HHsearch results for GI: 255764498 and protein with PDBid: 1ae9_A
>1ae9_A Lambda integrase; DNA recombination, site-specific recombination; 1.90A {Enterobacteria phage lambda} SCOP: d.163.1.1
Probab=99.88 E-value=2.5e-24 Score=159.55 Aligned_cols=168 Identities=19% Similarity=0.108 Sum_probs=120.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 23320246999986432001256102776543110001221001343334320000011110001112221111100001
Q gi|255764498|r 98 KTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSP 177 (300)
Q Consensus 98 ~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~K~~k~R~ipi~~ 177 (300)
+.||.||+.++++++.... . +.++++.|++.||||++|+++|+|+||+.+...+ +..|+++.+.+|+.+
T Consensus 2 ~~lt~eE~~~l~~~~~~~~--------~--~~~~~~~l~~~TG~R~~E~~~L~~~di~~~~~~~-~~~k~~~~~~~~~~~ 70 (179)
T 1ae9_A 2 SRLTADEYLKIYQAAESSP--------C--WLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYV-EQSKTGVKIAIPTAL 70 (179)
T ss_dssp CCCCHHHHHHHHHHGGGSC--------H--HHHHHHHHHHHHCCCHHHHHHCBGGGEETTEEEE-ECTTTCCEEEEETTC
T ss_pred CCCCHHHHHHHHHHHHHCC--------H--HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-EECCCCEEEEEECCH
T ss_conf 9999999999999875688--------9--9999999999975759999836201033401478-742553034554668
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC--CCCCCHHHHHHHHHHHHHHCCCCH
Q ss_conf 247887532321001246777520012333222221111111012344201466--764259885889999999858888
Q gi|255764498|r 178 SALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQ--KKNISPHIIRHAFASHLLEGGADL 255 (300)
Q Consensus 178 ~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~--~~~~t~H~lRht~at~l~~~G~~~ 255 (300)
.....+..+..............+++.. ..+.++...+....+.++.+.++.. ...+++|++||++++ ++++|+|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~g~~~ 148 (179)
T 1ae9_A 71 HIDALGISMKETLDKCKEILGGETIIAS-TRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSAR-LYEKQISD 148 (179)
T ss_dssp EEGGGTEEHHHHHHHHHHHTCCSBSSCC-TTSCCCCHHHHHHHHHHHHHHHTCCCSSSCCCTTHHHHHHHH-HHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-HHHCCCCH
T ss_conf 8999999998877531135776411103-577754442047899999999852356540148789999999-99959999
Q ss_pred HHHHHHHCCCCHHHHHHHHHCCH
Q ss_conf 89999855899899899964599
Q gi|255764498|r 256 RTIQILLGHTDISTTQIYTHLLP 278 (300)
Q Consensus 256 ~~v~~~lGH~s~~tT~~Y~~~~~ 278 (300)
..||+++||+|++||++|.+...
T Consensus 149 ~~i~~~~GH~s~~~t~~Y~~~~~ 171 (179)
T 1ae9_A 149 KFAQHLLGHKSDTMASQFRDDRG 171 (179)
T ss_dssp HHHHHHHTC--------CEECSS
T ss_pred HHHHHHHCCCCHHHHHHHHHCCH
T ss_conf 99999838999999999985667