HHsearch alignment for GI: 255764498 and conserved domain: PRK09871

>PRK09871 tyrosine recombinase; Provisional.
Probab=100.00  E-value=0  Score=299.11  Aligned_cols=192  Identities=28%  Similarity=0.339  Sum_probs=170.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCCCH
Q ss_conf             1223320246999986432001256102776543110001221001343334320000011110001112-221111100
Q gi|255764498|r   96 LPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQG-KGNKERLVI  174 (300)
Q Consensus        96 ~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~-K~~k~R~ip  174 (300)
T Consensus         3 ~~ryLt~~Ev~~Ll~a~~~--------~~~~~Rd~aii~ll~~tGlR~sEl~~L~~~Did~~~~~i~i~~~k~g~~~~~p   74 (198)
T PRK09871          3 KRRYLTGKEVQAMMQAVCY--------GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHP   74 (198)
T ss_pred             CCCCCCHHHHHHHHHCCCC--------CCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCEEEEEECCCCEEEEEE
T ss_conf             6676999999999844143--------98544899999999997868999978888775877996999978997489874


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             00124788753232100124677752001233322222111111101234420146676425988588999999985888
Q gi|255764498|r  175 LSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFASHLLEGGAD  254 (300)
Q Consensus       175 i~~~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~lRht~at~l~~~G~~  254 (300)
T Consensus        75 l~~~~~~~l~~~~~~r~~~~~~~~~~~lF~s-~~G~~ls~~~~~~~ik~~~~~aG~~~-~~~pH~LRHTfAt~Ll~~G~d  152 (198)
T PRK09871         75 LRFDEREAVERWTQERANWKGADRTDAIFIS-RRGSRLSRQQAYRIIRDAGIEAGTVT-QTHPHMLRHACGYELAERGAD  152 (198)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHCCCC
T ss_conf             8699999999999987775126778841435-88994799999999999999849998-889985579999999986999


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCC
Q ss_conf             8899998558998998999645999999999982801110011
Q gi|255764498|r  255 LRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEKK  297 (300)
Q Consensus       255 ~~~v~~~lGH~s~~tT~~Y~~~~~~~~~~~~~~~~p~~~~~~~  297 (300)
T Consensus       153 l~~Iq~lLGHssi~TT~~Yth~~~~~l~~~~~~~~p~~~~~~~  195 (198)
T PRK09871        153 TRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEKLKR  195 (198)
T ss_pred             HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf             9999999389977899998858999999999994961001000