HHsearch alignment of GI: 255764498 and MMDB domain: 1ae9_A_
>1ae9_A (A:) Lambda integrase; DNA recombination, site-specific recombination; 1.90A {Bacteriophage lambda}
Probab=99.90 E-value=9.3e-26 Score=168.70 Aligned_cols=172 Identities=15% Similarity=0.084 Sum_probs=107.1
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHH-
Q ss_conf 2233202469999864320012561027765431100012210013433343200000111100011122211111000-
Q gi|255764498|r 97 PKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVIL- 175 (300)
Q Consensus 97 ~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~K~~k~R~ipi- 175 (300)
+++|+++|+.++++++... ..|+++++.++++||||+||+++|+|+||+++++.+.+..+..+....+.
T Consensus 1 kr~lt~~ei~~l~~~~~~~----------~~~~~~~~~l~~~tGlR~~Ei~~L~~~di~~~~~~~~~~~~~~~~~~~~~~ 70 (179)
T 1ae9_A 1 RSRLTADEYLKIYQAAESS----------PCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTAL 70 (179)
T ss_dssp CCCCCHHHHHHHHHHGGGS----------CHHHHHHHHHHHHHCCCHHHHHHCBGGGEETTEEEEECTTTCCEEEEETTC
T ss_pred CCCCCHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCCCCCCCCCCCEEEECCCH
T ss_conf 9989999999999988668----------899999999999977891444025022553101222134654314303651
Q ss_pred --HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf --012478875323210012467775200123332222211111110123442014667642598858899999998588
Q gi|255764498|r 176 --SPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFASHLLEGGA 253 (300)
Q Consensus 176 --~~~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~lRht~at~l~~~G~ 253 (300)
.............. .... .....+.........................+......++|.+||++++.+.++|+
T Consensus 71 ~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~ 146 (179)
T 1ae9_A 71 HIDALGISMKETLDKC--KEIL--GGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQI 146 (179)
T ss_dssp EEGGGTEEHHHHHHHH--HHHT--CCSBSSCCTTSCCCCHHHHHHHHHHHHHHHTCCCSSSCCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCC--CCCC--CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 6677777544332101--2457--65313432157876532136666666531123445430268899888999999499
Q ss_pred CHHHHHHHHCCCCHHHHHHHHHCCHHHHH
Q ss_conf 88899998558998998999645999999
Q gi|255764498|r 254 DLRTIQILLGHTDISTTQIYTHLLPDKLQ 282 (300)
Q Consensus 254 ~~~~v~~~lGH~s~~tT~~Y~~~~~~~~~ 282 (300)
|+..||++|||+|++||++|+|++.+.++
T Consensus 147 ~~~~i~~~lGH~~~~tT~~Y~~~~~~~~~ 175 (179)
T 1ae9_A 147 SDKFAQHLLGHKSDTMASQFRDDRGREWD 175 (179)
T ss_dssp CHHHHHHHHTC--------CEECSSCEEE
T ss_pred CHHHHHHHHCCCCHHHHHHHHHCCHHHHH
T ss_conf 99999999389999999998736787686