HHsearch alignment of GI: 255764498 and MMDB domain: 1z19_A_94-283
>1z19_A (A:94-283) Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 2.80A {Enterobacteria phage lambda} PDB: 1p7d_A*
Probab=99.91 E-value=5.5e-27 Score=175.85 Aligned_cols=182 Identities=14% Similarity=0.053 Sum_probs=117.4
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 21222111223320246999986432001256102776543110001221001343334320000011110001112221
Q gi|255764498|r 89 LPKKNHILPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGN 168 (300)
Q Consensus 89 ~~k~~~~~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~K~~ 168 (300)
.|+.++..+++++++|+.++++.+... ..++++++.++++||||+||+++|+|+||++++..+.+..++.
T Consensus 3 k~k~~~~~~~~lt~ee~~~l~~~~~~~----------~~~~~~~~~l~~~tG~R~~El~~l~~~di~~~~~~~~i~~~~~ 72 (190)
T 1z19_A 3 RAAKSKVRRSRLTADEYLKIYQAAESS----------PCWLRLAXELAVVTGQRVGDLCEXKWSDIVDGYLYVEQSKTGV 72 (190)
T ss_dssp CCCCCCCCCCCCCHHHHHHHHHHGGGS----------CHHHHHHHHHHHHSCCCHHHHTTCBGGGEETTEEEEECTTTCC
T ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCHH----------HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCC
T ss_conf 122222222333036676420221002----------2788999999998076533445454202312420000146785
Q ss_pred CC-CCCH--HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC-CCCCCCCCHHHHHHHH
Q ss_conf 11-1100--001247887532321001246777520012333222221111111012344201-4667642598858899
Q gi|255764498|r 169 KE-RLVI--LSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARA-GIQKKNISPHIIRHAF 244 (300)
Q Consensus 169 k~-R~ip--i~~~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~-gi~~~~~t~H~lRht~ 244 (300)
+. ..++ ........+..+... . ......++|.... +.+.........+....... +......++|.+||++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 147 (190)
T 1z19_A 73 KIAIPTALHIDALGISXKETLDKC-K---EILGGETIIASTR-REPLSSGTVSRYFXRARKASGLSFEGDPPTFHELRSL 147 (190)
T ss_dssp EEEEETTCEETTTTEEHHHHHHHH-H---HHHCSSBSSCCTT-SSCCCHHHHHHHHHHHHHHTTCCCSSSCCCGGGHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHH-H---CCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf 133113630146788888888764-0---2577642012111-2110026777899999998477767899973849999
Q ss_pred HHHHHHCCCCHHHHHHHHCCCCHHHHHH-HHHCCHHHHHHHH
Q ss_conf 9999985888889999855899899899-9645999999999
Q gi|255764498|r 245 ASHLLEGGADLRTIQILLGHTDISTTQI-YTHLLPDKLQKLV 285 (300)
Q Consensus 245 at~l~~~G~~~~~v~~~lGH~s~~tT~~-Y~~~~~~~~~~~~ 285 (300)
||+|+++|+|+..||++|||+|++||+. |.|++.+.+++++
T Consensus 148 a~~l~~~g~~~~~i~~~lGH~~~~~T~~~Y~~~~~~~~~~a~ 189 (190)
T 1z19_A 148 SARLYEKQISDKFAQHLLGHKSDTXASQXRDDRGREWDKIEI 189 (190)
T ss_dssp HHHHHHHHTCHHHHHHHHTCSSSCC----------CCCCCCC
T ss_pred HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC
T ss_conf 999998698999999994899889999985274858999864