HHsearch alignment for GI: 255764498 and conserved domain: PRK02436
>PRK02436 xerD site-specific tyrosine recombinase XerD-like protein; Reviewed.
Probab=100.00 E-value=0 Score=351.64 Aligned_cols=241 Identities=22% Similarity=0.304 Sum_probs=201.8
Q ss_pred CCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 96466413899999999999999999754499868899999999999999779984353221011233432100012222
Q gi|255764498|r 1 MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRK 80 (300)
Q Consensus 1 ~l~~~R~~S~~T~~~Y~~~l~~f~~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~ 80 (300)
T Consensus 7 ~l~~ek~lS~nTi~aY~~DL~~F~~fl~~------~i~~~~i~~y~~~L~--~~~~st~~Rklsslr~F~~fL~~~~~i~ 78 (247)
T PRK02436 7 PFLASKALSVNSQKSYRYDLQQFCQLVGE------RVNQTSLKLYQNSLA--NLKLSAQKRKLSAVNQFLYFLYQKKYLD 78 (247)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHH------HCCHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99998691499999999999999999873------589999999999987--1679999999999999999999768766
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 22122221212221112233202469999864320012561027765431100012210013433343200000111100
Q gi|255764498|r 81 DNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERT 160 (300)
Q Consensus 81 ~np~~~i~~~k~~~~~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~ 160 (300)
T Consensus 79 ~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~------------~~~~~r~i~~ll~~tGlRvSEl~~L~~~Did~~~~~ 145 (247)
T PRK02436 79 SFF-KLKETAKVMRSEKQQPEILDLSSFYQET------------PFPEGQLIALLILELGLTPSEIAGLKVADIDLDFQV 145 (247)
T ss_pred CCC-CHHCCCCCCCCCCCCCHHHHHHHHHCCC------------CCHHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCCE
T ss_conf 752-0420588988765413186799885646------------785689999999996947999978919991988787
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHH
Q ss_conf 01112221111100001247887532321001246777520012333222221111111012344201466764259885
Q gi|255764498|r 161 MIIQGKGNKERLVILSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHII 240 (300)
Q Consensus 161 i~v~~K~~k~R~ipi~~~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~l 240 (300)
T Consensus 146 i~v-~kg~k~R~Vpl~~~~~~~l~~y~~~--------~~~~l~~--~~g~~lsr~~~~~~lk~~~~~~g~~--~vtPH~L 212 (247)
T PRK02436 146 LTI-EKAGGKRVLPLPEALLPFLEQILNG--------KEVYLFE--HKGKPYSRQWFFNQLKSFVNSIGYP--GLTAQKL 212 (247)
T ss_pred EEE-ECCCEEEEEECCHHHHHHHHHHHHC--------CCCEEEC--CCCCCCCHHHHHHHHHHHHHHCCCC--CCCCHHH
T ss_conf 999-0799078754679999999998715--------8650116--8999667999999999999974999--9987100
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 88999999985888889999855899899899964
Q gi|255764498|r 241 RHAFASHLLEGGADLRTIQILLGHTDISTTQIYTH 275 (300)
Q Consensus 241 Rht~at~l~~~G~~~~~v~~~lGH~s~~tT~~Y~~ 275 (300)
T Consensus 213 RHsFAthlL~~Gadlr~vQeLLGH~sisTTqiY~k 247 (247)
T PRK02436 213 REQFILKQKEAGKSIYELARLLGLKTPVTLEKYYK 247 (247)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCC
T ss_conf 99999999987999999998808998788553069