~~~~~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i  161 (300)
T Consensus        93 np~~~i~~~k~~~~~~~~lt~eei~~ll~~~~~-------~~~~~~Rd~ail~ll~~tGlR~~El~~L~~~di~~~~~~i  165 (296)
T PRK00283         93 DPTALLDSPKLPRRLPKTLSEAQVEALLDAPDI-------DTPLGLRDRAMLELLYATGLRVSELVGLTLDDVSLRQGVV  165 (296)
T ss_pred             CHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC-------CCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCE
T ss_conf             878636677888889741437899998732377-------8657689999999999838761202178599923577955


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHH
Q ss_conf             111222111110000124788753232100124-6777520012333222221111111012344201466764259885
Q gi|255764498|r  162 IIQGKGNKERLVILSPSALHALQMYKKTCSSMK-MTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHII  240 (300)
Q Consensus       162 ~v~~K~~k~R~ipi~~~~~~~l~~y~~~~~~~~-~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~l  240 (300)
T Consensus       166 ~v~~Kg~K~R~vpl~~~~~~~l~~yl~~~r~~~~~~~~~~~lF~~~-~g~~l~~~~~~~~~~~~~~~agi~~~~~tpH~l  244 (296)
T PRK00283        166 RVTGKGNKERLVPLGEEAVYAIERYLERGRPALLGGRSSDALFPSA-RGGQLTRQTFWHRIKHYAKRAGIDPKKLSPHVL  244 (296)
T ss_pred             EEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             7717898036997088999999999998657751489997475428-898467999999999999980899998899878


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHH
Q ss_conf             8899999998588888999985589989989996459999999999828011
Q gi|255764498|r  241 RHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLA  292 (300)
Q Consensus       241 Rht~at~l~~~G~~~~~v~~~lGH~s~~tT~~Y~~~~~~~~~~~~~~~~p~~  292 (300)
T Consensus       245 RHt~at~ll~~G~~l~~i~~~LGHssi~TT~~Y~h~~~~~l~~~~~~~~p~~  296 (296)
T PRK00283        245 RHAFATHLLNHGADLRVVQELLGHSDISTTQIYTHVATERLKELHAQHHPRA  296 (296)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf             7999999998798999999882899889999988689999999999868499