HHsearch alignment for GI: 255764498 and conserved domain: PRK09871
>PRK09871 tyrosine recombinase; Provisional.
Probab=100.00 E-value=0 Score=299.11 Aligned_cols=192 Identities=28% Similarity=0.339 Sum_probs=170.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCCCH
Q ss_conf 1223320246999986432001256102776543110001221001343334320000011110001112-221111100
Q gi|255764498|r 96 LPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQG-KGNKERLVI 174 (300)
Q Consensus 96 ~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~-K~~k~R~ip 174 (300)
T Consensus 3 ~~ryLt~~Ev~~Ll~a~~~--------~~~~~Rd~aii~ll~~tGlR~sEl~~L~~~Did~~~~~i~i~~~k~g~~~~~p 74 (198)
T PRK09871 3 KRRYLTGKEVQAMMQAVCY--------GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHP 74 (198)
T ss_pred CCCCCCHHHHHHHHHCCCC--------CCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCEEEEEECCCCEEEEEE
T ss_conf 6676999999999844143--------98544899999999997868999978888775877996999978997489874
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 00124788753232100124677752001233322222111111101234420146676425988588999999985888
Q gi|255764498|r 175 LSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFASHLLEGGAD 254 (300)
Q Consensus 175 i~~~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~lRht~at~l~~~G~~ 254 (300)
T Consensus 75 l~~~~~~~l~~~~~~r~~~~~~~~~~~lF~s-~~G~~ls~~~~~~~ik~~~~~aG~~~-~~~pH~LRHTfAt~Ll~~G~d 152 (198)
T PRK09871 75 LRFDEREAVERWTQERANWKGADRTDAIFIS-RRGSRLSRQQAYRIIRDAGIEAGTVT-QTHPHMLRHACGYELAERGAD 152 (198)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHCCCC
T ss_conf 8699999999999987775126778841435-88994799999999999999849998-889985579999999986999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCC
Q ss_conf 8899998558998998999645999999999982801110011
Q gi|255764498|r 255 LRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEKK 297 (300)
Q Consensus 255 ~~~v~~~lGH~s~~tT~~Y~~~~~~~~~~~~~~~~p~~~~~~~ 297 (300)
T Consensus 153 l~~Iq~lLGHssi~TT~~Yth~~~~~l~~~~~~~~p~~~~~~~ 195 (198)
T PRK09871 153 TRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEKLKR 195 (198)
T ss_pred HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 9999999389977899998858999999999994961001000