HHsearch alignment of GI: 255764498 and MMDB domain: 2kj9_A_
>2kj9_A (A:) Integrase; DNA_BRE_C superfamily, INTB, PSI-2, structural genomics, protein structure initiative; NMR {Pectobacterium atrosepticum}
Probab=99.14 E-value=2.3e-11 Score=84.97 Aligned_cols=94 Identities=10% Similarity=0.034 Sum_probs=79.4
Q ss_pred CCHHHHHCCHHHHHHHHHHHHHHH-HHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 964664138999999999999999-9975449986889999999999999977998435322101123343210001222
Q gi|255764498|r 1 MMSSERASSINTLSAYKRDLKEMQ-NFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLR 79 (300)
Q Consensus 1 ~l~~~R~~S~~T~~~Y~~~l~~f~-~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~ 79 (300)
+|...+++|++|+..|.+.+..++ .+++ +.++.+++..++..|++.+.+. .+++|+++.++.|+++|+||++.|++
T Consensus 20 ~l~~~~~~~~~T~~~~~~~~~~~i~~~~g--~~~i~~it~~~i~~~~~~~~~~-~s~~t~~~~~~~l~~if~~Av~~~~i 96 (118)
T 2kj9_A 20 WFATKTTWSEDYQRSVWTRLETYLFPDIG--NKDIAELDTGDLLVPIKKIEKL-GYLEIAMRVKQYATAIMRYAVQQKMI 96 (118)
T ss_dssp HHHTCCSSCHHHHHHHHHHHHHTSSTTGG--GSBGGGCCHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99987888887999999999988789867--8859995589999999999990-79288999999999999999987881
Q ss_pred CCCCCCCCCCCCCCCCCC
Q ss_conf 222122221212221112
Q gi|255764498|r 80 KDNPSDTLELPKKNHILP 97 (300)
Q Consensus 80 ~~np~~~i~~~k~~~~~~ 97 (300)
+.||+.++..|+......
T Consensus 97 ~~NP~~~v~~~k~~~~~~ 114 (118)
T 2kj9_A 97 RFNPAYDLEGAVQKLEHH 114 (118)
T ss_dssp SSCHHHHCCSCSSSSSSC
T ss_pred CCCCHHHHHHHCCCCCCC
T ss_conf 218488898766898655