HHsearch results for GI: 255764498 and protein with PDBid: 2khq_A
>2khq_A Integrase; all-alpha, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Staphylococcus saprophyticus subsp}
Probab=99.14 E-value=1e-10 Score=80.33 Aligned_cols=83 Identities=20% Similarity=0.217 Sum_probs=75.3
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 41389999999999999999975449986889999999999999977998435322101123343210001222222122
Q gi|255764498|r 6 RASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRKDNPSD 85 (300)
Q Consensus 6 R~~S~~T~~~Y~~~l~~f~~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~~np~~ 85 (300)
.+++++|+..|...++.+..+++ +..+.+++..++++|+..+.+ +.+++|+++.++.|+++|+||+..|++..||+.
T Consensus 18 ~~~~~~T~~~y~~~~~~i~~~~g--~~~l~~it~~~i~~~~~~l~~-~~s~~t~~~~~~~l~~~~~~Av~~~~i~~NP~~ 94 (110)
T 2khq_A 18 PHVSESTKRHYESAYKHIKDHFR--HKLLKDIKRTEYQKFLNEYGL-THSYETIRKLNSYIRNAFDDAIHEGYVIKNPTY 94 (110)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHCS--SCBGGGCCHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHHHHTTCCCCCGGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHC--CCCHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 77899999999999999999967--460400789999999999986-412899999999999999999988791019876
Q ss_pred CCCCCC
Q ss_conf 221212
Q gi|255764498|r 86 TLELPK 91 (300)
Q Consensus 86 ~i~~~k 91 (300)
+++.+.
T Consensus 95 ~vkl~~ 100 (110)
T 2khq_A 95 KAELHA 100 (110)
T ss_dssp GCCCCC
T ss_pred CCEECC
T ss_conf 877572