HHsearch results for GI: 255764498 and protein with PDBid: 2h7g_X
>2h7g_X DNA topoisomerase 1; type IB topoisomerase, DNA binding, protein-DNA complex, isomerase/DNA complex; HET: DNA; 1.90A {Variola virus} PDB: 2h7f_X* 3igc_A* 1a41_A
Probab=97.07 E-value=0.0017 Score=38.27 Aligned_cols=124 Identities=17% Similarity=0.222 Sum_probs=75.3
Q ss_pred HHCCCHHHHHCCCCCC-----------CCCCCHHHHHHHHHCCCC--CCCCCCCCCCHH--HHHHHHHHHHHHHHHCCCC
Q ss_conf 1100012210013433-----------343200000111100011--122211111000--0124788753232100124
Q gi|255764498|r 130 FLLIELLYATGMRVSE-----------LVTLSAHTLNLTERTMII--QGKGNKERLVIL--SPSALHALQMYKKTCSSMK 194 (300)
Q Consensus 130 ~~il~ll~~tGlR~~E-----------i~~L~~~di~~~~~~i~v--~~K~~k~R~ipi--~~~~~~~l~~y~~~~~~~~ 194 (300)
.+++.|+-.|.+|+|- ++.|+..+|.++++.+.+ .||.|+.+.+-| .+.+...|.... .
T Consensus 118 A~~v~Lld~~~iRVGne~Ya~~N~SyGlTTLr~rHV~v~g~~i~f~F~GK~Gv~~~~~i~~d~~l~~~l~~~~------~ 191 (314)
T 2h7g_X 118 AVFMLMETMFFIRFGKMKYLKENETVGLLTLKNKHIEISPDKIVIKFVGKDKVSHEFVVHKSNRLYKPLLKLT------D 191 (314)
T ss_dssp HHHHHHHHHHCCCCCCHHHHHHHCCCCSTTCBGGGEEEETTEEEEEEECGGGCEEEEEEETTSTTHHHHHHHC------C
T ss_pred HHHHHHHHHHCEECCCHHHHHCCCCCCEEEEECCCEEEECCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHH------H
T ss_conf 9999999862241577432220598150020101177879979999875888458999626589999999997------5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC--------CC-----------CH
Q ss_conf 677752001233322222111111101234420146676425988588999999985--------88-----------88
Q gi|255764498|r 195 MTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFASHLLEG--------GA-----------DL 255 (300)
Q Consensus 195 ~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~lRht~at~l~~~--------G~-----------~~ 255 (300)
.++...++|-. ++.+.++..++ .. .+|..+||--.||.++.. .. -+
T Consensus 192 ~~~~~~~lf~~------v~~~~vn~~l~----~~-----~~taKdFRTw~at~~a~~~l~~~~~~~~~~~~~kk~i~~~i 256 (314)
T 2h7g_X 192 DSSPEEFLFNK------LSERKVYESIK----QF-----GIRIKDLRTYGVNYTFLYNFWTNVKSISPLPSPKKLIALTI 256 (314)
T ss_dssp TTCTTSBSSTT------CCHHHHHHHHG----GG-----TSCHHHHHHHHHHHHHHHHHHHHHHHCSSCCCHHHHHHHHH
T ss_pred CCCCHHEEEEE------CCCHHHHHHHH----HC-----CCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 57810157544------46267899888----35-----84078898646259999999851676675678899999999
Q ss_pred HHHHHHHCCCCHHHHH-HHHH
Q ss_conf 8999985589989989-9964
Q gi|255764498|r 256 RTIQILLGHTDISTTQ-IYTH 275 (300)
Q Consensus 256 ~~v~~~lGH~s~~tT~-~Y~~ 275 (300)
..|++.|||+- ++.. -|+|
T Consensus 257 ~~vA~~LgNTp-aVcR~sYIh 276 (314)
T 2h7g_X 257 KQTAEVVGHTP-SISKRAYMA 276 (314)
T ss_dssp HHHHHHHTCCT-TTHHHHSTH
T ss_pred HHHHHHHCCCH-HHHHHHCCC
T ss_conf 99999838975-555674579