HHsearch results for GI: 255764498 and protein with PDBid: 1ae9_A

>1ae9_A Lambda integrase; DNA recombination, site-specific recombination; 1.90A {Enterobacteria phage lambda} SCOP: d.163.1.1
Probab=99.88  E-value=2.5e-24  Score=159.55  Aligned_cols=168  Identities=19%  Similarity=0.108  Sum_probs=120.0

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             23320246999986432001256102776543110001221001343334320000011110001112221111100001
Q gi|255764498|r   98 KTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSP  177 (300)
Q Consensus        98 ~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~K~~k~R~ipi~~  177 (300)
                      +.||.||+.++++++....        .  +.++++.|++.||||++|+++|+|+||+.+...+ +..|+++.+.+|+.+
T Consensus         2 ~~lt~eE~~~l~~~~~~~~--------~--~~~~~~~l~~~TG~R~~E~~~L~~~di~~~~~~~-~~~k~~~~~~~~~~~   70 (179)
T 1ae9_A            2 SRLTADEYLKIYQAAESSP--------C--WLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYV-EQSKTGVKIAIPTAL   70 (179)
T ss_dssp             CCCCHHHHHHHHHHGGGSC--------H--HHHHHHHHHHHHCCCHHHHHHCBGGGEETTEEEE-ECTTTCCEEEEETTC
T ss_pred             CCCCHHHHHHHHHHHHHCC--------H--HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-EECCCCEEEEEECCH
T ss_conf             9999999999999875688--------9--9999999999975759999836201033401478-742553034554668


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC--CCCCCHHHHHHHHHHHHHHCCCCH
Q ss_conf             247887532321001246777520012333222221111111012344201466--764259885889999999858888
Q gi|255764498|r  178 SALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQ--KKNISPHIIRHAFASHLLEGGADL  255 (300)
Q Consensus       178 ~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~--~~~~t~H~lRht~at~l~~~G~~~  255 (300)
                      .....+..+..............+++.. ..+.++...+....+.++.+.++..  ...+++|++||++++ ++++|+|+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~g~~~  148 (179)
T 1ae9_A           71 HIDALGISMKETLDKCKEILGGETIIAS-TRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSAR-LYEKQISD  148 (179)
T ss_dssp             EEGGGTEEHHHHHHHHHHHTCCSBSSCC-TTSCCCCHHHHHHHHHHHHHHHTCCCSSSCCCTTHHHHHHHH-HHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-HHHCCCCH
T ss_conf             8999999998877531135776411103-577754442047899999999852356540148789999999-99959999


Q ss_pred             HHHHHHHCCCCHHHHHHHHHCCH
Q ss_conf             89999855899899899964599
Q gi|255764498|r  256 RTIQILLGHTDISTTQIYTHLLP  278 (300)
Q Consensus       256 ~~v~~~lGH~s~~tT~~Y~~~~~  278 (300)
                      ..||+++||+|++||++|.+...
T Consensus       149 ~~i~~~~GH~s~~~t~~Y~~~~~  171 (179)
T 1ae9_A          149 KFAQHLLGHKSDTMASQFRDDRG  171 (179)
T ss_dssp             HHHHHHHTC--------CEECSS
T ss_pred             HHHHHHHCCCCHHHHHHHHHCCH
T ss_conf             99999838999999999985667