HHsearch alignment for GI: 255764498 and conserved domain: cd01190
>cd01190 INT_SG5 INT_SG5, DNA breaking-rejoining enzymes, integrase/recombinases subgroup 5, N- and C-terminal domains. The CD contains mainly predicted bacterial integrase/recombinases.
Probab=90.79 E-value=0.3 Score=26.57 Aligned_cols=48 Identities=15% Similarity=0.191 Sum_probs=34.2
Q ss_pred CHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC------------C--------HHHCCHHHHHHHHHHH
Q ss_conf 6466413899999999999999999754499------------8--------6889999999999999
Q gi|255764498|r 2 MSSERASSINTLSAYKRDLKEMQNFLNNKEI------------S--------LSAASTNHLISYLNHL 49 (300)
Q Consensus 2 l~~~R~~S~~T~~~Y~~~l~~f~~~~~~~~~------------~--------~~~i~~~~i~~~~~~l 49 (300)
T Consensus 20 L~~~rg~s~~Tin~~l~~L~~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~l~~eei~~ll~~~ 87 (260)
T cd01190 20 LENDRGNSIRTRNARLAALHSFFRYAAREVPEHLPTIQRVLAIPMKRFKRPLVTYLTREEVQALLAAP 87 (260)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 99846999999999999999999999980840145537101488788899999889999999998186